CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_LR594034	Streptococcus dysgalactiae subsp. equisimilis strain NCTC8546 chromosome 1	3 crisprs	DEDDh,DinG,csm6,csn2,cas2,cas1,cas9,csa3,cas3	0	10	10	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_LR594034_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR594034_1

1219276-1219839

TypeII

II-A,II-B

Consensus_repeat	Method
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	CRISPRCasFinder
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	CRT
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	PILER-CR

8 spacers

csn2,cas2,cas1,cas9

The CRISPR arrays of NZ_LR594034_1

>merge|NZ_LR594034|1|1219276-1219839|CRISPRCasFinder,CRT,PILER-CR
GAATTGGGACCATTCAAAACAACATAGCTCTAAAACAGCGAATTAGTAAAAGTAATCTGTTTACTTGTTTTGGGACCATTCAAAACAACATAGCTCTAAAACTCCAGTAATTGTCACAGTATACTGATTTTGGTTTTGGGACCATTCAAAACAACATAGCTCTAAAACTCCAGTAATTGTCACAGTATACTGATTTTGGTTTTGGGACCATTCAAAACAACATAGCTCTAAAACGTCTTGACTAAATCTTTCGGCAGTTCGATTGTTTTGGGACCATTCAAAACAACATAGCTCTAAAACTTGACCTCTGCTGCTTTGAATCCTTTTTGGGTTTTGGGACCATTCAAAACAACATAGCTCTAAAACCCTAAGGCAATAACAAGAATTGTTAGCAAGGTTTTGGGACCATTCAAAACAACATAGCTCTAAAACAATTTGAGCGTGGGGCTTTTTTTATTTGTCGTTTTGGGACCATTCAAAACAACATAGCTCTAAAACTCCTCGTAAGCTCCACTCCATCTGCTAAAGGTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC

>NZ_LR594034|1|1|1219276-1219839|CRISPRCasFinder
GAATTGGGACCATTCAAAACAACATAGCTCTAAAAC	AGCGAATTAGTAAAAGTAATCTGTTTACTT
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	TCCAGTAATTGTCACAGTATACTGATTTTG
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	TCCAGTAATTGTCACAGTATACTGATTTTG
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	GTCTTGACTAAATCTTTCGGCAGTTCGATT
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	TTGACCTCTGCTGCTTTGAATCCTTTTTGG
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	CCTAAGGCAATAACAAGAATTGTTAGCAAG
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	AATTTGAGCGTGGGGCTTTTTTTATTTGTC
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	TCCTCGTAAGCTCCACTCCATCTGCTAAAG
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC

>NZ_LR594034|1|1|1219276-1219839|CRT
GAATTGGGACCATTCAAAACAACATAGCTCTAAAAC	AGCGAATTAGTAAAAGTAATCTGTTTACTT
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	TCCAGTAATTGTCACAGTATACTGATTTTG
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	TCCAGTAATTGTCACAGTATACTGATTTTG
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	GTCTTGACTAAATCTTTCGGCAGTTCGATT
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	TTGACCTCTGCTGCTTTGAATCCTTTTTGG
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	CCTAAGGCAATAACAAGAATTGTTAGCAAG
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	AATTTGAGCGTGGGGCTTTTTTTATTTGTC
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	TCCTCGTAAGCTCCACTCCATCTGCTAAAG
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC

>NZ_LR594034|1|1|1219342-1219839|PILER-CR
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	TCCAGTAATTGTCACAGTATACTGATTTTG
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	TCCAGTAATTGTCACAGTATACTGATTTTG
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	GTCTTGACTAAATCTTTCGGCAGTTCGATT
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	TTGACCTCTGCTGCTTTGAATCCTTTTTGG
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	CCTAAGGCAATAACAAGAATTGTTAGCAAG
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	AATTTGAGCGTGGGGCTTTTTTTATTTGTC
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	TCCTCGTAAGCTCCACTCCATCTGCTAAAG
GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR594034.1\|WP_065355170.1\|1212300_1213320_-\|YeiH-family-putative-sulfate-export-transporter	unknown	unknown	gnl\|CDD\|225411
NZ_LR594034.1\|WP_041789030.1\|1226392_1227022_-\|TIGR01906-family-membrane-protein	unknown	unknown	gnl\|CDD\|226884
NZ_LR594034.1\|WP_003060515.1\|1211668_1212094_-\|PTS-mannose-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|225446
NZ_LR594034.1\|WP_002984855.1\|1229739_1230381_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594034.1\|WP_003058431.1\|1215085_1215316_-\|bacteriocin	unknown	unknown	gnl\|CDD\|366773
NZ_LR594034.1\|WP_138083893.1\|1221800_1225916_-\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226044
NZ_LR594034.1\|WP_138098523.1\|1220931_1221801_-\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|274694
NZ_LR594034.1\|WP_015017092.1\|1216799_1218632_-\|elongation-factor-4	unknown	unknown	gnl\|CDD\|235462
NZ_LR594034.1\|WP_003058441.1\|1214789_1215086_-\|bacteriocin-immunity-protein	unknown	unknown	gnl\|CDD\|370205
NZ_LR594034.1\|WP_003058436.1\|1219941_1220604_-\|type-II-A-CRISPR-associated-protein-Csn2	csn2	cd09758_csn2_CAS-II-A	gnl\|CDD\|213408
NZ_LR594034.1\|WP_003056620.1\|1230504_1231860_-\|phosphoglucosamine-mutase	unknown	unknown	gnl\|CDD\|237670
NZ_LR594034.1\|WP_138098521.1\|1213430_1214600_-\|DUF2974-domain-containing-protein	unknown	unknown	gnl\|CDD\|371412
NZ_LR594034.1\|WP_046177080.1\|1227785_1228538_-\|acyl-[acyl-carrier-protein]-thioesterase	unknown	unknown	gnl\|CDD\|226401
NZ_LR594034.1\|WP_002989934.1\|1211158_1211650_-\|PTS-system-mannose/fructose/N-acetylgalactosamine-transporter-subunit-IIB	unknown	unknown	gnl\|CDD\|225976
NZ_LR594034.1\|WP_003060113.1\|1228547_1229678_-\|oxygen-independent-coproporphyrinogen-III-oxidase	unknown	unknown	gnl\|CDD\|236309
NZ_LR594034.1\|WP_003062486.1\|1216186_1216624_-\|peptide-methionine-(R)-S-oxide-reductase-MsrB	unknown	unknown	gnl\|CDD\|234692
NZ_LR594034.1\|WP_003059696.1\|1215523_1216174_-\|HD-domain-containing-protein	unknown	unknown	gnl\|CDD\|224336
NZ_LR594034.1\|WP_003058414.1\|1220593_1220935_-\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
NZ_LR594034.1\|WP_003060137.1\|1218701_1219160_-\|nucleoside-diphosphate-kinase	unknown	unknown	gnl\|CDD\|179085
NZ_LR594034.1\|WP_003054515.1\|1227021_1227786_-\|TIGR01457-family-HAD-type-hydrolase	unknown	unknown	gnl\|CDD\|319832

Protein	Function_ID	Function_description	E-value
NZ_LR594034.1\|WP_065355170.1\|1212300_1213320_-\|YeiH-family-putative-sulfate-export-transporter	gnl\|CDD\|225411	COG2855, COG2855, Predicted membrane protein [Function unknown].	3.84969e-103
NZ_LR594034.1\|WP_041789030.1\|1226392_1227022_-\|TIGR01906-family-membrane-protein	gnl\|CDD\|226884	COG4478, COG4478, Predicted membrane protein [Function unknown].	1.94922e-80
NZ_LR594034.1\|WP_003060515.1\|1211668_1212094_-\|PTS-mannose-transporter-subunit-IIA	gnl\|CDD\|225446	COG2893, ManX, Phosphotransferase system, mannose/fructose-specific component IIA [Carbohydrate transport and metabolism].	4.93402e-30
NZ_LR594034.1\|WP_003058431.1\|1215085_1215316_-\|bacteriocin	gnl\|CDD\|366773	pfam01721, Bacteriocin_II, Class II bacteriocin. The bacteriocins are small peptides that inhibit the growth of various bacteria. Bacteriocins of lactic acid bacteria may inhibit their target cells by permeabilising the cell membrane.	2.52035e-05
NZ_LR594034.1\|WP_138083893.1\|1221800_1225916_-\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|226044	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms].	0
NZ_LR594034.1\|WP_138098523.1\|1220931_1221801_-\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	5.51022e-130
NZ_LR594034.1\|WP_015017092.1\|1216799_1218632_-\|elongation-factor-4	gnl\|CDD\|235462	PRK05433, PRK05433, GTP-binding protein LepA; Provisional.	0
NZ_LR594034.1\|WP_003058441.1\|1214789_1215086_-\|bacteriocin-immunity-protein	gnl\|CDD\|370205	pfam08951, EntA_Immun, Enterocin A Immunity. Gram-positive lactobacilli produce bacteriocins to kill closely-related competitor species. To protect themselves from the bacteriocidal activity of this molecule they co-express an immunity protein (for discussion of this operon see Bacteriocin_IIc pfam10439). The immunity protein structure is a soluble, cytoplasmic, antiparallel four alpha-helical globular bundle with a fifth, more flexible and more divergent C-terminal helical hair-pin. The C-terminal hair-pin recognizes the C-terminus of the producer bacteriocin and this interaction is sufficient to dis-orient the bacteriocin within the membrane and close up the permeabilising pore that on its own the bacteriocin creates. These immunity proteins interact in the same way with other bacteriocins, family Bacteriocin_II, pfam01721. Since many enterococci can produce more than one bacteriocin it seems likely that the whole operon can be carried on transferable plasmids.	0.000236171
NZ_LR594034.1\|WP_003058436.1\|1219941_1220604_-\|type-II-A-CRISPR-associated-protein-Csn2	gnl\|CDD\|213408	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	1.79014e-124
NZ_LR594034.1\|WP_003056620.1\|1230504_1231860_-\|phosphoglucosamine-mutase	gnl\|CDD\|237670	PRK14316, glmM, phosphoglucosamine mutase; Provisional.	0
NZ_LR594034.1\|WP_138098521.1\|1213430_1214600_-\|DUF2974-domain-containing-protein	gnl\|CDD\|371412	pfam11187, DUF2974, Protein of unknown function (DUF2974). This bacterial family of proteins has no known function.	2.20838e-78
NZ_LR594034.1\|WP_046177080.1\|1227785_1228538_-\|acyl-[acyl-carrier-protein]-thioesterase	gnl\|CDD\|226401	COG3884, FatA, Acyl-ACP thioesterase [Lipid metabolism].	7.04528e-106
NZ_LR594034.1\|WP_002989934.1\|1211158_1211650_-\|PTS-system-mannose/fructose/N-acetylgalactosamine-transporter-subunit-IIB	gnl\|CDD\|225976	COG3444, COG3444, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB [Carbohydrate transport and metabolism].	8.80769e-55
NZ_LR594034.1\|WP_003060113.1\|1228547_1229678_-\|oxygen-independent-coproporphyrinogen-III-oxidase	gnl\|CDD\|236309	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase.	0
NZ_LR594034.1\|WP_003062486.1\|1216186_1216624_-\|peptide-methionine-(R)-S-oxide-reductase-MsrB	gnl\|CDD\|234692	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB.	2.05206e-85
NZ_LR594034.1\|WP_003059696.1\|1215523_1216174_-\|HD-domain-containing-protein	gnl\|CDD\|224336	COG1418, COG1418, Predicted HD superfamily hydrolase [General function prediction only].	4.37772e-34
NZ_LR594034.1\|WP_003058414.1\|1220593_1220935_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	2.78796e-56
NZ_LR594034.1\|WP_003060137.1\|1218701_1219160_-\|nucleoside-diphosphate-kinase	gnl\|CDD\|179085	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated.	5.05917e-75
NZ_LR594034.1\|WP_003054515.1\|1227021_1227786_-\|TIGR01457-family-HAD-type-hydrolase	gnl\|CDD\|319832	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase. Escherichia coli UmpH/NagD is a ribonucleoside tri-, di-, and monophosphatase with a preference for purines, it shows peak activity with UMP and functions in UMP-degradation. It is also an effective phosphatase with AMP, GMP and CMP. Mycobacterium tuberculosis phosphatase, Rv1692 is a glycerol 3-phosphate phosphatase. Rv1692 is the final enzyme involved in glycerophospholipid recycling/catabolism. This subfamily belongs to the UmpH/NagD phosphatase family, and to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	4.34174e-127

>NZ_LR594034.1|WP_003060137.1|1218701_1219160_-|nucleoside-diphosphate-kinase
MEQTFFMIKPDGVERGLVGEVLRRIERRGFTFERLELRQASPELLAKHYEALVTKPFYPELEAYMTSGPVLIGVLSGNRVISSWRTMMGVTNPKDALPGTIRGDFAQAPGDDGGIFNVVHGSDSRDSARREIALWFNQAELDSSAIFPKDNQ
>NZ_LR594034.1|WP_015017092.1|1216799_1218632_-|elongation-factor-4
MNSQHLKKRQEKIRNFSIIAHIDHGKSTLADRILEKTETVSSREMQAQLLDSMDLERERGITIKLNAIELNYTAKDGETYIFHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNDLEILPVINKIDLPAADPERVRHEVEDVIGLDASEAVLASAKAGIGIEEILEQIVEKVPAPTGDVDAPLQALIFDSVYDAYRGVILQVRIVNGIVKPGDKIQMMSNGKTFDVTEVGIFTPKAVGRDFLATGDVGYVAASIKTVADTRVGDTVTLANNPAKEALHGYKQMNPMVFAGIYPIESNKYNDLREALEKLQLNDASLQFEPETSQALGFGFRCGFLGLLHMDVIQERLEREFNIDLIMTAPSVVYHVHTTDGDMIEVSNPSEFPDPTRVASIEEPYVKAQIMVPQEFVGAVMELSQRKRGDFVTMDYIDDNRVNVIYQIPLAEIVFDFFDKLKSSTRGYASFDYEISEYRKSQLVKMDILLNGDKVDALSFIVHKEFAYERGKIIVEKLKKIIPRQQFEVPIQAAIGQKIVSRSDIKALRKNVLAKCYGGDVSRKRKLLEKQKAGKKRMKSIGSVEVPQEAFLSVLSMDEDAKK
>NZ_LR594034.1|WP_003062486.1|1216186_1216624_-|peptide-methionine-(R)-S-oxide-reductase-MsrB
METKDDLKKRIGDLSYEVTQHAATERPFTGKYDDFFEKGIYVDIVSGEVLFSSLDKFNSGCGWPAFSKPIENRMVTNHDDSSYGMRRVEVKSREAGSHLGHVFSDGPQEAGGLRYCINSAALKFIPYDQMEKEGYAQWLTLFDEK
>NZ_LR594034.1|WP_003059696.1|1215523_1216174_-|HD-domain-containing-protein
MTEKEVQLLAQAEAWVKEKLAADASGHDFWHVIRVCRLAKIIAQEEEGDVFICQLAALLHDMADDKLNADPKKARQNILAWLAGHDVSQKQSDQVMTIIDTISFKGGHGKPLTNLEAKIVQDADRLDAIGAIGIARCMVYSGHTGRLIHDPDRLPRETMTVEEYRKDGTAIMHFYEKLLTLKERMNTAYGRQLAEHRHQVLVSYLDEFYAEWDGLR
>NZ_LR594034.1|WP_003058431.1|1215085_1215316_-|bacteriocin
MNTKIFEKFDFMDNEKLAYIDGGAGSGKTVYQGNGLYCNKVKCWVNWAETWTTIANNSVMNVLTGGNAGWHSGGAL
>NZ_LR594034.1|WP_003058441.1|1214789_1215086_-|bacteriocin-immunity-protein
MSGLNWFSGGNERQQQASLLIKDLVADLKQSGGKEPLQKVLLSFDEELKRGESSIPFILSRMTVAVSTVLKEHQITLSAKESDQLDDLYALLQIRYGY
>NZ_LR594034.1|WP_138098521.1|1213430_1214600_-|DUF2974-domain-containing-protein
MATLLDYIKTNGHRDYHSLALNGLDVAVINEIGYLAFDELVADDNHLEATIKLSQLPLLQTREIKGTPYDFLNTKERLDLFQMMCQSKRFSELTLSHYINDINTEFEKQFAAMVFRLPSIDYTQLVFRGTDDSLIGWKEDFKLTYMREIPAHRSAIDYLKTYHTYYPNQKLVLSGHSKGGNLALYAASFVPKNVQASLKDIYLFDSPGLIKEFLTHPGYQAIRRRLVVIKPQDAIIGVMLYCDVPEKIVQSQSYGLLQHQMVNWQITPNAQFKRAPKRSALSYDLEETFKDWTNQLSKQDLKLLCDTFFDCLASSGITSLNVFSLDDKAFLTLMRVISSLQSIDHEKKKVMVKSLHQLMVTYGSYRRRDISENIHNHLQQLLTLTKGIK
>NZ_LR594034.1|WP_065355170.1|1212300_1213320_-|YeiH-family-putative-sulfate-export-transporter
MSTYLRKLPGLLLCLLLALPAWYLGRLFPIIGAPVFAILLGMLLALFYHHRDKTKEGISFTSKYILQTAVVLLGFGLNLTQIMAVGMQSLPIIVSTVATALLVAYGLQKWLGLDVNTATLVGVGSSICGGSAIAATAPVIKAKDDEIAKAISVIFLFNILAALLFPSLGQLLGLSNEGFAIFAGTAVNDTSSVTATATAWDAIHHSNTLDGATIVKLTRTLAILPITLGLSLYRAKKEHDIVTEEGFSLRKSFPRFILFFLLASLITTLMTSFGVSADVFHSLKTLSKFFIVMAMAAIGLNTNLVKLIKTGGQAILLGAICWVAITLVSLAMQLSLGIW
>NZ_LR594034.1|WP_003060515.1|1211668_1212094_-|PTS-mannose-transporter-subunit-IIA
MKRKFLIGSHGRLASGLQSSIDILAGMGQTLETIDAYVDDSDYTSRIDDFIAGVAADEQGLIFTDLLGGSVNQKMVTAVMNSGKDNIFLITNSNLATLLSLVFLKPGEALTKDEIVTVINESQVQLVDLVPETNSEDDFFD
>NZ_LR594034.1|WP_002989934.1|1211158_1211650_-|PTS-system-mannose/fructose/N-acetylgalactosamine-transporter-subunit-IIB
MITQIRVDDRLIHGQVAVVWTKELNAPLLVVANDEAAKNEITQMTLKMAVPNGMKLLIRSVEDSIKLFNDPRATDKRIFVIVNSVKDACAIAKEVPDLEAVNVANVGRFDKSDPASKVKVTPSLLLNPEEMAAAKELVSLPELDVFNQVLPSNTKVHLSQLVN
>NZ_LR594034.1|WP_003058436.1|1219941_1220604_-|type-II-A-CRISPR-associated-protein-Csn2
MNLNFPLLDEPIPLRGGTILVLEDVCVFSKIVQHCYQYEEDSELKFFDHKMKAIKESEIMLVTDILGFDVNSPTILKLIHADLESQFNEKPEVKSMIEKLVATITELIVFECLENELDLEYDEITILELIKSLGVKVETQSDTIFEKCLEILQIFKYLTKKKLLIFVNSGAYLTKDEVASLQEYISLTNLTVLFLEPRKLYDFPQYILDKDYFLITKNMV
>NZ_LR594034.1|WP_003058414.1|1220593_1220935_-|CRISPR-associated-endonuclease-Cas2
MSYRYMRMILMFDMPTDTAEERKVYRKFRKFLLSEGFIMHQFSIYSKLLLNNTANNAMIGRLRENNPHKGNITLLTVTEKQFARMIYLHGERNNCIANSDERLVFLGEAFDES
>NZ_LR594034.1|WP_138098523.1|1220931_1221801_-|type-II-CRISPR-associated-endonuclease-Cas1
MAGWRTVVVNTHSKLSYKNNHLIFKDAYKTELIHLSEIDILLLETTDIVLSTMLVKRLVDENVLVIFCDNKRLPTDMLMPFYGRHDSSLQLGKQMSWSEEVKSEVWTTIIAQKILNQSCYLGACSYFEKSQSIMDLYHGLELFDPSNREGHAARIYFNTLFGNDFSREQDNVINAGLDYGYTLLLSMFAREVVVSGCMTQFGLKHANQFNQFNFASDIMEPFRPLVDKIIFENRNQPFPKIKRELFTLFSDTFLYNGKEMYLTNIVSDYTKKVVKALNNEGKGVPEFRI
>NZ_LR594034.1|WP_138083893.1|1221800_1225916_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MDKKYSIGLDIGTNSVGWAVITDDYKVPSKKFKVLGNTDRHSIKKNLIGALLFDSGETAEATRLKRTARRRYTRRKNRIRYLQEIFSSEMSKVDDSFFHRLEESFLVEEDKKHERHPIFGNIVDEVAYHEKYPTIYHLRKKLADSTDKADLRLIYLALAHMIKFRGHFLIEGDLNPDNSDVDKLFIQLVQTYNQLFEENPINASRVDAKAILSARLSKSRRLENLIAQLPGEKRNGLFGNLIALSLGLTPNFKSNFDLAEDAKLQLSKDTYDDDLDNLLAQIGDQYADLFLAAKNLSDAILLSDILRVNSEITKAPLSASMIKRYDEHHQDLTLLKALVRQQLPEKYKEIFFDQSKNGYAGYIDGGASQEEFYKFIKPILEKMDGTEELLAKLNREDLLRKQRTFDNGSIPHQIHLGELHAILRRQEDFYPFLKDNREKIEKILTFRIPYYVGPLARGNSRFAWMTRKSEETITPWNFEEVVDKGASAQSFIERMTNFDKNLPNEKVLPKHSLLYEYFTVYNELTKVKYVTEGMRKPAFLSGEQKKAIVDLLFKTNRKVTVKQLKEDYFKKIECFDSVEISGVEDRFNASLGTYHDLLKIIKDKDFLDNEENEDILEDIVLTLTLFEDKEMIEERLKTYAHLFDDKVMKQLKRRHYTGWGRLSRKLINGIRDKQSGKTILDFLKSDGFANRNFIQLIHDDSLTFKEAIQKAQVSGQGHSLHEQIANLAGSPAIKKGILQSVKVVDELVKVMGHKPENIVIEMARENQTTQKGQKNSRERMKRIEEGIKELGSQILKEHPVENTQLQNEKLYLYYLQNGRDMYVDQELDINRLSDYDVDHIVPQSFIKDDSIDNKVLTRSDKNRGKSDNVPSEEVVKKMKNYWRQLLNAKLITQRKFDNLTKAERGGLSELDKAGFIKRQLVETRQITKHVAQILDSRMNTKYDENDKLIREVKVITLKSKLVSDFRKDFQFYKVREINNYHHAHDAYLNAVVGTALIKKYTKLESEFVYGDYKVYDVRKMIAKSEQEIGKATAKRFFYSNIMNFFKTEITLANGEIRKRPLIETNEETGEIVWDKGRDFATVRKVLSMPQVNIVKKTEVQTGALTNESIYARGSFDKLISRKHRFESSKYGGFGSPTVTYSVLVVAKSKVQDGKVKKIKTGKELIGITLLDKLVFEKNPLKFIEDKGYGNVQIDKCIKLPKYSLFEFENGTRRMLASVMANNNSRGDLQKANEMFLPAKLVTLLYHAHKIESSKELEHEAYILDHYNDLYQLLSYIERFASLYVDVEKNISKVKELFSNIESYSISEICSSVINLLTLTASGAPADFKFLGTTIPRKRYGSPQSILSSTLIHQSITGLYETRIDLSQLGGD
>NZ_LR594034.1|WP_041789030.1|1226392_1227022_-|TIGR01906-family-membrane-protein
MVENTKLLCSWLWLLALAILMTIYSAWLWYPLEVDHLKLEQVVFMSKDAILHNYNGLLNYLTNPFETSLTFASFRSSTDGLKHFADVKWLFHLTQVVFLGLLYPTVKDFKQRFKTKSFWSIQRPLMIAALFPLMIGLMASVIGFENFFTLFHKVLFVGDSNWLFDPLKDPVIWILPEVFFLHCFLFFMTVYEIILWSLVGLARWQRPKI
>NZ_LR594034.1|WP_003054515.1|1227021_1227786_-|TIGR01457-family-HAD-type-hydrolase
MPYKGYLIDLDGTIYQGKNRIPAGERFIKRLQEKGLPYLLVTNNTTRTPEMVQDMLSKQFNVETGIETIYTATMATVDYMNDMNRGKTAYVIGETGLKSAIAAAGYVEELENPAYVVVGLDSQVTYDMLATATLAIQKGALFIGTNPDLNIPTERGLMPGAGALNALLEAATRVKPVFIGKPNAIIMNKSLEVLGIQRSEAVMVGDNYLTDIMAGIQNDIATILVTTGFTRPEEVPTLPIQPDHVLSSLDEWRL
>NZ_LR594034.1|WP_046177080.1|1227785_1228538_-|acyl-[acyl-carrier-protein]-thioesterase
MGLSYREDIKLPFELCDVKSDIKFPLLLDYCLTVSGRQSAQLGRSNDYLLEQYGLIWIVTDYEATIHRLPHFQETITIETKALSYNKFFCYRQFYIYDQEGCLLVDILAYFALLNPDTRKVATIPEDLVAPFETDFVKKLHRVPKMPLLEQSIDRDYYVRYFDIDMNGHVNNSKYLDWMYDVLGYEFLKAHEPLRMTLKYVKEVSPGGQITSSYHLDQLTSYHQITSDGQLNAQAMIEWRAIKQTESEID
>NZ_LR594034.1|WP_003060113.1|1228547_1229678_-|oxygen-independent-coproporphyrinogen-III-oxidase
MSKKPTSAYVHIPFCTQICYYCDFSKVFIQNQPVDAYLEALIQEFESYDIHDLKTLYIGGGTPTAITAAQLEYLLSHLERNLNLDDLEEFTIEANPGDLTPDKIEVLKHSAVNRISLGVQTFNNKQLKQIGRSHNEEQIYSTIANLKTAGFHNISIDLIYALPGQTLAQVKENVAKALALDIPHLSLYSLILEHHTVFMNKMRRGKLNLPTEDLEAEMFEYIISEMEANGFEHYEISNFTKPGFESRHNLMYWDNVEYFGCGAGASGYLNGIRYQNRVPIQHYLKAVEAGNARLNEEVLRKEEMMEEELFLGLRKKTGVSIQRFQEKFDISFEERYGTIVRDLQDQGLLVKDDAFVRMTKKGLFLGDSVAERFILD
>NZ_LR594034.1|WP_002984855.1|1229739_1230381_-|hypothetical-protein
MTKQQIEKLADLLPPFAAKLYLDMIPEFQEGYASYVYQTQKEDTQNRRIKQLTKSFARLLDTPSFYVMPLSVQVGKQLLRNEEIACHSLSSVEAIQAFEAAVEDEKEVLQLLRNGSRLALLVLEEANETVHMDLGILTKVEQKVISPAMLTAIEEYLLATTEGNALQLTVTVEQGAARTFYQAHGFHQKADDLVFKPTDGKLICQMVKDLFKA
>NZ_LR594034.1|WP_003056620.1|1230504_1231860_-|phosphoglucosamine-mutase
MGKYFGTDGVRGEANVELTPELAFKLGRFGGYVLSQHETERPKVFVARDTRISGEMLESALIAGLLSVGIEVYKLGVLATPGVSYLVRTEKASAGVMISASHNPALDNGIKFFGNDGFKLADDQELEIEALLDAPKDTLPRPSAEGLGTLVDYPEGLRKYEKFLVTTGTDLSGMTVALDTANGAASVSARDVFLDLNAEIAVIGEKPNGLNINDGVGSTHPEQLQELVKETGADLGLAFDGDSDRLIAVDETGEIVDGDRIMFIIGKYLSEKGLLAHNTIVTTVMSNLGFHKALDKQGINKAITAVGDRYVVEEMRHSGYNLGGEQSGHVIIMDYNTTGDGQLTAIQLTKVMKETGKSLSELAAEVTIYPQKLVNIRVENSMKERAMEVPAIANIIAKMEDEMAGNGRILVRPSGTEPLLRVMAEAPTDAEVDYYVDTIADVVRTEIGCDN

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Crispr_ID: NZ_LR594034_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR594034_2

1487892-1488066

Orphan

Consensus_repeat	Method
AAAAAATTTTTATTAAAAAGCGGAA	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_LR594034_2

>merge|NZ_LR594034|2|1487892-1488066|CRISPRCasFinder
ATAAAATTTTTTTCAAAAAAAATAATCTTCCTTTATATAGCCAGAGGAAGATTATTTTCATGTATAACAAATTAAAAAAATTTTTATTAAAAAGCGGAAAATTTCACCCCAGTATTACCTATATAGGTGTAAGGGATGAAAACAACGATTCAAAAAATTTTTATTAAAAACCGGA

>NZ_LR594034|2|2|1487892-1488066|CRISPRCasFinder
ATAAAATTTTTTTCAAAAAAAATAA	TCTTCCTTTATATAGCCAGAGGAAGATTATTTTCATGTATAACAAATT
AAAAAAATTTTTATTAAAAAGCGGA	AAATTTCACCCCAGTATTACCTATATAGGTGTAAGGGATGAAAACAACGATT
CAAAAAATTTTTATTAAAAACCGGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR594034.1\|WP_138098640.1\|1497549_1499658_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|183088
NZ_LR594034.1\|WP_138098612.1\|1478987_1480244_-\|DNA-modification-methylase	unknown	unknown	gnl\|CDD\|319258
NZ_LR594034.1\|WP_138098628.1\|1489660_1490209_+\|DUF2815-family-protein	unknown	unknown	gnl\|CDD\|378531
NZ_LR594034.1\|WP_138098626.1\|1488534_1489656_+\|DUF2800-domain-containing-protein	unknown	unknown	gnl\|CDD\|378509
NZ_LR594034.1\|WP_138098618.1\|1483096_1483600_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594034.1\|WP_138098620.1\|1483592_1484969_-\|DEAD/DEAH-box-helicase	unknown	unknown	gnl\|CDD\|350771
NZ_LR594034.1\|WP_138098624.1\|1485515_1487801_-\|primase-C-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|273716
NZ_LR594034.1\|WP_138098622.1\|1484949_1485231_-\|VRR-NUC-domain-containing-protein	unknown	unknown	gnl\|CDD\|214959
NZ_LR594034.1\|WP_138098616.1\|1482684_1482912_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594034.1\|WP_172600600.1\|1490227_1490395_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594034.1\|WP_138098634.1\|1493448_1495317_-\|ImmA/IrrE-family-metallo-endopeptidase	unknown	unknown	gnl\|CDD\|368753
NZ_LR594034.1\|WP_138098614.1\|1481328_1482366_-\|methionine-adenosyltransferase	unknown	unknown	gnl\|CDD\|237106
NZ_LR594034.1\|WP_121792006.1\|1477734_1478991_-\|DNA-(cytosine-5-)-methyltransferase	unknown	unknown	gnl\|CDD\|238192
NZ_LR594034.1\|WP_138098636.1\|1495407_1495749_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594034.1\|WP_138098632.1\|1492438_1493044_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594034.1\|WP_121792005.1\|1480961_1481327_-\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|238038
NZ_LR594034.1\|WP_014638129.1\|1482413_1482596_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594034.1\|WP_121792001.1\|1488218_1488542_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LR594034.1\|WP_138098630.1\|1490443_1492399_+\|DNA-polymerase	unknown	unknown	gnl\|CDD\|176479
NZ_LR594034.1\|WP_138098638.1\|1496059_1497535_-\|LlaJI-family-restriction-endonuclease	unknown	unknown	gnl\|CDD\|370562

Protein	Function_ID	Function_description	E-value
NZ_LR594034.1\|WP_138098640.1\|1497549_1499658_-\|AAA-family-ATPase	gnl\|CDD\|183088	PRK11331, PRK11331, 5-methylcytosine-specific restriction enzyme subunit McrB; Provisional.	8.33454e-13
NZ_LR594034.1\|WP_138098612.1\|1478987_1480244_-\|DNA-modification-methylase	gnl\|CDD\|319258	cd16401, ParB_N_like_MT, ParB N-terminal-like domain, some attached to C-terminal S-adenosylmethionine-dependent methyltransferase domain. This family represents domains related to the N-terminal domain of ParB, a DNA-binding component of the prokaryotic parABS partitioning system, fused to a variety of C-terminal domains, including S-adenosylmethionine-dependent methyltransferase-like domains. parABS contributes to the efficient segregation of chromosomes and low-copy number plasmids to daughter cells during prokaryotic cell division. The process includes the parA (Walker box) ATPase, the ParB DNA-binding protein and a parS cis-acting DNA sites. Binding of ParB to centromere-like parS sites is followed by non-specific binding to DNA ("spreading", which has been implicated in gene silencing in plasmid P1) and oligomerization of additional ParB molecules near the parS sites. It has been proposed that ParB-ParB cross-linking compacts the DNA, binds to parA via the N-terminal region, and leads to parA separating the ParB-parS complexes and the recruitment of the SMC (structural maintenance of chromosomes) complexes. The ParB N-terminal domain of Bacillus subtilis and other species contains a Arginine-rich ParB Box II with residues essential for bridging of the ParB-parS complexes. The arginine-rich ParB Box II consensus (I[VIL]AGERR[FYW]RA[AS] identified in several species is partially conserved with this family and related families. Mutations within the basic columns particularly debilitate spreading from the parS sites and impair SMC recruitment. The C-terminal domain contains a HTH DNA-binding motif and is the primary homo-dimerization domain, and binds to parS DNA sites. Additional homo-dimerization contacts are found along the N-terminal domain, but dimerization of the N-terminus may only occur after concentration at ParB-parS foci.	6.81108e-38
NZ_LR594034.1\|WP_138098628.1\|1489660_1490209_+\|DUF2815-family-protein	gnl\|CDD\|378531	pfam10991, DUF2815, Protein of unknown function (DUF2815). This is a phage related family of proteins with unknown function.	9.95757e-87
NZ_LR594034.1\|WP_138098626.1\|1488534_1489656_+\|DUF2800-domain-containing-protein	gnl\|CDD\|378509	pfam10926, DUF2800, Protein of unknown function (DUF2800). This is a family of uncharacterized proteins found in bacteria and viruses. Some members of this family are annotated as being Phi APSE P51-like proteins.	0
NZ_LR594034.1\|WP_138098620.1\|1483592_1484969_-\|DEAD/DEAH-box-helicase	gnl\|CDD\|350771	cd18013, DEXQc_bact_SNF2, DEXQ-box helicase domain of bacterial SNF2 family proteins. Proteins belonging to the SNF2 family of DNA dependent ATPases are important members of the chromatin remodeling complexes that are implicated in epigenetic control of gene expression. The Snf2 family comprise a large group of ATP-hydrolyzing proteins that are ubiquitous in eukaryotes, but also present in eubacteria and archaea. The bacterial SNF2 present in this family are members of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	2.15581e-102
NZ_LR594034.1\|WP_138098624.1\|1485515_1487801_-\|primase-C-terminal-domain-containing-protein	gnl\|CDD\|273716	TIGR01613, putative_primase, phage/plasmid primase, P4 family, C-terminal domain. This model represents a clade within a larger family of proteins from viruses of bacteria and animals. Members of this family are found in phage and plasmids of bacteria and archaea only. The model describes a domain of about 300 residues, found generally toward the protein C-terminus. [DNA metabolism, DNA replication, recombination, and repair, Mobile and extrachromosomal element functions, Prophage functions].	7.29922e-70
NZ_LR594034.1\|WP_138098634.1\|1493448_1495317_-\|ImmA/IrrE-family-metallo-endopeptidase	gnl\|CDD\|368753	pfam06114, Peptidase_M78, IrrE N-terminal-like domain. This entry includes the catalytic domain of the protein ImmA, which is a metallopeptidase containing an HEXXH zinc-binding motif from peptidase family M78. ImmA is encoded on a conjugative transposon. Conjugating bacteria are able to transfer conjugative transposons that can, for example, confer resistance to antibiotics. The transposon is integrated into the chromosome, but during conjugation excises itself and then moves to the recipient bacterium and re-integrate into its chromosome. Typically a conjugative tranposon encodes only the proteins required for this activity and the proteins that regulate it. During exponential growth, the ICEBs1 transposon of Bacillus subtilis is inactivated by the immunity repressor protein ImmR, which is encoded by the transposon and represses the genes for excision and transfer. Cleavage of ImmR relaxes repression and allows transfer of the transposon. ImmA has been shown to be essential for the cleavage of ImmR. This domain is also found in in metalloprotease IrrE, a central regulator of DNA damage repair in Deinococcaceae, HTH-type transcriptional regulators RamB and PrpC.	0.00953535
NZ_LR594034.1\|WP_138098614.1\|1481328_1482366_-\|methionine-adenosyltransferase	gnl\|CDD\|237106	PRK12459, PRK12459, S-adenosylmethionine synthetase; Provisional.	0
NZ_LR594034.1\|WP_121792006.1\|1477734_1478991_-\|DNA-(cytosine-5-)-methyltransferase	gnl\|CDD\|238192	cd00315, Cyt_C5_DNA_methylase, Cytosine-C5 specific DNA methylases; Methyl transfer reactions play an important role in many aspects of biology. Cytosine-specific DNA methylases are found both in prokaryotes and eukaryotes. DNA methylation, or the covalent addition of a methyl group to cytosine within the context of the CpG dinucleotide, has profound effects on the mammalian genome. These effects include transcriptional repression via inhibition of transcription factor binding or the recruitment of methyl-binding proteins and their associated chromatin remodeling factors, X chromosome inactivation, imprinting and the suppression of parasitic DNA sequences. DNA methylation is also essential for proper embryonic development and is an important player in both DNA repair and genome stability.	8.03752e-58
NZ_LR594034.1\|WP_121792005.1\|1480961_1481327_-\|HNH-endonuclease	gnl\|CDD\|238038	cd00085, HNHc, HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic proteins. The alignment includes members of the large group of homing endonucleases, yeast intron 1 protein, MutS, as well as bacterial colicins, pyocins, and anaredoxins.	2.81485e-07
NZ_LR594034.1\|WP_138098622.1\|1484949_1485231_-\|VRR-NUC-domain-containing-protein	gnl\|CDD\|214959	smart00990, VRR_NUC, This model contains proteins with the VRR-NUC domain. It is associated with members of the PD-(D/E)XK nuclease superfamily, which include the type III restriction modification enzymes, for example StyLTI.	1.31476e-11
NZ_LR594034.1\|WP_138098630.1\|1490443_1492399_+\|DNA-polymerase	gnl\|CDD\|176479	cd08642, DNA_pol_A_pol_I_A, Polymerase I functions primarily to fill DNA gaps that arise during DNA repair, recombination and replication. Family A polymerase (polymerase I) functions primarily to fill DNA gaps that arise during DNA repair, recombination and replication. DNA-dependent DNA polymerases can be classified in six main groups based upon phylogenetic relationships with E. coli polymerase I (classA), E. coli polymerase II (class B), E.coli polymerase III (class C), euryarchaaeota polymerase II (class D), human polymerase beta (class x), E. coli UmuC/DinB and eukaryotic RAP 30/Xeroderma pigmentosum variant (class Y). Family A polymerase are found primarily in organisms related to prokaryotes and include prokaryotic DNA polymerase I ,mitochondrial polymerase delta, and several bacteriphage polymerases including those from odd-numbered phage (T3, T5, and T7). Prokaryotic Pol Is have two functional domains located on the same polypeptide; a 5'-3' polymerase and 5'-3' exonuclease. Pol I uses its 5' nuclease activity to remove the ribonucleotide portion of newly synthesized Okazaki fragments and DNA polymerase activity to fill in the resulting gap. A combination of phylogenomic and signature sequence-based (or phonetic) approaches is used to understand the evolutionary relationships among bacteria. DNA polymerase I is one of the conserved proteins that is used to search for protein signatures. The structure of these polymerases resembles in overall morphology a cupped human right hand, with fingers (which bind an incoming nucleotide and interact with the single-stranded template), palm (which harbors the catalytic amino acid residues and also binds an incoming dNTP) and thumb (which binds double-stranded DNA) subdomains.	0
NZ_LR594034.1\|WP_138098638.1\|1496059_1497535_-\|LlaJI-family-restriction-endonuclease	gnl\|CDD\|370562	pfam09563, RE_LlaJI, LlaJI restriction endonuclease. This family includes the LlaJI (recognizes GACGC) restriction endonucleases.	1.19628e-54

>NZ_LR594034.1|WP_138098624.1|1485515_1487801_-|primase-C-terminal-domain-containing-protein
MQFTLSHSGQTGVQTTTVYPNQVKVTDEVSLKNVSKYDHVSGQFLNNTRSNTNFIKSDVLVMDIDNDHSENPDEWMTVERLKEIFSDYNFALVTSRSHMQAKAGKTPRPKFHIYFQINEVTDKDIYVAMKEELCNQYKFFDDHAKDAARFFFGNPNAQIIWHDSWLTIDEDLFQVVSIEDEEDFDADFYTPPSGPIQQGSRNSTMSVFAAKIVKRIGVTQEARDGFDEQAEKCEPPLDKAELDTIWGSAVRFYNRTIKTSKGYVAPDAFNRETLKPDDYSDVGEAGVLAREYANRLAYTNATDYLYYDGTHWRENKQLALGAVVHFTDEQLAEANALLESAEKQLQSSGIDELTIKAGGKRLENAVETPFQLKYLKAYLAAKEFHKFVMKHRDYKNLMAVYNTAKPMLSVELSELDSDDLLLNTPESTYDLRKGINGSQEHNPEDYITKITAISPSDQGMGLWQETLATFFCNDQELIDYVQEIIGMAAIGKVYQEHMIIAYGGGANGKSTFWNTIARVLGSYSGKLSADALTMSNKRNVSPELAELKGKRLVIASEMAEGMRLNTAVVKQITSTDEIQAEKKYKDPFHFVPSHTLVLYTNHLPKVGANDDGTWRRLVVIPFNAKITGRSDIKNFADHLYDNAAPAILSWIIEGAEKAIKANFKTKVPTAVSASVKAYREANDWLGHFLSDCCQVGDQLTEKSGELYSQYRAYCAKNMEYTRSTTDFYSALDQTGFKRKRTSKGNLILGLQLVDDGYDFLD
>NZ_LR594034.1|WP_138098622.1|1484949_1485231_-|VRR-NUC-domain-containing-protein
MREKYVEQALVKSVKARGGICPKWVSPSFSGVPDRLVFLPKGKFGLVEVKAPDQKPRMLQVSRHKLFERLGFTVYVIDRIEMIGEVLDEIDIT
>NZ_LR594034.1|WP_138098620.1|1483592_1484969_-|DEAD/DEAH-box-helicase
MKLTLHNYQVVAKDFIIGHPYAAVILDMGMGKTATTLSAVNELMFDRFEVTKVLVIAPLRVANTVWSDEIEQWAELRHLRYSKIVGTPKQRKVALQKDADVYIVNRENLPWLVEQCSPYFKWDMVVIDELSSFKSWQSKRFKAFMAMRPYMKRIVGLTGTPSSNGLMDLFAEFKVIDGGERLGRFIGEFRSRYFEEGRRNGSIVYEYIPMDYAECQIQDKISDITISMKALDYLDMPDLISTKKLVRMSEKEKEKYSQFKKEYVLSELDGLEVTAANAASLTNKLVQLSNGAVYSDDHTVVPLHEQKLDALEDILESANGEPVLVAYWFKHDLARIIGRLEKLKVKSRVLKTEEDIREWNKGNVPVGILHPASAGHGLNLQKGGHHLVWFGLTWSLELYQQTNARLWRQGQEAETVVIQHIVTEGTIDEEILKALENKDAQQERLIEAVKAQVGGTDG
>NZ_LR594034.1|WP_138098618.1|1483096_1483600_-|hypothetical-protein
MDKVEYIAKNYRDMKMKLQLVQEKLLNYRPISENSVIQSLVFEKSEHEKVKNSKNHGRSELISLSFREKQEQENQEYLNSLLNTYYCLKMDLYYFEFVMDLIPEDLKPLAKDLIYLGKSWTELEEIYEISHSTLAYRRRKILKQLRKCYRWTSKSLELKVEDYHIPI
>NZ_LR594034.1|WP_138098616.1|1482684_1482912_-|hypothetical-protein
MWTEGRIDYQGQKVDYIAKVSPQPSEFGIDLGCVFKLDIEVAEETIVSYDRGWEIYPETEEGEAILEAVLLVLTV
>NZ_LR594034.1|WP_014638129.1|1482413_1482596_-|hypothetical-protein
MTKRQEEKLNALLTEIAKEELLVETLEKRWSDNLDFYDVSVWGIKRALERAYEAGRQSVK
>NZ_LR594034.1|WP_138098614.1|1481328_1482366_-|methionine-adenosyltransferase
MIISSEQVSVGHPDKICDQISDAILTECLKYDKSSRVAVEALIKDNHVVVAGEISTKHFFNLENIVRQVVEPLGLKNVQVTNLLGLQSSDISQGVDIGGAGDQGMMFGYATDETPEYLPLPYVLATRVLEKLMSLGHPLLGKDAKAQVSYDYEKKRIDTFLVSIQHTETADLAKVKRIVTEAMMSVALRYRQNLDFKVLVNPTGRFVLGGSFADAGVTGRKIVADTYGGFAHHGGGAFSGKDPSKVDRSAAYMARKIAKDIVREGDAKRCEVQLAYAIGVAEPVSVHVETFGTSRYTTKQLEGMIGERYELTPRGIIKELHLLNVDYTKTSCFGHFTKDYLPWEK
>NZ_LR594034.1|WP_121792005.1|1480961_1481327_-|HNH-endonuclease
MPRRPSMPCKQNGCPNLVPYGHKYCDNHKANNQLDAKSTKAKGYNAKWNKVRLRYLKVHPLCVQCKAKGRLTKATVVDHITPHRGDQELFWNQSNWQALCKSCHDRKTKTTDRYVEYTYRF
>NZ_LR594034.1|WP_138098612.1|1478987_1480244_-|DNA-modification-methylase
MTTQPNMEIKELQLSDLKPASYNPRKKLQKGDKEYEKIKQSLLKFGYVDPIIVNDDLTVIGGHQRLTVLKDLKYETAKCVIVSLSKEDEKALNIALNKITGQWDDQLLADLILDLQDSDFNLDLTGFEAPEIEDILSNVYDKDVMEDDFDVDEELKKPTIARRGDIWQLGKHKVICGDSTNPETYRLLMGDKKANLVVTDPPYNVDVEETAGKIMNDNMSDSDFYQFLFSMFSNVEQSMESDASIYVFHADTEGLNFRKSFKDAGFYLSGCCIWKKNALVLGRSPYQWQHEPCLFGWKQKGKHQWFSDRKQTTIWEYDRPKSSKDHPTMKPIQLMAYPIQNSSMRGTIVLDPFLGSGSTLIAADQTGRVCYGIELDEKFVDVIVKRFIEATESKDISVIRDGKEMMYDQIVNGVEGNI
>NZ_LR594034.1|WP_121792006.1|1477734_1478991_-|DNA-(cytosine-5-)-methyltransferase
MSLTFIDFFAGVGGFRKGLELAGMTCLGYCEKDKFARKSYEAMYDTKGEWFSDDITSIEPARLPKADLWTAGSPCQNVSIAGKRAGLYGERSGLFFTFVDLLKSQKEEDKPEWVLLENVKGLLSSSGGRDYLDYLLELEQAGYELEWQVFNSKDYGVPQNRERIYTLGHLRSRGRRQVLPVSRESGSHLKQLVGGMQSYRVYDPAGIATTLVGEGGGVGAKTGLYLIDQSTTAPKVTEEARCLTARYTAGSTKRTAMNSAVLEVQPILTPDRVKKRQNGRRLKEQNEPMFTLTSQDRHGILEGIKVRNGTKKGYQVAELGDSVDLSYPNSPTRRARVGKGIAHNLSCSGQMGAVVWNNKVVKIRRLTPRECFRLQGFSDDLFEKAQAVNSDAQLYKQAGNGVTVPVVYAIACAILSSK
>NZ_LR594034.1|WP_121792001.1|1488218_1488542_+|hypothetical-protein
MSKMKELNRLIHDMEETAKYYLRLVDEFKKLLSNDDETVPKPISPKSEPQREIQLEDVRAVLATKAKDGFKNEVRALLNAYSASSLSALDPKHFAAVLEEAGGIGND
>NZ_LR594034.1|WP_138098626.1|1488534_1489656_+|DUF2800-domain-containing-protein
MTNHAILSASASHRWLNCPPSVRLTEDIPDETSEFALEGTDAHELCAYLVEKSLGRNARDPTEDLTFYNDEMQDCAEEYRNYVMEQVEKAKGYSRDPTVLVEQRLDFSKWVPEGFGTGDCLIVADGLLQVIDYKHGLGVLVDADHNPQMMCYALGALEMFDGLYDVDKVTLTIFQPRKHNISTFEIEKTELLEWAENELAPKAELAFKGGGERESGKHCQFCKLKNVCRKRAEDNLALAKMEFANPDTLDNKDIAEILPKLDLLISWANDIKAYALNQATDGHHIPGYKLVEGRSVRKFSDESAVSQAVMEAGFDPFEKKLLTITAMTKLLGKKTFNDLLGGLIIKPSGKPTLVPIDDSRQEMNLAKHEFKED
>NZ_LR594034.1|WP_138098628.1|1489660_1490209_+|DUF2815-family-protein
MTTKVITGPNTRFSYLNANEPKSINGSTPKYSASLIIPKEDTITINKIKAAIEQAYKEGESKLKGNGKSVPALSTLKTPLRDGDLERPDDEAYKNAYFVNANSPHKPGVVDGNRQEIIDTSELYSGIYGRASITFYAFNSNGNKGIACGLNNLQKLRDGEPLGGRTRAEDDFATEDDDDFLN
>NZ_LR594034.1|WP_172600600.1|1490227_1490395_+|hypothetical-protein
MMYTILTCTIMGLWVLIGLYFGYMTIRDDIRNEMERRAKRNKEKLSQTPLSRKNK
>NZ_LR594034.1|WP_138098630.1|1490443_1492399_+|DNA-polymerase
MPIKEISIDIETYCEIDLRKSGVYRYAEDDSFEILLFAVSVNNRPVTVYDLTKEKLPQDILEALVDDRVIKWAFNATFERICLSNWLKKYHPELILDGFLSPNSWRCSMIWSAYLGLPLSLEGVGTVLKLKDQKMREGADLIRYFCVPCKPTKVNGGRLRNFPHHAPDKWSTFIDYNRRDVEVELAIKERLKNFPVPDFVWDEYLQDQIINDRGIGIDLDFVNAAIKIDSESKAKIQEELKALTGVENPNSVLQMIGWLREHGVSTDSLDKKAVKELLKTVDKTTAQVLKLRQQVAKSSVSKYQAMMNCVCKDGRARGMFQFYGANRTGRWAGRLVQLQNLPQNHLPDLEEARELFRTGDLEPTELLYDTQNTLSQLIRTAFVPSEGKKFIVCDFSAIEARVLSHLAGERWRNKVFEQGRDIYCMSASQMFGVPVEKHGQNSELRQKGKIAELACGYGGSVGALKAMGALDMGLNEEELQPLVNSWRLANPNIVLYWWDVDNAVKTAVKELTPTSTHGIQFEVKSGILFITLPSGRKLSYIKPRIGDNQFGGESVTYEGTGTAKRWERLKSYGPKFVENIVQAISRDILAYSIKQLKSFQIVGHVHDEVIIECDMEQRLDEIASLMGIAPDWMSDINLHADGYECLFYQKD
>NZ_LR594034.1|WP_138098632.1|1492438_1493044_-|hypothetical-protein
MSINEQNTNSKYTPESYRNEKPYNDIPCEEGEVLIPIVVMNNDMIKAMGINRSNMKTARMKNGSRVPVAYAPVKLEHFNNALKIYYKDVNIYLNQYKSDSAVLSLEEMMENMNNENKMGYDPTGIPSHEEKLMLIVTLEELIDVVYQRNEKYGKILKLIYDDFTISKKEIIKKLGLKKTQGYDAIKKAHALAKEVYKELNQ
>NZ_LR594034.1|WP_138098634.1|1493448_1495317_-|ImmA/IrrE-family-metallo-endopeptidase
MFDKYIFDTYQDLIIKTVRGFIFNNKDNTDLSTYMVSEPNGYIEFDDFELYKIYYEVVDNSKLKLEIIVIADVIVRQYIKGEMELDTKSKYVSVYVDMELDSGIKVFNIYNAEFKSDQYKKTKNLMLSRDWVPYIPKKEFDNIAESFLKKYYPVALRQPTPIPVELIVAEMGLSIHREKLTLDDSVFGKMVFKDTKVEVIENNQLVSKPFSKGSILVDKDVVYKRNVGSFNNTVIHECVHWELHKVFHEVRMILDNKYSVASSWTEDNLADSSMWSPLDWMEWHANGIAPRILMPKVQTKIKIRELFQTLTLVNPDISRSELVREVVDELAEFFNVSKQAAKIRMIDLGFKEANGVYNYLDDRYMHNFAFELEAFDNGSSYTITSNDLCFEYCFNESFRQIIDGNKFLYIDNHLCLKDKKYISMTKDGPVMTDYAYEHMDECCLLFKVKSKKYTTISDEDYYDYVLNRGVTRESEIKADFVEILQNPSLMDQLPPLEMVRLSKNISDLLKELPFEFSGTLRSHRKRKKCSQPLLANIVGITEKTLRGYETKEDNLPKLELALAFCFALKLMPPISEDMLEKAGHKLTKIHQHQVYKLLLSTSYYKPLAEINTILQAAQMKTL
>NZ_LR594034.1|WP_138098636.1|1495407_1495749_+|hypothetical-protein
MTTITDILDEIKAYIMRQEFVKKYFKSNGNSNGCKKLFDEELISNLKSKYQHEYMEFNLITGQHFPTMDILIDGNKYRVELKSSQKGELSIPGNSTLESQTDDDCYIIWTGSE
>NZ_LR594034.1|WP_138098638.1|1496059_1497535_-|LlaJI-family-restriction-endonuclease
MKVVYCREEFGYNFEEFACLLFPNDETNADEVTDILTRLKRVNVISKVKGTRDVKNHKSDLSDIDDDVADVLEIDSSAKETLYKFKFVGLIVVKSFIIYCFPKYIEIDYSHIPSDIQFAEFKQVIKVIEKYSKSNREQEIYSLYDIDESFAYSDMSVSLFLLEDFFLNGLYSHQESIIENNGEGEILWDKTVNESFAFFTDNRPIYLDYFNRRSVVEDDNLIKKLHEIVLSRISRTLEENGLLELLDLTQINFTDANLIDLGDLDYILYVIESELSQEFNTRKQLLLKALYSYISQKYVAEKAEFVTLFGTNSYCGIWETVCAKVLNDKLDVTIYDVSLEPTGTNTKHTRIKNIIDKPQWIQNEDKCIETATLIPDIITVFNNKLLILDGKYYNLKFDTNTIAGNPGVGDVTKQFLYALAYREFAEKNNLVIENYFLMPTETETDLNFAQVEMQLLNNLGLSSVKVAKLNAPNIYHKYLNDELDQELLSKF
>NZ_LR594034.1|WP_138098640.1|1497549_1499658_-|AAA-family-ATPase
MKVYLRKLTPNDTNRQIETTKEAFIAFFGGQTGQDVNFSLTAPNGASGTFRVSLANGRANSYRFAKATSGGSSLGTFLQNNVAAYRPNDILKITNNGQINQVEIIKPNDPEYMGISSLIQLRQNPTLIIDDYYFSDSIFNIASYIRYKVDELDLHQEIDDFNSELDDKRNSFLSKFSVQSLKAIPTHNLDNKLFGKKDDDSLAYHLCDNVDFNLFGSARQGNTTRVSWNGSDFVQYIKNIDDYIQSVGTISTLDEYEELWTFMSDQPNNYYSQRIWVRKYLHILYPEIFVSQFSEENKKSIFNKLRLVPETDEIKNVFRLSKLSELAQIPTDYFWPLVDKIDKTANDTSQVLQVNAVDIEQLYLTKCGVKNSYNYNRIFFGAPGTGKSFKLDIERKELLENGGDYERVTFHPDYSYSQFVGSYKPVPIVKDGEEKITYEYVPGPFMRILVKALLNSETSNPYLLVIEEINRANVAAVFGEVFQLLDRKDGISEYAITLSEDMKKYIVKEFDASGISLDVASLTDIKLPDNLFIWSTMNSADQGVFPMDTAFKRRWDFKYFGIDEEEQKVSSYETSYGLNWNKLRKAINELLSTDKFKINEDKLMGPFFVNPEKITSNNSYNMDNKKFNEVFKNKVIMYLFDDAVKQRRGQLFASGLTRYSQICTKFDSNFEDDGSLKAGREIGDLFDIFQEKDTLLLSYNSY

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Crispr_ID: NZ_LR594034_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LR594034_3

1820488-1820565

Orphan

Consensus_repeat	Method
ACCACTCGCTCTTTGTCTCTAGGCTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LR594034_3

>merge|NZ_LR594034|3|1820488-1820565|CRISPRCasFinder
ACCACTCGCTCTTTGTCTCTAGGCTCATAGGCTAAAAACGTTCACTGAACGTACCACTCGCTCTTTGTCGCTAGGCTC

>NZ_LR594034|3|3|1820488-1820565|CRISPRCasFinder
ACCACTCGCTCTTTGTCTCTAGGCTC	ATAGGCTAAAAACGTTCACTGAACGT
ACCACTCGCTCTTTGTCGCTAGGCTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LR594034.1\|WP_003061134.1\|1825589_1826297_-\|histidine-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|223483
NZ_LR594034.1\|WP_003059834.1\|1824290_1824860_-\|glucosaminidase-domain-containing-protein	unknown	unknown	gnl\|CDD\|224619
NZ_LR594034.1\|WP_003052521.1\|1816791_1817226_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_LR594034.1\|WP_003052530.1\|1822537_1823080_-\|nucleotide-exchange-factor-GrpE	unknown	unknown	gnl\|CDD\|237628
NZ_LR594034.1\|WP_046177774.1\|1820593_1822420_-\|molecular-chaperone-DnaK	unknown	unknown	gnl\|CDD\|234715
NZ_LR594034.1\|WP_138098812.1\|1819685_1820375_-\|DJ-1/PfpI-family-protein	unknown	unknown	gnl\|CDD\|153234
NZ_LR594034.1\|WP_065355367.1\|1829513_1830980_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA	unknown	unknown	gnl\|CDD\|234572
NZ_LR594034.1\|WP_138084018.1\|1815816_1816791_-\|ketoacyl-ACP-synthase-III	unknown	unknown	gnl\|CDD\|236475
NZ_LR594034.1\|WP_003056654.1\|1814361_1815333_-\|enoyl-[acyl-carrier-protein]-reductase-FabK	unknown	unknown	gnl\|CDD\|132195
NZ_LR594034.1\|WP_003052523.1\|1817302_1818094_-\|enoyl-CoA-hydratase	unknown	unknown	gnl\|CDD\|180910
NZ_LR594034.1\|WP_003045024.1\|1815531_1815756_-\|acyl-carrier-protein	unknown	unknown	gnl\|CDD\|179197
NZ_LR594034.1\|WP_003053883.1\|1824856_1825600_-\|D-alanyl-D-alanine-carboxypeptidase-family-protein	unknown	unknown	gnl\|CDD\|224788
NZ_LR594034.1\|WP_003052513.1\|1812670_1813405_-\|3-oxoacyl-[acyl-carrier-protein]-reductase	unknown	unknown	gnl\|CDD\|235500
NZ_LR594034.1\|WP_138098814.1\|1826909_1827851_-\|EamA-family-transporter	unknown	unknown	gnl\|CDD\|273359
NZ_LR594034.1\|WP_084916748.1\|1811423_1812656_-\|beta-ketoacyl-ACP-synthase-II	unknown	unknown	gnl\|CDD\|235987
NZ_LR594034.1\|WP_003052537.1\|1826602_1826839_-\|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	unknown	unknown	gnl\|CDD\|225170
NZ_LR594034.1\|WP_003052542.1\|1828074_1829514_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB	unknown	unknown	gnl\|CDD\|235489
NZ_LR594034.1\|WP_003060169.1\|1818315_1819452_-\|molecular-chaperone-DnaJ	unknown	unknown	gnl\|CDD\|237653
NZ_LR594034.1\|WP_003053834.1\|1823121_1824156_-\|heat-inducible-transcriptional-repressor-HrcA	unknown	unknown	gnl\|CDD\|234621
NZ_LR594034.1\|WP_138098724.1\|1813416_1814337_-\|ACP-S-malonyltransferase	unknown	unknown	gnl\|CDD\|223408

Protein	Function_ID	Function_description	E-value
NZ_LR594034.1\|WP_003061134.1\|1825589_1826297_-\|histidine-phosphatase-family-protein	gnl\|CDD\|223483	COG0406, phoE, Broad specificity phosphatase PhoE and related phosphatases [General function prediction only].	2.18688e-51
NZ_LR594034.1\|WP_003059834.1\|1824290_1824860_-\|glucosaminidase-domain-containing-protein	gnl\|CDD\|224619	COG1705, FlgJ, Muramidase (flagellum-specific) [Cell motility and secretion / Intracellular trafficking and secretion].	1.24242e-44
NZ_LR594034.1\|WP_003052521.1\|1816791_1817226_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	1.68173e-21
NZ_LR594034.1\|WP_003052530.1\|1822537_1823080_-\|nucleotide-exchange-factor-GrpE	gnl\|CDD\|237628	PRK14156, PRK14156, heat shock protein GrpE; Provisional.	1.77266e-95
NZ_LR594034.1\|WP_046177774.1\|1820593_1822420_-\|molecular-chaperone-DnaK	gnl\|CDD\|234715	PRK00290, dnaK, molecular chaperone DnaK; Provisional.	0
NZ_LR594034.1\|WP_138098812.1\|1819685_1820375_-\|DJ-1/PfpI-family-protein	gnl\|CDD\|153234	cd03140, GATase1_PfpI_3, Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus. Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus. PfpI is an ATP-independent intracellular proteases which may hydrolyze small peptides to provide a nutritional source. Only Cys of the catalytic triad typical of GATase1 domains is conserved in this group. This Cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow.	1.08228e-24
NZ_LR594034.1\|WP_065355367.1\|1829513_1830980_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA	gnl\|CDD\|234572	PRK00012, gatA, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA.	0
NZ_LR594034.1\|WP_138084018.1\|1815816_1816791_-\|ketoacyl-ACP-synthase-III	gnl\|CDD\|236475	PRK09352, PRK09352, beta-ketoacyl-ACP synthase 3.	3.457e-172
NZ_LR594034.1\|WP_003056654.1\|1814361_1815333_-\|enoyl-[acyl-carrier-protein]-reductase-FabK	gnl\|CDD\|132195	TIGR03151, enACPred_II, putative enoyl-[acyl-carrier-protein] reductase II. This oxidoreductase of the 2-nitropropane dioxygenase family (pfam03060) is commonly found in apparent operons with genes involved in fatty acid biosynthesis. Furthermore, this genomic context generally includes the fabG 3-oxoacyl-[ACP] reductase and lacks the fabI enoyl-[ACP] reductase.	1.35192e-171
NZ_LR594034.1\|WP_003052523.1\|1817302_1818094_-\|enoyl-CoA-hydratase	gnl\|CDD\|180910	PRK07260, PRK07260, enoyl-CoA hydratase; Provisional.	0
NZ_LR594034.1\|WP_003045024.1\|1815531_1815756_-\|acyl-carrier-protein	gnl\|CDD\|179197	PRK00982, acpP, acyl carrier protein; Provisional.	2.82996e-19
NZ_LR594034.1\|WP_003053883.1\|1824856_1825600_-\|D-alanyl-D-alanine-carboxypeptidase-family-protein	gnl\|CDD\|224788	COG1876, VanY, D-alanyl-D-alanine carboxypeptidase [Cell envelope biogenesis, outer membrane].	2.61831e-54
NZ_LR594034.1\|WP_003052513.1\|1812670_1813405_-\|3-oxoacyl-[acyl-carrier-protein]-reductase	gnl\|CDD\|235500	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated.	2.36053e-129
NZ_LR594034.1\|WP_138098814.1\|1826909_1827851_-\|EamA-family-transporter	gnl\|CDD\|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	1.16791e-22
NZ_LR594034.1\|WP_084916748.1\|1811423_1812656_-\|beta-ketoacyl-ACP-synthase-II	gnl\|CDD\|235987	PRK07314, PRK07314, beta-ketoacyl-ACP synthase II.	0
NZ_LR594034.1\|WP_003052537.1\|1826602_1826839_-\|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	gnl\|CDD\|225170	COG2261, COG2261, Predicted membrane protein [Function unknown].	1.96369e-12
NZ_LR594034.1\|WP_003052542.1\|1828074_1829514_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB	gnl\|CDD\|235489	PRK05477, gatB, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB.	0
NZ_LR594034.1\|WP_003060169.1\|1818315_1819452_-\|molecular-chaperone-DnaJ	gnl\|CDD\|237653	PRK14276, PRK14276, chaperone protein DnaJ; Provisional.	0
NZ_LR594034.1\|WP_003053834.1\|1823121_1824156_-\|heat-inducible-transcriptional-repressor-HrcA	gnl\|CDD\|234621	PRK00082, hrcA, heat-inducible transcription repressor; Provisional.	5.13091e-115
NZ_LR594034.1\|WP_138098724.1\|1813416_1814337_-\|ACP-S-malonyltransferase	gnl\|CDD\|223408	COG0331, FabD, (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism].	1.549e-130

>NZ_LR594034.1|WP_138098812.1|1819685_1820375_-|DJ-1/PfpI-family-protein
MTTNLCFWLRRTKEEFHEKVACLIYPYFSLYEVTALTSTLVLSFGVDIDYIATSKDLIVSEDGLSCQATKTLEQISIDDYSCLILPGMIDFKPALRDKELLTFLAGLNEESILIAAISSAPILLAKAGLLKDKTFTGGIWQNFFDYFDFIPKENFKPLSVLKDQNIVTAIGFAHQEFARTVLTSLNLTEDANKFFREEATYAEEVLVFNLSEEEFENFKSDFDAHLISK
>NZ_LR594034.1|WP_003060169.1|1818315_1819452_-|molecular-chaperone-DnaJ
MNNTEYYDRLGVSKDASQDDIKKAYRKMSKKYHPDINKEAGAEQKYKDVQEAYETLSDSQKRAAYDQYGAAGANGGFGGGAGGFGGFDGGGFGGFEDIFSSFFGGGGMRNPNAPRQGDDLQYRVNLSFEEAVFGVEKEVSYNREATCGTCSGSGAKPGTSPVTCHKCHGSGVMTVDTQTPLGMMRRQVTCDVCHGTGQEIKEPCPTCHGTGHEKKVHKVSVKIPAGVETGQQIRLQGQGEAGFNGGPYGDLFVILNVLPSKKFERNGSTIYYSLDISFTQAALGDTVDIPTVHGDVEMAIPAGTQTGKTFRLKGKGAPKLRGGGQGDQHVTVNIVTPTKLNDAQKEALKAFAEASGEQPLHPKKKGFFDKVKDALEDI
>NZ_LR594034.1|WP_003052523.1|1817302_1818094_-|enoyl-CoA-hydratase
MPFNYIIFDIQDDLATLTLNRPEVSNGFNIPTCQEILQALTKVKENPSVRFLMIKAVGKVFSVGGDLVEMQTAVEKDDVQSLVKIAELVQEISFAIKQLPKPVILCADGAVAGAAFNIALAADFCIASTQTKFIQAFVNVGLAPDAGGLFLLTRAVGLNRATYLVMTGEGVTAEKGLDYGFVYRAAESDKLDKVCLQLLKRLRRGSSNSYAGMKTLVWQSFFTGWEEYAKKELDIQEELAFKEDFKEGVRAYGERRRPNFQGK
>NZ_LR594034.1|WP_003052521.1|1816791_1817226_-|MarR-family-transcriptional-regulator
MEYDKINQYLVDIFNRILVIEEMSLKTSQFSDVSLKEMHTIEIIGKYDQVTPSDIARELMVTLGTVTTSLNKLEAKGYIERTRSSSDRRVVYLSLTKKGRLLDRLHAKFHKNMVGHVIADMSDEEMQALMRGLGNLHQFLEDLV
>NZ_LR594034.1|WP_138084018.1|1815816_1816791_-|ketoacyl-ACP-synthase-III
MVFSKISQVAHYAPKQLVTNDDLANIMDTSHEWIFSRTGIAQRHIVREELTSDLASRVAEQLLTKSGLAADAIDFIIVATISPDGTMPSTAAIVQATIGATRAFAFDLTAACSGFVFALTMADKLISSGSYQKGMVIGAETLSKLIDWKDRTTAVLFGDGAGGVLLEASQDQHLLVESLHTDGARGQHLTSGQTGLSSPFSLSQEVTHTIQMDGRAIFDFAIRDVSKNISGILEQSGLTNDDLDYLLLHQANRRILDKMARKIDFPREKFLENMEHYGNTSAASIPILLSEAVQNGQIRLDGTQKVLLSGFGGGLTWGSLIVKI
>NZ_LR594034.1|WP_003045024.1|1815531_1815756_-|acyl-carrier-protein
MAVFEKVQEIIVEELGKETEEVTLETTFDDLDADSLDVFQVISEIEDAFDIQIETEEGLNTVGDLVAYVEEKTK
>NZ_LR594034.1|WP_003056654.1|1814361_1815333_-|enoyl-[acyl-carrier-protein]-reductase-FabK
MKTHITELLNIDYPIFQGGMAWVADGDLAGAVSNAGGLGIIGGGNAPKEVVKANIDRVKAITDKPFGVNIMLLSPFADDIVDLVIEEGVKVVTTGAGNPGKYMERLHQAGIIVIPVVPSVALAKRMEKLGVDAVIAEGMEAGGHIGKLTTMTLVRQVVEAVSIPVIAAGGIADGRGAAAAFMLGAEAVQVGTRFVVAKESNAHQNFKDKILKAKDIDTVISAQVVGHPVRSIKNKLTSAYAKAEKEFLTNQKTADDIEEMGAGSLRNAVVDGDVVNGSVMAGQIAGLVKEEESCEAILKDIYYGAASVIQEESKRWQAVSLDN
>NZ_LR594034.1|WP_138098724.1|1813416_1814337_-|ACP-S-malonyltransferase
MTKTAFLFAGQGAQKLGMARDFYDHFAIVRETFDQASQVLGYDLRRLIDSDQEKLNQTSYTQPAILTSSIAIYRVLGLHHIKPDMVAGLSLGEYSALVASGALSFEDTLALVAKRGRLMEEAAPSGSGKMVAVMNTDVQIIEEACQLAAVHGVVSPANYNTPSQIVIGGQAEAVNVAVELLKEKGVKRLIPLNVSGPFHTALLKPASRLLARELEHYTFNDFNIPLVGNTEASIMEKDRIPELLARQVMEPVRFYDSIATLTENGVTQAIEIGPGKFLTGFVKKINKQLPCSSIEDMVSLRSFLDR
>NZ_LR594034.1|WP_003052513.1|1812670_1813405_-|3-oxoacyl-[acyl-carrier-protein]-reductase
MEIKGKNIFITGSTRGIGLAMAHQFASLGANIVLNGRSAISDDLVASFADYGVTVVAISGDVSEASDAKRMVSEAIEHLGSVDVLVNNAGITNDKLMLKMTEEDFERVLKINLTGAFNMTQAVLKPMSKARQGAIINVSSVVGLTGNIGQANYAASKAGLIGFTKSVAREVAARNVRVNAIAPGFIESDMTDVLSEKMQEQILGQIPMKRIGKAQEVAQLASFLAGQDYITGQVIAIDGGMTMQ
>NZ_LR594034.1|WP_084916748.1|1811423_1812656_-|beta-ketoacyl-ACP-synthase-II
MTFKRVVVTGYGLTSPIGHDPETFWNNLKTGQIGIGPITKFDTTDYAVKNAAEIQDFPFDKYFVKKDLNRFDMYSLYALYAAMEAVEHANLDIDSIDADRFGVIVASGIGGIQEIEEQVIRLHEKGPKRVKPMTLPKALPNMAAGNVAMKLKAQGVCKSINTACASSNDAIGDAFRAIKFGTQDVMMVGGSEAAITKFAIAGFQSLTALSTTEDPSRSSIPFDKDRNGFIMGEGSGMLVLESLEHAQERGATILAEIVGYGNTCDAYHMTSPHPEGLGARKAIHLALQEAGIEASDINYVNAHGTSTPANEKGESQAIVAVIGKDVPVSSTKSFTGHLLGAAGAVEAIATIEAMRHHYVPMTAGTQALSEDIEANVIFGEGKEAAINYAISNTFGFGGHNAVLAFKRWED
>NZ_LR594034.1|WP_046177774.1|1820593_1822420_-|molecular-chaperone-DnaK
MSKIIGIDLGTTNSAVAVLEGTESKIIANPEGNRTTPSVVSFKNGEIIVGDAAKRQAVTNPETIISIKSKMGTSEKVAANGKEYTPQEISAMILQYLKGYAEDYLGEKVTKAVITVPAYFNDAQRQATKDAGKIAGLEVERIVNEPTAAALAYGLDKTDKEEKILVFDLGGGTFDVSILELGDGVFDVLATAGDNKLGGDDFDQKIIDFLVEEFKKENGIDLSQDKMALQRLKDAAEKAKKDLSGVTQTQISLPFITAGAAGPLHLEMSLSRAKFDDLTRDLVERTKTPVRQALSDAGLSLSEIDEVILVGGSTRIPAVVEAVKAETGKEPNKSVNPDEVVAMGAAIQGGVITGDVKDVVLLDVTPLSLGIETMGGVFTKLIDRNTTIPTSKSQVFSTAADNQPAVDIHVLQGERPMAADNKTLGRFQLTDIPAAPRGIPQIEVTFDIDKNGIVSVKAKDLGTQKEQHIVIKSNDGLSEEEIDRMMKDAEANAEADAKRKEEVDLKNEVDQAIFATEKTIKETEGKGFDTERDAAQSALDELKAAQESGNLDDMKAKLDALNEKAQALAVKMYEQAAAAQQAAQGAEGAQTSDSSNDDGVVDGEFTEK
>NZ_LR594034.1|WP_003052530.1|1822537_1823080_-|nucleotide-exchange-factor-GrpE
MSKKAKEEQVKEESLDQTVEVEEVSTEEVVEETPEKTDLELANERAEEFENKYLRAHAEMQNIQRRANEERQNLQRYRSQDLAKKILPSLDNLERALAVEGLTDDVKKGLEMVQESLVQALKEEGIEEVAVESFDHNLHMAVQTLPADDEHPADSIAQVFQKGYKLHERLLRPAMVVVYN
>NZ_LR594034.1|WP_003053834.1|1823121_1824156_-|heat-inducible-transcriptional-repressor-HrcA
MITERQNDILNLIVELFTQTHEPVGSKALQSAIDSSSATIRNDMAKLERLGLLEKAHTSSGRMPSAAGFKYFVEHSLSLDSIDEQDVYQLVKAFDFEAFRLEDLLAKASQILADITGYTAVILDVEPARQKLTAFDIVQLSNHDALAVLTLDESKPITVQFAIPKNFLSKDLLVLKEIVDERLLGRDVMDVHYKLRTEIPQIVQKYFTVTDNVLDLFDYIFEGLFQETVFVSGKVAALDYAGLATYQFLDHEQRLALSIRQSMAEDDMAMVRVADSKEAALANVTLLTYKFLIPYRGFGLLSLIGPIDMDYRRSVSLINVIGRILAVKLRDYYRYLNSNHYEVN
>NZ_LR594034.1|WP_003059834.1|1824290_1824860_-|glucosaminidase-domain-containing-protein
MRSRLKFPYFITLLLFFLVLIIGPLLFNGRMASATKEVNVGYSQDQFIKTLVPEVKPLAEHYGIRPSILIGQILLETDNGRTLLAAKYHNLFSKEADLGQSGIRLKDSLKSGQVFRYAVYKDRESSIRDYLSMLSQGQQIDKRLYRSLATEKGYKAPAQSLQDYRYSEDTTYAKRLIKVIEEKDLTSYD
>NZ_LR594034.1|WP_003053883.1|1824856_1825600_-|D-alanyl-D-alanine-carboxypeptidase-family-protein
MKHNHFKLLLQTLVVLLFVGGIYLFIKPEKQATKTPSSQQASSQKVVKNSKESTGLPKVSPKDWELILVNRDHITEELSPELVDVNGVSVDKRIEQATADFLAAAQAIDPQEHLISGYRSVAYQAELYQSYIDQEMANDPSLTQEAAEALVQTYSQPAGASEHQTGLAIDMSTVDSLNASDPQVAQAVQKIAPEYGFVLRFPDGKTKSTGVGYEDWHYRYVGKASARYMTKHRLTLEEYISALKEKQ
>NZ_LR594034.1|WP_003061134.1|1825589_1826297_-|histidine-phosphatase-family-protein
MTKTRLYIARHGKTMFNTIGRAQGWSDTPLTKKGEEGIRELGLGLKDSGIPFKAAFSSDSGRTMQTMEIILRESENEFLPYTRDKRIREWCFGSLDGAYDSELFLGVLPRTKAFENRDNLRDVPYSELAESIVEVDTANWAEPWEVLRKRIWDGFEAIALSIQNAGGGNALVVSHGMTIGTFMWLIDPDREKQYIDNGSVTVVEFEDGQFTIKTIGDMSYRYRGREIIEAKSDEA
>NZ_LR594034.1|WP_003052537.1|1826602_1826839_-|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein
MIWSLIVGAFIGMIAGKITEKSQSMGCFTNIAAGLIGSAVGQRLFGDWGIQLAGMAVFPSILGAAIVIALVSAIFGKR
>NZ_LR594034.1|WP_138098814.1|1826909_1827851_-|EamA-family-transporter
MSKTVKGSLMVLLAGLAWGISGAFGQYLMAHGTDVHLLTSLRLMISGVVLTALVLWRHKEKVIALVTTKKHFKELLIYSLLGLGLNQYAYLMAIRYSNAGTATVLQYLSPILVLIFVSATAKRLPTITESLAILLAILGTVIMACHGELSHLAIRPIGLFWGVFSALTYAYCVIKPVNMIKTWGSLIVIGLAMLMGGVVFPIVTRAWRYPLMLTVGNLVALIGIIGIGTIFAYTFFLKGASLIGPVKATLLASIEPVASVFFAIVLMKELFYVIDLLGMALILVAVLLISFRDLLLYQKERRLLKAVKRQKRF
>NZ_LR594034.1|WP_003052542.1|1828074_1829514_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB
MNFETIIGLEVHVELNTNSKIFSPSSAHFGEDPNANTNVIDWSFPGVLPVMNKGVIDAGIKAALALNMDIHKEMHFDRKNYFYPDNPKAYQISQFDEPIGYNGWIEIKLEDGSTKKIRIERAHLEEDAGKNTHGTDGYSYVDLNRQGVPLIEIVSEADMRSPEEAYAYLTALKEIIQYTGISDVKMEEGSMRVDANISLRPYGQEQFGTKTELKNLNSFSNVRKGLEFEVERQAKLLRSGGVIRQETRRYDEANKGTILMRVKEGAADYRYFPEPDLPLYEIDDAWIDEMRAQLPQFPAQRRAKYEEELGLSAYDASQLTATKALSDFFETAVSLGGDAKQVSNWLQGEVAQFLNAEGKTIEEIALTPENLVEMIAIIADGTISSKMAKKVFVHLAKNGGSARAYVEKAGLVQISDPAVLVPIIHQVFADNEAAVADFKSGKRNADKAFTGFLMKATKGQANPQVAQQLLAQELQKLLD
>NZ_LR594034.1|WP_065355367.1|1829513_1830980_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA
MSFNHKTIEELHDLLVAKEISATELTQKTLEDIKSREEAVGSFITVSEEAALKQAAAIDAKGIDADNLMSGIPLAVKDNISTKGILTTAASKMLYNYEPIFDATSVANAYAKDMIVIGKTNMDEFAMGGSTETSYFKKTKNAWDHTKVPGGSSGGSATAVASGQVRLSLGSDTGGSIRQPAAFNGVVGLKPTYGTVSRYGLIAFGSSLDQIGPFAPTVKENAQLLNVIASSDVKDATSAPVRIADYTSKIGRDIKGMKIALPKEYLGEGIDPEIKETVLAAVKQFEALGATVEEVSLPHSKYGVAVYYIIASSEASSNLQRFDGIRYGFRADDAKNLDEIYVNTRSQGFGDEVKRRIMLGTFSLSSGYYDAYFKKAGQVRTLIIQDFDKVFADYDLILGPTTPTVAFGLDTLNHDPVAMYLADLLTIPVNLAGLPGISIPAGFVDGLPVGLQLIGPKYAEETIYQAAAAFEAVTDYHKQQPIIFGGDK

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_LR594034_1	1.2\|1219378\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219378-1219407	30	MK448798	Streptococcus phage Javan533, complete genome	35767-35796	0	1.0
NZ_LR594034_1	1.2\|1219378\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219378-1219407	30	NC_028700	Streptococcus phage T12, complete genome	35622-35651	0	1.0
NZ_LR594034_1	1.2\|1219378\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219378-1219407	30	MK448790	Streptococcus phage Javan515, complete genome	35537-35566	0	1.0
NZ_LR594034_1	1.2\|1219378\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219378-1219407	30	MK448672	Streptococcus phage Javan117, complete genome	36171-36200	0	1.0
NZ_LR594034_1	1.2\|1219378\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219378-1219407	30	MK448783	Streptococcus phage Javan503, complete genome	34683-34712	0	1.0
NZ_LR594034_1	1.2\|1219378\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219378-1219407	30	MK448967	Streptococcus phage Javan510, complete genome	35768-35797	0	1.0
NZ_LR594034_1	1.2\|1219378\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219378-1219407	30	NC_004588	Streptococcus prophage 315.5, complete genome	35917-35946	0	1.0
NZ_LR594034_1	1.3\|1219444\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219444-1219473	30	MK448798	Streptococcus phage Javan533, complete genome	35767-35796	0	1.0
NZ_LR594034_1	1.3\|1219444\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219444-1219473	30	NC_028700	Streptococcus phage T12, complete genome	35622-35651	0	1.0
NZ_LR594034_1	1.3\|1219444\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219444-1219473	30	MK448790	Streptococcus phage Javan515, complete genome	35537-35566	0	1.0
NZ_LR594034_1	1.3\|1219444\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219444-1219473	30	MK448672	Streptococcus phage Javan117, complete genome	36171-36200	0	1.0
NZ_LR594034_1	1.3\|1219444\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219444-1219473	30	MK448783	Streptococcus phage Javan503, complete genome	34683-34712	0	1.0
NZ_LR594034_1	1.3\|1219444\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219444-1219473	30	MK448967	Streptococcus phage Javan510, complete genome	35768-35797	0	1.0
NZ_LR594034_1	1.3\|1219444\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219444-1219473	30	NC_004588	Streptococcus prophage 315.5, complete genome	35917-35946	0	1.0
NZ_LR594034_1	1.4\|1219510\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219510-1219539	30	MK448769	Streptococcus phage Javan471, complete genome	27872-27901	0	1.0
NZ_LR594034_1	1.4\|1219510\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219510-1219539	30	MK448684	Streptococcus phage Javan151, complete genome	27872-27901	0	1.0
NZ_LR594034_1	1.5\|1219576\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219576-1219605	30	MK448729	Streptococcus phage Javan31, complete genome	9536-9565	0	1.0
NZ_LR594034_1	1.5\|1219576\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219576-1219605	30	MK448691	Streptococcus phage Javan17, complete genome	9536-9565	0	1.0
NZ_LR594034_1	1.5\|1219576\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219576-1219605	30	MK448948	Streptococcus phage Javan46, complete genome	9536-9565	0	1.0
NZ_LR594034_1	1.5\|1219576\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219576-1219605	30	MK448768	Streptococcus phage Javan47, complete genome	10681-10710	0	1.0
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448742	Streptococcus phage Javan37, complete genome	1558-1587	0	1.0
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448957	Streptococcus phage Javan484, complete genome	1185-1214	0	1.0
NZ_LR594034_1	1.8\|1219774\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219774-1219803	30	MK448795	Streptococcus phage Javan527, complete genome	15598-15627	0	1.0
NZ_LR594034_1	1.8\|1219774\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219774-1219803	30	NC_028700	Streptococcus phage T12, complete genome	9872-9901	0	1.0
NZ_LR594034_1	1.8\|1219774\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219774-1219803	30	MK448790	Streptococcus phage Javan515, complete genome	10328-10357	0	1.0
NZ_LR594034_1	1.8\|1219774\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219774-1219803	30	MK448793	Streptococcus phage Javan523, complete genome	10196-10225	0	1.0
NZ_LR594034_1	1.8\|1219774\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219774-1219803	30	MK448954	Streptococcus phage Javan476, complete genome	9996-10025	0	1.0
NZ_LR594034_1	1.8\|1219774\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219774-1219803	30	MK448950	Streptococcus phage Javan464, complete genome	9918-9947	0	1.0
NZ_LR594034_1	1.2\|1219378\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219378-1219407	30	MK448849	Streptococcus phage Javan128, complete genome	35591-35620	1	0.967
NZ_LR594034_1	1.2\|1219378\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219378-1219407	30	MK448856	Streptococcus phage Javan158, complete genome	14720-14749	1	0.967
NZ_LR594034_1	1.3\|1219444\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219444-1219473	30	MK448849	Streptococcus phage Javan128, complete genome	35591-35620	1	0.967
NZ_LR594034_1	1.3\|1219444\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219444-1219473	30	MK448856	Streptococcus phage Javan158, complete genome	14720-14749	1	0.967
NZ_LR594034_1	1.5\|1219576\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219576-1219605	30	MK448965	Streptococcus phage Javan506, complete genome	8696-8725	1	0.967
NZ_LR594034_1	1.5\|1219576\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219576-1219605	30	MK448859	Streptococcus phage Javan170, complete genome	9174-9203	1	0.967
NZ_LR594034_1	1.5\|1219576\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219576-1219605	30	MK448959	Streptococcus phage Javan488, complete genome	8696-8725	1	0.967
NZ_LR594034_1	1.5\|1219576\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219576-1219605	30	MK448686	Streptococcus phage Javan157, complete genome	8748-8777	1	0.967
NZ_LR594034_1	1.5\|1219576\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219576-1219605	30	MK448949	Streptococcus phage Javan460, complete genome	8696-8725	1	0.967
NZ_LR594034_1	1.5\|1219576\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219576-1219605	30	MK448951	Streptococcus phage Javan470, complete genome	8748-8777	1	0.967
NZ_LR594034_1	1.5\|1219576\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219576-1219605	30	MK448676	Streptococcus phage Javan131, complete genome	10214-10243	1	0.967
NZ_LR594034_1	1.5\|1219576\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219576-1219605	30	MK448688	Streptococcus phage Javan161, complete genome	9173-9202	1	0.967
NZ_LR594034_1	1.8\|1219774\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219774-1219803	30	MK448960	Streptococcus phage Javan492, complete genome	9914-9943	1	0.967
NZ_LR594034_1	1.8\|1219774\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219774-1219803	30	MK448762	Streptococcus phage Javan447, complete genome	10041-10070	1	0.967
NZ_LR594034_1	1.1\|1219312\|30\|NZ_LR594034\|CRISPRCasFinder,CRT	1219312-1219341	30	MK448798	Streptococcus phage Javan533, complete genome	29736-29765	2	0.933
NZ_LR594034_1	1.1\|1219312\|30\|NZ_LR594034\|CRISPRCasFinder,CRT	1219312-1219341	30	NC_028700	Streptococcus phage T12, complete genome	29589-29618	2	0.933
NZ_LR594034_1	1.1\|1219312\|30\|NZ_LR594034\|CRISPRCasFinder,CRT	1219312-1219341	30	MK448790	Streptococcus phage Javan515, complete genome	29505-29534	2	0.933
NZ_LR594034_1	1.1\|1219312\|30\|NZ_LR594034\|CRISPRCasFinder,CRT	1219312-1219341	30	MK448783	Streptococcus phage Javan503, complete genome	28642-28671	2	0.933
NZ_LR594034_1	1.1\|1219312\|30\|NZ_LR594034\|CRISPRCasFinder,CRT	1219312-1219341	30	MK448967	Streptococcus phage Javan510, complete genome	29737-29766	2	0.933
NZ_LR594034_1	1.1\|1219312\|30\|NZ_LR594034\|CRISPRCasFinder,CRT	1219312-1219341	30	MK448856	Streptococcus phage Javan158, complete genome	8171-8200	2	0.933
NZ_LR594034_1	1.1\|1219312\|30\|NZ_LR594034\|CRISPRCasFinder,CRT	1219312-1219341	30	MK448683	Streptococcus phage Javan149, complete genome	32141-32170	2	0.933
NZ_LR594034_1	1.1\|1219312\|30\|NZ_LR594034\|CRISPRCasFinder,CRT	1219312-1219341	30	NC_004588	Streptococcus prophage 315.5, complete genome	29886-29915	2	0.933
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448736	Streptococcus phage Javan35, complete genome	1183-1212	2	0.933
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448781	Streptococcus phage Javan5, complete genome	1183-1212	2	0.933
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448795	Streptococcus phage Javan527, complete genome	1237-1266	2	0.933
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448938	Streptococcus phage Javan44, complete genome	1183-1212	2	0.933
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448672	Streptococcus phage Javan117, complete genome	1513-1542	2	0.933
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448849	Streptococcus phage Javan128, complete genome	1513-1542	2	0.933
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448911	Streptococcus phage Javan34, complete genome	1183-1212	2	0.933
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448916	Streptococcus phage Javan36, complete genome	1183-1212	2	0.933
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448791	Streptococcus phage Javan517, complete genome	1254-1283	2	0.933
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	NC_004587	Streptococcus prophage 315.4, complete genome	1349-1378	2	0.933
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	NC_003157	Streptococcus pyogenes strain NIH1 putative methionine sulfoxide reductase gene, complete cds; and integrated temperate phage PhiNIH1.1, complete genome	2619-2648	2	0.933
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448977	Streptococcus phage Javan530, complete genome	1254-1283	2	0.933
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448958	Streptococcus phage Javan486, complete genome	1254-1283	2	0.933
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448788	Streptococcus phage Javan511, complete genome	1254-1283	2	0.933
NZ_LR594034_2	2.1\|1487917\|48\|NZ_LR594034\|CRISPRCasFinder	1487917-1487964	48	MK448994	Streptococcus phage Javan618, complete genome	4435-4482	2	0.958
NZ_LR594034_2	2.1\|1487917\|48\|NZ_LR594034\|CRISPRCasFinder	1487917-1487964	48	MK448846	Streptococcus phage Javan122, complete genome	4582-4629	2	0.958
NZ_LR594034_1	1.2\|1219378\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219378-1219407	30	MK448681	Streptococcus phage Javan141, complete genome	35654-35683	3	0.9
NZ_LR594034_1	1.3\|1219444\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219444-1219473	30	MK448681	Streptococcus phage Javan141, complete genome	35654-35683	3	0.9
NZ_LR594034_1	1.5\|1219576\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219576-1219605	30	NC_006557	Bacillus phage BCJA1c, complete genome	9638-9667	3	0.9
NZ_LR594034_1	1.5\|1219576\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219576-1219605	30	AY616446	Bacillus clarkii bacteriophage BCJA1c, complete genome	9638-9667	3	0.9
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MH853356	Streptococcus phage LF2, partial genome	19627-19656	3	0.9
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448852	Streptococcus phage Javan140, complete genome	1176-1205	3	0.9
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448956	Streptococcus phage Javan48, complete genome	1183-1212	3	0.9
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448749	Streptococcus phage Javan39, complete genome	1183-1212	3	0.9
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448871	Streptococcus phage Javan196, complete genome	1242-1271	3	0.9
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448701	Streptococcus phage Javan197, complete genome	1191-1220	3	0.9
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448842	Streptococcus phage Javan110, complete genome	1172-1201	3	0.9
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448976	Streptococcus phage Javan528, complete genome	1242-1271	3	0.9
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448681	Streptococcus phage Javan141, complete genome	1318-1347	3	0.9
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448961	Streptococcus phage Javan494, complete genome	1242-1271	3	0.9
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448697	Streptococcus phage Javan185, complete genome	1242-1271	3	0.9
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448693	Streptococcus phage Javan177, complete genome	1242-1271	3	0.9
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448855	Streptococcus phage Javan150, complete genome	1206-1235	3	0.9
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448869	Streptococcus phage Javan190, complete genome	1191-1220	3	0.9
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448696	Streptococcus phage Javan183, complete genome	1242-1271	3	0.9
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448830	Streptococcus phage Javan73, complete genome	1171-1200	3	0.9
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448868	Streptococcus phage Javan188, complete genome	1242-1271	3	0.9
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448866	Streptococcus phage Javan184, complete genome	1242-1271	3	0.9
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448870	Streptococcus phage Javan192, complete genome	1191-1220	3	0.9
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448699	Streptococcus phage Javan189, complete genome	1242-1271	3	0.9
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448867	Streptococcus phage Javan186, complete genome	1242-1271	3	0.9
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448971	Streptococcus phage Javan52, complete genome	1170-1199	3	0.9
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448767	Streptococcus phage Javan467, complete genome	1244-1273	3	0.9
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448771	Streptococcus phage Javan481, complete genome	1244-1273	3	0.9
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448942	Streptococcus phage Javan448, complete genome	1244-1273	3	0.9
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	NC_004586	Streptococcus pyogenes phage 315.3, complete genome	1349-1378	3	0.9
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448964	Streptococcus phage Javan502, complete genome	1244-1273	3	0.9
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448943	Streptococcus phage Javan450, complete genome	1244-1273	3	0.9
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448972	Streptococcus phage Javan520, complete genome	1244-1273	3	0.9
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448786	Streptococcus phage Javan509, complete genome	1244-1273	3	0.9
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448774	Streptococcus phage Javan487, complete genome	1244-1273	3	0.9
NZ_LR594034_2	2.2\|1487990\|52\|NZ_LR594034\|CRISPRCasFinder	1487990-1488041	52	MK448811	Streptococcus phage Javan575, complete genome	4360-4411	3	0.942
NZ_LR594034_2	2.2\|1487990\|52\|NZ_LR594034\|CRISPRCasFinder	1487990-1488041	52	MN270258	Streptococcus phage phi-SgaBSJ27_rum, complete genome	12686-12737	3	0.942
NZ_LR594034_2	2.2\|1487990\|52\|NZ_LR594034\|CRISPRCasFinder	1487990-1488041	52	MN270259	Streptococcus phage phi-SgaBSJ31_rum, complete genome	12722-12773	3	0.942
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448784	Streptococcus phage Javan505, complete genome	1176-1205	4	0.867
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448952	Streptococcus phage Javan472, complete genome	1250-1279	4	0.867
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448947	Streptococcus phage Javan458, complete genome	1176-1205	4	0.867
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448790	Streptococcus phage Javan515, complete genome	1189-1218	4	0.867
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448689	Streptococcus phage Javan163, complete genome	1176-1205	4	0.867
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448974	Streptococcus phage Javan524, complete genome	1176-1205	4	0.867
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448789	Streptococcus phage Javan513, complete genome	1176-1205	4	0.867
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448698	Streptococcus phage Javan187, complete genome	1246-1275	4	0.867
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448818	Streptococcus phage Javan597, complete genome	1163-1192	4	0.867
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448796	Streptococcus phage Javan53, complete genome	1254-1283	4	0.867
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448685	Streptococcus phage Javan155, complete genome	1192-1221	4	0.867
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MH853357	Streptococcus phage LF3, partial genome	20012-20041	4	0.867
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448731	Streptococcus phage Javan33, complete genome	1171-1200	4	0.867
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448932	Streptococcus phage Javan42, complete genome	1545-1574	4	0.867
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448669	Streptococcus phage Javan11, complete genome	1545-1574	4	0.867
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448853	Streptococcus phage Javan144, complete genome	1192-1221	4	0.867
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448690	Streptococcus phage Javan169, complete genome	1176-1205	4	0.867
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448678	Streptococcus phage Javan135, complete genome	1176-1205	4	0.867
NZ_LR594034_2	2.2\|1487990\|52\|NZ_LR594034\|CRISPRCasFinder	1487990-1488041	52	MK448828	Streptococcus phage Javan69, complete genome	4360-4411	4	0.923
NZ_LR594034_1	1.5\|1219576\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219576-1219605	30	MK449008	Streptococcus phage Javan84, complete genome	12579-12608	5	0.833
NZ_LR594034_1	1.5\|1219576\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219576-1219605	30	MK448832	Streptococcus phage Javan85, complete genome	12579-12608	5	0.833
NZ_LR594034_1	1.5\|1219576\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219576-1219605	30	MF417888	Uncultured Caudovirales phage clone 9S_3, partial genome	10168-10197	5	0.833
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	AJ400629	Streptococcus pneumoniae bacteriophage MM1 attachment site attP	414-443	5	0.833
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448675	Streptococcus phage Javan129, complete genome	1187-1216	5	0.833
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448685	Streptococcus phage Javan155, complete genome	2151-2180	5	0.833
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448829	Streptococcus phage Javan7, complete genome	1242-1271	5	0.833
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448860	Streptococcus phage Javan172, complete genome	1352-1381	5	0.833
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448889	Streptococcus phage Javan262, complete genome	1204-1233	5	0.833
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448792	Streptococcus phage Javan521, complete genome	1352-1381	5	0.833
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448848	Streptococcus phage Javan126, complete genome	1352-1381	5	0.833
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448965	Streptococcus phage Javan506, complete genome	1516-1545	5	0.833
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448857	Streptococcus phage Javan164, complete genome	1352-1381	5	0.833
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MH853355	Streptococcus phage LF1, complete genome	29520-29549	5	0.833
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448677	Streptococcus phage Javan133, complete genome	1352-1381	5	0.833
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	NC_009018	Streptococcus phage phi3396, complete genome	1457-1486	5	0.833
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448679	Streptococcus phage Javan137, complete genome	1352-1381	5	0.833
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448959	Streptococcus phage Javan488, complete genome	1516-1545	5	0.833
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	NC_004584	Streptococcus prophage 315.1, complete genome	1457-1486	5	0.833
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448682	Streptococcus phage Javan143, complete genome	1245-1274	5	0.833
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448949	Streptococcus phage Javan460, complete genome	1516-1545	5	0.833
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448850	Streptococcus phage Javan132, complete genome	1187-1216	5	0.833
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448770	Streptococcus phage Javan477, complete genome	1352-1381	5	0.833
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448978	Streptococcus phage Javan532, complete genome	1352-1381	5	0.833
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MH853358	Streptococcus phage LF4, complete genome	29520-29549	5	0.833
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448845	Streptococcus phage Javan118, complete genome	1245-1274	5	0.833
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448785	Streptococcus phage Javan507, complete genome	1352-1381	5	0.833
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448853	Streptococcus phage Javan144, complete genome	2151-2180	5	0.833
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	DQ113772	Streptococcus pneumoniae bacteriophage MM1 1998, complete genome	1328-1357	5	0.833
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	AJ302074	Streptococcus pneumoniae bacteriophage MM1 complete genome	1328-1357	5	0.833
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448723	Streptococcus phage Javan271, complete genome	1180-1209	5	0.833
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	KC348600	Streptococcus phage phi5218, complete genome	11-40	5	0.833
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448884	Streptococcus phage Javan246, complete genome	1241-1270	5	0.833
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	EF116926	Streptococcus phage SMP, complete genome	10893-10922	5	0.833
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448798	Streptococcus phage Javan533, complete genome	1320-1349	5	0.833
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448967	Streptococcus phage Javan510, complete genome	1320-1349	5	0.833
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	NC_004588	Streptococcus prophage 315.5, complete genome	1469-1498	5	0.833
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	KT337367	Streptococcus phage phiARI0826b, partial genome	32384-32413	6	0.8
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	KT337369	Streptococcus phage phiARI0831b, partial genome	29438-29467	6	0.8
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448733	Streptococcus phage Javan345, complete genome	1183-1212	6	0.8
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	FR671407	Streptococcus phage 34117	36066-36095	6	0.8
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448647	Streptococcus satellite phage Javan759, complete genome	10284-10313	6	0.8
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448621	Streptococcus satellite phage Javan734, complete genome	4709-4738	6	0.8
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	NC_024361	Streptococcus phage DCC1738, complete sequence	36822-36851	6	0.8
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	KT337359	Streptococcus phage phiARI0468b-3, partial genome	30322-30351	6	0.8
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	NC_031929	Streptococcus phage phiARI0468-1, complete genome	39372-39401	6	0.8
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	NC_024357	Streptococcus phage K13, complete sequence	37790-37819	6	0.8
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	NC_031920	Streptococcus phage phiARI0004, complete genome	39414-39443	6	0.8
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	FR671406	Streptococcus phage 040922	38852-38881	6	0.8
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448445	Streptococcus satellite phage Javan344, complete genome	5143-5172	6	0.8
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	KY065451	Streptococcus phage IPP9, complete genome	1224-1253	6	0.8
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448718	Streptococcus phage Javan253, complete genome	1245-1274	6	0.8
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448715	Streptococcus phage Javan247, complete genome	1557-1586	6	0.8
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448673	Streptococcus phage Javan119, complete genome	1167-1196	6	0.8
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	KC348598	Streptococcus phage phi20c, complete genome	32157-32186	6	0.8
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448803	Streptococcus phage Javan551, complete genome	1240-1269	6	0.8
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448981	Streptococcus phage Javan548, complete genome	1240-1269	6	0.8
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448812	Streptococcus phage Javan577, complete genome	1193-1222	6	0.8
NZ_LR594034_1	1.1\|1219312\|30\|NZ_LR594034\|CRISPRCasFinder,CRT	1219312-1219341	30	NZ_CP042928	Bacillus cereus strain G1-1 plasmid unnamed, complete sequence	306711-306740	7	0.767
NZ_LR594034_1	1.1\|1219312\|30\|NZ_LR594034\|CRISPRCasFinder,CRT	1219312-1219341	30	NZ_CP040341	Bacillus cereus strain DLOU-Tangshan plasmid unnamed1, complete sequence	310967-310996	7	0.767
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448851	Streptococcus phage Javan14, complete genome	1238-1267	7	0.767
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448621	Streptococcus satellite phage Javan734, complete genome	9113-9142	7	0.767
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	KT337345	Streptococcus phage phiARI0285-1, partial genome	31834-31863	7	0.767
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	NC_024370	Streptococcus phage IC1, complete sequence	38367-38396	7	0.767
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	FR671411	Streptococcus phage 2167	34619-34648	7	0.767
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448862	Streptococcus phage Javan178, complete genome	1171-1200	7	0.767
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448986	Streptococcus phage Javan570, complete genome	1546-1575	7	0.767
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	KY065486	Streptococcus phage IPP46, complete genome	1570-1599	7	0.767
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448480	Streptococcus satellite phage Javan410, complete genome	10231-10260	7	0.767
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448618	Streptococcus satellite phage Javan731, complete genome	5250-5279	7	0.767
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448618	Streptococcus satellite phage Javan731, complete genome	9585-9614	7	0.767
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448433	Streptococcus satellite phage Javan328, complete genome	4250-4279	7	0.767
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448615	Streptococcus satellite phage Javan728, complete genome	7154-7183	7	0.767
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448607	Streptococcus satellite phage Javan720, complete genome	7312-7341	7	0.767
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448619	Streptococcus satellite phage Javan732, complete genome	6552-6581	7	0.767
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448608	Streptococcus satellite phage Javan721, complete genome	6344-6373	7	0.767
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448638	Streptococcus satellite phage Javan750, complete genome	9258-9287	7	0.767
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448639	Streptococcus satellite phage Javan751, complete genome	8150-8179	7	0.767
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448779	Streptococcus phage Javan497, complete genome	1245-1274	7	0.767
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448968	Streptococcus phage Javan512, complete genome	1245-1274	7	0.767
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448797	Streptococcus phage Javan531, complete genome	1245-1274	7	0.767
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448783	Streptococcus phage Javan503, complete genome	1241-1270	7	0.767
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	KY349816	Streptococcus phage Str01, complete genome	23485-23514	7	0.767
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	NC_004589	Streptococcus prophage 315.6, complete genome	1342-1371	7	0.767
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	NZ_CP035001	Rhizobium acidisoli strain FH23 plasmid pRapFH23c, complete sequence	392987-393016	7	0.767
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK044829	Streptococcus phage 109751, complete genome	1241-1270	7	0.767
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448763	Streptococcus phage Javan451, complete genome	1241-1270	7	0.767
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448464	Streptococcus satellite phage Javan387, complete genome	13933-13962	7	0.767
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	KY065488	Streptococcus phage IPP50, complete genome	1226-1255	7	0.767
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448475	Streptococcus satellite phage Javan403, complete genome	13939-13968	7	0.767
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	KY065467	Streptococcus phage IPP26, complete genome	1226-1255	7	0.767
NZ_LR594034_1	1.6\|1219642\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219642-1219671	30	MK448729	Streptococcus phage Javan31, complete genome	5622-5651	8	0.733
NZ_LR594034_1	1.6\|1219642\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219642-1219671	30	MK448691	Streptococcus phage Javan17, complete genome	5622-5651	8	0.733
NZ_LR594034_1	1.6\|1219642\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219642-1219671	30	MK448948	Streptococcus phage Javan46, complete genome	5622-5651	8	0.733
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448480	Streptococcus satellite phage Javan410, complete genome	13787-13816	8	0.733
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448859	Streptococcus phage Javan170, complete genome	1216-1245	8	0.733
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448676	Streptococcus phage Javan131, complete genome	1216-1245	8	0.733
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448688	Streptococcus phage Javan161, complete genome	1216-1245	8	0.733
NZ_LR594034_1	1.1\|1219312\|30\|NZ_LR594034\|CRISPRCasFinder,CRT	1219312-1219341	30	MT774401	CrAssphage cr6_1, complete genome	77493-77522	9	0.7
NZ_LR594034_1	1.5\|1219576\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219576-1219605	30	GU943073	Uncultured phage MedDCM-OCT-S08-C41 genomic sequence	20312-20341	10	0.667
NZ_LR594034_1	1.7\|1219708\|30\|NZ_LR594034\|CRISPRCasFinder,CRT,PILER-CR	1219708-1219737	30	MK448896	Streptococcus phage Javan278, complete genome	1167-1196	10	0.667

1. spacer 1.2|1219378|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448798 (Streptococcus phage Javan533, complete genome) position: , mismatch: 0, identity: 1.0

tccagtaattgtcacagtatactgattttg	CRISPR spacer
tccagtaattgtcacagtatactgattttg	Protospacer
******************************

2. spacer 1.2|1219378|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to NC_028700 (Streptococcus phage T12, complete genome) position: , mismatch: 0, identity: 1.0

tccagtaattgtcacagtatactgattttg	CRISPR spacer
tccagtaattgtcacagtatactgattttg	Protospacer
******************************

3. spacer 1.2|1219378|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448790 (Streptococcus phage Javan515, complete genome) position: , mismatch: 0, identity: 1.0

tccagtaattgtcacagtatactgattttg	CRISPR spacer
tccagtaattgtcacagtatactgattttg	Protospacer
******************************

4. spacer 1.2|1219378|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448672 (Streptococcus phage Javan117, complete genome) position: , mismatch: 0, identity: 1.0

tccagtaattgtcacagtatactgattttg	CRISPR spacer
tccagtaattgtcacagtatactgattttg	Protospacer
******************************

5. spacer 1.2|1219378|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448783 (Streptococcus phage Javan503, complete genome) position: , mismatch: 0, identity: 1.0

tccagtaattgtcacagtatactgattttg	CRISPR spacer
tccagtaattgtcacagtatactgattttg	Protospacer
******************************

6. spacer 1.2|1219378|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448967 (Streptococcus phage Javan510, complete genome) position: , mismatch: 0, identity: 1.0

tccagtaattgtcacagtatactgattttg	CRISPR spacer
tccagtaattgtcacagtatactgattttg	Protospacer
******************************

7. spacer 1.2|1219378|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to NC_004588 (Streptococcus prophage 315.5, complete genome) position: , mismatch: 0, identity: 1.0

tccagtaattgtcacagtatactgattttg	CRISPR spacer
tccagtaattgtcacagtatactgattttg	Protospacer
******************************

8. spacer 1.3|1219444|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448798 (Streptococcus phage Javan533, complete genome) position: , mismatch: 0, identity: 1.0

tccagtaattgtcacagtatactgattttg	CRISPR spacer
tccagtaattgtcacagtatactgattttg	Protospacer
******************************

9. spacer 1.3|1219444|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to NC_028700 (Streptococcus phage T12, complete genome) position: , mismatch: 0, identity: 1.0

tccagtaattgtcacagtatactgattttg	CRISPR spacer
tccagtaattgtcacagtatactgattttg	Protospacer
******************************

10. spacer 1.3|1219444|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448790 (Streptococcus phage Javan515, complete genome) position: , mismatch: 0, identity: 1.0

tccagtaattgtcacagtatactgattttg	CRISPR spacer
tccagtaattgtcacagtatactgattttg	Protospacer
******************************

11. spacer 1.3|1219444|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448672 (Streptococcus phage Javan117, complete genome) position: , mismatch: 0, identity: 1.0

tccagtaattgtcacagtatactgattttg	CRISPR spacer
tccagtaattgtcacagtatactgattttg	Protospacer
******************************

12. spacer 1.3|1219444|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448783 (Streptococcus phage Javan503, complete genome) position: , mismatch: 0, identity: 1.0

tccagtaattgtcacagtatactgattttg	CRISPR spacer
tccagtaattgtcacagtatactgattttg	Protospacer
******************************

13. spacer 1.3|1219444|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448967 (Streptococcus phage Javan510, complete genome) position: , mismatch: 0, identity: 1.0

tccagtaattgtcacagtatactgattttg	CRISPR spacer
tccagtaattgtcacagtatactgattttg	Protospacer
******************************

14. spacer 1.3|1219444|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to NC_004588 (Streptococcus prophage 315.5, complete genome) position: , mismatch: 0, identity: 1.0

tccagtaattgtcacagtatactgattttg	CRISPR spacer
tccagtaattgtcacagtatactgattttg	Protospacer
******************************

15. spacer 1.4|1219510|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448769 (Streptococcus phage Javan471, complete genome) position: , mismatch: 0, identity: 1.0

gtcttgactaaatctttcggcagttcgatt	CRISPR spacer
gtcttgactaaatctttcggcagttcgatt	Protospacer
******************************

16. spacer 1.4|1219510|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448684 (Streptococcus phage Javan151, complete genome) position: , mismatch: 0, identity: 1.0

gtcttgactaaatctttcggcagttcgatt	CRISPR spacer
gtcttgactaaatctttcggcagttcgatt	Protospacer
******************************

17. spacer 1.5|1219576|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448729 (Streptococcus phage Javan31, complete genome) position: , mismatch: 0, identity: 1.0

ttgacctctgctgctttgaatcctttttgg	CRISPR spacer
ttgacctctgctgctttgaatcctttttgg	Protospacer
******************************

18. spacer 1.5|1219576|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448691 (Streptococcus phage Javan17, complete genome) position: , mismatch: 0, identity: 1.0

ttgacctctgctgctttgaatcctttttgg	CRISPR spacer
ttgacctctgctgctttgaatcctttttgg	Protospacer
******************************

19. spacer 1.5|1219576|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448948 (Streptococcus phage Javan46, complete genome) position: , mismatch: 0, identity: 1.0

ttgacctctgctgctttgaatcctttttgg	CRISPR spacer
ttgacctctgctgctttgaatcctttttgg	Protospacer
******************************

20. spacer 1.5|1219576|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448768 (Streptococcus phage Javan47, complete genome) position: , mismatch: 0, identity: 1.0

ttgacctctgctgctttgaatcctttttgg	CRISPR spacer
ttgacctctgctgctttgaatcctttttgg	Protospacer
******************************

21. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448742 (Streptococcus phage Javan37, complete genome) position: , mismatch: 0, identity: 1.0

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aatttgagcgtggggctttttttatttgtc	Protospacer
******************************

22. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448957 (Streptococcus phage Javan484, complete genome) position: , mismatch: 0, identity: 1.0

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aatttgagcgtggggctttttttatttgtc	Protospacer
******************************

23. spacer 1.8|1219774|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448795 (Streptococcus phage Javan527, complete genome) position: , mismatch: 0, identity: 1.0

tcctcgtaagctccactccatctgctaaag	CRISPR spacer
tcctcgtaagctccactccatctgctaaag	Protospacer
******************************

24. spacer 1.8|1219774|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to NC_028700 (Streptococcus phage T12, complete genome) position: , mismatch: 0, identity: 1.0

tcctcgtaagctccactccatctgctaaag	CRISPR spacer
tcctcgtaagctccactccatctgctaaag	Protospacer
******************************

25. spacer 1.8|1219774|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448790 (Streptococcus phage Javan515, complete genome) position: , mismatch: 0, identity: 1.0

tcctcgtaagctccactccatctgctaaag	CRISPR spacer
tcctcgtaagctccactccatctgctaaag	Protospacer
******************************

26. spacer 1.8|1219774|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448793 (Streptococcus phage Javan523, complete genome) position: , mismatch: 0, identity: 1.0

tcctcgtaagctccactccatctgctaaag	CRISPR spacer
tcctcgtaagctccactccatctgctaaag	Protospacer
******************************

27. spacer 1.8|1219774|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448954 (Streptococcus phage Javan476, complete genome) position: , mismatch: 0, identity: 1.0

tcctcgtaagctccactccatctgctaaag	CRISPR spacer
tcctcgtaagctccactccatctgctaaag	Protospacer
******************************

28. spacer 1.8|1219774|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448950 (Streptococcus phage Javan464, complete genome) position: , mismatch: 0, identity: 1.0

tcctcgtaagctccactccatctgctaaag	CRISPR spacer
tcctcgtaagctccactccatctgctaaag	Protospacer
******************************

29. spacer 1.2|1219378|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448849 (Streptococcus phage Javan128, complete genome) position: , mismatch: 1, identity: 0.967

tccagtaattgtcacagtatactgattttg	CRISPR spacer
tccaataattgtcacagtatactgattttg	Protospacer
****.*************************

30. spacer 1.2|1219378|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448856 (Streptococcus phage Javan158, complete genome) position: , mismatch: 1, identity: 0.967

tccagtaattgtcacagtatactgattttg	CRISPR spacer
tccaataattgtcacagtatactgattttg	Protospacer
****.*************************

31. spacer 1.3|1219444|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448849 (Streptococcus phage Javan128, complete genome) position: , mismatch: 1, identity: 0.967

tccagtaattgtcacagtatactgattttg	CRISPR spacer
tccaataattgtcacagtatactgattttg	Protospacer
****.*************************

32. spacer 1.3|1219444|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448856 (Streptococcus phage Javan158, complete genome) position: , mismatch: 1, identity: 0.967

tccagtaattgtcacagtatactgattttg	CRISPR spacer
tccaataattgtcacagtatactgattttg	Protospacer
****.*************************

33. spacer 1.5|1219576|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448965 (Streptococcus phage Javan506, complete genome) position: , mismatch: 1, identity: 0.967

ttgacctctgctgctttgaatcctttttgg	CRISPR spacer
ttgacctctgctgctttaaatcctttttgg	Protospacer
*****************.************

34. spacer 1.5|1219576|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448859 (Streptococcus phage Javan170, complete genome) position: , mismatch: 1, identity: 0.967

ttgacctctgctgctttgaatcctttttgg	CRISPR spacer
ttgacttctgctgctttgaatcctttttgg	Protospacer
*****.************************

35. spacer 1.5|1219576|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448959 (Streptococcus phage Javan488, complete genome) position: , mismatch: 1, identity: 0.967

ttgacctctgctgctttgaatcctttttgg	CRISPR spacer
ttgacctctgctgctttaaatcctttttgg	Protospacer
*****************.************

36. spacer 1.5|1219576|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448686 (Streptococcus phage Javan157, complete genome) position: , mismatch: 1, identity: 0.967

ttgacctctgctgctttgaatcctttttgg	CRISPR spacer
ttgacttctgctgctttgaatcctttttgg	Protospacer
*****.************************

37. spacer 1.5|1219576|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448949 (Streptococcus phage Javan460, complete genome) position: , mismatch: 1, identity: 0.967

ttgacctctgctgctttgaatcctttttgg	CRISPR spacer
ttgacctctgctgctttaaatcctttttgg	Protospacer
*****************.************

38. spacer 1.5|1219576|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448951 (Streptococcus phage Javan470, complete genome) position: , mismatch: 1, identity: 0.967

ttgacctctgctgctttgaatcctttttgg	CRISPR spacer
ttgacttctgctgctttgaatcctttttgg	Protospacer
*****.************************

39. spacer 1.5|1219576|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448676 (Streptococcus phage Javan131, complete genome) position: , mismatch: 1, identity: 0.967

ttgacctctgctgctttgaatcctttttgg	CRISPR spacer
ttgacctctgctgctttaaatcctttttgg	Protospacer
*****************.************

40. spacer 1.5|1219576|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448688 (Streptococcus phage Javan161, complete genome) position: , mismatch: 1, identity: 0.967

ttgacctctgctgctttgaatcctttttgg	CRISPR spacer
ttgacttctgctgctttgaatcctttttgg	Protospacer
*****.************************

41. spacer 1.8|1219774|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448960 (Streptococcus phage Javan492, complete genome) position: , mismatch: 1, identity: 0.967

tcctcgtaagctccactccatctgctaaag	CRISPR spacer
tcctcgtaagctccactccatctgctgaag	Protospacer
**************************.***

42. spacer 1.8|1219774|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448762 (Streptococcus phage Javan447, complete genome) position: , mismatch: 1, identity: 0.967

tcctcgtaagctccactccatctgctaaag	CRISPR spacer
tcctcgtaagctccactccatctgctgaag	Protospacer
**************************.***

43. spacer 1.1|1219312|30|NZ_LR594034|CRISPRCasFinder,CRT matches to MK448798 (Streptococcus phage Javan533, complete genome) position: , mismatch: 2, identity: 0.933

agcgaattagtaaaagtaatctgtttactt	CRISPR spacer
agcgagttagtaaacgtaatctgtttactt	Protospacer
*****.******** ***************

44. spacer 1.1|1219312|30|NZ_LR594034|CRISPRCasFinder,CRT matches to NC_028700 (Streptococcus phage T12, complete genome) position: , mismatch: 2, identity: 0.933

agcgaattagtaaaagtaatctgtttactt	CRISPR spacer
agcgagttagtaaacgtaatctgtttactt	Protospacer
*****.******** ***************

45. spacer 1.1|1219312|30|NZ_LR594034|CRISPRCasFinder,CRT matches to MK448790 (Streptococcus phage Javan515, complete genome) position: , mismatch: 2, identity: 0.933

agcgaattagtaaaagtaatctgtttactt	CRISPR spacer
agcgagttagtaaacgtaatctgtttactt	Protospacer
*****.******** ***************

46. spacer 1.1|1219312|30|NZ_LR594034|CRISPRCasFinder,CRT matches to MK448783 (Streptococcus phage Javan503, complete genome) position: , mismatch: 2, identity: 0.933

agcgaattagtaaaagtaatctgtttactt	CRISPR spacer
agcgagttagtaaacgtaatctgtttactt	Protospacer
*****.******** ***************

47. spacer 1.1|1219312|30|NZ_LR594034|CRISPRCasFinder,CRT matches to MK448967 (Streptococcus phage Javan510, complete genome) position: , mismatch: 2, identity: 0.933

agcgaattagtaaaagtaatctgtttactt	CRISPR spacer
agcgagttagtaaacgtaatctgtttactt	Protospacer
*****.******** ***************

48. spacer 1.1|1219312|30|NZ_LR594034|CRISPRCasFinder,CRT matches to MK448856 (Streptococcus phage Javan158, complete genome) position: , mismatch: 2, identity: 0.933

agcgaattagtaaaagtaatctgtttactt	CRISPR spacer
agcgagttagtaaacgtaatctgtttactt	Protospacer
*****.******** ***************

49. spacer 1.1|1219312|30|NZ_LR594034|CRISPRCasFinder,CRT matches to MK448683 (Streptococcus phage Javan149, complete genome) position: , mismatch: 2, identity: 0.933

agcgaattagtaaaagtaatctgtttactt	CRISPR spacer
agcgagttagtaaacgtaatctgtttactt	Protospacer
*****.******** ***************

50. spacer 1.1|1219312|30|NZ_LR594034|CRISPRCasFinder,CRT matches to NC_004588 (Streptococcus prophage 315.5, complete genome) position: , mismatch: 2, identity: 0.933

agcgaattagtaaaagtaatctgtttactt	CRISPR spacer
agcgagttagtaaacgtaatctgtttactt	Protospacer
*****.******** ***************

51. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448736 (Streptococcus phage Javan35, complete genome) position: , mismatch: 2, identity: 0.933

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aatttgagcgtggggcttttttattttgtc	Protospacer
**********************  ******

52. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448781 (Streptococcus phage Javan5, complete genome) position: , mismatch: 2, identity: 0.933

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aatttgagcgtggggcttttttattttgtc	Protospacer
**********************  ******

53. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448795 (Streptococcus phage Javan527, complete genome) position: , mismatch: 2, identity: 0.933

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aagttgagcggggggctttttttatttgtc	Protospacer
** ******* *******************

54. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448938 (Streptococcus phage Javan44, complete genome) position: , mismatch: 2, identity: 0.933

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aatttgagcgtggggcttttttattttgtc	Protospacer
**********************  ******

55. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448672 (Streptococcus phage Javan117, complete genome) position: , mismatch: 2, identity: 0.933

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aatttgagcgtggggcttttttattttgtc	Protospacer
**********************  ******

56. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448849 (Streptococcus phage Javan128, complete genome) position: , mismatch: 2, identity: 0.933

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aatttgagcgtggggcttttttattttgtc	Protospacer
**********************  ******

57. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448911 (Streptococcus phage Javan34, complete genome) position: , mismatch: 2, identity: 0.933

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aatttgagcgtggggcttttttattttgtc	Protospacer
**********************  ******

58. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448916 (Streptococcus phage Javan36, complete genome) position: , mismatch: 2, identity: 0.933

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aatttgagcgtggggcttttttattttgtc	Protospacer
**********************  ******

59. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448791 (Streptococcus phage Javan517, complete genome) position: , mismatch: 2, identity: 0.933

aatttgagcgtggggctttttttatttgtc-	CRISPR spacer
aatttgagcgtggggc-ttttttatttatct	Protospacer
**************** **********.**

60. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to NC_004587 (Streptococcus prophage 315.4, complete genome) position: , mismatch: 2, identity: 0.933

aatttgagcgtggggctttttttatttgtc-	CRISPR spacer
aatttgagcgtggggc-ttttttatttatct	Protospacer
**************** **********.**

61. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to NC_003157 (Streptococcus pyogenes strain NIH1 putative methionine sulfoxide reductase gene, complete cds; and integrated temperate phage PhiNIH1.1, complete genome) position: , mismatch: 2, identity: 0.933

aatttgagcgtggggctttttttatttgtc-	CRISPR spacer
aatttgagcgtggggc-ttttttatttatct	Protospacer
**************** **********.**

62. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448977 (Streptococcus phage Javan530, complete genome) position: , mismatch: 2, identity: 0.933

aatttgagcgtggggctttttttatttgtc-	CRISPR spacer
aatttgagcgtggggc-ttttttatttatct	Protospacer
**************** **********.**

63. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448958 (Streptococcus phage Javan486, complete genome) position: , mismatch: 2, identity: 0.933

aatttgagcgtggggctttttttatttgtc-	CRISPR spacer
aatttgagcgtggggc-ttttttatttatct	Protospacer
**************** **********.**

64. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448788 (Streptococcus phage Javan511, complete genome) position: , mismatch: 2, identity: 0.933

aatttgagcgtggggctttttttatttgtc-	CRISPR spacer
aatttgagcgtggggc-ttttttatttatct	Protospacer
**************** **********.**

65. spacer 2.1|1487917|48|NZ_LR594034|CRISPRCasFinder matches to MK448994 (Streptococcus phage Javan618, complete genome) position: , mismatch: 2, identity: 0.958

tcttcctttatatagccagaggaagattattttcatgtataacaaatt	CRISPR spacer
tcttcctttatatagctagaggaagattattttcatgtataacaaata	Protospacer
****************.******************************

66. spacer 2.1|1487917|48|NZ_LR594034|CRISPRCasFinder matches to MK448846 (Streptococcus phage Javan122, complete genome) position: , mismatch: 2, identity: 0.958

tcttcctttatatagccagaggaagattattttcatgtataacaaatt	CRISPR spacer
tcttcctttatatagctagaggaagattattttcatgtataacaaata	Protospacer
****************.******************************

67. spacer 1.2|1219378|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448681 (Streptococcus phage Javan141, complete genome) position: , mismatch: 3, identity: 0.9

tccagtaattgtcacagtatactgattttg	CRISPR spacer
accaataattgtcacagtgtactgattttg	Protospacer
 ***.*************.***********

68. spacer 1.3|1219444|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448681 (Streptococcus phage Javan141, complete genome) position: , mismatch: 3, identity: 0.9

tccagtaattgtcacagtatactgattttg	CRISPR spacer
accaataattgtcacagtgtactgattttg	Protospacer
 ***.*************.***********

69. spacer 1.5|1219576|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to NC_006557 (Bacillus phage BCJA1c, complete genome) position: , mismatch: 3, identity: 0.9

ttgacctctgctgctttgaatcctttttgg	CRISPR spacer
ttaacctctgctgctttaaatccttttttg	Protospacer
**.**************.********** *

70. spacer 1.5|1219576|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to AY616446 (Bacillus clarkii bacteriophage BCJA1c, complete genome) position: , mismatch: 3, identity: 0.9

ttgacctctgctgctttgaatcctttttgg	CRISPR spacer
ttaacctctgctgctttaaatccttttttg	Protospacer
**.**************.********** *

71. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MH853356 (Streptococcus phage LF2, partial genome) position: , mismatch: 3, identity: 0.9

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aatttgagcgtggggctttttttatttcca	Protospacer
*************************** .

72. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448852 (Streptococcus phage Javan140, complete genome) position: , mismatch: 3, identity: 0.9

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aatttgagcgtggggctttttttatttaaa	Protospacer
***************************.

73. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448956 (Streptococcus phage Javan48, complete genome) position: , mismatch: 3, identity: 0.9

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aatttgagcgtggggctttttttatttcca	Protospacer
*************************** .

74. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448749 (Streptococcus phage Javan39, complete genome) position: , mismatch: 3, identity: 0.9

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aatttgagcgtggggctttttttatttcca	Protospacer
*************************** .

75. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448871 (Streptococcus phage Javan196, complete genome) position: , mismatch: 3, identity: 0.9

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aatttgagcgtagggctttttttattttac	Protospacer
***********.***************  *

76. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448701 (Streptococcus phage Javan197, complete genome) position: , mismatch: 3, identity: 0.9

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aatttgagcgtggggcttttattatttata	Protospacer
******************** ******.*

77. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448842 (Streptococcus phage Javan110, complete genome) position: , mismatch: 3, identity: 0.9

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aatttgagcgtagggctttttttatttatt	Protospacer
***********.***************.*.

78. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448976 (Streptococcus phage Javan528, complete genome) position: , mismatch: 3, identity: 0.9

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aatttgagcgtagggctttttttattttac	Protospacer
***********.***************  *

79. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448681 (Streptococcus phage Javan141, complete genome) position: , mismatch: 3, identity: 0.9

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aatttgagcgtggggctttttttagttttt	Protospacer
************************ ** *.

80. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448961 (Streptococcus phage Javan494, complete genome) position: , mismatch: 3, identity: 0.9

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aatttgagcgtagggctttttttattttac	Protospacer
***********.***************  *

81. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448697 (Streptococcus phage Javan185, complete genome) position: , mismatch: 3, identity: 0.9

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aatttgagcgtagggctttttttattttac	Protospacer
***********.***************  *

82. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448693 (Streptococcus phage Javan177, complete genome) position: , mismatch: 3, identity: 0.9

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aatttgagcgtagggctttttttattttac	Protospacer
***********.***************  *

83. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448855 (Streptococcus phage Javan150, complete genome) position: , mismatch: 3, identity: 0.9

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aatttgagcgtagggctttttttattttac	Protospacer
***********.***************  *

84. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448869 (Streptococcus phage Javan190, complete genome) position: , mismatch: 3, identity: 0.9

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aatttgagcgtggggcttttattatttata	Protospacer
******************** ******.*

85. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448696 (Streptococcus phage Javan183, complete genome) position: , mismatch: 3, identity: 0.9

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aatttgagcgtagggctttttttattttac	Protospacer
***********.***************  *

86. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448830 (Streptococcus phage Javan73, complete genome) position: , mismatch: 3, identity: 0.9

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aatttgagcgtagggctttttttatttatt	Protospacer
***********.***************.*.

87. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448868 (Streptococcus phage Javan188, complete genome) position: , mismatch: 3, identity: 0.9

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aatttgagcgtagggctttttttattttac	Protospacer
***********.***************  *

88. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448866 (Streptococcus phage Javan184, complete genome) position: , mismatch: 3, identity: 0.9

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aatttgagcgtagggctttttttattttac	Protospacer
***********.***************  *

89. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448870 (Streptococcus phage Javan192, complete genome) position: , mismatch: 3, identity: 0.9

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aatttgagcgtggggcttttattatttata	Protospacer
******************** ******.*

90. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448699 (Streptococcus phage Javan189, complete genome) position: , mismatch: 3, identity: 0.9

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aatttgagcgtagggctttttttattttac	Protospacer
***********.***************  *

91. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448867 (Streptococcus phage Javan186, complete genome) position: , mismatch: 3, identity: 0.9

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aatttgagcgtagggctttttttattttac	Protospacer
***********.***************  *

92. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448971 (Streptococcus phage Javan52, complete genome) position: , mismatch: 3, identity: 0.9

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aatttgagcgcggggctttttttattgttc	Protospacer
**********.***************  **

93. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448767 (Streptococcus phage Javan467, complete genome) position: , mismatch: 3, identity: 0.9

aatttgagcgtggggcttttt--ttatttgtc	CRISPR spacer
aatttgagcgtggggcttttttgttagttg--	Protospacer
*********************  *** ***

94. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448771 (Streptococcus phage Javan481, complete genome) position: , mismatch: 3, identity: 0.9

aatttgagcgtggggcttttt--ttatttgtc	CRISPR spacer
aatttgagcgtggggcttttttgttagttg--	Protospacer
*********************  *** ***

95. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448942 (Streptococcus phage Javan448, complete genome) position: , mismatch: 3, identity: 0.9

aatttgagcgtggggcttttt--ttatttgtc	CRISPR spacer
aatttgagcgtggggcttttttgttagttg--	Protospacer
*********************  *** ***

96. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to NC_004586 (Streptococcus pyogenes phage 315.3, complete genome) position: , mismatch: 3, identity: 0.9

aatttgagcgtggggcttttt--ttatttgtc	CRISPR spacer
aatttgagcgtggggcttttttgttagttg--	Protospacer
*********************  *** ***

97. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448964 (Streptococcus phage Javan502, complete genome) position: , mismatch: 3, identity: 0.9

aatttgagcgtggggcttttt--ttatttgtc	CRISPR spacer
aatttgagcgtggggcttttttgttagttg--	Protospacer
*********************  *** ***

98. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448943 (Streptococcus phage Javan450, complete genome) position: , mismatch: 3, identity: 0.9

aatttgagcgtggggcttttt--ttatttgtc	CRISPR spacer
aatttgagcgtggggcttttttgttagttg--	Protospacer
*********************  *** ***

99. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448972 (Streptococcus phage Javan520, complete genome) position: , mismatch: 3, identity: 0.9

aatttgagcgtggggcttttt--ttatttgtc	CRISPR spacer
aatttgagcgtggggcttttttgttagttg--	Protospacer
*********************  *** ***

100. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448786 (Streptococcus phage Javan509, complete genome) position: , mismatch: 3, identity: 0.9

aatttgagcgtggggcttttt--ttatttgtc	CRISPR spacer
aatttgagcgtggggcttttttgttagttg--	Protospacer
*********************  *** ***

101. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448774 (Streptococcus phage Javan487, complete genome) position: , mismatch: 3, identity: 0.9

aatttgagcgtggggcttttt--ttatttgtc	CRISPR spacer
aatttgagcgtggggcttttttgttagttg--	Protospacer
*********************  *** ***

102. spacer 2.2|1487990|52|NZ_LR594034|CRISPRCasFinder matches to MK448811 (Streptococcus phage Javan575, complete genome) position: , mismatch: 3, identity: 0.942

aaatttcaccccagtattacctatataggtgtaagggatg-aaaacaacgatt	CRISPR spacer
aaatttcaccccagtattacctatataggtgtaagagatgaaaaacatcgat-	Protospacer
***********************************.**** ****** ****

103. spacer 2.2|1487990|52|NZ_LR594034|CRISPRCasFinder matches to MN270258 (Streptococcus phage phi-SgaBSJ27_rum, complete genome) position: , mismatch: 3, identity: 0.942

aaatttcaccccagtattacctatataggtgtaagggatg-aaaacaacgatt	CRISPR spacer
aaatttcaccccagtattacctatataggtgtaagagatgaaaaacatcgat-	Protospacer
***********************************.**** ****** ****

104. spacer 2.2|1487990|52|NZ_LR594034|CRISPRCasFinder matches to MN270259 (Streptococcus phage phi-SgaBSJ31_rum, complete genome) position: , mismatch: 3, identity: 0.942

aaatttcaccccagtattacctatataggtgtaagggatg-aaaacaacgatt	CRISPR spacer
aaatttcaccccagtattacctatataggtgtaagagatgaaaaacatcgat-	Protospacer
***********************************.**** ****** ****

105. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448784 (Streptococcus phage Javan505, complete genome) position: , mismatch: 4, identity: 0.867

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aatttgagcgtggggttttttttatttaaa	Protospacer
***************.***********.

106. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448952 (Streptococcus phage Javan472, complete genome) position: , mismatch: 4, identity: 0.867

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aatttgatcgtggggctttttttatttaaa	Protospacer
******* *******************.

107. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448947 (Streptococcus phage Javan458, complete genome) position: , mismatch: 4, identity: 0.867

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aatttgagcgtggggttttttttatttaaa	Protospacer
***************.***********.

108. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448790 (Streptococcus phage Javan515, complete genome) position: , mismatch: 4, identity: 0.867

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
tttgagagcgtggggctttttttatttgtc	Protospacer
  *  *************************

109. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448689 (Streptococcus phage Javan163, complete genome) position: , mismatch: 4, identity: 0.867

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aatttgagcgtggggttttttttatttaaa	Protospacer
***************.***********.

110. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448974 (Streptococcus phage Javan524, complete genome) position: , mismatch: 4, identity: 0.867

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aatttgagcgtggggttttttttatttaaa	Protospacer
***************.***********.

111. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448789 (Streptococcus phage Javan513, complete genome) position: , mismatch: 4, identity: 0.867

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aatttgagcgtggggttttttttatttaaa	Protospacer
***************.***********.

112. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448698 (Streptococcus phage Javan187, complete genome) position: , mismatch: 4, identity: 0.867

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aatttgagcgtagggctttttttattttat	Protospacer
***********.***************  .

113. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448818 (Streptococcus phage Javan597, complete genome) position: , mismatch: 4, identity: 0.867

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aatttgagcgtagggctttttttattctac	Protospacer
***********.**************.  *

114. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448796 (Streptococcus phage Javan53, complete genome) position: , mismatch: 4, identity: 0.867

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aagttgagcgtggggctttttttaatttcc	Protospacer
** ********************* ** .*

115. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448685 (Streptococcus phage Javan155, complete genome) position: , mismatch: 4, identity: 0.867

aatttg--agcgtggggctttttttatttgtc	CRISPR spacer
--tttgaaagcgtggggctttttttatttccc	Protospacer
  ****  ********************* .*

116. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MH853357 (Streptococcus phage LF3, partial genome) position: , mismatch: 4, identity: 0.867

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aagttgagcgtagggctttttttatttttt	Protospacer
** ********.*************** *.

117. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448731 (Streptococcus phage Javan33, complete genome) position: , mismatch: 4, identity: 0.867

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aagttgagcgtagggctttttttatttttt	Protospacer
** ********.*************** *.

118. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448932 (Streptococcus phage Javan42, complete genome) position: , mismatch: 4, identity: 0.867

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aatttgagcgtggggcttttttgttttatt	Protospacer
**********************  ***.*.

119. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448669 (Streptococcus phage Javan11, complete genome) position: , mismatch: 4, identity: 0.867

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aatttgagcgtggggcttttttgttttatt	Protospacer
**********************  ***.*.

120. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448853 (Streptococcus phage Javan144, complete genome) position: , mismatch: 4, identity: 0.867

aatttg--agcgtggggctttttttatttgtc	CRISPR spacer
--tttgaaagcgtggggctttttttatttccc	Protospacer
  ****  ********************* .*

121. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448690 (Streptococcus phage Javan169, complete genome) position: , mismatch: 4, identity: 0.867

aatttgagcgtggggcttttttt-atttgtc	CRISPR spacer
aatttgagcgtggggttttttttcatttaa-	Protospacer
***************.******* ****.

122. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448678 (Streptococcus phage Javan135, complete genome) position: , mismatch: 4, identity: 0.867

aatttgagcgtggggctttttttatttgtc-	CRISPR spacer
aatttgagcgtgggg-tttttttatttaaag	Protospacer
*************** ***********.

123. spacer 2.2|1487990|52|NZ_LR594034|CRISPRCasFinder matches to MK448828 (Streptococcus phage Javan69, complete genome) position: , mismatch: 4, identity: 0.923

aaatttcaccccagtattacctatataggtgtaagggatg-aaaacaacgatt	CRISPR spacer
aaatttcaccccagttttacctatataggtgtaagagatgaaaaacatcgat-	Protospacer
*************** *******************.**** ****** ****

124. spacer 1.5|1219576|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK449008 (Streptococcus phage Javan84, complete genome) position: , mismatch: 5, identity: 0.833

ttgacctctgctgctttgaatcctttttgg	CRISPR spacer
ttgacttctgctgctttgaatcctttagca	Protospacer
*****.********************   .

125. spacer 1.5|1219576|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448832 (Streptococcus phage Javan85, complete genome) position: , mismatch: 5, identity: 0.833

ttgacctctgctgctttgaatcctttttgg	CRISPR spacer
ttgacttctgctgctttgaatcctttagca	Protospacer
*****.********************   .

126. spacer 1.5|1219576|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MF417888 (Uncultured Caudovirales phage clone 9S_3, partial genome) position: , mismatch: 5, identity: 0.833

---ttgacctctgctgctttgaatcctttttgg	CRISPR spacer
agtttg---tctgctgcttttaatccttcttgg	Protospacer
   ***   *********** *******.****

127. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to AJ400629 (Streptococcus pneumoniae bacteriophage MM1 attachment site attP) position: , mismatch: 5, identity: 0.833

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aatttgagtgtggggatttttttatttcgt	Protospacer
********.****** ***********  .

128. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448675 (Streptococcus phage Javan129, complete genome) position: , mismatch: 5, identity: 0.833

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aatttgagcgtggggcttttttatttttct	Protospacer
**********************  *** ..

129. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448685 (Streptococcus phage Javan155, complete genome) position: , mismatch: 5, identity: 0.833

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aatttgagcgtggggcttttttactttact	Protospacer
**********************  ***...

130. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448829 (Streptococcus phage Javan7, complete genome) position: , mismatch: 5, identity: 0.833

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aagttgagcgtggggctttttttgtttcat	Protospacer
** ********************.***  .

131. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448860 (Streptococcus phage Javan172, complete genome) position: , mismatch: 5, identity: 0.833

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aatttgagcgtggggcttttttattttaat	Protospacer
**********************  ***. .

132. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448889 (Streptococcus phage Javan262, complete genome) position: , mismatch: 5, identity: 0.833

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aatttgagcgtggggcttttttatttttct	Protospacer
**********************  *** ..

133. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448792 (Streptococcus phage Javan521, complete genome) position: , mismatch: 5, identity: 0.833

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aaattgagcgtggggctttttttataattt	Protospacer
** **********************   *.

134. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448848 (Streptococcus phage Javan126, complete genome) position: , mismatch: 5, identity: 0.833

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aaattgagcgtggggctttttttataattt	Protospacer
** **********************   *.

135. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448965 (Streptococcus phage Javan506, complete genome) position: , mismatch: 5, identity: 0.833

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aagttgagcggggggctttttttattttgt	Protospacer
** ******* ****************  .

136. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448857 (Streptococcus phage Javan164, complete genome) position: , mismatch: 5, identity: 0.833

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aaattgagcgtggggctttttttataattt	Protospacer
** **********************   *.

137. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MH853355 (Streptococcus phage LF1, complete genome) position: , mismatch: 5, identity: 0.833

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aagttgagcgtggggctttttttgtttcat	Protospacer
** ********************.***  .

138. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448677 (Streptococcus phage Javan133, complete genome) position: , mismatch: 5, identity: 0.833

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aaattgagcgtggggctttttttataattt	Protospacer
** **********************   *.

139. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to NC_009018 (Streptococcus phage phi3396, complete genome) position: , mismatch: 5, identity: 0.833

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aaattgagcgtggggctttttttataattt	Protospacer
** **********************   *.

140. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448679 (Streptococcus phage Javan137, complete genome) position: , mismatch: 5, identity: 0.833

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aaattgagcgtggggctttttttataattt	Protospacer
** **********************   *.

141. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448959 (Streptococcus phage Javan488, complete genome) position: , mismatch: 5, identity: 0.833

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aagttgagcggggggctttttttattttgt	Protospacer
** ******* ****************  .

142. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to NC_004584 (Streptococcus prophage 315.1, complete genome) position: , mismatch: 5, identity: 0.833

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aaattgagcgtggggctttttttataattt	Protospacer
** **********************   *.

143. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448682 (Streptococcus phage Javan143, complete genome) position: , mismatch: 5, identity: 0.833

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aatttgagcgtagggctttttttataattt	Protospacer
***********.*************   *.

144. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448949 (Streptococcus phage Javan460, complete genome) position: , mismatch: 5, identity: 0.833

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aagttgagcggggggctttttttattttgt	Protospacer
** ******* ****************  .

145. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448850 (Streptococcus phage Javan132, complete genome) position: , mismatch: 5, identity: 0.833

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aatttgagcgtggggcttttttatttttct	Protospacer
**********************  *** ..

146. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448770 (Streptococcus phage Javan477, complete genome) position: , mismatch: 5, identity: 0.833

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aaattgagcgtggggctttttttataattt	Protospacer
** **********************   *.

147. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448978 (Streptococcus phage Javan532, complete genome) position: , mismatch: 5, identity: 0.833

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aaattgagcgtggggctttttttataattt	Protospacer
** **********************   *.

148. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MH853358 (Streptococcus phage LF4, complete genome) position: , mismatch: 5, identity: 0.833

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aagttgagcgtggggctttttttgtttcat	Protospacer
** ********************.***  .

149. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448845 (Streptococcus phage Javan118, complete genome) position: , mismatch: 5, identity: 0.833

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aatttgagcgtggggcttttttattttact	Protospacer
**********************  ***...

150. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448785 (Streptococcus phage Javan507, complete genome) position: , mismatch: 5, identity: 0.833

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aaattgagcgtggggctttttttataattt	Protospacer
** **********************   *.

151. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448853 (Streptococcus phage Javan144, complete genome) position: , mismatch: 5, identity: 0.833

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aatttgagcgtggggcttttttactttact	Protospacer
**********************  ***...

152. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to DQ113772 (Streptococcus pneumoniae bacteriophage MM1 1998, complete genome) position: , mismatch: 5, identity: 0.833

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aatttgagtgtggggatttttttatttcgt	Protospacer
********.****** ***********  .

153. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to AJ302074 (Streptococcus pneumoniae bacteriophage MM1 complete genome) position: , mismatch: 5, identity: 0.833

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aatttgagtgtggggatttttttatttcgt	Protospacer
********.****** ***********  .

154. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448723 (Streptococcus phage Javan271, complete genome) position: , mismatch: 5, identity: 0.833

---aatttgagcgtggggctttttttatttgtc	CRISPR spacer
gtggat---agtgtggggctttttttatttgtc	Protospacer
   .**   **.*********************

155. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to KC348600 (Streptococcus phage phi5218, complete genome) position: , mismatch: 5, identity: 0.833

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aatttgagcgtagggcttttttttattcta	Protospacer
***********.***********  ** *

156. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448884 (Streptococcus phage Javan246, complete genome) position: , mismatch: 5, identity: 0.833

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aaggcgagtgtggggatttttttatttgtc	Protospacer
**  .***.****** **************

157. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to EF116926 (Streptococcus phage SMP, complete genome) position: , mismatch: 5, identity: 0.833

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aagttgagcgtggggcttttttttattttt	Protospacer
** ********************  ** *.

158. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448798 (Streptococcus phage Javan533, complete genome) position: , mismatch: 5, identity: 0.833

aatttg--agcgtggggctttttttatttgtc	CRISPR spacer
--tttgaaagcgtggggctttttttagttatt	Protospacer
  ****  ****************** **.*.

159. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448967 (Streptococcus phage Javan510, complete genome) position: , mismatch: 5, identity: 0.833

aatttg--agcgtggggctttttttatttgtc	CRISPR spacer
--tttgaaagcgtggggctttttttagttatt	Protospacer
  ****  ****************** **.*.

160. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to NC_004588 (Streptococcus prophage 315.5, complete genome) position: , mismatch: 5, identity: 0.833

aatttg--agcgtggggctttttttatttgtc	CRISPR spacer
--tttgaaagcgtggggctttttttagttatt	Protospacer
  ****  ****************** **.*.

161. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to KT337367 (Streptococcus phage phiARI0826b, partial genome) position: , mismatch: 6, identity: 0.8

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
cttctgagcgtggggctttttttgtttgca	Protospacer
  *.*******************.****.

162. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to KT337369 (Streptococcus phage phiARI0831b, partial genome) position: , mismatch: 6, identity: 0.8

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
cttctgagcgtggggctttttttgtttgca	Protospacer
  *.*******************.****.

163. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448733 (Streptococcus phage Javan345, complete genome) position: , mismatch: 6, identity: 0.8

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
tttgagagcgtggggctttttttatttctt	Protospacer
  *  ********************** *.

164. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to FR671407 (Streptococcus phage 34117) position: , mismatch: 6, identity: 0.8

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
cttctgagcgtggggcttttttgagttgtt	Protospacer
  *.****************** * ****.

165. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448647 (Streptococcus satellite phage Javan759, complete genome) position: , mismatch: 6, identity: 0.8

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
cttctgagcgtggggcttttttgagttgtt	Protospacer
  *.****************** * ****.

166. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448621 (Streptococcus satellite phage Javan734, complete genome) position: , mismatch: 6, identity: 0.8

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
cttctgagcgtggggcttttttgagttgtt	Protospacer
  *.****************** * ****.

167. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to NC_024361 (Streptococcus phage DCC1738, complete sequence) position: , mismatch: 6, identity: 0.8

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
cttctgagcgtggggcttttttgagttgtt	Protospacer
  *.****************** * ****.

168. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to KT337359 (Streptococcus phage phiARI0468b-3, partial genome) position: , mismatch: 6, identity: 0.8

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
cttctgagcgtggggcttttttgagttgtt	Protospacer
  *.****************** * ****.

169. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to NC_031929 (Streptococcus phage phiARI0468-1, complete genome) position: , mismatch: 6, identity: 0.8

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
cttctgagcgtggggcttttttgagttgtt	Protospacer
  *.****************** * ****.

170. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to NC_024357 (Streptococcus phage K13, complete sequence) position: , mismatch: 6, identity: 0.8

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
cttctgagcgtggggcttttttgagttgtt	Protospacer
  *.****************** * ****.

171. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to NC_031920 (Streptococcus phage phiARI0004, complete genome) position: , mismatch: 6, identity: 0.8

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
cttctgagcgtggggcttttttgagttgtt	Protospacer
  *.****************** * ****.

172. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to FR671406 (Streptococcus phage 040922) position: , mismatch: 6, identity: 0.8

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
cttctgagcgtggggcttttttgagttgtt	Protospacer
  *.****************** * ****.

173. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448445 (Streptococcus satellite phage Javan344, complete genome) position: , mismatch: 6, identity: 0.8

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
cttctgagcgtggggcttttttgagttgtt	Protospacer
  *.****************** * ****.

174. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to KY065451 (Streptococcus phage IPP9, complete genome) position: , mismatch: 6, identity: 0.8

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
cttctgagcgtggggcttttttgagttgtt	Protospacer
  *.****************** * ****.

175. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448718 (Streptococcus phage Javan253, complete genome) position: , mismatch: 6, identity: 0.8

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aatttgagcgtagggcttttttgtgttatt	Protospacer
***********.**********   **.*.

176. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448715 (Streptococcus phage Javan247, complete genome) position: , mismatch: 6, identity: 0.8

aattt---gagcgtggggctttttttatttgtc	CRISPR spacer
---ttagagagcgtggggcttttttgttttgtt	Protospacer
   **   *****************  *****.

177. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448673 (Streptococcus phage Javan119, complete genome) position: , mismatch: 6, identity: 0.8

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aatttgagcgtggggtttttttatttgatt	Protospacer
***************.******  ** .*.

178. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to KC348598 (Streptococcus phage phi20c, complete genome) position: , mismatch: 6, identity: 0.8

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aagttgagcgtagggctttttttttattta	Protospacer
** ********.*********** * * *

179. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448803 (Streptococcus phage Javan551, complete genome) position: , mismatch: 6, identity: 0.8

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aagttgagcgtagggctttttttttattta	Protospacer
** ********.*********** * * *

180. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448981 (Streptococcus phage Javan548, complete genome) position: , mismatch: 6, identity: 0.8

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aagttgagcgtagggctttttttttattta	Protospacer
** ********.*********** * * *

181. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448812 (Streptococcus phage Javan577, complete genome) position: , mismatch: 6, identity: 0.8

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aagttgagcgtagggcttttttttattcta	Protospacer
** ********.***********  ** *

182. spacer 1.1|1219312|30|NZ_LR594034|CRISPRCasFinder,CRT matches to NZ_CP042928 (Bacillus cereus strain G1-1 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

agcgaattagtaaaagtaatctgtttactt	CRISPR spacer
atgaaattagtaaaattaatctgttgaatc	Protospacer
*  .*********** ********* * *.

183. spacer 1.1|1219312|30|NZ_LR594034|CRISPRCasFinder,CRT matches to NZ_CP040341 (Bacillus cereus strain DLOU-Tangshan plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

agcgaattagtaaaagtaatctgtttactt	CRISPR spacer
atgaaattagtaaaattaatctgttgaatc	Protospacer
*  .*********** ********* * *.

184. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448851 (Streptococcus phage Javan14, complete genome) position: , mismatch: 7, identity: 0.767

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
tttgagagcgtggggctttttttatttcca	Protospacer
  *  ********************** .

185. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448621 (Streptococcus satellite phage Javan734, complete genome) position: , mismatch: 7, identity: 0.767

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
accgagagcgtggggctttttatttttgta	Protospacer
* .  **************** * *****

186. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to KT337345 (Streptococcus phage phiARI0285-1, partial genome) position: , mismatch: 7, identity: 0.767

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
tttgagagcgtggggctttttttgtttgca	Protospacer
  *  ******************.****.

187. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to NC_024370 (Streptococcus phage IC1, complete sequence) position: , mismatch: 7, identity: 0.767

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
tttgagagcgtggggctttttttgtttgca	Protospacer
  *  ******************.****.

188. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to FR671411 (Streptococcus phage 2167) position: , mismatch: 7, identity: 0.767

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
tttgagagcgtggggctttttttgtttgca	Protospacer
  *  ******************.****.

189. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448862 (Streptococcus phage Javan178, complete genome) position: , mismatch: 7, identity: 0.767

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aagttgagcgtggggcttttttaataaaat	Protospacer
** ******************* **  . .

190. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448986 (Streptococcus phage Javan570, complete genome) position: , mismatch: 7, identity: 0.767

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
cttctgagcgtggggcttttttaattttct	Protospacer
  *.****************** **** ..

191. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to KY065486 (Streptococcus phage IPP46, complete genome) position: , mismatch: 7, identity: 0.767

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
tttgagagcgtggggctttttttgtttgca	Protospacer
  *  ******************.****.

192. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448480 (Streptococcus satellite phage Javan410, complete genome) position: , mismatch: 7, identity: 0.767

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
ccggcgggagtggggctttttttatttgtc	Protospacer
    .*.* *********************

193. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448618 (Streptococcus satellite phage Javan731, complete genome) position: , mismatch: 7, identity: 0.767

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
accgagagcgtggggcttttttgagttgtt	Protospacer
* .  ***************** * ****.

194. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448618 (Streptococcus satellite phage Javan731, complete genome) position: , mismatch: 7, identity: 0.767

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
accgagagcgtggggctttttatttttgta	Protospacer
* .  **************** * *****

195. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448433 (Streptococcus satellite phage Javan328, complete genome) position: , mismatch: 7, identity: 0.767

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
accgagagcgtggggcttttttgagttgtt	Protospacer
* .  ***************** * ****.

196. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448615 (Streptococcus satellite phage Javan728, complete genome) position: , mismatch: 7, identity: 0.767

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
accgagagcgtggggcttttttgagttgtt	Protospacer
* .  ***************** * ****.

197. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448607 (Streptococcus satellite phage Javan720, complete genome) position: , mismatch: 7, identity: 0.767

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
accgagagcgtggggcttttttgagttgtt	Protospacer
* .  ***************** * ****.

198. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448619 (Streptococcus satellite phage Javan732, complete genome) position: , mismatch: 7, identity: 0.767

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
accgagagcgtggggcttttttgagttgtt	Protospacer
* .  ***************** * ****.

199. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448608 (Streptococcus satellite phage Javan721, complete genome) position: , mismatch: 7, identity: 0.767

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
accgagagcgtggggctttttatttttgta	Protospacer
* .  **************** * *****

200. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448638 (Streptococcus satellite phage Javan750, complete genome) position: , mismatch: 7, identity: 0.767

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
accgagagcgtggggctttttatttttgta	Protospacer
* .  **************** * *****

201. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448639 (Streptococcus satellite phage Javan751, complete genome) position: , mismatch: 7, identity: 0.767

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
accgagagcgtggggctttttatttttgta	Protospacer
* .  **************** * *****

202. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448779 (Streptococcus phage Javan497, complete genome) position: , mismatch: 7, identity: 0.767

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aagttgagcgtggggcttttttatttaaag	Protospacer
** *******************  ** .

203. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448968 (Streptococcus phage Javan512, complete genome) position: , mismatch: 7, identity: 0.767

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aagttgagcgtggggcttttttatttaaag	Protospacer
** *******************  ** .

204. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448797 (Streptococcus phage Javan531, complete genome) position: , mismatch: 7, identity: 0.767

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aagttgagcgtggggcttttttatttaaag	Protospacer
** *******************  ** .

205. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448783 (Streptococcus phage Javan503, complete genome) position: , mismatch: 7, identity: 0.767

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
ggttggagcgtggggctttttttagctatt	Protospacer
..** ******************* .*.*.

206. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to KY349816 (Streptococcus phage Str01, complete genome) position: , mismatch: 7, identity: 0.767

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
ggttggagcgtggggctttttttagctatt	Protospacer
..** ******************* .*.*.

207. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to NC_004589 (Streptococcus prophage 315.6, complete genome) position: , mismatch: 7, identity: 0.767

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
aagttgagcgtggggcttttttatttaaag	Protospacer
** *******************  ** .

208. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP035001 (Rhizobium acidisoli strain FH23 plasmid pRapFH23c, complete sequence) position: , mismatch: 7, identity: 0.767

---aatttgagcgtggggctttttttatttgtc	CRISPR spacer
cccgcttcg---gtggggctttttttaattgtc	Protospacer
   . **.*   *************** *****

209. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK044829 (Streptococcus phage 109751, complete genome) position: , mismatch: 7, identity: 0.767

aatttg---agcgtggggctttttttatttgtc	CRISPR spacer
---tcggatagcgtggggcttttttgagttgtt	Protospacer
   *.*   **************** * ****.

210. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448763 (Streptococcus phage Javan451, complete genome) position: , mismatch: 7, identity: 0.767

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
ggttggagcgtggggcttttttttatttta	Protospacer
..** ******************  ** *

211. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448464 (Streptococcus satellite phage Javan387, complete genome) position: , mismatch: 7, identity: 0.767

aatttgagcgtggggctttttttatttgtc-	CRISPR spacer
gtggagagtgtggggcttttttta-ttgtcg	Protospacer
.    ***.*************** *****

212. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to KY065488 (Streptococcus phage IPP50, complete genome) position: , mismatch: 7, identity: 0.767

aatttg---agcgtggggctttttttatttgtc	CRISPR spacer
---tcggatagcgtggggcttttttgagttgtt	Protospacer
   *.*   **************** * ****.

213. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448475 (Streptococcus satellite phage Javan403, complete genome) position: , mismatch: 7, identity: 0.767

aatttgagcgtggggctttttttatttgtc-	CRISPR spacer
gtggagagtgtggggcttttttta-ttgtcg	Protospacer
.    ***.*************** *****

214. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to KY065467 (Streptococcus phage IPP26, complete genome) position: , mismatch: 7, identity: 0.767

aatttg---agcgtggggctttttttatttgtc	CRISPR spacer
---tcggatagcgtggggcttttttgagttgtt	Protospacer
   *.*   **************** * ****.

215. spacer 1.6|1219642|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448729 (Streptococcus phage Javan31, complete genome) position: , mismatch: 8, identity: 0.733

cctaaggcaataacaagaattgttagcaag	CRISPR spacer
aatccagcaacaacaagaagtgttagcaaa	Protospacer
  *  .****.******** *********.

216. spacer 1.6|1219642|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448691 (Streptococcus phage Javan17, complete genome) position: , mismatch: 8, identity: 0.733

cctaaggcaataacaagaattgttagcaag	CRISPR spacer
aatccagcaacaacaagaagtgttagcaaa	Protospacer
  *  .****.******** *********.

217. spacer 1.6|1219642|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448948 (Streptococcus phage Javan46, complete genome) position: , mismatch: 8, identity: 0.733

cctaaggcaataacaagaattgttagcaag	CRISPR spacer
aatccagcaacaacaagaagtgttagcaaa	Protospacer
  *  .****.******** *********.

218. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448480 (Streptococcus satellite phage Javan410, complete genome) position: , mismatch: 8, identity: 0.733

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
acggatgatgtggggctttttttatttgtc	Protospacer
*     ...*********************

219. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448859 (Streptococcus phage Javan170, complete genome) position: , mismatch: 8, identity: 0.733

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
tttgagagcgtggggctttttttagttaaa	Protospacer
  *  ******************* **.

220. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448676 (Streptococcus phage Javan131, complete genome) position: , mismatch: 8, identity: 0.733

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
tttgagagcgtggggctttttttagttaaa	Protospacer
  *  ******************* **.

221. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448688 (Streptococcus phage Javan161, complete genome) position: , mismatch: 8, identity: 0.733

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
tttgagagcgtggggctttttttagttaaa	Protospacer
  *  ******************* **.

222. spacer 1.1|1219312|30|NZ_LR594034|CRISPRCasFinder,CRT matches to MT774401 (CrAssphage cr6_1, complete genome) position: , mismatch: 9, identity: 0.7

agcgaattagtaaaagtaatctgtttactt	CRISPR spacer
ttactattagtaaaagtaataggtttacca	Protospacer
     ***************  ******.

223. spacer 1.5|1219576|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to GU943073 (Uncultured phage MedDCM-OCT-S08-C41 genomic sequence) position: , mismatch: 10, identity: 0.667

ttgacctctgctgctttgaatcctttttgg	CRISPR spacer
gaaggctctgctgttttgaatcctttagtc	Protospacer
  .. ********.************

224. spacer 1.7|1219708|30|NZ_LR594034|CRISPRCasFinder,CRT,PILER-CR matches to MK448896 (Streptococcus phage Javan278, complete genome) position: , mismatch: 10, identity: 0.667

aatttgagcgtggggctttttttatttgtc	CRISPR spacer
gtcggcagcgtggggatttttttattttgt	Protospacer
. .   ********* ***********  .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

38503 : 48916

Microbacterium_phage(16.67%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_138098109.1\|38503_42229_+	phosphoribosylformylglycinamidine synthase	A6N228	Microbacterium_phage	3.8e-34	25.8
WP_003056405.1\|42347_43799_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	5.5e-58	34.0
WP_003062570.1\|43951_44980_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A1D7SE90	Cyanophage	3.7e-64	43.6
WP_003056410.1\|44972_45527_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	3.8e-23	34.1
WP_015057184.1\|45633_46146_+	VanZ family protein	NA	NA	NA	NA
WP_048327927.1\|46164_47709_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	1.6e-76	48.4
WP_003055557.1\|47788_48916_-	SH3 domain-containing protein	F8HGP2	Streptococcus_phage	9.1e-08	28.6

DBSCAN-SWA_2

280189 : 343791

unidentified_phage(27.27%)

holin,tRNA,integrase,transposase

attL 279080:279096|attR 291007:291023

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
279080:279096	attL	NA	NA	NA	NA
WP_022554204.1\|280189_281158_+\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	1.2e-37	33.1
WP_002982710.1\|281447_281894_+	50S ribosomal protein L13	NA	NA	NA	NA
WP_002982716.1\|281914_282307_+	30S ribosomal protein S9	NA	NA	NA	NA
WP_080554381.1\|282414_282777_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_138098234.1\|282887_284609_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_012766554.1\|285078_286419_+	PTS galactitol transporter subunit IIC	NA	NA	NA	NA
WP_012766555.1\|286415_286700_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_012766556.1\|286701_287541_+	class II fructose-bisphosphate aldolase	NA	NA	NA	NA
WP_138083690.1\|287540_288218_+	triose-phosphate isomerase	NA	NA	NA	NA
WP_015057312.1\|288998_289814_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_170078128.1\|289904_290927_+\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	4.8e-40	33.0
WP_003057148.1\|296595_297078_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
291007:291023	attR	NA	NA	NA	NA
WP_003061640.1\|297309_298659_-	aspartate kinase	NA	NA	NA	NA
WP_015016673.1\|298804_299554_+\|tRNA	tRNA pseudouridine(38-40) synthase TruA	NA	NA	NA	NA
WP_003060317.1\|299543_300311_+	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA
WP_003054849.1\|300297_300771_+	ECF transporter S component	NA	NA	NA	NA
WP_003054866.1\|300781_301345_+	TIGR01440 family protein	NA	NA	NA	NA
WP_003061406.1\|301407_302253_-	mechanosensitive ion channel family protein	NA	NA	NA	NA
WP_003062553.1\|304304_305678_+	alpha-amylase	NA	NA	NA	NA
WP_003054863.1\|305885_307169_+	trigger factor	NA	NA	NA	NA
WP_003054843.1\|307382_307961_+	DNA-directed RNA polymerase subunit delta	NA	NA	NA	NA
WP_065957331.1\|308244_309849_+	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	2.1e-138	46.4
WP_115256747.1\|309924_311685_+	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	3.7e-64	31.2
WP_003054874.1\|311681_312410_+	LytTR family transcriptional regulator DNA-binding domain-containing protein	NA	NA	NA	NA
WP_003054858.1\|312541_312991_+\|holin	antiholin-like murein hydrolase modulator LrgA	NA	NA	NA	NA
WP_003060147.1\|313008_313716_+\|holin	antiholin-like protein LrgB	NA	NA	NA	NA
WP_065355386.1\|313875_314802_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_063633098.1\|315146_316028_+	fructose-bisphosphate aldolase	NA	NA	NA	NA
WP_002982870.1\|316571_316760_+	50S ribosomal protein L28	NA	NA	NA	NA
WP_003054896.1\|316913_317279_+	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA
WP_003054905.1\|317278_318943_+	DAK2 domain-containing protein	NA	NA	NA	NA
WP_003054883.1\|319178_320069_+	SPFH domain-containing protein	A0A1V0SL90	Klosneuvirus	2.3e-38	35.6
WP_000818733.1\|320205_320322_-	putative metal homeostasis protein	NA	NA	NA	NA
WP_002991131.1\|320463_321204_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.4e-25	38.8
WP_138098236.1\|321196_322765_-	ABC transporter substrate-binding protein/permease	NA	NA	NA	NA
WP_046159713.1\|322963_324889_+	DUF2207 domain-containing protein	NA	NA	NA	NA
WP_015057324.1\|324954_325794_+	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA
WP_003059809.1\|325937_326699_+	adaptor protein MecA	NA	NA	NA	NA
WP_003054822.1\|326705_327875_+	undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase	NA	NA	NA	NA
WP_003061584.1\|327987_328758_+	Fe-S cluster assembly ATPase SufC	A0A1M7XV31	Cedratvirus	1.4e-07	24.2
WP_138083695.1\|328854_330117_+	Fe-S cluster assembly protein SufD	NA	NA	NA	NA
WP_065957336.1\|330147_331374_+	cysteine desulfurase	Q2XUY6	environmental_halophage	2.7e-106	46.7
WP_003062583.1\|331360_331837_+	SUF system NifU family Fe-S cluster assembly protein	NA	NA	NA	NA
WP_003054855.1\|331829_333248_+	Fe-S cluster assembly protein SufB	NA	NA	NA	NA
WP_012766577.1\|333423_334605_-	D-alanyl-D-alanine carboxypeptidase	B6DZZ7	Stx2-converting_phage	3.2e-11	28.8
WP_003057819.1\|334748_335987_-	D-alanyl-D-alanine carboxypeptidase	NA	NA	NA	NA
WP_110408040.1\|336317_338288_+	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003057826.1\|338353_339856_+	ABC transporter permease	NA	NA	NA	NA
WP_003049687.1\|339855_340782_+	ABC transporter permease	NA	NA	NA	NA
WP_003057822.1\|340790_341861_+	ABC transporter ATP-binding protein	NA	NA	NA	NA
WP_003057816.1\|341853_342777_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.5e-21	33.6
WP_138098238.1\|342804_343791_-\|transposase	IS30 family transposase	H7BVY4	unidentified_phage	2.9e-34	32.2

DBSCAN-SWA_3

426145 : 435709

Streptococcus_phage(81.82%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_138098260.1\|426145_426910_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	5.5e-17	28.3
WP_171841621.1\|426915_427620_+	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	3.0e-17	28.4
WP_003059946.1\|427664_428327_+	CBS domain-containing protein	M1NSC5	Streptococcus_phage	1.2e-60	57.4
WP_012766617.1\|428413_429049_+	dTMP kinase	M1PSC7	Streptococcus_phage	1.8e-69	66.3
WP_138098262.1\|429064_429937_+	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	6.9e-56	41.7
WP_003058683.1\|429933_430734_+	signal peptidase II	NA	NA	NA	NA
WP_003058686.1\|430726_431050_+	DNA replication initiation control protein YabA	M1PFV3	Streptococcus_phage	7.0e-30	64.2
WP_003058668.1\|431054_431918_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	3.5e-116	76.0
WP_003058684.1\|431944_432337_+	hypothetical protein	NA	NA	NA	NA
WP_003058655.1\|432383_433013_-	copper homeostasis protein CutC	NA	NA	NA	NA
WP_003061119.1\|433129_434221_+	3-phosphoserine/phosphohydroxythreonine transaminase	M1Q1P2	Streptococcus_phage	3.7e-131	63.4
WP_003061315.1\|434246_434798_+	GNAT family N-acetyltransferase	M1PSC3	Streptococcus_phage	3.0e-49	53.6
WP_138098264.1\|434858_435356_+	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	1.5e-39	52.3
WP_003060040.1\|435352_435709_+	arsenate reductase family protein	M1PLC0	Streptococcus_phage	1.8e-39	65.0

DBSCAN-SWA_4

451454 : 501496

Mycobacterium_phage(16.67%)

bacteriocin,transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_172600593.1\|451454_453452_+\|tRNA	methionine--tRNA ligase	A0A1V0SHR2	Klosneuvirus	6.0e-87	35.7
WP_003055629.1\|453985_454999_+	class 1b ribonucleoside-diphosphate reductase subunit beta	R4TBI6	Mycobacterium_phage	2.9e-98	53.4
WP_003055616.1\|455002_455476_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	F8WQ19	Bacillus_phage	3.7e-11	37.8
WP_003055626.1\|455459_457646_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	A8E2R1	Enterococcus_phage	2.9e-167	43.1
WP_003055639.1\|457943_459278_+	branched-chain amino acid transport system II carrier protein	NA	NA	NA	NA
WP_003054342.1\|459676_460030_+	hypothetical protein	NA	NA	NA	NA
WP_003054401.1\|460340_460577_+	DUF2829 domain-containing protein	NA	NA	NA	NA
WP_138098274.1\|460569_461268_+	3-oxoacyl-ACP reductase	NA	NA	NA	NA
WP_003049859.1\|461264_461507_+	DUF3977 family protein	NA	NA	NA	NA
WP_138098276.1\|461524_461974_+	ASCH domain-containing protein	NA	NA	NA	NA
WP_138098278.1\|461975_462935_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_003054334.1\|463268_464606_+	MFS transporter	NA	NA	NA	NA
WP_003054369.1\|464777_466160_+	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	A0A2K9L4K9	Tupanvirus	1.6e-30	35.6
WP_003054386.1\|466190_466745_+	NUDIX hydrolase	NA	NA	NA	NA
WP_003054365.1\|466745_466997_+	hypothetical protein	NA	NA	NA	NA
WP_003054376.1\|467014_467710_+	5'-methylthioadenosine/adenosylhomocysteine nucleosidase	NA	NA	NA	NA
WP_003054353.1\|467782_468430_-	metal-dependent transcriptional regulator	NA	NA	NA	NA
WP_003054333.1\|468575_469508_+	metal ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003054363.1\|469572_470298_+	metal ABC transporter ATP-binding protein	A0A1V0SE00	Indivirus	8.1e-18	31.8
WP_003054335.1\|470298_471147_+	metal ABC transporter permease	NA	NA	NA	NA
WP_003054349.1\|471277_472084_-	peptidylprolyl isomerase	A0A2H4UTF4	Bodo_saltans_virus	2.1e-22	37.8
WP_138098280.1\|472301_474710_+	DNA translocase FtsK	S5VNE3	Mycobacterium_phage	2.5e-87	51.1
WP_012766635.1\|474778_475132_-	DUF3397 domain-containing protein	NA	NA	NA	NA
WP_003049875.1\|475375_475801_+	50S ribosomal protein L11	NA	NA	NA	NA
WP_003049876.1\|475906_476596_+	50S ribosomal protein L1	NA	NA	NA	NA
WP_003054374.1\|477053_477221_-	hypothetical protein	NA	NA	NA	NA
WP_003049878.1\|477502_478231_+	UMP kinase	NA	NA	NA	NA
WP_003054381.1\|478259_478817_+	ribosome recycling factor	NA	NA	NA	NA
WP_003054345.1\|478925_479783_+	S1 RNA-binding domain-containing protein	NA	NA	NA	NA
WP_003054395.1\|479855_480365_+	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA
WP_003054340.1\|480361_480577_+	YozE family protein	NA	NA	NA	NA
WP_046159274.1\|480736_481933_+	LysM peptidoglycan-binding domain-containing protein	A0A0E3XB61	Gordonia_phage	2.8e-15	38.7
WP_003054339.1\|482243_484016_+	oleate hydratase	NA	NA	NA	NA
WP_046159272.1\|484176_485238_+	PhoH family protein	W8D063	Erwinia_phage	3.2e-47	48.6
WP_046159271.1\|485284_485860_+	uracil-DNA glycosylase family protein	NA	NA	NA	NA
WP_003054373.1\|486018_486516_+	rRNA maturation RNase YbeY	NA	NA	NA	NA
WP_003054389.1\|486496_486904_+	diacylglycerol kinase	NA	NA	NA	NA
WP_002985743.1\|487024_487921_+	GTPase Era	NA	NA	NA	NA
WP_022554331.1\|489856_490093_-\|bacteriocin	bacteriocin processing peptidase	NA	NA	NA	NA
WP_022554332.1\|490394_490622_+	hypothetical protein	NA	NA	NA	NA
WP_002994587.1\|490670_490988_+	hypothetical protein	NA	NA	NA	NA
WP_003054359.1\|491395_491635_+\|bacteriocin	bacteriocin	NA	NA	NA	NA
WP_003054392.1\|491648_491834_+	hypothetical protein	NA	NA	NA	NA
WP_065358913.1\|492086_492320_+	hypothetical protein	NA	NA	NA	NA
WP_022554244.1\|492502_493636_+\|transposase	ISAs1-like element IS1548 family transposase	NA	NA	NA	NA
WP_065358564.1\|493842_494592_+	response regulator transcription factor	NA	NA	NA	NA
WP_065358565.1\|494592_495927_+	GHKL domain-containing protein	NA	NA	NA	NA
WP_011017462.1\|496074_496200_-\|bacteriocin	ComC/BlpC family leader-containing pheromone/bacteriocin	NA	NA	NA	NA
WP_172600594.1\|497440_498463_-\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	8.2e-40	33.0
WP_138098286.1\|498828_500982_-	peptide cleavage/export ABC transporter	W8CYL7	Bacillus_phage	2.0e-43	28.5
WP_042361549.1\|501268_501496_+\|bacteriocin	bacteriocin BlpM	NA	NA	NA	NA

DBSCAN-SWA_5

820410 : 878170

Bacillus_phage(21.43%)

tRNA,transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_172600556.1\|820410_821433_-\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	3.1e-39	32.7
WP_003056242.1\|821645_821918_+	30S ribosomal protein S16	NA	NA	NA	NA
WP_003050244.1\|821927_822167_+	KH domain-containing protein	NA	NA	NA	NA
WP_111681655.1\|822433_823891_+	cell surface protein	NA	NA	NA	NA
WP_111681656.1\|824266_824785_+	ribosome maturation factor RimM	NA	NA	NA	NA
WP_003056334.1\|824774_825506_+\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_003056269.1\|825505_826498_+	NAD(P)/FAD-dependent oxidoreductase	Q9JRK7	Streptococcus_phage	1.8e-28	54.1
WP_046159609.1\|826686_827745_+	PTS transporter subunit IIC	NA	NA	NA	NA
WP_015016910.1\|827757_828681_+	2-dehydropantoate 2-reductase	NA	NA	NA	NA
WP_012766828.1\|828915_829629_+	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA
WP_003056325.1\|829625_830537_+	1-phosphofructokinase	NA	NA	NA	NA
WP_015057498.1\|830533_832480_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_065358627.1\|832571_833171_+	glycoside hydrolase family 73 protein	NA	NA	NA	NA
WP_014612206.1\|833330_834038_+	glycoside hydrolase family 73 protein	S5M633	Brevibacillus_phage	5.5e-11	41.1
WP_042357892.1\|834088_834610_+	hypothetical protein	NA	NA	NA	NA
WP_003056276.1\|834681_835062_+	DUF1149 family protein	NA	NA	NA	NA
WP_003056308.1\|835061_835910_+	DegV family protein	NA	NA	NA	NA
WP_172452860.1\|836029_837238_+\|tRNA	CCA tRNA nucleotidyltransferase	H7BUW3	unidentified_phage	9.0e-38	45.0
WP_138098354.1\|837234_839112_+	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	2.5e-63	31.6
WP_138098355.1\|839219_840965_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	5.9e-38	25.3
WP_138098357.1\|840964_842737_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	7.2e-52	28.9
WP_046177118.1\|842926_844276_+	NADP-specific glutamate dehydrogenase	NA	NA	NA	NA
WP_012766836.1\|844400_844811_+	peptide deformylase	NA	NA	NA	NA
WP_138098359.1\|844998_847023_-	bifunctional metallophosphatase/5'-nucleotidase	NA	NA	NA	NA
WP_002984988.1\|847241_847892_+	GTP pyrophosphokinase family protein	NA	NA	NA	NA
WP_002984985.1\|847894_848563_+	response regulator transcription factor	A0A1J0GWE0	Alteromonas_phage	5.6e-05	23.0
WP_010922165.1\|848571_849804_+	HAMP domain-containing histidine kinase	NA	NA	NA	NA
WP_084916894.1\|850097_850976_+	mevalonate kinase	NA	NA	NA	NA
WP_046177119.1\|850957_851902_+	diphosphomevalonate decarboxylase	NA	NA	NA	NA
WP_015057510.1\|851894_852908_+	phosphomevalonate kinase	NA	NA	NA	NA
WP_138098361.1\|852894_853887_+	type 2 isopentenyl-diphosphate Delta-isomerase	NA	NA	NA	NA
WP_138098363.1\|854872_855493_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_046166062.1\|855686_856646_-	1-phosphofructokinase family hexose kinase	NA	NA	NA	NA
WP_022554521.1\|856654_857392_-	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA
WP_138098365.1\|857664_858129_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_044565364.1\|858131_858434_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_046166063.1\|858443_859799_+	PTS galactitol transporter subunit IIC	NA	NA	NA	NA
WP_022554527.1\|860026_860764_+	class II aldolase/adducin family protein	NA	NA	NA	NA
WP_138098367.1\|860794_861484_+	ribulose-phosphate 3-epimerase	NA	NA	NA	NA
WP_138098369.1\|863216_864321_+\|transposase	IS3 family transposase	A0A2I7SC85	Paenibacillus_phage	2.2e-70	49.6
WP_138098371.1\|865072_866350_-	hydroxymethylglutaryl-CoA reductase, degradative	NA	NA	NA	NA
WP_065957085.1\|866330_867512_-	hydroxymethylglutaryl-CoA synthase	NA	NA	NA	NA
WP_003054196.1\|867729_868569_+	thymidylate synthase	U5J9N5	Bacillus_phage	9.2e-82	53.2
WP_003054187.1\|868649_869147_+	dihydrofolate reductase	A0A0A8JB64	Ralstonia_phage	8.3e-14	28.2
WP_003054200.1\|869166_869337_+	hypothetical protein	NA	NA	NA	NA
WP_003054192.1\|869450_870680_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	4.6e-138	60.5
WP_012766850.1\|870689_871289_+	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA
WP_138098373.1\|871432_872176_+	hypothetical protein	NA	NA	NA	NA
WP_138098375.1\|872232_874332_-\|protease	ATP-dependent Clp protease ATP-binding subunit	H6X3M6	Enterobacteria_phage	2.4e-118	38.0
WP_003050354.1\|875735_876236_+	50S ribosomal protein L10	NA	NA	NA	NA
WP_003043797.1\|876300_876666_+	50S ribosomal protein L7/L12	NA	NA	NA	NA
WP_138098377.1\|877043_878170_-\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	6.9e-16	27.7

DBSCAN-SWA_6

1088499 : 1194407

111

Streptococcus_phage(35.38%)

tail,transposase,terminase,capsid,portal,tRNA,integrase

attL 1122005:1122064|attR 1164428:1164539

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_138098441.1\|1088499_1089384_-\|tRNA	tRNA pseudouridine(55) synthase TruB	NA	NA	NA	NA
WP_138098443.1\|1089499_1090840_-	DUF2130 domain-containing protein	NA	NA	NA	NA
WP_022554679.1\|1090945_1091902_-	aromatic acid exporter family protein	NA	NA	NA	NA
WP_138098445.1\|1091912_1092509_-	restriction endonuclease subunit S	NA	NA	NA	NA
WP_172600607.1\|1092590_1095233_-	FtsX-like permease family protein	NA	NA	NA	NA
WP_003057753.1\|1095245_1095947_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.0e-37	40.5
WP_110408125.1\|1096066_1096618_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_003057737.1\|1096734_1097376_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_138098449.1\|1097525_1098014_-	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA
WP_065974227.1\|1098041_1098239_-	CsbD family protein	NA	NA	NA	NA
WP_002984475.1\|1098279_1098819_-	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA
WP_002984473.1\|1098831_1099020_-	DUF2273 domain-containing protein	NA	NA	NA	NA
WP_002984470.1\|1099030_1099642_-	alkaline shock response membrane anchor protein AmaP	NA	NA	NA	NA
WP_002984469.1\|1099678_1099927_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA
WP_138098451.1\|1100289_1102608_-	DNA helicase PcrA	A7KV33	Bacillus_phage	6.4e-133	42.1
WP_138098453.1\|1103128_1104466_+	sodium:alanine symporter family protein	NA	NA	NA	NA
WP_138098455.1\|1104571_1105807_+	cation transporter	NA	NA	NA	NA
WP_110407969.1\|1107514_1108357_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_002984457.1\|1108369_1108999_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.3e-27	35.5
WP_002992417.1\|1109008_1109650_-	amino acid ABC transporter permease	NA	NA	NA	NA
WP_003053558.1\|1109756_1110092_-	alkylphosphonate utilization protein	NA	NA	NA	NA
WP_012767006.1\|1110290_1112105_-	glutamine--fructose-6-phosphate transaminase (isomerizing)	A7IW18	Paramecium_bursaria_Chlorella_virus	3.1e-98	38.5
WP_003053555.1\|1112288_1112846_-	signal peptidase I	NA	NA	NA	NA
WP_003053551.1\|1113011_1114514_-	pyruvate kinase	NA	NA	NA	NA
WP_003053569.1\|1114576_1115590_-	6-phosphofructokinase	NA	NA	NA	NA
WP_065957124.1\|1115669_1118780_-	DNA polymerase III subunit alpha	A0A2L1IZ23	Streptomyces_phage	7.5e-121	29.2
WP_003053565.1\|1118966_1119338_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_003053563.1\|1119337_1120036_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	3.7e-20	27.7
WP_003053541.1\|1120045_1120834_+	hypothetical protein	NA	NA	NA	NA
WP_003053567.1\|1120969_1121584_-	TVP38/TMEM64 family protein	M1Q152	Streptococcus_phage	8.6e-53	55.4
1122005:1122064	attL	NA	NA	NA	NA
WP_012767008.1\|1122174_1122363_-	hypothetical protein	A3F673	Streptococcus_phage	3.9e-17	76.3
WP_012767009.1\|1122601_1123585_+	DNA/RNA non-specific endonuclease	A7J2B8	Streptococcus_phage	9.2e-166	97.7
WP_011888781.1\|1123646_1123847_-	CsbD family protein	J7KJ36	Streptococcus_phage	5.3e-20	81.8
WP_011888780.1\|1124030_1125002_-	Abi family protein	A0A059NT88	Lactococcus_phage	3.3e-75	42.3
WP_138098457.1\|1125311_1126529_-	glucosaminidase domain-containing protein	A0A1P8VVM5	Streptococcus_phage	1.1e-165	60.3
WP_138098459.1\|1126642_1126828_-	hypothetical protein	Q938J5	Temperate_phage	2.5e-24	95.1
WP_136261349.1\|1126824_1127121_-	hypothetical protein	Q938J6	Temperate_phage	1.7e-46	98.0
WP_138098461.1\|1127130_1127748_-	DUF1366 domain-containing protein	Q938J7	Temperate_phage	1.7e-77	87.8
WP_138098463.1\|1127750_1128179_-	DUF1617 family protein	Q938J8	Temperate_phage	2.5e-59	85.7
WP_138098465.1\|1128188_1130150_-	gp58-like family protein	Q938J9	Temperate_phage	1.0e-102	55.4
WP_138098467.1\|1130160_1130766_-	hypothetical protein	A3F658	Streptococcus_phage	1.2e-78	72.9
WP_138098469.1\|1130765_1131587_-	collagen-like protein	A3F657	Streptococcus_phage	8.6e-16	69.4
WP_138098471.1\|1131583_1133728_-\|tail	phage tail protein	Q938K1	Temperate_phage	0.0e+00	89.6
WP_138098473.1\|1133724_1134441_-\|tail	phage tail family protein	Q938K2	Temperate_phage	1.2e-127	92.0
WP_138098475.1\|1134437_1137698_-	tape measure protein	Q938K3	Temperate_phage	0.0e+00	97.4
WP_111679819.1\|1137687_1138269_-	hypothetical protein	Q938K4	Temperate_phage	5.6e-78	72.0
WP_111711582.1\|1138277_1138712_-	hypothetical protein	Q938K5	Temperate_phage	2.5e-51	75.0
WP_138098477.1\|1138757_1139243_-\|tail	phage tail protein	Q938K6	Temperate_phage	9.4e-71	84.4
WP_111679816.1\|1139242_1139641_-\|capsid	capsid protein	Q79S87	Temperate_phage	3.0e-67	96.2
WP_138098479.1\|1139637_1139994_-\|capsid	capsid protein	Q79S88	Temperate_phage	4.6e-59	95.8
WP_111679814.1\|1139993_1140326_-\|capsid	minor capsid protein	Q79S86	Temperate_phage	2.6e-56	94.5
WP_111679813.1\|1140315_1140732_-	hypothetical protein	Q938K7	Temperate_phage	1.1e-51	89.2
WP_111679812.1\|1140785_1141604_-\|capsid	N4-gp56 family major capsid protein	Q79S85	Temperate_phage	1.5e-140	96.0
WP_111679811.1\|1141607_1142222_-	hypothetical protein	Q938K8	Temperate_phage	1.8e-87	92.6
WP_111679810.1\|1142352_1142619_-	hypothetical protein	A0A097PAR8	Streptococcus_pyogenes_phage	2.7e-35	87.5
WP_111679809.1\|1142692_1142920_-	hypothetical protein	NA	NA	NA	NA
WP_111679808.1\|1142916_1144413_-\|capsid	phage minor capsid protein	Q938L1	Temperate_phage	1.0e-208	78.0
WP_138098481.1\|1144417_1145920_-\|portal	phage portal protein	Q938L2	Temperate_phage	1.4e-269	95.4
WP_138098483.1\|1145933_1147145_-\|terminase	PBSX family phage terminase large subunit	Q938L3	Temperate_phage	1.8e-219	96.8
WP_138098485.1\|1147221_1147704_-\|terminase	terminase	A0A1S5SA53	Streptococcus_phage	1.4e-58	73.5
WP_081281265.1\|1147767_1148640_-	hypothetical protein	NA	NA	NA	NA
WP_138098487.1\|1148728_1148920_+	hypothetical protein	NA	NA	NA	NA
WP_002987622.1\|1149575_1150013_-	DUF1492 domain-containing protein	A0A097PBF1	Streptococcus_pyogenes_phage	1.0e-76	99.3
WP_138098492.1\|1150376_1150568_-	hypothetical protein	NA	NA	NA	NA
WP_100206411.1\|1150623_1151313_-	site-specific DNA-methyltransferase	A3F629	Streptococcus_phage	9.5e-117	84.8
WP_138098494.1\|1151312_1151900_-	class I SAM-dependent methyltransferase	A0A060AGD9	Listeria_phage	4.2e-49	51.6
WP_138098496.1\|1151903_1152188_-	hypothetical protein	A3F628	Streptococcus_phage	5.0e-40	93.6
WP_136019527.1\|1152197_1152467_-	hypothetical protein	Q938M2	Temperate_phage	2.4e-44	92.1
WP_011054755.1\|1152463_1152748_-	DUF3310 domain-containing protein	Q938M3	Temperate_phage	5.4e-50	100.0
WP_011054756.1\|1152741_1152993_-	hypothetical protein	Q938M4	Temperate_phage	6.8e-41	100.0
WP_138098497.1\|1152989_1153346_-	hypothetical protein	A0A1P8VVP9	Streptococcus_phage	3.6e-59	96.6
WP_011054576.1\|1153329_1153650_-	VRR-NUC domain-containing protein	A0A1P8VVL5	Streptococcus_phage	7.1e-51	94.3
WP_008087509.1\|1153646_1154060_-	hypothetical protein	A0A2H4JHE6	uncultured_Caudovirales_phage	2.8e-15	50.0
WP_021733182.1\|1154321_1155797_-	nucleoside triphosphatase	A0A1P8VVM0	Streptococcus_phage	5.5e-247	86.3
WP_138098499.1\|1155786_1156599_-	bifunctional DNA primase/polymerase	A0A1P8VVM6	Streptococcus_phage	3.6e-155	98.9
WP_136295056.1\|1156601_1157060_-	DUF669 domain-containing protein	A0A1P8VVN0	Streptococcus_phage	3.3e-81	99.3
WP_011528546.1\|1157075_1158305_-	DEAD/DEAH box helicase	A0A1P8VVM2	Streptococcus_phage	3.3e-237	100.0
WP_002995975.1\|1158406_1159087_-	AAA family ATPase	A0A1P8VVS4	Streptococcus_phage	1.6e-129	100.0
WP_011054820.1\|1159087_1159570_-	siphovirus Gp157 family protein	A0A1P8VVS5	Streptococcus_phage	4.6e-78	99.4
WP_023610888.1\|1159798_1160113_-	helix-turn-helix transcriptional regulator	A0A1P8VVN6	Streptococcus_phage	2.7e-50	95.2
WP_002986282.1\|1160998_1161214_-	hypothetical protein	M1Q1B4	Streptococcus_phage	2.2e-24	78.6
WP_111681767.1\|1161521_1161872_+	helix-turn-helix transcriptional regulator	C5J980	Streptococcus_phage	1.1e-33	62.6
WP_138098501.1\|1161874_1162261_+	ImmA/IrrE family metallo-endopeptidase	A7J268	Streptococcus_phage	7.6e-39	69.8
WP_012767059.1\|1162271_1162694_+	hypothetical protein	NA	NA	NA	NA
WP_050742413.1\|1162906_1163173_+	hypothetical protein	M1PF81	Streptococcus_phage	9.6e-09	87.1
WP_138098503.1\|1163296_1164385_+\|integrase	site-specific integrase	A0A097PAS9	Streptococcus_pyogenes_phage	2.3e-202	98.6
WP_003060624.1\|1164747_1165368_+	DUF3862 domain-containing protein	NA	NA	NA	NA
1164428:1164539	attR	NA	NA	NA	NA
WP_003057625.1\|1167229_1168435_-	30S ribosomal protein S1	NA	NA	NA	NA
WP_003057631.1\|1168823_1169054_-	DUF2969 domain-containing protein	NA	NA	NA	NA
WP_015057616.1\|1169117_1170140_-	branched-chain amino acid aminotransferase	NA	NA	NA	NA
WP_138098505.1\|1170261_1172721_-	DNA topoisomerase IV subunit A	G3M9Z5	Bacillus_virus	1.3e-94	32.6
WP_003057638.1\|1172917_1173736_-	hypothetical protein	NA	NA	NA	NA
WP_003059704.1\|1173802_1175752_-	DNA topoisomerase IV subunit B	G3M9Z3	Bacillus_virus	1.2e-121	41.7
WP_046177743.1\|1175886_1176528_+	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA
WP_138098507.1\|1176587_1177859_-	dihydroorotase	NA	NA	NA	NA
WP_138098509.1\|1177982_1178636_-	uracil-DNA glycosylase	A0A0N9QWR4	Chrysochromulina_ericina_virus	2.5e-34	39.9
WP_065358514.1\|1179448_1180312_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_003060129.1\|1180430_1181885_-	amidase	NA	NA	NA	NA
WP_138098511.1\|1182063_1183412_-\|transposase	IS3 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	8.8e-50	52.2
WP_003053721.1\|1183482_1184229_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_003060988.1\|1184269_1184899_-	orotate phosphoribosyltransferase	Q58MW1	Prochlorococcus_phage	1.4e-05	34.1
WP_003053723.1\|1184959_1185652_-	orotidine-5'-phosphate decarboxylase	NA	NA	NA	NA
WP_012767079.1\|1185863_1186412_-	hypothetical protein	NA	NA	NA	NA
WP_003053703.1\|1186635_1187553_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_138098513.1\|1187634_1188405_-	LytR family transcriptional regulator	NA	NA	NA	NA
WP_003053699.1\|1188397_1189111_-	purine-nucleoside phosphorylase	NA	NA	NA	NA
WP_003053715.1\|1189663_1190473_-	purine-nucleoside phosphorylase	Q5YBA4	Grouper_iridovirus	8.7e-53	42.2
WP_022554718.1\|1190456_1190897_-	arsenate reductase (glutaredoxin)	A0A2H4J8T1	uncultured_Caudovirales_phage	1.3e-34	54.5
WP_049519365.1\|1190915_1192127_-	phosphopentomutase	NA	NA	NA	NA
WP_003060751.1\|1192205_1192889_-	ribose-5-phosphate isomerase RpiA	NA	NA	NA	NA
WP_138098515.1\|1193030_1194407_+\|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE	NA	NA	NA	NA

DBSCAN-SWA_7

1403895 : 1517341

106

Streptococcus_phage(86.21%)

protease,tail,transposase,terminase,capsid,portal,tRNA,holin,head

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_138098572.1\|1403895_1405001_-\|transposase	IS3 family transposase	A0A2I7SC85	Paenibacillus_phage	3.7e-70	49.3
WP_012767229.1\|1405436_1405739_-	hypothetical protein	NA	NA	NA	NA
WP_041789063.1\|1405962_1407138_-\|transposase	IS256-like element ISSdy3 family transposase	A0A0N9STL0	Staphylococcus_phage	9.4e-32	33.2
WP_012767231.1\|1407410_1407650_-	SemiSWEET transporter	NA	NA	NA	NA
WP_138098574.1\|1407666_1409106_-	6-phospho-beta-glucosidase	NA	NA	NA	NA
WP_138083933.1\|1409207_1410140_-	BMP family protein	NA	NA	NA	NA
WP_012767234.1\|1410333_1410756_+	SIS domain-containing protein	NA	NA	NA	NA
WP_138083934.1\|1410785_1410899_-	HAD hydrolase family protein	NA	NA	NA	NA
WP_080504469.1\|1410902_1410962_-	HAD hydrolase family protein	NA	NA	NA	NA
WP_138098576.1\|1412906_1414352_-	glycoside hydrolase family 1 protein	NA	NA	NA	NA
WP_012767238.1\|1414497_1415427_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_138098578.1\|1415501_1417415_-	PTS glucose transporter subunit IIA	NA	NA	NA	NA
WP_138083938.1\|1417654_1418509_-	PRD domain-containing protein	NA	NA	NA	NA
WP_138083939.1\|1420202_1421489_-	polysaccharide deacetylase family protein	NA	NA	NA	NA
WP_014612419.1\|1421574_1423002_-	NADP-dependent glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_065361232.1\|1423168_1424902_-	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA
WP_002984031.1\|1424906_1425170_-	phosphocarrier protein HPr	NA	NA	NA	NA
WP_003051493.1\|1425554_1425773_+	redoxin NrdH	A0A249XUR7	Enterococcus_phage	6.2e-14	50.7
WP_138098580.1\|1425792_1427952_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	A8E2R1	Enterococcus_phage	7.0e-259	62.5
WP_003054109.1\|1428542_1429502_+	class 1b ribonucleoside-diphosphate reductase subunit beta	A0A096XT60	Enterococcus_phage	2.6e-128	70.5
WP_084916506.1\|1429479_1430838_+	chloride channel protein	NA	NA	NA	NA
WP_022554917.1\|1430872_1431568_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_138083941.1\|1431586_1432348_-	DUF3169 family protein	NA	NA	NA	NA
WP_003054097.1\|1432344_1432560_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_049519964.1\|1432559_1433114_-	DUF3267 domain-containing protein	NA	NA	NA	NA
WP_138083942.1\|1433273_1435892_-\|tRNA	alanine--tRNA ligase	A0A1V0SK38	Klosneuvirus	4.6e-63	34.8
WP_138083943.1\|1435907_1436393_-	LURP-one-related family protein	NA	NA	NA	NA
WP_003060949.1\|1436647_1437715_-	peptidylprolyl isomerase PrsA	NA	NA	NA	NA
WP_015057801.1\|1437777_1438485_-	O-methyltransferase	NA	NA	NA	NA
WP_015017194.1\|1438536_1439748_-	OFA family MFS transporter	NA	NA	NA	NA
WP_138083944.1\|1440080_1440704_-	HAD-IA family hydrolase	NA	NA	NA	NA
WP_138098582.1\|1440703_1441246_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_014612427.1\|1441375_1441924_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
WP_003060489.1\|1442108_1443911_-	oligoendopeptidase F	NA	NA	NA	NA
WP_172600563.1\|1443921_1444884_-	competence protein CoiA	NA	NA	NA	NA
WP_015017197.1\|1444995_1446156_-	MFS transporter	NA	NA	NA	NA
WP_003060776.1\|1446247_1446964_-	rRNA pseudouridine synthase	NA	NA	NA	NA
WP_003056370.1\|1447067_1447781_-	glucosamine-6-phosphate deaminase	NA	NA	NA	NA
WP_022554929.1\|1447979_1449008_+\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
WP_015017200.1\|1449012_1450233_+	DUF3114 domain-containing protein	NA	NA	NA	NA
WP_046166020.1\|1450353_1451415_-	serine hydrolase	NA	NA	NA	NA
WP_014612432.1\|1451581_1452187_-	superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	5.1e-58	52.7
WP_015017201.1\|1452276_1453323_-	DNA polymerase III subunit delta	NA	NA	NA	NA
WP_080568636.1\|1453403_1453985_-	MBL fold metallo-hydrolase	M1PSD2	Streptococcus_phage	5.4e-57	59.8
WP_014293908.1\|1454284_1454623_-	Cd(II)/Zn(II)-sensing metalloregulatory transcriptional regulator CadX	E4ZFI8	Streptococcus_phage	6.5e-10	33.3
WP_138098583.1\|1454634_1455261_-	CadD family cadmium resistance transporter	NA	NA	NA	NA
WP_138098585.1\|1455322_1456885_-	recombinase family protein	Q6DMS5	Streptococcus_phage	2.0e-215	72.1
WP_138098587.1\|1456884_1458120_-	recombinase family protein	M1NSJ1	Streptococcus_phage	1.9e-229	95.6
WP_172600599.1\|1458177_1458339_-	hypothetical protein	M1PSL4	Streptococcus_phage	5.2e-18	86.8
WP_138098589.1\|1458445_1459915_-	N-acetylmuramoyl-L-alanine amidase	A0A1X9I678	Streptococcus_phage	3.4e-257	90.6
WP_138098591.1\|1459916_1460321_-\|holin	phage holin family protein	D0R0E9	Streptococcus_phage	3.0e-46	75.6
WP_138098593.1\|1460338_1462195_-	hypothetical protein	Q6DMS9	Streptococcus_phage	1.1e-257	73.4
WP_138098595.1\|1462207_1465123_-\|tail	phage tail protein	Q6DMT0	Streptococcus_phage	0.0e+00	64.3
WP_046391408.1\|1465122_1465848_-\|tail	phage tail protein	M1Q107	Streptococcus_phage	4.7e-82	59.8
WP_138098597.1\|1465844_1468703_-\|tail	phage tail tape measure protein	D0R0E3	Streptococcus_phage	8.8e-217	93.6
WP_138098599.1\|1468885_1469305_-	hypothetical protein	D0R0E2	Streptococcus_phage	4.8e-71	99.3
WP_003054960.1\|1469316_1469886_-	hypothetical protein	E4ZFM9	Streptococcus_phage	2.2e-103	98.9
WP_003054958.1\|1469887_1470214_-	hypothetical protein	E4ZFM8	Streptococcus_phage	3.4e-56	99.1
WP_003054952.1\|1470220_1470589_-	hypothetical protein	A0A1X9I688	Streptococcus_phage	2.2e-48	91.0
WP_003054988.1\|1470581_1470920_-\|head,tail	head-tail adaptor protein	A0A1X9I694	Streptococcus_phage	1.7e-58	99.1
WP_138098602.1\|1470919_1471177_-\|head,tail	phage gp6-like head-tail connector protein	A0A1X9I695	Streptococcus_phage	6.6e-39	95.3
WP_138098604.1\|1471179_1472385_-\|capsid	phage major capsid protein	A0A1X9I692	Streptococcus_phage	1.2e-228	99.3
WP_121792009.1\|1472403_1473099_-\|protease	Clp protease ClpP	A0A1B0RXJ9	Streptococcus_phage	1.4e-115	90.0
WP_121792008.1\|1473091_1474375_-\|portal	phage portal protein	A0A1B0RXD8	Streptococcus_phage	6.3e-223	88.3
WP_138098606.1\|1474455_1474752_-	hypothetical protein	NA	NA	NA	NA
WP_138098608.1\|1475070_1476663_-\|terminase	terminase large subunit	A0A1B0RXJ8	Streptococcus_phage	2.1e-292	90.4
WP_058622028.1\|1476659_1477133_-\|terminase	phage terminase small subunit P27 family	A0A1B0RXG3	Streptococcus_phage	2.3e-82	94.3
WP_138098610.1\|1477195_1477405_-	DUF4314 domain-containing protein	A0A1B0RXD4	Streptococcus_phage	9.8e-17	63.8
WP_015057826.1\|1477408_1477663_-	hypothetical protein	M1PG57	Streptococcus_phage	1.5e-19	59.5
WP_121792006.1\|1477734_1478991_-	DNA (cytosine-5-)-methyltransferase	M1NSK8	Streptococcus_phage	1.1e-222	89.0
WP_138098612.1\|1478987_1480244_-	DNA modification methylase	A0A1B0RXE5	Streptococcus_phage	1.4e-211	86.3
WP_121792005.1\|1480961_1481327_-	HNH endonuclease	A0A1B0RXJ3	Streptococcus_phage	2.1e-67	95.0
WP_138098614.1\|1481328_1482366_-	methionine adenosyltransferase	Q6DMV3	Streptococcus_phage	2.1e-184	94.8
WP_014638129.1\|1482413_1482596_-	hypothetical protein	A0A1B0RXC3	Streptococcus_phage	5.9e-26	100.0
WP_138098616.1\|1482684_1482912_-	hypothetical protein	A0A1X9I6K4	Streptococcus_phage	5.6e-34	92.0
WP_138098618.1\|1483096_1483600_-	hypothetical protein	Q6DMV6	Streptococcus_phage	1.4e-85	97.0
WP_138098620.1\|1483592_1484969_-	DEAD/DEAH box helicase	A0A1X9I6B0	Streptococcus_phage	9.0e-260	97.8
WP_138098622.1\|1484949_1485231_-	VRR-NUC domain-containing protein	A0A1B0RXC4	Streptococcus_phage	3.0e-45	97.8
WP_138098624.1\|1485515_1487801_-	primase C-terminal domain-containing protein	A0A1X9I6B6	Streptococcus_phage	0.0e+00	94.6
WP_121792001.1\|1488218_1488542_+	hypothetical protein	M1PSP3	Streptococcus_phage	4.8e-47	93.3
WP_138098626.1\|1488534_1489656_+	DUF2800 domain-containing protein	M1Q218	Streptococcus_phage	1.9e-207	94.1
WP_138098628.1\|1489660_1490209_+	DUF2815 family protein	E4ZFK3	Streptococcus_phage	2.1e-98	99.5
WP_172600600.1\|1490227_1490395_+	hypothetical protein	A0A1X9I6D2	Streptococcus_phage	2.3e-21	96.4
WP_138098630.1\|1490443_1492399_+	DNA polymerase	D0R0B0	Streptococcus_phage	0.0e+00	93.1
WP_138098632.1\|1492438_1493044_-	hypothetical protein	NA	NA	NA	NA
WP_138098634.1\|1493448_1495317_-	ImmA/IrrE family metallo-endopeptidase	E4ZFJ9	Streptococcus_phage	4.8e-296	79.3
WP_138098636.1\|1495407_1495749_+	hypothetical protein	NA	NA	NA	NA
WP_138098638.1\|1496059_1497535_-	LlaJI family restriction endonuclease	NA	NA	NA	NA
WP_138098640.1\|1497549_1499658_-	AAA family ATPase	M1NSM1	Streptococcus_phage	4.0e-41	37.7
WP_138098642.1\|1501112_1501802_+	helix-turn-helix transcriptional regulator	D0R0A5	Streptococcus_phage	7.0e-112	86.9
WP_172600587.1\|1502008_1502149_+	hypothetical protein	Q6DMX3	Streptococcus_phage	1.9e-16	95.7
WP_138098644.1\|1502153_1503569_+	Y-family DNA polymerase	M1Q231	Streptococcus_phage	1.2e-267	97.7
WP_003059257.1\|1503565_1503934_+	hypothetical protein	M1PLN9	Streptococcus_phage	1.1e-60	97.5
WP_003059268.1\|1504002_1504407_-	arsenate reductase ArsC	NA	NA	NA	NA
WP_003059250.1\|1504415_1506146_-	arsenical pump-driving ATPase	NA	NA	NA	NA
WP_115261959.1\|1506158_1506536_-	arsenite efflux transporter metallochaperone ArsD	NA	NA	NA	NA
WP_007556367.1\|1506647_1506929_-	winged helix-turn-helix transcriptional regulator	A0A2H4PQT4	Staphylococcus_phage	3.5e-09	41.2
WP_138098646.1\|1508372_1508687_+	hypothetical protein	E4ZFJ0	Streptococcus_phage	2.0e-50	93.3
WP_115261961.1\|1508996_1511126_-	cadmium-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	0.0e+00	99.6
WP_003057106.1\|1511118_1511487_-	helix-turn-helix transcriptional regulator	E4ZFI8	Streptococcus_phage	3.9e-61	97.5
WP_003057102.1\|1511689_1511857_+	hypothetical protein	E4ZFI7	Streptococcus_phage	3.9e-24	100.0
WP_172600601.1\|1512198_1512855_-	hypothetical protein	Q6DMY1	Streptococcus_phage	6.3e-110	90.4
WP_138098648.1\|1512981_1514667_-	ComEC/Rec2 family competence protein	NA	NA	NA	NA
WP_138098650.1\|1514647_1515310_-	helix-hairpin-helix domain-containing protein	NA	NA	NA	NA
WP_003062277.1\|1515706_1516447_-	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
WP_046159327.1\|1516486_1517341_+\|tRNA	tRNA1(Val) (adenine(37)-N6)-methyltransferase	NA	NA	NA	NA

DBSCAN-SWA_8

1915968 : 1923520

Streptococcus_phage(50.0%)

integrase,transposase

attL 1905565:1905579|attR 1926771:1926785

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1905565:1905579	attL	NA	NA	NA	NA
WP_003060222.1\|1915968_1916190_-	helix-turn-helix transcriptional regulator	U5U3X7	Lactobacillus_phage	9.7e-07	44.1
WP_003056692.1\|1916359_1916734_+	helix-turn-helix transcriptional regulator	A0A097BY95	Leuconostoc_phage	4.2e-18	52.6
WP_022555211.1\|1917554_1918418_+\|transposase	IS982 family transposase	NA	NA	NA	NA
WP_002983018.1\|1918974_1920165_-\|integrase	site-specific integrase	A0A1S5SEW7	Streptococcus_phage	8.4e-137	62.0
WP_002983016.1\|1920240_1920444_-	excisionase	A0A1S5SF07	Streptococcus_phage	2.3e-26	80.6
WP_002983011.1\|1920872_1921124_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_009220377.1\|1921104_1921548_-	sigma-70 family RNA polymerase sigma factor	A0A1S5SEW0	Streptococcus_phage	3.3e-14	34.5
WP_002983007.1\|1922053_1923520_-	energy-coupling factor ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.4e-15	29.3
1926771:1926785	attR	NA	NA	NA	NA

DBSCAN-SWA_9

2001805 : 2071754

Bacillus_phage(30.0%)

holin,protease,transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_138084052.1\|2001805_2002480_-\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_022555174.1\|2002476_2003004_-	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA
WP_138098752.1\|2003544_2005236_-	fibronectin binding protein	NA	NA	NA	NA
WP_138098754.1\|2005667_2007173_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_138098756.1\|2009990_2010488_-	hypothetical protein	NA	NA	NA	NA
WP_138083753.1\|2010754_2012103_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	5.5e-60	49.3
WP_011888573.1\|2012186_2013536_-	glucose-6-phosphate isomerase	NA	NA	NA	NA
WP_138098758.1\|2013775_2014357_-	TlpA family protein disulfide reductase	NA	NA	NA	NA
WP_012767582.1\|2014471_2015092_-	hypothetical protein	NA	NA	NA	NA
WP_022555184.1\|2015579_2019188_-	pyruvate:ferredoxin (flavodoxin) oxidoreductase	NA	NA	NA	NA
WP_003055452.1\|2019311_2019590_-	ethanolamine utilization microcompartment protein EutM	NA	NA	NA	NA
WP_014612600.1\|2019613_2019889_-	ethanolamine utilization microcompartment protein EutM	NA	NA	NA	NA
WP_014612600.1\|2019912_2020188_-	ethanolamine utilization microcompartment protein EutM	NA	NA	NA	NA
WP_003055447.1\|2020201_2020897_-	phosphate propanoyltransferase	NA	NA	NA	NA
WP_003055472.1\|2020906_2022565_-	acetaldehyde dehydrogenase (acetylating)	A0A1X9I5D4	Streptococcus_phage	6.2e-05	27.7
WP_022555187.1\|2022588_2023194_-	BMC domain-containing protein	NA	NA	NA	NA
WP_065354922.1\|2023209_2023842_-	cupin domain-containing protein	NA	NA	NA	NA
WP_003055449.1\|2023857_2024154_-	EutN/CcmL family microcompartment protein	NA	NA	NA	NA
WP_138084058.1\|2024165_2025008_-	ethanolamine utilization protein EutJ	NA	NA	NA	NA
WP_014612602.1\|2024994_2025627_-	hypothetical protein	NA	NA	NA	NA
WP_003055460.1\|2025710_2026841_-	iron-containing alcohol dehydrogenase	NA	NA	NA	NA
WP_014612603.1\|2026837_2027284_-	EutP/PduV family GTP-binding protein	NA	NA	NA	NA
WP_003055479.1\|2027280_2027628_-	BMC domain-containing protein	NA	NA	NA	NA
WP_138084059.1\|2027640_2028630_-\|holin	choline TMA-lyase-activating enzyme	NA	NA	NA	NA
WP_138084060.1\|2028691_2031238_-\|holin	choline trimethylamine-lyase	Q70BG9	Salmonella_phage	6.6e-06	38.7
WP_022555192.1\|2031298_2032654_-	aldehyde dehydrogenase family protein	NA	NA	NA	NA
WP_003053467.1\|2032669_2032978_-	BMC domain-containing protein	NA	NA	NA	NA
WP_003053490.1\|2032989_2033289_-	BMC domain-containing protein	NA	NA	NA	NA
WP_003053465.1\|2033303_2033588_-	hypothetical protein	NA	NA	NA	NA
WP_003053492.1\|2033591_2034599_-	DMT family transporter	NA	NA	NA	NA
WP_022555193.1\|2034632_2034920_-	ethanolamine utilization microcompartment protein EutM	NA	NA	NA	NA
WP_044565536.1\|2035431_2036307_-	MerR family transcriptional regulator	NA	NA	NA	NA
WP_022555195.1\|2037541_2037793_-	hypothetical protein	NA	NA	NA	NA
WP_022555196.1\|2037847_2039068_+	peptidoglycan endo-beta-N-acetylglucosaminidase	NA	NA	NA	NA
WP_138084062.1\|2039169_2039697_-	nucleoside deaminase	NA	NA	NA	NA
WP_003053477.1\|2039696_2040476_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_003053494.1\|2040615_2041155_-	biotin transporter BioY	NA	NA	NA	NA
WP_081281257.1\|2041158_2041470_-	hypothetical protein	NA	NA	NA	NA
WP_012767590.1\|2041674_2042817_-\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	1.7e-86	43.9
WP_003061926.1\|2043036_2043903_+	DUF975 family protein	NA	NA	NA	NA
WP_012767592.1\|2044023_2044491_-	peroxide-responsive transcriptional repressor PerR	NA	NA	NA	NA
WP_003055717.1\|2044557_2044998_-	CoA-binding protein	NA	NA	NA	NA
WP_138084063.1\|2045204_2047847_-	DNA polymerase I	S5M8J1	Bacillus_phage	7.0e-51	34.7
WP_015017457.1\|2047993_2049721_-	ABC transporter permease/substrate binding protein	NA	NA	NA	NA
WP_003055694.1\|2049738_2050935_-	glycine betaine/L-proline ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.5e-29	38.7
WP_003055714.1\|2051365_2052277_-	diacylglycerol kinase family lipid kinase	A0A1V0SBJ0	Catovirus	1.8e-14	25.7
WP_003052974.1\|2052489_2053581_-	L-ascorbate 6-phosphate lactonase	NA	NA	NA	NA
WP_003055705.1\|2053877_2055524_-	transcription antiterminator	NA	NA	NA	NA
WP_012767596.1\|2055806_2056523_-	L-ribulose-5-phosphate 4-epimerase	NA	NA	NA	NA
WP_065358691.1\|2056524_2057388_-	L-ribulose-5-phosphate 3-epimerase	NA	NA	NA	NA
WP_003055711.1\|2057391_2058054_-	3-keto-L-gulonate-6-phosphate decarboxylase UlaD	NA	NA	NA	NA
WP_015017460.1\|2058162_2058648_-	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_065361102.1\|2058770_2059049_-	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_003055713.1\|2059119_2060553_-	PTS sugar transporter subunit IIC	NA	NA	NA	NA
WP_138084064.1\|2060857_2063359_-\|tRNA	leucine--tRNA ligase	A0A2H4PQS0	Staphylococcus_phage	0.0e+00	65.7
WP_138084065.1\|2064435_2065386_+\|transposase	IS30 family transposase	Q9MBM9	Staphylococcus_prophage	5.6e-35	33.1
WP_014612618.1\|2066553_2066871_-	hypothetical protein	NA	NA	NA	NA
WP_138098760.1\|2067413_2069048_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.3e-26	25.7
WP_138084067.1\|2069032_2070016_-	ThiF family adenylyltransferase	NA	NA	NA	NA
WP_022555211.1\|2070890_2071754_-\|transposase	IS982 family transposase	NA	NA	NA	NA

DBSCAN-SWA_10

2140458 : 2151958

Streptococcus_phage(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_046177147.1\|2140458_2143014_-	DNA mismatch repair protein MutS	A0A1V0SGG8	Hokovirus	2.7e-39	25.5
WP_003062220.1\|2143000_2143354_-	YlbF family regulator	NA	NA	NA	NA
WP_138084084.1\|2143350_2143788_-	arginine repressor	NA	NA	NA	NA
WP_015017500.1\|2144076_2145768_+\|tRNA	arginine--tRNA ligase	A0A2I2L3K1	Orpheovirus	6.4e-74	32.4
WP_014612639.1\|2145837_2147235_-	ABC-F family ATP-binding cassette domain-containing protein	A0A1B0RXA0	Streptococcus_phage	6.5e-48	28.3
WP_003055540.1\|2147411_2148326_-	YitT family protein	M1Q1P6	Streptococcus_phage	2.0e-53	40.1
WP_138098776.1\|2148355_2149255_-	YitT family protein	M1Q1P6	Streptococcus_phage	4.6e-47	35.2
WP_003055524.1\|2149275_2150217_-	YitT family protein	NA	NA	NA	NA
WP_003055520.1\|2150209_2151958_-\|tRNA	aspartate--tRNA ligase	A0A1V0SJ84	Klosneuvirus	4.5e-14	26.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_LR594034

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection