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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_LR594035 Streptococcus porcinus strain NCTC5385 chromosome 1 1 crisprs DEDDh,cas3,DinG,csm6,csn2,cas2,RT 1 0 9 0

Results visualization

1. NZ_LR594035
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LR594035_1 1503996-1504066 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_LR594035_1 1.1|1504019|25|NZ_LR594035|CRISPRCasFinder 1504019-1504043 25 NZ_LR594035.1 1503924-1503948 2 0.92

1. spacer 1.1|1504019|25|NZ_LR594035|CRISPRCasFinder matches to position: 1503924-1503948, mismatch: 2, identity: 0.92

cgaattacgcactgaatctgataga	CRISPR spacer
cgaattacgcactgagtcggataga	Protospacer
***************.** ******

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 232937 : 275598 67 Streptococcus_phage(83.67%) portal,terminase,tail,tRNA,holin,integrase,capsid attL 239228:239248|attR 276959:276979
DBSCAN-SWA_2 355673 : 425501 86 Streptococcus_phage(65.12%) portal,protease,terminase,tail,head,tRNA,holin,integrase,capsid attL 353472:353486|attR 393562:393576
DBSCAN-SWA_3 463012 : 612533 112 Paenibacillus_phage(23.91%) integrase,tRNA,transposase,bacteriocin attL 538821:538880|attR 618908:620130
DBSCAN-SWA_4 719818 : 797911 95 Streptococcus_phage(70.59%) portal,protease,terminase,tail,head,tRNA,holin,integrase,capsid attL 720085:720100|attR 730114:730129
DBSCAN-SWA_5 832931 : 842026 8 Streptococcus_phage(57.14%) NA NA
DBSCAN-SWA_6 1571994 : 1594686 21 Paenibacillus_phage(60.0%) bacteriocin,transposase NA
DBSCAN-SWA_7 1644208 : 1659103 17 Streptococcus_phage(83.33%) transposase NA
DBSCAN-SWA_8 1752289 : 1800786 44 Paenibacillus_phage(33.33%) transposase,protease,tRNA,holin,integrase attL 1744885:1744901|attR 1783427:1783443
DBSCAN-SWA_9 1816861 : 1891733 53 Paenibacillus_phage(21.43%) protease,tRNA,bacteriocin,transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage