CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number
NZ_LR594691	Variovorax sp. WDL1 plasmid 3	5 crisprs	Cas9_archaeal	0	10	1
NZ_LR594692	Variovorax sp. WDL1 plasmid 4	0 crisprs	RT,PD-DExK	0	0	2
NZ_LR594693	Variovorax sp. WDL1 plasmid 5	0 crisprs	NA	0	0	1
NZ_LR594690	Variovorax sp. WDL1 plasmid 2	5 crisprs	DinG,c2c9_V-U4,WYL,cas6e,cas5,cas7,cse2gr11,cas8e,cas2,cas1,cas3,csa3,DEDDh,c2c8_V-U2	0	34	2
NZ_LR594689	Variovorax sp. WDL1 chromosome 1	2 crisprs	PD-DExK,DEDDh,DinG,WYL,csa3,cas3	1	0	4
NZ_LR594694	Variovorax sp. WDL1 plasmid 6	0 crisprs	NA	0	0	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

6394 : 16158

Bacillus_phage(50.0%)

integrase,transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_068682758.1\|6394_8335_+\|integrase	tyrosine-type recombinase/integrase	A0A1D8EVX7	Mycobacterium_phage	8.6e-06	28.1
WP_146039730.1\|9375_10347_-\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	1.3e-39	37.5
WP_068685009.1\|10675_12214_+\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	1.1e-45	35.8
WP_031652704.1\|12494_13301_-	ATP-binding protein	A0A059NT77	Lactococcus_phage	1.1e-31	35.5
WP_063599743.1\|13290_14856_-\|transposase	IS21-like element ISPpn1 family transposase	A0A2L1IVA1	Escherichia_phage	9.0e-14	26.4
WP_146039730.1\|15186_16158_+\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	1.3e-39	37.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_LR594690

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CRISPR-Cas detection and classification

Crispr_ID: NZ_LR594690_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR594690_1

2359-2489

Orphan

Consensus_repeat	Method
ATTCCCTGGGACAGAGTTACCCCGCAGCGACGCATTTTCGA	CRISPRCasFinder

1 spacers

DinG

The CRISPR arrays of NZ_LR594690_1

>merge|NZ_LR594690|1|2359-2489|CRISPRCasFinder
ATTCCCTGGGACAGAGTTACCCCGCAGCGACGCATTTTCGACTTCCAGCAGCAGCGTGACGGCGTCTTGTCCCTAGTAGGGACAAACTAAATTCCCTGGGACAGAGTCACCCCGCAGCGACGCATTTTCGA

>NZ_LR594690|1|1|2359-2489|CRISPRCasFinder
ATTCCCTGGGACAGAGTTACCCCGCAGCGACGCATTTTCGA	CTTCCAGCAGCAGCGTGACGGCGTCTTGTCCCTAGTAGGGACAAACTAA
ATTCCCTGGGACAGAGTCACCCCGCAGCGACGCATTTTCGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR594690.1\|WP_068673576.1\|7682_8042_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594690.1\|WP_068673572.1\|8776_9085_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594690.1\|WP_162487200.1\|0_1257_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|274585
NZ_LR594690.1\|WP_068673586.1\|2718_3432_-\|DNA-binding-protein	unknown	unknown	gnl\|CDD\|378704
NZ_LR594690.1\|WP_068673584.1\|3829_5977_+\|DEAD/DEAH-box-helicase-family-protein	DinG	COG1199_DinG_CAS-IV-A	gnl\|CDD\|236966
NZ_LR594690.1\|WP_068673580.1\|6449_7076_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|239317
NZ_LR594690.1\|WP_068673574.1\|8057_8642_+\|lytic-transglycosylase-domain-containing-protein	unknown	unknown	gnl\|CDD\|381603
NZ_LR594690.1\|WP_068673568.1\|9469_10060_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377500
NZ_LR594690.1\|WP_146039477.1\|6033_6453_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237030
NZ_LR594690.1\|WP_068673570.1\|9158_9452_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377786
NZ_LR594690.1\|WP_068673578.1\|7080_7572_+\|OmpA-family-protein	unknown	unknown	gnl\|CDD\|143586
NZ_LR594690.1\|WP_083944121.1\|1261_2230_+\|ParB/RepB/Spo0J-family-partition-protein	unknown	unknown	gnl\|CDD\|214678

Protein	Function_ID	Function_description	E-value
NZ_LR594690.1\|WP_068673574.1\|8057_8642_+\|lytic-transglycosylase-domain-containing-protein	gnl\|CDD\|381603	cd13400, LT_IagB-like, Escherichia coli invasion protein IagB and similar proteins. Lytic transglycosylase-like protein, similar to Escherichia coli invasion protein IagB. IagB is encoded within a pathogenicity island in Salmonella enterica and has been shown to degrade polymeric peptidoglycan. IagB-like invasion proteins are implicated in the invasion of eukaryotic host cells by bacteria. Lytic transglycosylase (LT) catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Members of this family resemble the soluble and insoluble membrane-bound LTs in bacteria and the LTs in bacteriophage lambda.	3.7572e-29
NZ_LR594690.1\|WP_068673568.1\|9469_10060_+\|hypothetical-protein	gnl\|CDD\|377500	pfam05309, TraE, TraE protein. This family consists of several bacterial sex pilus assembly and synthesis proteins (TraE). Conjugal transfer of plasmids from donor to recipient cells is a complex process in which a cell-to-cell contact plays a key role. Many genes encoded by self-transmissible plasmids are required for various processes of conjugation, including pilus formation, stabilisation of mating pairs, conjugative DNA metabolism, surface exclusion and regulation of transfer gene expression. The exact function of the TraE protein is unknown.	9.86058e-19
NZ_LR594690.1\|WP_162487200.1\|0_1257_+\|AAA-family-ATPase	gnl\|CDD\|274585	TIGR03453, partition_RepA, plasmid partitioning protein RepA. Members of this family are the RepA (or ParA) protein involved in replicon partitioning. All known examples occur in bacterial species with two or more replicons, on a plasmid or the smaller chromosome. Note that an apparent exception may be seen as a pseudomolecule from assembly of an incompletely sequenced genome. Members of this family belong to a larger family that also includes the enzyme cobyrinic acid a,c-diamide synthase, but assignment of that name to members of this family would be in error. [Mobile and extrachromosomal element functions, Plasmid functions].	2.39665e-46
NZ_LR594690.1\|WP_068673578.1\|7080_7572_+\|OmpA-family-protein	gnl\|CDD\|143586	cd07185, OmpA_C-like, Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA. OmpA-like domains (named after the C-terminal domain of Escherichia coli OmpA protein) have been shown to non-covalently associate with peptidoglycan, a network of glycan chains composed of disaccharides, which are crosslinked via short peptide bridges. Well-studied members of this family include the Escherichia coli outer membrane protein OmpA, the Escherichia coli lipoprotein PAL, Neisseria meningitdis RmpM, which interact with the outer membrane, as well as the Escherichia coli motor protein MotB, and the Vibrio flagellar motor proteins PomB and MotY, which interact with the inner membrane.	1.05463e-08
NZ_LR594690.1\|WP_068673570.1\|9158_9452_+\|hypothetical-protein	gnl\|CDD\|377786	pfam07178, TraL, TraL protein. This family consists of several bacterial TraL proteins. TraL is a predicted peripheral membrane protein which is thought to be involved in bacterial sex pilus assembly. The exact function of this family is unclear.	0.00171284
NZ_LR594690.1\|WP_146039477.1\|6033_6453_+\|hypothetical-protein	gnl\|CDD\|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	0.000849215
NZ_LR594690.1\|WP_068673580.1\|6449_7076_+\|hypothetical-protein	gnl\|CDD\|239317	cd03019, DsbA_DsbA, DsbA family, DsbA subfamily; DsbA is a monomeric thiol disulfide oxidoreductase protein containing a redox active CXXC motif imbedded in a TRX fold. It is involved in the oxidative protein folding pathway in prokaryotes, and is the strongest thiol oxidant known, due to the unusual stability of the thiolate anion form of the first cysteine in the CXXC motif. The highly unstable oxidized form of DsbA directly donates disulfide bonds to reduced proteins secreted into the bacterial periplasm. This rapid and unidirectional process helps to catalyze the folding of newly-synthesized polypeptides. To regain catalytic activity, reduced DsbA is then reoxidized by the membrane protein DsbB, which generates its disulfides from oxidized quinones, which in turn are reoxidized by the electron transport chain.	2.52036e-11
NZ_LR594690.1\|WP_068673586.1\|2718_3432_-\|DNA-binding-protein	gnl\|CDD\|378704	pfam11740, KfrA_N, Plasmid replication region DNA-binding N-term. The broad host-range plasmid RK2 is able to replicate in and be inherited in a stable manner in diverse Gram-negative bacterial species. It encodes a number of co-ordinately regulated operons including a central control korF1 operon that represses the kfrA operon. The KfrA polypeptide is a site-specific DNA-binding protein whose operator overlaps the kfrA promoter. The N-terminus, containing an helix-turn-helix motif, is essential for function. Downstream from this family is an extended coiled-coil domain containing a heptad repeat segment which is probably responsible for formation of multimers, and may provide an example of a bridge to host structures required for plasmid partitioning.	8.14638e-05
NZ_LR594690.1\|WP_068673584.1\|3829_5977_+\|DEAD/DEAH-box-helicase-family-protein	gnl\|CDD\|236966	PRK11747, dinG, ATP-dependent DNA helicase DinG; Provisional.	3.56093e-159
NZ_LR594690.1\|WP_083944121.1\|1261_2230_+\|ParB/RepB/Spo0J-family-partition-protein	gnl\|CDD\|214678	smart00470, ParB, ParB-like nuclease domain. Plasmid RK2 ParB preferentially cleaves single-stranded DNA. ParB also nicks supercoiled plasmid DNA preferably at sites with potential single-stranded character, like AT-rich regions and sequences that can form cruciform structures. ParB also exhibits 5-->3 exonuclease activity.	3.14549e-10

>NZ_LR594690.1|WP_083944121.1|1261_2230_+|ParB/RepB/Spo0J-family-partition-protein
MATKGREQLSAISDAVLSGPTSPAMVRQRPLPAPTQLMNLTGGHLESKAEIERLKKEQGKALVIRLDLCDDGPFHSSPLDPVRVANLKANLKENPQTTPAQLRPAAAGRFQILAGRHRKAALLELGREEWLVTIREASDDEAERVTFYDNLLAPQLTDYAKYLGLAQRKASRSFTVRELETESGLSKSQVARLLSFERLPAAARQLVASKPSVIGANVVELLAALAKDHGDRVVQAVELVVEGKLKASKAPAWVTAPPKEKNAERRRQPSTDLAVDGTRYVRIRRRDGLLSMAFTSAQEADELERIITELIKDRIAKLKSLS
>NZ_LR594690.1|WP_162487200.1|0_1257_+|AAA-family-ATPase
MDSAIEDGLADKLPVSLVSSRVTMEDITALGERLEIQTARLKEYLFSGTAKKAPEFNATKLAELCGRSRDQMLRLLDRGLEPGLSDGIKGKADGGSERNRRFTLSEARAWVKATRKPGRPPGLPGATITVANFKGGVSKTVTAMSTAQALSLKGYDVLCIDYDPQGSMSALFGLTPGFIPESETVLPLMMHATSEIARDTLQESIQATYWDGIDLVPASHAIAQGEFYLPLRQLEANNRGEEFKFWDVLNKALDAGIREQYDYIIIDTPPALSYMNMTTIWAADALLLPLPPEGIDFVSSAQFWTMLSELSTGLALGQKDFAWVAAVPSKVNHQRMYTKEILKWMQGSYGDMLTQTEIPDTAAVGMEGAKYSTVYDVERYAGSAKTLSRARDAYDKLVDEIDFMTRRKVWQIPATEQE
>NZ_LR594690.1|WP_068673586.1|2718_3432_-|DNA-binding-protein
MAATPSDTRKRVREIADQLLAAGTAPTSTLVRKLLGKGSFETIVGELKLWEADRQRPLPNKRDPTAEALDRVGAQQAAELIAQAADASKSLTAAVASVRLAASEIASFPALVATLTEQVRALTQVVEDDRKAMRDELAKANARYEGVQKYAMTAIEAARAESRMLQEQLAQTGDKTGARESAYRQQAEDLRVLVHQLQGRLAEQGKRSDDVVVPPRLDFDQKRPVRLSSYEPTGRTT
>NZ_LR594690.1|WP_068673584.1|3829_5977_+|DEAD/DEAH-box-helicase-family-protein
MGQVIPIANASRLESSDAAFTFIDECYERLGQLPGFIVRDGQVELSRQVCRAMVADEPIAAEAPTGTGKTIAYLVGAIAASEKLRTTKEVPVVIATATVGLQTQIMQGDLPTLVKARIVQSERDAVVAKGRGRYFCVNSAERISNQGDAENQFDFFDQGSNENVDVSVDVKSMLDHWRGGAWNGDVDSYPDKTPGSWKEVAAKSETCLGHKCEFHSECPFLASRRVLSEAKIIVANHDLVLADLAMAKESPTDALFPGGRYLLVFDEAHHLPDKAIDVGSANLVLDDCVANLGRMAGFSKGWQRKGELVRLFEKAKLSAHDFDTGGLVNGLAGLKDSLSTITVEPETNQYRFPAGKLDTSVLKAATHALDHARLLQESIKEASAALKKTNLPEKSPELKGPIGELLYQCAFFGSQLSSIVKGLELFSAPDRAVRWVFKGGTPEVASIHVSPLEGADVLRRLLWDSERAIVAMVSATLQDFDGFDRFRARVGVGDVLRTMKLDPIFPYRNNTIELIDMKYSPRQDEREKYIEELQLNMPANIDASEGTLILFPSRSLMNALLPTLNKHFGNAVLAQGDLGIKELIHEHKDRIDRGRGSILCGLATMAEGLDLPGAYCVNVIICAIPFAVPTSPVEQELAEVLGKEYFAQRAMPDALTKLIQMVGRLMRRESDRGRIVVFDKRLIYTQWGRKMLEALPGFRKRSMPALRLPRPVAVK
>NZ_LR594690.1|WP_146039477.1|6033_6453_+|hypothetical-protein
MTCPQGLPLMLHKEFFGLIFLAFVAWIFLAASPEKRIERGCAPIAWVGNATTSLSSLVVPSQQTKVQGWFNNLGYGCRYVTWRLIYQDAYNEWLATQGLSPDAKKPADDAAANPAQKAASAPASSTPAAPAAPAAPEKK
>NZ_LR594690.1|WP_068673580.1|6449_7076_+|hypothetical-protein
MTKKRRHFLQAVGLAWACALMLPSLASAAPTVDVVKIMSFSCPVCRAAEAQDVAIESAVKAVGGSFVRGPVPVDPAESGAKERVYYAARGVSPAVADTIKNAIYRGAQDLSIPLGEENQVLVWLQQQLGDMPEKDLTALFEASRGPRGKGALSRAATLAVSVGVESLPAYVIVVDGRPVSSVDPTSVPGGSLTRLRDEVISKVKTLAK
>NZ_LR594690.1|WP_068673578.1|7080_7572_+|OmpA-family-protein
MPMIEVPAHVQHENVRQNHIDVVGGTNWDLSRSAVETPITPLPDPVPLPPLEPTNGYQAAHAMPVEGATVIVDFAKNSVLISKQTAAELRGLHKKSTVLVAGHAGAGEKNPAKLAQRRAQAVAANLKRRGHRVEAVRSFSSEVPRSHTSEGASLNQRVEVFER
>NZ_LR594690.1|WP_068673576.1|7682_8042_+|hypothetical-protein
MIHDLFIVGEIRKITVSTPKDPKKGASAVLMVQWGPVREQSGGVVDFINAGQVRIPNYRFPKLQDRLKVGQTVKINGHIQGVVKTLDADQFLSNELVADRVFILDEPSTPAEAAAAAAE
>NZ_LR594690.1|WP_068673574.1|8057_8642_+|lytic-transglycosylase-domain-containing-protein
MDGIPSLPPYAHVTREAVQCAAQASLRYDVPELLLHAILRKENGRVGASSKNRDGSFDLGPAQVNTKWVEYFAKFGLRKEHLRDDFCTNINASAYIIRDNFNKKRDWFNAIVAYNIGPNNWTPNRYRIGHKYASDVIGFWWGFQNYVDAQRGIRRTADGTPTAAATSPIRQAQASPAKPKQLVFSLSSDETGSE
>NZ_LR594690.1|WP_068673572.1|8776_9085_+|hypothetical-protein
MTFLRTLKGKALAALAVAGASPAVFAGQLDQNDAFYSFWKTVDGWTTGALGVGLATTMLLMGGAIGVAKNSPMPALTGIAGGAFLHWGPSIIQQIMVGGGLI
>NZ_LR594690.1|WP_068673570.1|9158_9452_+|hypothetical-protein
MDQESHVFPFDLESPIPIMFWDPLEFTLSLILMGFGIIAHMWILGVLMGGGVLIGARYLKRGSKRGAMQHFLWAHGLQLDAPLKTRFKPAWLNDFTE
>NZ_LR594690.1|WP_068673568.1|9469_10060_+|hypothetical-protein
MSDPKQNNYLDSVANAFKTAQAWKSATYTLGVAVIFLVSALIYQQRNTPVVLVPHDLAASGTRVTVTTNGEIRGTSSEYMANAAMSDASLILNFIPDNVVTQTTRFLNRLTEDLYGEQREPLLAQAEDFKRRGVTQSFYPSEVKVSPDGKRVQIDGTQLRWVGGKETLRAKLTYVITYKVYKGYLHVADLRQQQDK

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Crispr_ID: NZ_LR594690_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR594690_2

425854-426797

TypeI-E

Consensus_repeat	Method
CGAGCTATCCCCGCTTGCGCGGGGGAGAC	CRISPRCasFinder
CGAGCTATCCCCGCTTGCGCGGGGGAGAC	CRT
CGAGCTATCCCCGCTTGCGCGGGGGAGAC	PILER-CR

15 spacers

cas8e,cse2gr11,cas7,cas5,cas6e,cas2,cas1,cas3

The CRISPR arrays of NZ_LR594690_2

>merge|NZ_LR594690|2|425854-426797|CRISPRCasFinder,CRT,PILER-CR
CTTCCAATCCCCGCGCAAGCGGGGGTGACGTGCTCATTGGCGTGAACTTGGCCATCAAGGGCGAGCTATCCCCGCTTGGGCGGGGGAGACCTCAGCAAATGCTCATCGCCCGCAGCCCGTACCGAGCTATCCCCGCTTGCGCGGGGGAGACACGCGTGAGCAAATCGAGGACGACCAATTTCACGAGCTATCCCCGCTTGCGCGGGGGAGACGTGTCCACCGGCATCGACCACTTCGAAGAGGGCGAGCTATCCCCGCTTGCGCGGGGGAGACTCAATGCAGCGCGCTTGCCAGGTGATAGCGCACGAGCTATCCCCGCTTGCGCGGGGGAGACCCCTCGGCGTCCTCGAGGCCAATCACCAGCCGCGAGCTATCCCCGCTTGCGCGGGGGAGACGTCTACGGATGTCTGGGTGGCTTCCTCGTCGGCGAGCTATCCCCGCTTGCGCGGGGGAGACGGCTCCTGGATGGCGATGCTCTCGATGGTCGACGAGCTATCCCCGCTTGCGCGGGGGAGACGAAGCCCCCTTCTTTGCATGCAACAAGCCTCGCGAGCTATCCCCGCTTGCGCGGGGGAGACAGGGGCACGATGTCGAACGCGGTGGACGCCGGCGAGCTATCCCCGCTTGCGCGGGGGAGACTACTCGACGTCTCGAGATGGAAGCAAAGACTGCGAGCTATCCCCGCTTGCGCGGGGGAGACAGCAGCTGCGCGGTACGCGCGCCCCAGCACGGCGAGCTATCCCCGCTTGCGCGGGGGAGACGCGTGCGGCTCACCTTGGTGCGAACGGATTTACGAGCTATCCCCGCTTGCGCGGGGGAGACGACGTTGCAGCGGCCGTCAGCGCCCCACAAGACGAGCTATCCCCGCTTGCGCGGGGGAGACGCGCACGCAGCACGCCAAAGCCTGACGCTGCGCGAGCTATCCCCGCTTGCGCGGGGGAGAC

>NZ_LR594690|2|2|425854-426797|CRISPRCasFinder
CTTCCAATCCCCGCGCAAGCGGGGGTGAC	GTGCTCATTGGCGTGAACTTGGCCATCAAGGG
CGAGCTATCCCCGCTTGGGCGGGGGAGAC	CTCAGCAAATGCTCATCGCCCGCAGCCCGTAC
CGAGCTATCCCCGCTTGCGCGGGGGAGAC	ACGCGTGAGCAAATCGAGGACGACCAATTTCA
CGAGCTATCCCCGCTTGCGCGGGGGAGAC	GTGTCCACCGGCATCGACCACTTCGAAGAGGG
CGAGCTATCCCCGCTTGCGCGGGGGAGAC	TCAATGCAGCGCGCTTGCCAGGTGATAGCGCA
CGAGCTATCCCCGCTTGCGCGGGGGAGAC	CCCTCGGCGTCCTCGAGGCCAATCACCAGCCG
CGAGCTATCCCCGCTTGCGCGGGGGAGAC	GTCTACGGATGTCTGGGTGGCTTCCTCGTCGG
CGAGCTATCCCCGCTTGCGCGGGGGAGAC	GGCTCCTGGATGGCGATGCTCTCGATGGTCGA
CGAGCTATCCCCGCTTGCGCGGGGGAGAC	GAAGCCCCCTTCTTTGCATGCAACAAGCCTCG
CGAGCTATCCCCGCTTGCGCGGGGGAGAC	AGGGGCACGATGTCGAACGCGGTGGACGCCGG
CGAGCTATCCCCGCTTGCGCGGGGGAGAC	TACTCGACGTCTCGAGATGGAAGCAAAGACTG
CGAGCTATCCCCGCTTGCGCGGGGGAGAC	AGCAGCTGCGCGGTACGCGCGCCCCAGCACGG
CGAGCTATCCCCGCTTGCGCGGGGGAGAC	GCGTGCGGCTCACCTTGGTGCGAACGGATTTA
CGAGCTATCCCCGCTTGCGCGGGGGAGAC	GACGTTGCAGCGGCCGTCAGCGCCCCACAAGA
CGAGCTATCCCCGCTTGCGCGGGGGAGAC	GCGCACGCAGCACGCCAAAGCCTGACGCTGCG
CGAGCTATCCCCGCTTGCGCGGGGGAGAC

>NZ_LR594690|2|1|425854-426797|CRT
CTTCCAATCCCCGCGCAAGCGGGGGTGAC	GTGCTCATTGGCGTGAACTTGGCCATCAAGGG
CGAGCTATCCCCGCTTGGGCGGGGGAGAC	CTCAGCAAATGCTCATCGCCCGCAGCCCGTAC
CGAGCTATCCCCGCTTGCGCGGGGGAGAC	ACGCGTGAGCAAATCGAGGACGACCAATTTCA
CGAGCTATCCCCGCTTGCGCGGGGGAGAC	GTGTCCACCGGCATCGACCACTTCGAAGAGGG
CGAGCTATCCCCGCTTGCGCGGGGGAGAC	TCAATGCAGCGCGCTTGCCAGGTGATAGCGCA
CGAGCTATCCCCGCTTGCGCGGGGGAGAC	CCCTCGGCGTCCTCGAGGCCAATCACCAGCCG
CGAGCTATCCCCGCTTGCGCGGGGGAGAC	GTCTACGGATGTCTGGGTGGCTTCCTCGTCGG
CGAGCTATCCCCGCTTGCGCGGGGGAGAC	GGCTCCTGGATGGCGATGCTCTCGATGGTCGA
CGAGCTATCCCCGCTTGCGCGGGGGAGAC	GAAGCCCCCTTCTTTGCATGCAACAAGCCTCG
CGAGCTATCCCCGCTTGCGCGGGGGAGAC	AGGGGCACGATGTCGAACGCGGTGGACGCCGG
CGAGCTATCCCCGCTTGCGCGGGGGAGAC	TACTCGACGTCTCGAGATGGAAGCAAAGACTG
CGAGCTATCCCCGCTTGCGCGGGGGAGAC	AGCAGCTGCGCGGTACGCGCGCCCCAGCACGG
CGAGCTATCCCCGCTTGCGCGGGGGAGAC	GCGTGCGGCTCACCTTGGTGCGAACGGATTTA
CGAGCTATCCCCGCTTGCGCGGGGGAGAC	GACGTTGCAGCGGCCGTCAGCGCCCCACAAGA
CGAGCTATCCCCGCTTGCGCGGGGGAGAC	GCGCACGCAGCACGCCAAAGCCTGACGCTGCG
CGAGCTATCCCCGCTTGCGCGGGGGAGAC

>NZ_LR594690|2|1|425915-426797|PILER-CR
CGAGCTATCCCCGCTTGGGCGGGGGAGAC	CTCAGCAAATGCTCATCGCCCGCAGCCCGTAC
CGAGCTATCCCCGCTTGCGCGGGGGAGAC	ACGCGTGAGCAAATCGAGGACGACCAATTTCA
CGAGCTATCCCCGCTTGCGCGGGGGAGAC	GTGTCCACCGGCATCGACCACTTCGAAGAGGG
CGAGCTATCCCCGCTTGCGCGGGGGAGAC	TCAATGCAGCGCGCTTGCCAGGTGATAGCGCA
CGAGCTATCCCCGCTTGCGCGGGGGAGAC	CCCTCGGCGTCCTCGAGGCCAATCACCAGCCG
CGAGCTATCCCCGCTTGCGCGGGGGAGAC	GTCTACGGATGTCTGGGTGGCTTCCTCGTCGG
CGAGCTATCCCCGCTTGCGCGGGGGAGAC	GGCTCCTGGATGGCGATGCTCTCGATGGTCGA
CGAGCTATCCCCGCTTGCGCGGGGGAGAC	GAAGCCCCCTTCTTTGCATGCAACAAGCCTCG
CGAGCTATCCCCGCTTGCGCGGGGGAGAC	AGGGGCACGATGTCGAACGCGGTGGACGCCGG
CGAGCTATCCCCGCTTGCGCGGGGGAGAC	TACTCGACGTCTCGAGATGGAAGCAAAGACTG
CGAGCTATCCCCGCTTGCGCGGGGGAGAC	AGCAGCTGCGCGGTACGCGCGCCCCAGCACGG
CGAGCTATCCCCGCTTGCGCGGGGGAGAC	GCGTGCGGCTCACCTTGGTGCGAACGGATTTA
CGAGCTATCCCCGCTTGCGCGGGGGAGAC	GACGTTGCAGCGGCCGTCAGCGCCCCACAAGA
CGAGCTATCCCCGCTTGCGCGGGGGAGAC	GCGCACGCAGCACGCCAAAGCCTGACGCTGCG
CGAGCTATCCCCGCTTGCGCGGGGGAGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR594690.1\|WP_146039555.1\|421027_421681_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09727_cas6e_CAS-I-E	gnl\|CDD\|215025
NZ_LR594690.1\|WP_083944143.1\|449037_449880_-\|translesion-DNA-synthesis-associated-protein-ImuA	unknown	unknown	gnl\|CDD\|380271
NZ_LR594690.1\|WP_146039554.1\|418908_419163_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594690.1\|WP_146039553.1\|418127_418748_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594690.1\|WP_146039557.1\|446923_447319_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594690.1\|WP_174262850.1\|432441_435675_-\|error-prone-DNA-polymerase	unknown	unknown	gnl\|CDD\|235553
NZ_LR594690.1\|WP_146039556.1\|431748_432054_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|238045
NZ_LR594690.1\|WP_068674082.1\|435837_436860_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_LR594690.1\|WP_068674097.1\|422373_423543_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153
NZ_LR594690.1\|WP_068674089.1\|427416_428013_-\|CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_LR594690.1\|WP_083944166.1\|426830_427193_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	pfam09707_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_LR594690.1\|WP_068674076.1\|447728_449093_-\|DNA-polymerase-Y-family-protein	unknown	unknown	gnl\|CDD\|176458
NZ_LR594690.1\|WP_083944147.1\|421686_422364_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187886
NZ_LR594690.1\|WP_083944146.1\|429025_431599_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|182031
NZ_LR594690.1\|WP_162487214.1\|419378_420413_-\|DGQHR-domain-containing-protein	unknown	unknown	gnl\|CDD\|319270
NZ_LR594690.1\|WP_162487215.1\|423597_423963_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_LR594690.1\|WP_068674080.1\|437169_446817_+\|choice-of-anchor-D-domain-containing-protein	unknown	unknown	gnl\|CDD\|380152
NZ_LR594690.1\|WP_146039552.1\|416967_418029_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594690.1\|WP_068674093.1\|424082_425654_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09729_cas8e_CAS-I-E	gnl\|CDD\|187860
NZ_LR594690.1\|WP_068674107.1\|415885_416893_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_LR594690.1\|WP_146039555.1\|421027_421681_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|215025	smart01101, CRISPR_assoc, This domain forms an anti-parallel beta strand structure with flanking alpha helical regions.	7.99598e-40
NZ_LR594690.1\|WP_083944143.1\|449037_449880_-\|translesion-DNA-synthesis-associated-protein-ImuA	gnl\|CDD\|380271	NF033429, ImuA_translesion, translesion DNA synthesis-associated protein ImuA. A three-gene cassette encoding ImuA, ImuB, and ImuC (""inducible mutagenesis"") is induced by DNA damage, is capable of DNA synthesis across DNA damage lesions, and consequently is associated with mutagenesis. This family, ImuA (previously misnamed SulA in Pseudomonas putida) shows some homology to SulA itself and to RecA. ImuB resembles Y-family polymerases but may be catalytically inactive. ImuC is a C-family polymerase, and catalytically active.	1.17059e-73
NZ_LR594690.1\|WP_068674082.1\|435837_436860_+\|transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	1.79771e-08
NZ_LR594690.1\|WP_068674076.1\|447728_449093_-\|DNA-polymerase-Y-family-protein	gnl\|CDD\|176458	cd03468, PolY_like, DNA Polymerase Y-family. Y-family DNA polymerases are a specialized subset of polymerases that facilitate translesion synthesis (TLS), a process that allows the bypass of a variety of DNA lesions. Unlike replicative polymerases, TLS polymerases lack proofreading activity and have low fidelity and low processivity. They use damaged DNA as templates and insert nucleotides opposite the lesions. The active sites of TLS polymerases are large and flexible to allow the accomodation of distorted bases. Expression of Y-family polymerases is often induced by DNA damage and is believed to be highly regulated. TLS is likely induced by the monoubiquitination of the replication clamp PCNA, which provides a scaffold for TLS polymerases to bind in order to access the lesion. Because of their high error rates, TLS polymerases are potential targets for cancer treatment and prevention.	4.81905e-32
NZ_LR594690.1\|WP_174262850.1\|432441_435675_-\|error-prone-DNA-polymerase	gnl\|CDD\|235553	PRK05672, dnaE2, error-prone DNA polymerase; Validated.	0
NZ_LR594690.1\|WP_068674097.1\|422373_423543_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	9.5241e-85
NZ_LR594690.1\|WP_068674089.1\|427416_428013_-\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	3.35378e-80
NZ_LR594690.1\|WP_083944166.1\|426830_427193_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	4.53599e-30
NZ_LR594690.1\|WP_083944147.1\|421686_422364_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187886	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	4.39883e-28
NZ_LR594690.1\|WP_146039556.1\|431748_432054_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	4.28293e-12
NZ_LR594690.1\|WP_162487214.1\|419378_420413_-\|DGQHR-domain-containing-protein	gnl\|CDD\|319270	cd16413, DGQHR_domain, DGQHR motif containing domain. Uncharacterized diverse domain family with conserved DGQHR motif, in addition to QR and FXXXN motifs. Some proteins have been identified as parts of DNA phosphorothioation systems. Related to dndB, which acts in the regulation of DNA modifications, including DNA phosphorothioation. These proteins show similarity to the N-terminal domain of ParB, a DNA-binding component of the prokaryotic parABS partitioning system, and other members of the ParB/Srx superfamily.	1.16029e-50
NZ_LR594690.1\|WP_162487215.1\|423597_423963_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	9.54537e-10
NZ_LR594690.1\|WP_068674080.1\|437169_446817_+\|choice-of-anchor-D-domain-containing-protein	gnl\|CDD\|380152	NF012200, choice_anch_D, choice-of-anchor D domain-containing protein. This HMM describes a repeat domain just over 100 amino acids long and usually found in tandem copies. Members appear to be extracellular proteins that have some C-terminal anchoring domain, such as type IX secrection (T9SS) or PEP-CTERM.	1.87262e-12
NZ_LR594690.1\|WP_068674093.1\|424082_425654_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|187860	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; subunit of the Cascade complex; signature gene for I-E subtype; also known as Cse1/CasA/YgcL family.	1.21289e-40
NZ_LR594690.1\|WP_083944146.1\|429025_431599_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	2.27888e-124

>NZ_LR594690.1|WP_068674093.1|424082_425654_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MNVLLDPWVPLLLPDGTVAKQRMVDIPTSGALRVEHARADYSALITELAVCVYQTLAAPHDRIARRALVRAPDLALLDKAFRTAAPAFEIFGDGARFLQSPEAIGGEIPVRGLVPEGPGANAVAKNTDLFVHRSALDSMCPHCAPAALFGNQAHAGQGGSGYKVALRGGSALAALIEAPTLWETICLNLLDRDTYTDRYCLEGGAEEDFPWTTGLKVFSKEAIGPRELGAHAALWWMPRALRLHESANADGTSCSTCGEVHPTHIRTASRDKTAARPPEGLRHPHTAWCMLKNEKEIDGVKTKVDVEAAVMVPSEGYMLGDWLALTLGAQTPTRRILAGLPAMAHLSRAEAARATLRVFGPRYATATFLTWFDEAGPLLAAADAEHLRQLRAEAEKLVAEAQRVLVIVRTAARKNLGSKKRPLAVPLSSSPGQLESELAGRARSLISRALAKVDGAGGSLTQDDYEQFCSQLRKAAVSLFNRALVIDFANETLSHKLVLLSAKTYSLIYPKAKPASNQDAIAA
>NZ_LR594690.1|WP_162487215.1|423597_423963_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MFEPTFPQTRQALSAAGHRVRDENLACALLLLPHVGQGKASLGQALGDKKHPYSALRFQQLVTAEGPEELFTHVHRAIRFVEGQVSPFSIADLALNWTEGYADVLRKRLVADYHSVKLTAA
>NZ_LR594690.1|WP_068674097.1|422373_423543_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTKKFIQIHALTAYGANNLNRDELSRPKSEVFCGVPRLRLSSQCLKRAYRTSEVMADIMTGTRSRDLWFTLASEQVALGHPEAAVIAHIVPVRDAFEGSKSAAPKDEESGTDDADSETPPSEAKKGKGGKKKKGAAPLPATLAELKGNLFYASKSEVEFIKTVLADSLNPSGSTKGAPIEQKVVEGQILDLLMSVDVAMFGRMVAGNKPLSVEGGVQAAHAFTVHKATADDDFFTAVDDISPDEGSGHMGSNGFGAGVYYSYFNVDVDVLLKNLNGDKALAARAIEAFIEAVATVAPGGKQNTFAARSYAFYLAVEVGNAQPRSYADAFAAPVKGDDITGGAVAALRANREAAFQCFPSQRTEYREMFVAARQGSLPEVQALVAEAVAA
>NZ_LR594690.1|WP_083944147.1|421686_422364_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MHYLVLQLKAPLASFGSTSGEQRGTDGRPRRAAVVGLLAAALGIQRSEDSRFLALSNALSLGYVVLRTPTVLVDFHTVQAPAKQIGRTRREQLATGEPNSMVTRREYLQSGHWLVVLGGEESVLRTIADALCAPAFPLYLGRKSCALSAFTAPLVFAAETAEDAMREWSRRVGGTGHPCEREFFWEADLPTAVEPLVVHRRNDRRTALSRNSFSSRVEREGHLTL
>NZ_LR594690.1|WP_146039555.1|421027_421681_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MQLTHLTLPRTRESVAAYSRLVANKYVEHQALWSMLQARPDASREFLYRTEITDDGLEVYVLSPKALSPEGPWRARTREYAPKVRAGQLVGFSLRVSPTEDKAQGLNARSKRVDMVMDRYQAAGGEVDVQTIAQGVAADWLERREESSGFRVVDCSAGNYRRFDVTKRGQHMTKLSYLDITGTLEVQDPARFLTKLATGYGKAKFAGCGLMLLSAPK
>NZ_LR594690.1|WP_162487214.1|419378_420413_-|DGQHR-domain-containing-protein
MTALPGQLRAIARVERVGREEDGKLRGFQRHLVAKHIREISEYLQEGHAILPNPVVIAFVKGARVEQVAGKLHELVVTLRDGDGPGFVVDGQQRLEALVASGRTDFEVFCSVLICEDYAELRRQFVLINNTRPLPKQLVYELLPTVSSLPKRMSSRSFGSQVVEQLNYRADSSLRRAVSQHTNPKGVVRDTALQKLVMCSRSDGALREAPAETAVARSADLVSDFFWAVRDTWPCAWDEQTPRTSRLVHSAGIMALGFAMDYLHGVEGARTRQQFRAGLERIANECAWTHGSWRFSVDDVRPWNQVQNAGRDVSILANHLVRSLKETGRPRRRAARVGIQSALA
>NZ_LR594690.1|WP_146039554.1|418908_419163_-|hypothetical-protein
MNDLSAAGRKAWAREVERQMQSASLRGEACVVLAGRAYRDDLMRFLSTRFGDVHVPLAGLGILSQKAWLKRRLAQQAAGFAQAA
>NZ_LR594690.1|WP_146039553.1|418127_418748_-|hypothetical-protein
MLGESLYVWGSAEEYERNREKISVVDSMRWRHLRMGLSDSFPKGSRKRAFLANFERAVFLKTRPSAAERQRLWSEVAYLNLVPRLLNSRTHRPKDEDFVAGWNQFFPVAAALEAERCIVYGTEPKKIAALRAMPDVQILVQERLPAIVDTRPLHMRLVHGGRELELFFVRHPSAYFPWDEWGPVLRSRGVWLDSTSVPPAQVAEPA
>NZ_LR594690.1|WP_146039552.1|416967_418029_-|hypothetical-protein
MFGTVMPFHRAAGCLALVASAALATAQPAPTAPRGPSEEAMRAFLAQGKWSTTADDNISGELLQADFIKTLVEAYETNPTDATAIANLSLIPLALAVAEWGVSPTTGLPKDPARRNWEAVESTGDGKHLMSYSKGGIGVMHQDSGGLEKLMGYLEKNHPDVVPAANKNEFFKLKGVNFDRLYASGGHCTSPLTEVKTDLAGAAFQHDEHPRFAGKKYCRDYFRSTLSPKDWQVFRHGMREALRREDVQFRIMRDFANNEWASAYRLVVTDGKHDVREAFILARIWNSSPRGARCAFGHAKGATGTAARIQKELEAYADDEICPKDGKERMVERWPYMRRAVLAYDAFAKKPPP
>NZ_LR594690.1|WP_068674107.1|415885_416893_+|hypothetical-protein
MNANDTAAEAPYRLDEIEGILREAGLPYSRIGNHLRAELYALDAFYGIAYIVAAEEVFSFAGSQGEVEYARSQLWEHVCGKDHFEYSPKKNLYLFVVGPSELIDQPEYLVARAHIVNDDRNYAMKRVVTPAQAQLLLQNPFQPLVGAARAAERPELHLVREPYEQLGTTPEQLEASAGLTVGPILDYREAERRYDSPALVSRGDEFTDEVWDHVEVIFRRLMGLDYGLRRTVLGLCVTHRGNPHGAFMWQASRGERMAFAFAQFLAEAAKDVKPGLCLGVHDVLAAFDTLRQLVALDLLRDFAVATGASIQLRSAKQDFKRLAEAKFNLLKALPA
>NZ_LR594690.1|WP_083944166.1|426830_427193_-|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MLVLVLTGAPPRLRGRLSTILLEVRAGVYTGHATQKLREELWALTCGNIEDGDALIVWPDQTEVCGVSFRTVGVNRRRAVEVDGLQLVDFPRLSTDEVPESIMDLAGLAEVVFPGGQCDN
>NZ_LR594690.1|WP_068674089.1|427416_428013_-|CRISPR-associated-endonuclease-Cas1
MNAPLKPIYRLQKERIPFIFLSYGRLDVKDGAFVLEDANGTRVQMPVAAFNVLFLEPGTSVTHAAFQLAAQCHTLICFVGEQACRTYSVGRPSDGNPTNLKVQVLAYADEARRLQVARKMFEIRFGEAIPARRSIEQLRGIEGVRVRESYKLLARQFGVDWKGRTYEQGEWDAADSVNRALSAANAVAVILACGYSPR
>NZ_LR594690.1|WP_083944146.1|429025_431599_-|CRISPR-associated-helicase/endonuclease-Cas3
MTADFLTYWGKAHPLPGTTVAWHPLAYHSLDVAAVVGEYLRVNPSLSSTLARLLGMAEDAAIKVAMFLAGSHDVGKFGPFQAKVEELFAQLQPDQPVPSQAAQHHSQAGISTLLDWVSARWYPDSLEDAELALEPLLNASCGHHGRPVDLSNSTGVGKRTTAAAHAYLDAVADVLGLDSFVDLWDGGGYRQASSLLAGVLTLCDWVGSMQRFFPYRAPTMSLKCYFVEAQDQARTALVELSLAEKRPSAKAGLSHLFPAFTASATPLQRFADSVELDRAGPSLFILEDETGAGKTEAALTLASRLLQAGRGTGVLVSLPTQATADALCGRLLPLANMFFEAEGGVPSFSLAHGSASLSLARLRSEHLEAGSICADLDSWAQDSSKTALLSDVGVCTIDQVALSILPVKHFCLRQLGIGQKVLVVDEAHACDAYMLKLLETALEAHAMRGGSAILLSATLPRKHKAALVAAFRKGARWTGAQAVPVSTDYPLATVASSGGMVETPIAARRVSRFTRIQRIGDSATEALVLRLLAAGKCVLLLRNTVGRAQADFDTFFALLPGQVQLAHAKFVGKHRSENDRNLLEQFGKRSTSATRKGQLVIATQVAEQSLDVDFDELITDLAPIDALLQRIGRWRRHVRDADGKMAMAGDDARGEGLVYVVAPETHGNVDFLAELPANTMFVYPLPVVLFRTAQLVEERGGLQIPAGVREAVEFAYDEEAEAPAFLAFAEERSEGKIEAAKRAAKNVRLNLTVGYSQLIADVAPEQAVTRLGEKSVRVVLCDQGGAPLFGSMELSRLSLRASLLALEVDDTGHAKLRMGAAGSGEWEMLAVDHASKERLVRYSRTRGFSVGPPQRRR
>NZ_LR594690.1|WP_146039556.1|431748_432054_+|helix-turn-helix-domain-containing-protein
MEMDNLPKRIITSRERLGMTQKELAALVGVTLQAVRKMESDAGGVSAVNAFAVADALQVSARWLVTGVDAAGEPPKVPPSSSASRCTWPHCQRIAWTPWRR
>NZ_LR594690.1|WP_174262850.1|432441_435675_-|error-prone-DNA-polymerase
MAQSDCRHRARRTARAGRAGAVPVRCRRPASCAILYGHPVSWPPAMSALPAYAELRCVSNHTYLRGASQPEELVERASQLGYSALAIADECSLAGIVRAHVAAKEHGLKLLVGTQVQVACGHPFTLLVLACNLNGYGNLCEFITKLRRGSEKGKYELQFADLTAAALEDCVVVACPKRMSTPEQLETTGRWLLSEFRGRCWFGVDLLRLIDDEMWLYRLRQVSELTAIPLVAAGDVHFHVRSRKPLQDVLTATRVGRPLTECGLDLQPNAERHLRTRLRLAQTYPEDLLAETLNVAARCQFSLEELRYQYPDEVVPDGETPSSYLRRLTYEGAGRRWPEGVPAKVQLQIEHELTLIQELRYEHYFLTVADIVQFARSRNILCQGRGSAANSVVCYCVGVTEVDPARMSVLFERFISKERNEPPDIDIDFEHERREEVLQYLYRRYGRDRAAITGVVTSYRPKSAVRDVGKALGFDLEVVDQLAKNHQWFDGKAVMPERLVELGLSLDDLKVRQLMLLTGQLLGFPRHLSQHTGGFVLTRTALSRLIPIENASMKDRTVLEWDKDDLDALGFLKVDCLALGMLTAIRKCLDFIGQRKGFVFAMQDIPAEDPETYEMISRADTVGVFQIESRAQMSMLPRLKPRCFYDLVVEVALVRPGPIVGGMVHPYLRRRQGLEPVTYPSEALKEALGRTLGVPVFQEQVMQIAMLAAGFTAGEADGLRRAMAAWKRKGGLEKYHSKIVEGMTTRGYEKAFAEQIFEQIKGFSEYGFPESHAASFALLVYASSWIKRHHPAEFLTAMLNSQPLGFYSPSQLVQDAKRHGVVVRPPDVMHSNLDCTLEDLPHAPAVRLGLRLLAGLRWESAQRIVDERARGPFDNAEDLARRARLELAEMKLLASADALMSLSGHRRVAVWDAAALRSVPELLQEARVDEDVLELAPAPEGEEVMFDYAATGLTLRSHPLALLRPLLAKRGLATAADLQDVENGAEVRYCGLVTLRQQPETANGVIFVSLVDETGVVQVIAWRSIKEAQRQELLNARLLAVKGTWQREGELRSLVAERLKDLTPLLGRLRTTSRDFH
>NZ_LR594690.1|WP_068674082.1|435837_436860_+|transcriptional-regulator
MPATANQVDATSRKRKLDLADRLELGARLRKLREATGKTTLEIAEEVLGYQGSHAAVSRLERGVFSVVNLDHLDKLASRYATDSATLLKGTGDVETAALPEVTGEWSFDDIAPGIHFRLRDLRQALGLSRAQMATRLGHSTATVLKGWEERLATPRPDTILRIATEFGVSGSWLILGAKGKAPRPTQSMRLRALRHASDVSRNQLAMKVEPLDFQGLRTAISHAESGVRGLPSDRLQSIAKAFDVPADWLDPEGLRYAPATPIDAPAQSEADYLAGLPATVRSLVNNLVAMFTTGLLDSGDVASVNKELSRRAWKRATPSTAPVSGAQVGDVRRSRIVTA
>NZ_LR594690.1|WP_068674080.1|437169_446817_+|choice-of-anchor-D-domain-containing-protein
MRPSFKRFVCALLSATIVLQPALSAAASDFRYRIPIDIKLTGQADLEIQPELTDFGDVARTQMRTLPVKVVNHGGGAATDVTAVATAPFAVEKTCSTVPAHGECTMLVSFMPQEAGPQFGSLVLQGSNSRAEGSLIGNAVRLLTDLEISENGWNFGTWKLGTTSTVKQLAVKNVGNVPAIISQMYFLDGGSDFKVSHNCSTSLSPGAACIVAVNFIPTAMGQRVGALRVKSGDGSIRDVGMLGFGGDHTDPSEGAVDGRLSAPDSVSLGDVVVGEAPATKTITLANAGTKELTLGSPTLGGPDAALFSSSSTCGATLPAYATCQLALAFSPAVVGTFSAQLAIPTGAGQTTLTKTVALSGKGVSSAAKGQLSTNMSEVDFGTTTLGTAVSRVVRVTNAGPDVAEVTHTYATNSANFVVTTGCTAPLAAGEYCDLTVQYTASSVERSIGDLVIASQAGQNLLVHLKGHVPAPVLEVAPGSLQFEAMSQGDTSNYQEVTVTNVGSAPLEVTNVGLASTVEFNQENSCGSPLAPGASCAVRVQFTPNGSGTRETELLVVSNDPVNPAASVSLRGVGLSSELQFTPSRLAFGSVSMGSSSAPEDITISSVGAGNALISGVNIQGSGFSQVNTCGVKLPKGESCTVTVTYTPTAAASETGYLRVYSPQGVQMASLSGEGLTADQALVVDKRYLNFGSFEVGQGSSADIQVSNSGSEALSLNAPSLSGADAAAFTTSTTCGATLASSESCVVSVAFSAQALKPHAAALTVATAGGVQREVLLYGKGVDHVPAAVLTASPNPLSFGAATPASPATAALRISNAGPEAVSLVSVDSTDPTNFTSSETDCREPIAAGTHCDLPVRFLAGKDGLVTAQLNLRAENQQPLAVALTGQGPTPRISVAPTALDFGSVDFLATAPQQTVTVQNTGNARLALSGVGISGAFTQSNTCGPELAPSATCEIQVGFNPVSGGAQAGTLVISSNDPTMPTYSVALAGLSLLGSVAATPTELAFGQVAMGEHAAQVVSIYNPGPGGVGISSIALDGLNKTAFSFTSDCGPQLGKDKACSVTVRFSPQASGAHEAALAVVPQTGNRLTIPLTGNGPTARASVDSNSLAFGSVVVGESSAAQTVMLTNESTGPLNVYDISMATGAESFGVSSDCVSPLATGQSCPLYVSFTPASGGALTGALRLKTANSGGPLDVALTGTGLLPQAALSQPSVDFGTVYVGGTAESVVQVKNTGAYPVKVNSIGIPDNTWFQQNNACSQPLRAGEACDIALNVFPTTAGPQSSTLTVLTTAGTLTATLGATGQGVKLTRVTPSIADSNGGTLVSVLGAGFTAATRIFFGDVAASTIQVRGSTQLDVVAPAHATGVVDVTMTNDAGLTATLPQALRYAGAPVIASTTPATGSVAGGWPTLLQGRDFAEGMKVLVDGQAAQVTSVSADGSSATVVVPARLSPEAGTVDVVATTAVGNGTLSKGLAYVLPQGKLKLLGQGAFGNIAVGATYGRIFTLTNTGDLPTQLVGLSPEPSGTFSIGTNGTCPTALPAPLAVGASCTVEVLASNAAQGTVAGTLTASTGGPTGTQVSVSLSASFVQADYALSGTAGSMALVSGNYPTIIAMSEEGGANGTQQKIIYLNNVLKAAGTRIDAATVTITGADAGQFAITEVRKSSNSGSYSSSGASISGDRLTATGATVDAGSGTYPHLGVVVTFAPKAKGTFNAQLNIDYNGGSRAQLPLFGVAEYFSYAALSGTASANPVVAPNGDFGTLTFNDGAGLTSDALKRKFFLVSTSNAGKRLQATHLSIIGADAASFAITGYSYRATADGTLPAQDVRPANMRQGSVAEALLVEIAFSPMRAGAQEAQLVVEHNGDNAQPAVVNLTGTGAYDVSVQASGGPFIADIPPFPVTGVGASSTLDTYVRNTGTFGQVTWKSIQIVGSQAFSVKGVSLTNTGSTSSSALQAQPASTRYVNMNLVGADARTMGLSDLRALLAFSPTTTGVQTATVTVFHDGPGGKTTYTLTGEGRRAAAALSSTAAAPYVPASGDLGVAGFNAPGDASNGSVSKTLNVVNSNTLGLLRVTRLRITGADASAFAIESYPNQPGGYVPSPDVSPAAMVQGTASASLPFKVKFFPVKLGAHEAKLEVYHDGMNISPVVLPLSGTASRDVMLAVSEGTSATIVEPTPFADTLVGNTSNERSFYLRATGSAGAVTYTGASIEGTTDIALTGSGLVRQGGTAAVASAFYSRVASAEFNYVGANVAPTGGYTDLVLKFTFQPSSLSQQVAKVTVTHNGPGGKTTFLLTGNGVQPIAALSAASALAANPAPPISDFGVVSYNASNPSPTPTTLTNYVVNTAGVGSLRVNRMVITGPDASSFQFTSWTGQGTAPAANDVTPIGMVQTTSTGPHFKVTFLPAHMGVHTAQVAIYHNGGNTNPLVLPISGTAASDVNVTVSDLATSVQAPAPYPVTVAGTTASKLIYLRVTGTKGQVTYTGFKVEGSPSFGVTSSLNKYPKGTTSYGGIVKNYNPDVVREDAFSWAGEDISKSGAVTDLGITVRYAPTEVGTETAKVTVFHTGPGGKTEFLLSGSSIKPIVQFSGTNVSKPTAASGDMGVATYNGPTGAAAGTVLKDLYLVNTNKVGYASVPRMRIVGADASAFTFATWTNYSSAENTGQDVSPTSLKQNNVSTNLNVRLQFKPTKAGAHAAQLLIDHNGANTSPLTLDLSGAGERDVTGVFATVDFADNGLIPDFAPQASIANSAFGSSTKLVNLRVAGSRGRVTYSGFKVEGSPAFAVTTVYAVHHTGASKTQLFTYAAPGVTEGAAPYVGADVAGGAVLSDYGLNVTFAPTTLGAHTATLTVFHDGPGGQTSFRVNGAAQTEMQLSSRPDIADYEFGASLSSMAQVSAPLPVYIRRTTGTTPLQVGTVELSGPDADQFSILSVVNVTDNAGTQGTSLWSDSQGAQSAAVNASLAGATGAVNVVYRPSRTPGASGHTATLTVSRAGFASQSVQLTGSVASDGQGFARFRPKASWNLSQDNLIATAVSPNYVGIGPAGGIRAGKWYFEVTDASPPPVVNPTTNGDGSRNYYTYATNLMQVGVGIGSSTPGATNTLALAPGVFYDYQSGTSRYWTQFSAGYNTPAGYSVATDARLKLETYKAYGIAIDYDNRRLDIYVQTSSGCAKALSYSPKPEALADTSAWYPVINSNATKSMVLTKGEGGTFRCKPAGYEALRN
>NZ_LR594690.1|WP_146039557.1|446923_447319_+|hypothetical-protein
MSHLFSVKNFSLFSALQSTGTLARLCRGGGAQTPNDGLHRFVLRSPEVQAAVRRSTGLPDFRIRIAYPEDPIAAGFMAAANTLRLEVYTVEGKPVGEPQLLPNLDDDLAVAIEAELFHELLKSKGIDIPLL
>NZ_LR594690.1|WP_068674076.1|447728_449093_-|DNA-polymerase-Y-family-protein
MLWAALLPDSQLSDTQRTEAIRGLAVWCLQFTPRVSIIDAASASAAVVMELEASVRLFGGKRKLVERVKTEAEEMGVGQLAWAPTSLAAVAVARTGQSNGFSKPLQALLDALPVEVLASAAAHAAILERIGCQTLGQVRALPRGGLSRRFDKELLGALDQAYGLKPEAHAWVQLPDTFAAKLELMSRIEMAPALLFGARRLLLQLCAWLAARRSGTTAFTLKWCHDAMRAKAAGDGGELSVRTAEPTRNIEHLSRLLAENLAKVELLAPVGDLALVADDVRPLEENSFSLLPETLPDGEGLALVLERIAARLGPERVLRPVILEDHRPEWMCHWQPAPDKRPRQVARLLDCPQPTFILPKPLRLASRESQPLYQGPLKFLIGPHRIEHGWFDRVGESLTDQASPGKAATSDQVETRHVARDYFVALSEHAGLLWVYQTRLASEESAWFLHGVFA
>NZ_LR594690.1|WP_083944143.1|449037_449880_-|translesion-DNA-synthesis-associated-protein-ImuA
MAALLEWADDDDAPALPSRRVKPVLKPGELPASVEAALWRGDQLGSPVTKVVPTGFAALDAELPGGGWPARSLTELLQAQPTVLEWRLLAPAMRQVVADGKDIVIVGPPKAPHLPGLRDEGIDERRMVWIQAATPAERLWVTEQLVKANAAGMLVAWLPQARQEQIRRLQVCAQGCDSPVVLCRPAAAQHEPSAAPLRLQVSYGVDWELQVHLLKRKGSTHDGVLHLPSIPRGLAPLITPRLSKPSVLLAARKPRVTAGEPSDALGSVTSRQPALRHPAH

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Crispr_ID: NZ_LR594690_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR594690_3

428138-428950

TypeI-E

Consensus_repeat	Method
GAGCTATCCCCGCTTGCGCGGG	CRT

13 spacers

cas1,cas2,cas8e,cse2gr11,cas7,cas5,cas6e,cas3

The CRISPR arrays of NZ_LR594690_3

>merge|NZ_LR594690|3|428138-428950|CRT
CGAGTGTCCCCGCTTGCGCCGGGGGGACATGCCCCATCCAGAACATTTCCTGTGGGCGAGCGAGCTGTCCCCGCTTGCGGGGGAGACCCATGGTTCTCGCCACTGCACGAGCAATCGCACGAACTACCCCCGCTCGCGCGGGAGAGACTCTGATGCGCGGCCGGACGTTCTGGTGGGGGGGCGAGCTATCCCCGCTCGCGCGGGGCCGACGACGCAAATGAGAGCGACTACTTGCTGCTTCCCGAGATATCCCCGCTTGCGCGGGGGAGACGAGGGCGGCGGCGTGCACGACGTCCTACAGAACGAGCTATGCCCGCTTGCGCGGAGGGGACGCAGGAGACAAGCAAATGGCAGCCCTCAAGTCCGAGATATCCCCGCTTGCGCAGGGAGACGCCTGATACTGCTCGCGCTCGCGGTTCCAGCCTGAGCTATCCCCGCGTGCGCGGGGAAGTCTCAACGCCACCGCAAGTGATGATGCGACAACCCGAGCTATCCCCGCGTAGGCGGGGGAGACCGGTCACCCCGAAAGAGGACGGCATCGCAGACCGAGCTATCCCCGCTAGCGCGGGGGGGGGAGCCGTTCGGTGCGATATCAGTGAACGAGACCGGCCGAGCTATCCCCGCTTGCGCTGGTGGGGGGGGAGCCGGCTTGCGGCCTCCGTATCCGGTGCGCATCATCCCGCTTGTGCGGGATAAACGATGGCGACGGTTGGCATCGGTCCGATGCTCCTGAGCTATCCCCGCTTGCGCGGGGAGAGACGCACGCGTCGTTCGACACCCGAAACTACGGCGAGCTATCCCCGCTTGCGCGGT

>NZ_LR594690|3|2|428138-428950|CRT
CGAGTGTCCCCGCTTGCGCCGG	GGGGACATGCCCCATCCAGAACATTTCCTGTGGGCGAGC
GAGCTGTCCCCGCTTGCGGGGG	AGACCCATGGTTCTCGCCACTGCACGAGCAATCGCAC
GAACTACCCCCGCTCGCGCGGG	AGAGACTCTGATGCGCGGCCGGACGTTCTGGTGGGGGGGC
GAGCTATCCCCGCTCGCGCGGG	GCCGACGACGCAAATGAGAGCGACTACTTGCTGCTTCCC
GAGATATCCCCGCTTGCGCGGG	GGAGACGAGGGCGGCGGCGTGCACGACGTCCTACAGAAC
GAGCTATGCCCGCTTGCGCGGA	GGGGACGCAGGAGACAAGCAAATGGCAGCCCTCAAGTCC
GAGATATCCCCGCTTGCGCAGG	GAGACGCCTGATACTGCTCGCGCTCGCGGTTCCAGCCT
GAGCTATCCCCGCGTGCGCGGG	GAAGTCTCAACGCCACCGCAAGTGATGATGCGACAACCC
GAGCTATCCCCGCGTAGGCGGG	GGAGACCGGTCACCCCGAAAGAGGACGGCATCGCAGACC
GAGCTATCCCCGCTAGCGCGGG	GGGGGGAGCCGTTCGGTGCGATATCAGTGAACGAGACCGGCC
GAGCTATCCCCGCTTGCGCTGG	TGGGGGGGGAGCCGGCTTGCGGCCTCCGTATCCGGTG
CGCATCATCCCGCTTGTGCGGG	ATAAACGATGGCGACGGTTGGCATCGGTCCGATGCTCCT
GAGCTATCCCCGCTTGCGCGGG	GAGAGACGCACGCGTCGTTCGACACCCGAAACTACGGC
GAGCTATCCCCGCTTGCGCGGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR594690.1\|WP_146039555.1\|421027_421681_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09727_cas6e_CAS-I-E	gnl\|CDD\|215025
NZ_LR594690.1\|WP_083944143.1\|449037_449880_-\|translesion-DNA-synthesis-associated-protein-ImuA	unknown	unknown	gnl\|CDD\|380271
NZ_LR594690.1\|WP_146039554.1\|418908_419163_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594690.1\|WP_146039553.1\|418127_418748_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594690.1\|WP_146039557.1\|446923_447319_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594690.1\|WP_174262850.1\|432441_435675_-\|error-prone-DNA-polymerase	unknown	unknown	gnl\|CDD\|235553
NZ_LR594690.1\|WP_068674082.1\|435837_436860_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_LR594690.1\|WP_068674097.1\|422373_423543_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153
NZ_LR594690.1\|WP_068674089.1\|427416_428013_-\|CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_LR594690.1\|WP_083944166.1\|426830_427193_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	pfam09707_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_LR594690.1\|WP_068674076.1\|447728_449093_-\|DNA-polymerase-Y-family-protein	unknown	unknown	gnl\|CDD\|176458
NZ_LR594690.1\|WP_083944147.1\|421686_422364_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187886
NZ_LR594690.1\|WP_083944146.1\|429025_431599_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|182031
NZ_LR594690.1\|WP_068674072.1\|450490_451048_-\|nucleoside-2-deoxyribosyltransferase	unknown	unknown	gnl\|CDD\|377443
NZ_LR594690.1\|WP_146039558.1\|450176_450368_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594690.1\|WP_162487214.1\|419378_420413_-\|DGQHR-domain-containing-protein	unknown	unknown	gnl\|CDD\|319270
NZ_LR594690.1\|WP_162487215.1\|423597_423963_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_LR594690.1\|WP_068674080.1\|437169_446817_+\|choice-of-anchor-D-domain-containing-protein	unknown	unknown	gnl\|CDD\|380152
NZ_LR594690.1\|WP_068674093.1\|424082_425654_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09729_cas8e_CAS-I-E	gnl\|CDD\|187860
NZ_LR594690.1\|WP_146039556.1\|431748_432054_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|238045

Protein	Function_ID	Function_description	E-value
NZ_LR594690.1\|WP_146039555.1\|421027_421681_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|215025	smart01101, CRISPR_assoc, This domain forms an anti-parallel beta strand structure with flanking alpha helical regions.	7.99598e-40
NZ_LR594690.1\|WP_083944143.1\|449037_449880_-\|translesion-DNA-synthesis-associated-protein-ImuA	gnl\|CDD\|380271	NF033429, ImuA_translesion, translesion DNA synthesis-associated protein ImuA. A three-gene cassette encoding ImuA, ImuB, and ImuC (""inducible mutagenesis"") is induced by DNA damage, is capable of DNA synthesis across DNA damage lesions, and consequently is associated with mutagenesis. This family, ImuA (previously misnamed SulA in Pseudomonas putida) shows some homology to SulA itself and to RecA. ImuB resembles Y-family polymerases but may be catalytically inactive. ImuC is a C-family polymerase, and catalytically active.	1.17059e-73
NZ_LR594690.1\|WP_068674082.1\|435837_436860_+\|transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	1.79771e-08
NZ_LR594690.1\|WP_068674076.1\|447728_449093_-\|DNA-polymerase-Y-family-protein	gnl\|CDD\|176458	cd03468, PolY_like, DNA Polymerase Y-family. Y-family DNA polymerases are a specialized subset of polymerases that facilitate translesion synthesis (TLS), a process that allows the bypass of a variety of DNA lesions. Unlike replicative polymerases, TLS polymerases lack proofreading activity and have low fidelity and low processivity. They use damaged DNA as templates and insert nucleotides opposite the lesions. The active sites of TLS polymerases are large and flexible to allow the accomodation of distorted bases. Expression of Y-family polymerases is often induced by DNA damage and is believed to be highly regulated. TLS is likely induced by the monoubiquitination of the replication clamp PCNA, which provides a scaffold for TLS polymerases to bind in order to access the lesion. Because of their high error rates, TLS polymerases are potential targets for cancer treatment and prevention.	4.81905e-32
NZ_LR594690.1\|WP_174262850.1\|432441_435675_-\|error-prone-DNA-polymerase	gnl\|CDD\|235553	PRK05672, dnaE2, error-prone DNA polymerase; Validated.	0
NZ_LR594690.1\|WP_068674097.1\|422373_423543_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	9.5241e-85
NZ_LR594690.1\|WP_068674089.1\|427416_428013_-\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	3.35378e-80
NZ_LR594690.1\|WP_083944166.1\|426830_427193_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	4.53599e-30
NZ_LR594690.1\|WP_083944147.1\|421686_422364_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187886	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	4.39883e-28
NZ_LR594690.1\|WP_146039556.1\|431748_432054_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	4.28293e-12
NZ_LR594690.1\|WP_068674072.1\|450490_451048_-\|nucleoside-2-deoxyribosyltransferase	gnl\|CDD\|377443	pfam05014, Nuc_deoxyrib_tr, Nucleoside 2-deoxyribosyltransferase. Nucleoside 2-deoxyribosyltransferase EC:2.4.2.6 catalyzes the cleavage of the glycosidic bonds of 2`-deoxyribonucleosides.	4.9727e-31
NZ_LR594690.1\|WP_162487214.1\|419378_420413_-\|DGQHR-domain-containing-protein	gnl\|CDD\|319270	cd16413, DGQHR_domain, DGQHR motif containing domain. Uncharacterized diverse domain family with conserved DGQHR motif, in addition to QR and FXXXN motifs. Some proteins have been identified as parts of DNA phosphorothioation systems. Related to dndB, which acts in the regulation of DNA modifications, including DNA phosphorothioation. These proteins show similarity to the N-terminal domain of ParB, a DNA-binding component of the prokaryotic parABS partitioning system, and other members of the ParB/Srx superfamily.	1.16029e-50
NZ_LR594690.1\|WP_162487215.1\|423597_423963_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	9.54537e-10
NZ_LR594690.1\|WP_068674080.1\|437169_446817_+\|choice-of-anchor-D-domain-containing-protein	gnl\|CDD\|380152	NF012200, choice_anch_D, choice-of-anchor D domain-containing protein. This HMM describes a repeat domain just over 100 amino acids long and usually found in tandem copies. Members appear to be extracellular proteins that have some C-terminal anchoring domain, such as type IX secrection (T9SS) or PEP-CTERM.	1.87262e-12
NZ_LR594690.1\|WP_068674093.1\|424082_425654_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|187860	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; subunit of the Cascade complex; signature gene for I-E subtype; also known as Cse1/CasA/YgcL family.	1.21289e-40
NZ_LR594690.1\|WP_083944146.1\|429025_431599_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	2.27888e-124

>NZ_LR594690.1|WP_068674089.1|427416_428013_-|CRISPR-associated-endonuclease-Cas1
MNAPLKPIYRLQKERIPFIFLSYGRLDVKDGAFVLEDANGTRVQMPVAAFNVLFLEPGTSVTHAAFQLAAQCHTLICFVGEQACRTYSVGRPSDGNPTNLKVQVLAYADEARRLQVARKMFEIRFGEAIPARRSIEQLRGIEGVRVRESYKLLARQFGVDWKGRTYEQGEWDAADSVNRALSAANAVAVILACGYSPR
>NZ_LR594690.1|WP_083944166.1|426830_427193_-|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MLVLVLTGAPPRLRGRLSTILLEVRAGVYTGHATQKLREELWALTCGNIEDGDALIVWPDQTEVCGVSFRTVGVNRRRAVEVDGLQLVDFPRLSTDEVPESIMDLAGLAEVVFPGGQCDN
>NZ_LR594690.1|WP_068674093.1|424082_425654_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MNVLLDPWVPLLLPDGTVAKQRMVDIPTSGALRVEHARADYSALITELAVCVYQTLAAPHDRIARRALVRAPDLALLDKAFRTAAPAFEIFGDGARFLQSPEAIGGEIPVRGLVPEGPGANAVAKNTDLFVHRSALDSMCPHCAPAALFGNQAHAGQGGSGYKVALRGGSALAALIEAPTLWETICLNLLDRDTYTDRYCLEGGAEEDFPWTTGLKVFSKEAIGPRELGAHAALWWMPRALRLHESANADGTSCSTCGEVHPTHIRTASRDKTAARPPEGLRHPHTAWCMLKNEKEIDGVKTKVDVEAAVMVPSEGYMLGDWLALTLGAQTPTRRILAGLPAMAHLSRAEAARATLRVFGPRYATATFLTWFDEAGPLLAAADAEHLRQLRAEAEKLVAEAQRVLVIVRTAARKNLGSKKRPLAVPLSSSPGQLESELAGRARSLISRALAKVDGAGGSLTQDDYEQFCSQLRKAAVSLFNRALVIDFANETLSHKLVLLSAKTYSLIYPKAKPASNQDAIAA
>NZ_LR594690.1|WP_162487215.1|423597_423963_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MFEPTFPQTRQALSAAGHRVRDENLACALLLLPHVGQGKASLGQALGDKKHPYSALRFQQLVTAEGPEELFTHVHRAIRFVEGQVSPFSIADLALNWTEGYADVLRKRLVADYHSVKLTAA
>NZ_LR594690.1|WP_068674097.1|422373_423543_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTKKFIQIHALTAYGANNLNRDELSRPKSEVFCGVPRLRLSSQCLKRAYRTSEVMADIMTGTRSRDLWFTLASEQVALGHPEAAVIAHIVPVRDAFEGSKSAAPKDEESGTDDADSETPPSEAKKGKGGKKKKGAAPLPATLAELKGNLFYASKSEVEFIKTVLADSLNPSGSTKGAPIEQKVVEGQILDLLMSVDVAMFGRMVAGNKPLSVEGGVQAAHAFTVHKATADDDFFTAVDDISPDEGSGHMGSNGFGAGVYYSYFNVDVDVLLKNLNGDKALAARAIEAFIEAVATVAPGGKQNTFAARSYAFYLAVEVGNAQPRSYADAFAAPVKGDDITGGAVAALRANREAAFQCFPSQRTEYREMFVAARQGSLPEVQALVAEAVAA
>NZ_LR594690.1|WP_083944147.1|421686_422364_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MHYLVLQLKAPLASFGSTSGEQRGTDGRPRRAAVVGLLAAALGIQRSEDSRFLALSNALSLGYVVLRTPTVLVDFHTVQAPAKQIGRTRREQLATGEPNSMVTRREYLQSGHWLVVLGGEESVLRTIADALCAPAFPLYLGRKSCALSAFTAPLVFAAETAEDAMREWSRRVGGTGHPCEREFFWEADLPTAVEPLVVHRRNDRRTALSRNSFSSRVEREGHLTL
>NZ_LR594690.1|WP_146039555.1|421027_421681_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MQLTHLTLPRTRESVAAYSRLVANKYVEHQALWSMLQARPDASREFLYRTEITDDGLEVYVLSPKALSPEGPWRARTREYAPKVRAGQLVGFSLRVSPTEDKAQGLNARSKRVDMVMDRYQAAGGEVDVQTIAQGVAADWLERREESSGFRVVDCSAGNYRRFDVTKRGQHMTKLSYLDITGTLEVQDPARFLTKLATGYGKAKFAGCGLMLLSAPK
>NZ_LR594690.1|WP_162487214.1|419378_420413_-|DGQHR-domain-containing-protein
MTALPGQLRAIARVERVGREEDGKLRGFQRHLVAKHIREISEYLQEGHAILPNPVVIAFVKGARVEQVAGKLHELVVTLRDGDGPGFVVDGQQRLEALVASGRTDFEVFCSVLICEDYAELRRQFVLINNTRPLPKQLVYELLPTVSSLPKRMSSRSFGSQVVEQLNYRADSSLRRAVSQHTNPKGVVRDTALQKLVMCSRSDGALREAPAETAVARSADLVSDFFWAVRDTWPCAWDEQTPRTSRLVHSAGIMALGFAMDYLHGVEGARTRQQFRAGLERIANECAWTHGSWRFSVDDVRPWNQVQNAGRDVSILANHLVRSLKETGRPRRRAARVGIQSALA
>NZ_LR594690.1|WP_146039554.1|418908_419163_-|hypothetical-protein
MNDLSAAGRKAWAREVERQMQSASLRGEACVVLAGRAYRDDLMRFLSTRFGDVHVPLAGLGILSQKAWLKRRLAQQAAGFAQAA
>NZ_LR594690.1|WP_146039553.1|418127_418748_-|hypothetical-protein
MLGESLYVWGSAEEYERNREKISVVDSMRWRHLRMGLSDSFPKGSRKRAFLANFERAVFLKTRPSAAERQRLWSEVAYLNLVPRLLNSRTHRPKDEDFVAGWNQFFPVAAALEAERCIVYGTEPKKIAALRAMPDVQILVQERLPAIVDTRPLHMRLVHGGRELELFFVRHPSAYFPWDEWGPVLRSRGVWLDSTSVPPAQVAEPA
>NZ_LR594690.1|WP_083944146.1|429025_431599_-|CRISPR-associated-helicase/endonuclease-Cas3
MTADFLTYWGKAHPLPGTTVAWHPLAYHSLDVAAVVGEYLRVNPSLSSTLARLLGMAEDAAIKVAMFLAGSHDVGKFGPFQAKVEELFAQLQPDQPVPSQAAQHHSQAGISTLLDWVSARWYPDSLEDAELALEPLLNASCGHHGRPVDLSNSTGVGKRTTAAAHAYLDAVADVLGLDSFVDLWDGGGYRQASSLLAGVLTLCDWVGSMQRFFPYRAPTMSLKCYFVEAQDQARTALVELSLAEKRPSAKAGLSHLFPAFTASATPLQRFADSVELDRAGPSLFILEDETGAGKTEAALTLASRLLQAGRGTGVLVSLPTQATADALCGRLLPLANMFFEAEGGVPSFSLAHGSASLSLARLRSEHLEAGSICADLDSWAQDSSKTALLSDVGVCTIDQVALSILPVKHFCLRQLGIGQKVLVVDEAHACDAYMLKLLETALEAHAMRGGSAILLSATLPRKHKAALVAAFRKGARWTGAQAVPVSTDYPLATVASSGGMVETPIAARRVSRFTRIQRIGDSATEALVLRLLAAGKCVLLLRNTVGRAQADFDTFFALLPGQVQLAHAKFVGKHRSENDRNLLEQFGKRSTSATRKGQLVIATQVAEQSLDVDFDELITDLAPIDALLQRIGRWRRHVRDADGKMAMAGDDARGEGLVYVVAPETHGNVDFLAELPANTMFVYPLPVVLFRTAQLVEERGGLQIPAGVREAVEFAYDEEAEAPAFLAFAEERSEGKIEAAKRAAKNVRLNLTVGYSQLIADVAPEQAVTRLGEKSVRVVLCDQGGAPLFGSMELSRLSLRASLLALEVDDTGHAKLRMGAAGSGEWEMLAVDHASKERLVRYSRTRGFSVGPPQRRR
>NZ_LR594690.1|WP_146039556.1|431748_432054_+|helix-turn-helix-domain-containing-protein
MEMDNLPKRIITSRERLGMTQKELAALVGVTLQAVRKMESDAGGVSAVNAFAVADALQVSARWLVTGVDAAGEPPKVPPSSSASRCTWPHCQRIAWTPWRR
>NZ_LR594690.1|WP_174262850.1|432441_435675_-|error-prone-DNA-polymerase
MAQSDCRHRARRTARAGRAGAVPVRCRRPASCAILYGHPVSWPPAMSALPAYAELRCVSNHTYLRGASQPEELVERASQLGYSALAIADECSLAGIVRAHVAAKEHGLKLLVGTQVQVACGHPFTLLVLACNLNGYGNLCEFITKLRRGSEKGKYELQFADLTAAALEDCVVVACPKRMSTPEQLETTGRWLLSEFRGRCWFGVDLLRLIDDEMWLYRLRQVSELTAIPLVAAGDVHFHVRSRKPLQDVLTATRVGRPLTECGLDLQPNAERHLRTRLRLAQTYPEDLLAETLNVAARCQFSLEELRYQYPDEVVPDGETPSSYLRRLTYEGAGRRWPEGVPAKVQLQIEHELTLIQELRYEHYFLTVADIVQFARSRNILCQGRGSAANSVVCYCVGVTEVDPARMSVLFERFISKERNEPPDIDIDFEHERREEVLQYLYRRYGRDRAAITGVVTSYRPKSAVRDVGKALGFDLEVVDQLAKNHQWFDGKAVMPERLVELGLSLDDLKVRQLMLLTGQLLGFPRHLSQHTGGFVLTRTALSRLIPIENASMKDRTVLEWDKDDLDALGFLKVDCLALGMLTAIRKCLDFIGQRKGFVFAMQDIPAEDPETYEMISRADTVGVFQIESRAQMSMLPRLKPRCFYDLVVEVALVRPGPIVGGMVHPYLRRRQGLEPVTYPSEALKEALGRTLGVPVFQEQVMQIAMLAAGFTAGEADGLRRAMAAWKRKGGLEKYHSKIVEGMTTRGYEKAFAEQIFEQIKGFSEYGFPESHAASFALLVYASSWIKRHHPAEFLTAMLNSQPLGFYSPSQLVQDAKRHGVVVRPPDVMHSNLDCTLEDLPHAPAVRLGLRLLAGLRWESAQRIVDERARGPFDNAEDLARRARLELAEMKLLASADALMSLSGHRRVAVWDAAALRSVPELLQEARVDEDVLELAPAPEGEEVMFDYAATGLTLRSHPLALLRPLLAKRGLATAADLQDVENGAEVRYCGLVTLRQQPETANGVIFVSLVDETGVVQVIAWRSIKEAQRQELLNARLLAVKGTWQREGELRSLVAERLKDLTPLLGRLRTTSRDFH
>NZ_LR594690.1|WP_068674082.1|435837_436860_+|transcriptional-regulator
MPATANQVDATSRKRKLDLADRLELGARLRKLREATGKTTLEIAEEVLGYQGSHAAVSRLERGVFSVVNLDHLDKLASRYATDSATLLKGTGDVETAALPEVTGEWSFDDIAPGIHFRLRDLRQALGLSRAQMATRLGHSTATVLKGWEERLATPRPDTILRIATEFGVSGSWLILGAKGKAPRPTQSMRLRALRHASDVSRNQLAMKVEPLDFQGLRTAISHAESGVRGLPSDRLQSIAKAFDVPADWLDPEGLRYAPATPIDAPAQSEADYLAGLPATVRSLVNNLVAMFTTGLLDSGDVASVNKELSRRAWKRATPSTAPVSGAQVGDVRRSRIVTA
>NZ_LR594690.1|WP_068674080.1|437169_446817_+|choice-of-anchor-D-domain-containing-protein
MRPSFKRFVCALLSATIVLQPALSAAASDFRYRIPIDIKLTGQADLEIQPELTDFGDVARTQMRTLPVKVVNHGGGAATDVTAVATAPFAVEKTCSTVPAHGECTMLVSFMPQEAGPQFGSLVLQGSNSRAEGSLIGNAVRLLTDLEISENGWNFGTWKLGTTSTVKQLAVKNVGNVPAIISQMYFLDGGSDFKVSHNCSTSLSPGAACIVAVNFIPTAMGQRVGALRVKSGDGSIRDVGMLGFGGDHTDPSEGAVDGRLSAPDSVSLGDVVVGEAPATKTITLANAGTKELTLGSPTLGGPDAALFSSSSTCGATLPAYATCQLALAFSPAVVGTFSAQLAIPTGAGQTTLTKTVALSGKGVSSAAKGQLSTNMSEVDFGTTTLGTAVSRVVRVTNAGPDVAEVTHTYATNSANFVVTTGCTAPLAAGEYCDLTVQYTASSVERSIGDLVIASQAGQNLLVHLKGHVPAPVLEVAPGSLQFEAMSQGDTSNYQEVTVTNVGSAPLEVTNVGLASTVEFNQENSCGSPLAPGASCAVRVQFTPNGSGTRETELLVVSNDPVNPAASVSLRGVGLSSELQFTPSRLAFGSVSMGSSSAPEDITISSVGAGNALISGVNIQGSGFSQVNTCGVKLPKGESCTVTVTYTPTAAASETGYLRVYSPQGVQMASLSGEGLTADQALVVDKRYLNFGSFEVGQGSSADIQVSNSGSEALSLNAPSLSGADAAAFTTSTTCGATLASSESCVVSVAFSAQALKPHAAALTVATAGGVQREVLLYGKGVDHVPAAVLTASPNPLSFGAATPASPATAALRISNAGPEAVSLVSVDSTDPTNFTSSETDCREPIAAGTHCDLPVRFLAGKDGLVTAQLNLRAENQQPLAVALTGQGPTPRISVAPTALDFGSVDFLATAPQQTVTVQNTGNARLALSGVGISGAFTQSNTCGPELAPSATCEIQVGFNPVSGGAQAGTLVISSNDPTMPTYSVALAGLSLLGSVAATPTELAFGQVAMGEHAAQVVSIYNPGPGGVGISSIALDGLNKTAFSFTSDCGPQLGKDKACSVTVRFSPQASGAHEAALAVVPQTGNRLTIPLTGNGPTARASVDSNSLAFGSVVVGESSAAQTVMLTNESTGPLNVYDISMATGAESFGVSSDCVSPLATGQSCPLYVSFTPASGGALTGALRLKTANSGGPLDVALTGTGLLPQAALSQPSVDFGTVYVGGTAESVVQVKNTGAYPVKVNSIGIPDNTWFQQNNACSQPLRAGEACDIALNVFPTTAGPQSSTLTVLTTAGTLTATLGATGQGVKLTRVTPSIADSNGGTLVSVLGAGFTAATRIFFGDVAASTIQVRGSTQLDVVAPAHATGVVDVTMTNDAGLTATLPQALRYAGAPVIASTTPATGSVAGGWPTLLQGRDFAEGMKVLVDGQAAQVTSVSADGSSATVVVPARLSPEAGTVDVVATTAVGNGTLSKGLAYVLPQGKLKLLGQGAFGNIAVGATYGRIFTLTNTGDLPTQLVGLSPEPSGTFSIGTNGTCPTALPAPLAVGASCTVEVLASNAAQGTVAGTLTASTGGPTGTQVSVSLSASFVQADYALSGTAGSMALVSGNYPTIIAMSEEGGANGTQQKIIYLNNVLKAAGTRIDAATVTITGADAGQFAITEVRKSSNSGSYSSSGASISGDRLTATGATVDAGSGTYPHLGVVVTFAPKAKGTFNAQLNIDYNGGSRAQLPLFGVAEYFSYAALSGTASANPVVAPNGDFGTLTFNDGAGLTSDALKRKFFLVSTSNAGKRLQATHLSIIGADAASFAITGYSYRATADGTLPAQDVRPANMRQGSVAEALLVEIAFSPMRAGAQEAQLVVEHNGDNAQPAVVNLTGTGAYDVSVQASGGPFIADIPPFPVTGVGASSTLDTYVRNTGTFGQVTWKSIQIVGSQAFSVKGVSLTNTGSTSSSALQAQPASTRYVNMNLVGADARTMGLSDLRALLAFSPTTTGVQTATVTVFHDGPGGKTTYTLTGEGRRAAAALSSTAAAPYVPASGDLGVAGFNAPGDASNGSVSKTLNVVNSNTLGLLRVTRLRITGADASAFAIESYPNQPGGYVPSPDVSPAAMVQGTASASLPFKVKFFPVKLGAHEAKLEVYHDGMNISPVVLPLSGTASRDVMLAVSEGTSATIVEPTPFADTLVGNTSNERSFYLRATGSAGAVTYTGASIEGTTDIALTGSGLVRQGGTAAVASAFYSRVASAEFNYVGANVAPTGGYTDLVLKFTFQPSSLSQQVAKVTVTHNGPGGKTTFLLTGNGVQPIAALSAASALAANPAPPISDFGVVSYNASNPSPTPTTLTNYVVNTAGVGSLRVNRMVITGPDASSFQFTSWTGQGTAPAANDVTPIGMVQTTSTGPHFKVTFLPAHMGVHTAQVAIYHNGGNTNPLVLPISGTAASDVNVTVSDLATSVQAPAPYPVTVAGTTASKLIYLRVTGTKGQVTYTGFKVEGSPSFGVTSSLNKYPKGTTSYGGIVKNYNPDVVREDAFSWAGEDISKSGAVTDLGITVRYAPTEVGTETAKVTVFHTGPGGKTEFLLSGSSIKPIVQFSGTNVSKPTAASGDMGVATYNGPTGAAAGTVLKDLYLVNTNKVGYASVPRMRIVGADASAFTFATWTNYSSAENTGQDVSPTSLKQNNVSTNLNVRLQFKPTKAGAHAAQLLIDHNGANTSPLTLDLSGAGERDVTGVFATVDFADNGLIPDFAPQASIANSAFGSSTKLVNLRVAGSRGRVTYSGFKVEGSPAFAVTTVYAVHHTGASKTQLFTYAAPGVTEGAAPYVGADVAGGAVLSDYGLNVTFAPTTLGAHTATLTVFHDGPGGQTSFRVNGAAQTEMQLSSRPDIADYEFGASLSSMAQVSAPLPVYIRRTTGTTPLQVGTVELSGPDADQFSILSVVNVTDNAGTQGTSLWSDSQGAQSAAVNASLAGATGAVNVVYRPSRTPGASGHTATLTVSRAGFASQSVQLTGSVASDGQGFARFRPKASWNLSQDNLIATAVSPNYVGIGPAGGIRAGKWYFEVTDASPPPVVNPTTNGDGSRNYYTYATNLMQVGVGIGSSTPGATNTLALAPGVFYDYQSGTSRYWTQFSAGYNTPAGYSVATDARLKLETYKAYGIAIDYDNRRLDIYVQTSSGCAKALSYSPKPEALADTSAWYPVINSNATKSMVLTKGEGGTFRCKPAGYEALRN
>NZ_LR594690.1|WP_146039557.1|446923_447319_+|hypothetical-protein
MSHLFSVKNFSLFSALQSTGTLARLCRGGGAQTPNDGLHRFVLRSPEVQAAVRRSTGLPDFRIRIAYPEDPIAAGFMAAANTLRLEVYTVEGKPVGEPQLLPNLDDDLAVAIEAELFHELLKSKGIDIPLL
>NZ_LR594690.1|WP_068674076.1|447728_449093_-|DNA-polymerase-Y-family-protein
MLWAALLPDSQLSDTQRTEAIRGLAVWCLQFTPRVSIIDAASASAAVVMELEASVRLFGGKRKLVERVKTEAEEMGVGQLAWAPTSLAAVAVARTGQSNGFSKPLQALLDALPVEVLASAAAHAAILERIGCQTLGQVRALPRGGLSRRFDKELLGALDQAYGLKPEAHAWVQLPDTFAAKLELMSRIEMAPALLFGARRLLLQLCAWLAARRSGTTAFTLKWCHDAMRAKAAGDGGELSVRTAEPTRNIEHLSRLLAENLAKVELLAPVGDLALVADDVRPLEENSFSLLPETLPDGEGLALVLERIAARLGPERVLRPVILEDHRPEWMCHWQPAPDKRPRQVARLLDCPQPTFILPKPLRLASRESQPLYQGPLKFLIGPHRIEHGWFDRVGESLTDQASPGKAATSDQVETRHVARDYFVALSEHAGLLWVYQTRLASEESAWFLHGVFA
>NZ_LR594690.1|WP_083944143.1|449037_449880_-|translesion-DNA-synthesis-associated-protein-ImuA
MAALLEWADDDDAPALPSRRVKPVLKPGELPASVEAALWRGDQLGSPVTKVVPTGFAALDAELPGGGWPARSLTELLQAQPTVLEWRLLAPAMRQVVADGKDIVIVGPPKAPHLPGLRDEGIDERRMVWIQAATPAERLWVTEQLVKANAAGMLVAWLPQARQEQIRRLQVCAQGCDSPVVLCRPAAAQHEPSAAPLRLQVSYGVDWELQVHLLKRKGSTHDGVLHLPSIPRGLAPLITPRLSKPSVLLAARKPRVTAGEPSDALGSVTSRQPALRHPAH
>NZ_LR594690.1|WP_146039558.1|450176_450368_+|hypothetical-protein
MKTAEHHWLEVKDMDGHSFGLVVAQWNPGARKWSHSGNVGTGLYLNSDYWRYVAPCPMPDFPA
>NZ_LR594690.1|WP_068674072.1|450490_451048_-|nucleoside-2-deoxyribosyltransferase
MREQPARPHVYLAGPDVFFPERAEIFKALKAHCEQLGMVALVPSDGGLPDGFGGTEDEIAQRIYDANIELIQRADGIAANLVNFRGTEPDSGTVYEVGFAVALKKPVVAYGVPAGTYASRVAATLPCESDGRGGQCETATKVHVEGLGQRLNLMLSRSAEIAPSARAALDRIASHFQQVGLLQAQ

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Crispr_ID: NZ_LR594690_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR594690_5

676352-676508

Orphan

Consensus_repeat	Method
ACATGTGAGCTTTTTGAGGGACCT	PILER-CR
TGTGAGCTTTTTGAGGGACCTTC	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_LR594690_5

>merge|NZ_LR594690|5|676352-676508|PILER-CR,CRISPRCasFinder
ACATGTGAGCTTTTTTGAGGGAGAGTCATGTGCACGTGTCGGCCAGGCCCGGGCAGTTGTGAGCTTTTTGAGGGACCTTCCCTGGACAGGCCGACCTGTGAGTGTTTCGAGGGACTGAGAATCCGTGCGCGACCTGTGAGCTTTTTGAGGGACCTAC

>NZ_LR594690|5|2|676352-676506|PILER-CR
ACATGTGAGCTTTTTTGAGGGAGA	GTCATGTGCACGTGTCGGCCAGGCCCGGGCAGTTGTGAG
CTTTTTGAGGGACCTTCCCTGGAC	AGGCCGACCTGTGAGTGTTTCGAGGGACTGAGAATCCGTGCGCGACCTGTGAG
CTTTTTGAGGGACCT

>NZ_LR594690|5|4|676409-676508|CRISPRCasFinder
TGTGAGCTTTTTGAGGGACCTTC	CCTGGACAGGCCGACC
TGTGAGTGTTTCGAGGGACTGAG	AATCCGTGCGCGACC
TGTGAGCTTTTTGAGGGACCTAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR594690.1\|WP_068673868.1\|680652_680934_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594690.1\|WP_068673866.1\|681017_681311_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594690.1\|WP_068673858.1\|683570_683900_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594690.1\|WP_068673891.1\|670561_670906_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594690.1\|WP_068673887.1\|671919_672795_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|153427
NZ_LR594690.1\|WP_068673873.1\|678187_678946_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594690.1\|WP_068673864.1\|681405_682110_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594690.1\|WP_068673889.1\|671099_671654_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594690.1\|WP_068673897.1\|668847_669093_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594690.1\|WP_068673880.1\|674887_675376_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594690.1\|WP_068673882.1\|674591_674813_+\|DUF2158-domain-containing-protein	unknown	unknown	gnl\|CDD\|378312
NZ_LR594690.1\|WP_068673893.1\|670021_670459_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594690.1\|WP_068673886.1\|672856_674005_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594690.1\|WP_068673884.1\|674119_674431_+\|thioredoxin	unknown	unknown	gnl\|CDD\|200072
NZ_LR594690.1\|WP_146039457.1\|682750_683170_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594690.1\|WP_068673860.1\|683183_683528_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594690.1\|WP_068673872.1\|679211_680012_-\|VWA-domain-containing-protein	unknown	unknown	gnl\|CDD\|238119
NZ_LR594690.1\|WP_068673875.1\|676688_678191_+\|replication-initiation-protein	unknown	unknown	gnl\|CDD\|376444
NZ_LR594690.1\|WP_068673870.1\|680001_680358_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594690.1\|WP_068673895.1\|669210_669933_-\|DUF262-domain-containing-protein	unknown	unknown	gnl\|CDD\|377008

Protein	Function_ID	Function_description	E-value
NZ_LR594690.1\|WP_068673882.1\|674591_674813_+\|DUF2158-domain-containing-protein	gnl\|CDD\|378312	pfam09926, DUF2158, Uncharacterized small protein (DUF2158). Members of this family of prokaryotic proteins have no known function.	1.2582e-07
NZ_LR594690.1\|WP_068673884.1\|674119_674431_+\|thioredoxin	gnl\|CDD\|200072	TIGR01068, Thioredoxin-like_protein_slr0233, thioredoxin. Several proteins, such as protein disulfide isomerase, have two or more copies of a domain closely related to thioredoxin. This model is designed to recognize authentic thioredoxin, a small protein that should be hit exactly once by this model. Any protein that hits once with a score greater than the second (per domain) trusted cutoff may be taken as thioredoxin. [Energy metabolism, Electron transport].	5.26732e-40
NZ_LR594690.1\|WP_068673887.1\|671919_672795_+\|hypothetical-protein	gnl\|CDD\|153427	cd07998, WGR_DNA_ligase, WGR domain of bacterial DNA ligases. The WGR domain is found in a small family of predicted bacterial DNA ligases. It has been called WGR after the most conserved central motif of the domain. The domain typically occurs in together with an ATP-dependent DNA ligase domain, and is between 70 and 80 residues in length. It has been proposed to function as a nucleic acid binding domain.	6.13019e-13
NZ_LR594690.1\|WP_068673872.1\|679211_680012_-\|VWA-domain-containing-protein	gnl\|CDD\|238119	cd00198, vWFA, Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains.	2.63623e-08
NZ_LR594690.1\|WP_068673875.1\|676688_678191_+\|replication-initiation-protein	gnl\|CDD\|376444	pfam01051, Rep_3, Initiator Replication protein. This protein is an initiator of plasmid replication. RepB possesses nicking-closing (topoisomerase I) like activity. It is also able to perform a strand transfer reaction on ssDNA that contains its target. This family also includes RepA which is an E.coli protein involved in plasmid replication. The RepA protein binds to DNA repeats that flank the repA gene.	1.8445e-09
NZ_LR594690.1\|WP_068673895.1\|669210_669933_-\|DUF262-domain-containing-protein	gnl\|CDD\|377008	pfam03235, DUF262, Protein of unknown function DUF262.	9.76679e-12

>NZ_LR594690.1|WP_068673880.1|674887_675376_-|hypothetical-protein
MLKPLIALTAALYLGSGAASAPPPAAPADGAFQLLQVGDAPQGGCGTYVHSRGTLPGAASVMFMSTDRVLFLRTADGVRTLELASLDQKLRVKDVLGRGDTLNLKFRAPGKERAWLVATVSEAVVDDDGGYPLIAFDVKGGYISPTGARFDSPNLVAHDTCL
>NZ_LR594690.1|WP_068673882.1|674591_674813_+|DUF2158-domain-containing-protein
MAIKLAVGDVVELKSGGPLLTVVKDRVEQGSKFVQVAWFDGAAVLKQEVLPKDSLQVKGVKPSPEGAAVPTAE
>NZ_LR594690.1|WP_068673884.1|674119_674431_+|thioredoxin
MVASITDSTFEQDVVKSDVPVLVDFWAPWCGPCKLLAPVLDQLAANHEGKLKVVKVNIDEDREHAKKLAIRGVPTLVLYRDGEVVARASGAQSLGKLEAMVAA
>NZ_LR594690.1|WP_068673886.1|672856_674005_-|hypothetical-protein
MTPQDLAQSFYAFARGDEAHRRALIEDMFEMLDARNSLKLMRLSVELTRLNDDGALSAFDALMGMLTCEPVPLRGFPTSGWRAYALSTIFERPAGAVLSLAANPRVIARSIAASTGIPVEDIRVVAGQVATQDAYLMPPADVFRFCRELKTAMEVESNLVGALARRQRLANRLAPVLALDAVNGWRAPEAHPVNDEALFMVLIRGDITPGENDSDAGRPALTFSARYEMDGGIAEPLEIHHTVLGFGTPWEVFRASLHTAQAFGLCRLMAQAAVDHRCDPAQLQVSLAFVDHPDGESMTARAAVIHPEKGLLTGVIEHDLAEPDQYAAAVRRMMGNLRFGALSVSDSAFGCGEVDKGGTFRFLVPGKGWQEAPETFVAFPPV
>NZ_LR594690.1|WP_068673887.1|671919_672795_+|hypothetical-protein
MSYSSKVLKLYFSKGTSDKEYHIVIEAMAGGYRVYGLNGRRGNATTLQTKASGPVSLRAAEAAFHAVVEEKRKKQYTTDWSGRPGAGIDFSAAIISGTAPASVVSPVMTAMEAEHLVPAPWLGSGPDIDEALLSGESGTSAQLLPAGERLMALATVGNPLVVSADDGKPGFLPKDVLDELEAALPQYVLDGCYAAGTFVICDGYSLKDTAAGQGAPFADRIRSIEAGLRRRKLAPSHVMLQQVFFDSDIPQGVYMLAKPGSDVLVRRNHLPYQRAAATNAAEAYVCRLTVD
>NZ_LR594690.1|WP_068673889.1|671099_671654_-|hypothetical-protein
MGLRFYLHRFVACDADGLHDHPFLRSLSLILAGWYYEDRWSGRVVKRFLNYIGPECFHRVVLPREAQHDVWTLFIHSARVKQWGALRPAFKGRHGPVLLYEPQSEPTDPEFSNWHLRAATGAQLRANPALNISGPAFSIELGKNAYAVGLAKYPESAHRHSLDIDQAGLPEDPNPGQRAAVQMG
>NZ_LR594690.1|WP_068673891.1|670561_670906_-|hypothetical-protein
MAPKAYMALRRLWTVKVFSRGLADRRPAAPLAQAALVVVRRSAGELDWDNAYGGLKPILDCLVVKSSKNPSGLGLVTDDSPKHMPYPPWVVQRSAPRGRGNVHFAIFDLAPAAA
>NZ_LR594690.1|WP_068673893.1|670021_670459_-|hypothetical-protein
MEIANFIGSLVTLALVVAAVGGMTKVLIVSVWEQGLLGKQISGAEAFLAMLKAMLKLSRFFMSHMLATGCSVAMLFASIVMDANFTASLGYSTIAFAIAVLATPSAMRVLRASALSFVLRLKLRSKPLLFSEPLIHHSQASRLHS
>NZ_LR594690.1|WP_068673895.1|669210_669933_-|DUF262-domain-containing-protein
MNIQQNSVFLSNLLKDLTNARLLPAGFQRPYVWTRADVMALLESILRGYPIGAFLLWSPYGRADISQAGRTRLGPVHMLRGDSTSSLLLDGQNRLATLAWVARDEASPLPDDLTTAERAVWADGKALVANLREKKLEFVDQAEADSGFRLPARALLSSLVASPLMRRRWTNEWAGFGETVLNDGLKWFDEASGAFSGARVVVTEMEYATAQEAKDAFLHICKVGVPMAASDFDAALSWVP
>NZ_LR594690.1|WP_068673897.1|668847_669093_+|hypothetical-protein
MPNKIVFIGNWRFFEGRKYWHTDIDLVADMRRKGVRDGKLHGVALEAFVVACLRTPDYQVLGVPMDAQDYAAVSAAALEAA
>NZ_LR594690.1|WP_068673875.1|676688_678191_+|replication-initiation-protein
MAKVIGVTGEILTDDSRQLSLLADSNLPERLRKAVEVVHMYPVSGQYSHFCRRVFNALLLVTTKGWQSIPSELQAKVLDERRVLRFAATVGELGKVLRATTRATERIYDAVENLYGQEFRFDAMGERGDMYKVASRLISQYSRSSDGSGEVQWEFPPDVFEMLMSPGRWAAIDIHLANRFNSGHSLALYENTHRYIRVQLTARMPVVDWVKLLVSPDAAETFLQQGNYRYFKRDILLPAMRELESTEACPFSVELLETTGSRNKVTHLQFRLHLKVQAALDMDTSQTGDPRLEAKLREYGITERGIDQLLTKYDEPVLRLHIAAFDKRLAEGGIRDKAAAFVHQVKNDYYGRSPQQEGQADAPALPAPAVDTRKQDEADFAKHIAQRVRKYYLGQPRFVQDQLLQAFLNSPDTPNLVREQFAKKGFKTPAVSGTFYAWMAKQEGVLSLPEDASLDAYLDWRNEPKSSKGPRVLSTKLSVGGPTSSGRRKKAASPREVPAD
>NZ_LR594690.1|WP_068673873.1|678187_678946_-|hypothetical-protein
MNPAAHVAQLLEQSPDLAGAVAKAAECSVPLLQRAMDDYGLLSPLQWAQIAECAEVPATWLGSGEPWHPDMIRALQRNSRAKASSVELQRLRRGNLRRLADACTHTTHLATLLNTAPSMLSDLMNSETRAASQRRAFGPRRARAMEDALGLPDGWLDRDEPVPPALGMRARQLSSAPRTRAIAARGPSVGGAAGLGDWPLPTAVAPIHQTVLAKYLDLAKAGVVDEAFAYSLLGTLLDKERPPGAAVAAITG
>NZ_LR594690.1|WP_068673872.1|679211_680012_-|VWA-domain-containing-protein
MLNNPRLGPLVLPYLGLTVQPHVRPTLPAFELPAAIQRLLARSVEDCRAERSRPAVGEQTTHAALLLDESWSMNRHRAAALAGYNHQVGVIKEGAKEAGKTLVTLNVFSSTPREVLSAAPTEQLSPLPEEEYTPTGGTALYDAIGDTIASLLARPDADSPSTAFLVAPFTDGEDTSSYRYPPQLLRELVAKLEATGRWTFTLVGPTGQVDEFAAALNLQAGNIKAYDATKTESVTSAFTEMAGASTRYMAMRSAGVMASASLYAGR
>NZ_LR594690.1|WP_068673870.1|680001_680358_-|hypothetical-protein
MAESSFRRVEGYIASNEKERVDRVRQELQVTSDVAVAGLVRLGLSAYESAMRQGHVTSLQATSSDWLTASGGVQGACANSAQANFPTTPSAASPELVHTPTNPIAQFFKSRKETHRAQ
>NZ_LR594690.1|WP_068673868.1|680652_680934_+|hypothetical-protein
MPVLVPAAYCLVVMLLAAWFAMDALTLPIGRGLKRYAIVVCALSAAPLLHLLESRAQAPGWTTAIFLGWALALASVAVLRDRRLAQTRAAKPA
>NZ_LR594690.1|WP_068673866.1|681017_681311_+|hypothetical-protein
MQTVFAIAILAVVIASTSVLVTMLIEQVKAERRVAAEKAAKHQRLRTLEMNLRHLEADSKSRKLSQAEMDDYAAFIAERNDLSAALFPQRNPSLAFA
>NZ_LR594690.1|WP_068673864.1|681405_682110_+|hypothetical-protein
MNQDSNTGLSVRYLLTVQGQPEELEVFVTSVRHPTDGDKLFQPSRAVPVPAGLEAVDPFAIPYYHFIQNQYRMAAEALEALNEEPNLVALLKDPAKHQEARVLLNRTLDTEALAGVALVRKNVRQYNALTRAQWAQKNWGQFDDRLTCAQFERVTNRRGQYHFTWHTLDVRILDQLGALHPTLAFGLVGVDELNLKQAYGWHCEGSSTFHHGAGAVDPGRPTWLDHLPAAFSVA
>NZ_LR594690.1|WP_146039457.1|682750_683170_+|hypothetical-protein
MSLDLIPNEVARYGLRADWHSMNVVVVKRRGASSKNAGQEYEETLAYCRDVRNASLWLFNHIIRANGADAQAAAEVTTRSLADVEALMAVVDEAQRHVLAAVESLETNLAALGLSQKELVKALAAADTPAKADGESSGQ
>NZ_LR594690.1|WP_068673860.1|683183_683528_+|hypothetical-protein
MSGEFSYRLRNDLYELYQGEKLLGQPMLAVSLALDEVSGAVLQHGSPELVEPWGMDRRAKLRADKNSAEAERLVVLTGRIPVVELNRCFTQPGHAAEVLARARAGTLEPEPTNS
>NZ_LR594690.1|WP_068673858.1|683570_683900_+|hypothetical-protein
MPNSIEPRPDHHGGEHDAPELLRDRLAAAYDDEMLFLDPPSLDKAIVGVAERINLGPVVVYDRNKLVQAFAEEGMTEEEADEWVSFNVEGAFVGERTPLILCSVDPLAP

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Crispr_ID: NZ_LR594690_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR594690_4

676164-676343

Orphan

Consensus_repeat	Method
TGTGAGCTTTTTGAGGGACCTTC	CRISPRCasFinder

3 spacers

The CRISPR arrays of NZ_LR594690_4

>merge|NZ_LR594690|4|676164-676343|CRISPRCasFinder
TGTGAGTCTTTTGAGGGGCAAATGTGAGCGAATTGAGGGACACCCGGAGCTTTTGGAGGGACCGTTGTGAGCATAAGGAGGGCGCATAAAGCCCCACATGTGAGCGTTTTGAGGGACTGGGCTGTGGATAACCGGCCAGCTTCGCAAAGGACGACATGTGAGCTTTTTGAGGGATACCCG

>NZ_LR594690|4|3|676164-676343|CRISPRCasFinder
TGTGAGTCTTTTGAGGGGCAAAT	GTGAGCGAATTGAGGGACAC
CCGGAGCTTTTGGAGGGACCGTT	GTGAGCATAAGGAGGGCGCATAAAGCCCCACA
TGTGAGCGTTTTGAGGGACTGGG	CTGTGGATAACCGGCCAGCTTCGCAAAGGACGACA
TGTGAGCTTTTTGAGGGATACCCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR594690.1\|WP_068673868.1\|680652_680934_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594690.1\|WP_068673866.1\|681017_681311_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594690.1\|WP_068673858.1\|683570_683900_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594690.1\|WP_068673891.1\|670561_670906_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594690.1\|WP_068673887.1\|671919_672795_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|153427
NZ_LR594690.1\|WP_068673873.1\|678187_678946_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594690.1\|WP_068673864.1\|681405_682110_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594690.1\|WP_068673889.1\|671099_671654_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594690.1\|WP_068673897.1\|668847_669093_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594690.1\|WP_068673880.1\|674887_675376_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594690.1\|WP_068673882.1\|674591_674813_+\|DUF2158-domain-containing-protein	unknown	unknown	gnl\|CDD\|378312
NZ_LR594690.1\|WP_068673893.1\|670021_670459_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594690.1\|WP_068673886.1\|672856_674005_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594690.1\|WP_068673884.1\|674119_674431_+\|thioredoxin	unknown	unknown	gnl\|CDD\|200072
NZ_LR594690.1\|WP_146039457.1\|682750_683170_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594690.1\|WP_068673860.1\|683183_683528_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594690.1\|WP_068673872.1\|679211_680012_-\|VWA-domain-containing-protein	unknown	unknown	gnl\|CDD\|238119
NZ_LR594690.1\|WP_068673875.1\|676688_678191_+\|replication-initiation-protein	unknown	unknown	gnl\|CDD\|376444
NZ_LR594690.1\|WP_068673870.1\|680001_680358_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594690.1\|WP_068673895.1\|669210_669933_-\|DUF262-domain-containing-protein	unknown	unknown	gnl\|CDD\|377008

Protein	Function_ID	Function_description	E-value
NZ_LR594690.1\|WP_068673882.1\|674591_674813_+\|DUF2158-domain-containing-protein	gnl\|CDD\|378312	pfam09926, DUF2158, Uncharacterized small protein (DUF2158). Members of this family of prokaryotic proteins have no known function.	1.2582e-07
NZ_LR594690.1\|WP_068673884.1\|674119_674431_+\|thioredoxin	gnl\|CDD\|200072	TIGR01068, Thioredoxin-like_protein_slr0233, thioredoxin. Several proteins, such as protein disulfide isomerase, have two or more copies of a domain closely related to thioredoxin. This model is designed to recognize authentic thioredoxin, a small protein that should be hit exactly once by this model. Any protein that hits once with a score greater than the second (per domain) trusted cutoff may be taken as thioredoxin. [Energy metabolism, Electron transport].	5.26732e-40
NZ_LR594690.1\|WP_068673887.1\|671919_672795_+\|hypothetical-protein	gnl\|CDD\|153427	cd07998, WGR_DNA_ligase, WGR domain of bacterial DNA ligases. The WGR domain is found in a small family of predicted bacterial DNA ligases. It has been called WGR after the most conserved central motif of the domain. The domain typically occurs in together with an ATP-dependent DNA ligase domain, and is between 70 and 80 residues in length. It has been proposed to function as a nucleic acid binding domain.	6.13019e-13
NZ_LR594690.1\|WP_068673872.1\|679211_680012_-\|VWA-domain-containing-protein	gnl\|CDD\|238119	cd00198, vWFA, Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains.	2.63623e-08
NZ_LR594690.1\|WP_068673875.1\|676688_678191_+\|replication-initiation-protein	gnl\|CDD\|376444	pfam01051, Rep_3, Initiator Replication protein. This protein is an initiator of plasmid replication. RepB possesses nicking-closing (topoisomerase I) like activity. It is also able to perform a strand transfer reaction on ssDNA that contains its target. This family also includes RepA which is an E.coli protein involved in plasmid replication. The RepA protein binds to DNA repeats that flank the repA gene.	1.8445e-09
NZ_LR594690.1\|WP_068673895.1\|669210_669933_-\|DUF262-domain-containing-protein	gnl\|CDD\|377008	pfam03235, DUF262, Protein of unknown function DUF262.	9.76679e-12

>NZ_LR594690.1|WP_068673880.1|674887_675376_-|hypothetical-protein
MLKPLIALTAALYLGSGAASAPPPAAPADGAFQLLQVGDAPQGGCGTYVHSRGTLPGAASVMFMSTDRVLFLRTADGVRTLELASLDQKLRVKDVLGRGDTLNLKFRAPGKERAWLVATVSEAVVDDDGGYPLIAFDVKGGYISPTGARFDSPNLVAHDTCL
>NZ_LR594690.1|WP_068673882.1|674591_674813_+|DUF2158-domain-containing-protein
MAIKLAVGDVVELKSGGPLLTVVKDRVEQGSKFVQVAWFDGAAVLKQEVLPKDSLQVKGVKPSPEGAAVPTAE
>NZ_LR594690.1|WP_068673884.1|674119_674431_+|thioredoxin
MVASITDSTFEQDVVKSDVPVLVDFWAPWCGPCKLLAPVLDQLAANHEGKLKVVKVNIDEDREHAKKLAIRGVPTLVLYRDGEVVARASGAQSLGKLEAMVAA
>NZ_LR594690.1|WP_068673886.1|672856_674005_-|hypothetical-protein
MTPQDLAQSFYAFARGDEAHRRALIEDMFEMLDARNSLKLMRLSVELTRLNDDGALSAFDALMGMLTCEPVPLRGFPTSGWRAYALSTIFERPAGAVLSLAANPRVIARSIAASTGIPVEDIRVVAGQVATQDAYLMPPADVFRFCRELKTAMEVESNLVGALARRQRLANRLAPVLALDAVNGWRAPEAHPVNDEALFMVLIRGDITPGENDSDAGRPALTFSARYEMDGGIAEPLEIHHTVLGFGTPWEVFRASLHTAQAFGLCRLMAQAAVDHRCDPAQLQVSLAFVDHPDGESMTARAAVIHPEKGLLTGVIEHDLAEPDQYAAAVRRMMGNLRFGALSVSDSAFGCGEVDKGGTFRFLVPGKGWQEAPETFVAFPPV
>NZ_LR594690.1|WP_068673887.1|671919_672795_+|hypothetical-protein
MSYSSKVLKLYFSKGTSDKEYHIVIEAMAGGYRVYGLNGRRGNATTLQTKASGPVSLRAAEAAFHAVVEEKRKKQYTTDWSGRPGAGIDFSAAIISGTAPASVVSPVMTAMEAEHLVPAPWLGSGPDIDEALLSGESGTSAQLLPAGERLMALATVGNPLVVSADDGKPGFLPKDVLDELEAALPQYVLDGCYAAGTFVICDGYSLKDTAAGQGAPFADRIRSIEAGLRRRKLAPSHVMLQQVFFDSDIPQGVYMLAKPGSDVLVRRNHLPYQRAAATNAAEAYVCRLTVD
>NZ_LR594690.1|WP_068673889.1|671099_671654_-|hypothetical-protein
MGLRFYLHRFVACDADGLHDHPFLRSLSLILAGWYYEDRWSGRVVKRFLNYIGPECFHRVVLPREAQHDVWTLFIHSARVKQWGALRPAFKGRHGPVLLYEPQSEPTDPEFSNWHLRAATGAQLRANPALNISGPAFSIELGKNAYAVGLAKYPESAHRHSLDIDQAGLPEDPNPGQRAAVQMG
>NZ_LR594690.1|WP_068673891.1|670561_670906_-|hypothetical-protein
MAPKAYMALRRLWTVKVFSRGLADRRPAAPLAQAALVVVRRSAGELDWDNAYGGLKPILDCLVVKSSKNPSGLGLVTDDSPKHMPYPPWVVQRSAPRGRGNVHFAIFDLAPAAA
>NZ_LR594690.1|WP_068673893.1|670021_670459_-|hypothetical-protein
MEIANFIGSLVTLALVVAAVGGMTKVLIVSVWEQGLLGKQISGAEAFLAMLKAMLKLSRFFMSHMLATGCSVAMLFASIVMDANFTASLGYSTIAFAIAVLATPSAMRVLRASALSFVLRLKLRSKPLLFSEPLIHHSQASRLHS
>NZ_LR594690.1|WP_068673895.1|669210_669933_-|DUF262-domain-containing-protein
MNIQQNSVFLSNLLKDLTNARLLPAGFQRPYVWTRADVMALLESILRGYPIGAFLLWSPYGRADISQAGRTRLGPVHMLRGDSTSSLLLDGQNRLATLAWVARDEASPLPDDLTTAERAVWADGKALVANLREKKLEFVDQAEADSGFRLPARALLSSLVASPLMRRRWTNEWAGFGETVLNDGLKWFDEASGAFSGARVVVTEMEYATAQEAKDAFLHICKVGVPMAASDFDAALSWVP
>NZ_LR594690.1|WP_068673897.1|668847_669093_+|hypothetical-protein
MPNKIVFIGNWRFFEGRKYWHTDIDLVADMRRKGVRDGKLHGVALEAFVVACLRTPDYQVLGVPMDAQDYAAVSAAALEAA
>NZ_LR594690.1|WP_068673875.1|676688_678191_+|replication-initiation-protein
MAKVIGVTGEILTDDSRQLSLLADSNLPERLRKAVEVVHMYPVSGQYSHFCRRVFNALLLVTTKGWQSIPSELQAKVLDERRVLRFAATVGELGKVLRATTRATERIYDAVENLYGQEFRFDAMGERGDMYKVASRLISQYSRSSDGSGEVQWEFPPDVFEMLMSPGRWAAIDIHLANRFNSGHSLALYENTHRYIRVQLTARMPVVDWVKLLVSPDAAETFLQQGNYRYFKRDILLPAMRELESTEACPFSVELLETTGSRNKVTHLQFRLHLKVQAALDMDTSQTGDPRLEAKLREYGITERGIDQLLTKYDEPVLRLHIAAFDKRLAEGGIRDKAAAFVHQVKNDYYGRSPQQEGQADAPALPAPAVDTRKQDEADFAKHIAQRVRKYYLGQPRFVQDQLLQAFLNSPDTPNLVREQFAKKGFKTPAVSGTFYAWMAKQEGVLSLPEDASLDAYLDWRNEPKSSKGPRVLSTKLSVGGPTSSGRRKKAASPREVPAD
>NZ_LR594690.1|WP_068673873.1|678187_678946_-|hypothetical-protein
MNPAAHVAQLLEQSPDLAGAVAKAAECSVPLLQRAMDDYGLLSPLQWAQIAECAEVPATWLGSGEPWHPDMIRALQRNSRAKASSVELQRLRRGNLRRLADACTHTTHLATLLNTAPSMLSDLMNSETRAASQRRAFGPRRARAMEDALGLPDGWLDRDEPVPPALGMRARQLSSAPRTRAIAARGPSVGGAAGLGDWPLPTAVAPIHQTVLAKYLDLAKAGVVDEAFAYSLLGTLLDKERPPGAAVAAITG
>NZ_LR594690.1|WP_068673872.1|679211_680012_-|VWA-domain-containing-protein
MLNNPRLGPLVLPYLGLTVQPHVRPTLPAFELPAAIQRLLARSVEDCRAERSRPAVGEQTTHAALLLDESWSMNRHRAAALAGYNHQVGVIKEGAKEAGKTLVTLNVFSSTPREVLSAAPTEQLSPLPEEEYTPTGGTALYDAIGDTIASLLARPDADSPSTAFLVAPFTDGEDTSSYRYPPQLLRELVAKLEATGRWTFTLVGPTGQVDEFAAALNLQAGNIKAYDATKTESVTSAFTEMAGASTRYMAMRSAGVMASASLYAGR
>NZ_LR594690.1|WP_068673870.1|680001_680358_-|hypothetical-protein
MAESSFRRVEGYIASNEKERVDRVRQELQVTSDVAVAGLVRLGLSAYESAMRQGHVTSLQATSSDWLTASGGVQGACANSAQANFPTTPSAASPELVHTPTNPIAQFFKSRKETHRAQ
>NZ_LR594690.1|WP_068673868.1|680652_680934_+|hypothetical-protein
MPVLVPAAYCLVVMLLAAWFAMDALTLPIGRGLKRYAIVVCALSAAPLLHLLESRAQAPGWTTAIFLGWALALASVAVLRDRRLAQTRAAKPA
>NZ_LR594690.1|WP_068673866.1|681017_681311_+|hypothetical-protein
MQTVFAIAILAVVIASTSVLVTMLIEQVKAERRVAAEKAAKHQRLRTLEMNLRHLEADSKSRKLSQAEMDDYAAFIAERNDLSAALFPQRNPSLAFA
>NZ_LR594690.1|WP_068673864.1|681405_682110_+|hypothetical-protein
MNQDSNTGLSVRYLLTVQGQPEELEVFVTSVRHPTDGDKLFQPSRAVPVPAGLEAVDPFAIPYYHFIQNQYRMAAEALEALNEEPNLVALLKDPAKHQEARVLLNRTLDTEALAGVALVRKNVRQYNALTRAQWAQKNWGQFDDRLTCAQFERVTNRRGQYHFTWHTLDVRILDQLGALHPTLAFGLVGVDELNLKQAYGWHCEGSSTFHHGAGAVDPGRPTWLDHLPAAFSVA
>NZ_LR594690.1|WP_146039457.1|682750_683170_+|hypothetical-protein
MSLDLIPNEVARYGLRADWHSMNVVVVKRRGASSKNAGQEYEETLAYCRDVRNASLWLFNHIIRANGADAQAAAEVTTRSLADVEALMAVVDEAQRHVLAAVESLETNLAALGLSQKELVKALAAADTPAKADGESSGQ
>NZ_LR594690.1|WP_068673860.1|683183_683528_+|hypothetical-protein
MSGEFSYRLRNDLYELYQGEKLLGQPMLAVSLALDEVSGAVLQHGSPELVEPWGMDRRAKLRADKNSAEAERLVVLTGRIPVVELNRCFTQPGHAAEVLARARAGTLEPEPTNS
>NZ_LR594690.1|WP_068673858.1|683570_683900_+|hypothetical-protein
MPNSIEPRPDHHGGEHDAPELLRDRLAAAYDDEMLFLDPPSLDKAIVGVAERINLGPVVVYDRNKLVQAFAEEGMTEEEADEWVSFNVEGAFVGERTPLILCSVDPLAP

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_LR594690_1	1.1\|2400\|49\|NZ_LR594690\|CRISPRCasFinder	2400-2448	49	NZ_LR594690	Variovorax sp. WDL1 plasmid 2	2400-2448	0	1.0
NZ_LR594690_2	2.1\|425883\|32\|NZ_LR594690\|CRISPRCasFinder,CRT	425883-425914	32	NZ_LR594660	Variovorax sp. PBL-H6 plasmid 2	358401-358432	0	1.0
NZ_LR594690_2	2.1\|425883\|32\|NZ_LR594690\|CRISPRCasFinder,CRT	425883-425914	32	NZ_LR594667	Variovorax sp. SRS16 plasmid 2	441970-442001	0	1.0
NZ_LR594690_2	2.1\|425883\|32\|NZ_LR594690\|CRISPRCasFinder,CRT	425883-425914	32	NZ_LR594690	Variovorax sp. WDL1 plasmid 2	425883-425914	0	1.0
NZ_LR594690_2	2.1\|425883\|32\|NZ_LR594690\|CRISPRCasFinder,CRT	425883-425914	32	NZ_LR594672	Variovorax sp. PBL-E5 plasmid 2	442104-442135	0	1.0
NZ_LR594690_2	2.2\|425944\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	425944-425975	32	NZ_LR594660	Variovorax sp. PBL-H6 plasmid 2	358340-358371	0	1.0
NZ_LR594690_2	2.2\|425944\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	425944-425975	32	NZ_LR594667	Variovorax sp. SRS16 plasmid 2	442031-442062	0	1.0
NZ_LR594690_2	2.2\|425944\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	425944-425975	32	NZ_LR594690	Variovorax sp. WDL1 plasmid 2	425944-425975	0	1.0
NZ_LR594690_2	2.2\|425944\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	425944-425975	32	NZ_LR594672	Variovorax sp. PBL-E5 plasmid 2	442165-442196	0	1.0
NZ_LR594690_2	2.3\|426005\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426005-426036	32	NZ_LR594660	Variovorax sp. PBL-H6 plasmid 2	358279-358310	0	1.0
NZ_LR594690_2	2.3\|426005\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426005-426036	32	NZ_LR594667	Variovorax sp. SRS16 plasmid 2	442092-442123	0	1.0
NZ_LR594690_2	2.3\|426005\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426005-426036	32	NZ_LR594690	Variovorax sp. WDL1 plasmid 2	426005-426036	0	1.0
NZ_LR594690_2	2.3\|426005\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426005-426036	32	NZ_LR594672	Variovorax sp. PBL-E5 plasmid 2	442226-442257	0	1.0
NZ_LR594690_2	2.4\|426066\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426066-426097	32	NZ_LR594660	Variovorax sp. PBL-H6 plasmid 2	358218-358249	0	1.0
NZ_LR594690_2	2.4\|426066\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426066-426097	32	NZ_LR594667	Variovorax sp. SRS16 plasmid 2	442153-442184	0	1.0
NZ_LR594690_2	2.4\|426066\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426066-426097	32	NZ_LR594690	Variovorax sp. WDL1 plasmid 2	426066-426097	0	1.0
NZ_LR594690_2	2.4\|426066\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426066-426097	32	NZ_LR594672	Variovorax sp. PBL-E5 plasmid 2	442287-442318	0	1.0
NZ_LR594690_2	2.5\|426127\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426127-426158	32	NZ_LR594660	Variovorax sp. PBL-H6 plasmid 2	358157-358188	0	1.0
NZ_LR594690_2	2.5\|426127\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426127-426158	32	NZ_LR594667	Variovorax sp. SRS16 plasmid 2	442214-442245	0	1.0
NZ_LR594690_2	2.5\|426127\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426127-426158	32	NZ_LR594690	Variovorax sp. WDL1 plasmid 2	426127-426158	0	1.0
NZ_LR594690_2	2.5\|426127\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426127-426158	32	NZ_LR594672	Variovorax sp. PBL-E5 plasmid 2	442348-442379	0	1.0
NZ_LR594690_2	2.6\|426188\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426188-426219	32	NZ_LR594660	Variovorax sp. PBL-H6 plasmid 2	358096-358127	0	1.0
NZ_LR594690_2	2.6\|426188\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426188-426219	32	NZ_LR594667	Variovorax sp. SRS16 plasmid 2	442275-442306	0	1.0
NZ_LR594690_2	2.6\|426188\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426188-426219	32	NZ_LR594690	Variovorax sp. WDL1 plasmid 2	426188-426219	0	1.0
NZ_LR594690_2	2.6\|426188\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426188-426219	32	NZ_LR594672	Variovorax sp. PBL-E5 plasmid 2	442409-442440	0	1.0
NZ_LR594690_2	2.7\|426249\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426249-426280	32	NZ_LR594660	Variovorax sp. PBL-H6 plasmid 2	358035-358066	0	1.0
NZ_LR594690_2	2.7\|426249\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426249-426280	32	NZ_LR594667	Variovorax sp. SRS16 plasmid 2	442336-442367	0	1.0
NZ_LR594690_2	2.7\|426249\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426249-426280	32	NZ_LR594690	Variovorax sp. WDL1 plasmid 2	426249-426280	0	1.0
NZ_LR594690_2	2.7\|426249\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426249-426280	32	NZ_LR594672	Variovorax sp. PBL-E5 plasmid 2	442470-442501	0	1.0
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_LR594660	Variovorax sp. PBL-H6 plasmid 2	357974-358005	0	1.0
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_LR594667	Variovorax sp. SRS16 plasmid 2	442397-442428	0	1.0
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_LR594690	Variovorax sp. WDL1 plasmid 2	426310-426341	0	1.0
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_LR594672	Variovorax sp. PBL-E5 plasmid 2	442531-442562	0	1.0
NZ_LR594690_2	2.9\|426371\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426371-426402	32	NZ_LR594660	Variovorax sp. PBL-H6 plasmid 2	357913-357944	0	1.0
NZ_LR594690_2	2.9\|426371\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426371-426402	32	NZ_LR594667	Variovorax sp. SRS16 plasmid 2	442458-442489	0	1.0
NZ_LR594690_2	2.9\|426371\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426371-426402	32	NZ_LR594690	Variovorax sp. WDL1 plasmid 2	426371-426402	0	1.0
NZ_LR594690_2	2.9\|426371\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426371-426402	32	NZ_LR594672	Variovorax sp. PBL-E5 plasmid 2	442592-442623	0	1.0
NZ_LR594690_2	2.10\|426432\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426432-426463	32	NZ_LR594660	Variovorax sp. PBL-H6 plasmid 2	357852-357883	0	1.0
NZ_LR594690_2	2.10\|426432\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426432-426463	32	NZ_LR594667	Variovorax sp. SRS16 plasmid 2	442519-442550	0	1.0
NZ_LR594690_2	2.10\|426432\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426432-426463	32	NZ_LR594690	Variovorax sp. WDL1 plasmid 2	426432-426463	0	1.0
NZ_LR594690_2	2.10\|426432\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426432-426463	32	NZ_LR594672	Variovorax sp. PBL-E5 plasmid 2	442653-442684	0	1.0
NZ_LR594690_2	2.11\|426493\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426493-426524	32	NZ_LR594660	Variovorax sp. PBL-H6 plasmid 2	357791-357822	0	1.0
NZ_LR594690_2	2.11\|426493\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426493-426524	32	NZ_LR594667	Variovorax sp. SRS16 plasmid 2	442580-442611	0	1.0
NZ_LR594690_2	2.11\|426493\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426493-426524	32	NZ_LR594690	Variovorax sp. WDL1 plasmid 2	426493-426524	0	1.0
NZ_LR594690_2	2.11\|426493\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426493-426524	32	NZ_LR594672	Variovorax sp. PBL-E5 plasmid 2	442714-442745	0	1.0
NZ_LR594690_2	2.12\|426554\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426554-426585	32	NZ_LR594660	Variovorax sp. PBL-H6 plasmid 2	357730-357761	0	1.0
NZ_LR594690_2	2.12\|426554\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426554-426585	32	NZ_LR594667	Variovorax sp. SRS16 plasmid 2	442641-442672	0	1.0
NZ_LR594690_2	2.12\|426554\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426554-426585	32	NZ_LR594690	Variovorax sp. WDL1 plasmid 2	426554-426585	0	1.0
NZ_LR594690_2	2.12\|426554\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426554-426585	32	NZ_LR594672	Variovorax sp. PBL-E5 plasmid 2	442775-442806	0	1.0
NZ_LR594690_2	2.13\|426615\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426615-426646	32	NZ_LR594660	Variovorax sp. PBL-H6 plasmid 2	357669-357700	0	1.0
NZ_LR594690_2	2.13\|426615\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426615-426646	32	NZ_LR594667	Variovorax sp. SRS16 plasmid 2	442702-442733	0	1.0
NZ_LR594690_2	2.13\|426615\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426615-426646	32	NZ_LR594690	Variovorax sp. WDL1 plasmid 2	426615-426646	0	1.0
NZ_LR594690_2	2.13\|426615\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426615-426646	32	NZ_LR594672	Variovorax sp. PBL-E5 plasmid 2	442836-442867	0	1.0
NZ_LR594690_2	2.14\|426676\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426676-426707	32	NZ_LR594660	Variovorax sp. PBL-H6 plasmid 2	357608-357639	0	1.0
NZ_LR594690_2	2.14\|426676\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426676-426707	32	NZ_LR594667	Variovorax sp. SRS16 plasmid 2	442763-442794	0	1.0
NZ_LR594690_2	2.14\|426676\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426676-426707	32	NZ_LR594690	Variovorax sp. WDL1 plasmid 2	426676-426707	0	1.0
NZ_LR594690_2	2.14\|426676\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426676-426707	32	NZ_LR594672	Variovorax sp. PBL-E5 plasmid 2	442897-442928	0	1.0
NZ_LR594690_2	2.15\|426737\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426737-426768	32	NZ_LR594660	Variovorax sp. PBL-H6 plasmid 2	357547-357578	0	1.0
NZ_LR594690_2	2.15\|426737\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426737-426768	32	NZ_LR594667	Variovorax sp. SRS16 plasmid 2	442824-442855	0	1.0
NZ_LR594690_2	2.15\|426737\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426737-426768	32	NZ_LR594690	Variovorax sp. WDL1 plasmid 2	426737-426768	0	1.0
NZ_LR594690_2	2.15\|426737\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426737-426768	32	NZ_LR594672	Variovorax sp. PBL-E5 plasmid 2	442958-442989	0	1.0
NZ_LR594690_3	3.1\|428160\|39\|NZ_LR594690\|CRT	428160-428198	39	NZ_LR594660	Variovorax sp. PBL-H6 plasmid 2	356117-356155	0	1.0
NZ_LR594690_3	3.1\|428160\|39\|NZ_LR594690\|CRT	428160-428198	39	NZ_LR594667	Variovorax sp. SRS16 plasmid 2	444247-444285	0	1.0
NZ_LR594690_3	3.1\|428160\|39\|NZ_LR594690\|CRT	428160-428198	39	NZ_LR594690	Variovorax sp. WDL1 plasmid 2	428160-428198	0	1.0
NZ_LR594690_3	3.1\|428160\|39\|NZ_LR594690\|CRT	428160-428198	39	NZ_LR594672	Variovorax sp. PBL-E5 plasmid 2	444381-444419	0	1.0
NZ_LR594690_3	3.2\|428221\|37\|NZ_LR594690\|CRT	428221-428257	37	NZ_LR594660	Variovorax sp. PBL-H6 plasmid 2	356058-356094	0	1.0
NZ_LR594690_3	3.2\|428221\|37\|NZ_LR594690\|CRT	428221-428257	37	NZ_LR594667	Variovorax sp. SRS16 plasmid 2	444308-444344	0	1.0
NZ_LR594690_3	3.2\|428221\|37\|NZ_LR594690\|CRT	428221-428257	37	NZ_LR594690	Variovorax sp. WDL1 plasmid 2	428221-428257	0	1.0
NZ_LR594690_3	3.2\|428221\|37\|NZ_LR594690\|CRT	428221-428257	37	NZ_LR594672	Variovorax sp. PBL-E5 plasmid 2	444442-444478	0	1.0
NZ_LR594690_3	3.3\|428280\|40\|NZ_LR594690\|CRT	428280-428319	40	NZ_LR594660	Variovorax sp. PBL-H6 plasmid 2	355996-356035	0	1.0
NZ_LR594690_3	3.3\|428280\|40\|NZ_LR594690\|CRT	428280-428319	40	NZ_LR594667	Variovorax sp. SRS16 plasmid 2	444367-444406	0	1.0
NZ_LR594690_3	3.3\|428280\|40\|NZ_LR594690\|CRT	428280-428319	40	NZ_LR594690	Variovorax sp. WDL1 plasmid 2	428280-428319	0	1.0
NZ_LR594690_3	3.3\|428280\|40\|NZ_LR594690\|CRT	428280-428319	40	NZ_LR594672	Variovorax sp. PBL-E5 plasmid 2	444501-444540	0	1.0
NZ_LR594690_3	3.4\|428342\|39\|NZ_LR594690\|CRT	428342-428380	39	NZ_LR594660	Variovorax sp. PBL-H6 plasmid 2	355935-355973	0	1.0
NZ_LR594690_3	3.4\|428342\|39\|NZ_LR594690\|CRT	428342-428380	39	NZ_LR594667	Variovorax sp. SRS16 plasmid 2	444429-444467	0	1.0
NZ_LR594690_3	3.4\|428342\|39\|NZ_LR594690\|CRT	428342-428380	39	NZ_LR594690	Variovorax sp. WDL1 plasmid 2	428342-428380	0	1.0
NZ_LR594690_3	3.4\|428342\|39\|NZ_LR594690\|CRT	428342-428380	39	NZ_LR594672	Variovorax sp. PBL-E5 plasmid 2	444563-444601	0	1.0
NZ_LR594690_3	3.5\|428403\|39\|NZ_LR594690\|CRT	428403-428441	39	NZ_LR594667	Variovorax sp. SRS16 plasmid 2	444490-444528	0	1.0
NZ_LR594690_3	3.5\|428403\|39\|NZ_LR594690\|CRT	428403-428441	39	NZ_LR594690	Variovorax sp. WDL1 plasmid 2	428403-428441	0	1.0
NZ_LR594690_3	3.5\|428403\|39\|NZ_LR594690\|CRT	428403-428441	39	NZ_LR594672	Variovorax sp. PBL-E5 plasmid 2	444624-444662	0	1.0
NZ_LR594690_3	3.5\|428403\|39\|NZ_LR594690\|CRT	428403-428441	39	NZ_LR594660	Variovorax sp. PBL-H6 plasmid 2	355874-355912	0	1.0
NZ_LR594690_3	3.6\|428464\|39\|NZ_LR594690\|CRT	428464-428502	39	NZ_LR594667	Variovorax sp. SRS16 plasmid 2	444551-444589	0	1.0
NZ_LR594690_3	3.6\|428464\|39\|NZ_LR594690\|CRT	428464-428502	39	NZ_LR594690	Variovorax sp. WDL1 plasmid 2	428464-428502	0	1.0
NZ_LR594690_3	3.6\|428464\|39\|NZ_LR594690\|CRT	428464-428502	39	NZ_LR594672	Variovorax sp. PBL-E5 plasmid 2	444685-444723	0	1.0
NZ_LR594690_3	3.6\|428464\|39\|NZ_LR594690\|CRT	428464-428502	39	NZ_LR594660	Variovorax sp. PBL-H6 plasmid 2	355813-355851	0	1.0
NZ_LR594690_3	3.7\|428525\|38\|NZ_LR594690\|CRT	428525-428562	38	NZ_LR594660	Variovorax sp. PBL-H6 plasmid 2	355753-355790	0	1.0
NZ_LR594690_3	3.7\|428525\|38\|NZ_LR594690\|CRT	428525-428562	38	NZ_LR594667	Variovorax sp. SRS16 plasmid 2	444612-444649	0	1.0
NZ_LR594690_3	3.7\|428525\|38\|NZ_LR594690\|CRT	428525-428562	38	NZ_LR594690	Variovorax sp. WDL1 plasmid 2	428525-428562	0	1.0
NZ_LR594690_3	3.7\|428525\|38\|NZ_LR594690\|CRT	428525-428562	38	NZ_LR594672	Variovorax sp. PBL-E5 plasmid 2	444746-444783	0	1.0
NZ_LR594690_3	3.8\|428585\|39\|NZ_LR594690\|CRT	428585-428623	39	NZ_LR594660	Variovorax sp. PBL-H6 plasmid 2	355692-355730	0	1.0
NZ_LR594690_3	3.8\|428585\|39\|NZ_LR594690\|CRT	428585-428623	39	NZ_LR594667	Variovorax sp. SRS16 plasmid 2	444672-444710	0	1.0
NZ_LR594690_3	3.8\|428585\|39\|NZ_LR594690\|CRT	428585-428623	39	NZ_LR594690	Variovorax sp. WDL1 plasmid 2	428585-428623	0	1.0
NZ_LR594690_3	3.8\|428585\|39\|NZ_LR594690\|CRT	428585-428623	39	NZ_LR594672	Variovorax sp. PBL-E5 plasmid 2	444806-444844	0	1.0
NZ_LR594690_3	3.9\|428646\|39\|NZ_LR594690\|CRT	428646-428684	39	NZ_LR594660	Variovorax sp. PBL-H6 plasmid 2	355631-355669	0	1.0
NZ_LR594690_3	3.9\|428646\|39\|NZ_LR594690\|CRT	428646-428684	39	NZ_LR594667	Variovorax sp. SRS16 plasmid 2	444733-444771	0	1.0
NZ_LR594690_3	3.9\|428646\|39\|NZ_LR594690\|CRT	428646-428684	39	NZ_LR594690	Variovorax sp. WDL1 plasmid 2	428646-428684	0	1.0
NZ_LR594690_3	3.9\|428646\|39\|NZ_LR594690\|CRT	428646-428684	39	NZ_LR594672	Variovorax sp. PBL-E5 plasmid 2	444867-444905	0	1.0
NZ_LR594690_3	3.10\|428707\|42\|NZ_LR594690\|CRT	428707-428748	42	NZ_LR594660	Variovorax sp. PBL-H6 plasmid 2	355565-355606	0	1.0
NZ_LR594690_3	3.10\|428707\|42\|NZ_LR594690\|CRT	428707-428748	42	NZ_LR594667	Variovorax sp. SRS16 plasmid 2	444796-444837	0	1.0
NZ_LR594690_3	3.10\|428707\|42\|NZ_LR594690\|CRT	428707-428748	42	NZ_LR594690	Variovorax sp. WDL1 plasmid 2	428707-428748	0	1.0
NZ_LR594690_3	3.10\|428707\|42\|NZ_LR594690\|CRT	428707-428748	42	NZ_LR594672	Variovorax sp. PBL-E5 plasmid 2	444930-444971	0	1.0
NZ_LR594690_3	3.11\|428771\|37\|NZ_LR594690\|CRT	428771-428807	37	NZ_LR594660	Variovorax sp. PBL-H6 plasmid 2	355506-355542	0	1.0
NZ_LR594690_3	3.11\|428771\|37\|NZ_LR594690\|CRT	428771-428807	37	NZ_LR594667	Variovorax sp. SRS16 plasmid 2	444860-444896	0	1.0
NZ_LR594690_3	3.11\|428771\|37\|NZ_LR594690\|CRT	428771-428807	37	NZ_LR594690	Variovorax sp. WDL1 plasmid 2	428771-428807	0	1.0
NZ_LR594690_3	3.11\|428771\|37\|NZ_LR594690\|CRT	428771-428807	37	NZ_LR594672	Variovorax sp. PBL-E5 plasmid 2	444994-445030	0	1.0
NZ_LR594690_3	3.12\|428830\|39\|NZ_LR594690\|CRT	428830-428868	39	NZ_LR594660	Variovorax sp. PBL-H6 plasmid 2	355445-355483	0	1.0
NZ_LR594690_3	3.12\|428830\|39\|NZ_LR594690\|CRT	428830-428868	39	NZ_LR594667	Variovorax sp. SRS16 plasmid 2	444919-444957	0	1.0
NZ_LR594690_3	3.12\|428830\|39\|NZ_LR594690\|CRT	428830-428868	39	NZ_LR594690	Variovorax sp. WDL1 plasmid 2	428830-428868	0	1.0
NZ_LR594690_3	3.12\|428830\|39\|NZ_LR594690\|CRT	428830-428868	39	NZ_LR594672	Variovorax sp. PBL-E5 plasmid 2	445053-445091	0	1.0
NZ_LR594690_3	3.13\|428891\|38\|NZ_LR594690\|CRT	428891-428928	38	NZ_LR594660	Variovorax sp. PBL-H6 plasmid 2	355385-355422	0	1.0
NZ_LR594690_3	3.13\|428891\|38\|NZ_LR594690\|CRT	428891-428928	38	NZ_LR594667	Variovorax sp. SRS16 plasmid 2	444980-445017	0	1.0
NZ_LR594690_3	3.13\|428891\|38\|NZ_LR594690\|CRT	428891-428928	38	NZ_LR594690	Variovorax sp. WDL1 plasmid 2	428891-428928	0	1.0
NZ_LR594690_3	3.13\|428891\|38\|NZ_LR594690\|CRT	428891-428928	38	NZ_LR594672	Variovorax sp. PBL-E5 plasmid 2	445114-445151	0	1.0
NZ_LR594690_4	4.1\|676187\|20\|NZ_LR594690\|CRISPRCasFinder	676187-676206	20	NZ_LR594660	Variovorax sp. PBL-H6 plasmid 2	138619-138638	0	1.0
NZ_LR594690_4	4.1\|676187\|20\|NZ_LR594690\|CRISPRCasFinder	676187-676206	20	NZ_LR594667	Variovorax sp. SRS16 plasmid 2	661764-661783	0	1.0
NZ_LR594690_4	4.1\|676187\|20\|NZ_LR594690\|CRISPRCasFinder	676187-676206	20	NZ_LR594690	Variovorax sp. WDL1 plasmid 2	676187-676206	0	1.0
NZ_LR594690_4	4.1\|676187\|20\|NZ_LR594690\|CRISPRCasFinder	676187-676206	20	NZ_LR594672	Variovorax sp. PBL-E5 plasmid 2	661898-661917	0	1.0
NZ_LR594690_4	4.2\|676230\|32\|NZ_LR594690\|CRISPRCasFinder	676230-676261	32	NZ_LR594660	Variovorax sp. PBL-H6 plasmid 2	138564-138595	0	1.0
NZ_LR594690_4	4.2\|676230\|32\|NZ_LR594690\|CRISPRCasFinder	676230-676261	32	NZ_LR594667	Variovorax sp. SRS16 plasmid 2	661807-661838	0	1.0
NZ_LR594690_4	4.2\|676230\|32\|NZ_LR594690\|CRISPRCasFinder	676230-676261	32	NZ_LR594690	Variovorax sp. WDL1 plasmid 2	676230-676261	0	1.0
NZ_LR594690_4	4.2\|676230\|32\|NZ_LR594690\|CRISPRCasFinder	676230-676261	32	NZ_LR594672	Variovorax sp. PBL-E5 plasmid 2	661941-661972	0	1.0
NZ_LR594690_4	4.3\|676285\|35\|NZ_LR594690\|CRISPRCasFinder	676285-676319	35	NZ_LR594660	Variovorax sp. PBL-H6 plasmid 2	138506-138540	0	1.0
NZ_LR594690_4	4.3\|676285\|35\|NZ_LR594690\|CRISPRCasFinder	676285-676319	35	NZ_LR594667	Variovorax sp. SRS16 plasmid 2	661862-661896	0	1.0
NZ_LR594690_4	4.3\|676285\|35\|NZ_LR594690\|CRISPRCasFinder	676285-676319	35	NZ_LR594690	Variovorax sp. WDL1 plasmid 2	676285-676319	0	1.0
NZ_LR594690_4	4.3\|676285\|35\|NZ_LR594690\|CRISPRCasFinder	676285-676319	35	NZ_LR594672	Variovorax sp. PBL-E5 plasmid 2	661996-662030	0	1.0
NZ_LR594690_5	5.1\|676376\|39\|NZ_LR594690\|PILER-CR	676376-676414	39	NZ_LR594660	Variovorax sp. PBL-H6 plasmid 2	138421-138459	0	1.0
NZ_LR594690_5	5.1\|676376\|39\|NZ_LR594690\|PILER-CR	676376-676414	39	NZ_LR594667	Variovorax sp. SRS16 plasmid 2	661943-661981	0	1.0
NZ_LR594690_5	5.1\|676376\|39\|NZ_LR594690\|PILER-CR	676376-676414	39	NZ_LR594690	Variovorax sp. WDL1 plasmid 2	676367-676405	0	1.0
NZ_LR594690_5	5.1\|676376\|39\|NZ_LR594690\|PILER-CR	676376-676414	39	NZ_LR594672	Variovorax sp. PBL-E5 plasmid 2	662077-662115	0	1.0
NZ_LR594690_5	5.2\|676439\|53\|NZ_LR594690\|PILER-CR	676439-676491	53	NZ_LR594660	Variovorax sp. PBL-H6 plasmid 2	138344-138396	0	1.0
NZ_LR594690_5	5.2\|676439\|53\|NZ_LR594690\|PILER-CR	676439-676491	53	NZ_LR594667	Variovorax sp. SRS16 plasmid 2	662006-662058	0	1.0
NZ_LR594690_5	5.2\|676439\|53\|NZ_LR594690\|PILER-CR	676439-676491	53	NZ_LR594690	Variovorax sp. WDL1 plasmid 2	676430-676482	0	1.0
NZ_LR594690_5	5.2\|676439\|53\|NZ_LR594690\|PILER-CR	676439-676491	53	NZ_LR594672	Variovorax sp. PBL-E5 plasmid 2	662140-662192	0	1.0
NZ_LR594690_1	1.1\|2400\|49\|NZ_LR594690\|CRISPRCasFinder	2400-2448	49	NZ_LR594660	Variovorax sp. PBL-H6 plasmid 2	835741-835789	1	0.98
NZ_LR594690_1	1.1\|2400\|49\|NZ_LR594690\|CRISPRCasFinder	2400-2448	49	NZ_LR594667	Variovorax sp. SRS16 plasmid 2	2400-2448	1	0.98
NZ_LR594690_1	1.1\|2400\|49\|NZ_LR594690\|CRISPRCasFinder	2400-2448	49	NZ_LR594672	Variovorax sp. PBL-E5 plasmid 2	2400-2448	1	0.98
NZ_LR594690_2	2.12\|426554\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426554-426585	32	NZ_CP046256	Sphingobium sp. CAP-1 plasmid p3, complete sequence	116333-116364	6	0.812
NZ_LR594690_2	2.12\|426554\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426554-426585	32	NZ_CP022748	Sphingobium hydrophobicum strain C1 plasmid p2, complete sequence	114465-114496	6	0.812
NZ_LR594690_2	2.12\|426554\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426554-426585	32	NC_009507	Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence	66391-66422	6	0.812
NZ_LR594690_2	2.6\|426188\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426188-426219	32	CP006583	Mesorhizobium huakuii 7653R plasmid pMHb, complete sequence	235841-235872	7	0.781
NZ_LR594690_2	2.6\|426188\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426188-426219	32	CP006582	Mesorhizobium huakuii 7653R plasmid pMHa, complete sequence	125416-125447	7	0.781
NZ_LR594690_2	2.12\|426554\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426554-426585	32	MK937601	Gordonia phage Charming, complete genome	15929-15960	7	0.781
NZ_LR594690_2	2.12\|426554\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426554-426585	32	MH976519	Gordonia phage Tangent, complete genome	15929-15960	7	0.781
NZ_LR594690_2	2.12\|426554\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426554-426585	32	MH976510	Gordonia phage Fosterous, complete genome	16818-16849	7	0.781
NZ_LR594690_2	2.12\|426554\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426554-426585	32	MH153809	Gordonia phage Sitar, complete genome	18113-18144	7	0.781
NZ_LR594690_2	2.12\|426554\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426554-426585	32	MH976518	Gordonia phage Stultus, complete genome	16724-16755	7	0.781
NZ_LR594690_2	2.12\|426554\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426554-426585	32	MH479924	Gordonia phage Rofo, complete genome	16928-16959	7	0.781
NZ_LR594690_2	2.12\|426554\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426554-426585	32	MK937594	Gordonia phage Galadriel, complete genome	16668-16699	7	0.781
NZ_LR594690_2	2.12\|426554\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426554-426585	32	MN329673	Gordonia phage Jabberwocky, complete genome	16789-16820	7	0.781
NZ_LR594690_2	2.12\|426554\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426554-426585	32	MT723934	Gordonia phage Love, complete genome	16988-17019	7	0.781
NZ_LR594690_2	2.12\|426554\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426554-426585	32	MH651166	Gordonia phage Angelicage, complete genome	17563-17594	7	0.781
NZ_LR594690_2	2.12\|426554\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426554-426585	32	MT639640	Gordonia phage Paries, complete genome	16676-16707	7	0.781
NZ_LR594690_2	2.12\|426554\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426554-426585	32	MK977702	Gordonia terrae phage McKinley, complete genome	17014-17045	7	0.781
NZ_LR594690_2	2.12\|426554\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426554-426585	32	NC_042108	Gordonia phage Brandonk123, complete genome	16619-16650	7	0.781
NZ_LR594690_2	2.12\|426554\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426554-426585	32	MH976514	Gordonia phage Nordenberg, complete genome	15308-15339	7	0.781
NZ_LR594690_2	2.12\|426554\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426554-426585	32	MH976508	Gordonia phage Bibwit, complete genome	17305-17336	7	0.781
NZ_LR594690_2	2.12\|426554\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426554-426585	32	MH976506	Gordonia phage Affeca, complete genome	17140-17171	7	0.781
NZ_LR594690_2	2.12\|426554\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426554-426585	32	MN329677	Gordonia phage Keitabear, complete genome	19010-19041	7	0.781
NZ_LR594690_2	2.12\|426554\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426554-426585	32	NC_042045	Gordonia phage Lennon, complete genome	18113-18144	7	0.781
NZ_LR594690_2	2.12\|426554\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426554-426585	32	MH976507	Gordonia phage Ailee, complete genome	17054-17085	7	0.781
NZ_LR594690_2	2.12\|426554\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426554-426585	32	MT498035	Gordonia Phage Barsten, complete genome	17073-17104	7	0.781
NZ_LR594690_2	2.12\|426554\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426554-426585	32	KR053200	Gordonia phage GTE6, complete genome	2759-2790	7	0.781
NZ_LR594690_2	2.12\|426554\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426554-426585	32	MH976512	Gordonia phage Geodirt, complete genome	16885-16916	7	0.781
NZ_LR594690_2	2.12\|426554\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426554-426585	32	NC_031239	Gordonia phage Vivi2, complete genome	17091-17122	7	0.781
NZ_LR594690_2	2.3\|426005\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426005-426036	32	NZ_CP047178	Rathayibacter sp. VKM Ac-2759 plasmid unnamed2, complete sequence	25619-25650	8	0.75
NZ_LR594690_2	2.4\|426066\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426066-426097	32	NZ_CP032828	Sphingomonas sp. YZ-8 plasmid unnamed1, complete sequence	186617-186648	8	0.75
NZ_LR594690_2	2.4\|426066\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426066-426097	32	MH067967	Arthrobacter sp. strain ANT_H19B plasmid pA19BH1, complete sequence	19855-19886	8	0.75
NZ_LR594690_2	2.6\|426188\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426188-426219	32	NZ_CP022195	Yangia pacifica strain YSBP01 plasmid unnamed5, complete sequence	44071-44102	8	0.75
NZ_LR594690_2	2.6\|426188\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426188-426219	32	NC_007801	Jannaschia sp. CCS1 plasmid p1, complete sequence	65992-66023	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP016613	Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence	358405-358436	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP022775	Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence	278053-278084	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP021449	Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence	1804682-1804713	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP026091	Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence	290954-290985	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	CP023013	Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence	267557-267588	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NC_014310	Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence	271597-271628	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP022762	Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence	282244-282275	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP049790	Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence	287948-287979	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP049794	Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence	363700-363731	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP049788	Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence	1669973-1670004	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP022766	Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence	270678-270709	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP039340	Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence	647842-647873	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP021763	Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence	332049-332080	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP026093	Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence	290921-290952	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP021767	Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence	498156-498187	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP015116	Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence	424114-424145	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP016555	Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence	1998514-1998545	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP012940	Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence	1711588-1711619	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP012944	Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence	1728293-1728324	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP012688	Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence	498121-498152	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP049792	Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence	145176-145207	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP052069	Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence	271623-271654	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP016915	Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence	882761-882792	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP016905	Ralstonia solanacearum strain KACC 10709 plasmid unnamed1	1260699-1260730	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP025986	Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence	41625-41656	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP022769	Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence	271937-271968	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP023017	Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence	265636-265667	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP015851	Ralstonia solanacearum strain YC40-M plasmid, complete sequence	119779-119810	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP022773	Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence	278972-279003	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP022783	Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence	268719-268750	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP022791	Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence	160451-160482	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP014703	Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence	282244-282275	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP022760	Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence	275465-275496	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP022789	Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence	275454-275485	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP022795	Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence	267802-267833	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP052071	Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence	284746-284777	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NC_017575	Ralstonia solanacearum Po82 megaplasmid, complete sequence	290743-290774	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP022771	Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence	282256-282287	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP022777	Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence	282277-282308	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP022799	Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence	282243-282274	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP022482	Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence	812202-812233	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP009763	Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence	265001-265032	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	CP023015	Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence	268966-268997	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP022779	Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence	271954-271985	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP052075	Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence	284746-284777	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP052085	Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence	286413-286444	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP052095	Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence	270706-270737	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP052105	Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence	284745-284776	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP026308	Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence	290729-290760	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP052077	Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence	263572-263603	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP052087	Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence	286413-286444	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP052097	Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence	270706-270737	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	CP047139	Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence	497914-497945	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP051295	Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence	1692542-1692573	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP052115	Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence	284746-284777	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP052127	Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence	286413-286444	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	CP047137	Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence	475017-475048	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP022764	Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence	278073-278104	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP052079	Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence	263575-263606	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP052089	Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence	286413-286444	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP052093	Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence	270706-270737	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP052101	Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence	270706-270737	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP052099	Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence	270706-270737	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP052107	Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence	284746-284777	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP022781	Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence	1825927-1825958	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP052117	Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence	284746-284777	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP052125	Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence	263575-263606	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP022793	Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence	278955-278986	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP022797	Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence	278072-278103	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP022785	Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence	278926-278957	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP022787	Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence	275557-275588	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP022756	Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence	273684-273715	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP052129	Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence	269217-269248	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP052121	Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence	284746-284777	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP052123	Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence	263575-263606	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP052131	Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence	286413-286444	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	CP011998	Ralstonia solanacearum strain YC45 plasmid, complete sequence	389310-389341	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP052073	Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence	284740-284771	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP052081	Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence	263575-263606	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP052083	Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence	263575-263606	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP052109	Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence	284746-284777	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP052091	Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence	270706-270737	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP052111	Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence	1807974-1808005	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP052103	Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence	284746-284777	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP052119	Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence	284746-284777	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP052113	Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence	1807974-1808005	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP022758	Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence	278068-278099	8	0.75
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP029358	Azospirillum sp. CFH 70021 plasmid unnamed3	58727-58758	8	0.75
NZ_LR594690_2	2.10\|426432\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426432-426463	32	NC_011879	Pseudarthrobacter chlorophenolicus A6 plasmid pACHL01, complete sequence	251020-251051	8	0.75
NZ_LR594690_2	2.12\|426554\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426554-426585	32	CP040467	Streptomyces albidoflavus strain UYFA156 plasmid unnamed, complete sequence	174395-174426	8	0.75
NZ_LR594690_2	2.1\|425883\|32\|NZ_LR594690\|CRISPRCasFinder,CRT	425883-425914	32	NZ_CP043762	Paenibacillus sp. 37 plasmid pART37, complete sequence	422166-422197	9	0.719
NZ_LR594690_2	2.2\|425944\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	425944-425975	32	NZ_CP032695	Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence	2509979-2510010	9	0.719
NZ_LR594690_2	2.4\|426066\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426066-426097	32	NZ_CP045003	Pseudomonas aeruginosa strain PAG5 plasmid pPAG5, complete sequence	29368-29399	9	0.719
NZ_LR594690_2	2.4\|426066\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426066-426097	32	NZ_CP032520	Cupriavidus oxalaticus strain T2 plasmid unnamed1, complete sequence	464253-464284	9	0.719
NZ_LR594690_2	2.4\|426066\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426066-426097	32	NZ_CP030074	Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence	923923-923954	9	0.719
NZ_LR594690_2	2.6\|426188\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426188-426219	32	NC_009669	Ochrobactrum anthropi ATCC 49188 plasmid pOANT01, complete sequence	54276-54307	9	0.719
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP036456	Streptomonospora sp. M2 plasmid phiM2, complete sequence	24723-24754	9	0.719
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP017750	Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence	246751-246782	9	0.719
NZ_LR594690_2	2.12\|426554\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426554-426585	32	NZ_CP009292	Novosphingobium pentaromativorans US6-1 plasmid pLA3, complete sequence	625019-625050	9	0.719
NZ_LR594690_2	2.15\|426737\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426737-426768	32	NZ_CP024314	Rhizobium sp. NXC24 plasmid pRspNXC24c, complete sequence	986435-986466	9	0.719
NZ_LR594690_2	2.1\|425883\|32\|NZ_LR594690\|CRISPRCasFinder,CRT	425883-425914	32	NZ_LR594691	Variovorax sp. WDL1 plasmid 3	470532-470563	10	0.688
NZ_LR594690_2	2.2\|425944\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	425944-425975	32	CP027479	Pseudomonas koreensis strain P19E3 plasmid p2, complete sequence	243723-243754	10	0.688
NZ_LR594690_2	2.4\|426066\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426066-426097	32	CP054917	Streptomyces sp. NA02950 plasmid unnamed, complete sequence	118396-118427	10	0.688
NZ_LR594690_2	2.5\|426127\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426127-426158	32	NZ_CP022992	Paraburkholderia aromaticivorans strain BN5 plasmid pBN2, complete sequence	136682-136713	10	0.688
NZ_LR594690_2	2.6\|426188\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426188-426219	32	NC_015727	Cupriavidus necator N-1 plasmid pBB1, complete sequence	803467-803498	10	0.688
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP039340	Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence	1714727-1714758	10	0.688
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NC_014309	Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome	288190-288221	10	0.688
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_AP018720	Sterolibacteriaceae bacterium J5B plasmid pSTJ2, complete sequence	9744-9775	10	0.688
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP021765	Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence	332108-332139	10	0.688
NZ_LR594690_2	2.10\|426432\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426432-426463	32	NC_009621	Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence	522399-522430	10	0.688
NZ_LR594690_2	2.12\|426554\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426554-426585	32	NZ_CP027859	Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence	971025-971056	10	0.688
NZ_LR594690_2	2.12\|426554\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426554-426585	32	NZ_CP032054	Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence	572785-572816	10	0.688
NZ_LR594690_2	2.12\|426554\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426554-426585	32	NZ_CP016560	Streptomyces clavuligerus strain F613-1 plasmid pSCL4, complete sequence	230041-230072	10	0.688
NZ_LR594690_2	2.8\|426310\|32\|NZ_LR594690\|CRISPRCasFinder,CRT,PILER-CR	426310-426341	32	NZ_CP031358	Erythrobacter aureus strain YH-07 plasmid unnamed, complete sequence	48745-48776	11	0.656

1. spacer 1.1|2400|49|NZ_LR594690|CRISPRCasFinder matches to NZ_LR594690 (Variovorax sp. WDL1 plasmid 2) position: , mismatch: 0, identity: 1.0

cttccagcagcagcgtgacggcgtcttgtccctagtagggacaaactaa	CRISPR spacer
cttccagcagcagcgtgacggcgtcttgtccctagtagggacaaactaa	Protospacer
*************************************************

2. spacer 2.1|425883|32|NZ_LR594690|CRISPRCasFinder,CRT matches to NZ_LR594660 (Variovorax sp. PBL-H6 plasmid 2) position: , mismatch: 0, identity: 1.0

gtgctcattggcgtgaacttggccatcaaggg	CRISPR spacer
gtgctcattggcgtgaacttggccatcaaggg	Protospacer
********************************

3. spacer 2.1|425883|32|NZ_LR594690|CRISPRCasFinder,CRT matches to NZ_LR594667 (Variovorax sp. SRS16 plasmid 2) position: , mismatch: 0, identity: 1.0

gtgctcattggcgtgaacttggccatcaaggg	CRISPR spacer
gtgctcattggcgtgaacttggccatcaaggg	Protospacer
********************************

4. spacer 2.1|425883|32|NZ_LR594690|CRISPRCasFinder,CRT matches to NZ_LR594690 (Variovorax sp. WDL1 plasmid 2) position: , mismatch: 0, identity: 1.0

gtgctcattggcgtgaacttggccatcaaggg	CRISPR spacer
gtgctcattggcgtgaacttggccatcaaggg	Protospacer
********************************

5. spacer 2.1|425883|32|NZ_LR594690|CRISPRCasFinder,CRT matches to NZ_LR594672 (Variovorax sp. PBL-E5 plasmid 2) position: , mismatch: 0, identity: 1.0

gtgctcattggcgtgaacttggccatcaaggg	CRISPR spacer
gtgctcattggcgtgaacttggccatcaaggg	Protospacer
********************************

6. spacer 2.2|425944|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594660 (Variovorax sp. PBL-H6 plasmid 2) position: , mismatch: 0, identity: 1.0

ctcagcaaatgctcatcgcccgcagcccgtac	CRISPR spacer
ctcagcaaatgctcatcgcccgcagcccgtac	Protospacer
********************************

7. spacer 2.2|425944|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594667 (Variovorax sp. SRS16 plasmid 2) position: , mismatch: 0, identity: 1.0

ctcagcaaatgctcatcgcccgcagcccgtac	CRISPR spacer
ctcagcaaatgctcatcgcccgcagcccgtac	Protospacer
********************************

8. spacer 2.2|425944|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594690 (Variovorax sp. WDL1 plasmid 2) position: , mismatch: 0, identity: 1.0

ctcagcaaatgctcatcgcccgcagcccgtac	CRISPR spacer
ctcagcaaatgctcatcgcccgcagcccgtac	Protospacer
********************************

9. spacer 2.2|425944|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594672 (Variovorax sp. PBL-E5 plasmid 2) position: , mismatch: 0, identity: 1.0

ctcagcaaatgctcatcgcccgcagcccgtac	CRISPR spacer
ctcagcaaatgctcatcgcccgcagcccgtac	Protospacer
********************************

10. spacer 2.3|426005|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594660 (Variovorax sp. PBL-H6 plasmid 2) position: , mismatch: 0, identity: 1.0

acgcgtgagcaaatcgaggacgaccaatttca	CRISPR spacer
acgcgtgagcaaatcgaggacgaccaatttca	Protospacer
********************************

11. spacer 2.3|426005|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594667 (Variovorax sp. SRS16 plasmid 2) position: , mismatch: 0, identity: 1.0

acgcgtgagcaaatcgaggacgaccaatttca	CRISPR spacer
acgcgtgagcaaatcgaggacgaccaatttca	Protospacer
********************************

12. spacer 2.3|426005|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594690 (Variovorax sp. WDL1 plasmid 2) position: , mismatch: 0, identity: 1.0

acgcgtgagcaaatcgaggacgaccaatttca	CRISPR spacer
acgcgtgagcaaatcgaggacgaccaatttca	Protospacer
********************************

13. spacer 2.3|426005|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594672 (Variovorax sp. PBL-E5 plasmid 2) position: , mismatch: 0, identity: 1.0

acgcgtgagcaaatcgaggacgaccaatttca	CRISPR spacer
acgcgtgagcaaatcgaggacgaccaatttca	Protospacer
********************************

14. spacer 2.4|426066|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594660 (Variovorax sp. PBL-H6 plasmid 2) position: , mismatch: 0, identity: 1.0

gtgtccaccggcatcgaccacttcgaagaggg	CRISPR spacer
gtgtccaccggcatcgaccacttcgaagaggg	Protospacer
********************************

15. spacer 2.4|426066|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594667 (Variovorax sp. SRS16 plasmid 2) position: , mismatch: 0, identity: 1.0

gtgtccaccggcatcgaccacttcgaagaggg	CRISPR spacer
gtgtccaccggcatcgaccacttcgaagaggg	Protospacer
********************************

16. spacer 2.4|426066|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594690 (Variovorax sp. WDL1 plasmid 2) position: , mismatch: 0, identity: 1.0

gtgtccaccggcatcgaccacttcgaagaggg	CRISPR spacer
gtgtccaccggcatcgaccacttcgaagaggg	Protospacer
********************************

17. spacer 2.4|426066|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594672 (Variovorax sp. PBL-E5 plasmid 2) position: , mismatch: 0, identity: 1.0

gtgtccaccggcatcgaccacttcgaagaggg	CRISPR spacer
gtgtccaccggcatcgaccacttcgaagaggg	Protospacer
********************************

18. spacer 2.5|426127|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594660 (Variovorax sp. PBL-H6 plasmid 2) position: , mismatch: 0, identity: 1.0

tcaatgcagcgcgcttgccaggtgatagcgca	CRISPR spacer
tcaatgcagcgcgcttgccaggtgatagcgca	Protospacer
********************************

19. spacer 2.5|426127|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594667 (Variovorax sp. SRS16 plasmid 2) position: , mismatch: 0, identity: 1.0

tcaatgcagcgcgcttgccaggtgatagcgca	CRISPR spacer
tcaatgcagcgcgcttgccaggtgatagcgca	Protospacer
********************************

20. spacer 2.5|426127|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594690 (Variovorax sp. WDL1 plasmid 2) position: , mismatch: 0, identity: 1.0

tcaatgcagcgcgcttgccaggtgatagcgca	CRISPR spacer
tcaatgcagcgcgcttgccaggtgatagcgca	Protospacer
********************************

21. spacer 2.5|426127|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594672 (Variovorax sp. PBL-E5 plasmid 2) position: , mismatch: 0, identity: 1.0

tcaatgcagcgcgcttgccaggtgatagcgca	CRISPR spacer
tcaatgcagcgcgcttgccaggtgatagcgca	Protospacer
********************************

22. spacer 2.6|426188|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594660 (Variovorax sp. PBL-H6 plasmid 2) position: , mismatch: 0, identity: 1.0

ccctcggcgtcctcgaggccaatcaccagccg	CRISPR spacer
ccctcggcgtcctcgaggccaatcaccagccg	Protospacer
********************************

23. spacer 2.6|426188|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594667 (Variovorax sp. SRS16 plasmid 2) position: , mismatch: 0, identity: 1.0

ccctcggcgtcctcgaggccaatcaccagccg	CRISPR spacer
ccctcggcgtcctcgaggccaatcaccagccg	Protospacer
********************************

24. spacer 2.6|426188|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594690 (Variovorax sp. WDL1 plasmid 2) position: , mismatch: 0, identity: 1.0

ccctcggcgtcctcgaggccaatcaccagccg	CRISPR spacer
ccctcggcgtcctcgaggccaatcaccagccg	Protospacer
********************************

25. spacer 2.6|426188|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594672 (Variovorax sp. PBL-E5 plasmid 2) position: , mismatch: 0, identity: 1.0

ccctcggcgtcctcgaggccaatcaccagccg	CRISPR spacer
ccctcggcgtcctcgaggccaatcaccagccg	Protospacer
********************************

26. spacer 2.7|426249|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594660 (Variovorax sp. PBL-H6 plasmid 2) position: , mismatch: 0, identity: 1.0

gtctacggatgtctgggtggcttcctcgtcgg	CRISPR spacer
gtctacggatgtctgggtggcttcctcgtcgg	Protospacer
********************************

27. spacer 2.7|426249|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594667 (Variovorax sp. SRS16 plasmid 2) position: , mismatch: 0, identity: 1.0

gtctacggatgtctgggtggcttcctcgtcgg	CRISPR spacer
gtctacggatgtctgggtggcttcctcgtcgg	Protospacer
********************************

28. spacer 2.7|426249|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594690 (Variovorax sp. WDL1 plasmid 2) position: , mismatch: 0, identity: 1.0

gtctacggatgtctgggtggcttcctcgtcgg	CRISPR spacer
gtctacggatgtctgggtggcttcctcgtcgg	Protospacer
********************************

29. spacer 2.7|426249|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594672 (Variovorax sp. PBL-E5 plasmid 2) position: , mismatch: 0, identity: 1.0

gtctacggatgtctgggtggcttcctcgtcgg	CRISPR spacer
gtctacggatgtctgggtggcttcctcgtcgg	Protospacer
********************************

30. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594660 (Variovorax sp. PBL-H6 plasmid 2) position: , mismatch: 0, identity: 1.0

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ggctcctggatggcgatgctctcgatggtcga	Protospacer
********************************

31. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594667 (Variovorax sp. SRS16 plasmid 2) position: , mismatch: 0, identity: 1.0

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ggctcctggatggcgatgctctcgatggtcga	Protospacer
********************************

32. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594690 (Variovorax sp. WDL1 plasmid 2) position: , mismatch: 0, identity: 1.0

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ggctcctggatggcgatgctctcgatggtcga	Protospacer
********************************

33. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594672 (Variovorax sp. PBL-E5 plasmid 2) position: , mismatch: 0, identity: 1.0

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ggctcctggatggcgatgctctcgatggtcga	Protospacer
********************************

34. spacer 2.9|426371|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594660 (Variovorax sp. PBL-H6 plasmid 2) position: , mismatch: 0, identity: 1.0

gaagcccccttctttgcatgcaacaagcctcg	CRISPR spacer
gaagcccccttctttgcatgcaacaagcctcg	Protospacer
********************************

35. spacer 2.9|426371|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594667 (Variovorax sp. SRS16 plasmid 2) position: , mismatch: 0, identity: 1.0

gaagcccccttctttgcatgcaacaagcctcg	CRISPR spacer
gaagcccccttctttgcatgcaacaagcctcg	Protospacer
********************************

36. spacer 2.9|426371|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594690 (Variovorax sp. WDL1 plasmid 2) position: , mismatch: 0, identity: 1.0

gaagcccccttctttgcatgcaacaagcctcg	CRISPR spacer
gaagcccccttctttgcatgcaacaagcctcg	Protospacer
********************************

37. spacer 2.9|426371|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594672 (Variovorax sp. PBL-E5 plasmid 2) position: , mismatch: 0, identity: 1.0

gaagcccccttctttgcatgcaacaagcctcg	CRISPR spacer
gaagcccccttctttgcatgcaacaagcctcg	Protospacer
********************************

38. spacer 2.10|426432|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594660 (Variovorax sp. PBL-H6 plasmid 2) position: , mismatch: 0, identity: 1.0

aggggcacgatgtcgaacgcggtggacgccgg	CRISPR spacer
aggggcacgatgtcgaacgcggtggacgccgg	Protospacer
********************************

39. spacer 2.10|426432|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594667 (Variovorax sp. SRS16 plasmid 2) position: , mismatch: 0, identity: 1.0

aggggcacgatgtcgaacgcggtggacgccgg	CRISPR spacer
aggggcacgatgtcgaacgcggtggacgccgg	Protospacer
********************************

40. spacer 2.10|426432|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594690 (Variovorax sp. WDL1 plasmid 2) position: , mismatch: 0, identity: 1.0

aggggcacgatgtcgaacgcggtggacgccgg	CRISPR spacer
aggggcacgatgtcgaacgcggtggacgccgg	Protospacer
********************************

41. spacer 2.10|426432|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594672 (Variovorax sp. PBL-E5 plasmid 2) position: , mismatch: 0, identity: 1.0

aggggcacgatgtcgaacgcggtggacgccgg	CRISPR spacer
aggggcacgatgtcgaacgcggtggacgccgg	Protospacer
********************************

42. spacer 2.11|426493|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594660 (Variovorax sp. PBL-H6 plasmid 2) position: , mismatch: 0, identity: 1.0

tactcgacgtctcgagatggaagcaaagactg	CRISPR spacer
tactcgacgtctcgagatggaagcaaagactg	Protospacer
********************************

43. spacer 2.11|426493|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594667 (Variovorax sp. SRS16 plasmid 2) position: , mismatch: 0, identity: 1.0

tactcgacgtctcgagatggaagcaaagactg	CRISPR spacer
tactcgacgtctcgagatggaagcaaagactg	Protospacer
********************************

44. spacer 2.11|426493|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594690 (Variovorax sp. WDL1 plasmid 2) position: , mismatch: 0, identity: 1.0

tactcgacgtctcgagatggaagcaaagactg	CRISPR spacer
tactcgacgtctcgagatggaagcaaagactg	Protospacer
********************************

45. spacer 2.11|426493|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594672 (Variovorax sp. PBL-E5 plasmid 2) position: , mismatch: 0, identity: 1.0

tactcgacgtctcgagatggaagcaaagactg	CRISPR spacer
tactcgacgtctcgagatggaagcaaagactg	Protospacer
********************************

46. spacer 2.12|426554|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594660 (Variovorax sp. PBL-H6 plasmid 2) position: , mismatch: 0, identity: 1.0

agcagctgcgcggtacgcgcgccccagcacgg	CRISPR spacer
agcagctgcgcggtacgcgcgccccagcacgg	Protospacer
********************************

47. spacer 2.12|426554|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594667 (Variovorax sp. SRS16 plasmid 2) position: , mismatch: 0, identity: 1.0

agcagctgcgcggtacgcgcgccccagcacgg	CRISPR spacer
agcagctgcgcggtacgcgcgccccagcacgg	Protospacer
********************************

48. spacer 2.12|426554|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594690 (Variovorax sp. WDL1 plasmid 2) position: , mismatch: 0, identity: 1.0

agcagctgcgcggtacgcgcgccccagcacgg	CRISPR spacer
agcagctgcgcggtacgcgcgccccagcacgg	Protospacer
********************************

49. spacer 2.12|426554|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594672 (Variovorax sp. PBL-E5 plasmid 2) position: , mismatch: 0, identity: 1.0

agcagctgcgcggtacgcgcgccccagcacgg	CRISPR spacer
agcagctgcgcggtacgcgcgccccagcacgg	Protospacer
********************************

50. spacer 2.13|426615|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594660 (Variovorax sp. PBL-H6 plasmid 2) position: , mismatch: 0, identity: 1.0

gcgtgcggctcaccttggtgcgaacggattta	CRISPR spacer
gcgtgcggctcaccttggtgcgaacggattta	Protospacer
********************************

51. spacer 2.13|426615|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594667 (Variovorax sp. SRS16 plasmid 2) position: , mismatch: 0, identity: 1.0

gcgtgcggctcaccttggtgcgaacggattta	CRISPR spacer
gcgtgcggctcaccttggtgcgaacggattta	Protospacer
********************************

52. spacer 2.13|426615|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594690 (Variovorax sp. WDL1 plasmid 2) position: , mismatch: 0, identity: 1.0

gcgtgcggctcaccttggtgcgaacggattta	CRISPR spacer
gcgtgcggctcaccttggtgcgaacggattta	Protospacer
********************************

53. spacer 2.13|426615|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594672 (Variovorax sp. PBL-E5 plasmid 2) position: , mismatch: 0, identity: 1.0

gcgtgcggctcaccttggtgcgaacggattta	CRISPR spacer
gcgtgcggctcaccttggtgcgaacggattta	Protospacer
********************************

54. spacer 2.14|426676|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594660 (Variovorax sp. PBL-H6 plasmid 2) position: , mismatch: 0, identity: 1.0

gacgttgcagcggccgtcagcgccccacaaga	CRISPR spacer
gacgttgcagcggccgtcagcgccccacaaga	Protospacer
********************************

55. spacer 2.14|426676|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594667 (Variovorax sp. SRS16 plasmid 2) position: , mismatch: 0, identity: 1.0

gacgttgcagcggccgtcagcgccccacaaga	CRISPR spacer
gacgttgcagcggccgtcagcgccccacaaga	Protospacer
********************************

56. spacer 2.14|426676|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594690 (Variovorax sp. WDL1 plasmid 2) position: , mismatch: 0, identity: 1.0

gacgttgcagcggccgtcagcgccccacaaga	CRISPR spacer
gacgttgcagcggccgtcagcgccccacaaga	Protospacer
********************************

57. spacer 2.14|426676|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594672 (Variovorax sp. PBL-E5 plasmid 2) position: , mismatch: 0, identity: 1.0

gacgttgcagcggccgtcagcgccccacaaga	CRISPR spacer
gacgttgcagcggccgtcagcgccccacaaga	Protospacer
********************************

58. spacer 2.15|426737|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594660 (Variovorax sp. PBL-H6 plasmid 2) position: , mismatch: 0, identity: 1.0

gcgcacgcagcacgccaaagcctgacgctgcg	CRISPR spacer
gcgcacgcagcacgccaaagcctgacgctgcg	Protospacer
********************************

59. spacer 2.15|426737|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594667 (Variovorax sp. SRS16 plasmid 2) position: , mismatch: 0, identity: 1.0

gcgcacgcagcacgccaaagcctgacgctgcg	CRISPR spacer
gcgcacgcagcacgccaaagcctgacgctgcg	Protospacer
********************************

60. spacer 2.15|426737|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594690 (Variovorax sp. WDL1 plasmid 2) position: , mismatch: 0, identity: 1.0

gcgcacgcagcacgccaaagcctgacgctgcg	CRISPR spacer
gcgcacgcagcacgccaaagcctgacgctgcg	Protospacer
********************************

61. spacer 2.15|426737|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR594672 (Variovorax sp. PBL-E5 plasmid 2) position: , mismatch: 0, identity: 1.0

gcgcacgcagcacgccaaagcctgacgctgcg	CRISPR spacer
gcgcacgcagcacgccaaagcctgacgctgcg	Protospacer
********************************

62. spacer 3.1|428160|39|NZ_LR594690|CRT matches to NZ_LR594660 (Variovorax sp. PBL-H6 plasmid 2) position: , mismatch: 0, identity: 1.0

ggggacatgccccatccagaacatttcctgtgggcgagc	CRISPR spacer
ggggacatgccccatccagaacatttcctgtgggcgagc	Protospacer
***************************************

63. spacer 3.1|428160|39|NZ_LR594690|CRT matches to NZ_LR594667 (Variovorax sp. SRS16 plasmid 2) position: , mismatch: 0, identity: 1.0

ggggacatgccccatccagaacatttcctgtgggcgagc	CRISPR spacer
ggggacatgccccatccagaacatttcctgtgggcgagc	Protospacer
***************************************

64. spacer 3.1|428160|39|NZ_LR594690|CRT matches to NZ_LR594690 (Variovorax sp. WDL1 plasmid 2) position: , mismatch: 0, identity: 1.0

ggggacatgccccatccagaacatttcctgtgggcgagc	CRISPR spacer
ggggacatgccccatccagaacatttcctgtgggcgagc	Protospacer
***************************************

65. spacer 3.1|428160|39|NZ_LR594690|CRT matches to NZ_LR594672 (Variovorax sp. PBL-E5 plasmid 2) position: , mismatch: 0, identity: 1.0

ggggacatgccccatccagaacatttcctgtgggcgagc	CRISPR spacer
ggggacatgccccatccagaacatttcctgtgggcgagc	Protospacer
***************************************

66. spacer 3.2|428221|37|NZ_LR594690|CRT matches to NZ_LR594660 (Variovorax sp. PBL-H6 plasmid 2) position: , mismatch: 0, identity: 1.0

agacccatggttctcgccactgcacgagcaatcgcac	CRISPR spacer
agacccatggttctcgccactgcacgagcaatcgcac	Protospacer
*************************************

67. spacer 3.2|428221|37|NZ_LR594690|CRT matches to NZ_LR594667 (Variovorax sp. SRS16 plasmid 2) position: , mismatch: 0, identity: 1.0

agacccatggttctcgccactgcacgagcaatcgcac	CRISPR spacer
agacccatggttctcgccactgcacgagcaatcgcac	Protospacer
*************************************

68. spacer 3.2|428221|37|NZ_LR594690|CRT matches to NZ_LR594690 (Variovorax sp. WDL1 plasmid 2) position: , mismatch: 0, identity: 1.0

agacccatggttctcgccactgcacgagcaatcgcac	CRISPR spacer
agacccatggttctcgccactgcacgagcaatcgcac	Protospacer
*************************************

69. spacer 3.2|428221|37|NZ_LR594690|CRT matches to NZ_LR594672 (Variovorax sp. PBL-E5 plasmid 2) position: , mismatch: 0, identity: 1.0

agacccatggttctcgccactgcacgagcaatcgcac	CRISPR spacer
agacccatggttctcgccactgcacgagcaatcgcac	Protospacer
*************************************

70. spacer 3.3|428280|40|NZ_LR594690|CRT matches to NZ_LR594660 (Variovorax sp. PBL-H6 plasmid 2) position: , mismatch: 0, identity: 1.0

agagactctgatgcgcggccggacgttctggtgggggggc	CRISPR spacer
agagactctgatgcgcggccggacgttctggtgggggggc	Protospacer
****************************************

71. spacer 3.3|428280|40|NZ_LR594690|CRT matches to NZ_LR594667 (Variovorax sp. SRS16 plasmid 2) position: , mismatch: 0, identity: 1.0

agagactctgatgcgcggccggacgttctggtgggggggc	CRISPR spacer
agagactctgatgcgcggccggacgttctggtgggggggc	Protospacer
****************************************

72. spacer 3.3|428280|40|NZ_LR594690|CRT matches to NZ_LR594690 (Variovorax sp. WDL1 plasmid 2) position: , mismatch: 0, identity: 1.0

agagactctgatgcgcggccggacgttctggtgggggggc	CRISPR spacer
agagactctgatgcgcggccggacgttctggtgggggggc	Protospacer
****************************************

73. spacer 3.3|428280|40|NZ_LR594690|CRT matches to NZ_LR594672 (Variovorax sp. PBL-E5 plasmid 2) position: , mismatch: 0, identity: 1.0

agagactctgatgcgcggccggacgttctggtgggggggc	CRISPR spacer
agagactctgatgcgcggccggacgttctggtgggggggc	Protospacer
****************************************

74. spacer 3.4|428342|39|NZ_LR594690|CRT matches to NZ_LR594660 (Variovorax sp. PBL-H6 plasmid 2) position: , mismatch: 0, identity: 1.0

gccgacgacgcaaatgagagcgactacttgctgcttccc	CRISPR spacer
gccgacgacgcaaatgagagcgactacttgctgcttccc	Protospacer
***************************************

75. spacer 3.4|428342|39|NZ_LR594690|CRT matches to NZ_LR594667 (Variovorax sp. SRS16 plasmid 2) position: , mismatch: 0, identity: 1.0

gccgacgacgcaaatgagagcgactacttgctgcttccc	CRISPR spacer
gccgacgacgcaaatgagagcgactacttgctgcttccc	Protospacer
***************************************

76. spacer 3.4|428342|39|NZ_LR594690|CRT matches to NZ_LR594690 (Variovorax sp. WDL1 plasmid 2) position: , mismatch: 0, identity: 1.0

gccgacgacgcaaatgagagcgactacttgctgcttccc	CRISPR spacer
gccgacgacgcaaatgagagcgactacttgctgcttccc	Protospacer
***************************************

77. spacer 3.4|428342|39|NZ_LR594690|CRT matches to NZ_LR594672 (Variovorax sp. PBL-E5 plasmid 2) position: , mismatch: 0, identity: 1.0

gccgacgacgcaaatgagagcgactacttgctgcttccc	CRISPR spacer
gccgacgacgcaaatgagagcgactacttgctgcttccc	Protospacer
***************************************

78. spacer 3.5|428403|39|NZ_LR594690|CRT matches to NZ_LR594667 (Variovorax sp. SRS16 plasmid 2) position: , mismatch: 0, identity: 1.0

ggagacgagggcggcggcgtgcacgacgtcctacagaac	CRISPR spacer
ggagacgagggcggcggcgtgcacgacgtcctacagaac	Protospacer
***************************************

79. spacer 3.5|428403|39|NZ_LR594690|CRT matches to NZ_LR594690 (Variovorax sp. WDL1 plasmid 2) position: , mismatch: 0, identity: 1.0

ggagacgagggcggcggcgtgcacgacgtcctacagaac	CRISPR spacer
ggagacgagggcggcggcgtgcacgacgtcctacagaac	Protospacer
***************************************

80. spacer 3.5|428403|39|NZ_LR594690|CRT matches to NZ_LR594672 (Variovorax sp. PBL-E5 plasmid 2) position: , mismatch: 0, identity: 1.0

ggagacgagggcggcggcgtgcacgacgtcctacagaac	CRISPR spacer
ggagacgagggcggcggcgtgcacgacgtcctacagaac	Protospacer
***************************************

81. spacer 3.5|428403|39|NZ_LR594690|CRT matches to NZ_LR594660 (Variovorax sp. PBL-H6 plasmid 2) position: , mismatch: 0, identity: 1.0

ggagacgagggcggcggcgtgcacgacgtcctacagaac	CRISPR spacer
ggagacgagggcggcggcgtgcacgacgtcctacagaac	Protospacer
***************************************

82. spacer 3.6|428464|39|NZ_LR594690|CRT matches to NZ_LR594667 (Variovorax sp. SRS16 plasmid 2) position: , mismatch: 0, identity: 1.0

ggggacgcaggagacaagcaaatggcagccctcaagtcc	CRISPR spacer
ggggacgcaggagacaagcaaatggcagccctcaagtcc	Protospacer
***************************************

83. spacer 3.6|428464|39|NZ_LR594690|CRT matches to NZ_LR594690 (Variovorax sp. WDL1 plasmid 2) position: , mismatch: 0, identity: 1.0

ggggacgcaggagacaagcaaatggcagccctcaagtcc	CRISPR spacer
ggggacgcaggagacaagcaaatggcagccctcaagtcc	Protospacer
***************************************

84. spacer 3.6|428464|39|NZ_LR594690|CRT matches to NZ_LR594672 (Variovorax sp. PBL-E5 plasmid 2) position: , mismatch: 0, identity: 1.0

ggggacgcaggagacaagcaaatggcagccctcaagtcc	CRISPR spacer
ggggacgcaggagacaagcaaatggcagccctcaagtcc	Protospacer
***************************************

85. spacer 3.6|428464|39|NZ_LR594690|CRT matches to NZ_LR594660 (Variovorax sp. PBL-H6 plasmid 2) position: , mismatch: 0, identity: 1.0

ggggacgcaggagacaagcaaatggcagccctcaagtcc	CRISPR spacer
ggggacgcaggagacaagcaaatggcagccctcaagtcc	Protospacer
***************************************

86. spacer 3.7|428525|38|NZ_LR594690|CRT matches to NZ_LR594660 (Variovorax sp. PBL-H6 plasmid 2) position: , mismatch: 0, identity: 1.0

gagacgcctgatactgctcgcgctcgcggttccagcct	CRISPR spacer
gagacgcctgatactgctcgcgctcgcggttccagcct	Protospacer
**************************************

87. spacer 3.7|428525|38|NZ_LR594690|CRT matches to NZ_LR594667 (Variovorax sp. SRS16 plasmid 2) position: , mismatch: 0, identity: 1.0

gagacgcctgatactgctcgcgctcgcggttccagcct	CRISPR spacer
gagacgcctgatactgctcgcgctcgcggttccagcct	Protospacer
**************************************

88. spacer 3.7|428525|38|NZ_LR594690|CRT matches to NZ_LR594690 (Variovorax sp. WDL1 plasmid 2) position: , mismatch: 0, identity: 1.0

gagacgcctgatactgctcgcgctcgcggttccagcct	CRISPR spacer
gagacgcctgatactgctcgcgctcgcggttccagcct	Protospacer
**************************************

89. spacer 3.7|428525|38|NZ_LR594690|CRT matches to NZ_LR594672 (Variovorax sp. PBL-E5 plasmid 2) position: , mismatch: 0, identity: 1.0

gagacgcctgatactgctcgcgctcgcggttccagcct	CRISPR spacer
gagacgcctgatactgctcgcgctcgcggttccagcct	Protospacer
**************************************

90. spacer 3.8|428585|39|NZ_LR594690|CRT matches to NZ_LR594660 (Variovorax sp. PBL-H6 plasmid 2) position: , mismatch: 0, identity: 1.0

gaagtctcaacgccaccgcaagtgatgatgcgacaaccc	CRISPR spacer
gaagtctcaacgccaccgcaagtgatgatgcgacaaccc	Protospacer
***************************************

91. spacer 3.8|428585|39|NZ_LR594690|CRT matches to NZ_LR594667 (Variovorax sp. SRS16 plasmid 2) position: , mismatch: 0, identity: 1.0

gaagtctcaacgccaccgcaagtgatgatgcgacaaccc	CRISPR spacer
gaagtctcaacgccaccgcaagtgatgatgcgacaaccc	Protospacer
***************************************

92. spacer 3.8|428585|39|NZ_LR594690|CRT matches to NZ_LR594690 (Variovorax sp. WDL1 plasmid 2) position: , mismatch: 0, identity: 1.0

gaagtctcaacgccaccgcaagtgatgatgcgacaaccc	CRISPR spacer
gaagtctcaacgccaccgcaagtgatgatgcgacaaccc	Protospacer
***************************************

93. spacer 3.8|428585|39|NZ_LR594690|CRT matches to NZ_LR594672 (Variovorax sp. PBL-E5 plasmid 2) position: , mismatch: 0, identity: 1.0

gaagtctcaacgccaccgcaagtgatgatgcgacaaccc	CRISPR spacer
gaagtctcaacgccaccgcaagtgatgatgcgacaaccc	Protospacer
***************************************

94. spacer 3.9|428646|39|NZ_LR594690|CRT matches to NZ_LR594660 (Variovorax sp. PBL-H6 plasmid 2) position: , mismatch: 0, identity: 1.0

ggagaccggtcaccccgaaagaggacggcatcgcagacc	CRISPR spacer
ggagaccggtcaccccgaaagaggacggcatcgcagacc	Protospacer
***************************************

95. spacer 3.9|428646|39|NZ_LR594690|CRT matches to NZ_LR594667 (Variovorax sp. SRS16 plasmid 2) position: , mismatch: 0, identity: 1.0

ggagaccggtcaccccgaaagaggacggcatcgcagacc	CRISPR spacer
ggagaccggtcaccccgaaagaggacggcatcgcagacc	Protospacer
***************************************

96. spacer 3.9|428646|39|NZ_LR594690|CRT matches to NZ_LR594690 (Variovorax sp. WDL1 plasmid 2) position: , mismatch: 0, identity: 1.0

ggagaccggtcaccccgaaagaggacggcatcgcagacc	CRISPR spacer
ggagaccggtcaccccgaaagaggacggcatcgcagacc	Protospacer
***************************************

97. spacer 3.9|428646|39|NZ_LR594690|CRT matches to NZ_LR594672 (Variovorax sp. PBL-E5 plasmid 2) position: , mismatch: 0, identity: 1.0

ggagaccggtcaccccgaaagaggacggcatcgcagacc	CRISPR spacer
ggagaccggtcaccccgaaagaggacggcatcgcagacc	Protospacer
***************************************

98. spacer 3.10|428707|42|NZ_LR594690|CRT matches to NZ_LR594660 (Variovorax sp. PBL-H6 plasmid 2) position: , mismatch: 0, identity: 1.0

ggggggagccgttcggtgcgatatcagtgaacgagaccggcc	CRISPR spacer
ggggggagccgttcggtgcgatatcagtgaacgagaccggcc	Protospacer
******************************************

99. spacer 3.10|428707|42|NZ_LR594690|CRT matches to NZ_LR594667 (Variovorax sp. SRS16 plasmid 2) position: , mismatch: 0, identity: 1.0

ggggggagccgttcggtgcgatatcagtgaacgagaccggcc	CRISPR spacer
ggggggagccgttcggtgcgatatcagtgaacgagaccggcc	Protospacer
******************************************

100. spacer 3.10|428707|42|NZ_LR594690|CRT matches to NZ_LR594690 (Variovorax sp. WDL1 plasmid 2) position: , mismatch: 0, identity: 1.0

ggggggagccgttcggtgcgatatcagtgaacgagaccggcc	CRISPR spacer
ggggggagccgttcggtgcgatatcagtgaacgagaccggcc	Protospacer
******************************************

101. spacer 3.10|428707|42|NZ_LR594690|CRT matches to NZ_LR594672 (Variovorax sp. PBL-E5 plasmid 2) position: , mismatch: 0, identity: 1.0

ggggggagccgttcggtgcgatatcagtgaacgagaccggcc	CRISPR spacer
ggggggagccgttcggtgcgatatcagtgaacgagaccggcc	Protospacer
******************************************

102. spacer 3.11|428771|37|NZ_LR594690|CRT matches to NZ_LR594660 (Variovorax sp. PBL-H6 plasmid 2) position: , mismatch: 0, identity: 1.0

tggggggggagccggcttgcggcctccgtatccggtg	CRISPR spacer
tggggggggagccggcttgcggcctccgtatccggtg	Protospacer
*************************************

103. spacer 3.11|428771|37|NZ_LR594690|CRT matches to NZ_LR594667 (Variovorax sp. SRS16 plasmid 2) position: , mismatch: 0, identity: 1.0

tggggggggagccggcttgcggcctccgtatccggtg	CRISPR spacer
tggggggggagccggcttgcggcctccgtatccggtg	Protospacer
*************************************

104. spacer 3.11|428771|37|NZ_LR594690|CRT matches to NZ_LR594690 (Variovorax sp. WDL1 plasmid 2) position: , mismatch: 0, identity: 1.0

tggggggggagccggcttgcggcctccgtatccggtg	CRISPR spacer
tggggggggagccggcttgcggcctccgtatccggtg	Protospacer
*************************************

105. spacer 3.11|428771|37|NZ_LR594690|CRT matches to NZ_LR594672 (Variovorax sp. PBL-E5 plasmid 2) position: , mismatch: 0, identity: 1.0

tggggggggagccggcttgcggcctccgtatccggtg	CRISPR spacer
tggggggggagccggcttgcggcctccgtatccggtg	Protospacer
*************************************

106. spacer 3.12|428830|39|NZ_LR594690|CRT matches to NZ_LR594660 (Variovorax sp. PBL-H6 plasmid 2) position: , mismatch: 0, identity: 1.0

ataaacgatggcgacggttggcatcggtccgatgctcct	CRISPR spacer
ataaacgatggcgacggttggcatcggtccgatgctcct	Protospacer
***************************************

107. spacer 3.12|428830|39|NZ_LR594690|CRT matches to NZ_LR594667 (Variovorax sp. SRS16 plasmid 2) position: , mismatch: 0, identity: 1.0

ataaacgatggcgacggttggcatcggtccgatgctcct	CRISPR spacer
ataaacgatggcgacggttggcatcggtccgatgctcct	Protospacer
***************************************

108. spacer 3.12|428830|39|NZ_LR594690|CRT matches to NZ_LR594690 (Variovorax sp. WDL1 plasmid 2) position: , mismatch: 0, identity: 1.0

ataaacgatggcgacggttggcatcggtccgatgctcct	CRISPR spacer
ataaacgatggcgacggttggcatcggtccgatgctcct	Protospacer
***************************************

109. spacer 3.12|428830|39|NZ_LR594690|CRT matches to NZ_LR594672 (Variovorax sp. PBL-E5 plasmid 2) position: , mismatch: 0, identity: 1.0

ataaacgatggcgacggttggcatcggtccgatgctcct	CRISPR spacer
ataaacgatggcgacggttggcatcggtccgatgctcct	Protospacer
***************************************

110. spacer 3.13|428891|38|NZ_LR594690|CRT matches to NZ_LR594660 (Variovorax sp. PBL-H6 plasmid 2) position: , mismatch: 0, identity: 1.0

gagagacgcacgcgtcgttcgacacccgaaactacggc	CRISPR spacer
gagagacgcacgcgtcgttcgacacccgaaactacggc	Protospacer
**************************************

111. spacer 3.13|428891|38|NZ_LR594690|CRT matches to NZ_LR594667 (Variovorax sp. SRS16 plasmid 2) position: , mismatch: 0, identity: 1.0

gagagacgcacgcgtcgttcgacacccgaaactacggc	CRISPR spacer
gagagacgcacgcgtcgttcgacacccgaaactacggc	Protospacer
**************************************

112. spacer 3.13|428891|38|NZ_LR594690|CRT matches to NZ_LR594690 (Variovorax sp. WDL1 plasmid 2) position: , mismatch: 0, identity: 1.0

gagagacgcacgcgtcgttcgacacccgaaactacggc	CRISPR spacer
gagagacgcacgcgtcgttcgacacccgaaactacggc	Protospacer
**************************************

113. spacer 3.13|428891|38|NZ_LR594690|CRT matches to NZ_LR594672 (Variovorax sp. PBL-E5 plasmid 2) position: , mismatch: 0, identity: 1.0

gagagacgcacgcgtcgttcgacacccgaaactacggc	CRISPR spacer
gagagacgcacgcgtcgttcgacacccgaaactacggc	Protospacer
**************************************

114. spacer 4.1|676187|20|NZ_LR594690|CRISPRCasFinder matches to NZ_LR594660 (Variovorax sp. PBL-H6 plasmid 2) position: , mismatch: 0, identity: 1.0

gtgagcgaattgagggacac	CRISPR spacer
gtgagcgaattgagggacac	Protospacer
********************

115. spacer 4.1|676187|20|NZ_LR594690|CRISPRCasFinder matches to NZ_LR594667 (Variovorax sp. SRS16 plasmid 2) position: , mismatch: 0, identity: 1.0

gtgagcgaattgagggacac	CRISPR spacer
gtgagcgaattgagggacac	Protospacer
********************

116. spacer 4.1|676187|20|NZ_LR594690|CRISPRCasFinder matches to NZ_LR594690 (Variovorax sp. WDL1 plasmid 2) position: , mismatch: 0, identity: 1.0

gtgagcgaattgagggacac	CRISPR spacer
gtgagcgaattgagggacac	Protospacer
********************

117. spacer 4.1|676187|20|NZ_LR594690|CRISPRCasFinder matches to NZ_LR594672 (Variovorax sp. PBL-E5 plasmid 2) position: , mismatch: 0, identity: 1.0

gtgagcgaattgagggacac	CRISPR spacer
gtgagcgaattgagggacac	Protospacer
********************

118. spacer 4.2|676230|32|NZ_LR594690|CRISPRCasFinder matches to NZ_LR594660 (Variovorax sp. PBL-H6 plasmid 2) position: , mismatch: 0, identity: 1.0

gtgagcataaggagggcgcataaagccccaca	CRISPR spacer
gtgagcataaggagggcgcataaagccccaca	Protospacer
********************************

119. spacer 4.2|676230|32|NZ_LR594690|CRISPRCasFinder matches to NZ_LR594667 (Variovorax sp. SRS16 plasmid 2) position: , mismatch: 0, identity: 1.0

gtgagcataaggagggcgcataaagccccaca	CRISPR spacer
gtgagcataaggagggcgcataaagccccaca	Protospacer
********************************

120. spacer 4.2|676230|32|NZ_LR594690|CRISPRCasFinder matches to NZ_LR594690 (Variovorax sp. WDL1 plasmid 2) position: , mismatch: 0, identity: 1.0

gtgagcataaggagggcgcataaagccccaca	CRISPR spacer
gtgagcataaggagggcgcataaagccccaca	Protospacer
********************************

121. spacer 4.2|676230|32|NZ_LR594690|CRISPRCasFinder matches to NZ_LR594672 (Variovorax sp. PBL-E5 plasmid 2) position: , mismatch: 0, identity: 1.0

gtgagcataaggagggcgcataaagccccaca	CRISPR spacer
gtgagcataaggagggcgcataaagccccaca	Protospacer
********************************

122. spacer 4.3|676285|35|NZ_LR594690|CRISPRCasFinder matches to NZ_LR594660 (Variovorax sp. PBL-H6 plasmid 2) position: , mismatch: 0, identity: 1.0

ctgtggataaccggccagcttcgcaaaggacgaca	CRISPR spacer
ctgtggataaccggccagcttcgcaaaggacgaca	Protospacer
***********************************

123. spacer 4.3|676285|35|NZ_LR594690|CRISPRCasFinder matches to NZ_LR594667 (Variovorax sp. SRS16 plasmid 2) position: , mismatch: 0, identity: 1.0

ctgtggataaccggccagcttcgcaaaggacgaca	CRISPR spacer
ctgtggataaccggccagcttcgcaaaggacgaca	Protospacer
***********************************

124. spacer 4.3|676285|35|NZ_LR594690|CRISPRCasFinder matches to NZ_LR594690 (Variovorax sp. WDL1 plasmid 2) position: , mismatch: 0, identity: 1.0

ctgtggataaccggccagcttcgcaaaggacgaca	CRISPR spacer
ctgtggataaccggccagcttcgcaaaggacgaca	Protospacer
***********************************

125. spacer 4.3|676285|35|NZ_LR594690|CRISPRCasFinder matches to NZ_LR594672 (Variovorax sp. PBL-E5 plasmid 2) position: , mismatch: 0, identity: 1.0

ctgtggataaccggccagcttcgcaaaggacgaca	CRISPR spacer
ctgtggataaccggccagcttcgcaaaggacgaca	Protospacer
***********************************

126. spacer 5.1|676376|39|NZ_LR594690|PILER-CR matches to NZ_LR594660 (Variovorax sp. PBL-H6 plasmid 2) position: , mismatch: 0, identity: 1.0

tgagggagagtcatgtgcacgtgtcggccaggcccgggc	CRISPR spacer
tgagggagagtcatgtgcacgtgtcggccaggcccgggc	Protospacer
***************************************

127. spacer 5.1|676376|39|NZ_LR594690|PILER-CR matches to NZ_LR594667 (Variovorax sp. SRS16 plasmid 2) position: , mismatch: 0, identity: 1.0

tgagggagagtcatgtgcacgtgtcggccaggcccgggc	CRISPR spacer
tgagggagagtcatgtgcacgtgtcggccaggcccgggc	Protospacer
***************************************

128. spacer 5.1|676376|39|NZ_LR594690|PILER-CR matches to NZ_LR594690 (Variovorax sp. WDL1 plasmid 2) position: , mismatch: 0, identity: 1.0

tgagggagagtcatgtgcacgtgtcggccaggcccgggc	CRISPR spacer
tgagggagagtcatgtgcacgtgtcggccaggcccgggc	Protospacer
***************************************

129. spacer 5.1|676376|39|NZ_LR594690|PILER-CR matches to NZ_LR594672 (Variovorax sp. PBL-E5 plasmid 2) position: , mismatch: 0, identity: 1.0

tgagggagagtcatgtgcacgtgtcggccaggcccgggc	CRISPR spacer
tgagggagagtcatgtgcacgtgtcggccaggcccgggc	Protospacer
***************************************

130. spacer 5.2|676439|53|NZ_LR594690|PILER-CR matches to NZ_LR594660 (Variovorax sp. PBL-H6 plasmid 2) position: , mismatch: 0, identity: 1.0

tccctggacaggccgacctgtgagtgtttcgagggactgagaatccgtgcgcg	CRISPR spacer
tccctggacaggccgacctgtgagtgtttcgagggactgagaatccgtgcgcg	Protospacer
*****************************************************

131. spacer 5.2|676439|53|NZ_LR594690|PILER-CR matches to NZ_LR594667 (Variovorax sp. SRS16 plasmid 2) position: , mismatch: 0, identity: 1.0

tccctggacaggccgacctgtgagtgtttcgagggactgagaatccgtgcgcg	CRISPR spacer
tccctggacaggccgacctgtgagtgtttcgagggactgagaatccgtgcgcg	Protospacer
*****************************************************

132. spacer 5.2|676439|53|NZ_LR594690|PILER-CR matches to NZ_LR594690 (Variovorax sp. WDL1 plasmid 2) position: , mismatch: 0, identity: 1.0

tccctggacaggccgacctgtgagtgtttcgagggactgagaatccgtgcgcg	CRISPR spacer
tccctggacaggccgacctgtgagtgtttcgagggactgagaatccgtgcgcg	Protospacer
*****************************************************

133. spacer 5.2|676439|53|NZ_LR594690|PILER-CR matches to NZ_LR594672 (Variovorax sp. PBL-E5 plasmid 2) position: , mismatch: 0, identity: 1.0

tccctggacaggccgacctgtgagtgtttcgagggactgagaatccgtgcgcg	CRISPR spacer
tccctggacaggccgacctgtgagtgtttcgagggactgagaatccgtgcgcg	Protospacer
*****************************************************

134. spacer 1.1|2400|49|NZ_LR594690|CRISPRCasFinder matches to NZ_LR594660 (Variovorax sp. PBL-H6 plasmid 2) position: , mismatch: 1, identity: 0.98

cttccagcagcagcgtgacggcgtcttgtccctagtagggacaaactaa	CRISPR spacer
cttccagcagcggcgtgacggcgtcttgtccctagtagggacaaactaa	Protospacer
***********.*************************************

135. spacer 1.1|2400|49|NZ_LR594690|CRISPRCasFinder matches to NZ_LR594667 (Variovorax sp. SRS16 plasmid 2) position: , mismatch: 1, identity: 0.98

cttccagcagcagcgtgacggcgtcttgtccctagtagggacaaactaa	CRISPR spacer
cttccagcagcggcgtgacggcgtcttgtccctagtagggacaaactaa	Protospacer
***********.*************************************

136. spacer 1.1|2400|49|NZ_LR594690|CRISPRCasFinder matches to NZ_LR594672 (Variovorax sp. PBL-E5 plasmid 2) position: , mismatch: 1, identity: 0.98

cttccagcagcagcgtgacggcgtcttgtccctagtagggacaaactaa	CRISPR spacer
cttccagcagcggcgtgacggcgtcttgtccctagtagggacaaactaa	Protospacer
***********.*************************************

137. spacer 2.12|426554|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046256 (Sphingobium sp. CAP-1 plasmid p3, complete sequence) position: , mismatch: 6, identity: 0.812

agcagctgcgcggtacgcgcgccccagcacgg-	CRISPR spacer
acgagctgcgcggtaagcgcgtccca-ctcggc	Protospacer
*  ************ *****.**** * ***

138. spacer 2.12|426554|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022748 (Sphingobium hydrophobicum strain C1 plasmid p2, complete sequence) position: , mismatch: 6, identity: 0.812

agcagctgcgcggtacgcgcgccccagcacgg-	CRISPR spacer
acgagctgcgcggtaagcgcgtccca-ctcggc	Protospacer
*  ************ *****.**** * ***

139. spacer 2.12|426554|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NC_009507 (Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence) position: , mismatch: 6, identity: 0.812

agcagctgcgcggtacgcgcgccccagcacgg-	CRISPR spacer
acgagctgcgcggtaagcgcgtccca-ctcggc	Protospacer
*  ************ *****.**** * ***

140. spacer 2.6|426188|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to CP006583 (Mesorhizobium huakuii 7653R plasmid pMHb, complete sequence) position: , mismatch: 7, identity: 0.781

ccctcggcgtcctcgaggccaatcaccagccg	CRISPR spacer
tcctcggtgtcctcgaggccgatcgaaagtcg	Protospacer
.******.************.***.  **.**

141. spacer 2.6|426188|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to CP006582 (Mesorhizobium huakuii 7653R plasmid pMHa, complete sequence) position: , mismatch: 7, identity: 0.781

ccctcggcgtcctcgaggccaatcaccagccg	CRISPR spacer
tcctcggtgtcctcgaggccgatcgaaagtcg	Protospacer
.******.************.***.  **.**

142. spacer 2.12|426554|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to MK937601 (Gordonia phage Charming, complete genome) position: , mismatch: 7, identity: 0.781

agcagctg--cgcggtacgcgcgccccagcacgg	CRISPR spacer
--cagcgaaccgcggtacgcgcgccacagaacga	Protospacer
  **** .  *************** *** ***.

143. spacer 2.12|426554|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to MH976519 (Gordonia phage Tangent, complete genome) position: , mismatch: 7, identity: 0.781

agcagctg--cgcggtacgcgcgccccagcacgg	CRISPR spacer
--cagcgaaccgcggtacgcgcgccacagaacga	Protospacer
  **** .  *************** *** ***.

144. spacer 2.12|426554|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to MH976510 (Gordonia phage Fosterous, complete genome) position: , mismatch: 7, identity: 0.781

agcagctg--cgcggtacgcgcgccccagcacgg	CRISPR spacer
--cagcgaaccgcggtacgcgcgccacagaacga	Protospacer
  **** .  *************** *** ***.

145. spacer 2.12|426554|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to MH153809 (Gordonia phage Sitar, complete genome) position: , mismatch: 7, identity: 0.781

-agcagctgcgcggtacgcgcgccccagcacgg	CRISPR spacer
cagcgacc-cgcggtacgcgcgccacagaacga	Protospacer
 ***..*. *************** *** ***.

146. spacer 2.12|426554|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to MH976518 (Gordonia phage Stultus, complete genome) position: , mismatch: 7, identity: 0.781

-agcagctgcgcggtacgcgcgccccagcacgg	CRISPR spacer
cagcgacc-cgcggtacgcgcgccacagaacga	Protospacer
 ***..*. *************** *** ***.

147. spacer 2.12|426554|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to MH479924 (Gordonia phage Rofo, complete genome) position: , mismatch: 7, identity: 0.781

agcagctg--cgcggtacgcgcgccccagcacgg	CRISPR spacer
--cagcgaaccgcggtacgcgcgccacagaacga	Protospacer
  **** .  *************** *** ***.

148. spacer 2.12|426554|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to MK937594 (Gordonia phage Galadriel, complete genome) position: , mismatch: 7, identity: 0.781

agcagctg--cgcggtacgcgcgccccagcacgg	CRISPR spacer
--cagcgaaccgcggtacgcgcgccacagaacga	Protospacer
  **** .  *************** *** ***.

149. spacer 2.12|426554|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to MN329673 (Gordonia phage Jabberwocky, complete genome) position: , mismatch: 7, identity: 0.781

agcagctg--cgcggtacgcgcgccccagcacgg	CRISPR spacer
--cagcgaaccgcggtacgcgcgccacagaacga	Protospacer
  **** .  *************** *** ***.

150. spacer 2.12|426554|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to MT723934 (Gordonia phage Love, complete genome) position: , mismatch: 7, identity: 0.781

agcagctg--cgcggtacgcgcgccccagcacgg	CRISPR spacer
--cagcgaaccgcggtacgcgcgccacagaacga	Protospacer
  **** .  *************** *** ***.

151. spacer 2.12|426554|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to MH651166 (Gordonia phage Angelicage, complete genome) position: , mismatch: 7, identity: 0.781

agcagctg--cgcggtacgcgcgccccagcacgg	CRISPR spacer
--cagcgaaccgcggtacgcgcgccacagaacga	Protospacer
  **** .  *************** *** ***.

152. spacer 2.12|426554|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to MT639640 (Gordonia phage Paries, complete genome) position: , mismatch: 7, identity: 0.781

agcagctg--cgcggtacgcgcgccccagcacgg	CRISPR spacer
--cagcgaaccgcggtacgcgcgccacagaacga	Protospacer
  **** .  *************** *** ***.

153. spacer 2.12|426554|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to MK977702 (Gordonia terrae phage McKinley, complete genome) position: , mismatch: 7, identity: 0.781

agcagctg--cgcggtacgcgcgccccagcacgg	CRISPR spacer
--cagcgaaccgcggtacgcgcgccacagaacga	Protospacer
  **** .  *************** *** ***.

154. spacer 2.12|426554|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NC_042108 (Gordonia phage Brandonk123, complete genome) position: , mismatch: 7, identity: 0.781

agcagctg--cgcggtacgcgcgccccagcacgg	CRISPR spacer
--cagcgaaccgcggtacgcgcgccacagaacga	Protospacer
  **** .  *************** *** ***.

155. spacer 2.12|426554|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to MH976514 (Gordonia phage Nordenberg, complete genome) position: , mismatch: 7, identity: 0.781

-agcagctgcgcggtacgcgcgccccagcacgg	CRISPR spacer
cagcgacc-cgcggtacgcgcgccacagaacga	Protospacer
 ***..*. *************** *** ***.

156. spacer 2.12|426554|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to MH976508 (Gordonia phage Bibwit, complete genome) position: , mismatch: 7, identity: 0.781

-agcagctgcgcggtacgcgcgccccagcacgg	CRISPR spacer
cagcgacc-cgcggtacgcgcgccacagaacga	Protospacer
 ***..*. *************** *** ***.

157. spacer 2.12|426554|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to MH976506 (Gordonia phage Affeca, complete genome) position: , mismatch: 7, identity: 0.781

agcagctg--cgcggtacgcgcgccccagcacgg	CRISPR spacer
--cagcgaaccgcggtacgcgcgccacagaacga	Protospacer
  **** .  *************** *** ***.

158. spacer 2.12|426554|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to MN329677 (Gordonia phage Keitabear, complete genome) position: , mismatch: 7, identity: 0.781

agcagctg--cgcggtacgcgcgccccagcacgg	CRISPR spacer
--cagcgaaccgcggtacgcgcgccacagaacga	Protospacer
  **** .  *************** *** ***.

159. spacer 2.12|426554|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NC_042045 (Gordonia phage Lennon, complete genome) position: , mismatch: 7, identity: 0.781

-agcagctgcgcggtacgcgcgccccagcacgg	CRISPR spacer
cagcgacc-cgcggtacgcgcgccacagaacga	Protospacer
 ***..*. *************** *** ***.

160. spacer 2.12|426554|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to MH976507 (Gordonia phage Ailee, complete genome) position: , mismatch: 7, identity: 0.781

agcagctg--cgcggtacgcgcgccccagcacgg	CRISPR spacer
--cagcgaaccgcggtacgcgcgccacagaacga	Protospacer
  **** .  *************** *** ***.

161. spacer 2.12|426554|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to MT498035 (Gordonia Phage Barsten, complete genome) position: , mismatch: 7, identity: 0.781

agcagctg--cgcggtacgcgcgccccagcacgg	CRISPR spacer
--cagcgaaccgcggtacgcgcgccacagaacga	Protospacer
  **** .  *************** *** ***.

162. spacer 2.12|426554|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to KR053200 (Gordonia phage GTE6, complete genome) position: , mismatch: 7, identity: 0.781

agcagctgcgcggtacgcgcgccccagcacgg--	CRISPR spacer
agcagctgcgcggtgcgcacg--ccggcgaggtg	Protospacer
**************.***.**  **.**. **

163. spacer 2.12|426554|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to MH976512 (Gordonia phage Geodirt, complete genome) position: , mismatch: 7, identity: 0.781

agcagctg--cgcggtacgcgcgccccagcacgg	CRISPR spacer
--cagcgaaccgcggtacgcgcgccacagaacga	Protospacer
  **** .  *************** *** ***.

164. spacer 2.12|426554|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NC_031239 (Gordonia phage Vivi2, complete genome) position: , mismatch: 7, identity: 0.781

agcagctg--cgcggtacgcgcgccccagcacgg	CRISPR spacer
--cagcgaaccgcggtacgcgcgccacagaacga	Protospacer
  **** .  *************** *** ***.

165. spacer 2.3|426005|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP047178 (Rathayibacter sp. VKM Ac-2759 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

acgcgtgagcaaatcgaggacgaccaatttca	CRISPR spacer
ccgcgtgagcagatcgaggacgaccgtggccc	Protospacer
 **********.*************.   .*

166. spacer 2.4|426066|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032828 (Sphingomonas sp. YZ-8 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

gtgtccaccggcatcgaccacttcgaagaggg	CRISPR spacer
ggctccaatggcatcgaccacttcgactatcg	Protospacer
*  **** .*****************  *  *

167. spacer 2.4|426066|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to MH067967 (Arthrobacter sp. strain ANT_H19B plasmid pA19BH1, complete sequence) position: , mismatch: 8, identity: 0.75

gtgtccaccggcatcgaccacttcgaagaggg	CRISPR spacer
gagtccaccggcatcgactacgtcgtcgtcga	Protospacer
* ****************.** ***  *  *.

168. spacer 2.6|426188|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022195 (Yangia pacifica strain YSBP01 plasmid unnamed5, complete sequence) position: , mismatch: 8, identity: 0.75

ccctcggcgtcctcgaggccaatcaccagccg	CRISPR spacer
agcgggaaatcctcgaggccaatcacccgccg	Protospacer
  *  *. .****************** ****

169. spacer 2.6|426188|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NC_007801 (Jannaschia sp. CCS1 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.75

ccctcggcgtcctcgaggccaatcaccagccg	CRISPR spacer
ttcgcggtgtcctcgaggccaatcgccaatgg	Protospacer
..* ***.****************.***.. *

170. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016613 (Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

171. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022775 (Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

172. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021449 (Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

173. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026091 (Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

174. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to CP023013 (Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

175. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

176. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022762 (Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

177. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049790 (Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

178. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049794 (Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

179. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049788 (Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

180. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022766 (Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

181. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039340 (Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

182. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021763 (Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

183. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026093 (Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

184. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021767 (Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

185. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015116 (Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

186. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016555 (Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

187. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012940 (Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

188. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012944 (Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

189. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012688 (Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

190. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049792 (Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

191. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052069 (Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

192. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016915 (Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

193. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016905 (Ralstonia solanacearum strain KACC 10709 plasmid unnamed1) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

194. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025986 (Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

195. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022769 (Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

196. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023017 (Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

197. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015851 (Ralstonia solanacearum strain YC40-M plasmid, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

198. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022773 (Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

199. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022783 (Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

200. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022791 (Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

201. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014703 (Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

202. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022760 (Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

203. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022789 (Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

204. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022795 (Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

205. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052071 (Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

206. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NC_017575 (Ralstonia solanacearum Po82 megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

207. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022771 (Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

208. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022777 (Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

209. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022799 (Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

210. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022482 (Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

211. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009763 (Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

212. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to CP023015 (Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

213. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022779 (Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

214. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052075 (Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

215. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052085 (Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

216. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052095 (Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

217. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052105 (Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

218. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026308 (Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

219. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052077 (Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

220. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052087 (Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

221. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052097 (Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

222. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to CP047139 (Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

223. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP051295 (Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

224. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052115 (Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

225. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052127 (Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

226. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to CP047137 (Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

227. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022764 (Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

228. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052079 (Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

229. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052089 (Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

230. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052093 (Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

231. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052101 (Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

232. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052099 (Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

233. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052107 (Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

234. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022781 (Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

235. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052117 (Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

236. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052125 (Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

237. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022793 (Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

238. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022797 (Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

239. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022785 (Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

240. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022787 (Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

241. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022756 (Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

242. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052129 (Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

243. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052121 (Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

244. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052123 (Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

245. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052131 (Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

246. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to CP011998 (Ralstonia solanacearum strain YC45 plasmid, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

247. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052073 (Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

248. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052081 (Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

249. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052083 (Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

250. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052109 (Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

251. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052091 (Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

252. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052111 (Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

253. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052103 (Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

254. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052119 (Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

255. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP052113 (Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

256. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022758 (Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcgatgctctcgatggtggc	Protospacer
    .***** ****************** *

257. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029358 (Azospirillum sp. CFH 70021 plasmid unnamed3) position: , mismatch: 8, identity: 0.75

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ggcttcaggatggcgatgctctcgacatcctc	Protospacer
****.* ******************.. .*

258. spacer 2.10|426432|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NC_011879 (Pseudarthrobacter chlorophenolicus A6 plasmid pACHL01, complete sequence) position: , mismatch: 8, identity: 0.75

aggggcacgatgtcgaacgcggtggacgccgg	CRISPR spacer
aagccaacgatggcgaacgcggtggccgccat	Protospacer
*.*   ****** ************ ****.

259. spacer 2.12|426554|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to CP040467 (Streptomyces albidoflavus strain UYFA156 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

agcagctgcgcggtacgcgcgccccagcacgg	CRISPR spacer
cccagctgcgcggtacccccgccccgcccctg	Protospacer
  ************** * ******. * * *

260. spacer 2.1|425883|32|NZ_LR594690|CRISPRCasFinder,CRT matches to NZ_CP043762 (Paenibacillus sp. 37 plasmid pART37, complete sequence) position: , mismatch: 9, identity: 0.719

gtgctcattggcgtgaacttggccatcaaggg	CRISPR spacer
ttgaaacacggcctgaacttggccctcaaggg	Protospacer
 **     .*** *********** *******

261. spacer 2.2|425944|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032695 (Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence) position: , mismatch: 9, identity: 0.719

ctcagcaaatgctcatcgcccgcagcccgtac	CRISPR spacer
ggatactattgctcagcgcccgcagcccttac	Protospacer
    .* * ****** ************ ***

262. spacer 2.4|426066|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045003 (Pseudomonas aeruginosa strain PAG5 plasmid pPAG5, complete sequence) position: , mismatch: 9, identity: 0.719

gtgtccaccggcatcgaccacttcgaagaggg	CRISPR spacer
gccgacaccggcatcgagcacatcgaagacat	Protospacer
*.   ************ *** ******* .

263. spacer 2.4|426066|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032520 (Cupriavidus oxalaticus strain T2 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

gtgtccaccggcatcgaccacttcgaagaggg	CRISPR spacer
cggatgcccggcatcggccactacgaagaggc	Protospacer
  * .  *********.***** ********

264. spacer 2.4|426066|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030074 (Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

gtgtccaccggcatcgaccacttcgaagaggg	CRISPR spacer
cccaccaccgccatcgaccactacgaactgtg	Protospacer
 .  ****** *********** ****  * *

265. spacer 2.6|426188|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NC_009669 (Ochrobactrum anthropi ATCC 49188 plasmid pOANT01, complete sequence) position: , mismatch: 9, identity: 0.719

ccctcggcg-----tcctcgaggccaatcaccagccg	CRISPR spacer
-----agtgtgtgctccccgaggccaatcgccagccg	Protospacer
     .*.*     ***.***********.*******

266. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP036456 (Streptomonospora sp. M2 plasmid phiM2, complete sequence) position: , mismatch: 9, identity: 0.719

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
gtgtcctggctggcgatgccctcgatctactg	Protospacer
*  ****** *********.******   * .

267. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017750 (Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

---ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
tcgagttt---gagggcgatgcgctcgatggtcgc	Protospacer
   .*.*.   ** ******** ***********

268. spacer 2.12|426554|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009292 (Novosphingobium pentaromativorans US6-1 plasmid pLA3, complete sequence) position: , mismatch: 9, identity: 0.719

agcagctgcgcggtacgcgcgccccagcacgg	CRISPR spacer
gcgaacacggcggtatgcgcgctccagcacgg	Protospacer
.  *.*   ******.******.*********

269. spacer 2.15|426737|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024314 (Rhizobium sp. NXC24 plasmid pRspNXC24c, complete sequence) position: , mismatch: 9, identity: 0.719

gcgcacgcagcacgccaaagcctgacgctgcg	CRISPR spacer
gtcggcgcagcacgccagatcctgacgccgat	Protospacer
*.  .************.* ********.*

270. spacer 2.1|425883|32|NZ_LR594690|CRISPRCasFinder,CRT matches to NZ_LR594691 (Variovorax sp. WDL1 plasmid 3) position: , mismatch: 10, identity: 0.688

gtgctcattggcgtgaacttggccatcaaggg	CRISPR spacer
ccgctcatcggcgtgaacttcgccactttgct	Protospacer
 .******.*********** ****..  *

271. spacer 2.2|425944|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to CP027479 (Pseudomonas koreensis strain P19E3 plasmid p2, complete sequence) position: , mismatch: 10, identity: 0.688

ctcagcaaatgctcatcgcccgcagcccgtac	CRISPR spacer
tttttgaaatgctcatcgcccgctgcacggcg	Protospacer
.*.   ***************** ** **

272. spacer 2.4|426066|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to CP054917 (Streptomyces sp. NA02950 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gtgtccaccggcatcgaccacttcgaagaggg	CRISPR spacer
ctgcccaccgacatcgaccacttccgggccct	Protospacer
 **.******.************* ..*

273. spacer 2.5|426127|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022992 (Paraburkholderia aromaticivorans strain BN5 plasmid pBN2, complete sequence) position: , mismatch: 10, identity: 0.688

tcaatgcagcgcgcttgccaggtgatagcgca	CRISPR spacer
aacatgcagcgggcttgccgggtgattattct	Protospacer
   ******** *******.****** .. *

274. spacer 2.6|426188|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NC_015727 (Cupriavidus necator N-1 plasmid pBB1, complete sequence) position: , mismatch: 10, identity: 0.688

ccctcggcgtcctcgaggccaatcaccagccg	CRISPR spacer
tcctcggcgtcctcgaagccaagcagtgcgta	Protospacer
.***************.***** ** ..  ..

275. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039340 (Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence) position: , mismatch: 10, identity: 0.688

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaacgcgatgctctcgatggtgcc	Protospacer
    .*****  *****************

276. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NC_014309 (Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome) position: , mismatch: 10, identity: 0.688

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcaatgctctcgatggcggc	Protospacer
    .***** ***.*************. *

277. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP018720 (Sterolibacteriaceae bacterium J5B plasmid pSTJ2, complete sequence) position: , mismatch: 10, identity: 0.688

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
acggcctgcatggcgatgcgctcgatgcgggc	Protospacer
.   **** ********** *******   *

278. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021765 (Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
ttggtctggaaggcaatgctctcgatggcggc	Protospacer
    .***** ***.*************. *

279. spacer 2.10|426432|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NC_009621 (Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence) position: , mismatch: 10, identity: 0.688

aggggcacgatgtcgaacgcggtggacgccgg	CRISPR spacer
cggcgcacgaagtcgaacgcggtgtgcctttc	Protospacer
 ** ****** ************* .* ..

280. spacer 2.12|426554|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP027859 (Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence) position: , mismatch: 10, identity: 0.688

agcagctgcgcggtacgcgcgccccagcacgg	CRISPR spacer
gcaggctgtgcggtgcgcgcgccccagccgcc	Protospacer
.  .****.*****.*************

281. spacer 2.12|426554|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032054 (Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence) position: , mismatch: 10, identity: 0.688

agcagctgcgcggtacgcgcgccccagcacgg	CRISPR spacer
gcaggctgtgcggtgcgcgcgccccagccgcc	Protospacer
.  .****.*****.*************

282. spacer 2.12|426554|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016560 (Streptomyces clavuligerus strain F613-1 plasmid pSCL4, complete sequence) position: , mismatch: 10, identity: 0.688

agcagctgcgcggtacgcgcgccccagcacgg	CRISPR spacer
gcaggctgtgcggtgcgcgcgccccagccgcc	Protospacer
.  .****.*****.*************

283. spacer 2.8|426310|32|NZ_LR594690|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031358 (Erythrobacter aureus strain YH-07 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.656

ggctcctggatggcgatgctctcgatggtcga	CRISPR spacer
aagcggtggacggcgatgctctcgctggtaac	Protospacer
.. .  ****.************* **** .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

492790 : 547605

Salmonella_phage(27.27%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_102905223.1\|492790_494386_-\|transposase	IS66 family transposase	A0A218MNE7	uncultured_virus	1.7e-108	44.7
WP_146039292.1\|494465_494819_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_083944555.1\|494794_495142_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_003158660.1\|495452_498368_-\|transposase	Tn3-like element IS1071 family transposase	A0A1B0V7H9	Salmonella_phage	1.4e-52	24.0
WP_068685872.1\|499404_501753_-	indolepyruvate ferredoxin oxidoreductase subunit alpha	NA	NA	NA	NA
WP_102906936.1\|502030_502894_+	hypothetical protein	NA	NA	NA	NA
WP_162487220.1\|502886_504635_+	amidohydrolase	NA	NA	NA	NA
WP_083944710.1\|504791_505577_+	LuxR family transcriptional regulator	NA	NA	NA	NA
WP_068683794.1\|505650_506256_+	autoinducer synthase	NA	NA	NA	NA
WP_068683792.1\|506252_507119_+	phytanoyl-CoA dioxygenase family protein	NA	NA	NA	NA
WP_068683790.1\|507365_507875_+	DUF2285 domain-containing protein	NA	NA	NA	NA
WP_068683789.1\|507883_508117_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_068683784.1\|508191_508470_+	hypothetical protein	NA	NA	NA	NA
WP_083944709.1\|508656_508887_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_083944708.1\|508816_509455_+	S26 family signal peptidase	NA	NA	NA	NA
WP_068683781.1\|509442_510069_+	lytic transglycosylase domain-containing protein	I1VXB7	Halocynthia_phage	5.9e-09	43.4
WP_003158660.1\|510314_513230_-\|transposase	Tn3-like element IS1071 family transposase	A0A1B0V7H9	Salmonella_phage	1.4e-52	24.0
WP_083944092.1\|513375_514758_+	chromosome segregation protein SMC	NA	NA	NA	NA
WP_146039569.1\|514895_515936_+	hypothetical protein	NA	NA	NA	NA
WP_068673230.1\|515977_517711_+	exodeoxyribonuclease VII large subunit	M1NLU2	Moumouvirus	7.9e-11	29.6
WP_068673232.1\|517700_518048_+	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA
WP_068673234.1\|518101_519502_-	ThiF family adenylyltransferase	NA	NA	NA	NA
WP_068673236.1\|519503_520016_-	hypothetical protein	NA	NA	NA	NA
WP_068673239.1\|519972_520431_-	hypothetical protein	NA	NA	NA	NA
WP_068673241.1\|520444_520957_-	hypothetical protein	NA	NA	NA	NA
WP_068673243.1\|521057_524399_-	UvrD-helicase domain-containing protein	A7KV33	Bacillus_phage	3.0e-30	23.6
WP_068673245.1\|524395_525031_-	hypothetical protein	NA	NA	NA	NA
WP_068673247.1\|525027_525795_-	response regulator transcription factor	NA	NA	NA	NA
WP_068673249.1\|527373_527637_+	hypothetical protein	NA	NA	NA	NA
WP_102905968.1\|527722_528951_-\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	1.4e-118	73.5
WP_068673255.1\|529040_529520_-	hypothetical protein	A0A0K0QTF6	Citrobacter_phage	2.3e-05	34.4
WP_068673257.1\|529783_530455_-	DUF4145 domain-containing protein	NA	NA	NA	NA
WP_068673259.1\|531228_531603_+	STAS/SEC14 domain-containing protein	NA	NA	NA	NA
WP_068673261.1\|531639_532563_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_068673263.1\|533065_533812_+	hypothetical protein	NA	NA	NA	NA
WP_159597437.1\|533925_534873_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_083944094.1\|534931_535480_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_068673269.1\|535493_535829_+	hypothetical protein	NA	NA	NA	NA
WP_068673271.1\|535838_536918_+	maleylacetate reductase	NA	NA	NA	NA
WP_068673272.1\|536919_538098_+	muconate cycloisomerase family protein	NA	NA	NA	NA
WP_068673274.1\|538090_538789_+	dienelactone hydrolase family protein	NA	NA	NA	NA
WP_083944095.1\|539240_539549_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_068673276.1\|539594_540101_-	hypothetical protein	NA	NA	NA	NA
WP_083944097.1\|540118_541567_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	6.3e-70	36.3
WP_068673278.1\|541781_542129_-	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	9.6e-09	42.3
WP_068673280.1\|542125_542500_-	hypothetical protein	NA	NA	NA	NA
WP_162487221.1\|542516_543122_-	hypothetical protein	NA	NA	NA	NA
WP_068673284.1\|543113_544577_+	AAA family ATPase	NA	NA	NA	NA
WP_003158660.1\|544689_547605_-\|transposase	Tn3-like element IS1071 family transposase	A0A1B0V7H9	Salmonella_phage	1.4e-52	24.0

DBSCAN-SWA_2

659554 : 666161

Bacillus_virus(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_068673927.1\|659554_660229_+	NUDIX hydrolase	G3MA14	Bacillus_virus	2.3e-19	30.2
WP_068673924.1\|660241_660688_+	NUDIX hydrolase	A0A023W5N2	Serratia_phage	1.1e-20	45.6
WP_068673922.1\|660710_661208_+	regulatory protein RecX	NA	NA	NA	NA
WP_068673919.1\|661266_661800_+	macro domain-containing protein	H6X3J2	Enterobacteria_phage	6.8e-14	32.7
WP_068673917.1\|662011_662572_+	hypothetical protein	NA	NA	NA	NA
WP_068673915.1\|662642_663188_+	alpha-ketoglutarate-dependent dioxygenase AlkB	A0A248SJV3	Salicola_phage	2.4e-46	47.2
WP_068673913.1\|663482_664070_-	ribonuclease HII	D2TEQ2	Emiliania_huxleyi_virus	1.0e-26	40.4
WP_146041332.1\|664258_664597_-	hypothetical protein	NA	NA	NA	NA
WP_068673909.1\|664757_665150_+	hypothetical protein	NA	NA	NA	NA
WP_162487226.1\|665249_666161_+	S49 family peptidase	F8QZT1	Wolbachia_phage	3.6e-15	28.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_LR594689

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_LR594689_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR594689_1

3876746-3876895

Orphan

Consensus_repeat	Method
GGTGTTGCCCCCGGGAGGGGGTGGGCGGCTACACGAAGTGAGCCAACCTGGGGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LR594689_1

>merge|NZ_LR594689|1|3876746-3876895|CRISPRCasFinder
GGTGTTGCCCCCGGGAGGGGGTGGGCGGCTACACGAAGTGAGCCAACCTGGGGGCGAGCAACATCCCCACCGCGGAACCGGCTTTGCCGGGCCGCTGGTGTTGCCCCCGGTAGGGGGTGGGCGGCTACACGAAGTGAGCCAACCTGGGGG

>NZ_LR594689|1|1|3876746-3876895|CRISPRCasFinder
GGTGTTGCCCCCGGGAGGGGGTGGGCGGCTACACGAAGTGAGCCAACCTGGGGG	CGAGCAACATCCCCACCGCGGAACCGGCTTTGCCGGGCCGCT
GGTGTTGCCCCCGGTAGGGGGTGGGCGGCTACACGAAGTGAGCCAACCTGGGGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR594689.1\|WP_068674711.1\|3878680_3879160_-\|Lrp/AsnC-ligand-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|183009
NZ_LR594689.1\|WP_083944175.1\|3872342_3872804_+\|YraN-family-protein	unknown	unknown	gnl\|CDD\|237786
NZ_LR594689.1\|WP_068674707.1\|3883692_3884316_+\|DUF2242-domain-containing-protein	unknown	unknown	gnl\|CDD\|378349
NZ_LR594689.1\|WP_068674713.1\|3876905_3877949_-\|type-IV-pilus-twitching-motility-protein-PilT	unknown	unknown	gnl\|CDD\|225364
NZ_LR594689.1\|WP_068674699.1\|3884325_3884553_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594689.1\|WP_068674709.1\|3879255_3882219_+\|L-glutamate-gamma-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|237017
NZ_LR594689.1\|WP_068674716.1\|3874549_3875470_-\|NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224995
NZ_LR594689.1\|WP_068674715.1\|3875505_3876642_-\|PilT/PilU-family-type-4a-pilus-ATPase	unknown	unknown	gnl\|CDD\|227341
NZ_LR594689.1\|WP_068674697.1\|3884758_3885136_+\|VOC-family-protein	unknown	unknown	gnl\|CDD\|319898
NZ_LR594689.1\|WP_102905122.1\|3877986_3878673_+\|YggS-family-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|143497
NZ_LR594689.1\|WP_068674720.1\|3868856_3869198_+\|ferredoxin-family-protein	unknown	unknown	gnl\|CDD\|224069
NZ_LR594689.1\|WP_162487153.1\|3869209_3869860_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380339
NZ_LR594689.1\|WP_068674718.1\|3871478_3872414_-\|16S-rRNA-(cytidine(1402)-2'-O)-methyltransferase	unknown	unknown	gnl\|CDD\|223390
NZ_LR594689.1\|WP_068674901.1\|3882303_3883575_+\|Glu/Leu/Phe/Val-dehydrogenase	unknown	unknown	gnl\|CDD\|223411
NZ_LR594689.1\|WP_102905120.1\|3873520_3874255_+\|BON-domain-containing-protein	unknown	unknown	gnl\|CDD\|225379
NZ_LR594689.1\|WP_068674717.1\|3872897_3873524_+\|SIS-domain-containing-protein	unknown	unknown	gnl\|CDD\|237567
NZ_LR594689.1\|WP_068674719.1\|3870007_3870625_+\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|225136
NZ_LR594689.1\|WP_068674696.1\|3885282_3885480_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594689.1\|WP_068674905.1\|3870708_3871437_+\|glutathione-S-transferase	unknown	unknown	gnl\|CDD\|373097
NZ_LR594689.1\|WP_068674694.1\|3885489_3886407_-\|arginase	unknown	unknown	gnl\|CDD\|212515

Protein	Function_ID	Function_description	E-value
NZ_LR594689.1\|WP_068674711.1\|3878680_3879160_-\|Lrp/AsnC-ligand-binding-domain-containing-protein	gnl\|CDD\|183009	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp.	4.64716e-69
NZ_LR594689.1\|WP_083944175.1\|3872342_3872804_+\|YraN-family-protein	gnl\|CDD\|237786	PRK14673, PRK14673, hypothetical protein; Provisional.	1.02656e-47
NZ_LR594689.1\|WP_068674707.1\|3883692_3884316_+\|DUF2242-domain-containing-protein	gnl\|CDD\|378349	pfam10001, DUF2242, Uncharacterized protein conserved in bacteria (DUF2242). This domain is found in various hypothetical bacterial proteins, and has no known function.	1.64958e-68
NZ_LR594689.1\|WP_068674713.1\|3876905_3877949_-\|type-IV-pilus-twitching-motility-protein-PilT	gnl\|CDD\|225364	COG2805, PilT, Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion].	0
NZ_LR594689.1\|WP_068674709.1\|3879255_3882219_+\|L-glutamate-gamma-semialdehyde-dehydrogenase	gnl\|CDD\|237017	PRK11904, PRK11904, bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA.	0
NZ_LR594689.1\|WP_068674716.1\|3874549_3875470_-\|NAD(P)-dependent-oxidoreductase	gnl\|CDD\|224995	COG2084, MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism].	1.57417e-114
NZ_LR594689.1\|WP_068674715.1\|3875505_3876642_-\|PilT/PilU-family-type-4a-pilus-ATPase	gnl\|CDD\|227341	COG5008, PilU, Tfp pilus assembly protein, ATPase PilU [Cell motility and secretion / Intracellular trafficking and secretion].	0
NZ_LR594689.1\|WP_068674697.1\|3884758_3885136_+\|VOC-family-protein	gnl\|CDD\|319898	cd06587, VOC, vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases.	7.08884e-11
NZ_LR594689.1\|WP_102905122.1\|3877986_3878673_+\|YggS-family-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|143497	cd06824, PLPDE_III_Yggs_like, Pyridoxal 5-phosphate (PLP)-binding TIM barrel domain of Type III PLP-Dependent Enzymes, Yggs-like proteins. This subfamily contains mainly uncharacterized proteobacterial proteins with similarity to the hypothetical Escherichia coli protein YggS, a homolog of yeast YBL036c, which is homologous to a Pseudomonas aeruginosa gene that is co-transcribed with a known proline biosynthetic gene. Like yeast YBL036c, Yggs is a single domain monomeric protein with a typical TIM-barrel fold. Its structure, which shows a covalently-bound PLP cofactor, is similar to the N-terminal domain of the fold type III PLP-dependent enzymes, bacterial alanine racemase and eukaryotic ornithine decarboxylase, which are two-domain dimeric proteins. YggS has not been characterized extensively and its biological function is still unkonwn.	5.3586e-139
NZ_LR594689.1\|WP_068674720.1\|3868856_3869198_+\|ferredoxin-family-protein	gnl\|CDD\|224069	COG1146, COG1146, Ferredoxin [Energy production and conversion].	5.88895e-11
NZ_LR594689.1\|WP_162487153.1\|3869209_3869860_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|380339	cd02209, cupin_XRE_C, XRE (Xenobiotic Response Element) family transcriptional regulators, C-terminal cupin domain. This family contains transcriptional regulators containing an N-terminal XRE (Xenobiotic Response Element) family helix-turn-helix (HTH) DNA-binding domain and a C-terminal cupin domain. Included in this family is Escherichia coli transcription factor SutR (YdcN) that plays a regulatory role in sulfur utilization; it regulates a set of genes involved in the generation of sulfate and its reduction, the synthesis of cysteine, the synthesis of enzymes containing Fe-S as cofactors, and the modification of tRNA with use of sulfur-containing substrates. This family belongs to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold capable of homodimerization.	7.83813e-26
NZ_LR594689.1\|WP_068674718.1\|3871478_3872414_-\|16S-rRNA-(cytidine(1402)-2'-O)-methyltransferase	gnl\|CDD\|223390	COG0313, COG0313, Predicted methyltransferases [General function prediction only].	1.47019e-105
NZ_LR594689.1\|WP_068674901.1\|3882303_3883575_+\|Glu/Leu/Phe/Val-dehydrogenase	gnl\|CDD\|223411	COG0334, GdhA, Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism].	0
NZ_LR594689.1\|WP_102905120.1\|3873520_3874255_+\|BON-domain-containing-protein	gnl\|CDD\|225379	COG2823, OsmY, Predicted periplasmic or secreted lipoprotein [General function prediction only].	1.00094e-40
NZ_LR594689.1\|WP_068674717.1\|3872897_3873524_+\|SIS-domain-containing-protein	gnl\|CDD\|237567	PRK13936, PRK13936, phosphoheptose isomerase; Provisional.	1.23109e-82
NZ_LR594689.1\|WP_068674719.1\|3870007_3870625_+\|methyltransferase-domain-containing-protein	gnl\|CDD\|225136	COG2226, UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism].	5.40187e-26
NZ_LR594689.1\|WP_068674905.1\|3870708_3871437_+\|glutathione-S-transferase	gnl\|CDD\|373097	pfam14497, GST_C_3, Glutathione S-transferase, C-terminal domain. This domain is closely related to pfam00043.	8.52089e-30
NZ_LR594689.1\|WP_068674694.1\|3885489_3886407_-\|arginase	gnl\|CDD\|212515	cd09989, Arginase, Arginase family. This family includes arginase, also known as arginase-like amidino hydrolase family, and related proteins. Arginase is a binuclear Mn-dependent metalloenzyme and catalyzes hydrolysis of L-arginine to L-ornithine and urea (Arg, EC 3.5.3.1), the reaction being the fifth and final step in the urea cycle, providing the path for the disposal of nitrogenous compounds. Arginase controls cellular levels of arginine and ornithine which are involved in protein biosynthesis, and in production of creatine, polyamines, proline and nitric acid. In vertebrates, at least two isozymes have been identified: type I (ARG1) cytoplasmic or hepatic liver-type arginase and type II (ARG2) mitochondrial or non-hepatic arginase. Point mutations in human arginase ARG1 gene lead to hyperargininemia with consequent mental disorders, retarded development and early death. Hyperargininemia is associated with a several-fold increase in the activity of the mitochondrial arginase (ARG2), causing persistent ureagenesis in patients. ARG2 overexpression plays a critical role in the pathophysiology of cholesterol mediated endothelial dysfunction. Thus, arginase is a therapeutic target to treat asthma, erectile dysfunction, atherosclerosis and cancer.	1.10075e-126

>NZ_LR594689.1|WP_068674715.1|3875505_3876642_-|PilT/PilU-family-type-4a-pilus-ATPase
MERDQASQFINELLKLMVSRNGSDLFITADFPPAIKIDGKVTKVSQQALGSQHTLALTRSIMNDRQTAEFERTKECNFAISPTGIGRFRVNAFVQQGKVGMVLRTIPAKLPTIDGLGMPQVLKDVTMTKRGLCILVGATGSGKSTTLAAMIDWRNENSFGHIVTVEDPVEFVHPHKNCVVTQREVGIDTDSWEAALKNTLRQAPDVILMGEIRDRETMEHAVAFAETGHLCMATLHANSANQALDRIINFFPEERRPQLLMDLSLNLRSLISQRLIPTEDGRGRIAAVEILLNTPLITDLIYKGEVGEIKEVMKKSRNLGMQTFDQALFDLFETNMISFEDALRNADSANDLRLQIKLNSQRARTTDLSAGTEHFAIV
>NZ_LR594689.1|WP_068674716.1|3874549_3875470_-|NAD(P)-dependent-oxidoreductase
MSSLNPRTYDPLPAHKTAFLGLGVMGYPMAGHLALAGHDVAVYNRTAAKSAAWQEEFAAQAKSSLRHAPTPREAAAGADIVFCCVGNDDDLRSVVLGADGALAGMAKGAVFVDHTTASADVARELSKAALERGVQFIDAPVSGGQAGAQNGALTVMCGGDATAFERVKPVIAAFARAVTRLGDSGSGQLAKMVNQIAIAGLVQGLSEAIAFGQRAGLDMNEVLAVIGKGAAQSWQMDNRGKTMIEGKFEFGFAVDWMRKDLGLVLDEAKRNGARLPVTALVDQFYADVQQAGGRRWDTSSLITRLK
>NZ_LR594689.1|WP_102905120.1|3873520_3874255_+|BON-domain-containing-protein
MTTTSLQRLALALTAGAALAAGLSACVPLVVGGAAVVGAGMVATDRRSSGAQLDDQGIELRASARVREIANDQMYVSVTSFNRQVLLTGAVGNEADRRRVEDVVRRVDNVRSVVNELTIGAPSTFQQRSNDTLITGKIKASLLDAKDVFANSFKVVVDRGTVYLMGLATRRETDRATDIARGVSGVEKVVRVVEIVSEAELAGQPQQGGSGAASGSRVPLPPMEPLPPAGSSQPPGGAIATPVR
>NZ_LR594689.1|WP_068674717.1|3872897_3873524_+|SIS-domain-containing-protein
MLEQRIQQHFIDSADLKYQAGPLLGKPISQAMQALLACMTSGGKILACGAGVSGLLAVQFAAQFVGRFERDRPGLGAIALPFDAIDPAADTSEAGDPDRFARQVRALGQGGDVLLALSASGQSAAVLAALEAAHARDMTVVALLGNASGGGASSNPGGAVARALRETDVQICVPHERAARIHEVHLLVLHCLCDGVDAQLLGEQEGSI
>NZ_LR594689.1|WP_083944175.1|3872342_3872804_+|YraN-family-protein
MLRARGIARGRQGCAEGGGGEGAQDVFLQDKKVAEATTKQRGDAAEAAALAHLQSAGLVLVARNYRTPGRGGGEIDLIMRDPRDGTLVFVEVRHRADASHGGAASSITGVKRRRIVFAARHYLSRLRTLPPCRFDVVLVEARIEWICAAFDAD
>NZ_LR594689.1|WP_068674718.1|3871478_3872414_-|16S-rRNA-(cytidine(1402)-2'-O)-methyltransferase
MSSLAPASFGAALPAARDAAGAQHYPEGVLYVVATPIGNLADITLRALHVLQLVDAVACEDTRHTQALLRAYGIERPAAGLLALHQHNEAEAAQAVIARLAAGERIAYVSDAGTPGVSDPGARLASAVRAAGLRVLPLPGASSVTTLVSAAGLVADGDAGSAFVFAGFLPAKPGERDAAVQALAAEPRSVVLLEAPHRIEALARSLAVLGERRVTVGRELTKQFEEIATLPAAELPAWLAASRDRTRGEFALALHPAPAAADDDAEARRVLQLLLAELPLKSAVRLAAEISGAPRNALYDLALRLREEPSD
>NZ_LR594689.1|WP_068674905.1|3870708_3871437_+|glutathione-S-transferase
MTYQLHYWPSIQGRGEFVRLALEAAGAEYVDVAREPTGRGGGEAALGRRLGDPDNPRASFAPPFLVDGDIVVGQTAAILLYLGPRLGLAGTGERDALWTHQLQLTIADVVAEAHDTHHPISTGAYYEEQREAAQARARCFREERIPKFLDWFERVLQRNPAGDLHLVGNSLTYADLSLFQLVAGLRYAFPKATARALARTPAVVKLHANIGRRQQVHDYLQSPRRIPFNEEGIFRHYPELDG
>NZ_LR594689.1|WP_068674719.1|3870007_3870625_+|methyltransferase-domain-containing-protein
MSEAGVARAYKRLAPVYDLLFGQVLEPGRRRMADVVRTLQPASLLEVGVGTGLALARYPTTSKIVGIDLSHEMLERARERARGLPDHQITIEYMNAERTSFPDGSFDCVTLPYVLSVTPRPAELVREIRRVCKPEGTIVVLNHFSGSGFWWLMERAFRSAAEHIGFRSDFRYEEQILSHDWQVVSIESVNLLGLSRLVVLKNRRA
>NZ_LR594689.1|WP_162487153.1|3869209_3869860_+|helix-turn-helix-transcriptional-regulator
MPTTKRPETRTSGETNATSQDDTPLPVDLGARIKQQRLAAGLTLAELAERAGFGKAYLSRIENGKKVPPIGTLSRIADVLGIEAAALLQTAGVRARWRGASVVRKSEKRATVLGGSAFGYDYFALTDATEGRALQPFLFSFPAEVDKFVFFEHDGEELLHVLTGRIEWQVGMDKYILEAGDTIHFDSRMPHRGHSLSGAATALVVMYSPGKAANLA
>NZ_LR594689.1|WP_068674720.1|3868856_3869198_+|ferredoxin-family-protein
MAYVVTDACIRCRYGECIEVCPQDAFREGPNFVVIDPHACANCALCEMVCPVQAIFPEQGLGDALRPFVALNASLARSWPRAVFRGPLPDADEWASKESKLAQLDAGTPEVRP
>NZ_LR594689.1|WP_068674713.1|3876905_3877949_-|type-IV-pilus-twitching-motility-protein-PilT
MDITQLLAFSVKNKASDLHLSSGLPPMIRVHGDVRRINVDALDHKAVHAMVYDIMSDTHRKHYEEFLEVDFSFEIDGLARFRVNAFNQARGAAAVFRTIPSKILTLEQLNAPRIFGELALKPRGLVLVTGPTGSGKSTTLAAMINYLNETEYGHILTVEDPIEFVHESKKCLINQREVGPMTLSFANALRSALREDPDAILVGEMRDLETIRLAMTAAETGHLVFGTLHTSSAAKTIDRIIDVFPGEEKEMIRAMLSESLQAVVSQTLCKTKDGQGRVAAHEIMLGTSAIRNLIREGKVAQMYSSIQTGSGQGMQTLDQCLTDLVRRNVISAAEARGKAKIPENFPG
>NZ_LR594689.1|WP_102905122.1|3877986_3878673_+|YggS-family-pyridoxal-phosphate-dependent-enzyme
MTMIGDKLQQVRARIVTACTAAGRDPASVRLLAVSKTFPAEAVREARTAGQIAFGENYVQEGVAKIEALSDLRAELEWHCIGPLQSNKTRPVAAHFDWVHSIDRLKIAERLAEQRPAELPPLQVCLQVNVDAGANKSGVAPEDALELARAVAALPRLRLRGLMAIPEPTPDYEAQRALFLRAAAVFEEMRGAGLEVDTLSLGMSADLEAAIAAGSTLVRIGTAIFGAR
>NZ_LR594689.1|WP_068674711.1|3878680_3879160_-|Lrp/AsnC-ligand-binding-domain-containing-protein
MNAEAINLDRIDLKLLKILQEDGRISNLKLAEAVSLSPTAVLARVQRLTREGFIQGYEARLDPHKLGRGFTVFVEVLLDRTTANVFDQFKAAVQVRDEIMECHMVAGGFDYLLKTRMADMAAYREFAGTVLWQLPGVRETRTYAVMEEVKNSARIPLGA
>NZ_LR594689.1|WP_068674709.1|3879255_3882219_+|L-glutamate-gamma-semialdehyde-dehydrogenase
MRLPTPYRPEAEIVSRCLASLKGALDWPSAASSAAPWVRAVREHPPHFWAMESLLREYPISSAEGLALMRLAEALLRVPDAETAIALTADQLGRADFEGAADSTLARLSGSAIALSKKFLPTPGETGAEPGLMARVGARTVVAASLRAVQLLGRQFVLGQTIEEAMGEARSAHQKHQALRFSYDMLGEGARTEADARRYLDSYDSAIRSIAARADREGAPEHNDGISIKLSALHPRYEDAQRERVLRELVPRVWQLCELAADARLNLTIDAEEVDRLELSLEVFEALAARVAAERPQWGGFGLAIQAYQTRSLELVEHLVVLARRYELRLMCRLVKGAYWDAEIKRAQEMGLPHYPVFTHKHHSDISYLACARALLAAPDAIYPQFATHNAGTIAAIVQMAGGTPFELQRLHGMGEGIYREVMKRTGAPVRIYAPVGRHKDLLAYLVRRLLENGANSSFVNQLGDESIGLDELLVSPLWLDSRAVLPLPADLYGPPPARRNSRGLDLADASMRAPLLAAHADCVVPAVAEFDPAQAAQAVAKSTASYPAWRKAPVAQRAAILRRAADTLQAQLPRFCALLVKEAFKTWGDAVAEVREAVDFLRYYADEAERVMQPVTLPGPTGESNELRLTGRGPWVCISPWNFPLAIFAGQVAAALATGNTVLAKPAEQTPAVASEAVRLLHAAGVPADALQLLRGPGETVGAALVATPGVAGVVFTGSTQVAKTIHRALAGKDGPIVPLIAETGGINAMLVDSSALPEQVVDAVVQSAFRSAGQRCSALRLLILHDSIADEVIRMLQGAAAELVAGDPALLSTDVGPVIDREAFEGIRRHLERLDSEARVLVAGSAPADAIPHLIAPHAYELPSIERVQCEIFGPVLHVVRWSGEPQAVIDRINALGFGLTLGIQTRIDSRAQALAARAHVGNVYVNRNIIGAVVGVQPFGGEGLSGTGPKAGGPHYLPRFCAEQTLTINTTAAGGNAALLAASA
>NZ_LR594689.1|WP_068674901.1|3882303_3883575_+|Glu/Leu/Phe/Val-dehydrogenase
MSADLSYVQPTPNSPWGTYLSQVDRVVPYLGELSRWVETLKRPKRALIVDVPIEMDDGSIAHFEGYRVQHNMSRGPGKGGVRFHPDVTLEEVMALSAWMTVKTAAVNLPYGGAKGGIRVDPKKLTHKELERVTRRYTSEIGIIIGPQQDIPAPDVNTNAQVMAWMMDTYSMNVGGTATGVVTGKPLHLGGSLGRVKATGRGVFVTGREAARRLGLDLRGARVAVQGFGNVGSVAAELFAEAGAKIVAVQDHTGTIVNANGLDLKTLLPLARTEGVVGFKGGDVIANESFWNVACDILIPAALEGQLTAERAQKTQARLVLEGANGPTVPTADDILAERGVLVVPDVICNAGGVTVSYFEWVQDFSSFFWDEDEINQRLDRIMMNALNQIWDTADRHRITLRTATFAVACERILMARQERGLYP
>NZ_LR594689.1|WP_068674707.1|3883692_3884316_+|DUF2242-domain-containing-protein
MRPPFPHAALALLFTLVLAGCGITSPRQVSYDPEEFDSTTTHTRSFRAPQAQTCEAARRALLSQGYLVTAANADLVAGRKSFQPASEVHVEVELRVVCARDSGGASTIAFASALQDRYSLKKVNNSASVGVGALGSLSLPFSSSDDALVKVASETLTDERFYDRFFALIDRFLVPEAVQSTPVAPPAMPAPSTDSPLRPVPLSPSRG
>NZ_LR594689.1|WP_068674699.1|3884325_3884553_-|hypothetical-protein
MDVRKIGLLVEQPFDGSYYWVIHEDVRHDGRFEAMQRAERPFATYAAALAQGYGVMQRLCGLTGLPACAARSVSI
>NZ_LR594689.1|WP_068674697.1|3884758_3885136_+|VOC-family-protein
MLGNKEAVANLAVKDLDRAKQFYEEILGLVPVEAEGDDLIVFQSGVSTLNVYRSQYAGTNQATAVTWAVGDEIEALVSALKAKGVRFERYDMPETRLEGDIHVMGEMKVAWFKDPDGNILNLINQ
>NZ_LR594689.1|WP_068674696.1|3885282_3885480_+|hypothetical-protein
MSSSHQKRTFEEWARSLEESNAGTLPETGQPLVSSTEWARLEDVAVRRSLGLSVRVFPSVFARLV
>NZ_LR594689.1|WP_068674694.1|3885489_3886407_-|arginase
MSTFTTVELIGAPTDIGASVRGAGMGPDALRVADIAGTLSRLGYEIVDRGNLAGPATPWADPANGLRHLDEVVSWNRAVYDAVDRALGAGHLPLLMGGDHCLAIGSVSAIAWHARRRGKKLRVLWLDAHSDVNTERTSPSGNIHGMPVACLLGHGPQALSGWSGEAAALEHDSIRFIGIRSVDAEEKAAIRALSLNVFDMRHIDEHGMRTTMTEALQDIDEETHLHVSFDLDCLDPDYAPGVGTGVRGGPTWREMQLCMEMIADTGRLASLDVTELNPALDVRNRTAEVAVELIESLFGKSTLVR

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Crispr_ID: NZ_LR594689_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR594689_2

4903789-4903929

Orphan

Consensus_repeat	Method
CCCCGGTAGGGGGTGGGCGCCCGACACGAAGTGCGGGCAACCTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LR594689_2

>merge|NZ_LR594689|2|4903789-4903929|CRISPRCasFinder
CCCCGGTAGGGGGTGGGCGCCCGACACGAAGTGCGGGCAACCTGGGGGCGAGCAACATTCCCACCGCGGAACCGGCTTTGCCGGGCCGCTGGTGTGGCCCCGGTAGGGGCTGGGCGCCCGACACGAAGTGCGGGCAACCTG

>NZ_LR594689|2|2|4903789-4903929|CRISPRCasFinder
CCCCGGTAGGGGGTGGGCGCCCGACACGAAGTGCGGGCAACCTG	GGGGCGAGCAACATTCCCACCGCGGAACCGGCTTTGCCGGGCCGCTGGTGTGG
CCCCGGTAGGGGCTGGGCGCCCGACACGAAGTGCGGGCAACCTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR594689.1\|WP_068680055.1\|4911230_4912238_-\|sn-glycerol-3-phosphate-import-ATP-binding-protein-UgpC	unknown	unknown	gnl\|CDD\|236947
NZ_LR594689.1\|WP_068680031.1\|4896997_4897555_-\|CNP1-like-family-protein	unknown	unknown	gnl\|CDD\|378041
NZ_LR594689.1\|WP_068680025.1\|4894467_4894725_+\|50S-ribosomal-protein-L27	unknown	unknown	gnl\|CDD\|235464
NZ_LR594689.1\|WP_068680050.1\|4906326_4907598_-\|glutamyl-tRNA-reductase	unknown	unknown	gnl\|CDD\|234592
NZ_LR594689.1\|WP_068680054.1\|4910493_4911234_-\|glycerophosphodiester-phosphodiesterase	unknown	unknown	gnl\|CDD\|236524
NZ_LR594689.1\|WP_068680058.1\|4912260_4913109_-\|sn-glycerol-3-phosphate-ABC-transporter-permease-UgpE	unknown	unknown	gnl\|CDD\|182875
NZ_LR594689.1\|WP_068680046.1\|4904299_4905154_-\|peptide-chain-release-factor-N(5)-glutamine-methyltransferase	unknown	unknown	gnl\|CDD\|236467
NZ_LR594689.1\|WP_068680029.1\|4895862_4896993_+\|glutamate-5-kinase	unknown	unknown	gnl\|CDD\|235460
NZ_LR594689.1\|WP_102906105.1\|4907974_4910377_-\|mechanosensitive-ion-channel-family-protein	unknown	unknown	gnl\|CDD\|225803
NZ_LR594689.1\|WP_068680040.1\|4902109_4903117_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|273258
NZ_LR594689.1\|WP_068680028.1\|4894793_4895846_+\|GTPase-ObgE	unknown	unknown	gnl\|CDD\|237048
NZ_LR594689.1\|WP_068680035.1\|4898331_4900077_+\|proline--tRNA-ligase	unknown	unknown	gnl\|CDD\|236405
NZ_LR594689.1\|WP_068680044.1\|4903943_4904270_-\|Grx4-family-monothiol-glutaredoxin	unknown	unknown	gnl\|CDD\|188046
NZ_LR594689.1\|WP_102906107.1\|4903214_4903712_-\|cupin-domain-containing-protein	unknown	unknown	gnl\|CDD\|380340
NZ_LR594689.1\|WP_068680048.1\|4905150_4906239_-\|peptide-chain-release-factor-1	unknown	unknown	gnl\|CDD\|234801
NZ_LR594689.1\|WP_068680037.1\|4900073_4900712_+\|lytic-transglycosylase-domain-containing-protein	unknown	unknown	gnl\|CDD\|381594
NZ_LR594689.1\|WP_068680033.1\|4897541_4898201_-\|RNA-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|234820
NZ_LR594689.1\|WP_068680052.1\|4907679_4907958_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594689.1\|WP_068680060.1\|4913172_4914054_-\|sn-glycerol-3-phosphate-ABC-transporter-permease-UgpA	unknown	unknown	gnl\|CDD\|182550
NZ_LR594689.1\|WP_068680038.1\|4900729_4902043_-\|HlyC/CorC-family-transporter	unknown	unknown	gnl\|CDD\|224173

Protein	Function_ID	Function_description	E-value
NZ_LR594689.1\|WP_068680055.1\|4911230_4912238_-\|sn-glycerol-3-phosphate-import-ATP-binding-protein-UgpC	gnl\|CDD\|236947	PRK11650, ugpC, sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC.	0
NZ_LR594689.1\|WP_068680031.1\|4896997_4897555_-\|CNP1-like-family-protein	gnl\|CDD\|378041	pfam08750, CNP1, CNP1-like family. This family of proteins are likely to be lipoproteins. CNP1 (cryptic neisserial protein) has been expressed in E. coli and shown to be localized periplasmicly.	8.40404e-41
NZ_LR594689.1\|WP_068680025.1\|4894467_4894725_+\|50S-ribosomal-protein-L27	gnl\|CDD\|235464	PRK05435, rpmA, 50S ribosomal protein L27; Validated.	1.6966e-49
NZ_LR594689.1\|WP_068680050.1\|4906326_4907598_-\|glutamyl-tRNA-reductase	gnl\|CDD\|234592	PRK00045, hemA, glutamyl-tRNA reductase; Reviewed.	0
NZ_LR594689.1\|WP_068680054.1\|4910493_4911234_-\|glycerophosphodiester-phosphodiesterase	gnl\|CDD\|236524	PRK09454, ugpQ, cytoplasmic glycerophosphodiester phosphodiesterase; Provisional.	1.033e-116
NZ_LR594689.1\|WP_068680058.1\|4912260_4913109_-\|sn-glycerol-3-phosphate-ABC-transporter-permease-UgpE	gnl\|CDD\|182875	PRK10973, PRK10973, sn-glycerol-3-phosphate ABC transporter permease UgpE.	1.14574e-135
NZ_LR594689.1\|WP_068680046.1\|4904299_4905154_-\|peptide-chain-release-factor-N(5)-glutamine-methyltransferase	gnl\|CDD\|236467	PRK09328, PRK09328, N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional.	5.75553e-120
NZ_LR594689.1\|WP_068680029.1\|4895862_4896993_+\|glutamate-5-kinase	gnl\|CDD\|235460	PRK05429, PRK05429, gamma-glutamyl kinase; Provisional.	0
NZ_LR594689.1\|WP_102906105.1\|4907974_4910377_-\|mechanosensitive-ion-channel-family-protein	gnl\|CDD\|225803	COG3264, COG3264, Small-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane].	7.19104e-121
NZ_LR594689.1\|WP_068680040.1\|4902109_4903117_-\|AAA-family-ATPase	gnl\|CDD\|273258	TIGR00763, Lon_protease, endopeptidase La. This protein, the ATP-dependent serine endopeptidase La, is induced by heat shock and other stresses in E. coli, B. subtilis, and other species. The yeast member, designated PIM1, is located in the mitochondrial matrix, required for mitochondrial function, and also induced by heat shock. [Protein fate, Degradation of proteins, peptides, and glycopeptides].	1.68984e-31
NZ_LR594689.1\|WP_068680028.1\|4894793_4895846_+\|GTPase-ObgE	gnl\|CDD\|237048	PRK12299, obgE, GTPase CgtA; Reviewed.	0
NZ_LR594689.1\|WP_068680035.1\|4898331_4900077_+\|proline--tRNA-ligase	gnl\|CDD\|236405	PRK09194, PRK09194, prolyl-tRNA synthetase; Provisional.	0
NZ_LR594689.1\|WP_068680044.1\|4903943_4904270_-\|Grx4-family-monothiol-glutaredoxin	gnl\|CDD\|188046	TIGR00365, TIGR00365, monothiol glutaredoxin, Grx4 family. The gene for the member of this glutaredoxin family in E. coli, originally designated ydhD, is now designated grxD. Its protein, Grx4, is a monothiol glutaredoxin similar to Grx5 of yeast, which is involved in iron-sulfur cluster formation. [Energy metabolism, Electron transport].	1.04882e-64
NZ_LR594689.1\|WP_102906107.1\|4903214_4903712_-\|cupin-domain-containing-protein	gnl\|CDD\|380340	cd02210, cupin_BLR2406-like, Bradyrhizobium japonicum BLR2406 and related proteins, cupin domain. This family includes bacterial and fungal proteins homologous to BLR2406, a Bradyrhizobium japonicum protein of unknown function with a cupin beta barrel domain. Proteins in this subfamily appear to align closest to RmlC carbohydrate epimerase which is involved in dTDP-L-rhamnose production, and belong to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold capable of homodimerization.	1.11006e-50
NZ_LR594689.1\|WP_068680048.1\|4905150_4906239_-\|peptide-chain-release-factor-1	gnl\|CDD\|234801	PRK00591, prfA, peptide chain release factor 1; Validated.	0
NZ_LR594689.1\|WP_068680037.1\|4900073_4900712_+\|lytic-transglycosylase-domain-containing-protein	gnl\|CDD\|381594	cd00254, LT-like, lytic transglycosylase(LT)-like domain. Members include the soluble and insoluble membrane-bound LTs in bacteria and LTs in bacteriophage lambda. LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue.	1.96351e-25
NZ_LR594689.1\|WP_068680033.1\|4897541_4898201_-\|RNA-pyrophosphohydrolase	gnl\|CDD\|234820	PRK00714, PRK00714, RNA pyrophosphohydrolase; Reviewed.	1.3057e-97
NZ_LR594689.1\|WP_068680060.1\|4913172_4914054_-\|sn-glycerol-3-phosphate-ABC-transporter-permease-UgpA	gnl\|CDD\|182550	PRK10561, PRK10561, sn-glycerol-3-phosphate ABC transporter permease UgpA.	7.16663e-120
NZ_LR594689.1\|WP_068680038.1\|4900729_4902043_-\|HlyC/CorC-family-transporter	gnl\|CDD\|224173	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only].	1.01887e-133

>NZ_LR594689.1|WP_102906107.1|4903214_4903712_-|cupin-domain-containing-protein
MVSHEHSDHDHNDAAWKHDGVRVIHGNQLDANTAQTPGMNRAAAINFARVGAQKLWAGTVTIHPDAKTGAHHHGHLESVIYVVRGRARMRWGEHLEFTAEAGEGDFIYVPPYVPHQEINASPTEPLECVLCRSDGEAVAINLDIEPVEKPESVLWVDPTHPQGGV
>NZ_LR594689.1|WP_068680040.1|4902109_4903117_-|AAA-family-ATPase
MDSRPSRELAPASASSFQLPVAHLRSVFRTHDVERKLAKLPDRDHEHLRTTYERMLERGPERFQVKPSGVPQMAALYAELPNFAEVLDDVRRHVALAQDSRDGLEVTPMLLLGPPGIGKTHFARRLAELLGTGMSLVPMSSMTAGWLLSGASSQWKGAKPGKVFEALVDGQYANPVMVIDEIDKAGADVQYDPLGALYGLLEHDTAHAFVDEFAEVPIDASQVIWVTTANDVRGIPEPILNRMNVFEIDAPSPEAARQIASQLYASIRNAHDWGRLLAEEPQDDVLDHLATLAPREMRRALMTGFGNARLAGRGEVRVEDLPRAGPGRSRIGFVQ
>NZ_LR594689.1|WP_068680038.1|4900729_4902043_-|HlyC/CorC-family-transporter
MTLTQSLFIIAILIATSAFFSLAEISLAASRRLRLRQMADEGDARAERVLRIQEQPGHYFTVVQIGLNAVAILGGVVGEGSLSPYFARLFALWLTAETAQTAAFLASFVTIIAVFLVFADLFPKRLGMNDPERLAMRMVGPMQLLITVLKPLVWLFTTCTDLLFKLLGMPMQRDDKITSADILAMTEAGARAGILAVREQQVIANVFELDTRLVSSVMTSRDRIAWFQKDDPEAVLRARIVAEPYSAYPVCEGDIDHVLGYVDAKDMFQRVLSGQPLSFGQGLPLHKALIIPDRLSLTEVLEQFQQAHEDFAIIVNEYALVVGVITLNDVMSTVMGDLVGMQDEEQQIVRRDENSWLIDGVTPIQDVQRALDIDELPHAEEYETLAGFLMVMLRRVPKRTDSVSWGGFTFEVMDVDSHRIDQVMVTRGGAVAATPAA
>NZ_LR594689.1|WP_068680037.1|4900073_4900712_+|lytic-transglycosylase-domain-containing-protein
MSLSRRSCLLAGATAAALPLWPGVAHAGAQIEEPLIDSVRNALSASIRSSAPPKPEFSDTASRLAYLRWLGEMSERLKKKIPGHQERIEFLQTVWYESKRAGLEVSLVLGLIQVESNFRKFAVSSAGARGLMQVMPFWTRVIGNGDSSTLFRMQTNLRFGCVILRHYLDREAGDLFMTLGRYNGSRGKAPYPNAVFSNQRLWIFNDRRDDRG
>NZ_LR594689.1|WP_068680035.1|4898331_4900077_+|proline--tRNA-ligase
MKASRFFISTLKEAPADAEVASHRLMMRAGMIKKLGTGIYTYMPMGLRVIRKVEAIVREEMNRAGAVELTMPVVQPAELWEESGRFQAYGPELLRIKDRHERGFVVQPTSEEVITDIARQEIRSYKQLPKNFYQIQTKFRDERRPRFGLMRGREFIMKDAYSFDRDLGSAKASYKVMADAYRRIFDRFGLRYRAVAADSGAIGGDLSQEFQVIAATGEDAIVYCPGSDYAANMEKAEALAPAGPRPAAAQPLAKTPTPGKATCEEVAELLGVPLSTTVKSLVLATDRLGADGRVEGSQVWLLLVRGDHEMNEIKVSKVPGLDEGFRFATSAEIDEHFGCKPGYLGPLGLKQPVKLVADREVAVMADWITGANEVDFHMTGVNWGRDLPEPDLVADIRNVVAGDLSPDGKGVLAIERGIEIGHVFVLGTKYSKPMNATFLDEAGKPQFLEMGCYGIGVTRLPAAAIEQNNDERGIIWPDAIAPFTVVLCPIGMDRSAEVKQAAEALYEELLAAGVDVLLDDRGERPGAMFADWELIGVPHRVVISDRGIKEGQYEYQHRRDTAATKVPSSGVAEFVKSKLVA
>NZ_LR594689.1|WP_068680033.1|4897541_4898201_-|RNA-pyrophosphohydrolase
MLDRDGFRPNVGIILLNQKNQVFWGKRIRTHSWQFPQGGIDRGESPEQAMFRELHEEVGLQPEHVRIVARTRDWLRYEVPDRFIRRDARGHYKGQKQIWYLLQLIGHDWDLNLRATDHPEFDAWRWHDYWVPLDVVVEFKRGVYEMALTELARYLPRQDFRNRFLRSNVRAREFERHPPGPGHEPTFELPPGASFDPNPNAPHPAPDPSSTNDPLHAQR
>NZ_LR594689.1|WP_068680031.1|4896997_4897555_-|CNP1-like-family-protein
MRSARPALVLVLVGALAACGSTARDTDNPDWAQAGMPPPPKITAQADEWKEAEVPPPPAFNENRLMQIEMPPYSSLKFGVDPATLSLTGDGVVRYVVVATSKTGGGGTNAFYEGIRCASEEVKQYARYSQGAWQLVKAPEWKRINDRNSRYAKELALQGVCRGHAPRASVREMLLQMKDPLREIR
>NZ_LR594689.1|WP_068680029.1|4895862_4896993_+|glutamate-5-kinase
MTTSTVLRDARRLVVKVGSSLVTNEGRGLDDPAIGEWCRQLAALVRDGREVVMVSSGAIAEGMKRLGWRTRPHEVHELQAAAAVGQMGLAQIYETKLRENGLGSAQVLLTHADLADRERYLNARSTLVTLLALGVVPVINENDTVVNDEIKFGDNDTLGALVANLVEADALVILTDQKGLYTADPRKDPDARFVHEAAAGDPALEAMAGGAGSSIGRGGMITKILAAKRAAGSGASTVIAWGREPDALLRLSRGESIGTLLVAQTAKHQARKRWMADHLQLRGSVTVDAGAAAKVRGEGKSLLPIGMTGVEGEFSRGDVIAVKDAAGVELARGLANYSSAEARLLCRKPSAEFERLLGYVAESEMVHRDNMVLMPG
>NZ_LR594689.1|WP_068680028.1|4894793_4895846_+|GTPase-ObgE
MKFVDEAFIDIAAGDGGNGCVSFRHEKYKEFGGPDGGDGGRGGHIFAVADPNLNTLVDFRFSRRHEARRGQHGMGSDMFGAAGDDITLKMPVGTIISDAETGEVLFELLTPGETIIIAKGGDGGFGNLRYKSAINRAPRQKTPGWPGERKSLKLELKVLADVGLLGMPNAGKSTLISAVSNARPRIADYPFTTLHPNLGVVRVGPEQSFVVADLPGLIEGASEGAGLGHQFLRHLQRTRLLLHVVDLAPFDDTDPVAQAKAIVGELKKYDAALYEKPRWLVLNKLDMIPPEERAAKVKDFVKRLRFKGPVFEISALTREGCEPLVKAVYQHVKAQQVAEQPPTEIDPRFA
>NZ_LR594689.1|WP_068680025.1|4894467_4894725_+|50S-ribosomal-protein-L27
MAQKKGGGSTRNGRDSKPKMLGVKAFGGELISAGSIIVRQRGTQFHPGTNVGVGKDHTLFALVDGHVSFGTKGALNKHTVSVTPA
>NZ_LR594689.1|WP_068680044.1|4903943_4904270_-|Grx4-family-monothiol-glutaredoxin
MSEVQQRIDDLVKTNDLVLFMKGNASFPMCGFSGRAIQILKAVGVDTRTLKTVNVLEDEGIRQGIKEYSNWPTIPQLYVKGEFVGGSDILMEMYESGELQQMLNGSPA
>NZ_LR594689.1|WP_068680046.1|4904299_4905154_-|peptide-chain-release-factor-N(5)-glutamine-methyltransferase
MTSKDGQSPSTAAQMLAAAAALGVERLDAQLLLLHVLGRPSGDRAWLLAHDTDILPDAVWPPFAGLCARRVAGEPVAYLVGQKEFYGLGLQVDARVLVPRPDTETLVAWALQCLQGRTSPVVLDLGTGSGAIALAIQHARPDAKVTAVDRSAGALAVARANAKHLGLAVRFAEADWLEGADTDLDLVVSNPPYVAAGDPHLTALRHEPLGALVSGADGLDDIRRIVEAAPAHLRVGGWLLLEHGHDQAASVRALLARHGFAEVQSRDDLAGIARCSGGIWRTVK
>NZ_LR594689.1|WP_068680048.1|4905150_4906239_-|peptide-chain-release-factor-1
MKPFLRHQLERYAQRLGELDFLLSREDIMSDMTQYRNISREHAEVTQVAGRYQRYLQRESDLAAAREMQDDPDMAEMAREEIASAEAELISLEDELQRLLLPKDPEDARNAFLEIRAGTGGDESALFAGDLLRMYTRHAERAGWRCEIVSASESELGGFKEVVMRVVGDEVFGRLRFESGGHRVQRVPATETQGRIHTSACTVAVLAEPDEAQAVQINPADLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVAECQDDRSQHRNKAKALQVLSARIQEKERSERAAKDVALRKGLIGSGDRSDRIRTYNFPQGRLTDHRINLTLYKLQTIMEGDLGEVLDALRAAREAEKLAELEASLPA
>NZ_LR594689.1|WP_068680050.1|4906326_4907598_-|glutamyl-tRNA-reductase
MSVWALGLNHTTAPLDLRGRFAFAIDQIAPTLQSLRSSFSTHRHPDVEAAIISTCNRTEIYCAADHMALDHTVDWLAQSGGVAPALLRSHAYALHDDKAARHAFRVASGLDSMVLGEAQILGQIKDAVRAAETAGALGSTLNQLFQRSFAVAKEVRTATEIGAHSISMAAAAVRLAAQLFEDMKETRVLFVGAGEMIDLAATHFAAREPKSIVIANRTLERGEKLASRFGGEAMRLAELPARLAEFDIVVSCTASTLPLIGLGAVERALKLRKHRPMFMVDLAVPRDIEVEVKALEDIYLYTVDDLAQVVQQGHASRQAAVAEAEVIIDAGVRSFMHWLDQRGSVPLIQQLNAQADEWRAAELGRARKLLAKGEPVEAVLEALSRGLTQKMLHGAMAELHAGDAAAREHTAQAISRLFLRKER
>NZ_LR594689.1|WP_068680052.1|4907679_4907958_+|hypothetical-protein
MSALDLLIHLLNFAAPAFCVALLLAILFRLAMHGRSVAVSLWVQVAVTFAAGLAVLVAGLVYFGHDGRIATYAALVVVCGTTQWWLLRGWRG
>NZ_LR594689.1|WP_102906105.1|4907974_4910377_-|mechanosensitive-ion-channel-family-protein
MPRLAALLLAAVLGSAVLAQDGAAPPEPTVAALRTQLDGIPSSVESNAQVRELLGRINAIGSQADKFVASRTGQLSDLNARLGELGNPPAAGAPPEDPDITRQRAALLKERNTLDADIRLARLITVDAQQRGSELLSKRRKLFEAQLTERAPSPLGRQFWFDISDAWPADLERLASLRTELRGAVETAMDPAHRVSVLASLAAALLLALLGNWAAEHGLVRLAARVLPGGRLRRSLLVIAVVGVNVLLVALAAQGVFATLDRHGILGPQIRKLGQAVVQSIIFIAFVVGLGRALLSNKRPSWRLPPIPDTMARRLAPFPWLTAVIGVLVWVPSQVNAIVDASFAAVVATHVVTALALTALIGMMLLRLHEPAVPAPDGTATAEAGEPPPGEPERPLWISFLLSAVALAVIVIWVLVGIGYVALASFLANQLTWSGIVASAFYLLFKFADDLFMATVASKSELGQKLQKSFGFAPRTLDQAAVVLSGLARVALFFYLLIALATPLGTGPGEVFQRSGQFGTGLKIGEFQLVPGAIFSAVAVLAVGFVALRVFKKWLEARYLPETALEPGMQSSITTLLGYVGGAVVIAIGLSALGIGIERIAWVASALSVGIGFGLQAIVQNFISGLILLAERPVKVGDWVVLGTAEGDVRRINVRATEIQLADRSTLIVPNSEFITKTVRNMTLTNAEGRVLIRLPMPLSTDAKLTRELMLSACADHGGVLVAPAPSVTLEGIEGGMLIFQAIAFVQSPRLAGGVRSDVLFAMLDRFKEAGLPLAAPAVAAPQGTTPAPAPAPPVPPLAQ
>NZ_LR594689.1|WP_068680054.1|4910493_4911234_-|glycerophosphodiester-phosphodiesterase
MKAWPYPFWIAHRGAGRLAPENTLAAFRLGAEHGYRMFECDAKLSADEVPFLLHDSTLERTTNGRGVAGEHSWSALAQLDAGAWHSRRYAGEPLPTLEALIRFCLANRHLIDIEIKPTPGVERRTGELVAQVAAKLWAGADLPPPLLTSFSPESLEGALATEPGLPRGLLLDTLWEGWLDTARRLECAAIVCNYALWDATTVAQVHAAGMRALSYTVNDASVARWLAGLGTDGIVTDRVDRFSPAA
>NZ_LR594689.1|WP_068680055.1|4911230_4912238_-|sn-glycerol-3-phosphate-import-ATP-binding-protein-UgpC
MAAISLRNVIKRYGHGAKANQVIHGVSADVKDGEFVVIVGPSGCGKSTLLRMVAGLEEISAGEIAIGNRVVNDIEPARRDIAMVFQNYALYPHMSNFDNMAYGLKIAKVPKEEIKARVDKAAKILELGHLLDRKPRELSGGQRQRVAMGRAIVRQPQVFLFDEPLSNLDAKLRAQTRLEIQKLHRELGITSLFVTHDQVEAMTLAQRIIVMNAGVMDQFGTPEEVYARPATTFVASFIGSPPMNLLKHAPGVRHGMILGVRPEHLTLDTDGWSVQVEYVELLGAERLIYGRVGDEQLVVRADEGQPAPVAGDTVKIAARQDKLHWFDAGSGKRAA
>NZ_LR594689.1|WP_068680058.1|4912260_4913109_-|sn-glycerol-3-phosphate-ABC-transporter-permease-UgpE
MVERRPGLTVLSHVVLILGIAIVAFPIYLAFVASTHTRDAILQVPMPLVPGGHMFENYSAALLGADTQGARVVVGRMMWISLVTALVISIGKIAISLLSAFAIVYFRFPFKKIVFWMIFVTLMLPVEVRILPTYKVLADLNMLNTYAGLTVPLIASATATFLFRQFFLSVPDELVEAARMDGAGPMRFFKDILVPLSQTSIAALFVIQFIYGWNQYLWPLLATTSEDMYPVVIGIKRMIASGDAAVDWNLVMATAILALVPPVIVVVLMQRWFVKGLVDTEK
>NZ_LR594689.1|WP_068680060.1|4913172_4914054_-|sn-glycerol-3-phosphate-ABC-transporter-permease-UgpA
MEKRVLFRSAWLPWLLVAPQMAVILVFFFWPASQAIWQSLQSEDAFGTSTAFVGLENFEVLFDDPAYVESFKVTALFSVLVAGSGIALSLMLAIFADRILRGGLVYKTFLIIPYAVAPAIAGVLWVFMFSPSIGVVSYFLRHIGVDWNHLLNSNQALTLIVVAAVWKQISYNFLFFLAGLQSIPKALIEAASIDGAGPLRRFATIQFPLLSPTTFFLLVINIVYAFFDTFAIVHATTEGGPGRDTAILVYKVWHDGFKALDLGGSAAQSVVLMVIVIGLTVIQFRYVEKKVQY

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_LR594689_1	1.1\|3876800\|42\|NZ_LR594689\|CRISPRCasFinder	3876800-3876841	42	NZ_LR594689.1	3874354-3874395	0	1.0
NZ_LR594689_1	1.1\|3876800\|42\|NZ_LR594689\|CRISPRCasFinder	3876800-3876841	42	NZ_LR594689.1	4499106-4499147	0	1.0
NZ_LR594689_1	1.1\|3876800\|42\|NZ_LR594689\|CRISPRCasFinder	3876800-3876841	42	NZ_LR594689.1	2577651-2577692	0	1.0
NZ_LR594689_1	1.1\|3876800\|42\|NZ_LR594689\|CRISPRCasFinder	3876800-3876841	42	NZ_LR594689.1	2577747-2577788	0	1.0
NZ_LR594689_1	1.1\|3876800\|42\|NZ_LR594689\|CRISPRCasFinder	3876800-3876841	42	NZ_LR594689.1	5326582-5326623	1	0.976
NZ_LR594689_1	1.1\|3876800\|42\|NZ_LR594689\|CRISPRCasFinder	3876800-3876841	42	NZ_LR594689.1	5401262-5401303	1	0.976
NZ_LR594689_1	1.1\|3876800\|42\|NZ_LR594689\|CRISPRCasFinder	3876800-3876841	42	NZ_LR594689.1	5401358-5401399	1	0.976
NZ_LR594689_1	1.1\|3876800\|42\|NZ_LR594689\|CRISPRCasFinder	3876800-3876841	42	NZ_LR594689.1	4004149-4004190	2	0.952
NZ_LR594689_1	1.1\|3876800\|42\|NZ_LR594689\|CRISPRCasFinder	3876800-3876841	42	NZ_LR594689.1	4004245-4004286	2	0.952
NZ_LR594689_1	1.1\|3876800\|42\|NZ_LR594689\|CRISPRCasFinder	3876800-3876841	42	NZ_LR594689.1	4004341-4004382	2	0.952

1. spacer 1.1|3876800|42|NZ_LR594689|CRISPRCasFinder matches to position: 3874354-3874395, mismatch: 0, identity: 1.0

cgagcaacatccccaccgcggaaccggctttgccgggccgct	CRISPR spacer
cgagcaacatccccaccgcggaaccggctttgccgggccgct	Protospacer
******************************************

2. spacer 1.1|3876800|42|NZ_LR594689|CRISPRCasFinder matches to position: 4499106-4499147, mismatch: 0, identity: 1.0

cgagcaacatccccaccgcggaaccggctttgccgggccgct	CRISPR spacer
cgagcaacatccccaccgcggaaccggctttgccgggccgct	Protospacer
******************************************

3. spacer 1.1|3876800|42|NZ_LR594689|CRISPRCasFinder matches to position: 2577651-2577692, mismatch: 0, identity: 1.0

cgagcaacatccccaccgcggaaccggctttgccgggccgct	CRISPR spacer
cgagcaacatccccaccgcggaaccggctttgccgggccgct	Protospacer
******************************************

4. spacer 1.1|3876800|42|NZ_LR594689|CRISPRCasFinder matches to position: 2577747-2577788, mismatch: 0, identity: 1.0

cgagcaacatccccaccgcggaaccggctttgccgggccgct	CRISPR spacer
cgagcaacatccccaccgcggaaccggctttgccgggccgct	Protospacer
******************************************

5. spacer 1.1|3876800|42|NZ_LR594689|CRISPRCasFinder matches to position: 5326582-5326623, mismatch: 1, identity: 0.976

cgagcaacatccccaccgcggaaccggctttgccgggccgct	CRISPR spacer
cgagcaacatccccaccgcgcaaccggctttgccgggccgct	Protospacer
******************** *********************

6. spacer 1.1|3876800|42|NZ_LR594689|CRISPRCasFinder matches to position: 5401262-5401303, mismatch: 1, identity: 0.976

cgagcaacatccccaccgcggaaccggctttgccgggccgct	CRISPR spacer
cgagcaacatgcccaccgcggaaccggctttgccgggccgct	Protospacer
********** *******************************

7. spacer 1.1|3876800|42|NZ_LR594689|CRISPRCasFinder matches to position: 5401358-5401399, mismatch: 1, identity: 0.976

cgagcaacatccccaccgcggaaccggctttgccgggccgct	CRISPR spacer
cgagcaacatgcccaccgcggaaccggctttgccgggccgct	Protospacer
********** *******************************

8. spacer 1.1|3876800|42|NZ_LR594689|CRISPRCasFinder matches to position: 4004149-4004190, mismatch: 2, identity: 0.952

cgagcaacatccccaccgcggaaccggctttgccgggccgct	CRISPR spacer
cgagcaacatttccaccgcggaaccggctttgccgggccgct	Protospacer
**********..******************************

9. spacer 1.1|3876800|42|NZ_LR594689|CRISPRCasFinder matches to position: 4004245-4004286, mismatch: 2, identity: 0.952

cgagcaacatccccaccgcggaaccggctttgccgggccgct	CRISPR spacer
cgagcaacatttccaccgcggaaccggctttgccgggccgct	Protospacer
**********..******************************

10. spacer 1.1|3876800|42|NZ_LR594689|CRISPRCasFinder matches to position: 4004341-4004382, mismatch: 2, identity: 0.952

cgagcaacatccccaccgcggaaccggctttgccgggccgct	CRISPR spacer
cgagcaacatttccaccgcggaaccggctttgccgggccgct	Protospacer
**********..******************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

630458 : 719414

115

Pseudomonas_phage(16.67%)

portal,terminase,integrase,plate,tail,transposase,head,capsid

attL 662983:663031|attR 719547:719595

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_102905407.1\|630458_631442_+\|transposase	IS5 family transposase	E5E3P6	Burkholderia_phage	2.5e-110	64.5
WP_068678569.1\|631644_632559_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_068678567.1\|632587_633592_-	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_068678565.1\|633588_634620_-	cobalamin biosynthesis protein CobD	NA	NA	NA	NA
WP_068678563.1\|634621_635191_-	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA
WP_068678561.1\|635210_635981_-	ABC transporter ATP-binding protein	M1HXU1	Acanthocystis_turfacea_Chlorella_virus	1.9e-09	29.9
WP_068678560.1\|635977_636985_-	iron ABC transporter permease	NA	NA	NA	NA
WP_068678558.1\|636981_637890_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_068678586.1\|637886_638456_-	bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase	NA	NA	NA	NA
WP_102905491.1\|638452_640339_-	TonB-dependent receptor	A0A0P0I887	Acinetobacter_phage	3.1e-08	31.2
WP_068678556.1\|640699_640927_+	cell division protein ZapB	NA	NA	NA	NA
WP_068678554.1\|640926_641280_+	cell division protein ZapA	NA	NA	NA	NA
WP_068678552.1\|641567_642383_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
WP_068678550.1\|642492_642918_+	universal stress protein	NA	NA	NA	NA
WP_068678548.1\|642966_643923_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_068678582.1\|644089_645139_+	carbon-nitrogen hydrolase family protein	NA	NA	NA	NA
WP_068678545.1\|645154_646213_+	phenylacetaldoxime dehydratase family protein	NA	NA	NA	NA
WP_068678543.1\|646215_647760_-	malonyl-CoA synthase	A0A2H4PQM9	Staphylococcus_phage	9.5e-32	26.7
WP_068678541.1\|647772_648534_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
WP_068678538.1\|648530_649520_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_102905403.1\|649593_651060_-	malonyl-CoA decarboxylase	NA	NA	NA	NA
WP_068678536.1\|651056_651725_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_146039346.1\|651908_652298_+	hypothetical protein	NA	NA	NA	NA
WP_146039345.1\|652366_653662_+	hypothetical protein	NA	NA	NA	NA
WP_068678532.1\|653697_654531_-	prolipoprotein diacylglyceryl transferase	NA	NA	NA	NA
WP_102905401.1\|654591_655533_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_068678530.1\|655633_657328_+	dihydroxy-acid dehydratase	NA	NA	NA	NA
WP_102905399.1\|657583_658903_+	cytosine permease	NA	NA	NA	NA
WP_068678528.1\|658847_659693_-	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA
WP_083944431.1\|659743_660910_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_068678526.1\|660906_661104_+	sulfur carrier protein ThiS	NA	NA	NA	NA
WP_068678578.1\|661127_661943_+	thiazole synthase	NA	NA	NA	NA
WP_102905397.1\|661948_662872_+	thiamine phosphate synthase	NA	NA	NA	NA
662983:663031	attL	NA	NA	NA	NA
WP_068678525.1\|663133_664066_+	hypothetical protein	NA	NA	NA	NA
WP_068678574.1\|664085_664682_-	hypothetical protein	A0A068CDF3	Rhizobium_phage	5.1e-18	33.7
WP_146039343.1\|664796_665066_+	hypothetical protein	NA	NA	NA	NA
WP_068678520.1\|665307_667158_+	hypothetical protein	NA	NA	NA	NA
WP_068678518.1\|667214_667487_-	hypothetical protein	NA	NA	NA	NA
WP_068678516.1\|667483_667843_-	hypothetical protein	NA	NA	NA	NA
WP_157103422.1\|667839_668013_-	hypothetical protein	NA	NA	NA	NA
WP_068678512.1\|668053_668674_-	glycoside hydrolase family 19 protein	A0A0A8J8P3	Ralstonia_phage	3.7e-27	45.7
WP_068678510.1\|668670_668943_-	hypothetical protein	NA	NA	NA	NA
WP_068678509.1\|669008_669278_-	hypothetical protein	NA	NA	NA	NA
WP_083944430.1\|669277_669820_-\|tail	tail fiber assembly protein	B5TK80	Pseudomonas_phage	2.9e-12	56.2
WP_068678507.1\|669816_670689_-	hypothetical protein	NA	NA	NA	NA
WP_068678505.1\|670700_671297_-	DUF2313 domain-containing protein	NA	NA	NA	NA
WP_068678503.1\|671299_672427_-\|plate	baseplate J/gp47 family protein	B5TAA9	Burkholderia_phage	3.7e-17	28.9
WP_068678502.1\|672426_672873_-	phage GP46 family protein	A0A0C4UR04	Shigella_phage	6.3e-29	46.3
WP_068678500.1\|672869_673544_-\|plate	phage baseplate assembly protein V	Q8SBG6	Shigella_phage	5.8e-18	35.0
WP_068678498.1\|673540_674641_-	hypothetical protein	A0A192Y7L7	Salmonella_phage	7.7e-44	33.6
WP_083944429.1\|674651_675215_-	hypothetical protein	A0A2P9JZK2	Alteromonadaceae_phage	2.5e-06	42.9
WP_083944428.1\|675211_676087_-	DNA circularization N-terminal domain-containing protein	Q8W619	Enterobacteria_phage	2.5e-21	39.6
WP_068678496.1\|676099_677953_-	hypothetical protein	Q4L1H3	Burkholderia_phage	3.2e-10	23.0
WP_068678494.1\|678059_678347_-\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_068678492.1\|678343_678712_-\|tail	phage tail tube protein	NA	NA	NA	NA
WP_068678490.1\|678742_680227_-\|tail	phage tail sheath subtilisin-like domain-containing protein	S5FKL0	Shigella_phage	2.8e-97	42.4
WP_068678489.1\|680288_680480_-	DUF2635 domain-containing protein	B5TK66	Pseudomonas_phage	8.4e-07	54.7
WP_068678487.1\|680490_681150_-	hypothetical protein	NA	NA	NA	NA
WP_102905487.1\|681149_681470_-	hypothetical protein	NA	NA	NA	NA
WP_068678485.1\|681466_682513_-\|capsid	major capsid protein	A0A0A8ILA9	Aurantimonas_phage	1.7e-56	38.3
WP_068678483.1\|682584_683511_-\|head	head decoration protein	NA	NA	NA	NA
WP_068678481.1\|683538_684168_-	hypothetical protein	NA	NA	NA	NA
WP_068678479.1\|684191_685067_-	S49 family peptidase	A0A2D1GN02	Marinobacter_phage	2.1e-52	44.5
WP_068678478.1\|685077_686733_-\|portal	phage portal protein	A0A291AUL8	Sinorhizobium_phage	5.3e-81	34.4
WP_068678476.1\|686732_687005_-	hypothetical protein	NA	NA	NA	NA
WP_068678474.1\|687004_687205_-	hypothetical protein	NA	NA	NA	NA
WP_068678472.1\|687214_689323_-\|terminase	phage terminase large subunit family protein	K4I457	Providencia_phage	5.9e-77	30.8
WP_068678469.1\|689319_689901_-	hypothetical protein	NA	NA	NA	NA
WP_068678467.1\|690141_690765_-	hypothetical protein	NA	NA	NA	NA
WP_068678465.1\|690764_691127_-	hypothetical protein	NA	NA	NA	NA
WP_068678463.1\|691126_691774_-	hypothetical protein	NA	NA	NA	NA
WP_068678461.1\|691777_693421_-	hypothetical protein	NA	NA	NA	NA
WP_146039342.1\|694616_695315_-	hypothetical protein	NA	NA	NA	NA
WP_157103420.1\|695353_695530_-	hypothetical protein	NA	NA	NA	NA
WP_068678571.1\|695526_696039_-	hypothetical protein	NA	NA	NA	NA
WP_068678457.1\|696071_696275_-	hypothetical protein	NA	NA	NA	NA
WP_068678455.1\|696271_696493_-	hypothetical protein	NA	NA	NA	NA
WP_068678453.1\|696489_696942_-	RusA family crossover junction endodeoxyribonuclease	NA	NA	NA	NA
WP_068678451.1\|696938_697475_-	hypothetical protein	NA	NA	NA	NA
WP_157103419.1\|697471_697621_-	hypothetical protein	NA	NA	NA	NA
WP_068678449.1\|697617_699066_-	replicative DNA helicase	O80281	Escherichia_phage	1.2e-76	36.5
WP_068678447.1\|699062_699992_-	hypothetical protein	NA	NA	NA	NA
WP_068678445.1\|699984_700212_-	hypothetical protein	NA	NA	NA	NA
WP_174262755.1\|700208_702833_-	DNA methylase N-4	R9TRS8	Rhizobium_phage	0.0e+00	64.8
WP_068678441.1\|702832_703120_-	hypothetical protein	NA	NA	NA	NA
WP_068678439.1\|703116_703533_-	transcriptional regulator	NA	NA	NA	NA
WP_068678437.1\|703611_703839_-	hypothetical protein	NA	NA	NA	NA
WP_068678435.1\|703842_704046_-	hypothetical protein	NA	NA	NA	NA
WP_068678433.1\|704046_704274_-	hypothetical protein	NA	NA	NA	NA
WP_068678431.1\|704350_704917_+	hypothetical protein	NA	NA	NA	NA
WP_162487101.1\|704984_705158_+	hypothetical protein	NA	NA	NA	NA
WP_068678427.1\|705384_705660_+	hypothetical protein	NA	NA	NA	NA
WP_068678426.1\|705763_706864_+	hypothetical protein	NA	NA	NA	NA
WP_146039340.1\|706866_707208_+	hypothetical protein	NA	NA	NA	NA
WP_068678422.1\|707204_707426_+	hypothetical protein	NA	NA	NA	NA
WP_068678420.1\|707422_707686_+	hypothetical protein	NA	NA	NA	NA
WP_068678418.1\|707682_707904_+	hypothetical protein	NA	NA	NA	NA
WP_157103418.1\|707915_708059_+	hypothetical protein	NA	NA	NA	NA
WP_068678417.1\|708067_708898_+	PD-(D/E)XK nuclease family protein	H2BD50	Pseudomonas_phage	2.7e-49	42.9
WP_068678416.1\|708925_710167_+	hypothetical protein	A0A2I7RZ22	Vibrio_phage	6.4e-23	33.5
WP_068678415.1\|710172_711930_+	AAA family ATPase	J7HXJ7	Pseudomonas_phage	1.4e-92	39.7
WP_068678414.1\|711926_712568_+	3'-5' exonuclease	I3PUZ1	Vibrio_phage	9.9e-44	46.7
WP_068678413.1\|712671_712896_+	hypothetical protein	NA	NA	NA	NA
WP_068678412.1\|713685_714603_+	DNA cytosine methyltransferase	A0A088FRI5	Mycobacterium_phage	7.3e-40	36.2
WP_146039339.1\|714605_714854_-	hypothetical protein	NA	NA	NA	NA
WP_068678408.1\|715701_715989_+	hypothetical protein	NA	NA	NA	NA
WP_068678407.1\|715985_716363_+	ASCH domain-containing protein	A0A291AUQ6	Sinorhizobium_phage	3.4e-28	48.8
WP_068678406.1\|716359_716878_+	DUF1643 domain-containing protein	A0A0U1W068	Pseudomonas_phage	2.6e-26	44.9
WP_068678405.1\|716874_717177_+	hypothetical protein	NA	NA	NA	NA
WP_068678404.1\|717173_717434_+	hypothetical protein	NA	NA	NA	NA
WP_068678403.1\|717430_717655_+	hypothetical protein	NA	NA	NA	NA
WP_068678402.1\|717651_717852_+	hypothetical protein	NA	NA	NA	NA
WP_068678399.1\|717848_718094_+	hypothetical protein	NA	NA	NA	NA
WP_068678398.1\|718090_718372_+	DUF4224 domain-containing protein	NA	NA	NA	NA
WP_068678396.1\|718346_719414_+\|integrase	tyrosine-type recombinase/integrase	H9C152	Pectobacterium_phage	2.5e-23	28.9
719547:719595	attR	NA	NA	NA	NA

DBSCAN-SWA_2

2145811 : 2201346

uncultured_virus(25.0%)

tRNA,transposase,integrase

attL 2183454:2183513|attR 2202229:2203590

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_068683592.1\|2145811_2146870_-\|tRNA	tRNA dihydrouridine synthase DusB	NA	NA	NA	NA
WP_068683510.1\|2147036_2147507_+	DedA family protein	NA	NA	NA	NA
WP_068683512.1\|2147557_2148649_-	redox-regulated ATPase YchF	NA	NA	NA	NA
WP_068683514.1\|2148706_2149591_-	MOSC N-terminal beta barrel domain-containing protein	NA	NA	NA	NA
WP_068683516.1\|2149659_2150769_+	FAD-dependent monooxygenase	NA	NA	NA	NA
WP_068683594.1\|2150848_2151568_+	DsbC family protein	NA	NA	NA	NA
WP_068683518.1\|2151567_2153361_+	M61 family metallopeptidase	NA	NA	NA	NA
WP_068683520.1\|2153408_2154188_+	enoyl-CoA hydratase	NA	NA	NA	NA
WP_068683522.1\|2154189_2155362_-	hypothetical protein	NA	NA	NA	NA
WP_102905667.1\|2155358_2155985_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_068683526.1\|2156160_2157702_+	VWA domain-containing protein	NA	NA	NA	NA
WP_146039401.1\|2157896_2158415_+	hypothetical protein	NA	NA	NA	NA
WP_083944692.1\|2158576_2158792_+	hypothetical protein	NA	NA	NA	NA
WP_068683530.1\|2158763_2160023_-	galactosyldiacylglycerol synthase	NA	NA	NA	NA
WP_068683532.1\|2160019_2160898_-	UDP-2,3-diacylglucosamine diphosphatase	A0A218MKA7	uncultured_virus	4.5e-63	45.6
WP_068683534.1\|2160986_2161943_-	CDF family Co(II)/Ni(II) efflux transporter DmeF	NA	NA	NA	NA
WP_068683536.1\|2161952_2163011_-	Holliday junction branch migration DNA helicase RuvB	B3GAM6	uncultured_virus	3.2e-07	29.1
WP_068683538.1\|2163189_2163624_+	hypothetical protein	NA	NA	NA	NA
WP_068683540.1\|2163685_2164258_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA
WP_068683542.1\|2164292_2165240_+	PhoH family protein	A0A0S0MVD6	Pseudomonas_phage	1.1e-46	44.0
WP_068683544.1\|2165239_2165692_+	rRNA maturation RNase YbeY	NA	NA	NA	NA
WP_068683546.1\|2165692_2166133_-\|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	NA	NA	NA	NA
WP_083944693.1\|2166129_2167149_-	cation transporter	NA	NA	NA	NA
WP_068683548.1\|2167186_2167687_+	FecR domain-containing protein	A0A2H4N810	Lake_Baikal_phage	5.4e-05	27.0
WP_068683550.1\|2167686_2168295_+	OmpA family protein	NA	NA	NA	NA
WP_068683552.1\|2168307_2169540_-\|tRNA	tyrosine--tRNA ligase	NA	NA	NA	NA
WP_068683554.1\|2169697_2171047_+	M23 family metallopeptidase	V5R8R0	Arthrobacter_phage	1.4e-18	41.4
WP_068683556.1\|2171065_2172181_+	anhydro-N-acetylmuramic acid kinase	NA	NA	NA	NA
WP_068683558.1\|2172246_2172612_-	iron-sulfur cluster insertion protein ErpA	A0A2H4N7M3	Lake_Baikal_phage	3.9e-29	57.0
WP_068683560.1\|2172743_2173136_-	30S ribosomal protein S9	NA	NA	NA	NA
WP_028249522.1\|2173148_2173580_-	50S ribosomal protein L13	NA	NA	NA	NA
WP_068683562.1\|2173766_2174669_+	23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ	NA	NA	NA	NA
WP_083944694.1\|2174689_2175373_-	septal ring lytic transglycosylase RlpA family protein	F5B3X9	Synechococcus_phage	2.6e-18	55.2
WP_068683564.1\|2175369_2176203_-	methylenetetrahydrofolate reductase [NAD(P)H]	NA	NA	NA	NA
WP_068683566.1\|2176180_2176978_-	TlyA family RNA methyltransferase	NA	NA	NA	NA
WP_068683569.1\|2176997_2178437_-	adenosylhomocysteinase	NA	NA	NA	NA
WP_068683570.1\|2178930_2180145_+\|integrase	site-specific integrase	A0A291AWU1	Escherichia_phage	2.3e-118	52.9
WP_068683574.1\|2180437_2180671_-	hypothetical protein	NA	NA	NA	NA
WP_068683576.1\|2180947_2181160_+	hypothetical protein	NA	NA	NA	NA
WP_068683580.1\|2181475_2182303_+	hypothetical protein	NA	NA	NA	NA
WP_083944555.1\|2182404_2182752_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_146039292.1\|2182727_2183081_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_102905223.1\|2183160_2184756_+\|transposase	IS66 family transposase	A0A218MNE7	uncultured_virus	1.7e-108	44.7
2183454:2183513	attL	NA	NA	NA	NA
WP_068676974.1\|2184819_2185194_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_068676975.1\|2185613_2185796_-	hypothetical protein	NA	NA	NA	NA
WP_083944294.1\|2186137_2186482_+	HigA family addiction module antidote protein	NA	NA	NA	NA
WP_068676978.1\|2189260_2190250_+	hypothetical protein	NA	NA	NA	NA
WP_102905131.1\|2192269_2193253_-\|transposase	IS5 family transposase	E5E3P6	Burkholderia_phage	4.2e-110	64.8
WP_068683777.1\|2194678_2195179_+	hypothetical protein	NA	NA	NA	NA
WP_083944555.1\|2197771_2198119_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_146039292.1\|2198094_2198448_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_068673442.1\|2198913_2199357_+\|transposase	transposase	NA	NA	NA	NA
WP_068673444.1\|2199332_2199686_+	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	5.1e-18	41.8
WP_102905039.1\|2199780_2201346_+\|transposase	IS66 family transposase	S5VTD3	Leptospira_phage	1.0e-70	37.6
2202229:2203590	attR	NA	NA	NA	NA

DBSCAN-SWA_3

2545493 : 2555194

Acinetobacter_phage(37.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_102905612.1\|2545493_2546687_-	elongation factor Tu	A0A1V0SLW6	Klosneuvirus	1.2e-13	28.7
WP_102905614.1\|2547300_2548005_-	uracil-DNA glycosylase	A0A2D1AFC0	Eptesicus_fuscus_gammaherpesvirus	1.4e-43	51.5
WP_068685901.1\|2548060_2548861_-	indole-3-glycerol phosphate synthase TrpC	A0A0P0IR83	Acinetobacter_phage	2.2e-56	50.2
WP_068685899.1\|2548874_2549900_-	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	2.4e-76	45.3
WP_068685895.1\|2550144_2551194_-	low-specificity L-threonine aldolase	NA	NA	NA	NA
WP_068685893.1\|2551198_2551783_-	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	3.2e-57	56.3
WP_068685891.1\|2551779_2552169_-	GxxExxY protein	A9YW17	Ostreococcus_tauri_virus	1.1e-05	29.0
WP_068685889.1\|2552168_2553671_-	anthranilate synthase component I	S4VT78	Pandoravirus	4.7e-36	29.7
WP_068685886.1\|2553914_2554421_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_068685880.1\|2554417_2555194_-	SDR family oxidoreductase	W8CYX9	Bacillus_phage	2.7e-11	43.4

DBSCAN-SWA_4

4120842 : 4127132

Enterobacteria_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_068680890.1\|4120842_4121904_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	2.4e-87	46.7
WP_068680892.1\|4121900_4122791_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	2.2e-25	33.6
WP_068680894.1\|4122813_4123701_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	2.2e-97	59.9
WP_068680896.1\|4123697_4124246_+	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	1.1e-54	57.2
WP_068680898.1\|4124242_4125328_+	CDP-glucose 4,6-dehydratase	A0A0P0YMS6	Yellowstone_lake_phycodnavirus	8.1e-22	26.2
WP_068680900.1\|4125324_4126155_+	NAD-dependent epimerase/dehydratase family protein	NA	NA	NA	NA
WP_068680903.1\|4126151_4127132_+	glycosyltransferase family 2 protein	A8CG95	Salmonella_phage	5.4e-41	34.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

4. NZ_LR594691

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_LR594691_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR594691_1

2411-2502

Orphan

Consensus_repeat	Method
TGAGGAACGGTTCCTCACCCCTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LR594691_1

>merge|NZ_LR594691|1|2411-2502|CRISPRCasFinder
TGAGGAACGGTTCCTCACCCCTTGTTCCGACTTCGCCGAGCTATCGGTCACCGGAAATGTAGGGGCGCATGAGGAACGGTTCCTCACCCCTT

>NZ_LR594691|1|1|2411-2502|CRISPRCasFinder
TGAGGAACGGTTCCTCACCCCTT	GTTCCGACTTCGCCGAGCTATCGGTCACCGGAAATGTAGGGGCGCA
TGAGGAACGGTTCCTCACCCCTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR594691.1\|WP_083944785.1\|11292_12099_+\|type-IV-secretory-system-conjugative-DNA-transfer-family-protein	unknown	unknown	gnl\|CDD\|374893
NZ_LR594691.1\|WP_068684720.1\|10944_11283_+\|DotD/TraH-family-lipoprotein	unknown	unknown	gnl\|CDD\|379881
NZ_LR594691.1\|WP_068684722.1\|8770_10654_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594691.1\|WP_068684726.1\|6424_6997_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237057
NZ_LR594691.1\|WP_068684730.1\|3212_3887_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594691.1\|WP_068684732.1\|1238_2264_+\|ParB/RepB/Spo0J-family-partition-protein	unknown	unknown	gnl\|CDD\|319262
NZ_LR594691.1\|WP_083944790.1\|78_1239_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|274585
NZ_LR594691.1\|WP_162487236.1\|13907_15203_-\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_LR594691.1\|WP_068684716.1\|12106_13393_+\|Flp-pilus-assembly-complex-ATPase-component-TadA	unknown	unknown	gnl\|CDD\|131576
NZ_LR594691.1\|WP_068684728.1\|4390_5812_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594691.1\|WP_068684714.1\|13389_13704_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377746
NZ_LR594691.1\|WP_068684724.1\|7008_8127_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274757

Protein	Function_ID	Function_description	E-value
NZ_LR594691.1\|WP_068684732.1\|1238_2264_+\|ParB/RepB/Spo0J-family-partition-protein	gnl\|CDD\|319262	cd16405, RepB_like_N, plasmid segregation replication protein B like protein, N-terminal domain. RepB, found on plasmids and secondary chromosomes, works along with repA in directing plasmid segregation, and has been shown in Rhizobium etli to require the parS centromere-like sequence for full transcriptional repression of the repABC operon, inducing plasmid incompatibility. RepA is a Walker-type ATPase that complexes with RepB to form DNA-protein complexes in the presence of ATP/ADP. RepC is an initiator protein for the plasmid. repA and repB are homologous to the parA and ParB genes of the parABS partitioning system found on primary chromosomes.	9.47789e-33
NZ_LR594691.1\|WP_083944790.1\|78_1239_+\|AAA-family-ATPase	gnl\|CDD\|274585	TIGR03453, partition_RepA, plasmid partitioning protein RepA. Members of this family are the RepA (or ParA) protein involved in replicon partitioning. All known examples occur in bacterial species with two or more replicons, on a plasmid or the smaller chromosome. Note that an apparent exception may be seen as a pseudomolecule from assembly of an incompletely sequenced genome. Members of this family belong to a larger family that also includes the enzyme cobyrinic acid a,c-diamide synthase, but assignment of that name to members of this family would be in error. [Mobile and extrachromosomal element functions, Plasmid functions].	1.55763e-65
NZ_LR594691.1\|WP_083944785.1\|11292_12099_+\|type-IV-secretory-system-conjugative-DNA-transfer-family-protein	gnl\|CDD\|374893	pfam16932, T4SS_TraI, Type IV secretory system, conjugal DNA-protein transfer. T4SS_TraI is a family of putative Gram-negative, largely Proteobacterial, type IV conjugal DNA-Protein transfer or VirB secretory pathway (IVSP) proteins.	2.03239e-47
NZ_LR594691.1\|WP_068684714.1\|13389_13704_+\|hypothetical-protein	gnl\|CDD\|377746	pfam06965, Na_H_antiport_1, Na+/H+ antiporter 1. This family contains a number of bacterial Na+/H+ antiporter 1 proteins. These are integral membrane proteins that catalyze the exchange of H+ for Na+ in a manner that is highly dependent on the pH.	0.00807552
NZ_LR594691.1\|WP_068684726.1\|6424_6997_-\|hypothetical-protein	gnl\|CDD\|237057	PRK12323, PRK12323, DNA polymerase III subunit gamma/tau.	0.001543
NZ_LR594691.1\|WP_068684716.1\|12106_13393_+\|Flp-pilus-assembly-complex-ATPase-component-TadA	gnl\|CDD\|131576	TIGR02524, ATP-binding_protein, Dot/Icm secretion system ATPase DotB. Members of this protein family are the DotB component of Dot/Icm secretion systems, as found in obligate intracellular pathogens Legionella pneumophila and Coxiella burnetii. While this system resembles type IV secretion systems and has been called a form of type IV, the liturature now seems to favor calling this the Dot/Icm system. This family is most closely related to TraJ proteins of plasmid transfer, rather than to proteins of other type IV secretion systems.	1.40941e-54
NZ_LR594691.1\|WP_162487236.1\|13907_15203_-\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	6.9126e-39
NZ_LR594691.1\|WP_068684720.1\|10944_11283_+\|DotD/TraH-family-lipoprotein	gnl\|CDD\|379881	pfam16816, DotD, DotD protein. The DotD protein is a component of the Dot/Icm type IVB secretion system. It is involved in the outer membrane targeting of DotH.	3.35023e-15
NZ_LR594691.1\|WP_068684724.1\|7008_8127_-\|hypothetical-protein	gnl\|CDD\|274757	TIGR03739, PRTRC_D, PRTRC system protein D. A novel genetic system characterized by six major proteins, included a ParB homolog and a ThiF homolog, is designated PRTRC, or ParB-Related,ThiF-Related Cassette. It is often found on plasmids. This protein family is designated PRTRC system protein D. The gray zone, between trusted and noise, includes proteins found in the same genomes as other proteins of the PRTRC systems, but not in the same contiguous gene region.	3.45379e-38

>NZ_LR594691.1|WP_068684732.1|1238_2264_+|ParB/RepB/Spo0J-family-partition-protein
MARNLMEKSQKIQVPEARSASTPQTPPSKPKTAPGTLMGFMEGQSTVHQENKVLRDRAEEAERVAEEFKGATPVKMLDPKRIRRSDWANRDPASFDGLTWDEFKDDILKNGGNEVPIRVRPLPDAVEGCEFEIIYGHRRHQACLELGLPIRAQVEDATEHMLFVAMELENRSRKDLSPWEQGMFYAKALDKGLYPSARKLAEAIRRDSSGVNKALGIARLPTAVVEAFASPLEIQYRWAQPLHEAHQSDPDGLLARAKAIAAYGRRQAPGAVFAQLVSPKVPSDGKSRTTADIEIGKVGRKATAVLTSDRKGRAILKFQVDLPAKKRQALAAYAERLLLED
>NZ_LR594691.1|WP_083944790.1|78_1239_+|AAA-family-ATPase
MMGKIRSAMLAPTARKSAPTFNLSQLSALCGAERGSILHRLSKGGLPSGNLNPSGSRREFTLAESREWIREYRKEQRRPQGAEAVTISVGNFKGGVTKTTTAVTLAQGLSLRGHRVLMIDVDPQGSATTLFGILPDTEVEEDQTVLGLALGTESSIRYAIRPTYWDGIDIVAAAPLLFGGEFALPARQSRDPEFEFWSVLDLAIDDVRSEYDVIIIDTPPALSYMTIAAFMASDGIIIPLPPNPLDFASAAQFWNLFSDIAQGFKAQRGYDKNFAFMHILLARVDSSDSASNVVRQWIGQTYAEKVLPVEIPKTAVASSSSAEFGTVYDVAKYDGNARTFKRARDAYDTFVEYVEGSVREVWDTQVEEGANAAPVKPVSSVIEGVA
>NZ_LR594691.1|WP_068684730.1|3212_3887_-|hypothetical-protein
MMHRHQAPTESSLKKWSAAGEFDACVAADQAAAAALAPEPRAFTREEMLRRGKRAGRPGLRLNTRSAISRVYELWPHLADTGSQALLDLAVARVAEGLQSRLAQIAPAGHPPSPATAPAPAAPVVRAVDPTPTAELTLQELDRKMTAMFKELVEVKRELVQFAALRNNLITKLDDAVARTQEAMAATGSRVSGGPDPLVEARRDRDIGVVKSMLTEILEALCKK
>NZ_LR594691.1|WP_068684728.1|4390_5812_-|hypothetical-protein
MSSNPDVNPEFDPNSNRREPDLPESLDAANTDSSADGALANEDFRPAESLSNWFEQAVQPVAPQTAKAYLRNYRMMVDRAAAALNLDPDFVTIEDLLAQLRDDTTITPGTKNTYAAAITWALKQPDFDFSPAVRTQGLALVSDFDPSGGAAQEIIRNTRVSGRTIPQEDLGPLLNALLGARVTQQAWATKTTSWLNAGIATGARPGEWESAYWFDRDRRILRLPNAKLKKQAPFRWQHIPERLLNRADADLVSMAEADRENISSVVSAAKRHSELLARNLAFFDQAEAGTDASNAEGIDTLRRLRAWELHNAGLAWRDIEVPVRWVGAVDAHLTNLQQYLSSAPGKHGPPTFERYYDGCRAALRTACLEAFPDKRLYSLYDTRSTAAANMQATIGPEAAAAVMGHYMKRKRTIKANYAGADRAYRGAGRFAPGLADTQNQRDQAADRAAPQLPMESGGTGDSPEAPTGPLLVE
>NZ_LR594691.1|WP_068684726.1|6424_6997_-|hypothetical-protein
MSVNDNIMDIRVRFHRDESPMLFRALSGMESAPGVRTRNQFVRQLIEMGLLMMEERMRRQDGVPIRVSSGLTDEVTASAVAMARTSGLPAAIQATPETRAAAGIDQVAPIVPAQATSLPTSVVTSPSWTETESARPRPHQATAPPSQIAQQISPAAVRAPAALPVGDDDRPPPRVGAVRPVRMLDGESFE
>NZ_LR594691.1|WP_068684724.1|7008_8127_-|hypothetical-protein
MSNASGAPIVAAIDLGYGLTKFTRRNAASGAVEYDLFPSVAFGVDRRRYELEERRSEDVKVVAYNGESFVVGPDVMSRAASSSDFGRHLDDKYYESAPYHALMRGALAYMDEDHLDVLVLGLPVSHFRDPGKPAALKKAYTGKISLDGERSMVIDKVIVRPQPMGGFYSLDRQIDGINATIARFPQSGLKPLADWNQLVDTMTVVTVDPGEYTLDWLLVNHGKPNTDVSGAAGDAGRHRVMVSVKEHLEAKLGRAIAPTNLTRLNNSLRTGAVFKLDGRAIDMKDPEILAAARRAVRDPVSIMMNGIKGAWDIIDMVVMVGGHPSHYAEEIAERMPDMPIYVPKHSVFSNVEGLQLIGEGIAQAEARVAEAA
>NZ_LR594691.1|WP_068684722.1|8770_10654_+|hypothetical-protein
MINSKGDRYCYLNARHTLETVGETGDAGFFSKLHHLLINGNQGKGPPKQWASMIRALQTKGVKRSELEDSKILESLEASVDKSLTKEQVAGLVLSGLPTVKELELASPRYASWRHPGGNYKELLYVLNSQRDNVQDELSELEYRLEAMQYDAADLAFSLESLMDDPELPSRMQAQMKALRDLLPKAWDYATPHFRDALDGTVDKNIMAHARITERGELFFVEEIQSDWAQAGGKASRAAAREAVIRLLMARLGEGASHSDRTLLENAIRSKASVELRGVKYDPKDPEMIAAAEEGRKAGWSGNTPAAPFITNTEEWSGLILRRLMQRAAAIPAVNQFAWITQSMRNGGRAGGGASLDDFYKNILPKLADKLLKPLGAKVTMGQVSLNGTMHDVPQFEMTPAVKEALRGPMPLYSMSPVWKGARNGQAEVNRVLAECELMMGTARHVKLMDALYDIATHRQVAGKYINNGILLNLHAQNLDRAARHEAWHFATENMLTVEERVAMQREFASHKPLARRTQQTLIELGEIEAARQCSHPEECAAHAFALWTSGEMEITEPAPKGLFQEVWAVLKDCGRWLAERVSGEKAVTTESMFEALRTGELAKMRHSRARGPQEMDIEHRAPRMVA
>NZ_LR594691.1|WP_068684720.1|10944_11283_+|DotD/TraH-family-lipoprotein
MAVQLDRLFQKSANQAAFTGSADAKAPAPRMADGKLWVTWRGDANDLLKNLEPVTGQKVSVTGPTPRLPLYVQVHALGVPVDEVMRDIGYQLGQRADLVLLPSGVEIRYRAF
>NZ_LR594691.1|WP_083944785.1|11292_12099_+|type-IV-secretory-system-conjugative-DNA-transfer-family-protein
MTRTTPSLRITFAVMALALAAAQAASAQTQSLSIDSLMNAQGATESESRLSMVRETALRETAFGLGTRLGLLQRSREIAAEVAKRDRELDKRFDFGGLMMGPGVLPPVIMESHDAISLEATTMRVSGAIYKIEEPARFVAIAPTWRDWLLLGLPNEDAADMSAVKSLLPRDSAEQAFWKKEVAQAVATGRAQAQQIFDLNVANLEKTYFGMRLFYDLWKRGMVTIPVVASAQTMVDHENPNTISVGNTMFRITRQAGFEDSSRWKPLE
>NZ_LR594691.1|WP_068684716.1|12106_13393_+|Flp-pilus-assembly-complex-ATPase-component-TadA
MLDAAEKAIPRFHLPIGNIRRQDLNEFLSNVYDLGVSDIKFSSTDYVWAEVNRMWQPVTDRRLDDSEVNTILALLFNESGQTEIGAANAIDSRVDAVISRDKVVSFRLNATGCSVGNTPSGVNITLRAMPQQIPTCAQLGLEPELMDNLFPRYGMVLIVGTTGSGKSTLLAAAHRYRLEERRDDPVHILTYEQPVEYLLKGYAEGFMPEPTQTEVGMGAQLRSMDMVGPNAMRRKGQVIQMGEIRDMDSARAGFELGATGHAAYATMHTETPDRALSRTLQLFPPVEHARVANEFIEQARLVIAQKLARRLDGKVIAFRSWCVFDREVKRSIEDLPTHQWGSEVRKLVAKRGNDFESKAFAALADGLISYESFVEVSSMTRGEANEYCAHRGFNPNAGPVVTSLPTELPVATQNAAPKNEAIVEAEAA
>NZ_LR594691.1|WP_068684714.1|13389_13704_+|hypothetical-protein
MSSSYWPRTGKSYRIPGTPLPPQAGAPMVLALFYFSWWTLAIAFAVCAVFGYASYKNRTILWALRRLRSKMRSGVIAARPRFYRQRFTFDQQLADIDFREWGKK
>NZ_LR594691.1|WP_162487236.1|13907_15203_-|HAMP-domain-containing-histidine-kinase
MNRYVWESRRRMPAGLLICFAMAAMAVGAGIPYWQALLWLGLVLLGNGVRFAAERKCSRSLLEASAQTRTEYLKRFAPIYPFVATVWGCSTLLFFGRTSSLHQFASWFLVARMLYAPMPTFSLIPIIFRLYASFFFVSTLLCISYLVWGDSSRTALLWVIPVGLAQLILTLRVSRDTHRAQAEQYGLIFDLAAQKHAADDKVKSKNRSFAAAAHDMRQPVIALSLYAEHLESHPESHVEVGPKIARASAAVSKLFNSLFDLAHFDTCEVKLSVEPVRISEVIAGLVETQKQEAEAAGIELRVRVKDALLQTDPTRLRRMIANVISNSIRYSKPGTKILLASRVHRGKLRVEVWDQGIGIAPANLPHVFSEFYRVESSASLAPEGMGIGLSMVARLADALNTKITITSVEGRGTRVTMDISDVDPDAARRRH

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Crispr_ID: NZ_LR594691_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR594691_2

6085-6185

Orphan

Consensus_repeat	Method
TAACTGTGAATAGTCGCGACTATT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LR594691_2

>merge|NZ_LR594691|2|6085-6185|CRISPRCasFinder
TAACTGTGAATAATCGCGACTATTCACAGTTGTCTGGAAAATTCGGCCCAAAAATGCCCAAATTCAGGGCCGCGCCTAACCGTGAGTAATCGCGACTATTC

>NZ_LR594691|2|2|6085-6185|CRISPRCasFinder
TAACTGTGAATAATCGCGACTATT	CACAGTTGTCTGGAAAATTCGGCCCAAAAATGCCCAAATTCAGGGCCGCGCC
TAACCGTGAGTAATCGCGACTATTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR594691.1\|WP_083944785.1\|11292_12099_+\|type-IV-secretory-system-conjugative-DNA-transfer-family-protein	unknown	unknown	gnl\|CDD\|374893
NZ_LR594691.1\|WP_068684720.1\|10944_11283_+\|DotD/TraH-family-lipoprotein	unknown	unknown	gnl\|CDD\|379881
NZ_LR594691.1\|WP_068684722.1\|8770_10654_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594691.1\|WP_068684726.1\|6424_6997_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237057
NZ_LR594691.1\|WP_068684710.1\|15647_17015_+\|YqaJ-viral-recombinase-family-protein	unknown	unknown	gnl\|CDD\|200235
NZ_LR594691.1\|WP_068684730.1\|3212_3887_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594691.1\|WP_068684732.1\|1238_2264_+\|ParB/RepB/Spo0J-family-partition-protein	unknown	unknown	gnl\|CDD\|319262
NZ_LR594691.1\|WP_083944790.1\|78_1239_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|274585
NZ_LR594691.1\|WP_162487236.1\|13907_15203_-\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_LR594691.1\|WP_068684716.1\|12106_13393_+\|Flp-pilus-assembly-complex-ATPase-component-TadA	unknown	unknown	gnl\|CDD\|131576
NZ_LR594691.1\|WP_068684728.1\|4390_5812_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594691.1\|WP_068684714.1\|13389_13704_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377746
NZ_LR594691.1\|WP_068684724.1\|7008_8127_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274757
NZ_LR594691.1\|WP_068684708.1\|17130_17895_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_LR594691.1\|WP_068684732.1\|1238_2264_+\|ParB/RepB/Spo0J-family-partition-protein	gnl\|CDD\|319262	cd16405, RepB_like_N, plasmid segregation replication protein B like protein, N-terminal domain. RepB, found on plasmids and secondary chromosomes, works along with repA in directing plasmid segregation, and has been shown in Rhizobium etli to require the parS centromere-like sequence for full transcriptional repression of the repABC operon, inducing plasmid incompatibility. RepA is a Walker-type ATPase that complexes with RepB to form DNA-protein complexes in the presence of ATP/ADP. RepC is an initiator protein for the plasmid. repA and repB are homologous to the parA and ParB genes of the parABS partitioning system found on primary chromosomes.	9.47789e-33
NZ_LR594691.1\|WP_083944790.1\|78_1239_+\|AAA-family-ATPase	gnl\|CDD\|274585	TIGR03453, partition_RepA, plasmid partitioning protein RepA. Members of this family are the RepA (or ParA) protein involved in replicon partitioning. All known examples occur in bacterial species with two or more replicons, on a plasmid or the smaller chromosome. Note that an apparent exception may be seen as a pseudomolecule from assembly of an incompletely sequenced genome. Members of this family belong to a larger family that also includes the enzyme cobyrinic acid a,c-diamide synthase, but assignment of that name to members of this family would be in error. [Mobile and extrachromosomal element functions, Plasmid functions].	1.55763e-65
NZ_LR594691.1\|WP_083944785.1\|11292_12099_+\|type-IV-secretory-system-conjugative-DNA-transfer-family-protein	gnl\|CDD\|374893	pfam16932, T4SS_TraI, Type IV secretory system, conjugal DNA-protein transfer. T4SS_TraI is a family of putative Gram-negative, largely Proteobacterial, type IV conjugal DNA-Protein transfer or VirB secretory pathway (IVSP) proteins.	2.03239e-47
NZ_LR594691.1\|WP_068684714.1\|13389_13704_+\|hypothetical-protein	gnl\|CDD\|377746	pfam06965, Na_H_antiport_1, Na+/H+ antiporter 1. This family contains a number of bacterial Na+/H+ antiporter 1 proteins. These are integral membrane proteins that catalyze the exchange of H+ for Na+ in a manner that is highly dependent on the pH.	0.00807552
NZ_LR594691.1\|WP_068684726.1\|6424_6997_-\|hypothetical-protein	gnl\|CDD\|237057	PRK12323, PRK12323, DNA polymerase III subunit gamma/tau.	0.001543
NZ_LR594691.1\|WP_068684716.1\|12106_13393_+\|Flp-pilus-assembly-complex-ATPase-component-TadA	gnl\|CDD\|131576	TIGR02524, ATP-binding_protein, Dot/Icm secretion system ATPase DotB. Members of this protein family are the DotB component of Dot/Icm secretion systems, as found in obligate intracellular pathogens Legionella pneumophila and Coxiella burnetii. While this system resembles type IV secretion systems and has been called a form of type IV, the liturature now seems to favor calling this the Dot/Icm system. This family is most closely related to TraJ proteins of plasmid transfer, rather than to proteins of other type IV secretion systems.	1.40941e-54
NZ_LR594691.1\|WP_162487236.1\|13907_15203_-\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	6.9126e-39
NZ_LR594691.1\|WP_068684720.1\|10944_11283_+\|DotD/TraH-family-lipoprotein	gnl\|CDD\|379881	pfam16816, DotD, DotD protein. The DotD protein is a component of the Dot/Icm type IVB secretion system. It is involved in the outer membrane targeting of DotH.	3.35023e-15
NZ_LR594691.1\|WP_068684724.1\|7008_8127_-\|hypothetical-protein	gnl\|CDD\|274757	TIGR03739, PRTRC_D, PRTRC system protein D. A novel genetic system characterized by six major proteins, included a ParB homolog and a ThiF homolog, is designated PRTRC, or ParB-Related,ThiF-Related Cassette. It is often found on plasmids. This protein family is designated PRTRC system protein D. The gray zone, between trusted and noise, includes proteins found in the same genomes as other proteins of the PRTRC systems, but not in the same contiguous gene region.	3.45379e-38
NZ_LR594691.1\|WP_068684710.1\|15647_17015_+\|YqaJ-viral-recombinase-family-protein	gnl\|CDD\|200235	TIGR03033, hypothetical_protein, putative phage-type endonuclease. Members of this protein family are found often in phage genomes and in prokaryotic genomes in uncharacterized regions that resemble integrated prophage regions.	0.000700111

>NZ_LR594691.1|WP_068684728.1|4390_5812_-|hypothetical-protein
MSSNPDVNPEFDPNSNRREPDLPESLDAANTDSSADGALANEDFRPAESLSNWFEQAVQPVAPQTAKAYLRNYRMMVDRAAAALNLDPDFVTIEDLLAQLRDDTTITPGTKNTYAAAITWALKQPDFDFSPAVRTQGLALVSDFDPSGGAAQEIIRNTRVSGRTIPQEDLGPLLNALLGARVTQQAWATKTTSWLNAGIATGARPGEWESAYWFDRDRRILRLPNAKLKKQAPFRWQHIPERLLNRADADLVSMAEADRENISSVVSAAKRHSELLARNLAFFDQAEAGTDASNAEGIDTLRRLRAWELHNAGLAWRDIEVPVRWVGAVDAHLTNLQQYLSSAPGKHGPPTFERYYDGCRAALRTACLEAFPDKRLYSLYDTRSTAAANMQATIGPEAAAAVMGHYMKRKRTIKANYAGADRAYRGAGRFAPGLADTQNQRDQAADRAAPQLPMESGGTGDSPEAPTGPLLVE
>NZ_LR594691.1|WP_068684730.1|3212_3887_-|hypothetical-protein
MMHRHQAPTESSLKKWSAAGEFDACVAADQAAAAALAPEPRAFTREEMLRRGKRAGRPGLRLNTRSAISRVYELWPHLADTGSQALLDLAVARVAEGLQSRLAQIAPAGHPPSPATAPAPAAPVVRAVDPTPTAELTLQELDRKMTAMFKELVEVKRELVQFAALRNNLITKLDDAVARTQEAMAATGSRVSGGPDPLVEARRDRDIGVVKSMLTEILEALCKK
>NZ_LR594691.1|WP_068684732.1|1238_2264_+|ParB/RepB/Spo0J-family-partition-protein
MARNLMEKSQKIQVPEARSASTPQTPPSKPKTAPGTLMGFMEGQSTVHQENKVLRDRAEEAERVAEEFKGATPVKMLDPKRIRRSDWANRDPASFDGLTWDEFKDDILKNGGNEVPIRVRPLPDAVEGCEFEIIYGHRRHQACLELGLPIRAQVEDATEHMLFVAMELENRSRKDLSPWEQGMFYAKALDKGLYPSARKLAEAIRRDSSGVNKALGIARLPTAVVEAFASPLEIQYRWAQPLHEAHQSDPDGLLARAKAIAAYGRRQAPGAVFAQLVSPKVPSDGKSRTTADIEIGKVGRKATAVLTSDRKGRAILKFQVDLPAKKRQALAAYAERLLLED
>NZ_LR594691.1|WP_083944790.1|78_1239_+|AAA-family-ATPase
MMGKIRSAMLAPTARKSAPTFNLSQLSALCGAERGSILHRLSKGGLPSGNLNPSGSRREFTLAESREWIREYRKEQRRPQGAEAVTISVGNFKGGVTKTTTAVTLAQGLSLRGHRVLMIDVDPQGSATTLFGILPDTEVEEDQTVLGLALGTESSIRYAIRPTYWDGIDIVAAAPLLFGGEFALPARQSRDPEFEFWSVLDLAIDDVRSEYDVIIIDTPPALSYMTIAAFMASDGIIIPLPPNPLDFASAAQFWNLFSDIAQGFKAQRGYDKNFAFMHILLARVDSSDSASNVVRQWIGQTYAEKVLPVEIPKTAVASSSSAEFGTVYDVAKYDGNARTFKRARDAYDTFVEYVEGSVREVWDTQVEEGANAAPVKPVSSVIEGVA
>NZ_LR594691.1|WP_068684726.1|6424_6997_-|hypothetical-protein
MSVNDNIMDIRVRFHRDESPMLFRALSGMESAPGVRTRNQFVRQLIEMGLLMMEERMRRQDGVPIRVSSGLTDEVTASAVAMARTSGLPAAIQATPETRAAAGIDQVAPIVPAQATSLPTSVVTSPSWTETESARPRPHQATAPPSQIAQQISPAAVRAPAALPVGDDDRPPPRVGAVRPVRMLDGESFE
>NZ_LR594691.1|WP_068684724.1|7008_8127_-|hypothetical-protein
MSNASGAPIVAAIDLGYGLTKFTRRNAASGAVEYDLFPSVAFGVDRRRYELEERRSEDVKVVAYNGESFVVGPDVMSRAASSSDFGRHLDDKYYESAPYHALMRGALAYMDEDHLDVLVLGLPVSHFRDPGKPAALKKAYTGKISLDGERSMVIDKVIVRPQPMGGFYSLDRQIDGINATIARFPQSGLKPLADWNQLVDTMTVVTVDPGEYTLDWLLVNHGKPNTDVSGAAGDAGRHRVMVSVKEHLEAKLGRAIAPTNLTRLNNSLRTGAVFKLDGRAIDMKDPEILAAARRAVRDPVSIMMNGIKGAWDIIDMVVMVGGHPSHYAEEIAERMPDMPIYVPKHSVFSNVEGLQLIGEGIAQAEARVAEAA
>NZ_LR594691.1|WP_068684722.1|8770_10654_+|hypothetical-protein
MINSKGDRYCYLNARHTLETVGETGDAGFFSKLHHLLINGNQGKGPPKQWASMIRALQTKGVKRSELEDSKILESLEASVDKSLTKEQVAGLVLSGLPTVKELELASPRYASWRHPGGNYKELLYVLNSQRDNVQDELSELEYRLEAMQYDAADLAFSLESLMDDPELPSRMQAQMKALRDLLPKAWDYATPHFRDALDGTVDKNIMAHARITERGELFFVEEIQSDWAQAGGKASRAAAREAVIRLLMARLGEGASHSDRTLLENAIRSKASVELRGVKYDPKDPEMIAAAEEGRKAGWSGNTPAAPFITNTEEWSGLILRRLMQRAAAIPAVNQFAWITQSMRNGGRAGGGASLDDFYKNILPKLADKLLKPLGAKVTMGQVSLNGTMHDVPQFEMTPAVKEALRGPMPLYSMSPVWKGARNGQAEVNRVLAECELMMGTARHVKLMDALYDIATHRQVAGKYINNGILLNLHAQNLDRAARHEAWHFATENMLTVEERVAMQREFASHKPLARRTQQTLIELGEIEAARQCSHPEECAAHAFALWTSGEMEITEPAPKGLFQEVWAVLKDCGRWLAERVSGEKAVTTESMFEALRTGELAKMRHSRARGPQEMDIEHRAPRMVA
>NZ_LR594691.1|WP_068684720.1|10944_11283_+|DotD/TraH-family-lipoprotein
MAVQLDRLFQKSANQAAFTGSADAKAPAPRMADGKLWVTWRGDANDLLKNLEPVTGQKVSVTGPTPRLPLYVQVHALGVPVDEVMRDIGYQLGQRADLVLLPSGVEIRYRAF
>NZ_LR594691.1|WP_083944785.1|11292_12099_+|type-IV-secretory-system-conjugative-DNA-transfer-family-protein
MTRTTPSLRITFAVMALALAAAQAASAQTQSLSIDSLMNAQGATESESRLSMVRETALRETAFGLGTRLGLLQRSREIAAEVAKRDRELDKRFDFGGLMMGPGVLPPVIMESHDAISLEATTMRVSGAIYKIEEPARFVAIAPTWRDWLLLGLPNEDAADMSAVKSLLPRDSAEQAFWKKEVAQAVATGRAQAQQIFDLNVANLEKTYFGMRLFYDLWKRGMVTIPVVASAQTMVDHENPNTISVGNTMFRITRQAGFEDSSRWKPLE
>NZ_LR594691.1|WP_068684716.1|12106_13393_+|Flp-pilus-assembly-complex-ATPase-component-TadA
MLDAAEKAIPRFHLPIGNIRRQDLNEFLSNVYDLGVSDIKFSSTDYVWAEVNRMWQPVTDRRLDDSEVNTILALLFNESGQTEIGAANAIDSRVDAVISRDKVVSFRLNATGCSVGNTPSGVNITLRAMPQQIPTCAQLGLEPELMDNLFPRYGMVLIVGTTGSGKSTLLAAAHRYRLEERRDDPVHILTYEQPVEYLLKGYAEGFMPEPTQTEVGMGAQLRSMDMVGPNAMRRKGQVIQMGEIRDMDSARAGFELGATGHAAYATMHTETPDRALSRTLQLFPPVEHARVANEFIEQARLVIAQKLARRLDGKVIAFRSWCVFDREVKRSIEDLPTHQWGSEVRKLVAKRGNDFESKAFAALADGLISYESFVEVSSMTRGEANEYCAHRGFNPNAGPVVTSLPTELPVATQNAAPKNEAIVEAEAA
>NZ_LR594691.1|WP_068684714.1|13389_13704_+|hypothetical-protein
MSSSYWPRTGKSYRIPGTPLPPQAGAPMVLALFYFSWWTLAIAFAVCAVFGYASYKNRTILWALRRLRSKMRSGVIAARPRFYRQRFTFDQQLADIDFREWGKK
>NZ_LR594691.1|WP_162487236.1|13907_15203_-|HAMP-domain-containing-histidine-kinase
MNRYVWESRRRMPAGLLICFAMAAMAVGAGIPYWQALLWLGLVLLGNGVRFAAERKCSRSLLEASAQTRTEYLKRFAPIYPFVATVWGCSTLLFFGRTSSLHQFASWFLVARMLYAPMPTFSLIPIIFRLYASFFFVSTLLCISYLVWGDSSRTALLWVIPVGLAQLILTLRVSRDTHRAQAEQYGLIFDLAAQKHAADDKVKSKNRSFAAAAHDMRQPVIALSLYAEHLESHPESHVEVGPKIARASAAVSKLFNSLFDLAHFDTCEVKLSVEPVRISEVIAGLVETQKQEAEAAGIELRVRVKDALLQTDPTRLRRMIANVISNSIRYSKPGTKILLASRVHRGKLRVEVWDQGIGIAPANLPHVFSEFYRVESSASLAPEGMGIGLSMVARLADALNTKITITSVEGRGTRVTMDISDVDPDAARRRH
>NZ_LR594691.1|WP_068684710.1|15647_17015_+|YqaJ-viral-recombinase-family-protein
MEELDRQLTADDKAEITKKVWSLVDALPQRDLIELSDARQWIGRVVELHGEQAIWHAIRLNGFGGSEIGVLVRNQHGVRADHMASAHDIVLGKLMRKVPDETNEHMTRGHENEEPHSRKFYKKYGAHRDLEAFGILSKAQGSLPWMRYSPDEVAMLPSKVLAATRPMAAERPMSRWLIDYKAPSKIEEDDEIHFQYGCQLAQGAILCEENGVEIHGLMLSQFDWAGWRLKDDVVEVGEELKHLVREAGNWAWNCVMTKQVPPYVRTPVLTDSEGFVAKHVDLAERLANVSALSKAADARAQELRAELLVGLDGRKLDGCKIVLPGAGALTANLKIDTEKLQAELKPEQLAMVTKKDGYDSAAMARHLKSLDVDLKQFKADKIDADKLAEHAESFGIDLEAYMAEQHVFKIDKPIKEEMERYIDTHFPLVAPPQAVADEQAADQFAEEPMAESPRG
>NZ_LR594691.1|WP_068684708.1|17130_17895_+|hypothetical-protein
MAIVKANTNRQSLTFISLVERTNKHLSAAEVEKNPELKVPGFLYKNPQGQHELARQLSGSVVSVKVGTDKYEPVGQPAVVYPIATVRLTDGESVKIRLDQQLGRTVIGLLAANALSHGDGPVDIYVSHVRAGDRIGNGEPFDRDRSFISVKPEGAANNMKFAPIYAGEDGQILVDGEGKPAGLPKAKTVRFQGQDRLDWEEINNIAVWTAAGLESYYKDKDAQAHTSSQAPDDHEQQNDGIDLNEAAAAAAPRG

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Crispr_ID: NZ_LR594691_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR594691_3

6249-6402

Orphan

Consensus_repeat	Method
TAACTGTGAATAGTCGCGACTATT	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_LR594691_3

>merge|NZ_LR594691|3|6249-6402|CRISPRCasFinder
CAACTGCTAATAATCGCGACTATTCACAGTTGCTCGCGCGGGTGGCTCGGCGTGGTCATCGCATCTAACTGTGAATAGTCGCGACTATTAGCAATTAGCTGCCAACCACCCAAGTACCACTCTGGACGGTTAACTGTGAATAGTCGCGACTATT

>NZ_LR594691|3|3|6249-6402|CRISPRCasFinder
CAACTGCTAATAATCGCGACTATT	CACAGTTGCTCGCGCGGGTGGCTCGGCGTGGTCATCGCATC
TAACTGTGAATAGTCGCGACTATT	AGCAATTAGCTGCCAACCACCCAAGTACCACTCTGGACGGT
TAACTGTGAATAGTCGCGACTATT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR594691.1\|WP_083944785.1\|11292_12099_+\|type-IV-secretory-system-conjugative-DNA-transfer-family-protein	unknown	unknown	gnl\|CDD\|374893
NZ_LR594691.1\|WP_068684720.1\|10944_11283_+\|DotD/TraH-family-lipoprotein	unknown	unknown	gnl\|CDD\|379881
NZ_LR594691.1\|WP_068684722.1\|8770_10654_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594691.1\|WP_068684726.1\|6424_6997_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237057
NZ_LR594691.1\|WP_068684710.1\|15647_17015_+\|YqaJ-viral-recombinase-family-protein	unknown	unknown	gnl\|CDD\|200235
NZ_LR594691.1\|WP_068684730.1\|3212_3887_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594691.1\|WP_068684732.1\|1238_2264_+\|ParB/RepB/Spo0J-family-partition-protein	unknown	unknown	gnl\|CDD\|319262
NZ_LR594691.1\|WP_083944790.1\|78_1239_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|274585
NZ_LR594691.1\|WP_162487236.1\|13907_15203_-\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_LR594691.1\|WP_068684716.1\|12106_13393_+\|Flp-pilus-assembly-complex-ATPase-component-TadA	unknown	unknown	gnl\|CDD\|131576
NZ_LR594691.1\|WP_068684728.1\|4390_5812_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594691.1\|WP_068684714.1\|13389_13704_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377746
NZ_LR594691.1\|WP_068684724.1\|7008_8127_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274757
NZ_LR594691.1\|WP_068684708.1\|17130_17895_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_LR594691.1\|WP_068684732.1\|1238_2264_+\|ParB/RepB/Spo0J-family-partition-protein	gnl\|CDD\|319262	cd16405, RepB_like_N, plasmid segregation replication protein B like protein, N-terminal domain. RepB, found on plasmids and secondary chromosomes, works along with repA in directing plasmid segregation, and has been shown in Rhizobium etli to require the parS centromere-like sequence for full transcriptional repression of the repABC operon, inducing plasmid incompatibility. RepA is a Walker-type ATPase that complexes with RepB to form DNA-protein complexes in the presence of ATP/ADP. RepC is an initiator protein for the plasmid. repA and repB are homologous to the parA and ParB genes of the parABS partitioning system found on primary chromosomes.	9.47789e-33
NZ_LR594691.1\|WP_083944790.1\|78_1239_+\|AAA-family-ATPase	gnl\|CDD\|274585	TIGR03453, partition_RepA, plasmid partitioning protein RepA. Members of this family are the RepA (or ParA) protein involved in replicon partitioning. All known examples occur in bacterial species with two or more replicons, on a plasmid or the smaller chromosome. Note that an apparent exception may be seen as a pseudomolecule from assembly of an incompletely sequenced genome. Members of this family belong to a larger family that also includes the enzyme cobyrinic acid a,c-diamide synthase, but assignment of that name to members of this family would be in error. [Mobile and extrachromosomal element functions, Plasmid functions].	1.55763e-65
NZ_LR594691.1\|WP_083944785.1\|11292_12099_+\|type-IV-secretory-system-conjugative-DNA-transfer-family-protein	gnl\|CDD\|374893	pfam16932, T4SS_TraI, Type IV secretory system, conjugal DNA-protein transfer. T4SS_TraI is a family of putative Gram-negative, largely Proteobacterial, type IV conjugal DNA-Protein transfer or VirB secretory pathway (IVSP) proteins.	2.03239e-47
NZ_LR594691.1\|WP_068684714.1\|13389_13704_+\|hypothetical-protein	gnl\|CDD\|377746	pfam06965, Na_H_antiport_1, Na+/H+ antiporter 1. This family contains a number of bacterial Na+/H+ antiporter 1 proteins. These are integral membrane proteins that catalyze the exchange of H+ for Na+ in a manner that is highly dependent on the pH.	0.00807552
NZ_LR594691.1\|WP_068684726.1\|6424_6997_-\|hypothetical-protein	gnl\|CDD\|237057	PRK12323, PRK12323, DNA polymerase III subunit gamma/tau.	0.001543
NZ_LR594691.1\|WP_068684716.1\|12106_13393_+\|Flp-pilus-assembly-complex-ATPase-component-TadA	gnl\|CDD\|131576	TIGR02524, ATP-binding_protein, Dot/Icm secretion system ATPase DotB. Members of this protein family are the DotB component of Dot/Icm secretion systems, as found in obligate intracellular pathogens Legionella pneumophila and Coxiella burnetii. While this system resembles type IV secretion systems and has been called a form of type IV, the liturature now seems to favor calling this the Dot/Icm system. This family is most closely related to TraJ proteins of plasmid transfer, rather than to proteins of other type IV secretion systems.	1.40941e-54
NZ_LR594691.1\|WP_162487236.1\|13907_15203_-\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	6.9126e-39
NZ_LR594691.1\|WP_068684720.1\|10944_11283_+\|DotD/TraH-family-lipoprotein	gnl\|CDD\|379881	pfam16816, DotD, DotD protein. The DotD protein is a component of the Dot/Icm type IVB secretion system. It is involved in the outer membrane targeting of DotH.	3.35023e-15
NZ_LR594691.1\|WP_068684724.1\|7008_8127_-\|hypothetical-protein	gnl\|CDD\|274757	TIGR03739, PRTRC_D, PRTRC system protein D. A novel genetic system characterized by six major proteins, included a ParB homolog and a ThiF homolog, is designated PRTRC, or ParB-Related,ThiF-Related Cassette. It is often found on plasmids. This protein family is designated PRTRC system protein D. The gray zone, between trusted and noise, includes proteins found in the same genomes as other proteins of the PRTRC systems, but not in the same contiguous gene region.	3.45379e-38
NZ_LR594691.1\|WP_068684710.1\|15647_17015_+\|YqaJ-viral-recombinase-family-protein	gnl\|CDD\|200235	TIGR03033, hypothetical_protein, putative phage-type endonuclease. Members of this protein family are found often in phage genomes and in prokaryotic genomes in uncharacterized regions that resemble integrated prophage regions.	0.000700111

>NZ_LR594691.1|WP_068684728.1|4390_5812_-|hypothetical-protein
MSSNPDVNPEFDPNSNRREPDLPESLDAANTDSSADGALANEDFRPAESLSNWFEQAVQPVAPQTAKAYLRNYRMMVDRAAAALNLDPDFVTIEDLLAQLRDDTTITPGTKNTYAAAITWALKQPDFDFSPAVRTQGLALVSDFDPSGGAAQEIIRNTRVSGRTIPQEDLGPLLNALLGARVTQQAWATKTTSWLNAGIATGARPGEWESAYWFDRDRRILRLPNAKLKKQAPFRWQHIPERLLNRADADLVSMAEADRENISSVVSAAKRHSELLARNLAFFDQAEAGTDASNAEGIDTLRRLRAWELHNAGLAWRDIEVPVRWVGAVDAHLTNLQQYLSSAPGKHGPPTFERYYDGCRAALRTACLEAFPDKRLYSLYDTRSTAAANMQATIGPEAAAAVMGHYMKRKRTIKANYAGADRAYRGAGRFAPGLADTQNQRDQAADRAAPQLPMESGGTGDSPEAPTGPLLVE
>NZ_LR594691.1|WP_068684730.1|3212_3887_-|hypothetical-protein
MMHRHQAPTESSLKKWSAAGEFDACVAADQAAAAALAPEPRAFTREEMLRRGKRAGRPGLRLNTRSAISRVYELWPHLADTGSQALLDLAVARVAEGLQSRLAQIAPAGHPPSPATAPAPAAPVVRAVDPTPTAELTLQELDRKMTAMFKELVEVKRELVQFAALRNNLITKLDDAVARTQEAMAATGSRVSGGPDPLVEARRDRDIGVVKSMLTEILEALCKK
>NZ_LR594691.1|WP_068684732.1|1238_2264_+|ParB/RepB/Spo0J-family-partition-protein
MARNLMEKSQKIQVPEARSASTPQTPPSKPKTAPGTLMGFMEGQSTVHQENKVLRDRAEEAERVAEEFKGATPVKMLDPKRIRRSDWANRDPASFDGLTWDEFKDDILKNGGNEVPIRVRPLPDAVEGCEFEIIYGHRRHQACLELGLPIRAQVEDATEHMLFVAMELENRSRKDLSPWEQGMFYAKALDKGLYPSARKLAEAIRRDSSGVNKALGIARLPTAVVEAFASPLEIQYRWAQPLHEAHQSDPDGLLARAKAIAAYGRRQAPGAVFAQLVSPKVPSDGKSRTTADIEIGKVGRKATAVLTSDRKGRAILKFQVDLPAKKRQALAAYAERLLLED
>NZ_LR594691.1|WP_083944790.1|78_1239_+|AAA-family-ATPase
MMGKIRSAMLAPTARKSAPTFNLSQLSALCGAERGSILHRLSKGGLPSGNLNPSGSRREFTLAESREWIREYRKEQRRPQGAEAVTISVGNFKGGVTKTTTAVTLAQGLSLRGHRVLMIDVDPQGSATTLFGILPDTEVEEDQTVLGLALGTESSIRYAIRPTYWDGIDIVAAAPLLFGGEFALPARQSRDPEFEFWSVLDLAIDDVRSEYDVIIIDTPPALSYMTIAAFMASDGIIIPLPPNPLDFASAAQFWNLFSDIAQGFKAQRGYDKNFAFMHILLARVDSSDSASNVVRQWIGQTYAEKVLPVEIPKTAVASSSSAEFGTVYDVAKYDGNARTFKRARDAYDTFVEYVEGSVREVWDTQVEEGANAAPVKPVSSVIEGVA
>NZ_LR594691.1|WP_068684726.1|6424_6997_-|hypothetical-protein
MSVNDNIMDIRVRFHRDESPMLFRALSGMESAPGVRTRNQFVRQLIEMGLLMMEERMRRQDGVPIRVSSGLTDEVTASAVAMARTSGLPAAIQATPETRAAAGIDQVAPIVPAQATSLPTSVVTSPSWTETESARPRPHQATAPPSQIAQQISPAAVRAPAALPVGDDDRPPPRVGAVRPVRMLDGESFE
>NZ_LR594691.1|WP_068684724.1|7008_8127_-|hypothetical-protein
MSNASGAPIVAAIDLGYGLTKFTRRNAASGAVEYDLFPSVAFGVDRRRYELEERRSEDVKVVAYNGESFVVGPDVMSRAASSSDFGRHLDDKYYESAPYHALMRGALAYMDEDHLDVLVLGLPVSHFRDPGKPAALKKAYTGKISLDGERSMVIDKVIVRPQPMGGFYSLDRQIDGINATIARFPQSGLKPLADWNQLVDTMTVVTVDPGEYTLDWLLVNHGKPNTDVSGAAGDAGRHRVMVSVKEHLEAKLGRAIAPTNLTRLNNSLRTGAVFKLDGRAIDMKDPEILAAARRAVRDPVSIMMNGIKGAWDIIDMVVMVGGHPSHYAEEIAERMPDMPIYVPKHSVFSNVEGLQLIGEGIAQAEARVAEAA
>NZ_LR594691.1|WP_068684722.1|8770_10654_+|hypothetical-protein
MINSKGDRYCYLNARHTLETVGETGDAGFFSKLHHLLINGNQGKGPPKQWASMIRALQTKGVKRSELEDSKILESLEASVDKSLTKEQVAGLVLSGLPTVKELELASPRYASWRHPGGNYKELLYVLNSQRDNVQDELSELEYRLEAMQYDAADLAFSLESLMDDPELPSRMQAQMKALRDLLPKAWDYATPHFRDALDGTVDKNIMAHARITERGELFFVEEIQSDWAQAGGKASRAAAREAVIRLLMARLGEGASHSDRTLLENAIRSKASVELRGVKYDPKDPEMIAAAEEGRKAGWSGNTPAAPFITNTEEWSGLILRRLMQRAAAIPAVNQFAWITQSMRNGGRAGGGASLDDFYKNILPKLADKLLKPLGAKVTMGQVSLNGTMHDVPQFEMTPAVKEALRGPMPLYSMSPVWKGARNGQAEVNRVLAECELMMGTARHVKLMDALYDIATHRQVAGKYINNGILLNLHAQNLDRAARHEAWHFATENMLTVEERVAMQREFASHKPLARRTQQTLIELGEIEAARQCSHPEECAAHAFALWTSGEMEITEPAPKGLFQEVWAVLKDCGRWLAERVSGEKAVTTESMFEALRTGELAKMRHSRARGPQEMDIEHRAPRMVA
>NZ_LR594691.1|WP_068684720.1|10944_11283_+|DotD/TraH-family-lipoprotein
MAVQLDRLFQKSANQAAFTGSADAKAPAPRMADGKLWVTWRGDANDLLKNLEPVTGQKVSVTGPTPRLPLYVQVHALGVPVDEVMRDIGYQLGQRADLVLLPSGVEIRYRAF
>NZ_LR594691.1|WP_083944785.1|11292_12099_+|type-IV-secretory-system-conjugative-DNA-transfer-family-protein
MTRTTPSLRITFAVMALALAAAQAASAQTQSLSIDSLMNAQGATESESRLSMVRETALRETAFGLGTRLGLLQRSREIAAEVAKRDRELDKRFDFGGLMMGPGVLPPVIMESHDAISLEATTMRVSGAIYKIEEPARFVAIAPTWRDWLLLGLPNEDAADMSAVKSLLPRDSAEQAFWKKEVAQAVATGRAQAQQIFDLNVANLEKTYFGMRLFYDLWKRGMVTIPVVASAQTMVDHENPNTISVGNTMFRITRQAGFEDSSRWKPLE
>NZ_LR594691.1|WP_068684716.1|12106_13393_+|Flp-pilus-assembly-complex-ATPase-component-TadA
MLDAAEKAIPRFHLPIGNIRRQDLNEFLSNVYDLGVSDIKFSSTDYVWAEVNRMWQPVTDRRLDDSEVNTILALLFNESGQTEIGAANAIDSRVDAVISRDKVVSFRLNATGCSVGNTPSGVNITLRAMPQQIPTCAQLGLEPELMDNLFPRYGMVLIVGTTGSGKSTLLAAAHRYRLEERRDDPVHILTYEQPVEYLLKGYAEGFMPEPTQTEVGMGAQLRSMDMVGPNAMRRKGQVIQMGEIRDMDSARAGFELGATGHAAYATMHTETPDRALSRTLQLFPPVEHARVANEFIEQARLVIAQKLARRLDGKVIAFRSWCVFDREVKRSIEDLPTHQWGSEVRKLVAKRGNDFESKAFAALADGLISYESFVEVSSMTRGEANEYCAHRGFNPNAGPVVTSLPTELPVATQNAAPKNEAIVEAEAA
>NZ_LR594691.1|WP_068684714.1|13389_13704_+|hypothetical-protein
MSSSYWPRTGKSYRIPGTPLPPQAGAPMVLALFYFSWWTLAIAFAVCAVFGYASYKNRTILWALRRLRSKMRSGVIAARPRFYRQRFTFDQQLADIDFREWGKK
>NZ_LR594691.1|WP_162487236.1|13907_15203_-|HAMP-domain-containing-histidine-kinase
MNRYVWESRRRMPAGLLICFAMAAMAVGAGIPYWQALLWLGLVLLGNGVRFAAERKCSRSLLEASAQTRTEYLKRFAPIYPFVATVWGCSTLLFFGRTSSLHQFASWFLVARMLYAPMPTFSLIPIIFRLYASFFFVSTLLCISYLVWGDSSRTALLWVIPVGLAQLILTLRVSRDTHRAQAEQYGLIFDLAAQKHAADDKVKSKNRSFAAAAHDMRQPVIALSLYAEHLESHPESHVEVGPKIARASAAVSKLFNSLFDLAHFDTCEVKLSVEPVRISEVIAGLVETQKQEAEAAGIELRVRVKDALLQTDPTRLRRMIANVISNSIRYSKPGTKILLASRVHRGKLRVEVWDQGIGIAPANLPHVFSEFYRVESSASLAPEGMGIGLSMVARLADALNTKITITSVEGRGTRVTMDISDVDPDAARRRH
>NZ_LR594691.1|WP_068684710.1|15647_17015_+|YqaJ-viral-recombinase-family-protein
MEELDRQLTADDKAEITKKVWSLVDALPQRDLIELSDARQWIGRVVELHGEQAIWHAIRLNGFGGSEIGVLVRNQHGVRADHMASAHDIVLGKLMRKVPDETNEHMTRGHENEEPHSRKFYKKYGAHRDLEAFGILSKAQGSLPWMRYSPDEVAMLPSKVLAATRPMAAERPMSRWLIDYKAPSKIEEDDEIHFQYGCQLAQGAILCEENGVEIHGLMLSQFDWAGWRLKDDVVEVGEELKHLVREAGNWAWNCVMTKQVPPYVRTPVLTDSEGFVAKHVDLAERLANVSALSKAADARAQELRAELLVGLDGRKLDGCKIVLPGAGALTANLKIDTEKLQAELKPEQLAMVTKKDGYDSAAMARHLKSLDVDLKQFKADKIDADKLAEHAESFGIDLEAYMAEQHVFKIDKPIKEEMERYIDTHFPLVAPPQAVADEQAADQFAEEPMAESPRG
>NZ_LR594691.1|WP_068684708.1|17130_17895_+|hypothetical-protein
MAIVKANTNRQSLTFISLVERTNKHLSAAEVEKNPELKVPGFLYKNPQGQHELARQLSGSVVSVKVGTDKYEPVGQPAVVYPIATVRLTDGESVKIRLDQQLGRTVIGLLAANALSHGDGPVDIYVSHVRAGDRIGNGEPFDRDRSFISVKPEGAANNMKFAPIYAGEDGQILVDGEGKPAGLPKAKTVRFQGQDRLDWEEINNIAVWTAAGLESYYKDKDAQAHTSSQAPDDHEQQNDGIDLNEAAAAAAPRG

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Crispr_ID: NZ_LR594691_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR594691_4

8281-8658

Orphan

Consensus_repeat	Method
CAGACTTCGACAAAGCTTCGACAAAGG	CRISPRCasFinder

5 spacers

The CRISPR arrays of NZ_LR594691_4

>merge|NZ_LR594691|4|8281-8658|CRISPRCasFinder
CAGACTTTGGCGAAGCTTCGACAAAGACTGGCCGATGACGCGGGGCGATCAACGTCGCGCCGCGCTCCGGGCAAGCCGCCTACAGACTTCGACAAAGCTTCGACAAAGGTTGGCCTGGTAGGCGAGGACAGCGCCGACGTATGCCGTGGGTATTCGTCAGACTTCGACAAAGTTTCGACAAAGGCTGCTTGGCCGTGAGAGGAGATCGAGGCTGCGCGCTCGCATCTATCAGACTTCGATAAGAGTTTGTCGAAGTCTGAGCGGCCGCTAGCTTCATTACCTTAGCCTTCGACAAAGCTTTGACAAAGGTTTCGGCGCGGCGCTTGGCCGACCTTTGCTGCAATCAACGTCCCGACTTCGACAAAGTCTGGCGGAAGT

>NZ_LR594691|4|4|8281-8658|CRISPRCasFinder
CAGACTTTGGCGAAGCTTCGACAAAGA	CTGGCCGATGACGCGGGGCGATCAACGTCGCGCCGCGCTCCGGGCAAGCCGCCTA
CAGACTTCGACAAAGCTTCGACAAAGG	TTGGCCTGGTAGGCGAGGACAGCGCCGACGTATGCCGTGGGTATTCGT
CAGACTTCGACAAAGTTTCGACAAAGG	CTGCTTGGCCGTGAGAGGAGATCGAGGCTGCGCGCTCGCATCTAT
CAGACTTCGATAAGAGTTTGTCGAAGT	CTGAGCGGCCGCTAGCTTCATTACCT
TAGCCTTCGACAAAGCTTTGACAAAGG	TTTCGGCGCGGCGCTTGGCCGACCTTTGCTGCAATCAACGTC
CCGACTTCGACAAAGTCTGGCGGAAGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR594691.1\|WP_083944785.1\|11292_12099_+\|type-IV-secretory-system-conjugative-DNA-transfer-family-protein	unknown	unknown	gnl\|CDD\|374893
NZ_LR594691.1\|WP_068684720.1\|10944_11283_+\|DotD/TraH-family-lipoprotein	unknown	unknown	gnl\|CDD\|379881
NZ_LR594691.1\|WP_068684722.1\|8770_10654_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594691.1\|WP_068684726.1\|6424_6997_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237057
NZ_LR594691.1\|WP_068684710.1\|15647_17015_+\|YqaJ-viral-recombinase-family-protein	unknown	unknown	gnl\|CDD\|200235
NZ_LR594691.1\|WP_068684730.1\|3212_3887_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594691.1\|WP_068684732.1\|1238_2264_+\|ParB/RepB/Spo0J-family-partition-protein	unknown	unknown	gnl\|CDD\|319262
NZ_LR594691.1\|WP_083944790.1\|78_1239_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|274585
NZ_LR594691.1\|WP_068684706.1\|18057_24114_+\|strawberry-notch-C-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|372772
NZ_LR594691.1\|WP_162487236.1\|13907_15203_-\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_LR594691.1\|WP_068684716.1\|12106_13393_+\|Flp-pilus-assembly-complex-ATPase-component-TadA	unknown	unknown	gnl\|CDD\|131576
NZ_LR594691.1\|WP_068684728.1\|4390_5812_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594691.1\|WP_068684714.1\|13389_13704_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377746
NZ_LR594691.1\|WP_068684724.1\|7008_8127_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274757
NZ_LR594691.1\|WP_068684704.1\|24172_25024_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594691.1\|WP_068684708.1\|17130_17895_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_LR594691.1\|WP_068684732.1\|1238_2264_+\|ParB/RepB/Spo0J-family-partition-protein	gnl\|CDD\|319262	cd16405, RepB_like_N, plasmid segregation replication protein B like protein, N-terminal domain. RepB, found on plasmids and secondary chromosomes, works along with repA in directing plasmid segregation, and has been shown in Rhizobium etli to require the parS centromere-like sequence for full transcriptional repression of the repABC operon, inducing plasmid incompatibility. RepA is a Walker-type ATPase that complexes with RepB to form DNA-protein complexes in the presence of ATP/ADP. RepC is an initiator protein for the plasmid. repA and repB are homologous to the parA and ParB genes of the parABS partitioning system found on primary chromosomes.	9.47789e-33
NZ_LR594691.1\|WP_083944790.1\|78_1239_+\|AAA-family-ATPase	gnl\|CDD\|274585	TIGR03453, partition_RepA, plasmid partitioning protein RepA. Members of this family are the RepA (or ParA) protein involved in replicon partitioning. All known examples occur in bacterial species with two or more replicons, on a plasmid or the smaller chromosome. Note that an apparent exception may be seen as a pseudomolecule from assembly of an incompletely sequenced genome. Members of this family belong to a larger family that also includes the enzyme cobyrinic acid a,c-diamide synthase, but assignment of that name to members of this family would be in error. [Mobile and extrachromosomal element functions, Plasmid functions].	1.55763e-65
NZ_LR594691.1\|WP_083944785.1\|11292_12099_+\|type-IV-secretory-system-conjugative-DNA-transfer-family-protein	gnl\|CDD\|374893	pfam16932, T4SS_TraI, Type IV secretory system, conjugal DNA-protein transfer. T4SS_TraI is a family of putative Gram-negative, largely Proteobacterial, type IV conjugal DNA-Protein transfer or VirB secretory pathway (IVSP) proteins.	2.03239e-47
NZ_LR594691.1\|WP_068684714.1\|13389_13704_+\|hypothetical-protein	gnl\|CDD\|377746	pfam06965, Na_H_antiport_1, Na+/H+ antiporter 1. This family contains a number of bacterial Na+/H+ antiporter 1 proteins. These are integral membrane proteins that catalyze the exchange of H+ for Na+ in a manner that is highly dependent on the pH.	0.00807552
NZ_LR594691.1\|WP_068684726.1\|6424_6997_-\|hypothetical-protein	gnl\|CDD\|237057	PRK12323, PRK12323, DNA polymerase III subunit gamma/tau.	0.001543
NZ_LR594691.1\|WP_068684716.1\|12106_13393_+\|Flp-pilus-assembly-complex-ATPase-component-TadA	gnl\|CDD\|131576	TIGR02524, ATP-binding_protein, Dot/Icm secretion system ATPase DotB. Members of this protein family are the DotB component of Dot/Icm secretion systems, as found in obligate intracellular pathogens Legionella pneumophila and Coxiella burnetii. While this system resembles type IV secretion systems and has been called a form of type IV, the liturature now seems to favor calling this the Dot/Icm system. This family is most closely related to TraJ proteins of plasmid transfer, rather than to proteins of other type IV secretion systems.	1.40941e-54
NZ_LR594691.1\|WP_162487236.1\|13907_15203_-\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	6.9126e-39
NZ_LR594691.1\|WP_068684720.1\|10944_11283_+\|DotD/TraH-family-lipoprotein	gnl\|CDD\|379881	pfam16816, DotD, DotD protein. The DotD protein is a component of the Dot/Icm type IVB secretion system. It is involved in the outer membrane targeting of DotH.	3.35023e-15
NZ_LR594691.1\|WP_068684724.1\|7008_8127_-\|hypothetical-protein	gnl\|CDD\|274757	TIGR03739, PRTRC_D, PRTRC system protein D. A novel genetic system characterized by six major proteins, included a ParB homolog and a ThiF homolog, is designated PRTRC, or ParB-Related,ThiF-Related Cassette. It is often found on plasmids. This protein family is designated PRTRC system protein D. The gray zone, between trusted and noise, includes proteins found in the same genomes as other proteins of the PRTRC systems, but not in the same contiguous gene region.	3.45379e-38
NZ_LR594691.1\|WP_068684706.1\|18057_24114_+\|strawberry-notch-C-terminal-domain-containing-protein	gnl\|CDD\|372772	pfam13872, AAA_34, P-loop containing NTP hydrolase pore-1.	1.54087e-09
NZ_LR594691.1\|WP_068684710.1\|15647_17015_+\|YqaJ-viral-recombinase-family-protein	gnl\|CDD\|200235	TIGR03033, hypothetical_protein, putative phage-type endonuclease. Members of this protein family are found often in phage genomes and in prokaryotic genomes in uncharacterized regions that resemble integrated prophage regions.	0.000700111

>NZ_LR594691.1|WP_068684724.1|7008_8127_-|hypothetical-protein
MSNASGAPIVAAIDLGYGLTKFTRRNAASGAVEYDLFPSVAFGVDRRRYELEERRSEDVKVVAYNGESFVVGPDVMSRAASSSDFGRHLDDKYYESAPYHALMRGALAYMDEDHLDVLVLGLPVSHFRDPGKPAALKKAYTGKISLDGERSMVIDKVIVRPQPMGGFYSLDRQIDGINATIARFPQSGLKPLADWNQLVDTMTVVTVDPGEYTLDWLLVNHGKPNTDVSGAAGDAGRHRVMVSVKEHLEAKLGRAIAPTNLTRLNNSLRTGAVFKLDGRAIDMKDPEILAAARRAVRDPVSIMMNGIKGAWDIIDMVVMVGGHPSHYAEEIAERMPDMPIYVPKHSVFSNVEGLQLIGEGIAQAEARVAEAA
>NZ_LR594691.1|WP_068684726.1|6424_6997_-|hypothetical-protein
MSVNDNIMDIRVRFHRDESPMLFRALSGMESAPGVRTRNQFVRQLIEMGLLMMEERMRRQDGVPIRVSSGLTDEVTASAVAMARTSGLPAAIQATPETRAAAGIDQVAPIVPAQATSLPTSVVTSPSWTETESARPRPHQATAPPSQIAQQISPAAVRAPAALPVGDDDRPPPRVGAVRPVRMLDGESFE
>NZ_LR594691.1|WP_068684728.1|4390_5812_-|hypothetical-protein
MSSNPDVNPEFDPNSNRREPDLPESLDAANTDSSADGALANEDFRPAESLSNWFEQAVQPVAPQTAKAYLRNYRMMVDRAAAALNLDPDFVTIEDLLAQLRDDTTITPGTKNTYAAAITWALKQPDFDFSPAVRTQGLALVSDFDPSGGAAQEIIRNTRVSGRTIPQEDLGPLLNALLGARVTQQAWATKTTSWLNAGIATGARPGEWESAYWFDRDRRILRLPNAKLKKQAPFRWQHIPERLLNRADADLVSMAEADRENISSVVSAAKRHSELLARNLAFFDQAEAGTDASNAEGIDTLRRLRAWELHNAGLAWRDIEVPVRWVGAVDAHLTNLQQYLSSAPGKHGPPTFERYYDGCRAALRTACLEAFPDKRLYSLYDTRSTAAANMQATIGPEAAAAVMGHYMKRKRTIKANYAGADRAYRGAGRFAPGLADTQNQRDQAADRAAPQLPMESGGTGDSPEAPTGPLLVE
>NZ_LR594691.1|WP_068684730.1|3212_3887_-|hypothetical-protein
MMHRHQAPTESSLKKWSAAGEFDACVAADQAAAAALAPEPRAFTREEMLRRGKRAGRPGLRLNTRSAISRVYELWPHLADTGSQALLDLAVARVAEGLQSRLAQIAPAGHPPSPATAPAPAAPVVRAVDPTPTAELTLQELDRKMTAMFKELVEVKRELVQFAALRNNLITKLDDAVARTQEAMAATGSRVSGGPDPLVEARRDRDIGVVKSMLTEILEALCKK
>NZ_LR594691.1|WP_068684732.1|1238_2264_+|ParB/RepB/Spo0J-family-partition-protein
MARNLMEKSQKIQVPEARSASTPQTPPSKPKTAPGTLMGFMEGQSTVHQENKVLRDRAEEAERVAEEFKGATPVKMLDPKRIRRSDWANRDPASFDGLTWDEFKDDILKNGGNEVPIRVRPLPDAVEGCEFEIIYGHRRHQACLELGLPIRAQVEDATEHMLFVAMELENRSRKDLSPWEQGMFYAKALDKGLYPSARKLAEAIRRDSSGVNKALGIARLPTAVVEAFASPLEIQYRWAQPLHEAHQSDPDGLLARAKAIAAYGRRQAPGAVFAQLVSPKVPSDGKSRTTADIEIGKVGRKATAVLTSDRKGRAILKFQVDLPAKKRQALAAYAERLLLED
>NZ_LR594691.1|WP_083944790.1|78_1239_+|AAA-family-ATPase
MMGKIRSAMLAPTARKSAPTFNLSQLSALCGAERGSILHRLSKGGLPSGNLNPSGSRREFTLAESREWIREYRKEQRRPQGAEAVTISVGNFKGGVTKTTTAVTLAQGLSLRGHRVLMIDVDPQGSATTLFGILPDTEVEEDQTVLGLALGTESSIRYAIRPTYWDGIDIVAAAPLLFGGEFALPARQSRDPEFEFWSVLDLAIDDVRSEYDVIIIDTPPALSYMTIAAFMASDGIIIPLPPNPLDFASAAQFWNLFSDIAQGFKAQRGYDKNFAFMHILLARVDSSDSASNVVRQWIGQTYAEKVLPVEIPKTAVASSSSAEFGTVYDVAKYDGNARTFKRARDAYDTFVEYVEGSVREVWDTQVEEGANAAPVKPVSSVIEGVA
>NZ_LR594691.1|WP_068684722.1|8770_10654_+|hypothetical-protein
MINSKGDRYCYLNARHTLETVGETGDAGFFSKLHHLLINGNQGKGPPKQWASMIRALQTKGVKRSELEDSKILESLEASVDKSLTKEQVAGLVLSGLPTVKELELASPRYASWRHPGGNYKELLYVLNSQRDNVQDELSELEYRLEAMQYDAADLAFSLESLMDDPELPSRMQAQMKALRDLLPKAWDYATPHFRDALDGTVDKNIMAHARITERGELFFVEEIQSDWAQAGGKASRAAAREAVIRLLMARLGEGASHSDRTLLENAIRSKASVELRGVKYDPKDPEMIAAAEEGRKAGWSGNTPAAPFITNTEEWSGLILRRLMQRAAAIPAVNQFAWITQSMRNGGRAGGGASLDDFYKNILPKLADKLLKPLGAKVTMGQVSLNGTMHDVPQFEMTPAVKEALRGPMPLYSMSPVWKGARNGQAEVNRVLAECELMMGTARHVKLMDALYDIATHRQVAGKYINNGILLNLHAQNLDRAARHEAWHFATENMLTVEERVAMQREFASHKPLARRTQQTLIELGEIEAARQCSHPEECAAHAFALWTSGEMEITEPAPKGLFQEVWAVLKDCGRWLAERVSGEKAVTTESMFEALRTGELAKMRHSRARGPQEMDIEHRAPRMVA
>NZ_LR594691.1|WP_068684720.1|10944_11283_+|DotD/TraH-family-lipoprotein
MAVQLDRLFQKSANQAAFTGSADAKAPAPRMADGKLWVTWRGDANDLLKNLEPVTGQKVSVTGPTPRLPLYVQVHALGVPVDEVMRDIGYQLGQRADLVLLPSGVEIRYRAF
>NZ_LR594691.1|WP_083944785.1|11292_12099_+|type-IV-secretory-system-conjugative-DNA-transfer-family-protein
MTRTTPSLRITFAVMALALAAAQAASAQTQSLSIDSLMNAQGATESESRLSMVRETALRETAFGLGTRLGLLQRSREIAAEVAKRDRELDKRFDFGGLMMGPGVLPPVIMESHDAISLEATTMRVSGAIYKIEEPARFVAIAPTWRDWLLLGLPNEDAADMSAVKSLLPRDSAEQAFWKKEVAQAVATGRAQAQQIFDLNVANLEKTYFGMRLFYDLWKRGMVTIPVVASAQTMVDHENPNTISVGNTMFRITRQAGFEDSSRWKPLE
>NZ_LR594691.1|WP_068684716.1|12106_13393_+|Flp-pilus-assembly-complex-ATPase-component-TadA
MLDAAEKAIPRFHLPIGNIRRQDLNEFLSNVYDLGVSDIKFSSTDYVWAEVNRMWQPVTDRRLDDSEVNTILALLFNESGQTEIGAANAIDSRVDAVISRDKVVSFRLNATGCSVGNTPSGVNITLRAMPQQIPTCAQLGLEPELMDNLFPRYGMVLIVGTTGSGKSTLLAAAHRYRLEERRDDPVHILTYEQPVEYLLKGYAEGFMPEPTQTEVGMGAQLRSMDMVGPNAMRRKGQVIQMGEIRDMDSARAGFELGATGHAAYATMHTETPDRALSRTLQLFPPVEHARVANEFIEQARLVIAQKLARRLDGKVIAFRSWCVFDREVKRSIEDLPTHQWGSEVRKLVAKRGNDFESKAFAALADGLISYESFVEVSSMTRGEANEYCAHRGFNPNAGPVVTSLPTELPVATQNAAPKNEAIVEAEAA
>NZ_LR594691.1|WP_068684714.1|13389_13704_+|hypothetical-protein
MSSSYWPRTGKSYRIPGTPLPPQAGAPMVLALFYFSWWTLAIAFAVCAVFGYASYKNRTILWALRRLRSKMRSGVIAARPRFYRQRFTFDQQLADIDFREWGKK
>NZ_LR594691.1|WP_162487236.1|13907_15203_-|HAMP-domain-containing-histidine-kinase
MNRYVWESRRRMPAGLLICFAMAAMAVGAGIPYWQALLWLGLVLLGNGVRFAAERKCSRSLLEASAQTRTEYLKRFAPIYPFVATVWGCSTLLFFGRTSSLHQFASWFLVARMLYAPMPTFSLIPIIFRLYASFFFVSTLLCISYLVWGDSSRTALLWVIPVGLAQLILTLRVSRDTHRAQAEQYGLIFDLAAQKHAADDKVKSKNRSFAAAAHDMRQPVIALSLYAEHLESHPESHVEVGPKIARASAAVSKLFNSLFDLAHFDTCEVKLSVEPVRISEVIAGLVETQKQEAEAAGIELRVRVKDALLQTDPTRLRRMIANVISNSIRYSKPGTKILLASRVHRGKLRVEVWDQGIGIAPANLPHVFSEFYRVESSASLAPEGMGIGLSMVARLADALNTKITITSVEGRGTRVTMDISDVDPDAARRRH
>NZ_LR594691.1|WP_068684710.1|15647_17015_+|YqaJ-viral-recombinase-family-protein
MEELDRQLTADDKAEITKKVWSLVDALPQRDLIELSDARQWIGRVVELHGEQAIWHAIRLNGFGGSEIGVLVRNQHGVRADHMASAHDIVLGKLMRKVPDETNEHMTRGHENEEPHSRKFYKKYGAHRDLEAFGILSKAQGSLPWMRYSPDEVAMLPSKVLAATRPMAAERPMSRWLIDYKAPSKIEEDDEIHFQYGCQLAQGAILCEENGVEIHGLMLSQFDWAGWRLKDDVVEVGEELKHLVREAGNWAWNCVMTKQVPPYVRTPVLTDSEGFVAKHVDLAERLANVSALSKAADARAQELRAELLVGLDGRKLDGCKIVLPGAGALTANLKIDTEKLQAELKPEQLAMVTKKDGYDSAAMARHLKSLDVDLKQFKADKIDADKLAEHAESFGIDLEAYMAEQHVFKIDKPIKEEMERYIDTHFPLVAPPQAVADEQAADQFAEEPMAESPRG
>NZ_LR594691.1|WP_068684708.1|17130_17895_+|hypothetical-protein
MAIVKANTNRQSLTFISLVERTNKHLSAAEVEKNPELKVPGFLYKNPQGQHELARQLSGSVVSVKVGTDKYEPVGQPAVVYPIATVRLTDGESVKIRLDQQLGRTVIGLLAANALSHGDGPVDIYVSHVRAGDRIGNGEPFDRDRSFISVKPEGAANNMKFAPIYAGEDGQILVDGEGKPAGLPKAKTVRFQGQDRLDWEEINNIAVWTAAGLESYYKDKDAQAHTSSQAPDDHEQQNDGIDLNEAAAAAAPRG
>NZ_LR594691.1|WP_068684706.1|18057_24114_+|strawberry-notch-C-terminal-domain-containing-protein
MPKWIDLNDASGARLKIATIEVGGDPHLHLFVTGLSYLNPAWNKAIQQLGFHAGGARKYLVRRVKAGERPKPSDFRPVFPNAAVREMAPESYMLNLQTARKPDERPASKEERAAAIDINNAVLLGRNSDGERVFEAAGSRYVVKVTGQGAELRVDESESSQPHVFLRLPKDATDEFRTLSMVQCADGFVRSMVLGEVQHTEDMDRFLQALHGTVSADQPVSFTTEQHDEVHAAIETALLRYLRDGFEVAQDAYGESARLTDMLPPYRGRLRGTGTMPAPISVASQRLLGDTEGLTVVVPNAFDGASFAFLPEGTNVRAYRGTKDMSALSSVVNLRASTEWQDGEFSPGREVGADAMFINADPVLGADGRRTDYMLAINSLRSLKEGGRAVIVLAADAVPGELSVASRNFLQMVNERYQIQSAFETAPILSRKAGVPDNNPGLRVVSVVNRRVDLPTPITTLPVISSWDDLKTTVDEAMARAEVLDAQAQGVDVERAALEGRVQRPYIAFSRVGEARTMVPSNMQAPLQATMTRIESLYGQIDELVTRELGWGENALAKRLSPEQVDGIAMMVVRQLEGYASILADETGIGKGRQLAAMMAWALRRNQPVFFVTDKANLFSDLARDLKAIGEWDRVRPMVMNTDGEITWEPGPGEPPLVLAQGFASARTKAMVDGGMKLEEAGLNTCFLTYSQIAGAESDKAQWVKNQLGNALIIFDEAHVAAGSDSQIASHIAEMARLAKGVQYASATWSKTEDNLHIYQRALPDSVNVASLAAAIKKGGESFSEVLSSMLASEGALIRREHDLSKLDVSVYTVEERRAHNERVSDAVAEALGAATYLAGDMSQIFMRGNREAVSVLRKAKEARAAMVDQTNAAAETPVARANIMSSSFGTGSVLYQVMKAVQGALNADQVADRAIEHIRAGLKPVIVSEATNEALTRMLMLEADVQAEANGAAPRTAGGLPSAIKMPTIRDAVRAVLMPRLTTVVQREITEEDVPDEPEEAPALADAAARAAAELNAEGEDAEEGAQTAPTAEMVAAQREARILRNLQRQTEGEQAAAEEDAVSLDEALAAAAPADTAPGEGGEAGERGKKVISGRRTVSILDLPDMTDADRQHFRDGVAELERLINAIPELPVSAFDVIEQKLRDAGITVGEITGRSFSLERMPASAAEPADGQAAGNPVSTATVPTTDRLDGAPMWKVTPRLRSKRAVNAVKRAFNNGEIQALLINRSAATGASMHASPQFLDRSRRVLLEHQIPENVTDRIQLIGRVNRYDQVTFPLVETCTTGIYGELRYVMMQNRKLEKMSANVRSSRENAMLIKDVPDLFNSIGLEAVRSYVQDEPLVAKKLALPENFLEITGVAAVNMFLMRLPLLKVAEQRQVYDQLFNRFDESFNRHELLGTNPLKTREFDWRAKEEFSGVFFGDTSGERENMVEALINEALTTAEAGEPATDAAPAPTGDTTMDVSALAAGGQPDGAASDQDDLLSAFDRPVYIKKIAYNVDLKPMSWTACVAAATVSGELLAAEGGHFELDENGKASWKQDVVAKLNSGMQAIVKMAAVAAGLTDTNEAVLTNPPAQRAHLRADWLKNHVAGLVPGGIFQEDAKVDSNGVVYQQAKTGVIVNMKLPTEVRELILPHKWKIAVVFPGEERPVEYSLRALLSEVRGDVKKGEVAGTLMTNAYSRLRPVNYQRGTEQGWRFANVLGEANPRISWTRDEFDLAPVGQHRRSGYVLGGNMYMAYDWSVKSRVGRSIIYTDDKGMRQRGVLLPATMSHVGAQFMPMRVWGGQIKPFVKKLVEAQGVNGLQLETEFLSSNKPYGIMINDKGLMLLTKARDARRALRLMRGEQVKMRKEALGERATAARDPLNVTLGVLSRNGRLGTGRAAAGLNGRVALGDEATAGSATGIPQGYVAVKLGFDPTKPAMLDRALSLLVHGTGLEIYAKGMQQRALAKEVGREYFAQIREETAQRRAQVRQQIAAAAAGAPVVPHLEQEAPAEEGAEAEVPAANDESNAERAAA
>NZ_LR594691.1|WP_068684704.1|24172_25024_+|hypothetical-protein
MTLQAIELSPAECDELLASLSGSAPSVAEWRAVVQKAFAKGLAAASPKDSMPAVLVEPLIDIAETIAREQLVPAGDSRGRYEQYAQWAKEFQESFSRRLAAGEEPHSSYYEDIEAFTLKKVAVSGFVSMKRPVPATAVERSVFREYAMAGQKEGELEVDANAKVNISRDDPDLPPQGAYIECWTYVSNDEISGFLTRMMKDAQLDAETLDEAVHFAAARSVSTRPREEDMDLISMKASDVNNDGVDTQIQYLVARVGPEAAFQAVEAAISAAQEENEQPAPRG

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Crispr_ID: NZ_LR594691_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR594691_5

266069-266150

Orphan

Consensus_repeat	Method
GCGCAGGAAAAGCCCGCGCCCGCCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LR594691_5

>merge|NZ_LR594691|5|266069-266150|CRISPRCasFinder
GCGCAGGAAAAGCCCGCGCCCGCCAAACCCGCAATGAACATGGACATGGGAAAACCGGCCCAGGAAAAGCCCGCGCCCGCCA

>NZ_LR594691|5|5|266069-266150|CRISPRCasFinder
GCGCAGGAAAAGCCCGCGCCCGCCA	AACCCGCAATGAACATGGACATGGGAAAACCG
GCCCAGGAAAAGCCCGCGCCCGCCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR594691.1\|WP_068678274.1\|277970_279794_+\|glycoside-hydrolase-family-15-protein	unknown	unknown	gnl\|CDD\|225922
NZ_LR594691.1\|WP_083944411.1\|256966_257491_-\|metal-binding-protein	unknown	unknown	gnl\|CDD\|225564
NZ_LR594691.1\|WP_068678275.1\|280722_281814_+\|transaldolase	unknown	unknown	gnl\|CDD\|235117
NZ_LR594691.1\|WP_083944414.1\|271382_275387_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225990
NZ_LR594691.1\|WP_068678266.1\|263886_264636_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594691.1\|WP_068678294.1\|280006_280726_+\|HAD-family-hydrolase	unknown	unknown	gnl\|CDD\|366257
NZ_LR594691.1\|WP_102906077.1\|268548_270498_+\|copper-resistance-system-multicopper-oxidase	unknown	unknown	gnl\|CDD\|273649
NZ_LR594691.1\|WP_068678269.1\|266740_267775_+\|alcohol-dehydrogenase-AdhP	unknown	unknown	gnl\|CDD\|176257
NZ_LR594691.1\|WP_068678272.1\|275442_276477_+\|decarboxylating-6-phosphogluconate-dehydrogenase	unknown	unknown	gnl\|CDD\|236582
NZ_LR594691.1\|WP_146039437.1\|261808_263884_+\|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|99813
NZ_LR594691.1\|WP_083944419.1\|257516_257951_-\|DUF1622-domain-containing-protein	unknown	unknown	gnl\|CDD\|377914
NZ_LR594691.1\|WP_068678267.1\|264637_265495_+\|cytochrome-c3-family-protein	unknown	unknown	gnl\|CDD\|173979
NZ_LR594691.1\|WP_146039439.1\|259269_259653_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594691.1\|WP_068678264.1\|258047_258380_+\|copper-binding-protein	unknown	unknown	gnl\|CDD\|378683
NZ_LR594691.1\|WP_068678273.1\|276559_277966_+\|glucose-6-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|237233
NZ_LR594691.1\|WP_068678265.1\|261043_261682_+\|periplasmic-heavy-metal-sensor	unknown	unknown	gnl\|CDD\|379377
NZ_LR594691.1\|WP_146039438.1\|260438_260741_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594691.1\|WP_068678292.1\|268243_268552_+\|four-helix-bundle-copper-binding-protein	unknown	unknown	gnl\|CDD\|153434
NZ_LR594691.1\|WP_146039440.1\|258959_259277_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594691.1\|WP_068678270.1\|270494_271262_+\|copper-resistance-protein-B	unknown	unknown	gnl\|CDD\|377498

Protein	Function_ID	Function_description	E-value
NZ_LR594691.1\|WP_068678274.1\|277970_279794_+\|glycoside-hydrolase-family-15-protein	gnl\|CDD\|225922	COG3387, SGA1, Glucoamylase and related glycosyl hydrolases [Carbohydrate transport and metabolism].	8.27006e-136
NZ_LR594691.1\|WP_146039437.1\|261808_263884_+\|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein	gnl\|CDD\|99813	cd06217, FNR_iron_sulfur_binding_3, Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an iron-sulfur binding cluster domain. Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme that catalyzes the reversible electron transfer between NADP(H) and electron carrier proteins such as ferredoxin and flavodoxin. Isoforms of these flavoproteins (i.e. having a non-covalently bound FAD as a prosthetic group) are present in chloroplasts, mitochondria, and bacteria in which they participate in a wide variety of redox metabolic pathways. The C-terminal domain contains most of the NADP(H) binding residues and the N-terminal domain interacts non-covalently with the isoalloxazine rings of the flavin molecule which lies largely in a large gap between the two domains. Ferredoxin-NADP+ reductase first accepts one electron from reduced ferredoxin to form a flavin semiquinone intermediate. The enzyme then accepts a second electron to form FADH2 which then transfers two electrons and a proton to NADP+ to form NADPH.	4.22108e-88
NZ_LR594691.1\|WP_068678275.1\|280722_281814_+\|transaldolase	gnl\|CDD\|235117	PRK03343, PRK03343, transaldolase; Validated.	0
NZ_LR594691.1\|WP_083944414.1\|271382_275387_+\|hypothetical-protein	gnl\|CDD\|225990	COG3459, COG3459, Cellobiose phosphorylase [Carbohydrate transport and metabolism].	0
NZ_LR594691.1\|WP_068678294.1\|280006_280726_+\|HAD-family-hydrolase	gnl\|CDD\|366257	pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase. This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria.	2.62848e-08
NZ_LR594691.1\|WP_102906077.1\|268548_270498_+\|copper-resistance-system-multicopper-oxidase	gnl\|CDD\|273649	TIGR01480, unnamed_protein_product, copper-resistance protein, CopA family. This model represents the CopA copper resistance protein family. CopA is related to laccase (benzenediol:oxygen oxidoreductase) and L-ascorbate oxidase, both copper-containing enzymes. Most members have a typical TAT (twin-arginine translocation) signal sequence with an Arg-Arg pair. Twin-arginine translocation is observed for a large number of periplasmic proteins that cross the inner membrane with metal-containing cofactors already bound. The combination of copper-binding sites and TAT translocation motif suggests a mechansism of resistance by packaging and export. [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds].	0
NZ_LR594691.1\|WP_068678269.1\|266740_267775_+\|alcohol-dehydrogenase-AdhP	gnl\|CDD\|176257	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	5.19455e-178
NZ_LR594691.1\|WP_068678272.1\|275442_276477_+\|decarboxylating-6-phosphogluconate-dehydrogenase	gnl\|CDD\|236582	PRK09599, PRK09599, NADP-dependent phosphogluconate dehydrogenase.	0
NZ_LR594691.1\|WP_083944411.1\|256966_257491_-\|metal-binding-protein	gnl\|CDD\|225564	COG3019, COG3019, Predicted metal-binding protein [General function prediction only].	2.64266e-48
NZ_LR594691.1\|WP_083944419.1\|257516_257951_-\|DUF1622-domain-containing-protein	gnl\|CDD\|377914	pfam07784, DUF1622, Protein of unknown function (DUF1622). This is a family of 14 highly conserved sequences, from hypothetical proteins expressed by both bacterial and archaeal species.	1.01368e-24
NZ_LR594691.1\|WP_068678267.1\|264637_265495_+\|cytochrome-c3-family-protein	gnl\|CDD\|173979	cd08168, Cytochrom_C3, Heme-binding domain of the class III cytochrome C family and related proteins. This alignment models heme binding core motifs as encountered in the cytochrome C3 family and related proteins. Cytochrome C3 is a tetraheme protein found in sulfate-reducing bacteria which use either thiosulfate or sulfate as the ultimate electron acceptors. C3 is an integral part of a complex electron transfer chain. The model also contains triheme cytochromes C7 which function in electron transfer during Fe(III) respiration by Geobacter sulfurreducens (PpcA, PpcB, PpcC, PpcD, and PpcE) and four repeated core motifs as found in the 16-heme cytochrome C HmcA of Desulfovibrio vulgaris Hildenborough which plays a role in electron transfer through the membrane following periplasmic oxidation of hydrogen (resulting in sulfate reduction in the cytoplasm).	0.000139481
NZ_LR594691.1\|WP_068678264.1\|258047_258380_+\|copper-binding-protein	gnl\|CDD\|378683	pfam11604, CusF_Ec, Copper binding periplasmic protein CusF. CusF is a periplasmic protein involved in copper and silver resistance in Escherichia coil. CusF forms a five-stranded beta-barrel OB fold. Cu(I) binds to H36, M47 and M49 which are conserved residues in the protein.	5.71401e-18
NZ_LR594691.1\|WP_068678273.1\|276559_277966_+\|glucose-6-phosphate-dehydrogenase	gnl\|CDD\|237233	PRK12853, PRK12853, glucose-6-phosphate dehydrogenase.	0
NZ_LR594691.1\|WP_068678265.1\|261043_261682_+\|periplasmic-heavy-metal-sensor	gnl\|CDD\|379377	pfam13801, Metal_resist, Heavy-metal resistance. This is a metal-binding protein which is involved in resistance to heavy-metal ions. The protein forms a four-helix hooked hairpin, consisting of two long alpha helices each flanked by a shorter alpha helix. It binds a metal ion in a type-2 like centre. It contains two copies of an LTXXQ motif.	1.41088e-06
NZ_LR594691.1\|WP_068678292.1\|268243_268552_+\|four-helix-bundle-copper-binding-protein	gnl\|CDD\|153434	cd08026, DUF326, Cysteine-rich 4 helical bundle widely conserved in bacteria. This functionally uncharacterized protein forms a 4-helical bundle with a bromodomain-like topology. It is present in major bacterial lineages and contains highly conserved cysteines in a repeated pattern, whose sidechains appear buried. Some family members have been (mis)annotated as putative ferredoxins.	4.63539e-23
NZ_LR594691.1\|WP_068678270.1\|270494_271262_+\|copper-resistance-protein-B	gnl\|CDD\|377498	pfam05275, CopB, Copper resistance protein B precursor (CopB). This family consists of several bacterial copper resistance proteins. Copper is essential and serves as cofactor for more than 30 enzymes yet a surplus of copper is toxic and leads to radical formation and oxidation of biomolecules. Therefore, copper homeostasis is a key requisite for every organism. CopB serves to extrude copper when it approaches toxic levels.	5.01586e-107

>NZ_LR594691.1|WP_068678267.1|264637_265495_+|cytochrome-c3-family-protein
MSKAKLIIAALTAIVAIGVSVDWTKSDSKTRTLWQQAVAPGMLSQSHTFLSNNCAACHTPVKGVEPKLCIACHADNTALLQRQPTVFHANVQVCIGCHVEHQGTARMPTTMDHALLARTGHRDMKAAGPDVGPSAPDVEAVANLLNRLPRQEAKTPPPAAPYAEVKQPDKPTLPLNHPRLGADESMLNCVSCHATKDRHQGFFGTDCVQCHATTQWTIAEFLHPSARSTECAQCHKPPPSHNMMHFSMMSAPLAKQPNAKVNQCFLCHQTTVWNDIKGLGWKKVH
>NZ_LR594691.1|WP_068678266.1|263886_264636_+|hypothetical-protein
MKWPEREGIVVTGVLSVLLLAWLGFFLHRSPRFPGSGLGAVFGIAGAVLMLVPLAYPMAKRISWLNARITPRVSMKTLLTLHVYAGLLGPLLAIIHTGHKFDSWLGTTLTATMLLVVLSGFAVRYLLTFVAHEMKDKLALLQTARGDLDNAWWKLENSPAEMRVLPRAPVLTAAMASLGLDVRPAGPAGEVTRIAESVADLEYSVRMHEFFKRWFGRSLKLHIVLSVILYVLLALHIGAGVQYGLRWFS
>NZ_LR594691.1|WP_146039437.1|261808_263884_+|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein
MSGPIKRIACLALMGSLLIGNSPAAAQSKETEHESHHPGAAQPSNPDPSPSAASAGAPMAGASAPAQAPPAMSAQPDAKQGMMGGMQKMMEGMMGSEGCCGGGAGKEIYPFLMSLPTLTPEKRAEVRRLSEERIYEGTMLLQTAQERLSTAIAAGDHDTAESALQQSRDGLGRVGSGVAVHKLLQEGTPPQNVASQWFKSETNLASPIAREDSRKVLGVLPLHLFVMALLIAFALAMVAMYFFKMRRTAALFGRIEPNPGAPPPGTSPPLGGAPNPSSPAGPPAGTTTPTGGTPPAGDAPPTGKASPPVGPPSQPSAPASAAKPAAATALPIEAPQANVASVPNAKWRGQLRIGSIITETPSVKTLRLQPVSGDGPMPFIFAPGQFLNVAFSVGGARMNRSYTISSSPTQRDHVDLTVKREPRGAVSRHVDDVLKVGDQIEAGGPVGKSTFTGTEADSVVLIAGGVGITPMMSIARYLTERSWPGDIFLVYACRAPVDFIFARDVAELQRVNKKLHVAVAMEHPEGTEWQGLRGRLTKELLAQTVPDIASRRIHLCGPPVMMDAVKAILTELKVPPDQVKTESFGSAAPTPGAAGTTAKSTAPATGPLVTFSKNNKSSKIHVDQTVLELSEELDIGIEFSCRVGTCGICKVKMTSGEVEMAVEDGLDPEDKANGMILACQAKPTGPVTVEA
>NZ_LR594691.1|WP_068678265.1|261043_261682_+|periplasmic-heavy-metal-sensor
MMDDMDKMEKKGGMGDGMMKGNMPSDGPMPSTNSSGSMQDPMAAPSSSDMMGRMRGSMPARRGMGNMAPSASLPGFPGASHLYHVGATGFFLDHPQHITLSTEQQTALNRIKEKTLLDRTSSDRRLEDAEQELWMLTAADTPDAAKIEAKVRAIEKLRGDQRVAFIRAVGEAAKVLTSDQQKALLGTKPSGPSPATGKPAQTPAMPAPMKME
>NZ_LR594691.1|WP_146039438.1|260438_260741_+|hypothetical-protein
MKQLLYVSSAIAITIAAIPAYAQQPAATMPTPANSATVPSGCGKAPMKRHNHVDAQGFGISSGSKATGAPCGPGNSASASGEKVKKKPSHNHAQFHKNQP
>NZ_LR594691.1|WP_146039439.1|259269_259653_+|hypothetical-protein
MTKRIALLRGLAMAASAGTLLIAAGCASRPPEDSALRPARSERTVSELDHGAIAAEYERQAAIDAATAKRHFGYAITYRRNRTPASGVEVHETLARHCENLARTYEQAANENLHIAGIHRQLARTAN
>NZ_LR594691.1|WP_146039440.1|258959_259277_+|hypothetical-protein
MLKALSELSCHMAAGATRILQRRRGRDCGVPHQPWIQPERKDYSGVLSGEGSYSPSTSLSIDICQCSFQRLYDSWRIVHFFSAIEGSATPSAARSIKNFKGNHDD
>NZ_LR594691.1|WP_068678264.1|258047_258380_+|copper-binding-protein
MKSTVLAAAIFSLSTILATDALAQRHDDPGRQHGVVRTSGIGVITSIDAQGKKITLEHETIDKLKMPSATHEFKLKNNQTLGKFKEGDKVAFELEKTGSNLTVVRLRQRN
>NZ_LR594691.1|WP_083944419.1|257516_257951_-|DUF1622-domain-containing-protein
MNTFREVMEWVGLGFDATGVLVIAGGVLIAAGRLAAGASGTKAMGVRRFRQDFGGAIVLGLEFLVAGDIIRTVVVAPTLENVAVLAIIVLIRTVLSMALQVEIEGRWPWQRHDADARGHTQSQPSTTVDTDVAGQRARIKRDRN
>NZ_LR594691.1|WP_083944411.1|256966_257491_-|metal-binding-protein
MKKNPEPFIDGIEVPRRVPALHAERRRRQLLVLLPLFALPAAWARSQTNGGFVEVWKSPTCGCCEDWVAHLESNGFKMRTHDAGNTDARQRLEMPPRYGACHSASIAGYAIEGHVPAREIRRLLNERPVAIGLAVQAMPIGSRGMDGLAYGPRKDAYEVVLVAKNGSASTYQRY
>NZ_LR594691.1|WP_068678269.1|266740_267775_+|alcohol-dehydrogenase-AdhP
MERKMQAAIVEQFGKPLVLREWDIPSPGAGQILVKTEACGVCHTDLHAARGDWPVKPTLPFIPGHEGIGLVAAVGSGVNSVREGDRVGVPWLYSACGHCEYCLAAWETVCAQAQFGGYTKNGGFAEYILADPNYVAHVPSGLAAKDAAPIICAGITTYKGIKETAAKPGEWIAISGVGGLGHLAIQYAKVMGLHVCAVDIDDGKLAHAKLLGADVMINAKAGDPAAAVKKETGGGAHGVLITAPSLAAFKQGVGMTRKRGTCVLVGLPPGEFPVPLFDVVANCITVRGSFVGTRRDMAEALAFAAEGKVKADIELQPLSEINRIFERLEHGDVPSRVVLEFASG
>NZ_LR594691.1|WP_068678292.1|268243_268552_+|four-helix-bundle-copper-binding-protein
MQDAIKACLDCHSMCLRMAMGYCLERGGRHVEQKHLRLMLNCAELCQTSANFMLSDSPLHGRVCLICAEACEACAKSCEQVGDMRECVEECQRCAKSCRTMT
>NZ_LR594691.1|WP_102906077.1|268548_270498_+|copper-resistance-system-multicopper-oxidase
MNPRRRFLRASAAAGAGTALHALSPSYTWAAADRTLPLQESSGTVSNLVIAKGRLDIDGHSATPTVVNGLLPGPVLRFREGETATIRVTNQLEETSSIHWHGLLVPPDMDGVPGVSFPGIRPGETFTYQYKLRQSGTYWYHSHSGNQEQAGLYGPFIIDPATRDPFAYDSECVVMLSDWTFEDPARVLAKMKKFGSYYNYNRRTMADVFRDASRNGWRATIADRMEWAKMRMDPTDIADVTGSTYTYLLNGQAANQNWTALFKPGERIRMRFINAGAMTHFDVRIPGLEMTLVQADGQNVEPVAVEEFRIAPAESYDVIVQPRAAEAYTIFAEAMDRSGYAAGTLALRSGLRAPIPERRVRPLRTMADMGMSGDAMGAMSMPASGGRPASDAMPGMAMPADAAPAKPKMDAMPGMAMPADAAPAKPKMDAMPGMAMPADTAPAKPKMDAMPGMAMPAGTAPAKATTKQAEPHGPDRHGPGNSTIAEMPASRVNDPGTGLGDAGRRVLVYSDLRRLSTGGREGVPEREIELHLTGNMERQIWGFDGKKYSEAEEPIPFDYGERLRVTFVNDTMMDHPMHLHGMWMVLENGAGAKRPLKHTINVKAGERLSFDVEPDELGKWAFHCHLLFHMELGMLRVVSVVDPKAKGRT
>NZ_LR594691.1|WP_068678270.1|270494_271262_+|copper-resistance-protein-B
MKRSSNTKRALRHAGVLLSCTMLPLAEAQTLPPPIEDSPIRSYFLFDQFEHTTARFAGGGKGSDALRFNTLGWIGGDYNRLWIYTEGTKPYNGKMEDLDVQLLYGRLVAPFWDLQAGVRYFKPRSDGPSRTYAVFGVQGLAPYRFGVQAAAFVSERGEVSGRAELEYELLLTQRWILQPRFATNIAVQEVREMGIGRGVNDVELGLRLRYEIKREFAPYIGVSWQKRFGGAAKFARERGEDVSGWRVVAGVRVWF
>NZ_LR594691.1|WP_083944414.1|271382_275387_+|hypothetical-protein
MRRDAEKDRVTRRAFRRSSSLVVCLLGSLMNSVNRNAPLRIAGGQDTLVPQVQLLSNGSYHVMLTSAGGGYSRWKNLAVTRWREDATCDNWGAFCYIGDVTNGDVWSTTHQPTLRRADTYEVAFAPGHAVFDRSDHAVRTQTEIAVAPEDDVELRRVRVTNGSSIRTVLEITSYAEIVLAPPAADAAHPAFSKLFVESEILRERQAILCTRRPRAPDEPTPWMFHLLTAPEPARGEVSYETDRMRFIGRGRSTADPQALDDDMALSGSAGAVLDAVVAIRCRIALYPGQAASVDLITGIGPTREKCLGLVAKYQHRQMADRVLAAAPAQGQAVLSRLHASETDARLYARLAGSVIYANASLRAPPSILGQNREGQSALWGYAISGDLPIVLLRISDPANIDLARQLAQAHAYWRLHGLAVDLVILCEGEASDQPALHEQITKLIAAGGDAGRIDQPGGFFVRPADKMPEGDCVLLRTVARVVISDADGPLAQQLERRCATPISSPPSATARRGARATRAPTKLPDEPAERDLLFYNGMGGFTPDGREYVITTRPGQMTPAPWVNVLANPSFGTLVSESGSATTWSENAHEFRRTPWSNDPVGDANTEAYYIRDEASGHYWSPTLLPRGGAAPYVTRHGFGYSVFEHDENSIDSELVVYVAKDEPVKFAVLTLRNRSGRARWLSVTGYLEWVLGDEATKTRLHVSTEADVGSGALFARNPYNTQFAGRAAFFVADDVAGWSFCGDRAEFLGRNGTLRDPAAMSQVQLSGTVGAALDPCAAIRIPFELADGQTREIAFRLGAGASIEEARRLVQRWQGSSAAHEALAAVKKHWQHTLGAVQVETPNRSLDILTNGWLVYQILACRMWARTAFYQSSGAFGFRDQLQDAMALVHATPELVREHLLHCASRQFPEGDVQHWWHPPSGSGVRTRCSDDYLWLPLATCRYVGATGDALVLDEPVHFLDGRALKDEEESAYDLPRRSDQVASLYDHCVRAVEHGLRCGTHGLPLMGSGDWNEGMNLVGAGGKGESVWLGFFLYAVLAQFGELARGRGDAPFAERCGGESIRLRDAIEQHAWDGAWYRRAWFDDGSPLGTAESAECRIDSIAQSWAVLSGAGNAQRAREAMNAVDTQLVRRDAALIRLLDPPFDHSEPSPGYIQGYVRGVRENGGQYTHAAVWAAMAFAALGDAKRAWELFSLLDPVNHTNSPDSIAVYKTEPYVLAGDVYALAPHTGRGGWAWYTGSAGWMYRFILESLLGLRLDADKLHVSPCLPADWNSFQVHYRYRQTIYHITVLQTSAANGEPRLTVDGVLLPGQAIPLVDDRREHLVEVRIPPAQG
>NZ_LR594691.1|WP_068678272.1|275442_276477_+|decarboxylating-6-phosphogluconate-dehydrogenase
MQIGMIGLGRMGANMTRRLMRAGHDCVVYAAHPASVERLTAQGATGSASLQQLVTMLSRPRAIWLMVPAAVVDQTIGDLLPLLDAGDIVVDGGNSYYRDDIRRGAELRASGIHYLDVGTSGGVAGLDRGYCLMIGGEDAVVQHLAPVFATLAPGVGAAAPTPGRSRNGSSAEQGYLHCGPHGAGHFVKMVHNGIEYGVMAAYAEGLSILRNANVGKRAGAVDAETTPLRNPELYQYEMDLPEIAEVWRRGSVIGSWLLDLTATALAADPVLAGFHGRVSDSGEGRWTIQAAIDEAVPAPVLSAALYARFSSRGESDFANRVLSAMRRQFGGHVEKAAGEPKAEA
>NZ_LR594691.1|WP_068678273.1|276559_277966_+|glucose-6-phosphate-dehydrogenase
MHDDPARAIAPSDALVLFGVTGDLAYKKIFPALYATCKRCALKVPVIGVASSAWSIEQLRARAKESVESTAVADDPIALDRLLSVLHYVGGDYNDAGTFEALKQALGGARRPAHYLAIPPALFPTVIRGLGTAGLAAQARVIVEKPFGRDLASARELNRVALEVFADNAIFRIDHFLGKEAVMNILYFRFANSFLEPIWNRNCVASVQITLAEEFGVQGRGAFYESAGCLRDVVQNHLFQIVALLAMEPPARRGFAAVHAGKANVFQAMRPLHPADIVRGQYTGYRKEPRVAKDSDVETYAALRLHIDSWRWEGVPWYLRSGKCLPETACEVLVRLKPPPQRLFADSVATSADANYLRFHLSPRSTIALAARVKRAGKGFVGDQQELCLVEEEASEEAPYERLLGDAMAGDNALFAREDAVEAAWTVVEPVLAEHPRATSYPPGSWGPPEADRLIAADGGWRNPEAAR
>NZ_LR594691.1|WP_068678274.1|277970_279794_+|glycoside-hydrolase-family-15-protein
MPLPIEDYALIGDCHTAALVGRDGSIDWLCIPRFDSGACFPALLGGPDHGRWLIAPCQGVRTVRRRYRDGTLILETEFETDEGAVRVIDSMPLSNERWDIVRIVEGLSGRVRMRTELVIRFDYGSIVPWVHKAHGTVLATAGPDTLELHTPVRTHGEQMKTVARFEVGAGERVPFVLNYRPSHEPMQPAIDPEQTLLETQREWLEWSQRGSYQGRWRSEVLRSLITLKALTYTPTGGIVAAPTTSLPEQAGGVRNWDYRYCWLRDATFTLNALLLAGYTGEAVAWREWLLRAVAGSPADLQMLYSVTGERRLDEVELGWLPGYGGAAPVRVGNAAARQFQLDVYGEVMDTLHLARAAGLATEPHVWRIQRALLDFLDTHWREPDEGIWEIRGPRRHFTHSKVMAWVAFDRAVKAVEHFGLDGPIDAWRRTRDAIHAQVCDAGFDARRNSFVQYYGASALDASLLLIPLVGFLPPDDARVRATVDAIQRELMAGGLVLRYATATGVDNLPPGEGAFLPCSFWLADSLALTGRRDEAEALFERLLTLRNDVGLLSEEFDPHTGRMLGNFPQALTHMALVNTARLLSLPQHRIKHSCMRGERPAAVAQTS
>NZ_LR594691.1|WP_068678294.1|280006_280726_+|HAD-family-hydrolase
MSAPCDLVFLFDVDNTLLDNDRVVSDLRHHLEQAFGSASADRYWTIFEQLRSELGYADYLGALQRYRVRELSDAMNDPRLLQMSTFLIDYPFADRLFTGALRAIEHLRRFGPTVILSDGDVVFQPRKVQRSGLWQAVDGRVLIYIHKELMLDAVQRHYPARHYVMVDDKLRILAAMKQTLGQRLTTVFPRQGHYAFDPHSIASYPPADITLDRIGDLADVDVPALLGQRPAGVSLQENS
>NZ_LR594691.1|WP_068678275.1|280722_281814_+|transaldolase
MNATRQLHDLGQSLWLDTITRGLLTSGTLARYIADFAVTGLTSNPTIFEQAIGKSDFYDEAIRRKAGEGESGEGLFFELALEDLTRAADLFRPVHDATGGVDGWVSLELSPLLAYDTAGSIQAASRLHARAGRPNLFIKIPGTPQGIPAIEESIFAGVPINVTLLFSRAQYAAAAEAYMRGIEHRIAAGRDPKIGSVASLFVSRWDAAVNDTIPAHLRSRLGIAVAMQTYRAYRELLASPRWQKLAAAGAQAQRLLWGSTGTKDPAARDTLYLEALAAPDTINTIPEKTLLAFADHGEVKQSLPADGGDAVAVLAECRRAGIDDAALAARLQREGADAFSKSWHQLLQRIAAKTDALTQASAP

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_LR594691_1	1.1\|2434\|46\|NZ_LR594691\|CRISPRCasFinder	2434-2479	46	NZ_LR594691	Variovorax sp. WDL1 plasmid 3	2434-2479	0	1.0
NZ_LR594691_2	2.1\|6109\|52\|NZ_LR594691\|CRISPRCasFinder	6109-6160	52	NZ_LR594691	Variovorax sp. WDL1 plasmid 3	6109-6160	0	1.0
NZ_LR594691_3	3.1\|6273\|41\|NZ_LR594691\|CRISPRCasFinder	6273-6313	41	NZ_LR594691	Variovorax sp. WDL1 plasmid 3	6273-6313	0	1.0
NZ_LR594691_3	3.2\|6338\|41\|NZ_LR594691\|CRISPRCasFinder	6338-6378	41	NZ_LR594691	Variovorax sp. WDL1 plasmid 3	6338-6378	0	1.0
NZ_LR594691_4	4.1\|8308\|55\|NZ_LR594691\|CRISPRCasFinder	8308-8362	55	NZ_LR594691	Variovorax sp. WDL1 plasmid 3	8308-8362	0	1.0
NZ_LR594691_4	4.2\|8390\|48\|NZ_LR594691\|CRISPRCasFinder	8390-8437	48	NZ_LR594691	Variovorax sp. WDL1 plasmid 3	8390-8437	0	1.0
NZ_LR594691_4	4.3\|8465\|45\|NZ_LR594691\|CRISPRCasFinder	8465-8509	45	NZ_LR594691	Variovorax sp. WDL1 plasmid 3	8465-8509	0	1.0
NZ_LR594691_4	4.4\|8537\|26\|NZ_LR594691\|CRISPRCasFinder	8537-8562	26	NZ_LR594691	Variovorax sp. WDL1 plasmid 3	8537-8562	0	1.0
NZ_LR594691_4	4.5\|8590\|42\|NZ_LR594691\|CRISPRCasFinder	8590-8631	42	NZ_LR594691	Variovorax sp. WDL1 plasmid 3	8590-8631	0	1.0
NZ_LR594691_5	5.1\|266094\|32\|NZ_LR594691\|CRISPRCasFinder	266094-266125	32	NZ_LR594691	Variovorax sp. WDL1 plasmid 3	266094-266125	0	1.0
NZ_LR594691_5	5.1\|266094\|32\|NZ_LR594691\|CRISPRCasFinder	266094-266125	32	NZ_LR594664	Variovorax sp. RA8 plasmid 3	152148-152179	1	0.969
NZ_LR594691_5	5.1\|266094\|32\|NZ_LR594691\|CRISPRCasFinder	266094-266125	32	NZ_CP013925	Acinetobacter baumannii strain KBN10P02143 plasmid pKBN10P02143, complete sequence	37685-37716	8	0.75
NZ_LR594691_5	5.1\|266094\|32\|NZ_LR594691\|CRISPRCasFinder	266094-266125	32	MN586049	Gordonia phage Yarn, complete genome	44062-44093	9	0.719
NZ_LR594691_5	5.1\|266094\|32\|NZ_LR594691\|CRISPRCasFinder	266094-266125	32	MN586036	Gordonia phage AndPeggy, complete genome	44051-44082	9	0.719
NZ_LR594691_5	5.1\|266094\|32\|NZ_LR594691\|CRISPRCasFinder	266094-266125	32	MN234215	Gordonia phage SteamedHams, complete genome	44020-44051	9	0.719

1. spacer 1.1|2434|46|NZ_LR594691|CRISPRCasFinder matches to NZ_LR594691 (Variovorax sp. WDL1 plasmid 3) position: , mismatch: 0, identity: 1.0

gttccgacttcgccgagctatcggtcaccggaaatgtaggggcgca	CRISPR spacer
gttccgacttcgccgagctatcggtcaccggaaatgtaggggcgca	Protospacer
**********************************************

2. spacer 2.1|6109|52|NZ_LR594691|CRISPRCasFinder matches to NZ_LR594691 (Variovorax sp. WDL1 plasmid 3) position: , mismatch: 0, identity: 1.0

cacagttgtctggaaaattcggcccaaaaatgcccaaattcagggccgcgcc	CRISPR spacer
cacagttgtctggaaaattcggcccaaaaatgcccaaattcagggccgcgcc	Protospacer
****************************************************

3. spacer 3.1|6273|41|NZ_LR594691|CRISPRCasFinder matches to NZ_LR594691 (Variovorax sp. WDL1 plasmid 3) position: , mismatch: 0, identity: 1.0

cacagttgctcgcgcgggtggctcggcgtggtcatcgcatc	CRISPR spacer
cacagttgctcgcgcgggtggctcggcgtggtcatcgcatc	Protospacer
*****************************************

4. spacer 3.2|6338|41|NZ_LR594691|CRISPRCasFinder matches to NZ_LR594691 (Variovorax sp. WDL1 plasmid 3) position: , mismatch: 0, identity: 1.0

agcaattagctgccaaccacccaagtaccactctggacggt	CRISPR spacer
agcaattagctgccaaccacccaagtaccactctggacggt	Protospacer
*****************************************

5. spacer 4.1|8308|55|NZ_LR594691|CRISPRCasFinder matches to NZ_LR594691 (Variovorax sp. WDL1 plasmid 3) position: , mismatch: 0, identity: 1.0

ctggccgatgacgcggggcgatcaacgtcgcgccgcgctccgggcaagccgccta	CRISPR spacer
ctggccgatgacgcggggcgatcaacgtcgcgccgcgctccgggcaagccgccta	Protospacer
*******************************************************

6. spacer 4.2|8390|48|NZ_LR594691|CRISPRCasFinder matches to NZ_LR594691 (Variovorax sp. WDL1 plasmid 3) position: , mismatch: 0, identity: 1.0

ttggcctggtaggcgaggacagcgccgacgtatgccgtgggtattcgt	CRISPR spacer
ttggcctggtaggcgaggacagcgccgacgtatgccgtgggtattcgt	Protospacer
************************************************

7. spacer 4.3|8465|45|NZ_LR594691|CRISPRCasFinder matches to NZ_LR594691 (Variovorax sp. WDL1 plasmid 3) position: , mismatch: 0, identity: 1.0

ctgcttggccgtgagaggagatcgaggctgcgcgctcgcatctat	CRISPR spacer
ctgcttggccgtgagaggagatcgaggctgcgcgctcgcatctat	Protospacer
*********************************************

8. spacer 4.4|8537|26|NZ_LR594691|CRISPRCasFinder matches to NZ_LR594691 (Variovorax sp. WDL1 plasmid 3) position: , mismatch: 0, identity: 1.0

ctgagcggccgctagcttcattacct	CRISPR spacer
ctgagcggccgctagcttcattacct	Protospacer
**************************

9. spacer 4.5|8590|42|NZ_LR594691|CRISPRCasFinder matches to NZ_LR594691 (Variovorax sp. WDL1 plasmid 3) position: , mismatch: 0, identity: 1.0

tttcggcgcggcgcttggccgacctttgctgcaatcaacgtc	CRISPR spacer
tttcggcgcggcgcttggccgacctttgctgcaatcaacgtc	Protospacer
******************************************

10. spacer 5.1|266094|32|NZ_LR594691|CRISPRCasFinder matches to NZ_LR594691 (Variovorax sp. WDL1 plasmid 3) position: , mismatch: 0, identity: 1.0

aacccgcaatgaacatggacatgggaaaaccg	CRISPR spacer
aacccgcaatgaacatggacatgggaaaaccg	Protospacer
********************************

11. spacer 5.1|266094|32|NZ_LR594691|CRISPRCasFinder matches to NZ_LR594664 (Variovorax sp. RA8 plasmid 3) position: , mismatch: 1, identity: 0.969

aacccgcaatgaacatggacatgggaaaaccg	CRISPR spacer
aaccggcaatgaacatggacatgggaaaaccg	Protospacer
**** ***************************

12. spacer 5.1|266094|32|NZ_LR594691|CRISPRCasFinder matches to NZ_CP013925 (Acinetobacter baumannii strain KBN10P02143 plasmid pKBN10P02143, complete sequence) position: , mismatch: 8, identity: 0.75

aacccgcaatgaacatggacatgggaaaaccg	CRISPR spacer
ctcacacaatgtacatggacgtgggaaaacaa	Protospacer
  * *.***** ********.********* .

13. spacer 5.1|266094|32|NZ_LR594691|CRISPRCasFinder matches to MN586049 (Gordonia phage Yarn, complete genome) position: , mismatch: 9, identity: 0.719

aacccgcaatgaacatggacatgggaaaaccg	CRISPR spacer
tacccacaatgaacagggacatggcaggtaag	Protospacer
 ****.********* ******** *..   *

14. spacer 5.1|266094|32|NZ_LR594691|CRISPRCasFinder matches to MN586036 (Gordonia phage AndPeggy, complete genome) position: , mismatch: 9, identity: 0.719

aacccgcaatgaacatggacatgggaaaaccg	CRISPR spacer
tacccacaatgaacagggacatggcaggtaag	Protospacer
 ****.********* ******** *..   *

15. spacer 5.1|266094|32|NZ_LR594691|CRISPRCasFinder matches to MN234215 (Gordonia phage SteamedHams, complete genome) position: , mismatch: 9, identity: 0.719

aacccgcaatgaacatggacatgggaaaaccg	CRISPR spacer
tacccacaatgaacagggacatggcaggtaag	Protospacer
 ****.********* ******** *..   *

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

302295 : 335076

Burkholderia_virus(22.22%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_102906035.1\|302295_303553_+\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	3.4e-120	74.5
WP_068684987.1\|303876_304509_+	LemA family protein	NA	NA	NA	NA
WP_174262855.1\|304592_305369_+	TPM domain-containing protein	NA	NA	NA	NA
WP_068684991.1\|305371_305869_+	TPM domain-containing protein	NA	NA	NA	NA
WP_083944805.1\|307645_307987_+	MFS transporter	NA	NA	NA	NA
WP_068684997.1\|308019_308424_-	hypothetical protein	NA	NA	NA	NA
WP_102906053.1\|309904_310888_+\|transposase	IS5 family transposase	E5E3P6	Burkholderia_phage	4.1e-113	67.4
WP_174262853.1\|311167_311890_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA
WP_068681721.1\|312243_313020_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA
WP_068681719.1\|313030_314068_+	zinc-dependent alcohol dehydrogenase family protein	E3SJ82	Synechococcus_phage	1.6e-14	25.6
WP_068681717.1\|314076_315600_+	DASS family sodium-coupled anion symporter	NA	NA	NA	NA
WP_102906041.1\|316586_316979_-	hypothetical protein	NA	NA	NA	NA
WP_068673442.1\|317141_317585_+\|transposase	transposase	NA	NA	NA	NA
WP_068673444.1\|317560_317914_+	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	5.1e-18	41.8
WP_102905039.1\|318008_319574_+\|transposase	IS66 family transposase	S5VTD3	Leptospira_phage	1.0e-70	37.6
WP_068673446.1\|319604_320318_-	UPF0149 family protein	NA	NA	NA	NA
WP_068681290.1\|321299_321854_+	plasmid pRiA4b ORF-3 family protein	A0A2H4PDG5	Mycobacterium_phage	1.2e-21	32.4
WP_102906039.1\|321867_322116_+	hypothetical protein	NA	NA	NA	NA
WP_068681266.1\|322271_322463_+	hypothetical protein	NA	NA	NA	NA
WP_068681270.1\|323060_323381_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_146039650.1\|323490_323790_-	hypothetical protein	NA	NA	NA	NA
WP_068681275.1\|324209_324419_+	hypothetical protein	NA	NA	NA	NA
WP_068681277.1\|324736_325057_+	hypothetical protein	NA	NA	NA	NA
WP_068681279.1\|325079_325295_+	hypothetical protein	NA	NA	NA	NA
WP_146039651.1\|325357_325729_+	hypothetical protein	NA	NA	NA	NA
WP_157103456.1\|325738_325882_+	hypothetical protein	NA	NA	NA	NA
WP_157103457.1\|325904_326072_-	hypothetical protein	NA	NA	NA	NA
WP_068681282.1\|326275_326692_-	antitoxin	F1C593	Cronobacter_phage	6.7e-33	55.6
WP_068681284.1\|326701_326878_-	type II toxin-antitoxin system HicA family toxin	A0A0R6PGU2	Moraxella_phage	7.7e-07	53.7
WP_102906035.1\|328325_329584_-\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	3.4e-120	74.5
WP_068684135.1\|329796_330591_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_068684133.1\|330807_331056_-	hypothetical protein	NA	NA	NA	NA
WP_157103496.1\|331052_331223_-	hypothetical protein	NA	NA	NA	NA
WP_157103495.1\|331219_331357_-	hypothetical protein	NA	NA	NA	NA
WP_068684131.1\|331824_332349_-	H-NS histone family protein	NA	NA	NA	NA
WP_068684129.1\|333468_335076_+\|transposase	IS21 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

5. NZ_LR594692

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

4163 : 55955

Stx2-converting_phage(22.22%)

integrase,transposase

attL 15900:15959|attR 39784:39978

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_068679061.1\|4163_6095_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_068679037.1\|6194_6476_+	type II toxin-antitoxin system HigB family toxin	A0A0P0ZE17	Stx2-converting_phage	3.2e-07	31.2
WP_068679039.1\|6463_6913_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_146039715.1\|6914_7157_-	hypothetical protein	NA	NA	NA	NA
WP_068679043.1\|7433_10190_+	DEAD/DEAH box helicase	A0A160DHD3	Gordonia_phage	2.1e-42	28.0
WP_068679045.1\|10225_11257_+	hypothetical protein	NA	NA	NA	NA
WP_083944471.1\|11910_12162_+	hypothetical protein	NA	NA	NA	NA
WP_068673442.1\|12243_12687_+\|transposase	transposase	NA	NA	NA	NA
WP_068673444.1\|12662_13016_+	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	5.1e-18	41.8
WP_102905039.1\|13110_14676_+\|transposase	IS66 family transposase	S5VTD3	Leptospira_phage	1.0e-70	37.6
WP_068673446.1\|14706_15420_-	UPF0149 family protein	NA	NA	NA	NA
WP_162487255.1\|15575_15989_+	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	1.0e-17	42.4
15900:15959	attL	NA	NA	NA	NA
WP_102906951.1\|16098_16890_-	ATP-binding protein	A0A059NT77	Lactococcus_phage	2.1e-27	32.1
WP_102906952.1\|18693_20069_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	1.1e-71	51.5
WP_102906369.1\|20130_20517_+\|transposase	transposase	A0A0P0ZBP6	Stx2-converting_phage	1.0e-06	35.4
WP_012745822.1\|20513_20861_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.4e-36	66.4
WP_102906375.1\|20966_22529_+\|transposase	IS66 family transposase	A0A0P0ZBS5	Stx2-converting_phage	5.3e-131	49.3
WP_068684759.1\|22568_23084_+	hypothetical protein	NA	NA	NA	NA
WP_068683438.1\|24370_25171_+	ATP-binding protein	U5N3V8	Enterobacteria_phage	3.0e-66	54.0
WP_068681360.1\|26530_26917_+	hypothetical protein	NA	NA	NA	NA
WP_068681358.1\|27089_27287_-	CsbD family protein	NA	NA	NA	NA
WP_102906367.1\|27509_29075_+	DUF2075 domain-containing protein	NA	NA	NA	NA
WP_102906365.1\|29071_29980_+	HAMP domain-containing histidine kinase	NA	NA	NA	NA
WP_102905990.1\|30029_30977_+\|transposase	IS481 family transposase	Q9ZXG3	Shigella_phage	1.9e-06	33.7
WP_162487256.1\|31027_31363_+	ATP-binding protein	A0A2K9L0Z8	Tupanvirus	5.4e-09	39.6
WP_068686162.1\|32991_33384_+\|transposase	transposase	NA	NA	NA	NA
WP_068686164.1\|33396_33738_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_146039717.1\|35571_36498_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	1.6e-42	37.3
WP_068681936.1\|36455_36764_-\|transposase	transposase	NA	NA	NA	NA
WP_162487257.1\|37194_37986_+	ATP-binding protein	A0A059NT77	Lactococcus_phage	1.2e-27	31.6
WP_146039729.1\|38175_38568_+\|transposase	transposase	NA	NA	NA	NA
WP_146039718.1\|38567_39617_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	A0A1B3AZE5	Gordonia_phage	2.3e-05	28.9
WP_068681512.1\|40018_41746_-	long-chain fatty acid--CoA ligase	A0A2H4PQU7	Staphylococcus_phage	1.2e-32	30.4
39784:39978	attR	NA	NA	NA	NA
WP_068681510.1\|41818_42775_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_068680679.1\|42980_43784_-	ATP-binding protein	U5N3V8	Enterobacteria_phage	2.2e-32	34.6
WP_068680682.1\|43780_45274_-\|transposase	IS21 family transposase	NA	NA	NA	NA
WP_102906359.1\|45341_46349_-	TauD/TfdA family dioxygenase	NA	NA	NA	NA
WP_068677998.1\|46422_47418_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_162487258.1\|47449_48499_-	TauD/TfdA family dioxygenase	NA	NA	NA	NA
WP_068678000.1\|48495_49164_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_083944492.1\|50350_51733_+	MmgE/PrpD family protein	NA	NA	NA	NA
WP_068679627.1\|51767_53102_+	MmgE/PrpD family protein	NA	NA	NA	NA
WP_174262858.1\|53196_53838_-	3-oxoacid CoA-transferase subunit B	NA	NA	NA	NA
WP_068680684.1\|54743_55955_+\|transposase	IS110 family transposase	NA	NA	NA	NA

DBSCAN-SWA_2

81689 : 197472

110

Staphylococcus_phage(11.11%)

integrase,transposase

attL 139092:139151|attR 199216:199231

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_162487271.1\|81689_82950_-\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	8.3e-119	74.0
WP_162487262.1\|84191_84446_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_102906952.1\|84975_86351_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	1.1e-71	51.5
WP_068685870.1\|87607_88447_-	p-hydroxycinnamoyl CoA hydratase/lyase	NA	NA	NA	NA
WP_068685863.1\|88682_89642_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_102906347.1\|89665_91231_-	AMP-binding protein	A0A2H4PQM9	Staphylococcus_phage	2.4e-30	30.0
WP_146039722.1\|91218_91734_-	hypothetical protein	NA	NA	NA	NA
WP_068685859.1\|91780_92215_-	hypothetical protein	NA	NA	NA	NA
WP_162487263.1\|93767_94646_+	hypothetical protein	NA	NA	NA	NA
WP_162487264.1\|94836_95874_+	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA
WP_102906955.1\|97194_98793_-\|transposase	IS66 family transposase	A0A218MNE7	uncultured_virus	5.8e-93	40.2
WP_068683947.1\|98868_99207_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_068683949.1\|99203_99590_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_068683952.1\|100785_102309_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	5.4e-48	35.7
WP_083944483.1\|104242_104644_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_068679411.1\|104776_105742_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_068682083.1\|107599_109108_+	group II intron reverse transcriptase/maturase	NA	NA	NA	NA
WP_068682085.1\|109317_109653_+	CoA transferase	NA	NA	NA	NA
WP_146039724.1\|111177_111423_-	hypothetical protein	NA	NA	NA	NA
WP_068682089.1\|112093_112615_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_068682091.1\|113735_114263_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
WP_068682093.1\|114613_116002_-	AMP-binding protein	NA	NA	NA	NA
WP_068682095.1\|116012_116453_-	hypothetical protein	NA	NA	NA	NA
WP_068682097.1\|116449_116899_-	MaoC family dehydratase N-terminal domain-containing protein	NA	NA	NA	NA
WP_068682099.1\|116895_118032_-	thiolase family protein	NA	NA	NA	NA
WP_068682101.1\|118196_119318_+	phenylacetate-CoA oxygenase subunit PaaI	NA	NA	NA	NA
WP_068682103.1\|119330_120011_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_068682105.1\|120090_120477_+	OB-fold domain-containing protein	NA	NA	NA	NA
WP_083944607.1\|120473_121325_+	thiolase domain-containing protein	NA	NA	NA	NA
WP_146039725.1\|121366_121891_-	FAD-binding protein	NA	NA	NA	NA
WP_068682107.1\|121944_122244_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
WP_162487265.1\|122364_123123_-	FadR family transcriptional regulator	NA	NA	NA	NA
WP_162487266.1\|124053_124872_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
WP_083944609.1\|124895_125801_-	IclR family transcriptional regulator	NA	NA	NA	NA
WP_068682113.1\|125979_126969_+	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA
WP_068682114.1\|126984_128229_+	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA
WP_068682137.1\|128239_128707_+	terephthalate 1,2-dioxygenase	NA	NA	NA	NA
WP_068682115.1\|128713_129655_+	4-hydroxythreonine-4-phosphate dehydrogenase PdxA	NA	NA	NA	NA
WP_068682117.1\|129651_130482_+	alpha/beta fold hydrolase	R9RXH6	Mycobacterium_phage	7.1e-10	26.2
WP_068682119.1\|130478_131393_+	VOC family protein	NA	NA	NA	NA
WP_162487267.1\|131411_132230_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_068682123.1\|132380_133673_+	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA
WP_083944614.1\|133702_134203_+	hypothetical protein	NA	NA	NA	NA
WP_068682127.1\|134217_135804_+	AMP-binding protein	A0A2H4PQU7	Staphylococcus_phage	4.8e-31	26.4
WP_068682129.1\|135800_136982_+	thiolase family protein	NA	NA	NA	NA
WP_162487268.1\|136989_137397_+	OB-fold domain-containing protein	NA	NA	NA	NA
WP_068682133.1\|137422_138394_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA
139092:139151	attL	NA	NA	NA	NA
WP_102906335.1\|139223_140356_-\|transposase	IS3 family transposase	NA	NA	NA	NA
139092:139151	attL	NA	NA	NA	NA
WP_068685913.1\|140468_140771_+	hypothetical protein	NA	NA	NA	NA
WP_068685909.1\|141167_142289_-	DNA-binding protein	NA	NA	NA	NA
WP_102906331.1\|142399_143563_+\|integrase	site-specific integrase	NA	NA	NA	NA
WP_068685911.1\|143874_144534_-	CoA transferase	NA	NA	NA	NA
WP_102906325.1\|144577_145297_-\|transposase	IS6 family transposase	A0A077SL39	Escherichia_phage	5.0e-44	47.4
WP_068684376.1\|145401_145689_+	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA
WP_068684378.1\|145676_146000_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_102906327.1\|146375_146534_-\|transposase	transposase	NA	NA	NA	NA
WP_102906325.1\|146602_147322_+\|transposase	IS6 family transposase	A0A077SL39	Escherichia_phage	5.0e-44	47.4
146244:146541	attR	NA	NA	NA	NA
WP_162487269.1\|147344_147476_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
146244:146541	attR	NA	NA	NA	NA
WP_068673366.1\|147833_148250_-	type II toxin-antitoxin system HicB family antitoxin	A0A0R6PD76	Moraxella_phage	2.5e-32	59.0
WP_068673364.1\|148259_148436_-	type II toxin-antitoxin system HicA family toxin	A0A0R6PGU2	Moraxella_phage	5.3e-08	55.6
WP_157103359.1\|148936_149098_-	hypothetical protein	NA	NA	NA	NA
WP_068678855.1\|149121_150357_-\|transposase	ISL3 family transposase	NA	NA	NA	NA
WP_068683861.1\|151010_151268_+	hypothetical protein	NA	NA	NA	NA
WP_146039727.1\|152213_152564_-	hypothetical protein	NA	NA	NA	NA
WP_068683853.1\|152586_153225_-	YkgJ family cysteine cluster protein	NA	NA	NA	NA
WP_068683851.1\|154149_155175_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_068683847.1\|155300_155834_+	H-NS histone family protein	NA	NA	NA	NA
WP_068683845.1\|156133_156427_-	hypothetical protein	NA	NA	NA	NA
WP_146039728.1\|156410_156758_-	hypothetical protein	NA	NA	NA	NA
WP_068683841.1\|156754_157663_-	ParB/RepB/Spo0J family partition protein	NA	NA	NA	NA
WP_068683839.1\|157659_158454_-	ParA family protein	A0A0K2FLP4	Brevibacillus_phage	4.4e-09	25.2
WP_068683837.1\|158754_159336_+	hypothetical protein	NA	NA	NA	NA
WP_102906319.1\|159407_159707_+	hypothetical protein	NA	NA	NA	NA
WP_102906317.1\|159742_160024_+	TrbC/VirB2 family protein	NA	NA	NA	NA
WP_068683835.1\|160035_160404_+	type IV secretion system protein VirB3	NA	NA	NA	NA
WP_068683831.1\|160417_162925_+	VirB4 family type IV secretion/conjugal transfer ATPase	NA	NA	NA	NA
WP_068683830.1\|162917_163652_+	type IV secretion system protein	NA	NA	NA	NA
WP_068683829.1\|163930_164983_+	type IV secretion system protein	NA	NA	NA	NA
WP_068683828.1\|165136_165859_+	hypothetical protein	NA	NA	NA	NA
WP_068683827.1\|165855_166698_+	P-type conjugative transfer protein VirB9	NA	NA	NA	NA
WP_068683826.1\|166694_168035_+	type IV secretion system protein VirB10	NA	NA	NA	NA
WP_083944716.1\|168003_169152_+	P-type DNA transfer ATPase VirB11	NA	NA	NA	NA
WP_068683824.1\|169117_171079_+	type IV secretory system conjugative DNA transfer family protein	NA	NA	NA	NA
WP_068683822.1\|171145_172360_+	hypothetical protein	NA	NA	NA	NA
WP_068683820.1\|172346_172934_+	phospholipase D family protein	A0A1B2LRT6	Wolbachia_phage	9.5e-17	34.1
WP_083944714.1\|172937_173675_+	conjugal transfer protein TraX	A0A1D6ZIU7	Xanthomonas_phage	3.1e-25	41.6
WP_068683816.1\|173785_174265_+	hypothetical protein	NA	NA	NA	NA
WP_083944713.1\|174261_175449_+	zeta toxin family protein	NA	NA	NA	NA
WP_068680679.1\|175622_176426_-	ATP-binding protein	U5N3V8	Enterobacteria_phage	2.2e-32	34.6
WP_068680682.1\|176422_177916_-\|transposase	IS21 family transposase	NA	NA	NA	NA
WP_068679047.1\|178213_178996_-	hypothetical protein	NA	NA	NA	NA
WP_146039712.1\|179001_179829_-	hypothetical protein	NA	NA	NA	NA
WP_068678991.1\|179806_180061_-	hypothetical protein	NA	NA	NA	NA
WP_162487270.1\|180325_180643_+	GIY-YIG nuclease family protein	NA	NA	NA	NA
WP_083944468.1\|180720_180978_+	hypothetical protein	NA	NA	NA	NA
WP_068678993.1\|180983_181208_+	hypothetical protein	NA	NA	NA	NA
WP_146039713.1\|181236_182379_-	SH3 domain-containing protein	NA	NA	NA	NA
WP_068678997.1\|183027_183402_+	hypothetical protein	A0A126HDH8	Lactococcus_phage	1.9e-10	35.1
WP_068678999.1\|183417_183996_-	hypothetical protein	NA	NA	NA	NA
WP_068679001.1\|184556_185030_-	hypothetical protein	NA	NA	NA	NA
WP_068679003.1\|186712_187585_-\|integrase	site-specific integrase	S5W9T9	Leptospira_phage	1.1e-29	30.5
WP_068679005.1\|187861_188953_-	relaxase/mobilization nuclease domain-containing protein	NA	NA	NA	NA
WP_174262859.1\|188960_189257_-	hypothetical protein	NA	NA	NA	NA
WP_068679007.1\|189803_190061_-	hypothetical protein	NA	NA	NA	NA
WP_068679009.1\|190057_190309_-	hypothetical protein	NA	NA	NA	NA
WP_068679011.1\|190402_192037_-	hypothetical protein	G8DH78	Emiliania_huxleyi_virus	1.6e-13	32.0
WP_068679013.1\|192145_192637_-	hypothetical protein	NA	NA	NA	NA
WP_068679051.1\|192626_194501_-\|integrase	integrase	NA	NA	NA	NA
WP_102906313.1\|194503_196312_-	hypothetical protein	NA	NA	NA	NA
WP_068679015.1\|196308_197472_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
199216:199231	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage