CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_LS483354	Streptococcus equi subsp. zooepidemicus strain NCTC11606 chromosome 1	6 crisprs	DEDDh,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,DinG,csm6,csn2,cas9	1	21	5	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_LS483354_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LS483354_1

398370-398431

Orphan

Consensus_repeat	Method
TCTGGCTTAGGCTCTGGCTTAGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LS483354_1

>merge|NZ_LS483354|1|398370-398431|CRISPRCasFinder
CCTGGTTTAGTCATTGATTTAGGTTGTTCTGGCTTAGGCTCTGGCTTAGGCTCTGGCTTAGG

>NZ_LS483354|1|1|398370-398431|CRISPRCasFinder
CCTGGTTTAGTCATTGATTTAGG	TTGTTCTGGCTTAGGC
TCTGGCTTAGGCTCTGGCTTAGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LS483354.1\|WP_002983142.1\|403436_403676_+\|30S-ribosomal-protein-S18	unknown	unknown	gnl\|CDD\|178997
NZ_LS483354.1\|WP_111721637.1\|387714_388200_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LS483354.1\|WP_012514997.1\|402480_402771_+\|30S-ribosomal-protein-S6	unknown	unknown	gnl\|CDD\|179034
NZ_LS483354.1\|WP_012514998.1\|402789_403278_+\|single-stranded-DNA-binding-protein	unknown	unknown	gnl\|CDD\|180915
NZ_LS483354.1\|WP_041785270.1\|399378_399663_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LS483354.1\|WP_041785265.1\|391547_392456_-\|ribonuclease-HIII	unknown	unknown	gnl\|CDD\|234886
NZ_LS483354.1\|WP_012514987.1\|392573_392885_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LS483354.1\|WP_012514985.1\|390923_391523_-\|signal-peptidase-I	unknown	unknown	gnl\|CDD\|274044
NZ_LS483354.1\|WP_041785274.1\|410756_411833_+\|aminopeptidase-P-family-protein	unknown	unknown	gnl\|CDD\|223085
NZ_LS483354.1\|WP_012514989.1\|393502_395839_+\|endonuclease-MutS2	unknown	unknown	gnl\|CDD\|234750
NZ_LS483354.1\|WP_041785269.1\|396181_397501_-\|FAD-containing-oxidoreductase	unknown	unknown	gnl\|CDD\|180907
NZ_LS483354.1\|WP_012515001.1\|407335_410158_+\|excinuclease-ABC-subunit-UvrA	unknown	unknown	gnl\|CDD\|234734
NZ_LS483354.1\|WP_012514999.1\|405368_406019_-\|DUF1129-domain-containing-protein	unknown	unknown	gnl\|CDD\|227195
NZ_LS483354.1\|WP_012514994.1\|399954_401103_-\|A/G-specific-adenine-glycosylase	unknown	unknown	gnl\|CDD\|224115
NZ_LS483354.1\|WP_041785843.1\|388295_390695_-\|ATP-dependent-RecD-like-DNA-helicase	unknown	unknown	gnl\|CDD\|273632
NZ_LS483354.1\|WP_012515000.1\|406195_407140_-\|magnesium-transporter-CorA-family-protein	unknown	unknown	gnl\|CDD\|213361
NZ_LS483354.1\|WP_041785266.1\|392884_393430_+\|CvpA-family-protein	unknown	unknown	gnl\|CDD\|224205
NZ_LS483354.1\|WP_012514982.1\|386469_387573_+\|DNA-polymerase-IV	unknown	unknown	gnl\|CDD\|235035
NZ_LS483354.1\|WP_165626751.1\|403876_405219_+\|IS3-like-element-ISSeq3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_LS483354.1\|WP_012514992.1\|397679_397994_+\|thioredoxin	unknown	unknown	gnl\|CDD\|200072

Protein	Function_ID	Function_description	E-value
NZ_LS483354.1\|WP_002983142.1\|403436_403676_+\|30S-ribosomal-protein-S18	gnl\|CDD\|178997	PRK00391, rpsR, 30S ribosomal protein S18; Reviewed.	1.87037e-37
NZ_LS483354.1\|WP_012515001.1\|407335_410158_+\|excinuclease-ABC-subunit-UvrA	gnl\|CDD\|234734	PRK00349, uvrA, excinuclease ABC subunit UvrA.	0
NZ_LS483354.1\|WP_012514997.1\|402480_402771_+\|30S-ribosomal-protein-S6	gnl\|CDD\|179034	PRK00453, rpsF, 30S ribosomal protein S6; Reviewed.	1.08961e-39
NZ_LS483354.1\|WP_012514999.1\|405368_406019_-\|DUF1129-domain-containing-protein	gnl\|CDD\|227195	COG4858, COG4858, Uncharacterized membrane-bound protein conserved in bacteria [Function unknown].	1.1878e-105
NZ_LS483354.1\|WP_012514998.1\|402789_403278_+\|single-stranded-DNA-binding-protein	gnl\|CDD\|180915	PRK07275, PRK07275, single-stranded DNA-binding protein; Provisional.	6.04311e-114
NZ_LS483354.1\|WP_041785265.1\|391547_392456_-\|ribonuclease-HIII	gnl\|CDD\|234886	PRK00996, PRK00996, ribonuclease HIII; Provisional.	3.10386e-149
NZ_LS483354.1\|WP_012514985.1\|390923_391523_-\|signal-peptidase-I	gnl\|CDD\|274044	TIGR02227, Inactive_signal_peptidase_IA., signal peptidase I, bacterial type. This model represents signal peptidase I from most bacteria. Eukaryotic sequences are likely organellar. Several bacteria have multiple paralogs, but these represent isozymes of signal peptidase I. Virtually all known bacteria may be presumed to A related model finds a simlar protein in many archaea and a few bacteria, as well as a microsomal (endoplasmic reticulum) protein in eukaryotes. [Protein fate, Protein and peptide secretion and trafficking].	9.11343e-36
NZ_LS483354.1\|WP_041785274.1\|410756_411833_+\|aminopeptidase-P-family-protein	gnl\|CDD\|223085	COG0006, PepP, Xaa-Pro aminopeptidase [Amino acid transport and metabolism].	7.02275e-115
NZ_LS483354.1\|WP_012514989.1\|393502_395839_+\|endonuclease-MutS2	gnl\|CDD\|234750	PRK00409, PRK00409, recombination and DNA strand exchange inhibitor protein; Reviewed.	0
NZ_LS483354.1\|WP_041785269.1\|396181_397501_-\|FAD-containing-oxidoreductase	gnl\|CDD\|180907	PRK07251, PRK07251, FAD-containing oxidoreductase.	0
NZ_LS483354.1\|WP_012514994.1\|399954_401103_-\|A/G-specific-adenine-glycosylase	gnl\|CDD\|224115	COG1194, MutY, A/G-specific DNA glycosylase [DNA replication, recombination, and repair].	6.08696e-152
NZ_LS483354.1\|WP_041785843.1\|388295_390695_-\|ATP-dependent-RecD-like-DNA-helicase	gnl\|CDD\|273632	TIGR01448, recD_rel, helicase, putative, RecD/TraA family. This model describes a family similar to RecD, the exodeoxyribonuclease V alpha chain of TIGR01447. Members of this family, however, are not found in a context of RecB and RecC and are longer by about 200 amino acids at the amino end. Chlamydia muridarum has both a member of this family and a RecD. [Unknown function, Enzymes of unknown specificity].	0
NZ_LS483354.1\|WP_012515000.1\|406195_407140_-\|magnesium-transporter-CorA-family-protein	gnl\|CDD\|213361	cd12827, EcCorA_ZntB-like_u2, uncharacterized bacterial subfamily of the Escherichia coli CorA-Salmonella typhimurium ZntB family. A uncharacterized subfamily of the Escherichia coli CorA-Salmonella typhimurium ZntB (EcCorA-ZntB_like) family of the MIT superfamily of essential membrane proteins involved in transporting divalent cations (uptake or efflux) across membranes.The EcCorA-ZntB-like family includes the Mg2+ transporters Escherichia coli and Salmonella typhimurium CorAs, which can also transport Co2+, and Ni2+. Structures of the intracellular domain of EcCorA-ZntB-like family members, Vibrio parahaemolyticus and Salmonella typhimurium ZntB, form funnel-shaped homopentamers, the tip of the funnel is formed from two C-terminal transmembrane (TM) helices from each monomer, and the large opening of the funnel from the N-terminal cytoplasmic domains. The GMN signature motif of the MIT superfamily occurs just after TM1, mutation within this motif is known to abolish Mg2+ transport through Salmonella typhimurium CorA. Natural variants such as GVN and GIN, such as occur in some ZntB family proteins, may be associated with the transport of different divalent cations, such as zinc and cadmium. The functional diversity of MIT transporters may also be due to minor structural differences regulating gating, substrate selection, and transport.	7.84692e-105
NZ_LS483354.1\|WP_041785266.1\|392884_393430_+\|CvpA-family-protein	gnl\|CDD\|224205	COG1286, CvpA, Uncharacterized membrane protein, required for colicin V production [General function prediction only].	6.77875e-22
NZ_LS483354.1\|WP_012514982.1\|386469_387573_+\|DNA-polymerase-IV	gnl\|CDD\|235035	PRK02406, PRK02406, DNA polymerase IV; Validated.	0
NZ_LS483354.1\|WP_165626751.1\|403876_405219_+\|IS3-like-element-ISSeq3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	1.42697e-50
NZ_LS483354.1\|WP_012514992.1\|397679_397994_+\|thioredoxin	gnl\|CDD\|200072	TIGR01068, Thioredoxin-like_protein_slr0233, thioredoxin. Several proteins, such as protein disulfide isomerase, have two or more copies of a domain closely related to thioredoxin. This model is designed to recognize authentic thioredoxin, a small protein that should be hit exactly once by this model. Any protein that hits once with a score greater than the second (per domain) trusted cutoff may be taken as thioredoxin. [Energy metabolism, Electron transport].	3.80033e-38

>NZ_LS483354.1|WP_012514992.1|397679_397994_+|thioredoxin
MAHIVTDATFEAETNEGLVLVDFWATWCGPCLMQAPILDQLAAEIDEAELKIVKLDVDDNPNTAQQFGIMSIPTLLFKKDGKVVKQVAGVHTKDQIKAIVAELS
>NZ_LS483354.1|WP_041785269.1|396181_397501_-|FAD-containing-oxidoreductase
MEAYELIVIGFGKAGKTLAAKMAQLGKRVALIEQSPTMYGGTCINIGCIPTKALITAAEHNASFADAMAHKDTVVHRLRQKNEQLLAQSGVTLYNGKASFVSNKTIQVEAGQEQILLEGKHIVINTGAVSNRFPIPGLADSQHVVDSTGILALTEQPLRLAIIGAGNIGLEFASLYASLGSEVTMYEAAPAILGRYEPVVAELAQDYLEKAGVTFKLSATVELIANDEAGRVLVTANGKTEAFDCLLYAMGRKPATQGLGLENTDIKLDDRYAVVVDDYCQTTVEGVYAVGDVNGGPQFTYTSLDDFRIVFGQLTGTSQYNHKDRGYLPTTVFIEPPLSQIGLTEKEAKEQGLPYKANELLVANMPRAHVNNDLRGIFKVIVNTETNEILGATLFANNSHEYINLIKMAMDNQIPYTYLKNQLFTHPSMAENLNDVFNL
>NZ_LS483354.1|WP_012514989.1|393502_395839_+|endonuclease-MutS2
MEKKILEQLEFEKVKEQFWPYLQTEQGQLELDLLEPIANKDKIQAYFTELEEMAAIFVEHHHFALGGLSDVSESMQRLDLEADLSIQELLEVKKLLQVSAEACRFYADLENVDLVALKALFEKIESFPSLQGSLQAINDAGFVEGFASPELESIRRQISNKEHASRQLLQDILKKQAAYLSESLIASRNGRSVLPVKNTYRHKVAGVVHDMSASGSTVYIEPRALVSLNEELTQLQTDERHEIGRILHELSEQLRPHSRSLRNNAWLLGHLDLVRAKYLYMQAKQAAVPVISDDKSLQLLNARHPLIQNPVANDLHFANDLAVIVITGPNTGGKTIMLKTLGLAQVMAQSGLPILADKGSRVAVFNGIYADIGDEQSIEQSLSTFSSHMTHIVEILKQADSDSLILFDELGAGTDPQEGASLAMAILEQLRLTNIKTMATTHYPELKAYGIETAYVENASMAFDNVSLKPTYRFMQGVPGRSNAFDIARRLGLAEHIVKEAQAMTATNHDVNRIIEQLEQQTLESRKRLEHIKEVEQDNLKFNRAVKKLYNEFSHAKDKELEKAALEAREIVDMALAESESILSQLHEKAELKPHEIIEAKHRLKQLVPEQSLSQNKVLKKAKKWRAPRVGDDIIVTAYGQRGTLLAQLKDKRWEAQVGLIKLTLKEDEFSLVKLKEEAQQPKKRAVKVVKKAATGKGPRARLDLRGKRYEEAMQELDAFIDQALLNNMSQVDIIHGIGTGVIREAVGKYLRRNKHVKSFGYAPQNAGGSGCTIANLG
>NZ_LS483354.1|WP_041785266.1|392884_393430_+|CvpA-family-protein
MLSVLILLLLSWSFYIGYNRGLILQTFYCFGALMSLLFAHHGYKALAGKLALWVPYSNPAEGAATLFFKDINIFELDKVYYAGIAFFILSTVGYAVVRLAGVLVHLAPVDYFDGFEAKLASGLLAVLVSILFLSMALTILATIPMPFIQGRLHGSLLSRLLVEHCPFISSILRQLWVTAIL
>NZ_LS483354.1|WP_012514987.1|392573_392885_+|hypothetical-protein
MKNINRYKLTFGEKTLTLTTDKDNLFMEEVDRVAKEKYQAIKERLPEADDETVAILMTINTLSAQLSREIEIEKIEAEIVELREKALAGIQEKASQADTDEVS
>NZ_LS483354.1|WP_041785265.1|391547_392456_-|ribonuclease-HIII
MDTLVFKINSQVSSSLIKQLAPYRISNASPYVRLAAKKDGVTLMLYTSGKLVLQGRQAAGLAQELGLQETVADQRPAPSSAQDMPLIGSDEVGNGSYFGGIAVVASFVRPEDHALLRQLGVDDSKNLSDMSIVQIAPVLKKHIQHRALLLSPKKYNEMVGKGKPYNAVSVKVALHNQAIFLLLNDGARPEKIVIDAFTSQANYDKYLQQEKNHFRNPLTFEEKAEGKYLAVAVSSIIARQLFLDNLDKLSQDLGYRLPSGAGRPSDQIASQVLAAYGMAGLEHCAKLHFANTKKAQALLKNQ
>NZ_LS483354.1|WP_012514985.1|390923_391523_-|signal-peptidase-I
MKQFIKEWGAFTLFILLFGLSRLFLWQPVKVDGHSMDPTLAHGERLIIFNKAKIDRFDIVVASEEDENGQRKEIVKRVVGMPGDKLSYRNDTLYINNKKTKEPYLDTYLTSFKKDKLQSTYAYSDLFQELAENAAAFTVNSEGKTEFDITVPKGEYFLLGDDRIVSRDSREVGSFKKQDIVGEVKFRFWPLNKINLFPR
>NZ_LS483354.1|WP_041785843.1|388295_390695_-|ATP-dependent-RecD-like-DNA-helicase
MEHFFTGTVDRIIFDNASNFFKILLLAIEDTDSDFDEADIVITGTMAEIIEGEAYTFWGELTQHPRYGQQLRLSRYQKAKPSSAGLVSYFSSEHFKGIGQKTAEKIIALYGNNPIDDILKNPSRLNEISSLSKANREAFVAKLKANYGTEQVIAALADLGLANRFAFQLFDKYKEEAVHIVKDNPYQLIEDIQGFGFKLADSLAEQLGIESDSPKRFRAALLHCLLEQSIKRGDTYIQARELLALTISLLEDTRPVECDPAIVANQLTQLIDEGKVMTIGTRVFDSSLYYAEDGIQKHLTRLLQQPLTKEPSQDTIDQEIQAIQEEFAITYDKIQKQAISQALTSKVFILTGGPGTGKTTVIRGILQAYASLYQIDLKQKDIPIILAAPTGRAARRMNELTGLASATIHRHLGLNGDNDYQAMEDYLDCDLLIVDEFSMVDTWLANQLLTAINSNTQLIIVGDSDQLPSVGPGQVLADLLKVDRIPHITLDKIFRQSEESTIVDLANHIRQGILAPDFCQKKADRSYFEAQAPFIPGMMTKIVQAALKSGIPAEEIQILAPMYKGLAGINSLNQLMQNLLNPLADQTEFLFNETAFRKGDKVLHLVNDAQLNVFNGDIGYITDLIPAKYTESKQDEIVIDFDGTEIVYPRNEWLKITLAYAMSIHKSQGSEFQVVILPVTRQSGRLLQRNLIYTAITRSKSKLIMLGEIAAFEEAIKKEGDKRHTYLVQRLQVAEADDHTAAASANESNESSLSVKPAPSPQKEQEQPPYLLTPHNFLAIDPMIGLTEDDMLTFFKKKS
>NZ_LS483354.1|WP_111721637.1|387714_388200_-|hypothetical-protein
MISYEQVRQALRTSTITIIIINAISMVITLFGLAGIFFLKSQLDKPEFRAQFSAEQLRLFEVGISPFTIFMSVISLGLVVLTTVLCGFNLSKIKQGTTVSYVPYIIGIVLYLISIISQLFSQIELVSMIIVLAELALYGFAFYKAKTLNEKDKDKPQSIEE
>NZ_LS483354.1|WP_012514982.1|386469_387573_+|DNA-polymerase-IV
MLIFPLINDTSRKIIHIDMDAFFAAVEERDNPELKGKPVVIGKDPRESGGRGVVSTCNYEARRFGIHSAMSSKEAYERCPQAIFISGDHAKYRRIGYDIREIFRRYTDQVEPVSIDEAYLDVTSNKLGIKSALKIARLIQYDIWNSLHLTCSAGVSYNKFLAKLASDFEKPHGLTLVLPDDALPFLEKLPIEKFHGVGKRTVERLHEMGIYTGQDLLRVPEMTLIDQFGRFGYELYRKARGISHSPVKPNRIRKSISSERTYAKLLYQEADIKAEISKNASRVADLLEANKKLGRIIVLKVRYADFTTLTKRVSLPELTRDARLIDQTARELFDSLEEHKEGIRLLGVTMTGLKDKVTDILLDLSFN
>NZ_LS483354.1|WP_041785270.1|399378_399663_-|hypothetical-protein
MKLTKTLCLVAATATIALAPINTSTGQTNTVLAMQGAKQRIDETKCTLLGHGHIQCPDGIHYHEKYDPYSLYSWVSRSFRAFTSVWRIVDGLFK
>NZ_LS483354.1|WP_012514994.1|399954_401103_-|A/G-specific-adenine-glycosylase
MIDLNDYGITMWDQDTIASFRRTLLAWYDQEKRDLPWRRTKDPYHIWVSEIMLQQTQVVTVIPYYERFLDWFPTVEALACADEERLLKAWEGLGYYSRVRNMQKAAQQIMTDFGGIFPSSHADITKLKGIGPYTAGAISSIAFDLPEPAVDGNVMRVMARLFEIDYDIGDPKNRKIFQAVMEVLIDPDRPGDFNQALMDLGTDIEAAKNPRPDESPVRFFCAAYRHGTYDKYPIKEPKKKPRPIQVQAFVIRDSQGRLLLEKNTQGRLLGGFWSFPLIETDFVSQQLTLFEDKPVVLETMSQTALFEERYGLVPDWSQATFPQVKHTFSHQKWTIELCEGFTDSMPLAPDRELVWVAIEDMAAYPMATPQKKMLETYLSKQS
>NZ_LS483354.1|WP_012514997.1|402480_402771_+|30S-ribosomal-protein-S6
MAKYEILYIIRPNIEEEAKNALVARFDSILTNNGATIVESKDWEKRRLAYEINDFREGLYHIVNLEATDAVALNEFDRLSKINGDILRHMIVKLDA
>NZ_LS483354.1|WP_012514998.1|402789_403278_+|single-stranded-DNA-binding-protein
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRAFKSQNGEREADFINCVIWRQQAENLANWAKKGALIGITGRIQTRNYENQQGQRVYVTEVVADNFQMLESRATREASSSGSYGGGFNGSPAANSYSAPTQQTPNFGRDESPFGGSNPMDISDDDLPF
>NZ_LS483354.1|WP_002983142.1|403436_403676_+|30S-ribosomal-protein-S18
MAQQRRGGFKRRKKVDFIAANKIEYVDYKDTELLSRFVSERGKILPRRVTGTSAKNQRKVTTAIKRARVMALMPYVNED
>NZ_LS483354.1|WP_165626751.1|403876_405219_+|IS3-like-element-ISSeq3-family-transposase
MTLSYEDKVQIYELRHIGKSIKCLSEKFSIAESDLKYMIRLIDRYGLAIVQKGKNSYYSPELKQEIIDKVLIDGQSQKQTSLDYALPNSSMLSRWIAQYKKNGYTILEKRRGRPPKMGRQPKKTLEQMTELERLQKELDYLRAENAVLKKPERIPVEGRSKAQRATEIIQELIGQFSLATLLEILDLSRSTYYYQVKQLAQEDKDMDLKELIQGIYDEHHGNYGYRRIHLELRNRGFIVNHKKVQRLMTVMGLKARIRRKRKYSSYKGEVGKKADNLIKRQFEGSKPYEKCYTDVTEFTLPEGKLYLSPVLDGYNSEIIDFTLSRSPDLKQVQTMLEKAFPADSYNGTILHSDQGWQYQHQSYHHFLETKGIRPSMSRKGNSPDNGMMESFFGILKSEMFYGLETTYQSLNELEQAITDYIFYYNNKRIKAKLKGLSPVQYRTKSFH
>NZ_LS483354.1|WP_012514999.1|405368_406019_-|DUF1129-domain-containing-protein
MDLQQLTKKNQEFIHIATNQLIKDGKTDEDIKTLLEEVIPTILENQKKGITARSLYGAPTAWAASFSKEANQKEATPKNTNPWLMWLDTSLLFIGIVGLLNSIMTFFNTNATVTGLVSLLALGFGGGASMYATYYFVYRHMGKDKSLRPSWFKVIGALTLAMLAWITLYAATAFLPKALNPQLPPVALLITGALAIGLRYLLQRKYNIQNTMTPQR
>NZ_LS483354.1|WP_012515000.1|406195_407140_-|magnesium-transporter-CorA-family-protein
MKQMFLSSAIEFKEIETFEPGAWIKLVNPSQEESIAIAEQFNIDISDLRAPLDVEETSRIAVEDDYTLIIVDVPVYEERNNKSYYVTMPLGIIVTESAVITTCLHDMTLFDQFHKRKVKNFYTFMKTRFVFQILYRNAELFLTALRTIDRQSERLEAQLEAATRNEELIDMMELEKSIVYLKASLKFNERIVKKLSSSTSSLKKYIEDEDLLEDTLIETQQAIEMAGIYENVLNAMTETTASIINNNQNTIMKTLALMTMALDIPTVIFSAYGMNFQDNWLPLNGLSHAFWYIVLLATLLSSFVVIYFIRKKWF
>NZ_LS483354.1|WP_012515001.1|407335_410158_+|excinuclease-ABC-subunit-UvrA
MQDKLIIHGARAHNLKNIDVEIPRDKLVVVTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLGNMEKPDVDSIDGLSPAISIDQKTTSKNPRSTVGTVTEINDYLRLLYARVGTPYCINGHGAITASSVEQIVEQVLELPERTRMQILAPLVRRKKGQHKTVFEKIQKDGYVRVRVDGEIFDVSEVPALSKSKMHNIEVVIDRLVNKDGIRSRLFDSIEAALRLGDGYLMIDTMDGNELLFSEYYSCPVCGFTVPELEPRLFSFNAPFGSCPTCDGLGIKLEVDLDLVVPDPSKTLREGALAPWNPISSNYYPTMLEQAMQSFGVDMDKPFEQLSEQEKELILYGSGDQEFHFHYVNDFGGERSIDIPFEGVVTNINRRYHETSSDYTRNVMRGYMNELTCAACHGYRLNDQALCVRVGGEHGLTIGQVSELSIADHLQLLDGLELSDNESTIAKPIIKEIHDRLTFLNNVGLNYLTLSRSAGTLSGGESQRIRLATQIGSNLSGVLYVLDEPSIGLHQRDNDRLIDSLKKMRDLGNTLIVVEHDEDTMMQADWLIDVGPSAGDFGGQIVASGTPQQVARHKRSITGQYLSGRKSIPVPLERRAGNGRFIDIKGAAQNNLQNLDVRFPLGKFIAVTGVSGSGKSTLVNSILKKAVAQKLNRNSEKPGRHRSITGIEHLERLIDIDQSPIGRTPRSNPATYTGVFDDIRELFAQTNEAKIRGYKKGRFSFNVKGGRCEACSGDGIIKIEMHFLPDVYVPCDVCHGRRYNSETLEVHYKGKNIAEILDMTVDDALVFFSAIPKIARKIQTIKDVGLGYVTLGQPATTLSGGEAQRMKLASELHKRSTGKSLYILDEPTTGLHTDDIARLLKVLERFVDDGNTVLVIEHNLDVIKSADHIIDLGPEGGVGGGQLVAAGTPEEVAAVEESYTGQYLKLKL
>NZ_LS483354.1|WP_041785274.1|410756_411833_+|aminopeptidase-P-family-protein
MSSFLAQRLSNCQALLEKKGLEAILITNLTNIYYLTGFSGTSATVFISPKRRVFITDSRYTLIAKASIEGFDIIESRTPLAEIAAILQADKLSSLAFEDQVSFSFYQHLQATFAGVSLLPQSGFIEALRLIKDASEIDIIAKACSISDKAFCDVLDFIKPGQTSELEVANFLDFRMRQYGASGISFDTIAASGYRSAMPHGRATDKIIQQGETLTLDFGCYYQHYVSDMTRTIHIGQVTDQEREIYELVLAANQALIAKASAGMTYREFDAIPRQLIAEAGYGSHFTHGIGHGIGLDIHEDPFFAKTDQRLLAGMVVTDEPGIYLDGKYGVRIEDDLVITETGCQVLTKAPKELIVLT

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Crispr_ID: NZ_LS483354_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LS483354_2

620462-621089

TypeI

I-C

Consensus_repeat	Method
GTCTCGCCCCATACGGGCGAGTGGATTGAAAT	PILER-CR
GTCTCGCCCCATACGGGCGAGTGGATTGAAAT	CRISPRCasFinder
GTCTCGCCCCATACGGGCGAGTGGATTGAAAT	CRT

9 spacers

cas2,cas1,cas4,cas7,cas8c,cas5,cas3

The CRISPR arrays of NZ_LS483354_2

>merge|NZ_LS483354|2|620462-621089|PILER-CR,CRISPRCasFinder,CRT
GTCTCGCCCCATACGGGCGAGTGGATTGAAATTGCTGACCCAAGCCAAGTGGGACATAATACTGGGTCTCGCCCCATACGGGCGAGTGGATTGAAATAAAAAATCAACTAGCCACTGGTTTCCTTTACGAACGTCTCGCCCCATACGGGCGAGTGGATTGAAATAAACTCAGCAATAGCTGATAGGAGGGTCAAAAAGTCTCGCCCCATACGGGCGAGTGGATTGAAATTTTTTTGACATTTTTTTGATAAGCTACAGCGATTGTCTCGCCCCATACGGGCGAGTGGATTGAAATGACTGTTACCCTAATAATTTTTTTAGTTGTGGTTGGTCTCGCCCCATACGGGCGAGTGGATTGAAATATCTTTGTGATCAGTCACTAGTAAGATCGTTAAGTCTCGCCCTATACGGGCGAGTGGATTGAAATTAGTCAGTCTCCGCTAAGGCAGGAGACAAGCCCAGGTCTCGCCCCATACGGGCGAGTGGATTGAAATCACATATAGCGGAACAATCGGACGCTATCATGGAGGTCTCGCCCCATACGGGCGAGTGGATTGAAATCCGACACTGCGAACTAATCATTTGTGACTCCTTTCGTCTCGCCCTTTGCGGGCGAGTGGATTGAAAT

>NZ_LS483354|2|1|620462-621022|PILER-CR
GTCTCGCCCCATACGGGCGAGTGGATTGAAAT	TGCTGACCCAAGCCAAGTGGGACATAATACTGG
GTCTCGCCCCATACGGGCGAGTGGATTGAAAT	AAAAAATCAACTAGCCACTGGTTTCCTTTACGAAC
GTCTCGCCCCATACGGGCGAGTGGATTGAAAT	AAACTCAGCAATAGCTGATAGGAGGGTCAAAAA
GTCTCGCCCCATACGGGCGAGTGGATTGAAAT	TTTTTTGACATTTTTTTGATAAGCTACAGCGATT
GTCTCGCCCCATACGGGCGAGTGGATTGAAAT	GACTGTTACCCTAATAATTTTTTTAGTTGTGGTTG
GTCTCGCCCCATACGGGCGAGTGGATTGAAAT	ATCTTTGTGATCAGTCACTAGTAAGATCGTTAA
GTCTCGCCCTATACGGGCGAGTGGATTGAAAT	TAGTCAGTCTCCGCTAAGGCAGGAGACAAGCCCAG
GTCTCGCCCCATACGGGCGAGTGGATTGAAAT	CACATATAGCGGAACAATCGGACGCTATCATGGAG
GTCTCGCCCCATACGGGCGAGTGGATTGAAAT

>NZ_LS483354|2|2|620462-621089|CRISPRCasFinder
GTCTCGCCCCATACGGGCGAGTGGATTGAAAT	TGCTGACCCAAGCCAAGTGGGACATAATACTGG
GTCTCGCCCCATACGGGCGAGTGGATTGAAAT	AAAAAATCAACTAGCCACTGGTTTCCTTTACGAAC
GTCTCGCCCCATACGGGCGAGTGGATTGAAAT	AAACTCAGCAATAGCTGATAGGAGGGTCAAAAA
GTCTCGCCCCATACGGGCGAGTGGATTGAAAT	TTTTTTGACATTTTTTTGATAAGCTACAGCGATT
GTCTCGCCCCATACGGGCGAGTGGATTGAAAT	GACTGTTACCCTAATAATTTTTTTAGTTGTGGTTG
GTCTCGCCCCATACGGGCGAGTGGATTGAAAT	ATCTTTGTGATCAGTCACTAGTAAGATCGTTAA
GTCTCGCCCTATACGGGCGAGTGGATTGAAAT	TAGTCAGTCTCCGCTAAGGCAGGAGACAAGCCCAG
GTCTCGCCCCATACGGGCGAGTGGATTGAAAT	CACATATAGCGGAACAATCGGACGCTATCATGGAG
GTCTCGCCCCATACGGGCGAGTGGATTGAAAT	CCGACACTGCGAACTAATCATTTGTGACTCCTTTC
GTCTCGCCCTTTGCGGGCGAGTGGATTGAAAT

>NZ_LS483354|2|1|620462-621089|CRT
GTCTCGCCCCATACGGGCGAGTGGATTGAAAT	TGCTGACCCAAGCCAAGTGGGACATAATACTGG
GTCTCGCCCCATACGGGCGAGTGGATTGAAAT	AAAAAATCAACTAGCCACTGGTTTCCTTTACGAAC
GTCTCGCCCCATACGGGCGAGTGGATTGAAAT	AAACTCAGCAATAGCTGATAGGAGGGTCAAAAA
GTCTCGCCCCATACGGGCGAGTGGATTGAAAT	TTTTTTGACATTTTTTTGATAAGCTACAGCGATT
GTCTCGCCCCATACGGGCGAGTGGATTGAAAT	GACTGTTACCCTAATAATTTTTTTAGTTGTGGTTG
GTCTCGCCCCATACGGGCGAGTGGATTGAAAT	ATCTTTGTGATCAGTCACTAGTAAGATCGTTAA
GTCTCGCCCTATACGGGCGAGTGGATTGAAAT	TAGTCAGTCTCCGCTAAGGCAGGAGACAAGCCCAG
GTCTCGCCCCATACGGGCGAGTGGATTGAAAT	CACATATAGCGGAACAATCGGACGCTATCATGGAG
GTCTCGCCCCATACGGGCGAGTGGATTGAAAT	CCGACACTGCGAACTAATCATTTGTGACTCCTTTC
GTCTCGCCCTTTGCGGGCGAGTGGATTGAAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LS483354.1\|WP_012515201.1\|618983_620009_+\|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
NZ_LS483354.1\|WP_012515194.1\|610737_611109_+\|TNT-domain-containing-protein	unknown	unknown	gnl\|CDD\|379424
NZ_LS483354.1\|WP_012515198.1\|615581_617465_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	cd09642_cas8c_CAS-I-C	gnl\|CDD\|187773
NZ_LS483354.1\|WP_012515197.1\|614862_615582_+\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	gnl\|CDD\|273847
NZ_LS483354.1\|WP_041785342.1\|626006_626747_+\|response-regulator	unknown	unknown	gnl\|CDD\|227095
NZ_LS483354.1\|WP_012515199.1\|617465_618314_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	COG3649_cas7_CAS-I-C	gnl\|CDD\|187820
NZ_LS483354.1\|WP_111721761.1\|611184_611703_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LS483354.1\|WP_012515209.1\|629604_630309_+\|B3/4-domain-containing-protein	unknown	unknown	gnl\|CDD\|225917
NZ_LS483354.1\|WP_012515212.1\|632180_632861_+\|Crp/Fnr-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223736
NZ_LS483354.1\|WP_012515205.1\|624625_625738_+\|peptide-methionine-(R)-S-oxide-reductase-MsrB	unknown	unknown	gnl\|CDD\|184456
NZ_LS483354.1\|WP_012515192.1\|610049_610379_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LS483354.1\|WP_012515207.1\|626743_628462_+\|histidine-kinase	unknown	unknown	gnl\|CDD\|225519
NZ_LS483354.1\|WP_012515208.1\|628501_629590_+\|MmcQ/YjbR-family-DNA-binding-protein	unknown	unknown	gnl\|CDD\|225197
NZ_LS483354.1\|WP_012515200.1\|618315_618987_+\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|224385
NZ_LS483354.1\|WP_012515202.1\|620019_620313_+\|CRISPR-associated-endonuclease-Cas2	cas2	COG1343_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|187856
NZ_LS483354.1\|WP_041785339.1\|623957_624608_+\|TlpA-family-protein-disulfide-reductase	unknown	unknown	gnl\|CDD\|239264
NZ_LS483354.1\|WP_111710414.1\|612168_614622_+\|CRISPR-associated-helicase-Cas3'	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_LS483354.1\|WP_024273154.1\|630567_631056_+\|prolyl-tRNA-synthetase-associated-domain-containing-protein	unknown	unknown	gnl\|CDD\|239827
NZ_LS483354.1\|WP_014622479.1\|623233_623944_+\|thiol-disulfide-oxidoreductase-associated-membrane-protein-CcdA2	unknown	unknown	gnl\|CDD\|223856
NZ_LS483354.1\|WP_012515211.1\|631566_632040_-\|arginine-repressor	unknown	unknown	gnl\|CDD\|224355

Protein	Function_ID	Function_description	E-value
NZ_LS483354.1\|WP_012515212.1\|632180_632861_+\|Crp/Fnr-family-transcriptional-regulator	gnl\|CDD\|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	1.29329e-40
NZ_LS483354.1\|WP_012515194.1\|610737_611109_+\|TNT-domain-containing-protein	gnl\|CDD\|379424	pfam14021, TNT, Tuberculosis necrotizing toxin. This is the C-terminal domain secreted by Mycobacterium tuberculosis (Mtb). It induces necrosis of infected cells to evade immune responses. Mtb utilizes the protein CpnT to kill human macrophages by secreting its C-terminal domain (CTD), named tuberculosis necrotizing toxin (TNT) that induces necrosis. It acts as a NAD+ glycohydrolase which hydrolyzes the essential cellular coenzyme NAD+ in the cytosol of infected macrophages resulting in necrotic cell death. CpnT transports its toxic CTD from the cell surface of M. tuberculosis by proteolytic cleavage, where the toxin is cleaved to induce host cell death. Structural analysis determined that the TNT core contains only six beta-strands as opposed to seven found in all known NAD+-utilizing toxins, and is significantly smaller, with only two short alpha-helices and two 3/10 helices. Furthermore, the putative NAD+ binding pocket identified Q822, Y765 and R757 as residues possibly involved in NAD+-binding and hydrolysis based on similar positions of catalytic amino acids of ADP-ribosylating toxins. While glutamine 822 residue was detected to be highly conserved among TNT homologs.	2.39149e-28
NZ_LS483354.1\|WP_012515198.1\|615581_617465_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|187773	cd09642, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; signature gene for I-C subtype; also known as Csd1 family.	5.93219e-115
NZ_LS483354.1\|WP_012515197.1\|614862_615582_+\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|273847	TIGR01876, cas_Cas5d, CRISPR-associated protein Cas5, subtype I-C/DVULG. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This small Cas family is represented by CT1134 of Chlorobium tepidum. This family belongs to a set of several Cas protein families, one each for a number of different CRISPR/Cas subtypes, that share a region of N-terminal sequence similarity modeled by TIGR02593. This family represents the Dvulg subtype of CRISPR/Cas locus.	1.68122e-93
NZ_LS483354.1\|WP_041785342.1\|626006_626747_+\|response-regulator	gnl\|CDD\|227095	COG4753, COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms].	4.8588e-79
NZ_LS483354.1\|WP_012515199.1\|617465_618314_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|187820	cd09689, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas7 is a RAMP superfamily protein; Subunit of the Cascade complex; also known as Csd2 family.	8.2441e-137
NZ_LS483354.1\|WP_012515201.1\|618983_620009_+\|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	0
NZ_LS483354.1\|WP_012515209.1\|629604_630309_+\|B3/4-domain-containing-protein	gnl\|CDD\|225917	COG3382, COG3382, Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta [General function prediction only].	1.77584e-91
NZ_LS483354.1\|WP_012515205.1\|624625_625738_+\|peptide-methionine-(R)-S-oxide-reductase-MsrB	gnl\|CDD\|184456	PRK14018, PRK14018, bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB.	6.97771e-166
NZ_LS483354.1\|WP_012515207.1\|626743_628462_+\|histidine-kinase	gnl\|CDD\|225519	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].	1.28057e-62
NZ_LS483354.1\|WP_012515208.1\|628501_629590_+\|MmcQ/YjbR-family-DNA-binding-protein	gnl\|CDD\|225197	COG2315, MmcQ, Uncharacterized protein conserved in bacteria [Function unknown].	1.44118e-23
NZ_LS483354.1\|WP_012515200.1\|618315_618987_+\|CRISPR-associated-protein-Cas4	gnl\|CDD\|224385	COG1468, COG1468, CRISPR-associated protein Cas4 (RecB family exonuclease) [Defense mechanisms].	4.92901e-31
NZ_LS483354.1\|WP_012515202.1\|620019_620313_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	5.21659e-31
NZ_LS483354.1\|WP_041785339.1\|623957_624608_+\|TlpA-family-protein-disulfide-reductase	gnl\|CDD\|239264	cd02966, TlpA_like_family, TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.	4.61914e-35
NZ_LS483354.1\|WP_111710414.1\|612168_614622_+\|CRISPR-associated-helicase-Cas3'	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	3.38059e-83
NZ_LS483354.1\|WP_024273154.1\|630567_631056_+\|prolyl-tRNA-synthetase-associated-domain-containing-protein	gnl\|CDD\|239827	cd04335, PrdX_deacylase, This CD includes bacterial (Agrobacterium tumefaciens and Caulobacter crescentus ProX, and Clostridium sticklandii PrdX) and eukaryotic (Plasmodium falciparum N-terminal ProRS editing domain) sequences. The C. sticklandii PrdX protein, a homolog of the YbaK and ProX proteins, and the prolyl-tRNA synthetase-editing domain (ProRS-INS), specifically hydrolyzes Ala-tRNA(Pro). In this CD, many of the eukaryotic editing domains are N-terminal and cis-acting, expressed from a multidomain ProRS, however, similar to the bacterial PrdX, the mammalian, amphibian, and echinoderm PrdX-like proteins are trans-acting, single-domain proteins.	3.79531e-60
NZ_LS483354.1\|WP_014622479.1\|623233_623944_+\|thiol-disulfide-oxidoreductase-associated-membrane-protein-CcdA2	gnl\|CDD\|223856	COG0785, CcdA, Cytochrome c biogenesis protein [Posttranslational modification, protein turnover, chaperones].	8.62107e-42
NZ_LS483354.1\|WP_012515211.1\|631566_632040_-\|arginine-repressor	gnl\|CDD\|224355	COG1438, ArgR, Arginine repressor [Transcription].	8.79004e-63

>NZ_LS483354.1|WP_012515202.1|620019_620313_+|CRISPR-associated-endonuclease-Cas2
MMVLVTYDVNTETASGRKRLRQVAKLCVDYGQRVQHSVFECSVTPAEFVEIKHKLTTIIDTEVDSIRFYLLGKHWQNRVETLGRSDSYDPDIGVLLL
>NZ_LS483354.1|WP_012515201.1|618983_620009_+|type-I-C-CRISPR-associated-endonuclease-Cas1
MKKLLNTLYLTQEDYYITKEGDNIVIKQDGKTVSRFPFRIIDGVVCFSYLGASPALIKLCTENQINLSFHTPQGRFCGRYVGATNGNVLLRREHYRLADRDESLEYAKRFILAKISNARKYLLHFRRDHRDQIDGKLFEEVNGELIWALEMVQATDNKDSLRGIEGQAANQYFRIFNDLVLTDKKAFTFGGRSKRPPLDRVNALLSFGYSLLTFECQSALEAVSLDSYVGFFHTDRPGRASLALDLVEEFRSYIIDRFVFSLINKGQLTKKHFDVKESGSILLTEKGRVTFIELWQKRKHMEVEHPFTKEKVKLMLLPYVQAQLLAKAIRGDIDSYPPFMI
>NZ_LS483354.1|WP_012515200.1|618315_618987_+|CRISPR-associated-protein-Cas4
MVYVEDDYLMLSGIQHFQFCKRQWALIHIDQQWADNEATVHGQILHTRADNPYIREKRKDFFLSRAMHISSARLGLYGVMDVVEFYKDDSGVTVKGKRGRWLPRVVEYKRGKPKKDRRDIVQLVAQTMCLEETLNCQIAEGSLYYHSVNKKVQIAITDELRREVQELANQMHRFYGAKELPKAEYFKNCQLCSLVEVCKPRISKKVRNVDRYIAAAMVSEEII
>NZ_LS483354.1|WP_012515199.1|617465_618314_+|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MLEHKIDFMVTVEVKEANANGDPLSGNMPRTNAKGYGLMSDVSIKRKIRNRLQDMGQSIFVQANERIEDEFRSLENRFSAQFDKNDKDDDIERRANELWLDVRSFGQVFTYLKKSIGVRGPVSISMAKSLEPVVISSLQITRSTNGMEPKGDSSRSSDTMGTKHFVDYGIYVIKGSINAHFAEKTGFSEEDADIIKQALVSLFENDASSARPEGSMRVREVFWFTHSNKLGNVSSARVFDLLVFDMETPDKDSYEAYGIHLDEENLAAYQAKGLTVEVLEGL
>NZ_LS483354.1|WP_012515198.1|615581_617465_+|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MDFFASLLRAYEHAEDIGLVDNQEQSGTILLPIYHTNRRSNGKDTIVVQLDKTGQFMKAEYLADGETIIFPVTAESVARSGKNPAPHPLVDKLTYFVSAHNQEQYETYHQQLEGWINACQDKQVMSYLSLIQQFILKEDFLDLICQSLFGKQISRNGLKVTYVLSEEKEKTVDLSACFLTFQIAQFIGFKTVSVTNFTALHKDYIAYLMSKQTANTICNISGQKEVLATKHRGLLGNAKLISVSNHAEAYKGRFRERDDVFRVGNQTSEKLHLMAKYFLEHEQTHVWLGSGQHMINWFSDDLANDSQLNITQALLLDPFDDEETFLSTPMISEENKSINRSFITGQRQFSDNASYYIAILNKTNDGRIALKYFRQLQASSLLKNLAVWQENYSWELQRKGNQFVQKLPSFKEIILAAYGVDRDRSLELDNDNFRSDQYQRLVTSLIDGKPLPDTIVKKLEANIKQRQKYRKHWHQVEHISLAILHKQNGEEFTPMLDRDNTNRSYLFGRLLGIYELIEKSRNNSKGRAKDELKRITNAERYWTAYANRPASLMRNLEDKIYPYSEYLKINEAGLWSKLEKEREEIIALLTSSLETTDFNKPLDYRFIFGYYAEKKYFYTPKDESEDA
>NZ_LS483354.1|WP_012515197.1|614862_615582_+|type-I-C-CRISPR-associated-protein-Cas5
MRVRGDIALFTNPATKGSSERSSYPVPTRQALQGIVDAVYHKPTITNVVTEVKVINQIQTELHGTRALLKDYGADLSYVSYLSDVEYLIKYHFVWNENRPDLVKDRLPNKHEAIMERSLRKGGRRDVFLGTRECLGLVEAISQEEYETAQIASEHANQEIDLGIMFHSFAYPTDRKEPLRSYFTRTVMTNGTIHFKEQAECEIVNTLSSYTFKPAGPIKPVEEEFEGYQLDTIRETGGQ
>NZ_LS483354.1|WP_111710414.1|612168_614622_+|CRISPR-associated-helicase-Cas3'
MILAHYQGKTDLEPAKEQSLEEHSFQVAELARTAATSIKQGDLLFLLGLFHDLGKAGYRFQEKLLKKPNSHVDHAYAGARYLYDEIGKILLGHVQQYPHSKSLVLYFRDIVAYVISAHHGMYDLRMTEPAEEASRFAYNKLLHRMFQERPGYHYQKDVFTFVEVLEQSLPRYGYDHLADLITRAFYNFQLAWDKLDMADSSEQDYYSGCFVRLYLSLLKNADVLDTINAYETVIEPLTEEKQEELRISYLEAVESLYASFGQSKLRLNAIRNKLAERVKGRGREDSTGIYRLNLPTGAGKTNLSLRYATHQMVYQQKKHFLYVTPFLSVLEQNALAMKQVIGEEGVLEHHSNVVREIDNTNQNNDDADEDRDSLRREYLIDSWDSPVVLTSMVQFFQTLFKTRSAHLRRFSSLIDSVVILDEVQSLPIEVTTLFNLTMTFLSRVMQTTIVLCTATQPAYDSESITHTLTYGGSKAEEADIVTVTDEEQLAFTRTELCKLSDSDEKTSLVELAHTILEQEMSTLVILNTKPAVERLYQHLRDQTERPLYQLSTNMCPKHRLDVIAEIKSRLPNNVPLICVSTQLIEAGVDIDFERVIRSYAGIDSIVQAAGRCNREGRCPIGQVLLVNLTDDEENLSYLKEIKHKKDATETILYQKTSLIDIAALNEAFFNCYYENNKKRLDYPLGDNESVYQYLSSNAPSNIKKGKLRQAFKTAGQKMDLIQDQSIGVFVYYDDGVGRERLEALEEQLLKSSYPSSEELKAIKAELKALQPYTITLRDNHELLKATRSYLSGQILILQEHYYNQTFGLTKEADSFIL
>NZ_LS483354.1|WP_111721761.1|611184_611703_+|hypothetical-protein
MSVSDGVDIIYCMEKREDKYDISISERGKVITQHRVLNSKLARLYYILLVKKALTTIKYPLLNSIGNVDSEELLRAQLNSEGLENYYSINKNGIGKVNFQNIGKDRLYYLDNKNNAYDIFFVSSKVLSVFYTSIVRLKWYEKWIEQLSSIEDISSDLYPILLGFSHEGIEIL
>NZ_LS483354.1|WP_012515194.1|610737_611109_+|TNT-domain-containing-protein
MARDNDDPNLDRFLNGEFKTTKLQSGKKIDRFGSNYGSFFGEVGDSRALRAMSPNSDFSNYNQYEVLEELPVREGKIAPWFDEPGGGRQYKLDSDFVNQLQPLLQDGTPLIDKLIELGYLRRI
>NZ_LS483354.1|WP_012515192.1|610049_610379_+|hypothetical-protein
MKVQGKIIILENDRIEFDFDIRTVIETSHFFIILLSIPFDTESVNNIYGINKTNREMWQIENHQFWTKLLPYENISKGESGDIFATDFYGRRVVIDETTGLIKSHSIVK
>NZ_LS483354.1|WP_014622479.1|623233_623944_+|thiol-disulfide-oxidoreductase-associated-membrane-protein-CcdA2
MELTMLLMVSVFIAGLLSFFSPCIFPVLPVYLGILLDSDDSRSITIFGKKLYWYGIVKTLAFISGLSTIFIILGYGAGLLGNILYAAWFRYLLGAFVILLGIHQMEIVTIKKLQFQKSVAFQNKKDRNAVLNAFLLGITFSFGWTPCVGPVLSSVLALAASGGSGAWQGGFLMIIYTLGLGLPFLLLSFASGIVLKHFNKLKPHIPLLKKLGGLLIVVMGLLLMTGNLNSLSGLFE
>NZ_LS483354.1|WP_041785339.1|623957_624608_+|TlpA-family-protein-disulfide-reductase
MKKTTFLTTGLACLALLTACSAKDKMAMNDNKKDHMTMTDDKSKMKKDQKDMMSDKKDMMSDDKHMSDADKASKNDGQMAPDFELKSIDGKTYRLSDFKGKKVYLKFWASWCSICLSTLGDTQSLATMKDKDFEVLTIVSPGHQGEKSEADFKKWFEGTDFKDLPVLLDPDGKLLEAYGVRSYPTEIFVGSDGILAKKHIGYAKKSEIEKTLKEIK
>NZ_LS483354.1|WP_012515205.1|624625_625738_+|peptide-methionine-(R)-S-oxide-reductase-MsrB
MEHKWKLLLLVFGALVFLGGVLMVFQRGYATSYHNNQVKLPAKGTSQLKKTANAKLPEKKKEIYLAGGCFWGVEEYFSNVDGVLDAVSGYANGRGDTTSYQLLHQTGHAETVQVVYDANRISLKELLLHYFRIIDPTSLNKQGNDRGSQYRTGVYYTDPSDLTVIDMVFQEKASDYKKKIVVEKAPLKSFTKAEEYHQDYLKKNPNGYCHINVNEASYPVIDKTKYPKPSKEEIKKKLSKDEYRVTQNNETEKAFSNRYWDSFEAGIYVDVVTGEPLFSSKDKFESGCGWPSFSRPISPDVLRYKTDKSFNMNRTEVRSRSGNSHLGHVFTDGPKDQGGLRYCINSLSIRFIPKAEMEAKGYGYLLTAVD
>NZ_LS483354.1|WP_041785342.1|626006_626747_+|response-regulator
MYSLLIVEDEYLVRQGIRSLVDFDQFAIDRIAEAENGQVAWELFQENPYDIVLTDINMPKLNGIQLAELIKTRAPKTHLVFLTGYDDFNYALSALKLGADDYLLKPFSKSDVEEMLKKLKQKLEKLKKTEALQKLVDKPQQEGSEIKLAIQERLADSSLTLKSLSSQLGFSPNYLSVLIKKDLGLPFQDYLIQERLKKAKLLLLTTDLRVYEIAEQVGFEDINYFSQRFKQLVGTTPRQYKKGEGQ
>NZ_LS483354.1|WP_012515207.1|626743_628462_+|histidine-kinase
MKRYPLLVQLVSYFFLIVISLITILGVIYYQTSSHNIRQLIERETRQSIRQSSQFIDAYIKPLKETTSALANHTSIQAFAKDANSNDQSQVLALMTTVLSTNSDLLSAVLVTKDGRMVTTNPKLTMTTSHDMMAELWYKSAIDRKAMPVLTPARQLSSHSKKDWVVSVTQEVVDQAGNNLGVLRLDIGYNTIKSSLDQLQLGRKGFAFIVNDKHEFVYHPKNTVYSSEREMAAMKPYLAVADGYTKPKDYFVYQRVIPDSQWTLIGVASLDQLYHVQRQIFWSFLGTGLLATIICGLGTVFVLRSWIGPIRRLQALILAIQKGNRQLRAEETGSPELADLARQFNAMLDQIDSLMVSVADKEKAIGQYRLQALASQINPHFLYNTLDTIIWMAEFNDSQRVVDVTKSLAKYFRLALNQGNEFISLADELDHARQYLFIQKQRYGEKLHYEIKGLEKYQDFMIPKLILQPLVENAIYHGIKEVDRPGMIRVTVLEADRHVILSVWDNGKGISLVDDSSQALLERGGVGLKNVDQRLKLQYGHLYRMAITSEQAVFTEIKLYLPKPLDGLNELP
>NZ_LS483354.1|WP_012515208.1|628501_629590_+|MmcQ/YjbR-family-DNA-binding-protein
MSLESDYFKRKSPVFEALIPYGFTQEGDTYCYQESFMEGDFKALITIKSSGQLSARVIDTDLGEDYLPLRNARQQGVYIGQVRQAYLELLGRLSAACFRPTPFQTRQANQVATSISQQWNDPLDYPFEKYPNIATYRVSGKWYAMILPLLADKLGQVPKALQGQTVEVMTVKAAPNQLTNLLQQRGVYPAYHMSKKTWISLLLDGTLADDQLWELVTKSRQLANPNGLANPDGPDYWVIPANLSYYDIDAEFAANPDILWTQKASIKAGDYVFIYITAPTRSIRYACQVLRSDIPNQGYRKNAKIKTLMSLRLLHCYEDGLISLDLMKQYGVNAVRGPRRLSPQLVAFLKEKEYFKDVKQKE
>NZ_LS483354.1|WP_012515209.1|629604_630309_+|B3/4-domain-containing-protein
MTQFIADQSFWELFPDAKLGVLLLRNYDNQEDSPQEVKQLLADSHDIAKQYLTEESFSDNEIIQVYRQAYQRFKTKKGARSSIEALLKRVANGQVLSSINPLVDIYNAASLRFGLPVGAEDSDCFVGDLRLTLTEGGDEFYLIGDSKNSPTLPNELCYKDDAGAVCRCLNWRDGERTMITDRTKNAFLVIEALDSKTQARLQDALKFIEDKAKCYLKAETALYTLDQASPSITF
>NZ_LS483354.1|WP_024273154.1|630567_631056_+|prolyl-tRNA-synthetase-associated-domain-containing-protein
MELFDKVDDTLKALAIDYQLVEHEPALTTEQADQFIEGIEGVRTKTMFLTTRKKNHFYLVIMDDTKRLDMNRFKELVGEKQIKMASAECLLAKMQLPPGVVSPFGLLNNEDKDIQVYVDKAIAHEARMSFHPNTNDKTIFIQTDDLFRFLAAIGYAVNIVDL
>NZ_LS483354.1|WP_012515211.1|631566_632040_-|arginine-repressor
MNKKETRHQLIRSLISETTIHTQQELQERLRKNGISITQATLSRDMKELNLVKVTTGNDTHYEALAISQTRWEHRLRFYMEDALVMLRVVQHQIILKTLPGLAQSFGSILDAMQISEIVATICGDDTCLIICEDNEQAKACFEILSHYTPPFFFSNK
>NZ_LS483354.1|WP_012515212.1|632180_632861_+|Crp/Fnr-family-transcriptional-regulator
MIRREDYQYLRKLDDFCHFSIEQFDKIVGQMEFRQAKKDHMLFFEGDKRDRLFLVTSGYFKIEQSDRTGTFTYTDFIRHGTIFPYGGLFTDDYYHFSVVAMTDVTYFYFPTDLFEDYSLHNQQQMKHLYSKMSSLLELHELKVRNLITSSASSRVIQSLAILLVEMGKDSDTLPFQLTTTDIAQMSGTTRETVSHVFRDLKKEGLIAVKGKYLTYLDKNYFLQYTT

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Crispr_ID: NZ_LS483354_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LS483354_3

896641-896750

Orphan

Consensus_repeat	Method
CTGACTTGATGACAGCTTATACTAAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LS483354_3

>merge|NZ_LS483354|3|896641-896750|CRISPRCasFinder
CTGACTTGATGACAGCTTATACTAAAATGCAATATAATTTGTCGTTTGAGTCAATAATAAGATGATAGATCATTACTATTTATCTGAGTTGATGACAGCTTATACTAAAA

>NZ_LS483354|3|3|896641-896750|CRISPRCasFinder
CTGACTTGATGACAGCTTATACTAAAA	TGCAATATAATTTGTCGTTTGAGTCAATAATAAGATGATAGATCATTACTATTTAT
CTGAGTTGATGACAGCTTATACTAAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LS483354.1\|WP_111721667.1\|908018_911663_+\|helicase-exonuclease-AddAB-subunit-AddA	unknown	unknown	gnl\|CDD\|274299
NZ_LS483354.1\|WP_012515450.1\|890394_890943_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LS483354.1\|WP_012515463.1\|911928_913044_+\|aminotransferase	unknown	unknown	gnl\|CDD\|235989
NZ_LS483354.1\|WP_041785436.1\|897319_897955_+\|zf-HC2-domain-containing-protein	unknown	unknown	gnl\|CDD\|379219
NZ_LS483354.1\|WP_165626699.1\|887881_889063_+\|YSIRK-type-signal-peptide-containing-protein	unknown	unknown	gnl\|CDD\|370249
NZ_LS483354.1\|WP_012515457.1\|898791_899469_+\|DUF4956-domain-containing-protein	unknown	unknown	gnl\|CDD\|379819
NZ_LS483354.1\|WP_012515451.1\|890935_891223_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LS483354.1\|WP_111721664.1\|881330_882440_+\|YSIRK-type-signal-peptide-containing-protein	unknown	unknown	gnl\|CDD\|236768
NZ_LS483354.1\|WP_111721763.1\|898082_898778_+\|polyphosphate-polymerase-domain-containing-protein	unknown	unknown	gnl\|CDD\|143622
NZ_LS483354.1\|WP_111721665.1\|889142_890225_+\|LPXTG-cell-wall-anchor-domain-containing-protein	unknown	unknown	gnl\|CDD\|236768
NZ_LS483354.1\|WP_012515447.1\|886760_887570_+\|class-C-sortase	unknown	unknown	gnl\|CDD\|320676
NZ_LS483354.1\|WP_165626701.1\|903196_904597_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133045
NZ_LS483354.1\|WP_012515458.1\|899474_900908_+\|CotH-kinase-family-protein	unknown	unknown	gnl\|CDD\|378045
NZ_LS483354.1\|WP_111721666.1\|892785_896502_+\|pullulanase	unknown	unknown	gnl\|CDD\|273973
NZ_LS483354.1\|WP_012515446.1\|885243_886680_+\|isopeptide-forming-domain-containing-fimbrial-protein	unknown	unknown	gnl\|CDD\|374637
NZ_LS483354.1\|WP_012515459.1\|900914_903056_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LS483354.1\|WP_012515454.1\|896790_897330_+\|RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|224511
NZ_LS483354.1\|WP_012678093.1\|891222_891678_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LS483354.1\|WP_041785432.1\|883264_885229_+\|Cna-B-type-domain-containing-protein	unknown	unknown	gnl\|CDD\|377553
NZ_LS483354.1\|WP_041785439.1\|904807_908029_+\|ATP-dependent-nuclease-subunit-B	unknown	unknown	gnl\|CDD\|274291

Protein	Function_ID	Function_description	E-value
NZ_LS483354.1\|WP_111721667.1\|908018_911663_+\|helicase-exonuclease-AddAB-subunit-AddA	gnl\|CDD\|274299	TIGR02785, ATP-dependent_helicase/nuclease_subunit_A, helicase-exonuclease AddAB, AddA subunit, Firmicutes type. AddAB, also called RexAB, substitutes for RecBCD in several bacterial lineages. These DNA recombination proteins act before synapse and are particularly important for DNA repair of double-stranded breaks by homologous recombination. The term AddAB is used broadly, with AddA homologous between the Firmicutes (as modeled here) and the alphaproteobacteria, while the partner AddB proteins show no strong homology across the two groups of species. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_LS483354.1\|WP_012515463.1\|911928_913044_+\|aminotransferase	gnl\|CDD\|235989	PRK07324, PRK07324, transaminase; Validated.	0
NZ_LS483354.1\|WP_165626699.1\|887881_889063_+\|YSIRK-type-signal-peptide-containing-protein	gnl\|CDD\|370249	pfam09028, Mac-1, Mac 1. The bacterial protein Mac 1 adopts an alpha/beta fold, with 14 beta strands and 9 alpha helices. The N-terminal domain is made up predominantly of alpha helices, whereas the C-terminal domain consists predominantly of beta sheets. Mac 1 blocks polymorphonuclear opsonophagocytosis, inhibits the production of reactive oxygen species and contains IgG endopeptidase activity.	1.2887e-45
NZ_LS483354.1\|WP_041785432.1\|883264_885229_+\|Cna-B-type-domain-containing-protein	gnl\|CDD\|377553	pfam05738, Cna_B, Cna protein B-type domain. This domain is found in Staphylococcus aureus collagen-binding surface protein. The structure of the repetitive B-region has been solved and forms a beta sandwich structure.	3.4458e-30
NZ_LS483354.1\|WP_111721664.1\|881330_882440_+\|YSIRK-type-signal-peptide-containing-protein	gnl\|CDD\|236768	PRK10819, PRK10819, transport protein TonB; Provisional.	1.08391e-13
NZ_LS483354.1\|WP_041785436.1\|897319_897955_+\|zf-HC2-domain-containing-protein	gnl\|CDD\|379219	pfam13490, zf-HC2, Putative zinc-finger. This is a putative zinc-finger found in some anti-sigma factor proteins.	1.61402e-08
NZ_LS483354.1\|WP_111721763.1\|898082_898778_+\|polyphosphate-polymerase-domain-containing-protein	gnl\|CDD\|143622	cd07750, PolyPPase_VTC_like, Polyphosphate(polyP) polymerase domain of yeast vacuolar transport chaperone (VTC) proteins VTC-2, -3 and- 4, and similar proteins. Saccharomyces cerevisiae VTC-1, -2, -3, and -4 comprise the membrane-integral VTC complex. VTC-2, -3, and -4 contain polyP polymerase domains. For S. cerevisiae VTC4 it has been shown that this domain generates polyP from ATP by a phosphotransfer reaction releasing ADP. This activity is metal ion-dependent. The ATP gamma phosphate may be cleaved and then transferred to an acceptor phosphate to form polyP. PolyP is ubiquitous. In prokaryotes, it is a store of phosphate and energy. In eukaryotes, polyPs have roles in bone calcification, and osmoregulation, and in phosphate transport in the symbiosis of mycorrhizal fungi and plants. This subgroup belongs to the CYTH/triphosphate tunnel metalloenzyme (TTM)-like superfamily, whose enzymes have a unique active site located within an eight-stranded beta barrel.	2.552e-64
NZ_LS483354.1\|WP_165626701.1\|903196_904597_+\|glycosyltransferase	gnl\|CDD\|133045	cd06423, CESA_like, CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the elongation of beta-1,2 polyglucose chains of Glucan.	1.02982e-55
NZ_LS483354.1\|WP_012515458.1\|899474_900908_+\|CotH-kinase-family-protein	gnl\|CDD\|378045	pfam08757, CotH, CotH kinase protein. Members of this family include the spore coat protein H (cotH). This protein is an atypical protein kinase that phosphorylates CotB and CotG.	1.35161e-70
NZ_LS483354.1\|WP_111721666.1\|892785_896502_+\|pullulanase	gnl\|CDD\|273973	TIGR02102, alkaline_amylopullulanase, pullulanase, extracellular, Gram-positive. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. In contrast, a glycogen debranching enzyme such GlgX, homologous to this family, can release glucose at alpha,1-6 linkages from glycogen first subjected to limit degradation by phosphorylase. Characterized members of this family include a surface-located pullulanase from Streptococcus pneumoniae () and an extracellular bifunctional amylase/pullulanase with C-terminal pullulanase activity (.	0
NZ_LS483354.1\|WP_111721665.1\|889142_890225_+\|LPXTG-cell-wall-anchor-domain-containing-protein	gnl\|CDD\|236768	PRK10819, PRK10819, transport protein TonB; Provisional.	1.24556e-11
NZ_LS483354.1\|WP_012515446.1\|885243_886680_+\|isopeptide-forming-domain-containing-fimbrial-protein	gnl\|CDD\|374637	pfam16569, GramPos_pilinBB, Gram-positive pilin backbone subunit 2, Cna-B-like domain. GramPos_pilinBB is one of the major backbone units of Gram-positive pili, such as those from S.pneumoniae. There are three major pilin subunits that form the polymeric backbone of the pilin from S. pneumoniae, constructed of three transthyretin-like, CnaB, domains along with a crucial N-terminal domain, D1. The three Cna-B like domains are stabilized by internal Lys-Asn isopeptdie bonds, Gram-positive pili are formed from a single chain of covalently linked subunit proteins (pilins), usually comprising an adhesin at the distal tip, a major pilin that forms the polymer shaft and a minor pilin that mediates cell wall anchoring at the base.	1.09468e-18
NZ_LS483354.1\|WP_012515454.1\|896790_897330_+\|RNA-polymerase-sigma-factor	gnl\|CDD\|224511	COG1595, RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription].	2.36306e-36
NZ_LS483354.1\|WP_012515447.1\|886760_887570_+\|class-C-sortase	gnl\|CDD\|320676	cd05827, Sortase_C, Sortase domain found in class C sortases. Class C sortases are membrane-bound cysteine transpeptidases broadly distributed in Gram-positive bacteria (mainly present in Firmicutes and Actinobacteria). They function as pilin polymerases responsible for the assembly of pili, which are multi-subunit hair-like fibres that extend from the cell surface to promote microbial adhesion and biofilm formation. First, one or more class C sortases form the long thin shaft of the pilus through linking together pilin subunits via isopeptide bonds. The base of the pilus is then anchored to the cell wall by a housekeeping sortase or, in some cases, the class C sortase itself. Depending upon the organism both the number and type of sortase enzymes involved varies, and in some cases, accessory factors appear to be needed. In three-component spaA pilus from Corynebacterium diphtheriae, the prototypical class C sortase (named Cd-SrtA) catalyzes polymerization of the SpaA-type pilus, consisting of the shaft pilin SpaA, tip pilin SpaC and minor pilin SpaB. The pilus shaft is then attached to the cell wall by a housekeeping class E sortase, Cd-SrtF. In the absence of Cd-SrtF, Cd-SrtA attaches the pilus to the cell wall, albeit at a reduced rate. Cd-SrtA can recognize two distinct sorting signals (LPLTG in SpaA and SpaC, and LAFTG in SpaB) and it can employ lysine residues that originate from different proteins (either Lys190 within the pilin motif of SpaA or Lys139 in SpaB). However, Cd-SrtA cannot be able to polymerize the major pilin subunit SpaH, even though it contains LPLTG motif. In two-component pili of prototypical Bacillus cereus, the class C sortase (named Bc-SrtD) cleaves related sorting signals within a major pilin protein BcpA (LPVTG) and a minor tip pilin BcpB (IPNTG), and catalyzes a transpeptidation that joins the threonine residues in each signal to the side-chain of Lys162 in BcpA (located within a pilin motif). Unlike the SpaA pilus in C. diphtheriae, in B. cereus Bc-SrtD is unable to covalently attach the pilus to the cell wall without the help of the housekeeping sortase.	3.70926e-79
NZ_LS483354.1\|WP_012515457.1\|898791_899469_+\|DUF4956-domain-containing-protein	gnl\|CDD\|379819	pfam16316, DUF4956, Domain of unknown function (DUF4956). This family consists of uncharacterized proteins around 220 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown.	4.67441e-08
NZ_LS483354.1\|WP_041785439.1\|904807_908029_+\|ATP-dependent-nuclease-subunit-B	gnl\|CDD\|274291	TIGR02774, putative_ATP-dependent_exonuclease_subunit_B, ATP-dependent nuclease subunit B. DNA repair is accomplished by several different systems in prokaryotes. Recombinational repair of double-stranded DNA breaks involves the RecBCD pathway in some lineages, and AddAB (also called RecAB) in other. The AddA protein is conserved between the firmicutes and the alphaproteobacteria, while the partner protein is not. The partner may be designated AddB, as in Bacillus and in alphaproteobacteria, or RexB as in Streptococcus and Lactococcus. Note, however, that RexB proteins lack an N-terminal GxxGxGK[ST] ATP-binding motif found in Bacillus subtilis and related species, and this difference may be important; this model represents specifically RexB proteins as found in Streptococcus and Lactococcus. [DNA metabolism, DNA replication, recombination, and repair].	0

>NZ_LS483354.1|WP_111721666.1|892785_896502_+|pullulanase
MMKRLRENQALFEERQLFGIRKLKLGVASVAIATAFSLGTVSGQITAAAESLTSVEPIDGAVMVKSEAADHDSKELPEATDISDISGISDVTKVSAAVNADTVKEVQPVAVPLVEDQAQEETTDQSQPSSSIVPVTTDSSLETPEATSSEAPIAAQTLRLHFKTLPAQDLSSLGLWVWDDVETPSDQLGGWPTGATNFSLAKTDDYGYYMDVKLSAEQAHKVSFLINNTKGDNITGDRTVELISPKVNEVWIDGQELSYYPPLAQGYIRINYYRSDGHYDNKSLWLWGSADASMTSQQGAWPDGIDFKQVGRYGAYIDVKLADFNELGFLLLDERQTGDAVKIQPNDYIFKDLKNHTQIFLKDEDPTIYTNPYFVNHVRLIGAKQVSPSSIEASFTTLADVDKESLLKELKISTDSKEAVAITDITLDEKTHKAVITGDFSQAVATYTVTFHHESFQARPNWQYKDSLYAYDGELGARVREAGAKVDLTIWSPSADKVSLVLYDKADQTKVIGNFALAKGDKGEWSITLSADSGLGISDYRGYFYHYEITRDGKSVLVLDPYAKSLAAWNSELAKTDPSYKVAKAAIVDPAAIGDKELAFADIKGFHKREDAIIYEAHVRDFTSDQAIANDLKAQFGTFAAFVEKLDYLKELGITHVQLLPVMSYYFVNELANKERMLTYSSSDNNYNWGYDPQSYFALTGMYSTDPTDPAKRIEEFKQLVNEIHKRGMGVILDVVYNHTANVDIFEDLEPNYYHFMNADGTARTSFGGGRLGTTHYMSRRVLVDSITYLVDEYKVDGFRFDMMGDHDAAAIEKAFLAAKALNPNIIMLGEGWVTYQGDEHMPEQPADQSWMSQTDTVASFSDDFRNQLKSGFPNEGSPAFITGGARDIMTIFHNIKAQPTNFLADDPGDVIQYIAAHDNLTLFDIIAQSIKKDPSVAANAAEIHRRLRLGNLLVLTSQGTPFLHAGQEYGRTKQFKDEAYKGKVADDKVPNKSHLLVNEDGTPFEYPYFIHDSYDSTDAINHFDWAKATDTERYPESTTSQAFTKGLIALRRSTDAFRLASKAEIDQKVKLITVPNEHGIKAQDLVIAYQTIASNGDVYAVFVNADSNDRTIRLTGKFQALLAGEVIVDAKQAGTEALASPEGVVLTKDGVKLSGLTATIIRLRASQSDKGTLGAMTDQAAHHQEKLVAAQTAGEVSQFSAKTLPKTGTSQLDALLALAGSGILAGLGGLVSKSKRR
>NZ_LS483354.1|WP_012678093.1|891222_891678_-|hypothetical-protein
MVKHAKTNLHFELERSISRKVDSKLIAYQVSLSDGFYDKYTKLWDKTYSFDFVINHRAFYAQLTKRCVYDVLLQTLEKISRKAIAKQLAELEALVDVSESKEDFQIFFEKKYKLSFPDLKNCVYPKKKELSDFDQNLWIALHYNPRKERDT
>NZ_LS483354.1|WP_012515451.1|890935_891223_-|hypothetical-protein
MTTWYDYMVRASEHAGSDGDLWFRYLYKIIKDGETKLTTDDVEQLLKNPNLTPFQKVTLQDALTEGTHTREHVLQANRKSQPKDILKLFREGNYG
>NZ_LS483354.1|WP_012515450.1|890394_890943_-|hypothetical-protein
MDKKILFKALNTELAKENISLDIICVGGFVLEYYNLRGTQDVDAFYQESVNIRQMIKKVGDEFGVNEPDELWLNNSVANLNRIPPKTICETVFHYSNLIVLVPPLSYILGMKLESGRDRDRQDAGDIIKLANIRSPKKLINTLEEYGFQPDISMILEVFEIAYGMEWLANYMSEHPEEFRYY
>NZ_LS483354.1|WP_111721665.1|889142_890225_+|LPXTG-cell-wall-anchor-domain-containing-protein
MLTNQTGYRHRLSKQKLPISMVSCLLGMGVFISPTSISADSPPTITIKSAADKDISSNLPKVPLSNAKPEEKLEDTPQLPNEKGQGDDIREPEKLPELPNEKGQGDDIREPEKLPELPNEKGYGNDIRKPEKTPELPNEKGQGDDLKKEEDLKKQRKELTEQLRALDTVEKVLEFLRKPIPGFVTDEDWNFLVSFVEKGPENKTFEADKLKLLEIYSTSKGHRVWLGYLILEEPKPEPMPKPEPMPKPKPMPEPKPMPKPEPMPKPEPMPKPEPMPKPKPKPMPKPEPMPKPEPMPKPMPKPEPMPKPEAQKGDKPAVPKAMEHKLPSTGEATAPFFTAAALAVLASLGVAVVSRKRKKH
>NZ_LS483354.1|WP_165626699.1|887881_889063_+|YSIRK-type-signal-peptide-containing-protein
MMKKQSFTHSRKPKFGMRKLSIGLASCMLGMMFLTTSHVSGEVVEVWPYGQNPNGKTEILSQTEDSESLQRLRDIEDFQAEKKMQNVVYTKWLDGVDVKDHDFRKIVDGNIAYYATPLLNGRGFYDINKDFNRDSDKCAAAVAANMFHYWLDINRDNVDRFLRQNPEKHGIIELPDGQLKLSDFLNTYESDHGYRDKSKLFDFISNNFNGPVWTDKLLDNYINGYAYNYKYGRTIEDPTKNTSKINFFKEVFNEKILTNNHSIRNQNEFSVLLSEALYTGKAIGLSYGPAGLRHSLGHIISVWGADLDADGNVVAIYVTDSDDKKLTIGDERVGLKRYKISTDDENRLRLTAYEETHNTGGQIRGLWTLDTGKYAWADYFDKTEQTGTDQAEQ
>NZ_LS483354.1|WP_012515447.1|886760_887570_+|class-C-sortase
MKKSVIFWSVILVAGCLIVLYPTLSNYWNAQHQSQLIADYISSTQALRHKDSQLMLEAANQYNQQLKANHDPDLTLTDSETEAYQQQLDLTNTGIMAYIDIPKVHERLPIYHGTDEEILQVAIGHLAGTSLPVGGKGTHAVISGHRGLPSAKLFTNIDKLRINDTFTITSLNRTMTYQVDKIATVLPDDVSLLRIEEGKDLVTLVTCTPYGVNTHRLLVRGHRIKTATPAAARGSQKPSRLILWLLLISALGLSLVLIGTWRWRRRSKA
>NZ_LS483354.1|WP_012515446.1|885243_886680_+|isopeptide-forming-domain-containing-fimbrial-protein
MKTIKLILTSLLVTFLTMLSGKAFADTASYTITVEEATAGHTYEAYQIFKGDLFDSTLSNITWGGGVTPFEFDGSKDAAKIAEGLKEANAAAFAKEAGKHLTATIAGTGTHAITVNEAGYYLIKDKNDSQTGKHDAYTSFVLKVVKNTSFKPKSAIPTVLKKVKDRNDKTGLETDWQDSADYDKNDKVPFQLTATLPSNYDAFQEYYLEFVDTLSKGLSYNKDAKVYVINGDSRQDITGSFTINESGSSFKINNLKTVTDVTADSKIVVEYTATLNDQAAIGKKGNPNEVALKYSNDPNALGKGEESPKGETPKDKVIVFTYKTIINKVDQDQKALKGAGFTLYKLVKGDNGEEKYQIVQEIKAGDTTSFEFVGLDAGDYKLSETTTPGGYNTIADVMFSIVAQHETESDDPQLTSLTVDKATGFTTDTEAGTVSATIVNKKGSILPSTGSIGTTMLYVFGVMLMTISTLFIFRQKQQ
>NZ_LS483354.1|WP_041785432.1|883264_885229_+|Cna-B-type-domain-containing-protein
MKQLTKIVSVVLLLVFTLSASLHKVRATNLSDNITSLTVASSSLRDGERTTVKVEFDAKSAKIKEGDIIEVTWPTSGNIYIQGFTKTIPLMINSINVGTLDVTLDKAVFRFNKNIETMQNVTGWGEFEITVRNVTQTTTETTGTTTVRVGNHTATINVTKPEAGTGTSSFYYKTGDMQPDDTDHVRWFLLINNNKEWVANTVMVEDDIQGGQTLDMTSFDITVSGYRNERFVGEKALEEFRQKFPNSVITATANHISVRLDQYDASQNTVNVAYKTKITDYDQKEFANNSKIWYQILYKNQVSGQESNHQVANVNANGGVDGSRYTSFTVKKIWNDKENQDGKRPKNIKVQLYANNKEVEGKAIELNDSNSWQASFGKLDKYDNQNQKITYSVKEVTVPTGYQSQVEGDSGAGFTITNTYTPEMISITGQKTWDDKENQDGKRPDQITVRLLANNVETGDVTTASVKTGWKYTFTNLPKYKDGKQITYTIQEDPVADYTTTIQGFDITNHHEVALTSLKVIKAWNDKDDYYHKRPKEITILLKADGKVIREHQMTPDQQGKWEYTFDKLPVYQAGKKISYSIEEKQVAGYQAPVYEVNEDLNQVTVTNTINQSYSLPDTGGQGVKWYLLIGGSIITVACLVLINLYKKHKHHNM
>NZ_LS483354.1|WP_111721664.1|881330_882440_+|YSIRK-type-signal-peptide-containing-protein
MAKKEMKFYLRKSAFGLASVSAALLVSSAVVAADTADSAAPAVTATVKDSSADKEATALKAEADLATAKADLAAAEAAITAAKAEYETAQADLATADATIASLEQKMAELESKIQEKQKELEDIIRQQGPAHAAIGGRNGDADAEQLDELAGEVSRAKAALKVELQKVKEELEVAKRAYAGIEERKQVAAAKLDAANKAFAGVEEKHAQAMVAFEEAFAAYKEAVKAELKAAGASDFYTKKIDSANTVDGVKTLREMILDSIAKPEVEPEAKPEPKPEPKPEPKPEPKPEPKPEPKPEPKPEPKPKPQPKPAPAPKPEAKKEEKKAAPKQDANKLPSTGEATNPFFTAAALAVMAGAGVAAVSTRRKEN
>NZ_LS483354.1|WP_012515454.1|896790_897330_+|RNA-polymerase-sigma-factor
MIKGVLRGDKLLEFEDIYLEYKDDVYRFVNKLCCYQNSLSDDITQETFLKAYRNIAKFRGDSSIKTWLFTIAKNTFFSEIKKKKYENMSMESLEIVDAKGHDEPLDKIARRELLEITLTIIFNLPEKMQAVFLARIYSGDSYEKIAKDIGITVSSAKVLVFRARKHIKRQLREEYGYEV
>NZ_LS483354.1|WP_041785436.1|897319_897955_+|zf-HC2-domain-containing-protein
MRYDCELIQDLLPLYVDDTLSDYSRAVVEAHLTSCKDCQTDLADLRQDYSKVEEELQEYQAEVCAFSRFIRKQRQQMIVATISICLVTGILSSILTAHRIRAPYDYVAIDVGEHTQLNKEGLLSTARTTAKDHVALVYKHKAQKVNGSFEISELQARKIQQQLKQAMLKEANATDISSRQLDQSQKRLSCNQDDQLVYIISTDGRIYYFGR
>NZ_LS483354.1|WP_111721763.1|898082_898778_+|polyphosphate-polymerase-domain-containing-protein
MNEVLRQEKKYLITIEDYYRLSHEFSKLLRLDAHSSSEGYVIRSLYFDSLEDVDWQEKEDGIELRRKIRLRNYGSQSSFAKLEMKQKQGSNQKKRSLRLTRADAQLLIKGDKSILLTYPDRFAAECYSRMSMQLYQPKTVIEYQRKAFVAKENNIRITFDHHIIGSETNADIFSDHLPQNYLLDPYLVILEVKYNGFLLSYIKKLLESVNGSELSASKYCMGRAISKHYRF
>NZ_LS483354.1|WP_012515457.1|898791_899469_+|DUF4956-domain-containing-protein
MKQLLRHVFEQRGTLSFQDVLLHIVAAALLSIVIYMSYAYTHTGTAYSKKFNVSLMTLTVLTATVMTVIGNNVALSLGMVGALSVVRFRTAIKDSRDTVYIFWTIVVGICCGVGDYTVAATGSSVIFLLLLLMGAVRNDNRLLLIVRCDKQMEIELERLVFNYFSGKAIQRVKNTTSDDIEMIFELSRKDYDSTYQQANPLTEAVYQLGRVDYFNIVSQSDDITG
>NZ_LS483354.1|WP_012515458.1|899474_900908_+|CotH-kinase-family-protein
MKEKTIYVIVLVCLLLAAICGIGFPKTSAKRIHHHLQTVKKSSRSTGEFSSHLPIISIDTHHQQIPEQREYEGETKRQKTIKTTVSLRDQLDREHSLSESPRLSLTALIAYRGNSSRHFDKKSLKLRFINKSAKPKAVSLAGMSKESEWVLHGPFLDRTLVRNYLSYNIAGEIMTYAPNVRYCELVVDHQYCGLYLAVESIEQGRHRVNIEKSDRKSDKTPYILVWDRRHKAKQALDHYVSYTNQAGLSSLDIKYPSLHRLTPKQKQFIEKDISHIEKLLYSYDLKQYTDYLDQESFADYFIINEFFRNIDAGKFSTYLYKDLRDKLKLVVWDFNNAFDNQIEAPYDEADFTLSDAPWFCMLLKDPSFVKLVVTRYHQLRQNVLSTDYLIKYIDATVAFLGPAIQRNYHKWGYVFTVPSRSDATNYLVPASRNYSSYEASVKQLKDFIRRRGRWLDKHIETLYQYSAPSKNTNTLLE
>NZ_LS483354.1|WP_012515459.1|900914_903056_+|hypothetical-protein
MKKYLIFVGLLLSVIGLSYYCCDIDGRLYLPVSNQSAIRTSFYAKDKRIYDQKGSPYLIKGVDVESSIAGYRQRDLSVDEKTYYRWFKQIAAMGANTIRVRVIMPAAFYHALSRYNDTASHSLYLLQGFRIDAYHDNSSISALDKAYLGTLLREARASVDVIHGRKRIWHSDLGLQHYDQDMSKWLIGYIVGDDWHSGTIAYTNHQNHAKPVGFKGRYYATTPQANRFEAILAEIMEEITSYESRKYGWQHLVSFSNTPQSDPFVYQDPFASQAAKYVQLTIENIKPSAKVKAGLFASYKLLDCHSAYRDYLLFDRLGLDDRLVGDIKRMPLYQGYVKLLTSYHRVPVVVTGYGYSTARGVDQMISTSSPLTEKDQGERLMADYTAFIASGCCGATIHSWQDDWTARSWNTSFATNRHQGFLWGDVQSKAQGYGLLTFEHAPRTHAIDGQKAAGEWSRALTYRKNGQQLLVDQDEKYLYIAIESTKKQPLQRQWLIPLDITPKTGSRVIEGFSARFDRFADFALVVDDHKGSRLLVQERYHATDANYLRQINGKDFYVFPPNKHTPRFTMVDMVMRNDGIFAAIDQVPIAKRGLKRYLTGQLKKGNGNRGSAHFDSQTDISFGEHLIELRIPWQLLNFSDPASNKIHDDYFEHYGVEELAIEAIAIGFAPLKESKVITMVEYPLLSWERPRVREVLKTSYQQVQAVWQEKRRK
>NZ_LS483354.1|WP_165626701.1|903196_904597_+|glycosyltransferase
MIVQLLFLVLKYSQYLFLAFLIAYASFLLLSLIVGAIHLYERRQQVPLGGDVSLPPVSILVPAYNEELTIIETVESLLMLDYDCYEIIVIDDGSTDHTAKLLKEQFHLEAVTCSINQRIPTRPLKAVSQKQLKHVKLTLLEKANGGKGDSLNFGINAAQYDYFLCMDADSMLQEDSLKRIAKTVAKDPSVIAVGGMVKVSQGVALAAGRIVDYHLPRQLISCAQAIEYDCAFFGARVLLDQAAGNLIISGAFGLFKKELAIAVDGYDTGTLGEDMELVMKLHFFCQNNKIPYRIGYETDAICWSQAPSRLKDLCQQRRRWFLGLYQCLKKYLQFFVSGRFKVTVLISYVLYLLFELLSPFIEAFGVTIIVLSLLCHQLNTTFFVSLMLLYICYCVLIALTSFLNRVYSQNNSSITFFDMVWVIYAAIYQCLVLHTVLTLVKVSSFIGYQRKKNAWGQITRDKHKVA
>NZ_LS483354.1|WP_041785439.1|904807_908029_+|ATP-dependent-nuclease-subunit-B
MKLLYTEISYSMTEILVKEARAYADKGYRVFYIAPNSLSFEKERSVLALLPEQGSFAITVTRFEQMARYFTLAKAANRQALDDNGLAMIFYRVLMQLQEDELKVFHRLRTDQAFIAQLVELYKELQAANLTAFDLTTLDRPEKQEDLITIMTKAEQLIAQGDYDQSSRLAQLAEAIKSKSLDDELRQTVLVIDGFTRFSAEEEQLLALLNEACEEIVIGAYISQKAYRLAFTKGNLYEASLAFIQQLAQQFQTKPIYTTSEKVFDVSFSRLTQLLEANHDYSQLDWQLSAKDKSKVVIWQALNQKEELEHVTKAIREKLYQGYRYKDMLVLLGDVASYQLQIGPIFEKFEIPYYIGKQEPMSAHPLVQFVESLERGRRYNWRREDIVNLLKSGLFGRFQEGELDQLEQYLVFADIQGFTKFSRPFTLNSSRQYPLPLLNQLRLAVVTPLQQLFKSQKQLGASLLDKLMTFFKTIQLADNFEALAGSRREADREKDEEVWKTFTGILETFYQVFGQEKMTLADCLALIKMGMQTAHYRTVPATLDVVSIKSYDLVEPHSKPFVFAIGLSRSHFPKQTKNTSLISDQERASINEQTASYQRLDVPSFENIKKNHQTALSLFNAATQELVLSLPTSLTNSSDDVSPYLKELIALGVPVIEKGKNRLSHSAADIGNYKALLSRLVAINRQGIADDMTSEDRNFWTVALRYLKRRLADEQLSLPAFEHHLTTKPVAPEVIETRFPSQQPLSLSSSALTVFYNNQYKYFLKYVLGLQEPESIHPDARIHGQYLHRIFELVTKDRSNAAFDQKLGAAIAAVNQQSAFQQVYQADAEGRYSLEVLKGIAYSTAPVLNLNQGMQVAKQEEAFELALGHQALIRGVIDRIDQLADGRLGIVDYKSSARVFDIGAFYNGLSPQLVTYLAALKNKGQGLFGAMYLHMQEPRLSLSDFKVLDDQLVAAAYKELTYKGIFLAQAKEYLANGSYHLNNTLYETDELETLLAYNEQLYLSAVKQIKTGHFLINPYTADGKSVQGDQLKAITRFEADLDLGYARRLVVLPAKERRQAFLTRMNEEIKHED
>NZ_LS483354.1|WP_111721667.1|908018_911663_+|helicase-exonuclease-AddAB-subunit-AddA
MRIDEGFLTPEAIARLQQEEALSDKRHKRTAQQIEAIYSSGQNILVSASAGSGKTFVMVERILDKILRGISVDRLFISTFTVKAATELIERIEKKLHTAIAETQDYQLKAYLNDQLQALSQADIGTMDAFAQKLVHQHGYVLGISPHFRIIQDKAEQDILKREVFRQVFEDYMSQTDNKAFIQLVQNFSGRRKDSSAFREIVDSIYAFSQSTANPSSWLAEVFLRGAKTYTSFADIPDQVVDALLACMQDTADQLRDLTDMEGYAQTTKAGKLTAKYTKHLKMIDNLYEWASHFDSLYGKERLGQLAQELTALLPSGADITVAGHKYPIFKSLQEQLVGFRHLETILAYQQESLPLLEVLQAFVISFSEAYLAAKMQENAFEFSDIAHFAIEILQQAPDIRQAYQGHYHEVMVDEYQDNNHMQERLLELLSNGHNRFMVGDIKQSIYRFRQADPQIFNQKFKDYQSNPEHGKLILLKENFRSQSEVLNVTNAVFSRLMDESLGEITYDDKHQLVAGSEAQKQLHPENRAQLLLYNTDQAQEGTEEASTNDGISAGEVTLVAKEIIRLYNEEKVAFEDITLLVSSRTRNDTIFQVFNQYGIPLVADGGQENYLKSVEVMVMLDTLRSINNPLNDYALVALMRSPMFSFDEDQLARISLQSSSQDQPQAFYDKLSNSLRGQGEHPGLIGQELMTKLVDFDRTLRDWRQFAKLHSLYELIWKIFNDRFYFDFVASQPKAEQAQANLYALAIRADQFEQSGYKGLSRFIGMIDKVLETQNDLADVEVERPKHAVNLMTIHKSKGLEFHYVFILNCDKRFAMADLQAPIILNRDEGIGIKYVANVKELLRDEKLASLKVTMETLPYQLNKQQLRLATLSEQMRLLYVAMTRAEKKVYLVGKASKEKIQAKTADNSSEGRLALASRERLLSFQDWLLAITATFSKEDLFIDVRFVDDSDLTAEAVGQLRSSGLLQADDLKDNRQTEDIARALDMLDKVSKLNASYQAAIELPTVRTPSQLKTLYEPLMDTDGVDIIDQPYHRPKSFELPDFSKKKAVEPSQVGSSLHELMQRIPMSDQITAGDIEQALQLVSADAEVKARLDIKKVTAFFATTELGKLLQEHHQRLYREAPFAILKKDSLSQEQYVVRGIIDGYLLFEDRIVLFDYKTDRYQQSAELKQRYQQQMDLYAEALSQSYGIARVEKYLVLMGGSQLEVVRLDE
>NZ_LS483354.1|WP_012515463.1|911928_913044_+|aminotransferase
MKLPVFGVEEWLNQHEKRAVYDIAGSSIASLTLEELFDLTQEQPQAFYQQLHQKPLDYGWIEGSPDFKQAVAGLYQQQKARNILQTNGATGANFLVIYALLEAGDHVIAHYPSYQQLYDIPASLGVEVDYWQIREEQAWLPDLNELGAMIRPNTKMIMINNANNPTGAYMTKPYLEELINIAREHDIYLLSDEVYHSFTSDHLLAVADLYDKGITVNSMSKTFSIPGIRVGWVAASETICDQLRLYRDYTMICAGVFDDMVASLALKHADKLLQRNQAIIRTNLAILEDWITGEAKASYIRPREVSTAFVRLDIDEDIEAFALRLLEDYGTLVVPGNRFNQANHVRIGYCCQPQVLQAGLSRLSQCLKNIQ

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Crispr_ID: NZ_LS483354_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LS483354_4

918060-918131

Orphan

Consensus_repeat	Method
CCTTTTTAACGGCGAGCTAAAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LS483354_4

>merge|NZ_LS483354|4|918060-918131|CRISPRCasFinder
CCTTTTTAACGGCGAGCTAAAAATAGGAGACGAGCCCGAAATAGGGTGTCCTTTTTAACGGCGAGCTAAAAA

>NZ_LS483354|4|4|918060-918131|CRISPRCasFinder
CCTTTTTAACGGCGAGCTAAAAA	TAGGAGACGAGCCCGAAATAGGGTGT
CCTTTTTAACGGCGAGCTAAAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LS483354.1\|WP_012515467.1\|916935_918045_+\|RNA-polymerase-sigma-factor-RpoD	unknown	unknown	gnl\|CDD\|236413
NZ_LS483354.1\|WP_012515465.1\|914494_914869_-\|large-conductance-mechanosensitive-channel-protein-MscL	unknown	unknown	gnl\|CDD\|376605
NZ_LS483354.1\|WP_012515470.1\|919848_921003_+\|DUF1972-domain-containing-protein	unknown	unknown	gnl\|CDD\|340858
NZ_LS483354.1\|WP_012515476.1\|926738_927428_+\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|133022
NZ_LS483354.1\|WP_012515473.1\|922730_923939_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224057
NZ_LS483354.1\|WP_012678074.1\|921927_922731_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224596
NZ_LS483354.1\|WP_012515459.1\|900914_903056_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LS483354.1\|WP_012515474.1\|923959_924967_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133039
NZ_LS483354.1\|WP_111721667.1\|908018_911663_+\|helicase-exonuclease-AddAB-subunit-AddA	unknown	unknown	gnl\|CDD\|274299
NZ_LS483354.1\|WP_012515469.1\|918875_919724_+\|dTDP-4-dehydrorhamnose-reductase	unknown	unknown	gnl\|CDD\|367904
NZ_LS483354.1\|WP_165626701.1\|903196_904597_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133045
NZ_LS483354.1\|WP_021320668.1\|918396_918735_+\|metal-sulfur-cluster-assembly-factor	unknown	unknown	gnl\|CDD\|225062
NZ_LS483354.1\|WP_012515466.1\|915115_916927_+\|DNA-primase	unknown	unknown	gnl\|CDD\|235551
NZ_LS483354.1\|WP_000048058.1\|914090_914267_+\|30S-ribosomal-protein-S21	unknown	unknown	gnl\|CDD\|234707
NZ_LS483354.1\|WP_012515475.1\|924963_926709_+\|alpha-L-Rha-alpha-1,3-L-rhamnosyltransferase	unknown	unknown	gnl\|CDD\|226277
NZ_LS483354.1\|WP_012515463.1\|911928_913044_+\|aminotransferase	unknown	unknown	gnl\|CDD\|235989
NZ_LS483354.1\|WP_012515477.1\|927432_927789_+\|DUF2304-domain-containing-protein	unknown	unknown	gnl\|CDD\|378376
NZ_LS483354.1\|WP_012515464.1\|913111_913924_+\|transporter-substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|270338
NZ_LS483354.1\|WP_012515471.1\|920992_921928_+\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|133039
NZ_LS483354.1\|WP_041785439.1\|904807_908029_+\|ATP-dependent-nuclease-subunit-B	unknown	unknown	gnl\|CDD\|274291

Protein	Function_ID	Function_description	E-value
NZ_LS483354.1\|WP_012515467.1\|916935_918045_+\|RNA-polymerase-sigma-factor-RpoD	gnl\|CDD\|236413	PRK09210, PRK09210, RNA polymerase sigma factor RpoD; Validated.	0
NZ_LS483354.1\|WP_012515465.1\|914494_914869_-\|large-conductance-mechanosensitive-channel-protein-MscL	gnl\|CDD\|376605	pfam01741, MscL, Large-conductance mechanosensitive channel, MscL.	2.85357e-44
NZ_LS483354.1\|WP_012515470.1\|919848_921003_+\|DUF1972-domain-containing-protein	gnl\|CDD\|340858	cd04955, GT4-like, glycosyltransferase family 4 proteins. This family is most closely related to the GT4 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in certain bacteria and Archaea.	0
NZ_LS483354.1\|WP_012515473.1\|922730_923939_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224057	COG1134, TagH, ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane].	4.65989e-124
NZ_LS483354.1\|WP_012678074.1\|921927_922731_+\|ABC-transporter-permease	gnl\|CDD\|224596	COG1682, TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane].	5.05315e-55
NZ_LS483354.1\|WP_012515476.1\|926738_927428_+\|glycosyltransferase-family-2-protein	gnl\|CDD\|133022	cd04179, DPM_DPG-synthase_like, DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the existence of adapter molecules for membrane anchoring. This family also includes bacteria and archaea DPM1_like enzymes. However, the enzyme structure and mechanism of function are not well understood. The UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate. This protein family belongs to Glycosyltransferase 2 superfamily.	7.30765e-47
NZ_LS483354.1\|WP_012515474.1\|923959_924967_+\|glycosyltransferase	gnl\|CDD\|133039	cd04196, GT_2_like_d, Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.	1.23447e-25
NZ_LS483354.1\|WP_111721667.1\|908018_911663_+\|helicase-exonuclease-AddAB-subunit-AddA	gnl\|CDD\|274299	TIGR02785, ATP-dependent_helicase/nuclease_subunit_A, helicase-exonuclease AddAB, AddA subunit, Firmicutes type. AddAB, also called RexAB, substitutes for RecBCD in several bacterial lineages. These DNA recombination proteins act before synapse and are particularly important for DNA repair of double-stranded breaks by homologous recombination. The term AddAB is used broadly, with AddA homologous between the Firmicutes (as modeled here) and the alphaproteobacteria, while the partner AddB proteins show no strong homology across the two groups of species. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_LS483354.1\|WP_012515469.1\|918875_919724_+\|dTDP-4-dehydrorhamnose-reductase	gnl\|CDD\|367904	pfam04321, RmlD_sub_bind, RmlD substrate binding domain. L-rhamnose is a saccharide required for the virulence of some bacteria. Its precursor, dTDP-L-rhamnose, is synthesized by four different enzymes the final one of which is RmlD. The RmlD substrate binding domain is responsible for binding a sugar nucleotide.	3.77312e-128
NZ_LS483354.1\|WP_165626701.1\|903196_904597_+\|glycosyltransferase	gnl\|CDD\|133045	cd06423, CESA_like, CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the elongation of beta-1,2 polyglucose chains of Glucan.	1.02982e-55
NZ_LS483354.1\|WP_021320668.1\|918396_918735_+\|metal-sulfur-cluster-assembly-factor	gnl\|CDD\|225062	COG2151, PaaD, Predicted metal-sulfur cluster biosynthetic enzyme [General function prediction only].	5.89806e-42
NZ_LS483354.1\|WP_012515466.1\|915115_916927_+\|DNA-primase	gnl\|CDD\|235551	PRK05667, dnaG, DNA primase; Validated.	0
NZ_LS483354.1\|WP_000048058.1\|914090_914267_+\|30S-ribosomal-protein-S21	gnl\|CDD\|234707	PRK00270, rpsU, 30S ribosomal protein S21; Reviewed.	9.89287e-11
NZ_LS483354.1\|WP_012515475.1\|924963_926709_+\|alpha-L-Rha-alpha-1,3-L-rhamnosyltransferase	gnl\|CDD\|226277	COG3754, RgpF, Lipopolysaccharide biosynthesis protein [Cell envelope biogenesis, outer membrane].	0
NZ_LS483354.1\|WP_012515463.1\|911928_913044_+\|aminotransferase	gnl\|CDD\|235989	PRK07324, PRK07324, transaminase; Validated.	0
NZ_LS483354.1\|WP_012515477.1\|927432_927789_+\|DUF2304-domain-containing-protein	gnl\|CDD\|378376	pfam10066, DUF2304, Uncharacterized conserved protein (DUF2304). Members of this family of hypothetical archaeal proteins have no known function.	1.12542e-20
NZ_LS483354.1\|WP_012515464.1\|913111_913924_+\|transporter-substrate-binding-domain-containing-protein	gnl\|CDD\|270338	cd13620, PBP2_GltS, Substrate binding domain of glutamate or arginine ABC transporter, a member of the type 2 periplasmic binding fold protein superfamily. This family comprises of the periplasmic-binding protein component (GltS) of an ABC transporter specific for glutamate or arginine from Lactococcus lactis, as well as its closely related proteins. The GltS domain belongs to the type 2 periplasmic binding protein fold superfamily (PBP2), whose many members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space as a primary receptor. The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two receptor cytoplasmically-located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	8.99433e-90
NZ_LS483354.1\|WP_012515471.1\|920992_921928_+\|glycosyltransferase-family-2-protein	gnl\|CDD\|133039	cd04196, GT_2_like_d, Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.	3.11823e-86
NZ_LS483354.1\|WP_041785439.1\|904807_908029_+\|ATP-dependent-nuclease-subunit-B	gnl\|CDD\|274291	TIGR02774, putative_ATP-dependent_exonuclease_subunit_B, ATP-dependent nuclease subunit B. DNA repair is accomplished by several different systems in prokaryotes. Recombinational repair of double-stranded DNA breaks involves the RecBCD pathway in some lineages, and AddAB (also called RecAB) in other. The AddA protein is conserved between the firmicutes and the alphaproteobacteria, while the partner protein is not. The partner may be designated AddB, as in Bacillus and in alphaproteobacteria, or RexB as in Streptococcus and Lactococcus. Note, however, that RexB proteins lack an N-terminal GxxGxGK[ST] ATP-binding motif found in Bacillus subtilis and related species, and this difference may be important; this model represents specifically RexB proteins as found in Streptococcus and Lactococcus. [DNA metabolism, DNA replication, recombination, and repair].	0

>NZ_LS483354.1|WP_012515467.1|916935_918045_+|RNA-polymerase-sigma-factor-RpoD
MAKEKEVTTFNVQVAEFIRHHKKEGTATDDEVTEKLVIPFTLDADQIDDLLERLTDGGISITDKEGNPSSKYVVEEPKPEELTDEELIGSNSAKVNDPVRMYLKEIGVVPLLTSDEEKVLAVAVAAGDMEAKQRLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVDKFDYSKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVREQRNLLQELGQDPTPEQIAERMEMTPDKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDEVIENPVDYTTRVVLREQLDEVLDTLTDREENVLRLRFGLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRHPSRSKQLRDFIED
>NZ_LS483354.1|WP_012515466.1|915115_916927_+|DNA-primase
MGFLWGGDGLAIDKEMISQIKHNVNIVDVIGEVVHLSRTGRHYLGLCPFHKEKTPSFNVIEDRQFFHCFGCGKSGDVFKFIEEYRQVPFLESVQIVADKAGMAVTIAPSQASLGQKQHPHQALIDLHEDAAKFYHAVLMTTKIGQRAKEYLYQRGLDDQLIEHFRIGLAPNEMDYLYQALSKKYTEAQLTASGLFHVSEQSNAVYDAFRHRIMFPLCDDKGNMIAFSGRIWAREDIEKQQAKYKNSRATVLFNKSYELYHLDKAKPIIAKTHEVFLMEGFMDVIAAYRAGYGNAIASMGTALTPEHVRHLKQLTQRVILTYDGDDAGQNAIAKSLELLTDFQVEIVKIPNRMDPDEFVQQHSPEALAKLLQHSRISSVEFLIDHLKPENMDNLQSQIAYVEHISQIIAQAPSITAQNSYINKVADLLPDFDYFQVEQSVNALRLQDRQSLQGQTSQSKASLVTLPINKSMTALAKTESHLLHRLLHHDYLLNEFRHRPDFYFDTPALQTLYEQLKATGQITSYDLSQLSEEVNQAYYRVLEENLPDEIASGEIEDILSRQMTLLKQRELHRQGKQIRESSSKGDHQMALEALERFIAEKRKME
>NZ_LS483354.1|WP_012515465.1|914494_914869_-|large-conductance-mechanosensitive-channel-protein-MscL
MLKELKAFLFRGNIIDLAVAVIVGSAFSAIVTSFVNDIITPLILNPALKAANVENIAQLAWNGVKYGSFLSAIINFLIVGTSLFFVVKVAQKAMPKKGEEEPAKPKTPTQEELLLDIRDLLAKK
>NZ_LS483354.1|WP_000048058.1|914090_914267_+|30S-ribosomal-protein-S21
MSKTVVRKNESLDDALRRFKRSVTKAGTLQESRKREFYEKPSVKRKRKSEAARKRKKF
>NZ_LS483354.1|WP_012515464.1|913111_913924_+|transporter-substrate-binding-domain-containing-protein
MNMKRLLVGALAMVSVLALAACGQTNKTSLQDRIQENGKLVVAVSPDYAPFEFKALVDGKDTIVGADIELAQAIADELGVKLELSAMNFDNVLSSLQTGKADIAISGLSYTKERAKVYDFSEAYYETENAILVKASDAKRYANKDSLAGKKVAVQKGSIEEGLVKEQLNKANCVSLTVMGEAINELKSGQVQAVDLEAPVAAGFLAQHKDLALAPFKLQTGDGDAKAVAMPKGSDDLRQTINKVIKQLNKDGKYKAFIQEAALLTGNAVE
>NZ_LS483354.1|WP_012515463.1|911928_913044_+|aminotransferase
MKLPVFGVEEWLNQHEKRAVYDIAGSSIASLTLEELFDLTQEQPQAFYQQLHQKPLDYGWIEGSPDFKQAVAGLYQQQKARNILQTNGATGANFLVIYALLEAGDHVIAHYPSYQQLYDIPASLGVEVDYWQIREEQAWLPDLNELGAMIRPNTKMIMINNANNPTGAYMTKPYLEELINIAREHDIYLLSDEVYHSFTSDHLLAVADLYDKGITVNSMSKTFSIPGIRVGWVAASETICDQLRLYRDYTMICAGVFDDMVASLALKHADKLLQRNQAIIRTNLAILEDWITGEAKASYIRPREVSTAFVRLDIDEDIEAFALRLLEDYGTLVVPGNRFNQANHVRIGYCCQPQVLQAGLSRLSQCLKNIQ
>NZ_LS483354.1|WP_111721667.1|908018_911663_+|helicase-exonuclease-AddAB-subunit-AddA
MRIDEGFLTPEAIARLQQEEALSDKRHKRTAQQIEAIYSSGQNILVSASAGSGKTFVMVERILDKILRGISVDRLFISTFTVKAATELIERIEKKLHTAIAETQDYQLKAYLNDQLQALSQADIGTMDAFAQKLVHQHGYVLGISPHFRIIQDKAEQDILKREVFRQVFEDYMSQTDNKAFIQLVQNFSGRRKDSSAFREIVDSIYAFSQSTANPSSWLAEVFLRGAKTYTSFADIPDQVVDALLACMQDTADQLRDLTDMEGYAQTTKAGKLTAKYTKHLKMIDNLYEWASHFDSLYGKERLGQLAQELTALLPSGADITVAGHKYPIFKSLQEQLVGFRHLETILAYQQESLPLLEVLQAFVISFSEAYLAAKMQENAFEFSDIAHFAIEILQQAPDIRQAYQGHYHEVMVDEYQDNNHMQERLLELLSNGHNRFMVGDIKQSIYRFRQADPQIFNQKFKDYQSNPEHGKLILLKENFRSQSEVLNVTNAVFSRLMDESLGEITYDDKHQLVAGSEAQKQLHPENRAQLLLYNTDQAQEGTEEASTNDGISAGEVTLVAKEIIRLYNEEKVAFEDITLLVSSRTRNDTIFQVFNQYGIPLVADGGQENYLKSVEVMVMLDTLRSINNPLNDYALVALMRSPMFSFDEDQLARISLQSSSQDQPQAFYDKLSNSLRGQGEHPGLIGQELMTKLVDFDRTLRDWRQFAKLHSLYELIWKIFNDRFYFDFVASQPKAEQAQANLYALAIRADQFEQSGYKGLSRFIGMIDKVLETQNDLADVEVERPKHAVNLMTIHKSKGLEFHYVFILNCDKRFAMADLQAPIILNRDEGIGIKYVANVKELLRDEKLASLKVTMETLPYQLNKQQLRLATLSEQMRLLYVAMTRAEKKVYLVGKASKEKIQAKTADNSSEGRLALASRERLLSFQDWLLAITATFSKEDLFIDVRFVDDSDLTAEAVGQLRSSGLLQADDLKDNRQTEDIARALDMLDKVSKLNASYQAAIELPTVRTPSQLKTLYEPLMDTDGVDIIDQPYHRPKSFELPDFSKKKAVEPSQVGSSLHELMQRIPMSDQITAGDIEQALQLVSADAEVKARLDIKKVTAFFATTELGKLLQEHHQRLYREAPFAILKKDSLSQEQYVVRGIIDGYLLFEDRIVLFDYKTDRYQQSAELKQRYQQQMDLYAEALSQSYGIARVEKYLVLMGGSQLEVVRLDE
>NZ_LS483354.1|WP_041785439.1|904807_908029_+|ATP-dependent-nuclease-subunit-B
MKLLYTEISYSMTEILVKEARAYADKGYRVFYIAPNSLSFEKERSVLALLPEQGSFAITVTRFEQMARYFTLAKAANRQALDDNGLAMIFYRVLMQLQEDELKVFHRLRTDQAFIAQLVELYKELQAANLTAFDLTTLDRPEKQEDLITIMTKAEQLIAQGDYDQSSRLAQLAEAIKSKSLDDELRQTVLVIDGFTRFSAEEEQLLALLNEACEEIVIGAYISQKAYRLAFTKGNLYEASLAFIQQLAQQFQTKPIYTTSEKVFDVSFSRLTQLLEANHDYSQLDWQLSAKDKSKVVIWQALNQKEELEHVTKAIREKLYQGYRYKDMLVLLGDVASYQLQIGPIFEKFEIPYYIGKQEPMSAHPLVQFVESLERGRRYNWRREDIVNLLKSGLFGRFQEGELDQLEQYLVFADIQGFTKFSRPFTLNSSRQYPLPLLNQLRLAVVTPLQQLFKSQKQLGASLLDKLMTFFKTIQLADNFEALAGSRREADREKDEEVWKTFTGILETFYQVFGQEKMTLADCLALIKMGMQTAHYRTVPATLDVVSIKSYDLVEPHSKPFVFAIGLSRSHFPKQTKNTSLISDQERASINEQTASYQRLDVPSFENIKKNHQTALSLFNAATQELVLSLPTSLTNSSDDVSPYLKELIALGVPVIEKGKNRLSHSAADIGNYKALLSRLVAINRQGIADDMTSEDRNFWTVALRYLKRRLADEQLSLPAFEHHLTTKPVAPEVIETRFPSQQPLSLSSSALTVFYNNQYKYFLKYVLGLQEPESIHPDARIHGQYLHRIFELVTKDRSNAAFDQKLGAAIAAVNQQSAFQQVYQADAEGRYSLEVLKGIAYSTAPVLNLNQGMQVAKQEEAFELALGHQALIRGVIDRIDQLADGRLGIVDYKSSARVFDIGAFYNGLSPQLVTYLAALKNKGQGLFGAMYLHMQEPRLSLSDFKVLDDQLVAAAYKELTYKGIFLAQAKEYLANGSYHLNNTLYETDELETLLAYNEQLYLSAVKQIKTGHFLINPYTADGKSVQGDQLKAITRFEADLDLGYARRLVVLPAKERRQAFLTRMNEEIKHED
>NZ_LS483354.1|WP_165626701.1|903196_904597_+|glycosyltransferase
MIVQLLFLVLKYSQYLFLAFLIAYASFLLLSLIVGAIHLYERRQQVPLGGDVSLPPVSILVPAYNEELTIIETVESLLMLDYDCYEIIVIDDGSTDHTAKLLKEQFHLEAVTCSINQRIPTRPLKAVSQKQLKHVKLTLLEKANGGKGDSLNFGINAAQYDYFLCMDADSMLQEDSLKRIAKTVAKDPSVIAVGGMVKVSQGVALAAGRIVDYHLPRQLISCAQAIEYDCAFFGARVLLDQAAGNLIISGAFGLFKKELAIAVDGYDTGTLGEDMELVMKLHFFCQNNKIPYRIGYETDAICWSQAPSRLKDLCQQRRRWFLGLYQCLKKYLQFFVSGRFKVTVLISYVLYLLFELLSPFIEAFGVTIIVLSLLCHQLNTTFFVSLMLLYICYCVLIALTSFLNRVYSQNNSSITFFDMVWVIYAAIYQCLVLHTVLTLVKVSSFIGYQRKKNAWGQITRDKHKVA
>NZ_LS483354.1|WP_012515459.1|900914_903056_+|hypothetical-protein
MKKYLIFVGLLLSVIGLSYYCCDIDGRLYLPVSNQSAIRTSFYAKDKRIYDQKGSPYLIKGVDVESSIAGYRQRDLSVDEKTYYRWFKQIAAMGANTIRVRVIMPAAFYHALSRYNDTASHSLYLLQGFRIDAYHDNSSISALDKAYLGTLLREARASVDVIHGRKRIWHSDLGLQHYDQDMSKWLIGYIVGDDWHSGTIAYTNHQNHAKPVGFKGRYYATTPQANRFEAILAEIMEEITSYESRKYGWQHLVSFSNTPQSDPFVYQDPFASQAAKYVQLTIENIKPSAKVKAGLFASYKLLDCHSAYRDYLLFDRLGLDDRLVGDIKRMPLYQGYVKLLTSYHRVPVVVTGYGYSTARGVDQMISTSSPLTEKDQGERLMADYTAFIASGCCGATIHSWQDDWTARSWNTSFATNRHQGFLWGDVQSKAQGYGLLTFEHAPRTHAIDGQKAAGEWSRALTYRKNGQQLLVDQDEKYLYIAIESTKKQPLQRQWLIPLDITPKTGSRVIEGFSARFDRFADFALVVDDHKGSRLLVQERYHATDANYLRQINGKDFYVFPPNKHTPRFTMVDMVMRNDGIFAAIDQVPIAKRGLKRYLTGQLKKGNGNRGSAHFDSQTDISFGEHLIELRIPWQLLNFSDPASNKIHDDYFEHYGVEELAIEAIAIGFAPLKESKVITMVEYPLLSWERPRVREVLKTSYQQVQAVWQEKRRK
>NZ_LS483354.1|WP_021320668.1|918396_918735_+|metal-sulfur-cluster-assembly-factor
MTETPKYTEEQVAAIKDRILEALETVIDPELGIDIVNLGLVYEIRFDDNGHTEIDMTLTTMGCPLADLLTDHIHDAMRDVPEVTKVEVKLVWYPVWSVEKMSRYARIALGIR
>NZ_LS483354.1|WP_012515469.1|918875_919724_+|dTDP-4-dehydrorhamnose-reductase
MILITGSNGQLGTELRYLLDERSVDYVAVDVAEMDITNATKVEEVFAQLKPSLVYHCAAYTAVDAAEEEGKALNEAINVAGTEHIAKACERYGATLVYISTDYVFDGNKPAGQEWLETDVPDPQTAYGRAKRLGELAVERYAKQYYIIRTAWVFGHYGKNFVFTMQNLAKTHSRLTVVNDQHGRPTWTRTLAEFMCHLADNRKPYGYYHLSNDAKEDTTWYDFAREILKETAVEVVPVDSSAFPAKAKRPFNSTMNLDKAKATGFVIPTWQEALEAFDKQQQ
>NZ_LS483354.1|WP_012515470.1|919848_921003_+|DUF1972-domain-containing-protein
MQDVFIIGSRGLPAKYGGFETFVEELVTNQTNKSITYHIACLSDSKHKEHFVYKGADCFYINPPKLGPARVIAYDMMAISHALAYIDRYHIQKPIFYVLGNTIGGFIAPFAKQIHQRGGRLLINPDGLEWKRSKWSKPVQQYLKYAEKQMTKHADLVISDNIGIEAYIKKSYPWAKTTFIAYGTEIGRSCLSTSDEKVRTYFQTFEITENQYYLILGRFVPENNYETAIKEFMASSTQRDLVIICNHDKNPYFEQLVSATGCDKDARVKFIGTQYDKQLLAYIREHAFAYIHGHEVGGTNPGLLEALAHTQLNLVLRVAFNQSVAKTAALYWTKEKGSLTGLINRVDQKESFADLGEKAKQIIAKEYTWEKIVGEYEALFLDED
>NZ_LS483354.1|WP_012515471.1|920992_921928_+|glycosyltransferase-family-2-protein
MKINILMSTYNGERFLAEQMQSIQRQTVQDWTLLVRDDGSTDKTLAIIQAFAKKDPRICLINADVQENLGVIRSFHTLLTYEKADIYFFSDQDDVWLDNKLELTLAEAQKHKISDPLLVYTDLKVVNQDLEVRHESMIQTQSHHANTQLVQELTENTVTGGTMMINHALAEQWLSCEHVVMHDWYLALIAAAQGELVYLDVATELYRQHDANVLGARTWSKRLKQWRKPHKLIEKYWWLIVSSQHQARQLLDLQLKPTDRRLIEAYVGLLDKPFYQRLSDLKAYGFRKNRAFHTLVFMALMMTKFGYRRKE
>NZ_LS483354.1|WP_012678074.1|921927_922731_+|ABC-transporter-permease
MELLSKKNRILLKELVKTDFKLRYQGSAIGYLWSILKPLMMFTIMYLVFIRFLRTGGDVPHFPVALLLANVIWSFFSEATSMGMVSIVSRGDLLRKLNFSKHTIVFSAVLGALINFSINLLVVLVFAAINGVTLSPHAYLALPLFVELAVLTVGVALMLSTVFVYYRDLAQVWEVLLQAGMYVTPIIYPITFVFDRHPLAAKILMLNPLAQIIQDLRYLLIDRANVTIWQMSTNWCYIIIPYLIPFVLLALGVAVFNKNAKKFAEII
>NZ_LS483354.1|WP_012515473.1|922730_923939_+|ABC-transporter-ATP-binding-protein
MANKEIAVTVDHVSKSFKLPTEATKSFRTALVNRFKGIKGYTEQHVLRDISFDVYKGDFFGIVGRNGSGKSTLLKIISQIYVPEKGQVTVEGKMVSFIELGVGFNPELTGRENVYMNGAMLGFTTEEVDDMYDDIVDFAELHDFMNQKLKNYSSGMQVRLAFSVAIKAQGDVLILDEVLAVGDEAFQRKCNDYFMERKESGKTTILVTHDMGAVKKYCNRAVLIENGLVKAYGEPFDVANQYSVDNTELKNDEQGAVAEPVSGLASQLEVRLTSKPSLSPDEPISFEISYHVLKDEPTYVAFSLTDIDRNIWVYNDNSQDQPTSGPGHKNISYQCQLSQLNDIKLKLEVTVRDQNGQMLLFSAANHSPLIVLQRHDIAPDDLSALDSASGLYQRNGSWLINQ
>NZ_LS483354.1|WP_012515474.1|923959_924967_+|glycosyltransferase
MKKVSIICTNYNKGPWIAEALDSFLAQQTTFDVEIIVIDDASTDHSRQILMDYQASFPDRIRLIVNEVNLGIARTWVKACLEAKGQYIARCDGDDYWTDTLKLQKQVDLLDSSPDSKWSNTDFDFVDTDGKLIQGNAFESGFTPLTDTYEKMLALKGMTMSSTWLVEADLMRAVNQRIDLETSDDTFDIQLELFQSTSLAYLKDSTTVYRLTGNSDSRPAAEEKMLGRIQGLLETQLSYLSKYPTANMEAITKALLKQDAKNEIRIHQLSHTIHELRQTLADQEALQAEKIDQLQQQLDHQRQEVEALTHQYNCVVTSRRWRYLSKLLELFRRKK
>NZ_LS483354.1|WP_012515475.1|924963_926709_+|alpha-L-Rha-alpha-1,3-L-rhamnosyltransferase
MKRILLYVHFNKYHKVSDHVYYQLEQMRALFSKIVFISNSDIHQEDLEQLEQRHLMDQFIQRHNKGYDFAAWHDGMKALGCEHLVDFDSITIMNDTCFGPLWDMEPYYLKYEADEAVDFWGMTNNRATKVFKEHIQSYFISFKKSLVHSKEFRQFWENIVELTDVQDVIHNYETRITTVFVEAGFRYKTVFDTTKEDSSSMLHADFSYYNPTAILKHHVPFIKVKAIDANQHIAPYLLDFIDQKTSYPASLIVDHMSQVHLPDAKYLLAHKYLSNQPISIAPSKKIAVHLHVFYADLLSEFLEAFSHFHFDYDLLITTDSKAKKAEIKEILRESGASADILVTGNIGRDVLPMLTLKERLSQYDYIGHFHTKKSKEADFWAGQSWRTELIDMMVKPADQILTALAADAIGIVIADIPSFFRFNKIVDAWNEHLIAPEMNQLWQAMGLTKRIDFQTMDTFVMSYGTFVWFKYDALKPLFDLGLNEADIPAEPLPQNSILHAIERLLIYIAWDRHYDFRISRNEKLLTPFIDNKLLNLREGSVPHTYVDFDYMGGIKGALKYIVIGPAKAIRYIIKRLLKRRV
>NZ_LS483354.1|WP_012515476.1|926738_927428_+|glycosyltransferase-family-2-protein
MKKDLLVMIPAYNEEESIEKVVENIKRHFPQYDYVIINDGSSDRTSEICHHNHYNIIDLPENLGLSGAIQTGFKYAFKKGYAKALQFDADGQHLPEYIEALSDSIKAGADCVIGSRFVSAEKNRSLRMMGNSLISFFIKLTTGKRITDPTSGMRMFNQELIRIFATNINYTPEPDTISYLIRQGYRVSEVQVQMNDRLAGQSYLTLSRSIKYMVHMFISIILIQNFRKR
>NZ_LS483354.1|WP_012515477.1|927432_927789_+|DUF2304-domain-containing-protein
MFIGLQLILIIVALLTAMFILDSIRRSKILIEDSFFWLFFSLIVLLLSLFPNAAVYFSRQLGFESPANFVFLSIIFLLIINQFFITQKLSRTEIKLKKMIQYLALNEKEKQEEDENQQ

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Crispr_ID: NZ_LS483354_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LS483354_5

1406197-1407354

TypeII

II-A,II-B

Consensus_repeat	Method
GTTTTGGAACCATTCAATACAGCATAACTCTAAAAC	CRISPRCasFinder
GTTTTGGAACCATTCAATACAGCATAACTCTAAAAC	CRT
GTTTTGGAACCATTCAATACAGCATAACTCTAAAAC	PILER-CR

17 spacers

csn2,cas2,cas1,cas9

The CRISPR arrays of NZ_LS483354_5

>merge|NZ_LS483354|5|1406197-1407354|CRISPRCasFinder,CRT,PILER-CR
ATATTAAAACCATTCAAAACAGCATAACTCTAAAACTGTTCAAACCATTCATTACACGTCTCATCTGTTTTGGAACCATTCAAAACAGCATAACTCTAAAACTATCAACAGGTGTTTCTTCAATAACCTTTAGTTTTGGAACCATTCAAAACAGCATAACTCTAAAACATATTGATAATTTACAAACTATTTTTGATAGTTTTGGAACCATTCAATACAGCATAACTCTAAAACCCGTAAACACGTCATAGGCTTGGTACTGACGTTTTGGAACCATTCAATACAGCATAACTCTAAAACTTGAGGGATTGTATGAGCAAATCCAATGATGTTTTGGAACCATTCAATACAGCATAACTCTAAAACTATAAATTGCAGCAGTTAGCATTTTTAAATGTTTTGGAACCATTCAATACAGCATAACTCTAAAACTTACCATCATCTTTCCACTGTCTGATAGCTGTTTTGGAACCATTCAATACAGCATAACTCTAAAACTTGAGGGATTGTATGAGCAAATCCAATGATGTTTTGGAACCATTCAATACAGCATAACTCTAAAACTGGGCTGCCAGCTTAATCTCAGCTTGCAGGGTTTTGGAACCATTCAATACAGCATAACTCTAAAACTCGCCTGTGTGCCAAAACCAGCGCCGACTAGTTTTGGAACCATTCAATACAGCATAACTCTAAAACCTGGTGGCAGGTAAAGTGTGTTGTTTTTTGGTTTTGGAACCATTCAATACAGCATAACTCTAAAACATTGCGTAAAGGGTAGCTGTAGCCTCTACAGTTTTGGAACCATTCAATACAGCATAACTCTAAAACTAATGTAGAGTTAGCTTATTTCGACAATGAGTTTTGGAACCATTCAATACAGCATAACTCTAAAACGAGATAAGTAGCAGTATACAAGATGATTTAGTTTTGGAACCATTCAATACAGCATAACTCTAAAACTAACAAACAAGGAACGTTTAACACAAATAAGTTTTGGAACCATTCAATACAGCATAACTCTAAAACTCTTAATGCGTATGAAAAGCAGATTATTGAGTTTTGGAACCATTCAATACAGCATAACTCTAAAACAACTCTTTAATGGATTCAGCGACAGGTTTAGTTTTGGAACCATTCAATACAGCATAACTCTAAAAC

>NZ_LS483354|5|5|1406197-1407354|CRISPRCasFinder
ATATTAAAACCATTCAAAACAGCATAACTCTAAAAC	TGTTCAAACCATTCATTACACGTCTCATCT
GTTTTGGAACCATTCAAAACAGCATAACTCTAAAAC	TATCAACAGGTGTTTCTTCAATAACCTTTA
GTTTTGGAACCATTCAAAACAGCATAACTCTAAAAC	ATATTGATAATTTACAAACTATTTTTGATA
GTTTTGGAACCATTCAATACAGCATAACTCTAAAAC	CCGTAAACACGTCATAGGCTTGGTACTGAC
GTTTTGGAACCATTCAATACAGCATAACTCTAAAAC	TTGAGGGATTGTATGAGCAAATCCAATGAT
GTTTTGGAACCATTCAATACAGCATAACTCTAAAAC	TATAAATTGCAGCAGTTAGCATTTTTAAAT
GTTTTGGAACCATTCAATACAGCATAACTCTAAAAC	TTACCATCATCTTTCCACTGTCTGATAGCT
GTTTTGGAACCATTCAATACAGCATAACTCTAAAAC	TTGAGGGATTGTATGAGCAAATCCAATGAT
GTTTTGGAACCATTCAATACAGCATAACTCTAAAAC	TGGGCTGCCAGCTTAATCTCAGCTTGCAGG
GTTTTGGAACCATTCAATACAGCATAACTCTAAAAC	TCGCCTGTGTGCCAAAACCAGCGCCGACTA
GTTTTGGAACCATTCAATACAGCATAACTCTAAAAC	CTGGTGGCAGGTAAAGTGTGTTGTTTTTTG
GTTTTGGAACCATTCAATACAGCATAACTCTAAAAC	ATTGCGTAAAGGGTAGCTGTAGCCTCTACA
GTTTTGGAACCATTCAATACAGCATAACTCTAAAAC	TAATGTAGAGTTAGCTTATTTCGACAATGA
GTTTTGGAACCATTCAATACAGCATAACTCTAAAAC	GAGATAAGTAGCAGTATACAAGATGATTTA
GTTTTGGAACCATTCAATACAGCATAACTCTAAAAC	TAACAAACAAGGAACGTTTAACACAAATAA
GTTTTGGAACCATTCAATACAGCATAACTCTAAAAC	TCTTAATGCGTATGAAAAGCAGATTATTGA
GTTTTGGAACCATTCAATACAGCATAACTCTAAAAC	AACTCTTTAATGGATTCAGCGACAGGTTTA
GTTTTGGAACCATTCAATACAGCATAACTCTAAAAC

>NZ_LS483354|5|2|1406197-1407354|CRT
ATATTAAAACCATTCAAAACAGCATAACTCTAAAAC	TGTTCAAACCATTCATTACACGTCTCATCT
GTTTTGGAACCATTCAAAACAGCATAACTCTAAAAC	TATCAACAGGTGTTTCTTCAATAACCTTTA
GTTTTGGAACCATTCAAAACAGCATAACTCTAAAAC	ATATTGATAATTTACAAACTATTTTTGATA
GTTTTGGAACCATTCAATACAGCATAACTCTAAAAC	CCGTAAACACGTCATAGGCTTGGTACTGAC
GTTTTGGAACCATTCAATACAGCATAACTCTAAAAC	TTGAGGGATTGTATGAGCAAATCCAATGAT
GTTTTGGAACCATTCAATACAGCATAACTCTAAAAC	TATAAATTGCAGCAGTTAGCATTTTTAAAT
GTTTTGGAACCATTCAATACAGCATAACTCTAAAAC	TTACCATCATCTTTCCACTGTCTGATAGCT
GTTTTGGAACCATTCAATACAGCATAACTCTAAAAC	TTGAGGGATTGTATGAGCAAATCCAATGAT
GTTTTGGAACCATTCAATACAGCATAACTCTAAAAC	TGGGCTGCCAGCTTAATCTCAGCTTGCAGG
GTTTTGGAACCATTCAATACAGCATAACTCTAAAAC	TCGCCTGTGTGCCAAAACCAGCGCCGACTA
GTTTTGGAACCATTCAATACAGCATAACTCTAAAAC	CTGGTGGCAGGTAAAGTGTGTTGTTTTTTG
GTTTTGGAACCATTCAATACAGCATAACTCTAAAAC	ATTGCGTAAAGGGTAGCTGTAGCCTCTACA
GTTTTGGAACCATTCAATACAGCATAACTCTAAAAC	TAATGTAGAGTTAGCTTATTTCGACAATGA
GTTTTGGAACCATTCAATACAGCATAACTCTAAAAC	GAGATAAGTAGCAGTATACAAGATGATTTA
GTTTTGGAACCATTCAATACAGCATAACTCTAAAAC	TAACAAACAAGGAACGTTTAACACAAATAA
GTTTTGGAACCATTCAATACAGCATAACTCTAAAAC	TCTTAATGCGTATGAAAAGCAGATTATTGA
GTTTTGGAACCATTCAATACAGCATAACTCTAAAAC	AACTCTTTAATGGATTCAGCGACAGGTTTA
GTTTTGGAACCATTCAATACAGCATAACTCTAAAAC

>NZ_LS483354|5|2|1406263-1407354|PILER-CR
GTTTTGGAACCATTCAAAACAGCATAACTCTAAAAC	TATCAACAGGTGTTTCTTCAATAACCTTTA
GTTTTGGAACCATTCAAAACAGCATAACTCTAAAAC	ATATTGATAATTTACAAACTATTTTTGATA
GTTTTGGAACCATTCAATACAGCATAACTCTAAAAC	CCGTAAACACGTCATAGGCTTGGTACTGAC
GTTTTGGAACCATTCAATACAGCATAACTCTAAAAC	TTGAGGGATTGTATGAGCAAATCCAATGAT
GTTTTGGAACCATTCAATACAGCATAACTCTAAAAC	TATAAATTGCAGCAGTTAGCATTTTTAAAT
GTTTTGGAACCATTCAATACAGCATAACTCTAAAAC	TTACCATCATCTTTCCACTGTCTGATAGCT
GTTTTGGAACCATTCAATACAGCATAACTCTAAAAC	TTGAGGGATTGTATGAGCAAATCCAATGAT
GTTTTGGAACCATTCAATACAGCATAACTCTAAAAC	TGGGCTGCCAGCTTAATCTCAGCTTGCAGG
GTTTTGGAACCATTCAATACAGCATAACTCTAAAAC	TCGCCTGTGTGCCAAAACCAGCGCCGACTA
GTTTTGGAACCATTCAATACAGCATAACTCTAAAAC	CTGGTGGCAGGTAAAGTGTGTTGTTTTTTG
GTTTTGGAACCATTCAATACAGCATAACTCTAAAAC	ATTGCGTAAAGGGTAGCTGTAGCCTCTACA
GTTTTGGAACCATTCAATACAGCATAACTCTAAAAC	TAATGTAGAGTTAGCTTATTTCGACAATGA
GTTTTGGAACCATTCAATACAGCATAACTCTAAAAC	GAGATAAGTAGCAGTATACAAGATGATTTA
GTTTTGGAACCATTCAATACAGCATAACTCTAAAAC	TAACAAACAAGGAACGTTTAACACAAATAA
GTTTTGGAACCATTCAATACAGCATAACTCTAAAAC	TCTTAATGCGTATGAAAAGCAGATTATTGA
GTTTTGGAACCATTCAATACAGCATAACTCTAAAAC	AACTCTTTAATGGATTCAGCGACAGGTTTA
GTTTTGGAACCATTCAATACAGCATAACTCTAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LS483354.1\|WP_012515931.1\|1409506_1413553_-\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226044
NZ_LS483354.1\|WP_012515924.1\|1400289_1403436_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|367432
NZ_LS483354.1\|WP_024273206.1\|1414066_1414390_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|373960
NZ_LS483354.1\|WP_111721713.1\|1418158_1419367_-\|TNT-domain-containing-protein	unknown	unknown	gnl\|CDD\|379424
NZ_LS483354.1\|WP_012515936.1\|1417133_1417556_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LS483354.1\|WP_012515937.1\|1417745_1418150_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|317917
NZ_LS483354.1\|WP_012515926.1\|1404797_1405268_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274361
NZ_LS483354.1\|WP_041785907.1\|1414390_1414783_-\|glycohydrolase-toxin-TNT-related-protein	unknown	unknown	gnl\|CDD\|379424
NZ_LS483354.1\|WP_012515925.1\|1403725_1404814_-\|anti-sigma-factor-C-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|379376
NZ_LS483354.1\|WP_012515923.1\|1398144_1399341_-\|elongation-factor-Tu	unknown	unknown	gnl\|CDD\|234596
NZ_LS483354.1\|WP_012515930.1\|1408637_1409507_-\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|274694
NZ_LS483354.1\|WP_041785605.1\|1415082_1415829_-\|DUF1911-domain-containing-protein	unknown	unknown	gnl\|CDD\|370193
NZ_LS483354.1\|WP_012515917.1\|1392037_1393339_+\|HD-domain-containing-protein	unknown	unknown	gnl\|CDD\|224004
NZ_LS483354.1\|WP_021320962.1\|1408296_1408641_-\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
NZ_LS483354.1\|WP_012515927.1\|1405624_1405834_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_LS483354.1\|WP_111721712.1\|1394358_1395573_+\|lipid-II:glycine-glycyltransferase-FemX	unknown	unknown	gnl\|CDD\|225224
NZ_LS483354.1\|WP_012515922.1\|1397120_1397879_-\|triose-phosphate-isomerase	unknown	unknown	gnl\|CDD\|234589
NZ_LS483354.1\|WP_012515919.1\|1393549_1394359_+\|sugar-phosphatase	unknown	unknown	gnl\|CDD\|182509
NZ_LS483354.1\|WP_037581793.1\|1407629_1408307_-\|type-II-A-CRISPR-associated-protein-Csn2	csn2	cd09758_csn2_CAS-II-A	gnl\|CDD\|213408
NZ_LS483354.1\|WP_012515921.1\|1395572_1396808_+\|aminoacyltransferase	unknown	unknown	gnl\|CDD\|367067

Protein	Function_ID	Function_description	E-value
NZ_LS483354.1\|WP_012515931.1\|1409506_1413553_-\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|226044	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms].	0
NZ_LS483354.1\|WP_012515924.1\|1400289_1403436_+\|hypothetical-protein	gnl\|CDD\|367432	pfam03272, Mucin_bdg, Putative mucin or carbohydrate-binding module. This family is the putative binding domain for the substrates of enhancin, and other similar metallopeptidases. This is not the enzymically active, peptidase, part of the proteins - see pfam13402.	6.39694e-15
NZ_LS483354.1\|WP_024273206.1\|1414066_1414390_-\|hypothetical-protein	gnl\|CDD\|373960	pfam15597, Imm59, Immunity protein 59. A predicted immunity protein with an alpha+beta fold and a conserved [DE]R motif. Proteins containing this domain are present in bacterial polymorphic toxin systems as an immediate gene neighbor of the toxin gene, which usually contains toxin domains of the Ntox13 or Ntox40 families. In some proteins this domain is fused to the Imm38, pfam15599 immunity domain.	3.07367e-45
NZ_LS483354.1\|WP_111721713.1\|1418158_1419367_-\|TNT-domain-containing-protein	gnl\|CDD\|379424	pfam14021, TNT, Tuberculosis necrotizing toxin. This is the C-terminal domain secreted by Mycobacterium tuberculosis (Mtb). It induces necrosis of infected cells to evade immune responses. Mtb utilizes the protein CpnT to kill human macrophages by secreting its C-terminal domain (CTD), named tuberculosis necrotizing toxin (TNT) that induces necrosis. It acts as a NAD+ glycohydrolase which hydrolyzes the essential cellular coenzyme NAD+ in the cytosol of infected macrophages resulting in necrotic cell death. CpnT transports its toxic CTD from the cell surface of M. tuberculosis by proteolytic cleavage, where the toxin is cleaved to induce host cell death. Structural analysis determined that the TNT core contains only six beta-strands as opposed to seven found in all known NAD+-utilizing toxins, and is significantly smaller, with only two short alpha-helices and two 3/10 helices. Furthermore, the putative NAD+ binding pocket identified Q822, Y765 and R757 as residues possibly involved in NAD+-binding and hydrolysis based on similar positions of catalytic amino acids of ADP-ribosylating toxins. While glutamine 822 residue was detected to be highly conserved among TNT homologs.	5.57573e-28
NZ_LS483354.1\|WP_012515937.1\|1417745_1418150_-\|hypothetical-protein	gnl\|CDD\|317917	pfam15599, Imm63, Immunity protein 63. A predicted immunity protein with an alpha+beta fold and a conserved E+G and ExxY motifs. Proteins containing this domain are present in bacterial polymorphic toxin systems as an immediate gene neighbor of the toxin gene, which usually contains toxin domains of the Ntox40, Tox-CdiAC and Tox-ARC families. The protein is also found in poly-immunity loci in polymorphic toxin systems.	0.00883627
NZ_LS483354.1\|WP_012515926.1\|1404797_1405268_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|274361	TIGR02950, RNA_polymerase_ECF-type_sigma_factor, RNA polymerase sigma factor, SigM family. This family of RNA polymerase sigma factors is a member of the Sigma-70 subfamily (TIGR02937) and is restricted to certain lineages of the order Bacillales. This family encompasses at least two distinct sigma factors as two proteins are found in each of B. anthracis, B. subtilis subsp. subtilis str. 168, and B. lichiniformis (although these are not apparently the same two in each). One of these is designated as SigM in B. subtilis (Swiss_Prot: SIGM_BACSU) and is activated by various stressors.	1.1417e-21
NZ_LS483354.1\|WP_041785907.1\|1414390_1414783_-\|glycohydrolase-toxin-TNT-related-protein	gnl\|CDD\|379424	pfam14021, TNT, Tuberculosis necrotizing toxin. This is the C-terminal domain secreted by Mycobacterium tuberculosis (Mtb). It induces necrosis of infected cells to evade immune responses. Mtb utilizes the protein CpnT to kill human macrophages by secreting its C-terminal domain (CTD), named tuberculosis necrotizing toxin (TNT) that induces necrosis. It acts as a NAD+ glycohydrolase which hydrolyzes the essential cellular coenzyme NAD+ in the cytosol of infected macrophages resulting in necrotic cell death. CpnT transports its toxic CTD from the cell surface of M. tuberculosis by proteolytic cleavage, where the toxin is cleaved to induce host cell death. Structural analysis determined that the TNT core contains only six beta-strands as opposed to seven found in all known NAD+-utilizing toxins, and is significantly smaller, with only two short alpha-helices and two 3/10 helices. Furthermore, the putative NAD+ binding pocket identified Q822, Y765 and R757 as residues possibly involved in NAD+-binding and hydrolysis based on similar positions of catalytic amino acids of ADP-ribosylating toxins. While glutamine 822 residue was detected to be highly conserved among TNT homologs.	1.14725e-07
NZ_LS483354.1\|WP_012515925.1\|1403725_1404814_-\|anti-sigma-factor-C-terminal-domain-containing-protein	gnl\|CDD\|379376	pfam13800, Sigma_reg_N, Sigma factor regulator N-terminal. This domain is found near the N-terminus of a sigma factor regulator. The N-terminus is responsible for interaction with the sigma factor.	4.09731e-10
NZ_LS483354.1\|WP_012515923.1\|1398144_1399341_-\|elongation-factor-Tu	gnl\|CDD\|234596	PRK00049, PRK00049, elongation factor Tu; Reviewed.	0
NZ_LS483354.1\|WP_012515930.1\|1408637_1409507_-\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	6.18158e-127
NZ_LS483354.1\|WP_041785605.1\|1415082_1415829_-\|DUF1911-domain-containing-protein	gnl\|CDD\|370193	pfam08929, DUF1911, Domain of unknown function (DUF1911). This domain is found in a set of hypothetical bacterial proteins.	7.85645e-31
NZ_LS483354.1\|WP_012515917.1\|1392037_1393339_+\|HD-domain-containing-protein	gnl\|CDD\|224004	COG1078, COG1078, HD superfamily phosphohydrolases [General function prediction only].	2.41415e-156
NZ_LS483354.1\|WP_021320962.1\|1408296_1408641_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	1.7275e-50
NZ_LS483354.1\|WP_012515927.1\|1405624_1405834_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	1.00173e-07
NZ_LS483354.1\|WP_111721712.1\|1394358_1395573_+\|lipid-II:glycine-glycyltransferase-FemX	gnl\|CDD\|225224	COG2348, COG2348, Peptidoglycan interpeptide bridge formation enzyme [Cell wall/membrane/envelope biogenesis].	3.70352e-134
NZ_LS483354.1\|WP_012515922.1\|1397120_1397879_-\|triose-phosphate-isomerase	gnl\|CDD\|234589	PRK00042, tpiA, triosephosphate isomerase; Provisional.	4.40647e-147
NZ_LS483354.1\|WP_012515919.1\|1393549_1394359_+\|sugar-phosphatase	gnl\|CDD\|182509	PRK10513, PRK10513, sugar phosphate phosphatase; Provisional.	8.0389e-108
NZ_LS483354.1\|WP_037581793.1\|1407629_1408307_-\|type-II-A-CRISPR-associated-protein-Csn2	gnl\|CDD\|213408	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	6.4601e-112
NZ_LS483354.1\|WP_012515921.1\|1395572_1396808_+\|aminoacyltransferase	gnl\|CDD\|367067	pfam02388, FemAB, FemAB family. The femAB operon codes for two nearly identical approximately 50-kDa proteins involved in the formation of the Staphylococcal pentaglycine interpeptide bridge in peptidoglycan. These proteins are also considered as a factor influencing the level of methicillin resistance.	2.26863e-164

>NZ_LS483354.1|WP_012515927.1|1405624_1405834_+|helix-turn-helix-transcriptional-regulator
MSSLSRKHEQIHHQRKLAKPSQSQLAELLETNKQTLSMTENGQRKAPIKKLIKLHNIFGVTANELLLKY
>NZ_LS483354.1|WP_012515926.1|1404797_1405268_-|sigma-70-family-RNA-polymerase-sigma-factor
MAYSKEIIAYLVRSGVAKELARDISQDVLLKMLESDLALPPEKIRAWMYRVAVRKYIDQYRRDKAYLDILQRDFFHQERVIEFDQPNYEPLYTAVNELPEKYRWVLSLYYFQDLSVKEMASLLHWSVSSVKVNLMRGRRCLKEKLKKAGYTYDDFN
>NZ_LS483354.1|WP_012515925.1|1403725_1404814_-|anti-sigma-factor-C-terminal-domain-containing-protein
MTISTDFEAIAKRHKRRLTLKYVVLSAGLALVALVLGYMGLNRLTSMNGQYLMAYYNNRIQIAYPNIDVNSFFYNANSQFTGELHSERTKDIAGISVPFEPYRAPYSLVLRRTDSSNEYLVSGDDGRSTYTRGTHYKMPRFFNTKAKVTESNHDKPTQDLDFIADMSGQAVEVAITFDKPYLLSDIVKLVPDQLKLNWIWIGTESSYDTSGLFPANLYGFKPDWKANMTYKEQKQLDEKINNILKKDNEADLSKLNAAYDKPVTPTVALQNSYDTFRHYLQEAVDNHWINSTYGDANGTHLSEQEDVALFLKNNRNVKTAKFAGIILTGKAEQFASLKTADWIYASNIGQSVTIQPYHQLTK
>NZ_LS483354.1|WP_012515924.1|1400289_1403436_+|hypothetical-protein
MKLKKIIALACVGILTLHQLSPAIVYATTDASDGTAATVNTGDTAAPSAEAKPSQLMTDTQALFTDHSFSKLASNVTQEKIDALKQKATASTEPEKEQILGLLDKAASLLQQFTLQGLGNGVFAQLYFYADGSYTASLVTKKGQPHSYFSTNYATVTILNDKKETVYSKEYVGNVSQVAQTEELELKEGYYLIINKQEPNRFYTNHNDALKQNNTNPYTYVVRDGQLERIDDSNRTLRFLGLGNAEYATLRVDYNASTLTLKTKQTKPHVYFSGSYEKLEVLDTENQVIYTKDFIGTQVLEAKTETIPFKVGYKIRLTGSEHHTRVKFYDDYAVEAPLTLSKNQATLKLLDHSLELMRSKTGSELESEVLTLFTDESTSKLASGVTQEKIDALRKKATDSTEPEKEQILSLLDKAASLLQQFTLQGLGNGIFAQLYFYADGSYTASLVTKKGQPHSYIANNYATLTILNEKKETVYAKEYVGNVSQTAKTESLTLKEGYYLVITKQEPNRFYTNHNDALKQNNTNPYTYVVRNGQLERIDEKNRTLHFLGLGNAEYATLKVDYNASTLTLKTKKAKPHVYFSGTYEKLEVLDLKDKVVYTQDFIGNQVLTAKTETIPFKVGYKIRLTGSEHHTRVKAYDEENKAVSLSLPKNKAEIRITKGGLASVFALEAKATNTLVQAVEKRLTKEKIEDFKKKDNKHKAFIDWLLKDNEAMQLYLGAGYAHSAAQGGMSSYQFKNTYNLTNELEALELWFKIWDKYKASHQGIQLKMAIAVALEFTKPVGAWYNESQKIDPLERFATFAEAEQGNVLFEDFYSLTVEQIRNVVNAKITDEDMKWLRQYVETNKPAMINRNDITKGYSLISYVGTNPETGVSVHSSGFYGPNPTIKEVIKYGGVCGAMSKLSSVLAQAYGVPAFPIGQPGHCAYIYLNADHTYQLGYDVSGWTGCGNYNTTLPYVQIHNVYSLNIDAYNASEYERYKAEAATDEDTKLNHLDAALKAEPLNYKAWNDKLALIASDQTAYQSTLNDMKSALKDYPVIINNLEKDTKQ
>NZ_LS483354.1|WP_012515923.1|1398144_1399341_-|elongation-factor-Tu
MAKEKYDRSKPHVNIGTIGHVDHGKTTLTAAITTVLARRLPSSVNQPKDYASIDAAPEERERGITINTAHVEYETATRHYAHIDAPGHADYVKNMITGAAQMDGAILVVASTDGPMPQTREHILLSRQVGVKHLIVFMNKVDLVDDEELLELVEMEIRDLLSEYDFPGDDLPVIQGSALKALEGDSKYEDIIMELMDTVDSYIPEPERDTDKPLLLPVEDVFSITGRGTVASGRIDRGTVRVNDEIEIVGIRDEIKKAVVTGVEMFRKQLDEGLAGDNVGVLLRGVQRDEIERGQVIAKPGSINPHTKFKGEVYILTKEEGGRHTPFFNNYRPQFYFRTTDVTGSIELPAGTEMVMPGDNVTIDVELIHPIAVEQGTTFSIREGGRTVGSGIVSEIEA
>NZ_LS483354.1|WP_012515922.1|1397120_1397879_-|triose-phosphate-isomerase
MSRKPIIAGNWKMNKNPQEAKAFVEAVVSKLPSNDLVDVAVAAPAVDLVTTIEAAKDSVLKVAAQNCYFENSGAYTGETSPKVLADMGADYVVIGHSERRDYFHETDEDINKKAKAIFANGLTPIICCGESLETYEAGQAVAFVGAQVSAALEGLSAEQVASLVLAYEPIWAIGTGKSATQEDAQSMCKAVRDVVAADFGQEVADKVRVQYGGSVKPENIKEYMACPDVDGALVGGASLEADSFLALLDFVN
>NZ_LS483354.1|WP_012515921.1|1395572_1396808_+|aminoacyltransferase
MALDIIDKETFGSFCSQVEYKSFIQSIEMAELLQKRGYQTQYLAISDQKDIKVAAILYSVAMAGGLRMEINSGPVVADTTYTTAFYKALQDYAKQQGALELVIKPYDTYQTFTGDGHPNDDEKPELIKALTKLNFTHDGLLTGYPNGEGDWHYVKELSGLTSANLIKSFSKKGKALLKKAKTFGIKLHKLSRDELTQFKAITAATSSRRDYTDKSLSYYQDFYDSFGDSCEFMVATLNFDDYLANLRHSQDRLKQGMAKLEADLAKNPRSEKKQNRLRELSSQFDTFQVRVAEAQELIIKYGKKDVPLAGSLFVYTPQEAVYLFSGSYPEFNRFYAPALLQEHVMLRAIEKGISCYNFLGIMGEFDGSDGVLRFKQNFNGYITRKMGTFRYYPKPFKYKAIKTIKALISRS
>NZ_LS483354.1|WP_111721712.1|1394358_1395573_+|lipid-II:glycine-glycyltransferase-FemX
MYTYKIGISAKEHDQFVLSHPQVNLLQSAHWAQVKDNWEHELIGFYQDDKQVAAAACLIKRLPLGMTMIYIPRGPIMDYSDFELVNFVMTSLKAYGKSKRALLIKCDPSLFISQALIGEERKDNDFTLSTIDFLKTIGVEWAGRTKELEQTIQPRFQANIYAKDFKLQSLSKKARQSIRTAQNKGVEIIIGSTELLEDFSALMKKTEERKHISLRGISYYDKLMTTYANQAYITMARLNLPKQKTLIQQQLEEALSNQQVFTQNSKPGKVAENQNTIKRLERELAFLDKEIQAGKSIVPLAATLTLIYGRTSENLYAGMDNDFRQYQAALLTWYHTAEEAFKRGCQWHNLGGVENQLDGGLFQFKARLNPAIEEFAGEFSIPVGPISKVAMIAYNLRKKLRSNP
>NZ_LS483354.1|WP_012515919.1|1393549_1394359_+|sugar-phosphatase
MSIKLVAIDIDGTLLTDDRRVTNDVFDAIQEAKAQGVHIVIATGRPIAGVISLLEQLQLNQKGDHVITFNGGLIQDTATGEEVVKELMTYDDYLDIEYLSRRLGVHMHAITTEGIYTANRNIGKYTVREARLVDMPVFYRTPEEMADKEIIKMMMIDEPDLLDEAIKQIPQAFYDTYNIVKSTPFYLELTPKTVSKGTAISHLAKKLGIDMSQTMAIGDAENDRAMLEAVANPVVMENGAPELKKLAKYITKSNNDSGVAHAIRKWVLN
>NZ_LS483354.1|WP_012515917.1|1392037_1393339_+|HD-domain-containing-protein
MNEKVFRDPVHNYIHVNHQLIYELINTKEFQRLRRIKQVPTTAFTFHGAEHSRFSHCLGVYEIARRVTEIFEEKYADLWHKEEGLLTMTAALLHDIGHGAYSHTFETLFDTDHEAVTQDIITSPETEINAILTRYSPDFPDKVASVINHTYPNKQVVQLISSQIDCDRMDYLLRDSYFSAANYGQFDLMRILRVIRPVKDGIVFDLSGMHAVEDYIVSRFQMYMQVYFHPASRAVELILQNLLKRAKALYPSQQDYFQKTAPGLIPFFEKSFTLADYLCLDDGVLNTYFQQWINSEDHILSDLSSRFINRKILKSVTFDQESQQDLERLRQLVESVGFDPNYYTGIHVNFDLPYDIYRPELENPRTQIEMIQKDGSRAELSQLSAIVKALTGTSYGDRRFYFPKEMLELDDLFTSDKEAFISYISNGHFHFTS
>NZ_LS483354.1|WP_037581793.1|1407629_1408307_-|type-II-A-CRISPR-associated-protein-Csn2
MMINFSLLDEPLKLEQMTILTVKDVRVFSSLIRNFYQYGESGDLKLFDHRLKGLKETELMIITDILEYDINSPTILKMVHADLEECFNEQPEVKSMLEKLAATITELIAFECLENELDLEYDKITILELIKALGVKVETQSDTIFEKCLEILQVFKYLTKKKLLVFVNSGSYFTREEFEQLKEYVELSNQTVLFLEPRPLYDFPQYILDEDYFLVTQNKLEGIEH
>NZ_LS483354.1|WP_021320962.1|1408296_1408641_-|CRISPR-associated-endonuclease-Cas2
MSYRYMRMILMFDMPVDTVEERKAYRKFRKFLLSEGFIMHQFSVYSKLLLNNTANNAMIRRLREQNPQKGNITLLTVTEKQFARMIYLHGEKNASIANTDKRLVFLGEAYSGDD
>NZ_LS483354.1|WP_012515930.1|1408637_1409507_-|type-II-CRISPR-associated-endonuclease-Cas1
MAGWRTVVVNTHSKLSYKNNHFIFKDAYKTELIHLSEIDILLLETTDIVLSTMLIKRLVDNNSLVIFCDDKRLPTAMLMPYYARHDSSLQLSRQMAWSEELKADVWTQIIAQKMLNQSCYLGQCSYFEKSQAIMNLYHDLKSFDPSNREGHSARIYFNALFGNQFSREQDCDINAGLDYGYTLLLSIFAREVVICGCMTQFGLKHSNQFNQFNFASDLMEPFRPIIDRIVYDNRHKTFVQIKRQLLSIFSETYPYNGKEMYLSNIVSDYTKKVIKALNNEGEGVPEFRI
>NZ_LS483354.1|WP_012515931.1|1409506_1413553_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MKKPYTIALDIGTNSVGWVVVTDDYRVPTKKMKVLGNTERKTIKKNLIGALLFDSGDTAEGTRLKRTARRRYTRRKNRLRYLKEIFTEEMAKVDDGFFQRLEDSFYVLEDKEGNKHPIFANLADEVAYHKKYPTIYHLRKELVDNPQKADLRLIYLAVAHIIKFRGHFLIEGTLSSKNNNLQKSFDHLVDTYNLLFEEQRLLTEGINAKELLSAALSKSKRLENLISLIPGQKKTGIFGNIIALSLGLTPNFKANFGLSKDVKLQLAKDTYADDLDSLLAQIGDQYADLFLAAKNLSDAILLSDILTESDEITRAPLSASMVKRYREHHKDLVTLKTLIKDQLPEKYQEIFLDKTKNGYAGYIEGQVSQEEFYKYLKPILARLDGSEPLLLKIDREDFLRKQRTFDNGSIPHQIHLEELHAILRRQEVFYPFLKDNRKKIESLLTFRIPYYVGPLARGHSRFAWVKRKFDGAIRPWNFEEIVDEEASAQIFIEKMTKNDLYLPNEKVLPKHSLLYETFTVYNELTKVKYATEGMTRPQFLSADQKQAIVDLLFKTNRKVTVKQLKENYFKKIECWDSVEITGVEDSFNASLGTYHDLLKIIQDKDFLDNPDNQKIIEDIILTLTLFEDKKMISKRLDQYAHLFDKVVLNKLERHHYTGWGRLSGKLINGIRDKQSGKTILDFLKADGFANRNFMQLIHDSELSFIDEIAKAQVIGKTEYSKDLVGNLAGSPAIKKGISQTIKIVDELVKIMGYLPQQIVIEMARENQTTAQGIKNARQRMRKLEETAKKLGSNILKEHPVDNSQLQNDKRYLYYLQNGKDMYTGDDLDIDYLSSYDIDHIIPQSFIKNNSIDNKVLTSQGANRGKLDNVPSEAIVRKMKGYWQSLLRAGAISKQKFDNLTKAERGGLTQVDKAGFIQRQLVETRQITKHVAQILDSRFNTEFDDHNKRIRKVHIITLKSKLVSDFRKEFGLYKIRDINHYHHAHDAYLNAVVAKAILGKYPQLAPEFVYGDYPKYNSFKERQKATQKMLFYSNILKFFKDQESLHVNSDGEEIWNANKHLPIIKNVLSIPQVNIVKKTEVQTGGFYKESILSKGNSDKLIPRKNNWDTRKYGGFDSPTVAYSVLVIAKMEKGKAKVLKPVKEMVGITIMERTAFEENPVVFLEARGYREIQEHLIIKLPKYSLFELENGRRRLLASASELQKGNELFLPVDYMTFLYLAAHYHELTGSSEDVLRKKYFVDRHLHYFDDIIQMINDFAERHILASSNLEKINHTYHNNSDLPVNERAENIINVFTFVALGAPAAFKFFDATIDRKRYTSTKEVLNATLIHQSVTGLYETRIDLSQLGEN
>NZ_LS483354.1|WP_024273206.1|1414066_1414390_-|hypothetical-protein
MKTLDRQKQEILREIYRLGYDTLRFSIFSKERPGEWEVVIEYDDTSGVYLVYGTMDRSSYHGKTAYRKFNAAKEGFMTFLEDIVMINKYYVEEGMPVNYDSPLWSNN
>NZ_LS483354.1|WP_041785907.1|1414390_1414783_-|glycohydrolase-toxin-TNT-related-protein
MTPAFLKTGDLLDRYGESGGPFTSPIINHKVISFNKRGLPYPEGYQNYHQYRILQDITIENVKFDYDNLAYKDKFILDKLMKDYKFSLDDIATPQKGMIDLVFGSGGGIQIKLGTSVSWYEKLGLIKEIK
>NZ_LS483354.1|WP_041785605.1|1415082_1415829_-|DUF1911-domain-containing-protein
MKTRDKLNTLENYQKVIMFHQCVIESDLEKIEDLVKDERNGIQKSKIDNQQVIHNTKRWMARDLFKIFKATYSAGYPISEVKKAFLDYLDVKCQVLDGQVAYLNDLDIISIAILLDIDTETIAPFIDNIGQVGYDDFLIDFLIRWYRPEWKQHDDISFKRPYGHAQKIIQAPDKEQALGFLRNYIFSKWYAGSNDAPWYNSHKAKNPAFHVGYWSFESGAMAKILELDDSSLKDQQYYPYDLVHWKNV
>NZ_LS483354.1|WP_012515936.1|1417133_1417556_-|hypothetical-protein
MARSQLEWEDVSQYEEVKGYGQRVWKHQGKYYFVAEEGGIAVQRVVYELPYDLFELLESGERSLGDVHSKLQDGNWPPTEEEKKKVKKEFLTKHPSSLINVPQNRELFTQEELEKLIPIAEELWIKGEGQLPDDYISPLK
>NZ_LS483354.1|WP_012515937.1|1417745_1418150_-|hypothetical-protein
MKELKEELMKLLLKIGVTSLNESVLFEEKRPRVYFPEGQTVFLENNIYYVIGVEHGKVNSERTFGEKEDVLYFLLESYVDTIAGKYAWEKVSGDFEQYGKLLPEEQIRVFSMIAPKYGQRRKQELEAQQESDDV
>NZ_LS483354.1|WP_111721713.1|1418158_1419367_-|TNT-domain-containing-protein
MAAADRVSQGWVDLALSLVTIAVGVAAIVMTAGAATPLVVGAFVVGSGAVAYGASNLYEAGHNIYLGSVGDGLTVATNPLRDTLFMGNDRLYHQIGGLFTTASAALIPIGQTKSIAKGLTEFTIGEVGGFIGGQASYHGTKLLGGSEQDAQRATLVGNILGGIAASSAARRFSLNEPIAARVTKPTYNHQQLLKNLESSKLARESSRFKNYVAREKFTTTLAGMSSEDSQRYIQWYKYAKAGLGPVDRAKFQDWKFTPDIDLYLSNKHIYDNLDYFNQLDGSVIYPGTPESALGRIDGSVHNQGFLNGEYVDDIIDPGTLIDRYGNNNTGRYFSPAGASFGERALPPYMEKMPKKTYITIKPIPNKKGPVAPWFDQPGMGTQYFTDMEGGYLEKYGYLVEID

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Crispr_ID: NZ_LS483354_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LS483354_6

1709346-1709510

Orphan

I-C

Consensus_repeat	Method
AATGTCAATCCACGCTCCCATGAAGGGCGAGAC	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_LS483354_6

>merge|NZ_LS483354|6|1709346-1709510|CRISPRCasFinder
AATGTCAATCCACGCTCCCATGAAGGGCGAGACCTTTAAAGGTGGTTGGAACTGTGGGTTTAAAAAAATGTCAATCCACGCTCCCATGAAGGGCGAGACGATTGGGCGGAAATCCCAGAGATTACTTTTGACGATTTCAATCCACGCTCCCATAAAGAGAGCGAC

>NZ_LS483354|6|6|1709346-1709510|CRISPRCasFinder
AATGTCAATCCACGCTCCCATGAAGGGCGAGAC	CTTTAAAGGTGGTTGGAACTGTGGGTTTAAAAA
AATGTCAATCCACGCTCCCATGAAGGGCGAGAC	GATTGGGCGGAAATCCCAGAGATTACTTTTGAC
GATTTCAATCCACGCTCCCATAAAGAGAGCGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LS483354.1\|WP_012516211.1\|1710612_1711548_-\|manganese-dependent-inorganic-pyrophosphatase	unknown	unknown	gnl\|CDD\|235458
NZ_LS483354.1\|WP_012516203.1\|1701960_1703592_-\|polysaccharide-biosynthesis-protein	unknown	unknown	gnl\|CDD\|240529
NZ_LS483354.1\|WP_012516205.1\|1705382_1706162_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224045
NZ_LS483354.1\|WP_012677455.1\|1700359_1700950_-\|ATP-dependent-Clp-protease-proteolytic-subunit	unknown	unknown	gnl\|CDD\|178955
NZ_LS483354.1\|WP_012516213.1\|1712900_1714235_-\|HlyC/CorC-family-transporter	unknown	unknown	gnl\|CDD\|224173
NZ_LS483354.1\|WP_012516208.1\|1708157_1709156_+\|iron-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|376439
NZ_LS483354.1\|WP_012516206.1\|1706186_1707125_+\|iron-hydroxamate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|238558
NZ_LS483354.1\|WP_012516199.1\|1699523_1699808_-\|YlbG-family-protein	unknown	unknown	gnl\|CDD\|179410
NZ_LS483354.1\|WP_012516210.1\|1709892_1710546_-\|DUF1803-domain-containing-protein	unknown	unknown	gnl\|CDD\|370139
NZ_LS483354.1\|WP_012516204.1\|1703677_1705123_+\|UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L--lysine-ligase	unknown	unknown	gnl\|CDD\|237588
NZ_LS483354.1\|WP_012516212.1\|1712032_1712824_-\|pyruvate-formate-lyase-activating-protein	unknown	unknown	gnl\|CDD\|131546
NZ_LS483354.1\|WP_037584326.1\|1707135_1708161_+\|iron-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|376439
NZ_LS483354.1\|WP_038674750.1\|1717478_1718057_-\|ECF-transporter-S-component	unknown	unknown	gnl\|CDD\|226129
NZ_LS483354.1\|WP_012677437.1\|1720482_1720896_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LS483354.1\|WP_012516200.1\|1699808_1700255_-\|YlbF-family-regulator	unknown	unknown	gnl\|CDD\|226204
NZ_LS483354.1\|WP_041785703.1\|1718842_1719127_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LS483354.1\|WP_012677445.1\|1714362_1714920_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|377744
NZ_LS483354.1\|WP_012516202.1\|1701181_1701811_-\|uracil-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|234653
NZ_LS483354.1\|WP_012516216.1\|1715727_1716651_-\|TIGR01212-family-radical-SAM-protein	unknown	unknown	gnl\|CDD\|224163
NZ_LS483354.1\|WP_041785700.1\|1716841_1717489_-\|phosphatase-PAP2-family-protein	unknown	unknown	gnl\|CDD\|239486

Protein	Function_ID	Function_description	E-value
NZ_LS483354.1\|WP_012516211.1\|1710612_1711548_-\|manganese-dependent-inorganic-pyrophosphatase	gnl\|CDD\|235458	PRK05427, PRK05427, putative manganese-dependent inorganic pyrophosphatase; Provisional.	4.28339e-175
NZ_LS483354.1\|WP_012516203.1\|1701960_1703592_-\|polysaccharide-biosynthesis-protein	gnl\|CDD\|240529	cd13124, MATE_SpoVB_like, Stage V sporulation protein B, also known as Stage III sporulation protein F, and related proteins. The integral membrane protein SpoVB has been implicated in the biosynthesis of the peptidoglycan component of the spore cortex in Bacillus subtilis. This model represents a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins. Proteins from the MATE family are involved in exporting metabolites across the cell membrane and are often responsible for multidrug resistance (MDR).	1.58065e-108
NZ_LS483354.1\|WP_012516205.1\|1705382_1706162_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224045	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism].	6.6428e-123
NZ_LS483354.1\|WP_012677455.1\|1700359_1700950_-\|ATP-dependent-Clp-protease-proteolytic-subunit	gnl\|CDD\|178955	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed.	9.00747e-129
NZ_LS483354.1\|WP_012516213.1\|1712900_1714235_-\|HlyC/CorC-family-transporter	gnl\|CDD\|224173	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only].	2.07884e-131
NZ_LS483354.1\|WP_012516208.1\|1708157_1709156_+\|iron-ABC-transporter-permease	gnl\|CDD\|376439	pfam01032, FecCD, FecCD transport family. This is a sub-family of bacterial binding protein-dependent transport systems family. This Pfam entry contains the inner components of this multicomponent transport system.	1.54119e-79
NZ_LS483354.1\|WP_012516206.1\|1706186_1707125_+\|iron-hydroxamate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|238558	cd01138, FeuA, Periplasmic binding protein FeuA. These proteins have predicted to function as initial receptors in ABC transport of metal ions in some eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind their ligands in the cleft between these domains.	1.27772e-74
NZ_LS483354.1\|WP_012516199.1\|1699523_1699808_-\|YlbG-family-protein	gnl\|CDD\|179410	PRK02302, PRK02302, hypothetical protein; Provisional.	1.22244e-46
NZ_LS483354.1\|WP_012516210.1\|1709892_1710546_-\|DUF1803-domain-containing-protein	gnl\|CDD\|370139	pfam08820, DUF1803, Domain of unknown function (DUF1803). This small domain is found in one or two copies in proteins from bacteria. The function of this domain is unknown.	1.40256e-34
NZ_LS483354.1\|WP_012516204.1\|1703677_1705123_+\|UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L--lysine-ligase	gnl\|CDD\|237588	PRK14022, PRK14022, UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase.	0
NZ_LS483354.1\|WP_012516212.1\|1712032_1712824_-\|pyruvate-formate-lyase-activating-protein	gnl\|CDD\|131546	TIGR02493, PFLA, pyruvate formate-lyase 1-activating enzyme. An iron-sulfur protein with a radical-SAM domain (pfam04055). A single glycine residue in EC 2.3.1.54, formate C-acetyltransferase (formate-pyruvate lyase), is oxidized to the corresponding radical by transfer of H from its CH2 to AdoMet with concomitant cleavage of the latter. The reaction requires Fe2+. The first stage is reduction of the AdoMet to give methionine and the 5'-deoxyadenosin-5-yl radical, which then abstracts a hydrogen radical from the glycine residue. [Energy metabolism, Anaerobic, Protein fate, Protein modification and repair].	6.98891e-112
NZ_LS483354.1\|WP_037584326.1\|1707135_1708161_+\|iron-ABC-transporter-permease	gnl\|CDD\|376439	pfam01032, FecCD, FecCD transport family. This is a sub-family of bacterial binding protein-dependent transport systems family. This Pfam entry contains the inner components of this multicomponent transport system.	3.21669e-79
NZ_LS483354.1\|WP_038674750.1\|1717478_1718057_-\|ECF-transporter-S-component	gnl\|CDD\|226129	COG3601, COG3601, Predicted membrane protein [Function unknown].	5.85869e-52
NZ_LS483354.1\|WP_012516200.1\|1699808_1700255_-\|YlbF-family-regulator	gnl\|CDD\|226204	COG3679, COG3679, Regulatory protein involved in competence development and sporulation [Replication, recombination and repair; Signal transduction mechanisms].	1.10499e-11
NZ_LS483354.1\|WP_012677445.1\|1714362_1714920_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|377744	pfam06962, rRNA_methylase, Putative rRNA methylase. This family contains a number of putative rRNA methylases. Note that many family members are hypothetical proteins.	1.34774e-70
NZ_LS483354.1\|WP_012516202.1\|1701181_1701811_-\|uracil-phosphoribosyltransferase	gnl\|CDD\|234653	PRK00129, upp, uracil phosphoribosyltransferase; Reviewed.	1.87133e-147
NZ_LS483354.1\|WP_012516216.1\|1715727_1716651_-\|TIGR01212-family-radical-SAM-protein	gnl\|CDD\|224163	COG1242, COG1242, Predicted Fe-S oxidoreductase [General function prediction only].	0
NZ_LS483354.1\|WP_041785700.1\|1716841_1717489_-\|phosphatase-PAP2-family-protein	gnl\|CDD\|239486	cd03392, PAP2_like_2, PAP2_like_2 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.	1.04094e-53

>NZ_LS483354.1|WP_012516208.1|1708157_1709156_+|iron-ABC-transporter-permease
MTATKRHVPLFLGLSAGLVCLMIISLSIGDSSMSPLEVIKVLFGKSTAAMTLIITNIRLPRILAACIGGGSLALSGLLLQSLTRNPLADSGILGINAGAGMAITLVISYSTSDSLISRQWLSLITIFGAMATIVLVYLLSLSHGRINPIRLIVTGVGVSSMLSSLMIAFVGNVNRYKVDYVIHWLSGQLTGDDWSKLSIVAPLLGITWLLAFSQAYKLNIMALNDEASMALGFKLHQYRTIVLALSAILAALSVILVGNITFIGLIAGHTSKRLVGADHRLSLPVSLLIGMILLLLADTIGRVYLVGSNIPTGILVSILGAAYFLYLMVKMN
>NZ_LS483354.1|WP_037584326.1|1707135_1708161_+|iron-ABC-transporter-permease
MTAQHHTKPKLTKAAPPWLILTFISLTLVLAIYCSLRFGAVSLSHQELFHILLGKHGLGQKASIIWDIRLPRLILAALVGAALAVSGAIMQGITRNPIAEPGLLGINSGAGLALVIGYAFFPHLHYSIIILLSLLGSLLATLLILSLAYQTRKGYTQMRLILAGAMISMLLSAIGQGITTYCHLANAIIGWQAGGLIGVNWQMVSYVAPLIICGLVLSYLLAYHLTILSLSQEQAKALGQRTFLISLIFIGLVLLLSSAAVAVAGSISFVGLIIPHAITLVTAKDYRWILPLATLLGASFMLWVDFACRNINPPYETPLSALISFIGLPCFLWLVRKGGRF
>NZ_LS483354.1|WP_012516206.1|1706186_1707125_+|iron-hydroxamate-ABC-transporter-substrate-binding-protein
MKKLLLILTVFVTAFTLVACSSQSKQQESTSKASLSHKPKIAGVTYYGDIPAKPKRVVSLAATYTGYLAKLDLHLVGVTSYDKKNPVLTKSITQAKQVAATDLEAITALEPDLIVVGSTEENIDQLAKIAPLISIEYRKRDYLQVFSDFGRIFNKEKETNQWLADWKQKTSDYEKEVKQATGSAATFTIMGLYEKEIYLFGKDWGRGGEIIHQAFHYDAPEKVTKEVFKQGYLSLSQEVLPDYIGDYVVVAAEDDQTGSALYESDLWQQIPAVTNNHVIKVNANVFYFTDPLSLEHQLEVLKKAILSNGANH
>NZ_LS483354.1|WP_012516205.1|1705382_1706162_+|ABC-transporter-ATP-binding-protein
MSTISAERISAGYDQSLIISDLSVTIPEGKVTTIIGANGCGKSTLLKTLARLLPLKAGQVLLDGQAIARLATKDVARTLAVLPQLQEATTATVYELVSYGRYPHQSYLGRLSQADKDKICWAMEVTSMAPYAHQTVDALSGGQRQRAWIAMALAQDTDIIFLDEPTTYLDMNHQLDILELLKELNQVSGKTIVMVLHDLNLSARYSDHLIAMKNGDIKYSGEVNQVMTPEMIQDIFQVKAQLVTDPLYHCPTLLTYQLI
>NZ_LS483354.1|WP_012516204.1|1703677_1705123_+|UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L--lysine-ligase
MITIEHLLTILKKDHNFREVLDQDGYHFNYSGLQFDSLSYDSRQADEQTLFFAKGATFKADFLKQAIAKGLKIYVSEIDYQVGIPVILVNNIKHAMSLAAMAFYDYPQHKLKLLAFTGTKGKTTAAYFAYHMLKESHKPALLSTMNTTLDGKSFFKSQLTTPESLDLFAMMAQCVANGMTHLVMEVSSQAYLVGRVYGLIFDVGVFLNISPDHIGPIEHPSFEDYFYHKRLLMENSRAVVVNSGMEHFNILAEQVADKPHDFYGKGACNRLLQRQAFSFQAAGKLAGDYAIQLIGSFNQENAMAAGLACLRLGASLEDIRLGIAKTRVPGRMEVLTMTNQAKIVVDYAHNGDSLEKLLSVVEEHQKGQIYLILGAPGNKGESRRADFGQVINQHPNVRIILTADDPNFEDPQLISEEIASYIHREVDIIIDRKEAIKAGMERCQNEQDALIIAGKGADAYQIVKGQKTAYAGDLAIAKSYL
>NZ_LS483354.1|WP_012516203.1|1701960_1703592_-|polysaccharide-biosynthesis-protein
MSTEKKQLTQEQLMVQGAAWSTAGNFISRLLGVLYIIPWYIWMGQYAIQANALFNMGYNVYAYFLLISTTGLNVAIAKQVAKYNSMGQQEHSYQLIRSTLKVMLVLGLVFSVLMYLGSPLFARLSGGDETLVPIMHSLSLAVFVFPVMSVIRGIFQGYKEIKPYALSQIAEQLVRVIWMLLTTFFIMKMGSKDYIAAVTQSTFAAFIGMIASMAVLFYYFWTQGLLKAIFTKTEHAIPIDIKGLLIETLKESIPFIITGSAIQAFQLIDQWTFVNTMTLFTNYTRSQLWVLFGYFNANPAKITMVLIAVAASIGSVGIALLTENYVKKDMRAAARLIINNIEMLLMFLLPALTGAIILARPLYTVFYGSSEEQAVRLFVAVLCLTLLMALYTLFSPMLQALFENRKAIYYFAYGVFVKLVLQVPLIYLFHAYGPLLATTLGLLVPIYLMYRRLHQVTQFNRKLLHKRILLTVIETALMGLIVLLANWLLGYLFKPTGRLTSLLYLVIIGGLGMGVYAYMTLVTRQLDKLIGSRAARYRQKLGL
>NZ_LS483354.1|WP_012516202.1|1701181_1701811_-|uracil-phosphoribosyltransferase
MGKCQVISHPLIQHKLSILRRQDTSTKDFRELVNEIAMLMGYEVSRDLPLEDVEIQTPVAKTVQKQLAGKKLAIVPILRAGIGMVDGFLSLVPAAKVGHIGMYRNEETLEPVEYLVKLPEDIDQRQIFIVDPMLATGGSAILAVDSLKKRGAANIKFVCLVAAPEGVKKLQEAHPDVDIYTAALDERLNDHGYIVPGLGDAGDRLFGTK
>NZ_LS483354.1|WP_012677455.1|1700359_1700950_-|ATP-dependent-Clp-protease-proteolytic-subunit
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMNFIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAQNAGKTIKQIHKDAERDYWMSAEETLAYGFIDEIMENNELA
>NZ_LS483354.1|WP_012516200.1|1699808_1700255_-|YlbF-family-regulator
MLIINEELFAIEKAIEQLVQDIRTSSQYQAYALAKKAFEADLALQTELALFEELKQDYELRQDLLKSCPDARALRCQLLHQKRQLDLHPLVADLRLAQVDLQEVLATISTAIAEAVSEDILVDTGLPLATNRPRHELGPYQNIKEKST
>NZ_LS483354.1|WP_012516199.1|1699523_1699808_-|YlbG-family-protein
MFQKQQRIGLVIYLYYNRDARKVMKYGDLYYHSRRSRYLVIYINKEDMEEKLKDISRLTFVKEVKVSAFDDIDCDFVGNLHREPLEPQALPEQG
>NZ_LS483354.1|WP_012516210.1|1709892_1710546_-|DUF1803-domain-containing-protein
MIAIFNPDKLTRQPFFQDLVHYLNQHDDVTLRHIKQAFSHVKGIDKALEAYIQAGYICRKNRRYYLCLPLLDDLQQVTLEDLIFVDRASDLYEALLALVFETVLPNQTNQVLIKEKTTIDRDKLTLANYFYRLKRGEALSDEQLRLYALLGDVNQDYALKYMTSFLLKFARKEIVMQKRTDIFVNALELLGYIEKVEATKYCLKLAFDKEQLIFYAD
>NZ_LS483354.1|WP_012516211.1|1710612_1711548_-|manganese-dependent-inorganic-pyrophosphatase
MSKLLVFGHQNPDTDAIASSYAFDYLAKKAFDLDTEVVALGDPNEETAFALDYFGVSAPRVVTSAKAEGASHVILTDHNEFPQSISDIREVEVYGIVDHHRVANFETANPLYMRVEPVGSASSIVYRLFKENRVDVPKDIAGLLLSGLISDTLLLKSPTTHASDHRVAVELAELAGVKLEEYGMAMLKAGTNLASKSEAELIDIDAKTFELNGNAVRVAQVNTVDIAEVLERKEAIEAAIKEVMASEGYSDFVLMITDIVNSNSEILALGANMDKVETAFDFKLEDNHAFLAGAVSRKKQVVPQLTESFGA
>NZ_LS483354.1|WP_012516212.1|1712032_1712824_-|pyruvate-formate-lyase-activating-protein
MVEVDYGQVTGMVHSTESFGSVDGPGIRFIIFLQGCKMRCQYCHNPDTWAMETNQSQRRTVNDVLKEALQYRHFWGKKGGITVSGGEAMLQMDFITALFTEAKKLGIHTTLDTCGFAYRPTPEYHELLETLLAVTDLILLDLKEIDEEQHKLVTRQPNKNILQFARYLSDRQVPVWIRHVLVPGLTDIDDHLVRLDAFVKTLKNVDKFEVLPYHTMGEFKWRELGIPYQLEGVKPPTKERVENAKKLLHTESYTEYMNRIHQS
>NZ_LS483354.1|WP_012516213.1|1712900_1714235_-|HlyC/CorC-family-transporter
MEDPVSQPLLIQFLLLVILTLLNAFFSASEMALVSLNRSRVEQKAADGDKRYDRLLRVLEQPNNFLSTIQVGITFISLLSGASLSASLGQVISGWLGGSATAQTAGSIISLVFLTYVSIVLGELYPKRIAMNLKDKLAVVSAPVIIVLGKLVSPFVWLLSASTNLLSRITPMTFDDADERMTRDEIEYMLTNSEATLDAEEIEMLQGIFSLDEMMAREVMVPRTDAFMIDINDDTLDNIKEILKQSFSRIPVYDVDKDKVIGLIHTKRLLESGFRQGFENISMRKLLQEPLFVPETIFVDDLLRQLRNTQNQMAILLDEYGGVAGLVTLEDLLEEIVGEIDDETDKAEQFVHHIDDNTYIVTGTMTLNDFNEYFDTELESDDVDTIAGFYLTGIGTIPSQKEKESFACDSRQKHLVLVNDKVKDGRITKLKLTISNIEQNITED
>NZ_LS483354.1|WP_012677445.1|1714362_1714920_-|class-I-SAM-dependent-methyltransferase
MIKRPIHVSHEFLKEVLDKQSIAVDATMGNGYDTAFLASLSQRVYAFDVQQQALTKTQERLEQQGLTNAELILAGHEQVDQYVKEPIRAAIFNLGYLPNADKTLITRPETTILALAKILDRLELGGRIAIMVYYGHDGGSREKEALLDYIGQLDQRQVTAMLYQPINQMNQPPFLIMLEKIAATD
>NZ_LS483354.1|WP_012516216.1|1715727_1716651_-|TIGR01212-family-radical-SAM-protein
MTKRYQTLNEYYRRLFGAKIFKVPIDAGFDCPNRDGTVAHGGCTFCTVSGSGDAIVAPDAPIREQFYKEIDFMHRKWPEVNQYLVYFQNFTNTHDKLEVIRERYEQAINEPGVVGINIGTRPDCLPDETIAYLAELSERMHVTVELGLQTTYEATSQLINRAHSYDLYKETVQRLRQYPNINIVSHLINGLPGETHEMMIENVRRCVTDNDIQGIKLHLLHLMTNTRMQRDYHEGRLQLLSQKDYVSIICDQLEIIPEHIIIHRITGDAPRDMLIGPMWSLNKWEVLNAIDQEMERRNSWQGCKLKG
>NZ_LS483354.1|WP_041785700.1|1716841_1717489_-|phosphatase-PAP2-family-protein
MKHKQHLLLSSFAMLLFVVLGYIVKFFPEDLTSFDSQLQLALRGHLPEGLTQFFKGITVAGNVSTQAVIVAVAVLALLALSWRAEALFVLSNGVFAALLIWVLKLLYQRPRPSIEHLVHASGYSFPSGHSMGSLLIIGSLLIICHQRLQSASLRWLVDIALLALILLIGLSRIYLGVHYPSDVLAGYALGFGILQLLYPFYDQKRFEWRFQLKQK
>NZ_LS483354.1|WP_038674750.1|1717478_1718057_-|ECF-transporter-S-component
MSKTHRLVMVAILSAISFCLMFVGFSIIPGASFLKIDFSIIPILLGLVLMDLKQAYLILAVRTLLRLALNNHGVNDLIGIPMNVIAVALFITAFALIWHRQKGLVTYVLASLVGTGLLTLGMVVMNYVFAIPLYAKFAGFDIKASIGIARYIFTMVIPFNLLEGLIFAIVFYFVYIAGKPILERYPNSYHET
>NZ_LS483354.1|WP_041785703.1|1718842_1719127_-|hypothetical-protein
MIAIEMILTGQEPIRALKKELDRRLVQSICAPLTLGRLHALQRRYDGEVSRIATDTADHIQTIVNQLDSSIRGQGRTALEEAIKTQNRGYSSLM
>NZ_LS483354.1|WP_012677437.1|1720482_1720896_-|hypothetical-protein
MIVKKKVIILLGIVAILVMGGIFMFSYNQNQEQILERQFNHEQKRIVLYLLNHYSGINEIEFNDIENNSTTGSKNVLLTINNKIKMEVTFFNLNDDTDNYVISWNGKLSLIDKNPITHLSSIDKIKVKYWSNNDSNR

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_LS483354_5	5.1\|1406233\|30\|NZ_LS483354\|CRISPRCasFinder,CRT	1406233-1406262	30	NZ_LS483354.1	1910714-1910743	1	0.967

1. spacer 5.1|1406233|30|NZ_LS483354|CRISPRCasFinder,CRT matches to position: 1910714-1910743, mismatch: 1, identity: 0.967

tgttcaaaccattcattacacgtctcatct	CRISPR spacer
tgttcaacccattcattacacgtctcatct	Protospacer
******* **********************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_LS483354_2	2.4\|620691\|34\|NZ_LS483354\|PILER-CR,CRISPRCasFinder,CRT	620691-620724	34	MK448701	Streptococcus phage Javan197, complete genome	9540-9573	0	1.0
NZ_LS483354_2	2.4\|620691\|34\|NZ_LS483354\|PILER-CR,CRISPRCasFinder,CRT	620691-620724	34	MK448865	Streptococcus phage Javan182, complete genome	5170-5203	0	1.0
NZ_LS483354_2	2.4\|620691\|34\|NZ_LS483354\|PILER-CR,CRISPRCasFinder,CRT	620691-620724	34	MK448869	Streptococcus phage Javan190, complete genome	9540-9573	0	1.0
NZ_LS483354_2	2.4\|620691\|34\|NZ_LS483354\|PILER-CR,CRISPRCasFinder,CRT	620691-620724	34	MK448870	Streptococcus phage Javan192, complete genome	9540-9573	0	1.0
NZ_LS483354_2	2.5\|620757\|35\|NZ_LS483354\|PILER-CR,CRISPRCasFinder,CRT	620757-620791	35	MK448701	Streptococcus phage Javan197, complete genome	25721-25755	0	1.0
NZ_LS483354_2	2.5\|620757\|35\|NZ_LS483354\|PILER-CR,CRISPRCasFinder,CRT	620757-620791	35	MK448869	Streptococcus phage Javan190, complete genome	25721-25755	0	1.0
NZ_LS483354_2	2.5\|620757\|35\|NZ_LS483354\|PILER-CR,CRISPRCasFinder,CRT	620757-620791	35	MK448870	Streptococcus phage Javan192, complete genome	25721-25755	0	1.0
NZ_LS483354_5	5.3\|1406365\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406365-1406394	30	MK448852	Streptococcus phage Javan140, complete genome	20623-20652	0	1.0
NZ_LS483354_5	5.3\|1406365\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406365-1406394	30	MK448871	Streptococcus phage Javan196, complete genome	21579-21608	0	1.0
NZ_LS483354_5	5.3\|1406365\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406365-1406394	30	MK448784	Streptococcus phage Javan505, complete genome	21602-21631	0	1.0
NZ_LS483354_5	5.3\|1406365\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406365-1406394	30	MK448952	Streptococcus phage Javan472, complete genome	21107-21136	0	1.0
NZ_LS483354_5	5.3\|1406365\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406365-1406394	30	MK448779	Streptococcus phage Javan497, complete genome	20356-20385	0	1.0
NZ_LS483354_5	5.3\|1406365\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406365-1406394	30	MK448947	Streptococcus phage Javan458, complete genome	21602-21631	0	1.0
NZ_LS483354_5	5.3\|1406365\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406365-1406394	30	MK448976	Streptococcus phage Javan528, complete genome	20541-20570	0	1.0
NZ_LS483354_5	5.3\|1406365\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406365-1406394	30	MK448961	Streptococcus phage Javan494, complete genome	20534-20563	0	1.0
NZ_LS483354_5	5.3\|1406365\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406365-1406394	30	MK448697	Streptococcus phage Javan185, complete genome	21579-21608	0	1.0
NZ_LS483354_5	5.3\|1406365\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406365-1406394	30	MK448968	Streptococcus phage Javan512, complete genome	20356-20385	0	1.0
NZ_LS483354_5	5.3\|1406365\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406365-1406394	30	MK448693	Streptococcus phage Javan177, complete genome	21579-21608	0	1.0
NZ_LS483354_5	5.3\|1406365\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406365-1406394	30	MK448766	Streptococcus phage Javan465, complete genome	21501-21530	0	1.0
NZ_LS483354_5	5.3\|1406365\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406365-1406394	30	MK448696	Streptococcus phage Javan183, complete genome	21579-21608	0	1.0
NZ_LS483354_5	5.3\|1406365\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406365-1406394	30	NC_009819	Streptococcus phage P9, complete genome	20764-20793	0	1.0
NZ_LS483354_5	5.3\|1406365\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406365-1406394	30	MK448797	Streptococcus phage Javan531, complete genome	20356-20385	0	1.0
NZ_LS483354_5	5.3\|1406365\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406365-1406394	30	MK448689	Streptococcus phage Javan163, complete genome	21602-21631	0	1.0
NZ_LS483354_5	5.3\|1406365\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406365-1406394	30	MK448868	Streptococcus phage Javan188, complete genome	21579-21608	0	1.0
NZ_LS483354_5	5.3\|1406365\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406365-1406394	30	MK448866	Streptococcus phage Javan184, complete genome	21579-21608	0	1.0
NZ_LS483354_5	5.3\|1406365\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406365-1406394	30	MK448974	Streptococcus phage Javan524, complete genome	21602-21631	0	1.0
NZ_LS483354_5	5.3\|1406365\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406365-1406394	30	MK448699	Streptococcus phage Javan189, complete genome	21579-21608	0	1.0
NZ_LS483354_5	5.3\|1406365\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406365-1406394	30	MK448789	Streptococcus phage Javan513, complete genome	21601-21630	0	1.0
NZ_LS483354_5	5.3\|1406365\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406365-1406394	30	MK448678	Streptococcus phage Javan135, complete genome	20528-20557	0	1.0
NZ_LS483354_5	5.3\|1406365\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406365-1406394	30	NC_004589	Streptococcus prophage 315.6, complete genome	20453-20482	0	1.0
NZ_LS483354_5	5.3\|1406365\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406365-1406394	30	MK448867	Streptococcus phage Javan186, complete genome	21579-21608	0	1.0
NZ_LS483354_5	5.4\|1406431\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406431-1406460	30	MK448865	Streptococcus phage Javan182, complete genome	28703-28732	0	1.0
NZ_LS483354_5	5.5\|1406497\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406497-1406526	30	MK448681	Streptococcus phage Javan141, complete genome	5240-5269	0	1.0
NZ_LS483354_5	5.6\|1406563\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406563-1406592	30	MK448862	Streptococcus phage Javan178, complete genome	37480-37509	0	1.0
NZ_LS483354_5	5.7\|1406629\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406629-1406658	30	MK448686	Streptococcus phage Javan157, complete genome	26494-26523	0	1.0
NZ_LS483354_5	5.8\|1406695\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406695-1406724	30	MK448681	Streptococcus phage Javan141, complete genome	5240-5269	0	1.0
NZ_LS483354_5	5.10\|1406827\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406827-1406856	30	MK448862	Streptococcus phage Javan178, complete genome	17250-17279	0	1.0
NZ_LS483354_5	5.12\|1406959\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406959-1406988	30	MK448694	Streptococcus phage Javan179, complete genome	8012-8041	0	1.0
NZ_LS483354_5	5.14\|1407091\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1407091-1407120	30	MK448862	Streptococcus phage Javan178, complete genome	17742-17771	0	1.0
NZ_LS483354_2	2.2\|620559\|35\|NZ_LS483354\|PILER-CR,CRISPRCasFinder,CRT	620559-620593	35	MK448701	Streptococcus phage Javan197, complete genome	17394-17428	1	0.971
NZ_LS483354_2	2.2\|620559\|35\|NZ_LS483354\|PILER-CR,CRISPRCasFinder,CRT	620559-620593	35	MK448869	Streptococcus phage Javan190, complete genome	17395-17429	1	0.971
NZ_LS483354_2	2.2\|620559\|35\|NZ_LS483354\|PILER-CR,CRISPRCasFinder,CRT	620559-620593	35	MK448870	Streptococcus phage Javan192, complete genome	17395-17429	1	0.971
NZ_LS483354_2	2.9\|621023\|35\|NZ_LS483354\|CRISPRCasFinder,CRT	621023-621057	35	MK448862	Streptococcus phage Javan178, complete genome	35071-35105	1	0.971
NZ_LS483354_2	2.9\|621023\|35\|NZ_LS483354\|CRISPRCasFinder,CRT	621023-621057	35	MK448865	Streptococcus phage Javan182, complete genome	29844-29878	1	0.971
NZ_LS483354_2	2.9\|621023\|35\|NZ_LS483354\|CRISPRCasFinder,CRT	621023-621057	35	MK448864	Streptococcus phage Javan180, complete genome	27741-27775	1	0.971
NZ_LS483354_5	5.3\|1406365\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406365-1406394	30	MK448729	Streptococcus phage Javan31, complete genome	21383-21412	1	0.967
NZ_LS483354_5	5.3\|1406365\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406365-1406394	30	MK448691	Streptococcus phage Javan17, complete genome	21383-21412	1	0.967
NZ_LS483354_5	5.3\|1406365\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406365-1406394	30	MK448948	Streptococcus phage Javan46, complete genome	21327-21356	1	0.967
NZ_LS483354_5	5.3\|1406365\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406365-1406394	30	MK448768	Streptococcus phage Javan47, complete genome	23031-23060	1	0.967
NZ_LS483354_5	5.7\|1406629\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406629-1406658	30	MK448862	Streptococcus phage Javan178, complete genome	23662-23691	1	0.967
NZ_LS483354_5	5.13\|1407025\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1407025-1407054	30	MK448860	Streptococcus phage Javan172, complete genome	3524-3553	1	0.967
NZ_LS483354_5	5.16\|1407223\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1407223-1407252	30	MK448862	Streptococcus phage Javan178, complete genome	22889-22918	1	0.967
NZ_LS483354_2	2.2\|620559\|35\|NZ_LS483354\|PILER-CR,CRISPRCasFinder,CRT	620559-620593	35	MK448865	Streptococcus phage Javan182, complete genome	15304-15338	2	0.943
NZ_LS483354_2	2.8\|620956\|35\|NZ_LS483354\|PILER-CR,CRISPRCasFinder,CRT	620956-620990	35	MK448862	Streptococcus phage Javan178, complete genome	10464-10498	2	0.943
NZ_LS483354_2	2.8\|620956\|35\|NZ_LS483354\|PILER-CR,CRISPRCasFinder,CRT	620956-620990	35	MK448859	Streptococcus phage Javan170, complete genome	14630-14664	2	0.943
NZ_LS483354_2	2.8\|620956\|35\|NZ_LS483354\|PILER-CR,CRISPRCasFinder,CRT	620956-620990	35	MK448680	Streptococcus phage Javan139, complete genome	10193-10227	2	0.943
NZ_LS483354_2	2.8\|620956\|35\|NZ_LS483354\|PILER-CR,CRISPRCasFinder,CRT	620956-620990	35	MK448688	Streptococcus phage Javan161, complete genome	14584-14618	2	0.943
NZ_LS483354_5	5.7\|1406629\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406629-1406658	30	MK448951	Streptococcus phage Javan470, complete genome	25674-25703	2	0.933
NZ_LS483354_5	5.13\|1407025\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1407025-1407054	30	MK448969	Streptococcus phage Javan514, complete genome	1867-1896	2	0.933
NZ_LS483354_5	5.13\|1407025\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1407025-1407054	30	MK448763	Streptococcus phage Javan451, complete genome	1868-1897	2	0.933
NZ_LS483354_5	5.13\|1407025\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1407025-1407054	30	MK448773	Streptococcus phage Javan485, complete genome	1867-1896	2	0.933
NZ_LS483354_2	2.5\|620757\|35\|NZ_LS483354\|PILER-CR,CRISPRCasFinder,CRT	620757-620791	35	MK448865	Streptococcus phage Javan182, complete genome	23630-23664	3	0.914
NZ_LS483354_5	5.3\|1406365\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406365-1406394	30	NC_013940	Deferribacter desulfuricans SSM1 megaplasmid pDF308, complete sequence	255231-255260	3	0.9
NZ_LS483354_5	5.5\|1406497\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406497-1406526	30	MK448944	Streptococcus phage Javan452, complete genome	9308-9337	3	0.9
NZ_LS483354_5	5.5\|1406497\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406497-1406526	30	MK448849	Streptococcus phage Javan128, complete genome	4983-5012	3	0.9
NZ_LS483354_5	5.5\|1406497\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406497-1406526	30	MK448673	Streptococcus phage Javan119, complete genome	8258-8287	3	0.9
NZ_LS483354_5	5.5\|1406497\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406497-1406526	30	MK448767	Streptococcus phage Javan467, complete genome	5162-5191	3	0.9
NZ_LS483354_5	5.5\|1406497\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406497-1406526	30	MK448771	Streptococcus phage Javan481, complete genome	5162-5191	3	0.9
NZ_LS483354_5	5.5\|1406497\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406497-1406526	30	MK448973	Streptococcus phage Javan522, complete genome	7067-7096	3	0.9
NZ_LS483354_5	5.5\|1406497\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406497-1406526	30	MK448942	Streptococcus phage Javan448, complete genome	5162-5191	3	0.9
NZ_LS483354_5	5.5\|1406497\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406497-1406526	30	MK448775	Streptococcus phage Javan489, complete genome	9182-9211	3	0.9
NZ_LS483354_5	5.5\|1406497\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406497-1406526	30	NC_004586	Streptococcus pyogenes phage 315.3, complete genome	5267-5296	3	0.9
NZ_LS483354_5	5.5\|1406497\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406497-1406526	30	MK448969	Streptococcus phage Javan514, complete genome	8108-8137	3	0.9
NZ_LS483354_5	5.5\|1406497\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406497-1406526	30	MK448794	Streptococcus phage Javan525, complete genome	7377-7406	3	0.9
NZ_LS483354_5	5.5\|1406497\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406497-1406526	30	MK448964	Streptococcus phage Javan502, complete genome	5147-5176	3	0.9
NZ_LS483354_5	5.5\|1406497\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406497-1406526	30	MK448943	Streptococcus phage Javan450, complete genome	5162-5191	3	0.9
NZ_LS483354_5	5.5\|1406497\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406497-1406526	30	MK448972	Streptococcus phage Javan520, complete genome	5162-5191	3	0.9
NZ_LS483354_5	5.5\|1406497\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406497-1406526	30	MK448786	Streptococcus phage Javan509, complete genome	5162-5191	3	0.9
NZ_LS483354_5	5.5\|1406497\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406497-1406526	30	MK448774	Streptococcus phage Javan487, complete genome	5147-5176	3	0.9
NZ_LS483354_5	5.5\|1406497\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406497-1406526	30	MK448778	Streptococcus phage Javan493, complete genome	7082-7111	3	0.9
NZ_LS483354_5	5.5\|1406497\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406497-1406526	30	MK448963	Streptococcus phage Javan498, complete genome	1752-1781	3	0.9
NZ_LS483354_5	5.5\|1406497\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406497-1406526	30	MK448773	Streptococcus phage Javan485, complete genome	8108-8137	3	0.9
NZ_LS483354_5	5.5\|1406497\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406497-1406526	30	MK448958	Streptococcus phage Javan486, complete genome	7391-7420	3	0.9
NZ_LS483354_5	5.5\|1406497\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406497-1406526	30	MK448777	Streptococcus phage Javan491, complete genome	5521-5550	3	0.9
NZ_LS483354_5	5.5\|1406497\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406497-1406526	30	MK448765	Streptococcus phage Javan459, complete genome	7377-7406	3	0.9
NZ_LS483354_5	5.8\|1406695\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406695-1406724	30	MK448944	Streptococcus phage Javan452, complete genome	9308-9337	3	0.9
NZ_LS483354_5	5.8\|1406695\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406695-1406724	30	MK448849	Streptococcus phage Javan128, complete genome	4983-5012	3	0.9
NZ_LS483354_5	5.8\|1406695\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406695-1406724	30	MK448673	Streptococcus phage Javan119, complete genome	8258-8287	3	0.9
NZ_LS483354_5	5.8\|1406695\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406695-1406724	30	MK448767	Streptococcus phage Javan467, complete genome	5162-5191	3	0.9
NZ_LS483354_5	5.8\|1406695\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406695-1406724	30	MK448771	Streptococcus phage Javan481, complete genome	5162-5191	3	0.9
NZ_LS483354_5	5.8\|1406695\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406695-1406724	30	MK448973	Streptococcus phage Javan522, complete genome	7067-7096	3	0.9
NZ_LS483354_5	5.8\|1406695\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406695-1406724	30	MK448942	Streptococcus phage Javan448, complete genome	5162-5191	3	0.9
NZ_LS483354_5	5.8\|1406695\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406695-1406724	30	MK448775	Streptococcus phage Javan489, complete genome	9182-9211	3	0.9
NZ_LS483354_5	5.8\|1406695\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406695-1406724	30	NC_004586	Streptococcus pyogenes phage 315.3, complete genome	5267-5296	3	0.9
NZ_LS483354_5	5.8\|1406695\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406695-1406724	30	MK448969	Streptococcus phage Javan514, complete genome	8108-8137	3	0.9
NZ_LS483354_5	5.8\|1406695\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406695-1406724	30	MK448794	Streptococcus phage Javan525, complete genome	7377-7406	3	0.9
NZ_LS483354_5	5.8\|1406695\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406695-1406724	30	MK448964	Streptococcus phage Javan502, complete genome	5147-5176	3	0.9
NZ_LS483354_5	5.8\|1406695\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406695-1406724	30	MK448943	Streptococcus phage Javan450, complete genome	5162-5191	3	0.9
NZ_LS483354_5	5.8\|1406695\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406695-1406724	30	MK448972	Streptococcus phage Javan520, complete genome	5162-5191	3	0.9
NZ_LS483354_5	5.8\|1406695\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406695-1406724	30	MK448786	Streptococcus phage Javan509, complete genome	5162-5191	3	0.9
NZ_LS483354_5	5.8\|1406695\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406695-1406724	30	MK448774	Streptococcus phage Javan487, complete genome	5147-5176	3	0.9
NZ_LS483354_5	5.8\|1406695\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406695-1406724	30	MK448778	Streptococcus phage Javan493, complete genome	7082-7111	3	0.9
NZ_LS483354_5	5.8\|1406695\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406695-1406724	30	MK448963	Streptococcus phage Javan498, complete genome	1752-1781	3	0.9
NZ_LS483354_5	5.8\|1406695\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406695-1406724	30	MK448773	Streptococcus phage Javan485, complete genome	8108-8137	3	0.9
NZ_LS483354_5	5.8\|1406695\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406695-1406724	30	MK448958	Streptococcus phage Javan486, complete genome	7391-7420	3	0.9
NZ_LS483354_5	5.8\|1406695\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406695-1406724	30	MK448777	Streptococcus phage Javan491, complete genome	5521-5550	3	0.9
NZ_LS483354_5	5.8\|1406695\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406695-1406724	30	MK448765	Streptococcus phage Javan459, complete genome	7377-7406	3	0.9
NZ_LS483354_5	5.4\|1406431\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406431-1406460	30	MK448848	Streptococcus phage Javan126, complete genome	32774-32803	4	0.867
NZ_LS483354_5	5.4\|1406431\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406431-1406460	30	MK448857	Streptococcus phage Javan164, complete genome	32774-32803	4	0.867
NZ_LS483354_5	5.4\|1406431\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406431-1406460	30	MK448677	Streptococcus phage Javan133, complete genome	33774-33803	4	0.867
NZ_LS483354_5	5.9\|1406761\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406761-1406790	30	MK448794	Streptococcus phage Javan525, complete genome	33323-33352	4	0.867
NZ_LS483354_5	5.9\|1406761\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406761-1406790	30	MK448765	Streptococcus phage Javan459, complete genome	33321-33350	4	0.867
NZ_LS483354_5	5.2\|1406299\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406299-1406328	30	MH791411	UNVERIFIED: Escherichia phage Ecwhy_1, complete genome	349838-349867	5	0.833
NZ_LS483354_5	5.2\|1406299\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406299-1406328	30	MH494197	Escherichia phage CMSTMSU, complete genome	178191-178220	5	0.833
NZ_LS483354_5	5.3\|1406365\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406365-1406394	30	MT767754	Microcystis phage vB_MweS-yong1, complete genome	19860-19889	5	0.833
NZ_LS483354_5	5.3\|1406365\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406365-1406394	30	MK496795	Capybara microvirus Cap3_SP_446, complete genome	4666-4695	6	0.8
NZ_LS483354_5	5.11\|1406893\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406893-1406922	30	NZ_AP019409	Enterococcus faecium strain SMVRE20 plasmid pSMVRE20L, complete sequence	20005-20034	6	0.8
NZ_LS483354_5	5.16\|1407223\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1407223-1407252	30	NZ_CP044456	Acinetobacter indicus strain B18 plasmid pB18-1, complete sequence	236575-236604	6	0.8
NZ_LS483354_5	5.16\|1407223\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1407223-1407252	30	NZ_CP039144	Acinetobacter sp. 10FS3-1 plasmid p10FS3-1-1, complete sequence	60039-60068	6	0.8
NZ_LS483354_5	5.2\|1406299\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406299-1406328	30	NC_018855	Enterobacteria phage HX01, complete genome	93200-93229	7	0.767
NZ_LS483354_5	5.2\|1406299\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406299-1406328	30	AY303349	Enterobacteria phage RB69, complete genome	12955-12984	7	0.767
NZ_LS483354_5	5.3\|1406365\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406365-1406394	30	NZ_CP043858	Arcobacter cibarius strain H743 plasmid pACIB, complete sequence	44020-44049	7	0.767
NZ_LS483354_5	5.3\|1406365\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406365-1406394	30	NZ_CP030151	Bacillus velezensis strain DSYZ plasmid pDSYZ, complete sequence	17281-17310	7	0.767
NZ_LS483354_5	5.3\|1406365\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406365-1406394	30	NZ_CP026611	Bacillus velezensis strain CGMCC 11640 plasmid unnamed, complete sequence	56391-56420	7	0.767
NZ_LS483354_5	5.3\|1406365\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406365-1406394	30	NZ_CP009967	Bacillus cereus E33L plasmid pBCO_1, complete sequence	99150-99179	7	0.767
NZ_LS483354_5	5.3\|1406365\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406365-1406394	30	NC_007103	Bacillus cereus E33L plasmid pE33L466, complete sequence	223025-223054	7	0.767
NZ_LS483354_5	5.3\|1406365\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406365-1406394	30	NC_018689	Bacillus thuringiensis MC28 plasmid pMC429, complete sequence	276713-276742	7	0.767
NZ_LS483354_5	5.5\|1406497\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406497-1406526	30	MK448746	Streptococcus phage Javan383, complete genome	7985-8014	7	0.767
NZ_LS483354_5	5.5\|1406497\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406497-1406526	30	MK448753	Streptococcus phage Javan407, complete genome	6886-6915	7	0.767
NZ_LS483354_5	5.8\|1406695\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406695-1406724	30	MK448746	Streptococcus phage Javan383, complete genome	7985-8014	7	0.767
NZ_LS483354_5	5.8\|1406695\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406695-1406724	30	MK448753	Streptococcus phage Javan407, complete genome	6886-6915	7	0.767
NZ_LS483354_5	5.9\|1406761\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406761-1406790	30	NZ_CP017986	Klebsiella pneumoniae strain 825795-1 plasmid unnamed1, complete sequence	244340-244369	7	0.767
NZ_LS483354_5	5.9\|1406761\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406761-1406790	30	NZ_CP018714	Klebsiella pneumoniae strain Kp_Goe_152021 plasmid pKp_Goe_021-1, complete sequence	103503-103532	7	0.767
NZ_LS483354_5	5.9\|1406761\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406761-1406790	30	NZ_CP031736	Klebsiella pneumoniae subsp. pneumoniae strain Klebsiella pneumoniae plasmid pKPM502, complete sequence	241428-241457	7	0.767
NZ_LS483354_5	5.9\|1406761\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406761-1406790	30	NZ_CP018313	Klebsiella pneumoniae strain Kp_Goe_822579 plasmid pKp_Goe_579-1, complete sequence	190584-190613	7	0.767
NZ_LS483354_5	5.9\|1406761\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406761-1406790	30	NZ_CP018687	Klebsiella pneumoniae strain Kp_Goe_149473 plasmid pKp_Goe_473-1, complete sequence	212482-212511	7	0.767
NZ_LS483354_5	5.9\|1406761\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406761-1406790	30	JX316028	Erwinia phage phiEaH2, complete genome	87096-87125	7	0.767
NZ_LS483354_5	5.9\|1406761\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406761-1406790	30	NZ_CP018720	Klebsiella pneumoniae strain KP_Goe_828304 plasmid pKp_Goe_304-1, complete sequence	176531-176560	7	0.767
NZ_LS483354_5	5.9\|1406761\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406761-1406790	30	NZ_CP018702	Klebsiella pneumoniae strain Kp_Goe_827024 plasmid pKp_Goe_024-1, complete sequence	156974-157003	7	0.767
NZ_LS483354_5	5.9\|1406761\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406761-1406790	30	NZ_CP034054	Klebsiella pneumoniae strain KP_NORM_BLD_2015_112126 plasmid unnamed1, complete sequence	58250-58279	7	0.767
NZ_LS483354_5	5.9\|1406761\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406761-1406790	30	NZ_CP034046	Klebsiella pneumoniae strain KP_NORM_BLD_2014_104014 plasmid unnamed1, complete sequence	68272-68301	7	0.767
NZ_LS483354_5	5.9\|1406761\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406761-1406790	30	NZ_CP018696	Klebsiella pneumoniae strain Kp_Goe_149832 plasmid pKp_Goe_832-1, complete sequence	7354-7383	7	0.767
NZ_LS483354_5	5.9\|1406761\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406761-1406790	30	NZ_CP018708	Klebsiella pneumoniae strain Kp_Goe_827026 plasmid pKp_Goe_026-1, complete sequence	206629-206658	7	0.767
NZ_LS483354_5	5.10\|1406827\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406827-1406856	30	NZ_CP053207	Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1C, complete sequence	16051-16080	7	0.767
NZ_LS483354_5	5.11\|1406893\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406893-1406922	30	NC_016851	Aliivibrio fischeri strain KB1A-97 plasmid pKB1A97-67, complete sequence	34169-34198	7	0.767
NZ_LS483354_5	5.15\|1407157\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1407157-1407186	30	MN693843	Marine virus AFVG_250M254, complete genome	11243-11272	7	0.767
NZ_LS483354_5	5.2\|1406299\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406299-1406328	30	NC_021854	Lactococcus phage jm3, complete genome	14848-14877	8	0.733
NZ_LS483354_5	5.2\|1406299\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406299-1406328	30	MH359124	Escherichia phage SF, complete genome	109072-109101	8	0.733
NZ_LS483354_5	5.6\|1406563\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406563-1406592	30	NZ_CP009119	Borreliella valaisiana Tom4006 plasmid lp54, complete sequence	47721-47750	8	0.733
NZ_LS483354_5	5.7\|1406629\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406629-1406658	30	MN693615	Marine virus AFVG_250M1187, complete genome	2580-2609	8	0.733
NZ_LS483354_5	5.7\|1406629\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406629-1406658	30	MN693624	Marine virus AFVG_250M402, complete genome	2576-2605	8	0.733
NZ_LS483354_5	5.7\|1406629\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406629-1406658	30	MN693914	Marine virus AFVG_250M396, complete genome	2495-2524	8	0.733
NZ_LS483354_5	5.14\|1407091\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1407091-1407120	30	FJ870915	Sulfolobus spindle-shaped virus 6, complete genome	15365-15394	8	0.733
NZ_LS483354_5	5.17\|1407289\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1407289-1407318	30	MN871447	UNVERIFIED: Serratia phage KpLz_1_41, complete genome	300985-301014	8	0.733
NZ_LS483354_5	5.2\|1406299\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406299-1406328	30	NZ_CP014199	Escherichia coli strain MRE600 plasmid pMRE600-1, complete sequence	66256-66285	9	0.7
NZ_LS483354_5	5.2\|1406299\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1406299-1406328	30	NZ_CP042885	Escherichia coli O10:H32 strain NMBU-W12E19 plasmid pNMBU-W12E19_01, complete sequence	76547-76576	9	0.7
NZ_LS483354_5	5.13\|1407025\|30\|NZ_LS483354\|CRISPRCasFinder,CRT,PILER-CR	1407025-1407054	30	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	234946-234975	9	0.7

1. spacer 2.4|620691|34|NZ_LS483354|PILER-CR,CRISPRCasFinder,CRT matches to MK448701 (Streptococcus phage Javan197, complete genome) position: , mismatch: 0, identity: 1.0

ttttttgacatttttttgataagctacagcgatt	CRISPR spacer
ttttttgacatttttttgataagctacagcgatt	Protospacer
**********************************

2. spacer 2.4|620691|34|NZ_LS483354|PILER-CR,CRISPRCasFinder,CRT matches to MK448865 (Streptococcus phage Javan182, complete genome) position: , mismatch: 0, identity: 1.0

ttttttgacatttttttgataagctacagcgatt	CRISPR spacer
ttttttgacatttttttgataagctacagcgatt	Protospacer
**********************************

3. spacer 2.4|620691|34|NZ_LS483354|PILER-CR,CRISPRCasFinder,CRT matches to MK448869 (Streptococcus phage Javan190, complete genome) position: , mismatch: 0, identity: 1.0

ttttttgacatttttttgataagctacagcgatt	CRISPR spacer
ttttttgacatttttttgataagctacagcgatt	Protospacer
**********************************

4. spacer 2.4|620691|34|NZ_LS483354|PILER-CR,CRISPRCasFinder,CRT matches to MK448870 (Streptococcus phage Javan192, complete genome) position: , mismatch: 0, identity: 1.0

ttttttgacatttttttgataagctacagcgatt	CRISPR spacer
ttttttgacatttttttgataagctacagcgatt	Protospacer
**********************************

5. spacer 2.5|620757|35|NZ_LS483354|PILER-CR,CRISPRCasFinder,CRT matches to MK448701 (Streptococcus phage Javan197, complete genome) position: , mismatch: 0, identity: 1.0

gactgttaccctaataatttttttagttgtggttg	CRISPR spacer
gactgttaccctaataatttttttagttgtggttg	Protospacer
***********************************

6. spacer 2.5|620757|35|NZ_LS483354|PILER-CR,CRISPRCasFinder,CRT matches to MK448869 (Streptococcus phage Javan190, complete genome) position: , mismatch: 0, identity: 1.0

gactgttaccctaataatttttttagttgtggttg	CRISPR spacer
gactgttaccctaataatttttttagttgtggttg	Protospacer
***********************************

7. spacer 2.5|620757|35|NZ_LS483354|PILER-CR,CRISPRCasFinder,CRT matches to MK448870 (Streptococcus phage Javan192, complete genome) position: , mismatch: 0, identity: 1.0

gactgttaccctaataatttttttagttgtggttg	CRISPR spacer
gactgttaccctaataatttttttagttgtggttg	Protospacer
***********************************

8. spacer 5.3|1406365|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448852 (Streptococcus phage Javan140, complete genome) position: , mismatch: 0, identity: 1.0

atattgataatttacaaactatttttgata	CRISPR spacer
atattgataatttacaaactatttttgata	Protospacer
******************************

9. spacer 5.3|1406365|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448871 (Streptococcus phage Javan196, complete genome) position: , mismatch: 0, identity: 1.0

atattgataatttacaaactatttttgata	CRISPR spacer
atattgataatttacaaactatttttgata	Protospacer
******************************

10. spacer 5.3|1406365|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448784 (Streptococcus phage Javan505, complete genome) position: , mismatch: 0, identity: 1.0

atattgataatttacaaactatttttgata	CRISPR spacer
atattgataatttacaaactatttttgata	Protospacer
******************************

11. spacer 5.3|1406365|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448952 (Streptococcus phage Javan472, complete genome) position: , mismatch: 0, identity: 1.0

atattgataatttacaaactatttttgata	CRISPR spacer
atattgataatttacaaactatttttgata	Protospacer
******************************

12. spacer 5.3|1406365|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448779 (Streptococcus phage Javan497, complete genome) position: , mismatch: 0, identity: 1.0

atattgataatttacaaactatttttgata	CRISPR spacer
atattgataatttacaaactatttttgata	Protospacer
******************************

13. spacer 5.3|1406365|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448947 (Streptococcus phage Javan458, complete genome) position: , mismatch: 0, identity: 1.0

atattgataatttacaaactatttttgata	CRISPR spacer
atattgataatttacaaactatttttgata	Protospacer
******************************

14. spacer 5.3|1406365|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448976 (Streptococcus phage Javan528, complete genome) position: , mismatch: 0, identity: 1.0

atattgataatttacaaactatttttgata	CRISPR spacer
atattgataatttacaaactatttttgata	Protospacer
******************************

15. spacer 5.3|1406365|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448961 (Streptococcus phage Javan494, complete genome) position: , mismatch: 0, identity: 1.0

atattgataatttacaaactatttttgata	CRISPR spacer
atattgataatttacaaactatttttgata	Protospacer
******************************

16. spacer 5.3|1406365|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448697 (Streptococcus phage Javan185, complete genome) position: , mismatch: 0, identity: 1.0

atattgataatttacaaactatttttgata	CRISPR spacer
atattgataatttacaaactatttttgata	Protospacer
******************************

17. spacer 5.3|1406365|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448968 (Streptococcus phage Javan512, complete genome) position: , mismatch: 0, identity: 1.0

atattgataatttacaaactatttttgata	CRISPR spacer
atattgataatttacaaactatttttgata	Protospacer
******************************

18. spacer 5.3|1406365|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448693 (Streptococcus phage Javan177, complete genome) position: , mismatch: 0, identity: 1.0

atattgataatttacaaactatttttgata	CRISPR spacer
atattgataatttacaaactatttttgata	Protospacer
******************************

19. spacer 5.3|1406365|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448766 (Streptococcus phage Javan465, complete genome) position: , mismatch: 0, identity: 1.0

atattgataatttacaaactatttttgata	CRISPR spacer
atattgataatttacaaactatttttgata	Protospacer
******************************

20. spacer 5.3|1406365|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448696 (Streptococcus phage Javan183, complete genome) position: , mismatch: 0, identity: 1.0

atattgataatttacaaactatttttgata	CRISPR spacer
atattgataatttacaaactatttttgata	Protospacer
******************************

21. spacer 5.3|1406365|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to NC_009819 (Streptococcus phage P9, complete genome) position: , mismatch: 0, identity: 1.0

atattgataatttacaaactatttttgata	CRISPR spacer
atattgataatttacaaactatttttgata	Protospacer
******************************

22. spacer 5.3|1406365|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448797 (Streptococcus phage Javan531, complete genome) position: , mismatch: 0, identity: 1.0

atattgataatttacaaactatttttgata	CRISPR spacer
atattgataatttacaaactatttttgata	Protospacer
******************************

23. spacer 5.3|1406365|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448689 (Streptococcus phage Javan163, complete genome) position: , mismatch: 0, identity: 1.0

atattgataatttacaaactatttttgata	CRISPR spacer
atattgataatttacaaactatttttgata	Protospacer
******************************

24. spacer 5.3|1406365|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448868 (Streptococcus phage Javan188, complete genome) position: , mismatch: 0, identity: 1.0

atattgataatttacaaactatttttgata	CRISPR spacer
atattgataatttacaaactatttttgata	Protospacer
******************************

25. spacer 5.3|1406365|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448866 (Streptococcus phage Javan184, complete genome) position: , mismatch: 0, identity: 1.0

atattgataatttacaaactatttttgata	CRISPR spacer
atattgataatttacaaactatttttgata	Protospacer
******************************

26. spacer 5.3|1406365|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448974 (Streptococcus phage Javan524, complete genome) position: , mismatch: 0, identity: 1.0

atattgataatttacaaactatttttgata	CRISPR spacer
atattgataatttacaaactatttttgata	Protospacer
******************************

27. spacer 5.3|1406365|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448699 (Streptococcus phage Javan189, complete genome) position: , mismatch: 0, identity: 1.0

atattgataatttacaaactatttttgata	CRISPR spacer
atattgataatttacaaactatttttgata	Protospacer
******************************

28. spacer 5.3|1406365|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448789 (Streptococcus phage Javan513, complete genome) position: , mismatch: 0, identity: 1.0

atattgataatttacaaactatttttgata	CRISPR spacer
atattgataatttacaaactatttttgata	Protospacer
******************************

29. spacer 5.3|1406365|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448678 (Streptococcus phage Javan135, complete genome) position: , mismatch: 0, identity: 1.0

atattgataatttacaaactatttttgata	CRISPR spacer
atattgataatttacaaactatttttgata	Protospacer
******************************

30. spacer 5.3|1406365|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to NC_004589 (Streptococcus prophage 315.6, complete genome) position: , mismatch: 0, identity: 1.0

atattgataatttacaaactatttttgata	CRISPR spacer
atattgataatttacaaactatttttgata	Protospacer
******************************

31. spacer 5.3|1406365|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448867 (Streptococcus phage Javan186, complete genome) position: , mismatch: 0, identity: 1.0

atattgataatttacaaactatttttgata	CRISPR spacer
atattgataatttacaaactatttttgata	Protospacer
******************************

32. spacer 5.4|1406431|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448865 (Streptococcus phage Javan182, complete genome) position: , mismatch: 0, identity: 1.0

ccgtaaacacgtcataggcttggtactgac	CRISPR spacer
ccgtaaacacgtcataggcttggtactgac	Protospacer
******************************

33. spacer 5.5|1406497|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448681 (Streptococcus phage Javan141, complete genome) position: , mismatch: 0, identity: 1.0

ttgagggattgtatgagcaaatccaatgat	CRISPR spacer
ttgagggattgtatgagcaaatccaatgat	Protospacer
******************************

34. spacer 5.6|1406563|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448862 (Streptococcus phage Javan178, complete genome) position: , mismatch: 0, identity: 1.0

tataaattgcagcagttagcatttttaaat	CRISPR spacer
tataaattgcagcagttagcatttttaaat	Protospacer
******************************

35. spacer 5.7|1406629|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448686 (Streptococcus phage Javan157, complete genome) position: , mismatch: 0, identity: 1.0

ttaccatcatctttccactgtctgatagct	CRISPR spacer
ttaccatcatctttccactgtctgatagct	Protospacer
******************************

36. spacer 5.8|1406695|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448681 (Streptococcus phage Javan141, complete genome) position: , mismatch: 0, identity: 1.0

ttgagggattgtatgagcaaatccaatgat	CRISPR spacer
ttgagggattgtatgagcaaatccaatgat	Protospacer
******************************

37. spacer 5.10|1406827|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448862 (Streptococcus phage Javan178, complete genome) position: , mismatch: 0, identity: 1.0

tcgcctgtgtgccaaaaccagcgccgacta	CRISPR spacer
tcgcctgtgtgccaaaaccagcgccgacta	Protospacer
******************************

38. spacer 5.12|1406959|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448694 (Streptococcus phage Javan179, complete genome) position: , mismatch: 0, identity: 1.0

attgcgtaaagggtagctgtagcctctaca	CRISPR spacer
attgcgtaaagggtagctgtagcctctaca	Protospacer
******************************

39. spacer 5.14|1407091|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448862 (Streptococcus phage Javan178, complete genome) position: , mismatch: 0, identity: 1.0

gagataagtagcagtatacaagatgattta	CRISPR spacer
gagataagtagcagtatacaagatgattta	Protospacer
******************************

40. spacer 2.2|620559|35|NZ_LS483354|PILER-CR,CRISPRCasFinder,CRT matches to MK448701 (Streptococcus phage Javan197, complete genome) position: , mismatch: 1, identity: 0.971

aaaaaatcaactagccactggtttcctttacgaac	CRISPR spacer
aaaaaatcaactagccactggtttccgttacgaac	Protospacer
************************** ********

41. spacer 2.2|620559|35|NZ_LS483354|PILER-CR,CRISPRCasFinder,CRT matches to MK448869 (Streptococcus phage Javan190, complete genome) position: , mismatch: 1, identity: 0.971

aaaaaatcaactagccactggtttcctttacgaac	CRISPR spacer
aaaaaatcaactagccactggtttccgttacgaac	Protospacer
************************** ********

42. spacer 2.2|620559|35|NZ_LS483354|PILER-CR,CRISPRCasFinder,CRT matches to MK448870 (Streptococcus phage Javan192, complete genome) position: , mismatch: 1, identity: 0.971

aaaaaatcaactagccactggtttcctttacgaac	CRISPR spacer
aaaaaatcaactagccactggtttccgttacgaac	Protospacer
************************** ********

43. spacer 2.9|621023|35|NZ_LS483354|CRISPRCasFinder,CRT matches to MK448862 (Streptococcus phage Javan178, complete genome) position: , mismatch: 1, identity: 0.971

ccgacactgcgaactaatcatttgtgactcctttc	CRISPR spacer
tcgacactgcgaactaatcatttgtgactcctttc	Protospacer
.**********************************

44. spacer 2.9|621023|35|NZ_LS483354|CRISPRCasFinder,CRT matches to MK448865 (Streptococcus phage Javan182, complete genome) position: , mismatch: 1, identity: 0.971

ccgacactgcgaactaatcatttgtgactcctttc	CRISPR spacer
tcgacactgcgaactaatcatttgtgactcctttc	Protospacer
.**********************************

45. spacer 2.9|621023|35|NZ_LS483354|CRISPRCasFinder,CRT matches to MK448864 (Streptococcus phage Javan180, complete genome) position: , mismatch: 1, identity: 0.971

ccgacactgcgaactaatcatttgtgactcctttc	CRISPR spacer
tcgacactgcgaactaatcatttgtgactcctttc	Protospacer
.**********************************

46. spacer 5.3|1406365|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448729 (Streptococcus phage Javan31, complete genome) position: , mismatch: 1, identity: 0.967

atattgataatttacaaactatttttgata	CRISPR spacer
atattgataatttacaaattatttttgata	Protospacer
******************.***********

47. spacer 5.3|1406365|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448691 (Streptococcus phage Javan17, complete genome) position: , mismatch: 1, identity: 0.967

atattgataatttacaaactatttttgata	CRISPR spacer
atattgataatttacaaattatttttgata	Protospacer
******************.***********

48. spacer 5.3|1406365|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448948 (Streptococcus phage Javan46, complete genome) position: , mismatch: 1, identity: 0.967

atattgataatttacaaactatttttgata	CRISPR spacer
atattgataatttacaaattatttttgata	Protospacer
******************.***********

49. spacer 5.3|1406365|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448768 (Streptococcus phage Javan47, complete genome) position: , mismatch: 1, identity: 0.967

atattgataatttacaaactatttttgata	CRISPR spacer
atattgataatttacaaattatttttgata	Protospacer
******************.***********

50. spacer 5.7|1406629|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448862 (Streptococcus phage Javan178, complete genome) position: , mismatch: 1, identity: 0.967

ttaccatcatctttccactgtctgatagct	CRISPR spacer
ttgccatcatctttccactgtctgatagct	Protospacer
**.***************************

51. spacer 5.13|1407025|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448860 (Streptococcus phage Javan172, complete genome) position: , mismatch: 1, identity: 0.967

taatgtagagttagcttatttcgacaatga	CRISPR spacer
taatgtagaattagcttatttcgacaatga	Protospacer
*********.********************

52. spacer 5.16|1407223|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448862 (Streptococcus phage Javan178, complete genome) position: , mismatch: 1, identity: 0.967

tcttaatgcgtatgaaaagcagattattga	CRISPR spacer
tcttaatacgtatgaaaagcagattattga	Protospacer
*******.**********************

53. spacer 2.2|620559|35|NZ_LS483354|PILER-CR,CRISPRCasFinder,CRT matches to MK448865 (Streptococcus phage Javan182, complete genome) position: , mismatch: 2, identity: 0.943

aaaaaatcaactagccactggtttcctttacgaac	CRISPR spacer
aaaaaatcaactagccactggtttccggtacgaac	Protospacer
**************************  *******

54. spacer 2.8|620956|35|NZ_LS483354|PILER-CR,CRISPRCasFinder,CRT matches to MK448862 (Streptococcus phage Javan178, complete genome) position: , mismatch: 2, identity: 0.943

cacatatagcggaacaatcggacgctatcatggag	CRISPR spacer
cacatgtagcggaacaatcgggcgctatcatggag	Protospacer
*****.***************.*************

55. spacer 2.8|620956|35|NZ_LS483354|PILER-CR,CRISPRCasFinder,CRT matches to MK448859 (Streptococcus phage Javan170, complete genome) position: , mismatch: 2, identity: 0.943

cacatatagcggaacaatcggacgctatcatggag	CRISPR spacer
cacatgtagcggaacaatcgggcgctatcatggag	Protospacer
*****.***************.*************

56. spacer 2.8|620956|35|NZ_LS483354|PILER-CR,CRISPRCasFinder,CRT matches to MK448680 (Streptococcus phage Javan139, complete genome) position: , mismatch: 2, identity: 0.943

cacatatagcggaacaatcggacgctatcatggag	CRISPR spacer
cacatgtagcggaacaatcgggcgctatcatggag	Protospacer
*****.***************.*************

57. spacer 2.8|620956|35|NZ_LS483354|PILER-CR,CRISPRCasFinder,CRT matches to MK448688 (Streptococcus phage Javan161, complete genome) position: , mismatch: 2, identity: 0.943

cacatatagcggaacaatcggacgctatcatggag	CRISPR spacer
cacatgtagcggaacaatcgggcgctatcatggag	Protospacer
*****.***************.*************

58. spacer 5.7|1406629|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448951 (Streptococcus phage Javan470, complete genome) position: , mismatch: 2, identity: 0.933

ttaccatcatctttccactgtctgatagct	CRISPR spacer
ttaccatcatcttcccactgcctgatagct	Protospacer
*************.******.*********

59. spacer 5.13|1407025|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448969 (Streptococcus phage Javan514, complete genome) position: , mismatch: 2, identity: 0.933

taatgtagagttagcttatttcgacaatga	CRISPR spacer
taatgtagaattagcttatttcgataatga	Protospacer
*********.**************.*****

60. spacer 5.13|1407025|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448763 (Streptococcus phage Javan451, complete genome) position: , mismatch: 2, identity: 0.933

taatgtagagttagcttatttcgacaatga	CRISPR spacer
taatgtagaattagcttatttcgataatga	Protospacer
*********.**************.*****

61. spacer 5.13|1407025|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448773 (Streptococcus phage Javan485, complete genome) position: , mismatch: 2, identity: 0.933

taatgtagagttagcttatttcgacaatga	CRISPR spacer
taatgtagaattagcttatttcgataatga	Protospacer
*********.**************.*****

62. spacer 2.5|620757|35|NZ_LS483354|PILER-CR,CRISPRCasFinder,CRT matches to MK448865 (Streptococcus phage Javan182, complete genome) position: , mismatch: 3, identity: 0.914

gactgttaccctaataatttttttagttgtggttg	CRISPR spacer
aacggttaccctaataatttttttagtggtggttg	Protospacer
.** *********************** *******

63. spacer 5.3|1406365|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to NC_013940 (Deferribacter desulfuricans SSM1 megaplasmid pDF308, complete sequence) position: , mismatch: 3, identity: 0.9

-atattgataatttacaaactatttttgata	CRISPR spacer
gatatt-ataatttacaaaatattttggata	Protospacer
 ***** ************ ****** ****

64. spacer 5.5|1406497|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448944 (Streptococcus phage Javan452, complete genome) position: , mismatch: 3, identity: 0.9

ttgagggattgtatgagcaaatccaatgat	CRISPR spacer
ttgagggattgtatgagcaagttcaatgac	Protospacer
********************.*.******.

65. spacer 5.5|1406497|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448849 (Streptococcus phage Javan128, complete genome) position: , mismatch: 3, identity: 0.9

ttgagggattgtatgagcaaatccaatgat	CRISPR spacer
ttgagggattgtatgagcaagttcaatgac	Protospacer
********************.*.******.

66. spacer 5.5|1406497|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448673 (Streptococcus phage Javan119, complete genome) position: , mismatch: 3, identity: 0.9

ttgagggattgtatgagcaaatccaatgat	CRISPR spacer
ttgagggattgtatgagcaagttcaatgac	Protospacer
********************.*.******.

67. spacer 5.5|1406497|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448767 (Streptococcus phage Javan467, complete genome) position: , mismatch: 3, identity: 0.9

ttgagggattgtatgagcaaatccaatgat	CRISPR spacer
tcgagggattatgtgagcaaatccaatgat	Protospacer
*.********.*.*****************

68. spacer 5.5|1406497|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448771 (Streptococcus phage Javan481, complete genome) position: , mismatch: 3, identity: 0.9

ttgagggattgtatgagcaaatccaatgat	CRISPR spacer
tcgagggattatgtgagcaaatccaatgat	Protospacer
*.********.*.*****************

69. spacer 5.5|1406497|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448973 (Streptococcus phage Javan522, complete genome) position: , mismatch: 3, identity: 0.9

ttgagggattgtatgagcaaatccaatgat	CRISPR spacer
tcgagggattatgtgagcaaatccaatgat	Protospacer
*.********.*.*****************

70. spacer 5.5|1406497|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448942 (Streptococcus phage Javan448, complete genome) position: , mismatch: 3, identity: 0.9

ttgagggattgtatgagcaaatccaatgat	CRISPR spacer
tcgagggattatgtgagcaaatccaatgat	Protospacer
*.********.*.*****************

71. spacer 5.5|1406497|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448775 (Streptococcus phage Javan489, complete genome) position: , mismatch: 3, identity: 0.9

ttgagggattgtatgagcaaatccaatgat	CRISPR spacer
tcgagggattatgtgagcaaatccaatgat	Protospacer
*.********.*.*****************

72. spacer 5.5|1406497|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to NC_004586 (Streptococcus pyogenes phage 315.3, complete genome) position: , mismatch: 3, identity: 0.9

ttgagggattgtatgagcaaatccaatgat	CRISPR spacer
tcgagggattatgtgagcaaatccaatgat	Protospacer
*.********.*.*****************

73. spacer 5.5|1406497|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448969 (Streptococcus phage Javan514, complete genome) position: , mismatch: 3, identity: 0.9

ttgagggattgtatgagcaaatccaatgat	CRISPR spacer
tcgagggattatgtgagcaaatccaatgat	Protospacer
*.********.*.*****************

74. spacer 5.5|1406497|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448794 (Streptococcus phage Javan525, complete genome) position: , mismatch: 3, identity: 0.9

ttgagggattgtatgagcaaatccaatgat	CRISPR spacer
tcgagggattatgtgagcaaatccaatgat	Protospacer
*.********.*.*****************

75. spacer 5.5|1406497|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448964 (Streptococcus phage Javan502, complete genome) position: , mismatch: 3, identity: 0.9

ttgagggattgtatgagcaaatccaatgat	CRISPR spacer
tcgagggattatgtgagcaaatccaatgat	Protospacer
*.********.*.*****************

76. spacer 5.5|1406497|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448943 (Streptococcus phage Javan450, complete genome) position: , mismatch: 3, identity: 0.9

ttgagggattgtatgagcaaatccaatgat	CRISPR spacer
tcgagggattatgtgagcaaatccaatgat	Protospacer
*.********.*.*****************

77. spacer 5.5|1406497|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448972 (Streptococcus phage Javan520, complete genome) position: , mismatch: 3, identity: 0.9

ttgagggattgtatgagcaaatccaatgat	CRISPR spacer
tcgagggattatgtgagcaaatccaatgat	Protospacer
*.********.*.*****************

78. spacer 5.5|1406497|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448786 (Streptococcus phage Javan509, complete genome) position: , mismatch: 3, identity: 0.9

ttgagggattgtatgagcaaatccaatgat	CRISPR spacer
tcgagggattatgtgagcaaatccaatgat	Protospacer
*.********.*.*****************

79. spacer 5.5|1406497|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448774 (Streptococcus phage Javan487, complete genome) position: , mismatch: 3, identity: 0.9

ttgagggattgtatgagcaaatccaatgat	CRISPR spacer
tcgagggattatgtgagcaaatccaatgat	Protospacer
*.********.*.*****************

80. spacer 5.5|1406497|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448778 (Streptococcus phage Javan493, complete genome) position: , mismatch: 3, identity: 0.9

ttgagggattgtatgagcaaatccaatgat	CRISPR spacer
tcgagggattatgtgagcaaatccaatgat	Protospacer
*.********.*.*****************

81. spacer 5.5|1406497|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448963 (Streptococcus phage Javan498, complete genome) position: , mismatch: 3, identity: 0.9

ttgagggattgtatgagcaaatccaatgat	CRISPR spacer
tcgagggattatgtgagcaaatccaatgat	Protospacer
*.********.*.*****************

82. spacer 5.5|1406497|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448773 (Streptococcus phage Javan485, complete genome) position: , mismatch: 3, identity: 0.9

ttgagggattgtatgagcaaatccaatgat	CRISPR spacer
tcgagggattatgtgagcaaatccaatgat	Protospacer
*.********.*.*****************

83. spacer 5.5|1406497|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448958 (Streptococcus phage Javan486, complete genome) position: , mismatch: 3, identity: 0.9

ttgagggattgtatgagcaaatccaatgat	CRISPR spacer
tcgagggattatgtgagcaaatccaatgat	Protospacer
*.********.*.*****************

84. spacer 5.5|1406497|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448777 (Streptococcus phage Javan491, complete genome) position: , mismatch: 3, identity: 0.9

ttgagggattgtatgagcaaatccaatgat	CRISPR spacer
tcgagggattatgtgagcaaatccaatgat	Protospacer
*.********.*.*****************

85. spacer 5.5|1406497|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448765 (Streptococcus phage Javan459, complete genome) position: , mismatch: 3, identity: 0.9

ttgagggattgtatgagcaaatccaatgat	CRISPR spacer
tcgagggattatgtgagcaaatccaatgat	Protospacer
*.********.*.*****************

86. spacer 5.8|1406695|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448944 (Streptococcus phage Javan452, complete genome) position: , mismatch: 3, identity: 0.9

ttgagggattgtatgagcaaatccaatgat	CRISPR spacer
ttgagggattgtatgagcaagttcaatgac	Protospacer
********************.*.******.

87. spacer 5.8|1406695|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448849 (Streptococcus phage Javan128, complete genome) position: , mismatch: 3, identity: 0.9

ttgagggattgtatgagcaaatccaatgat	CRISPR spacer
ttgagggattgtatgagcaagttcaatgac	Protospacer
********************.*.******.

88. spacer 5.8|1406695|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448673 (Streptococcus phage Javan119, complete genome) position: , mismatch: 3, identity: 0.9

ttgagggattgtatgagcaaatccaatgat	CRISPR spacer
ttgagggattgtatgagcaagttcaatgac	Protospacer
********************.*.******.

89. spacer 5.8|1406695|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448767 (Streptococcus phage Javan467, complete genome) position: , mismatch: 3, identity: 0.9

ttgagggattgtatgagcaaatccaatgat	CRISPR spacer
tcgagggattatgtgagcaaatccaatgat	Protospacer
*.********.*.*****************

90. spacer 5.8|1406695|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448771 (Streptococcus phage Javan481, complete genome) position: , mismatch: 3, identity: 0.9

ttgagggattgtatgagcaaatccaatgat	CRISPR spacer
tcgagggattatgtgagcaaatccaatgat	Protospacer
*.********.*.*****************

91. spacer 5.8|1406695|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448973 (Streptococcus phage Javan522, complete genome) position: , mismatch: 3, identity: 0.9

ttgagggattgtatgagcaaatccaatgat	CRISPR spacer
tcgagggattatgtgagcaaatccaatgat	Protospacer
*.********.*.*****************

92. spacer 5.8|1406695|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448942 (Streptococcus phage Javan448, complete genome) position: , mismatch: 3, identity: 0.9

ttgagggattgtatgagcaaatccaatgat	CRISPR spacer
tcgagggattatgtgagcaaatccaatgat	Protospacer
*.********.*.*****************

93. spacer 5.8|1406695|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448775 (Streptococcus phage Javan489, complete genome) position: , mismatch: 3, identity: 0.9

ttgagggattgtatgagcaaatccaatgat	CRISPR spacer
tcgagggattatgtgagcaaatccaatgat	Protospacer
*.********.*.*****************

94. spacer 5.8|1406695|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to NC_004586 (Streptococcus pyogenes phage 315.3, complete genome) position: , mismatch: 3, identity: 0.9

ttgagggattgtatgagcaaatccaatgat	CRISPR spacer
tcgagggattatgtgagcaaatccaatgat	Protospacer
*.********.*.*****************

95. spacer 5.8|1406695|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448969 (Streptococcus phage Javan514, complete genome) position: , mismatch: 3, identity: 0.9

ttgagggattgtatgagcaaatccaatgat	CRISPR spacer
tcgagggattatgtgagcaaatccaatgat	Protospacer
*.********.*.*****************

96. spacer 5.8|1406695|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448794 (Streptococcus phage Javan525, complete genome) position: , mismatch: 3, identity: 0.9

ttgagggattgtatgagcaaatccaatgat	CRISPR spacer
tcgagggattatgtgagcaaatccaatgat	Protospacer
*.********.*.*****************

97. spacer 5.8|1406695|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448964 (Streptococcus phage Javan502, complete genome) position: , mismatch: 3, identity: 0.9

ttgagggattgtatgagcaaatccaatgat	CRISPR spacer
tcgagggattatgtgagcaaatccaatgat	Protospacer
*.********.*.*****************

98. spacer 5.8|1406695|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448943 (Streptococcus phage Javan450, complete genome) position: , mismatch: 3, identity: 0.9

ttgagggattgtatgagcaaatccaatgat	CRISPR spacer
tcgagggattatgtgagcaaatccaatgat	Protospacer
*.********.*.*****************

99. spacer 5.8|1406695|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448972 (Streptococcus phage Javan520, complete genome) position: , mismatch: 3, identity: 0.9

ttgagggattgtatgagcaaatccaatgat	CRISPR spacer
tcgagggattatgtgagcaaatccaatgat	Protospacer
*.********.*.*****************

100. spacer 5.8|1406695|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448786 (Streptococcus phage Javan509, complete genome) position: , mismatch: 3, identity: 0.9

ttgagggattgtatgagcaaatccaatgat	CRISPR spacer
tcgagggattatgtgagcaaatccaatgat	Protospacer
*.********.*.*****************

101. spacer 5.8|1406695|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448774 (Streptococcus phage Javan487, complete genome) position: , mismatch: 3, identity: 0.9

ttgagggattgtatgagcaaatccaatgat	CRISPR spacer
tcgagggattatgtgagcaaatccaatgat	Protospacer
*.********.*.*****************

102. spacer 5.8|1406695|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448778 (Streptococcus phage Javan493, complete genome) position: , mismatch: 3, identity: 0.9

ttgagggattgtatgagcaaatccaatgat	CRISPR spacer
tcgagggattatgtgagcaaatccaatgat	Protospacer
*.********.*.*****************

103. spacer 5.8|1406695|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448963 (Streptococcus phage Javan498, complete genome) position: , mismatch: 3, identity: 0.9

ttgagggattgtatgagcaaatccaatgat	CRISPR spacer
tcgagggattatgtgagcaaatccaatgat	Protospacer
*.********.*.*****************

104. spacer 5.8|1406695|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448773 (Streptococcus phage Javan485, complete genome) position: , mismatch: 3, identity: 0.9

ttgagggattgtatgagcaaatccaatgat	CRISPR spacer
tcgagggattatgtgagcaaatccaatgat	Protospacer
*.********.*.*****************

105. spacer 5.8|1406695|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448958 (Streptococcus phage Javan486, complete genome) position: , mismatch: 3, identity: 0.9

ttgagggattgtatgagcaaatccaatgat	CRISPR spacer
tcgagggattatgtgagcaaatccaatgat	Protospacer
*.********.*.*****************

106. spacer 5.8|1406695|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448777 (Streptococcus phage Javan491, complete genome) position: , mismatch: 3, identity: 0.9

ttgagggattgtatgagcaaatccaatgat	CRISPR spacer
tcgagggattatgtgagcaaatccaatgat	Protospacer
*.********.*.*****************

107. spacer 5.8|1406695|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448765 (Streptococcus phage Javan459, complete genome) position: , mismatch: 3, identity: 0.9

ttgagggattgtatgagcaaatccaatgat	CRISPR spacer
tcgagggattatgtgagcaaatccaatgat	Protospacer
*.********.*.*****************

108. spacer 5.4|1406431|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448848 (Streptococcus phage Javan126, complete genome) position: , mismatch: 4, identity: 0.867

ccgtaaacacgtcataggcttggtactgac	CRISPR spacer
tagtaaacacgtcataggcttgatactcac	Protospacer
. ********************.**** **

109. spacer 5.4|1406431|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448857 (Streptococcus phage Javan164, complete genome) position: , mismatch: 4, identity: 0.867

ccgtaaacacgtcataggcttggtactgac	CRISPR spacer
tagtaaacacgtcataggcttgatactcac	Protospacer
. ********************.**** **

110. spacer 5.4|1406431|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448677 (Streptococcus phage Javan133, complete genome) position: , mismatch: 4, identity: 0.867

ccgtaaacacgtcataggcttggtactgac	CRISPR spacer
tagtaaacacgtcataggcttgatactcac	Protospacer
. ********************.**** **

111. spacer 5.9|1406761|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448794 (Streptococcus phage Javan525, complete genome) position: , mismatch: 4, identity: 0.867

tgggctgccagcttaatctcagcttgcagg	CRISPR spacer
cgggctgacatcttaatctcagcttgcaag	Protospacer
.****** ** *****************.*

112. spacer 5.9|1406761|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448765 (Streptococcus phage Javan459, complete genome) position: , mismatch: 4, identity: 0.867

tgggctgccagcttaatctcagcttgcagg	CRISPR spacer
cgggctgacatcttaatctcagcttgcaag	Protospacer
.****** ** *****************.*

113. spacer 5.2|1406299|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MH791411 (UNVERIFIED: Escherichia phage Ecwhy_1, complete genome) position: , mismatch: 5, identity: 0.833

tatcaacaggtgtttcttcaataaccttta	CRISPR spacer
tgtcaacaggtttttcttcaataagcataa	Protospacer
*.********* ************ * * *

114. spacer 5.2|1406299|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MH494197 (Escherichia phage CMSTMSU, complete genome) position: , mismatch: 5, identity: 0.833

tatcaacaggtgtttcttcaataaccttta	CRISPR spacer
tgtcaacaggtttttcttcaataagcataa	Protospacer
*.********* ************ * * *

115. spacer 5.3|1406365|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MT767754 (Microcystis phage vB_MweS-yong1, complete genome) position: , mismatch: 5, identity: 0.833

atattgataatttacaaactatttttgata-	CRISPR spacer
atattgataatttaaaaatta-ttctaatac	Protospacer
************** ***.** **.*.***

116. spacer 5.3|1406365|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK496795 (Capybara microvirus Cap3_SP_446, complete genome) position: , mismatch: 6, identity: 0.8

atattgataatttacaaactatttttgata	CRISPR spacer
atattgagaatttaaaaactattcatcaga	Protospacer
******* ****** ********. * * *

117. spacer 5.11|1406893|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP019409 (Enterococcus faecium strain SMVRE20 plasmid pSMVRE20L, complete sequence) position: , mismatch: 6, identity: 0.8

ctggtggcaggtaaagtgtgttgttttttg	CRISPR spacer
ttgtaggctggtaaagtttgttgtttttta	Protospacer
.**  *** ******** ***********.

118. spacer 5.16|1407223|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP044456 (Acinetobacter indicus strain B18 plasmid pB18-1, complete sequence) position: , mismatch: 6, identity: 0.8

tcttaatgcgtatgaaaagcagattattga	CRISPR spacer
tcgtttggcgaatgaaaagcagattgttga	Protospacer
** *   *** **************.****

119. spacer 5.16|1407223|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039144 (Acinetobacter sp. 10FS3-1 plasmid p10FS3-1-1, complete sequence) position: , mismatch: 6, identity: 0.8

tcttaatgcgtatgaaaagcagattattga	CRISPR spacer
tcgtttggcgaatgaaaagcagattgttga	Protospacer
** *   *** **************.****

120. spacer 5.2|1406299|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to NC_018855 (Enterobacteria phage HX01, complete genome) position: , mismatch: 7, identity: 0.767

tatcaacaggtgtttcttcaataaccttta	CRISPR spacer
catcaacacgtgtttcttccataacatgct	Protospacer
.******* ********** ***** * .

121. spacer 5.2|1406299|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to AY303349 (Enterobacteria phage RB69, complete genome) position: , mismatch: 7, identity: 0.767

tatcaacaggtgtttcttcaataaccttta	CRISPR spacer
catcaacacgtgtttcttccataacatgct	Protospacer
.******* ********** ***** * .

122. spacer 5.3|1406365|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP043858 (Arcobacter cibarius strain H743 plasmid pACIB, complete sequence) position: , mismatch: 7, identity: 0.767

atattgataatttacaaactatttttgata	CRISPR spacer
gtattgataatttacaaattaattttacag	Protospacer
.*****************.** ****.  .

123. spacer 5.3|1406365|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030151 (Bacillus velezensis strain DSYZ plasmid pDSYZ, complete sequence) position: , mismatch: 7, identity: 0.767

atattgataatttacaaactatttttgata	CRISPR spacer
tttcacataatttacaaacgagttttgata	Protospacer
 * .  ************* * ********

124. spacer 5.3|1406365|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026611 (Bacillus velezensis strain CGMCC 11640 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

atattgataatttacaaactatttttgata	CRISPR spacer
tttcacataatttacaaacgagttttgata	Protospacer
 * .  ************* * ********

125. spacer 5.3|1406365|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009967 (Bacillus cereus E33L plasmid pBCO_1, complete sequence) position: , mismatch: 7, identity: 0.767

atattgataatttacaaactatttttgata	CRISPR spacer
gtattgttaatatacaaactatttctaagt	Protospacer
.***** **** ************.*.*

126. spacer 5.3|1406365|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to NC_007103 (Bacillus cereus E33L plasmid pE33L466, complete sequence) position: , mismatch: 7, identity: 0.767

atattgataatttacaaactatttttgata	CRISPR spacer
gtattgttaatatacaaactatttctaagt	Protospacer
.***** **** ************.*.*

127. spacer 5.3|1406365|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to NC_018689 (Bacillus thuringiensis MC28 plasmid pMC429, complete sequence) position: , mismatch: 7, identity: 0.767

atattgataatttacaaactatttttgata	CRISPR spacer
gtattgttaatatacaaactatttctaagt	Protospacer
.***** **** ************.*.*

128. spacer 5.5|1406497|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448746 (Streptococcus phage Javan383, complete genome) position: , mismatch: 7, identity: 0.767

ttgagggattgtatgagcaaatccaatgat	CRISPR spacer
ttgagggattatatgagcacatcggaaaac	Protospacer
**********.******** *** .* .*.

129. spacer 5.5|1406497|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448753 (Streptococcus phage Javan407, complete genome) position: , mismatch: 7, identity: 0.767

ttgagggattgtatgagcaaatccaatgat	CRISPR spacer
ttgagggattatatgagcacatcggacaac	Protospacer
**********.******** *** .*..*.

130. spacer 5.8|1406695|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448746 (Streptococcus phage Javan383, complete genome) position: , mismatch: 7, identity: 0.767

ttgagggattgtatgagcaaatccaatgat	CRISPR spacer
ttgagggattatatgagcacatcggaaaac	Protospacer
**********.******** *** .* .*.

131. spacer 5.8|1406695|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MK448753 (Streptococcus phage Javan407, complete genome) position: , mismatch: 7, identity: 0.767

ttgagggattgtatgagcaaatccaatgat	CRISPR spacer
ttgagggattatatgagcacatcggacaac	Protospacer
**********.******** *** .*..*.

132. spacer 5.9|1406761|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017986 (Klebsiella pneumoniae strain 825795-1 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

tgggctgccagcttaatctcagcttgcagg	CRISPR spacer
ggtaatcccagcttaatctcaccttggagg	Protospacer
 * . * ************** **** ***

133. spacer 5.9|1406761|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018714 (Klebsiella pneumoniae strain Kp_Goe_152021 plasmid pKp_Goe_021-1, complete sequence) position: , mismatch: 7, identity: 0.767

tgggctgccagcttaatctcagcttgcagg	CRISPR spacer
ggtaatcccagcttaatctcaccttggagg	Protospacer
 * . * ************** **** ***

134. spacer 5.9|1406761|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031736 (Klebsiella pneumoniae subsp. pneumoniae strain Klebsiella pneumoniae plasmid pKPM502, complete sequence) position: , mismatch: 7, identity: 0.767

tgggctgccagcttaatctcagcttgcagg	CRISPR spacer
ggtaatcccagcttaatctcaccttggagg	Protospacer
 * . * ************** **** ***

135. spacer 5.9|1406761|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018313 (Klebsiella pneumoniae strain Kp_Goe_822579 plasmid pKp_Goe_579-1, complete sequence) position: , mismatch: 7, identity: 0.767

tgggctgccagcttaatctcagcttgcagg	CRISPR spacer
ggtaatcccagcttaatctcaccttggagg	Protospacer
 * . * ************** **** ***

136. spacer 5.9|1406761|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018687 (Klebsiella pneumoniae strain Kp_Goe_149473 plasmid pKp_Goe_473-1, complete sequence) position: , mismatch: 7, identity: 0.767

tgggctgccagcttaatctcagcttgcagg	CRISPR spacer
ggtaatcccagcttaatctcaccttggagg	Protospacer
 * . * ************** **** ***

137. spacer 5.9|1406761|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to JX316028 (Erwinia phage phiEaH2, complete genome) position: , mismatch: 7, identity: 0.767

tgggctgccagcttaatctcagcttgcagg	CRISPR spacer
aatgcgtccagcttaacctcaccttgcagg	Protospacer
 . **  *********.**** ********

138. spacer 5.9|1406761|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018720 (Klebsiella pneumoniae strain KP_Goe_828304 plasmid pKp_Goe_304-1, complete sequence) position: , mismatch: 7, identity: 0.767

tgggctgccagcttaatctcagcttgcagg	CRISPR spacer
ggtaatcccagcttaatctcaccttggagg	Protospacer
 * . * ************** **** ***

139. spacer 5.9|1406761|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018702 (Klebsiella pneumoniae strain Kp_Goe_827024 plasmid pKp_Goe_024-1, complete sequence) position: , mismatch: 7, identity: 0.767

tgggctgccagcttaatctcagcttgcagg	CRISPR spacer
ggtaatcccagcttaatctcaccttggagg	Protospacer
 * . * ************** **** ***

140. spacer 5.9|1406761|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034054 (Klebsiella pneumoniae strain KP_NORM_BLD_2015_112126 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

tgggctgccagcttaatctcagcttgcagg	CRISPR spacer
ggtaatcccagcttaatctcaccttggagg	Protospacer
 * . * ************** **** ***

141. spacer 5.9|1406761|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034046 (Klebsiella pneumoniae strain KP_NORM_BLD_2014_104014 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

tgggctgccagcttaatctcagcttgcagg	CRISPR spacer
ggtaatcccagcttaatctcaccttggagg	Protospacer
 * . * ************** **** ***

142. spacer 5.9|1406761|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018696 (Klebsiella pneumoniae strain Kp_Goe_149832 plasmid pKp_Goe_832-1, complete sequence) position: , mismatch: 7, identity: 0.767

tgggctgccagcttaatctcagcttgcagg	CRISPR spacer
ggtaatcccagcttaatctcaccttggagg	Protospacer
 * . * ************** **** ***

143. spacer 5.9|1406761|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018708 (Klebsiella pneumoniae strain Kp_Goe_827026 plasmid pKp_Goe_026-1, complete sequence) position: , mismatch: 7, identity: 0.767

tgggctgccagcttaatctcagcttgcagg	CRISPR spacer
ggtaatcccagcttaatctcaccttggagg	Protospacer
 * . * ************** **** ***

144. spacer 5.10|1406827|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053207 (Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1C, complete sequence) position: , mismatch: 7, identity: 0.767

tcgcctgtgtgccaaaaccagcgccgacta	CRISPR spacer
gccgctttgtgccaaaacccgcgccgacag	Protospacer
 *  ** ************ ******** .

145. spacer 5.11|1406893|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to NC_016851 (Aliivibrio fischeri strain KB1A-97 plasmid pKB1A97-67, complete sequence) position: , mismatch: 7, identity: 0.767

ctggtggcaggtaaagtgtgttgttttttg	CRISPR spacer
gtgcaggcagtcaaagtgtgttgtttttaa	Protospacer
 **  ***** .**************** .

146. spacer 5.15|1407157|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MN693843 (Marine virus AFVG_250M254, complete genome) position: , mismatch: 7, identity: 0.767

taacaaacaaggaacgtttaacacaaataa	CRISPR spacer
aaacaaacaaggcacgtttaatactacgag	Protospacer
 *********** ********.** *  *.

147. spacer 5.2|1406299|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to NC_021854 (Lactococcus phage jm3, complete genome) position: , mismatch: 8, identity: 0.733

tatcaacaggtgtttcttcaataaccttta	CRISPR spacer
tttcaacaggtgtttcatcaatatttgctc	Protospacer
* ************** ****** .. .*

148. spacer 5.2|1406299|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MH359124 (Escherichia phage SF, complete genome) position: , mismatch: 8, identity: 0.733

tatcaacaggtgtttcttcaataaccttta	CRISPR spacer
cgtcaacacgtgtttcttccataacatgct	Protospacer
..****** ********** ***** * .

149. spacer 5.6|1406563|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009119 (Borreliella valaisiana Tom4006 plasmid lp54, complete sequence) position: , mismatch: 8, identity: 0.733

tataaattgcagcagttagcatttttaaat	CRISPR spacer
actttcttgcaccagttagcattattaaag	Protospacer
  *   ***** *********** *****

150. spacer 5.7|1406629|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MN693615 (Marine virus AFVG_250M1187, complete genome) position: , mismatch: 8, identity: 0.733

ttaccatcatctttccactgtctgatagct	CRISPR spacer
gtcccatcatcttcccactctctgatccag	Protospacer
 * **********.***** ******

151. spacer 5.7|1406629|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MN693624 (Marine virus AFVG_250M402, complete genome) position: , mismatch: 8, identity: 0.733

ttaccatcatctttccactgtctgatagct	CRISPR spacer
gtcccatcatcttcccactctctgatccaa	Protospacer
 * **********.***** ******

152. spacer 5.7|1406629|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MN693914 (Marine virus AFVG_250M396, complete genome) position: , mismatch: 8, identity: 0.733

ttaccatcatctttccactgtctgatagct	CRISPR spacer
gtcccatcatcttcccactctctgatccaa	Protospacer
 * **********.***** ******

153. spacer 5.14|1407091|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to FJ870915 (Sulfolobus spindle-shaped virus 6, complete genome) position: , mismatch: 8, identity: 0.733

gagataagtagcagtatacaagatgattta	CRISPR spacer
accagcagtagtagtatacaagatgatgaa	Protospacer
.  *  *****.***************  *

154. spacer 5.17|1407289|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to MN871447 (UNVERIFIED: Serratia phage KpLz_1_41, complete genome) position: , mismatch: 8, identity: 0.733

aactctttaatggattcagcgacaggttta	CRISPR spacer
aactctttaatgtatttagcgaccaccgca	Protospacer
************ ***.****** . . .*

155. spacer 5.2|1406299|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014199 (Escherichia coli strain MRE600 plasmid pMRE600-1, complete sequence) position: , mismatch: 9, identity: 0.7

tatcaacaggtgtttcttcaataaccttta	CRISPR spacer
ttgttttctgtgtttattcaataaccttta	Protospacer
*  .  .  ****** **************

156. spacer 5.2|1406299|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP042885 (Escherichia coli O10:H32 strain NMBU-W12E19 plasmid pNMBU-W12E19_01, complete sequence) position: , mismatch: 9, identity: 0.7

tatcaacaggtgtttcttcaataaccttta	CRISPR spacer
ttgttttctgtgtttattcaataaccttta	Protospacer
*  .  .  ****** **************

157. spacer 5.13|1407025|30|NZ_LS483354|CRISPRCasFinder,CRT,PILER-CR matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 9, identity: 0.7

taatgtagagttagcttatttcgacaatga	CRISPR spacer
atcggtaaagttagcttatttcaacaaact	Protospacer
    ***.**************.****

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

31849 : 42025

Synechococcus_phage(33.33%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012514704.1\|31849_35590_+	phosphoribosylformylglycinamidine synthase	A6N228	Microbacterium_phage	2.5e-38	25.5
WP_012514705.1\|35708_37166_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	5.2e-56	33.8
WP_012514706.1\|37222_38245_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A0E3FGG1	Synechococcus_phage	5.1e-58	44.5
WP_012514707.1\|38241_38799_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	3.4e-24	37.6
WP_021320236.1\|38945_40493_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	1.2e-71	47.3
WP_012514709.1\|40870_42025_-	SH3 domain-containing protein	A0A2H4IZY5	uncultured_Caudovirales_phage	1.6e-07	30.2

DBSCAN-SWA_2

544070 : 593910

Streptococcus_phage(41.67%)

tRNA,protease,transposase,bacteriocin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012515134.1\|544070_544982_+\|tRNA	glycine--tRNA ligase subunit alpha	NA	NA	NA	NA
WP_041785317.1\|545351_547391_+\|tRNA	glycine--tRNA ligase subunit beta	NA	NA	NA	NA
WP_012515137.1\|547928_548186_+	DUF896 family protein	NA	NA	NA	NA
WP_012515138.1\|548714_548876_+\|bacteriocin	streptolysin S family bacteriocin	NA	NA	NA	NA
WP_012515139.1\|549103_550054_+	SagB family peptide dehydrogenase	NA	NA	NA	NA
WP_012515140.1\|550050_551115_+	streptolysin associated protein SagC	NA	NA	NA	NA
WP_012515141.1\|551127_552486_+	YcaO-like family protein	NA	NA	NA	NA
WP_041785320.1\|552460_553132_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_012515143.1\|553128_553815_+	hypothetical protein	NA	NA	NA	NA
WP_012515144.1\|553837_554761_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	3.0e-25	32.1
WP_012515145.1\|554769_555897_+	ABC transporter permease	NA	NA	NA	NA
WP_012515146.1\|555893_557012_+	ABC transporter permease	NA	NA	NA	NA
WP_111721644.1\|557144_558503_-	thioester-forming surface-anchored protein	NA	NA	NA	NA
WP_012515148.1\|558817_560386_-	thioester-forming surface-anchored protein	NA	NA	NA	NA
WP_012515151.1\|560800_561886_-	hypothetical protein	NA	NA	NA	NA
WP_012515153.1\|562357_562987_-	copper homeostasis protein CutC	NA	NA	NA	NA
WP_012515154.1\|563197_563752_+	GNAT family N-acetyltransferase	M1PSC3	Streptococcus_phage	9.5e-51	63.2
WP_079993910.1\|564238_565357_+\|transposase	ISAs1-like element ISSeq10 family transposase	NA	NA	NA	NA
WP_021320457.1\|565485_565998_+	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	4.8e-41	53.2
WP_012515157.1\|566001_566355_+	arsenate reductase family protein	M1PLC0	Streptococcus_phage	2.9e-37	63.2
WP_012515158.1\|566430_567258_-	exodeoxyribonuclease III	M1PSC0	Streptococcus_phage	1.3e-125	77.7
WP_012515159.1\|567610_572515_+	S8 family serine peptidase	A0A1B0T6A2	Bacillus_phage	2.6e-06	33.3
WP_012515160.1\|572689_574369_+	hypothetical protein	NA	NA	NA	NA
WP_111721645.1\|574903_576160_+	MucBP domain-containing protein	NA	NA	NA	NA
WP_021320460.1\|576545_577244_+	DUF1275 domain-containing protein	NA	NA	NA	NA
WP_041785323.1\|577462_579466_+\|tRNA	methionine--tRNA ligase	A0A1V0SHR2	Klosneuvirus	4.3e-85	34.8
WP_012515165.1\|580023_580917_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_012515166.1\|581269_581410_+	hypothetical protein	NA	NA	NA	NA
WP_021320463.1\|581522_581681_+	hypothetical protein	NA	NA	NA	NA
WP_012515168.1\|581863_582031_+\|bacteriocin	class IIb bacteriocin, lactobin A/cerein 7B family	NA	NA	NA	NA
WP_012515169.1\|582257_584411_+	peptide cleavage/export ABC transporter	W8CYL7	Bacillus_phage	4.1e-41	27.0
WP_012515170.1\|584425_585793_+\|bacteriocin	bacteriocin secretion accessory protein	NA	NA	NA	NA
WP_024273149.1\|586301_586538_+	hypothetical protein	NA	NA	NA	NA
WP_012515172.1\|586992_588006_+	class 1b ribonucleoside-diphosphate reductase subunit beta	R4TBI6	Mycobacterium_phage	3.8e-98	52.4
WP_012515173.1\|588007_588418_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	R4JF54	Bacillus_phage	2.1e-10	37.3
WP_012515174.1\|588463_590638_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	A8E2R1	Enterococcus_phage	2.1e-170	44.7
WP_012515176.1\|591191_592535_+	branched-chain amino acid transport system II carrier protein	NA	NA	NA	NA
WP_041785325.1\|592653_593910_-\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	8.3e-127	56.1

DBSCAN-SWA_3

1141432 : 1215627

Bacillus_phage(26.09%)

tRNA,protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012515692.1\|1141432_1143526_+\|protease	ATP-dependent Clp protease ATP-binding subunit	H6X3M6	Enterobacteria_phage	5.8e-117	38.1
WP_012515693.1\|1143709_1146721_-	leucine-rich repeat domain-containing protein	NA	NA	NA	NA
WP_041785521.1\|1147082_1147682_-	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA
WP_012515695.1\|1147691_1148921_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	1.9e-139	61.8
WP_012515696.1\|1148956_1149127_-	hypothetical protein	NA	NA	NA	NA
WP_041785524.1\|1149146_1149644_-	dihydrofolate reductase	V9LZM6	Vibrio_phage	3.6e-17	30.9
WP_012515698.1\|1149724_1150564_-	thymidylate synthase	U5J9N5	Bacillus_phage	3.3e-79	51.4
WP_012515699.1\|1150748_1151924_+	hydroxymethylglutaryl-CoA synthase	NA	NA	NA	NA
WP_172453607.1\|1151910_1153194_+	hydroxymethylglutaryl-CoA reductase, degradative	NA	NA	NA	NA
WP_012515701.1\|1153477_1154470_-	type 2 isopentenyl-diphosphate Delta-isomerase	NA	NA	NA	NA
WP_021320818.1\|1154472_1155471_-	phosphomevalonate kinase	NA	NA	NA	NA
WP_012515703.1\|1155463_1156408_-	diphosphomevalonate decarboxylase	NA	NA	NA	NA
WP_012515704.1\|1156389_1157268_-	mevalonate kinase	NA	NA	NA	NA
WP_041785527.1\|1157798_1159550_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	2.0e-33	26.8
WP_111721696.1\|1159551_1161273_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	5.6e-41	28.1
WP_012515708.1\|1161722_1163729_+	5'-nucleotidase C-terminal domain-containing protein	NA	NA	NA	NA
WP_012515709.1\|1163921_1164332_-	peptide deformylase	NA	NA	NA	NA
WP_111721697.1\|1164463_1165813_-	NADP-specific glutamate dehydrogenase	NA	NA	NA	NA
WP_012515711.1\|1165953_1167726_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	2.1e-51	28.8
WP_012515712.1\|1167725_1169471_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	3.2e-36	23.9
WP_012515713.1\|1169575_1171444_-	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	2.8e-62	30.9
WP_041785882.1\|1171436_1172648_-\|tRNA	CCA tRNA nucleotidyltransferase	H7BUW3	unidentified_phage	1.6e-39	46.0
WP_012515715.1\|1172751_1173600_-	DegV family protein	NA	NA	NA	NA
WP_012677870.1\|1173599_1173980_-	DUF1149 family protein	NA	NA	NA	NA
WP_012515717.1\|1174202_1174913_-	glycoside hydrolase family 73 protein	A0A088F6W1	Sulfitobacter_phage	2.7e-05	36.2
WP_012514841.1\|1175344_1177066_+\|transposase	IS1634-like element ISSeq4 family transposase	NA	NA	NA	NA
WP_012515719.1\|1179325_1179532_-	hypothetical protein	NA	NA	NA	NA
WP_021320833.1\|1180003_1180396_-	hypothetical protein	NA	NA	NA	NA
WP_012515721.1\|1180385_1180595_-	helix-turn-helix transcriptional regulator	A0A139ZPI6	Marinitoga_camini_virus	6.3e-08	41.2
WP_012515722.1\|1181154_1181754_-	glycoside hydrolase family 73 protein	A0A249Y0X5	Enterococcus_phage	5.5e-12	34.5
WP_012515724.1\|1182341_1184288_-	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_012515725.1\|1184284_1185196_-	1-phosphofructokinase	NA	NA	NA	NA
WP_012515726.1\|1185192_1185906_-	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA
WP_012515727.1\|1186340_1187264_-	2-dehydropantoate 2-reductase	NA	NA	NA	NA
WP_012515728.1\|1187275_1188334_-	PTS transporter subunit IIC	NA	NA	NA	NA
WP_012515729.1\|1188465_1189458_-	NAD(P)/FAD-dependent oxidoreductase	Q9JRK7	Streptococcus_phage	6.9e-28	50.8
WP_012515730.1\|1189457_1190189_-\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_012515731.1\|1190178_1190697_-	ribosome maturation factor RimM	NA	NA	NA	NA
WP_165626751.1\|1191076_1192419_-\|transposase	IS3-like element ISSeq3 family transposase	A0A1B1P773	Bacillus_phage	1.3e-64	52.3
WP_111721698.1\|1192900_1196386_-	InlB B-repeat-containing protein	NA	NA	NA	NA
WP_012514856.1\|1196639_1197593_-\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	2.1e-37	36.4
WP_012515733.1\|1197661_1198318_-	recombinase family protein	M9Q1K0	Clostridium_phage	3.2e-13	28.9
WP_012515734.1\|1198484_1198724_-	KH domain-containing protein	NA	NA	NA	NA
WP_012677856.1\|1198733_1199006_-	30S ribosomal protein S16	NA	NA	NA	NA
WP_021320840.1\|1199448_1200066_-	TVP38/TMEM64 family protein	M1Q152	Streptococcus_phage	2.9e-40	47.9
WP_012515737.1\|1200058_1201282_-	ABC transporter permease	NA	NA	NA	NA
WP_012515738.1\|1201293_1202004_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.5e-35	41.7
WP_012515739.1\|1202003_1203266_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_041785531.1\|1203521_1206698_-	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA
WP_111721699.1\|1207116_1208208_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	R4TGJ8	Halovirus	4.7e-62	36.7
WP_012515742.1\|1208230_1209166_-	aspartate carbamoyltransferase catalytic subunit	A7RB08	Paramecium_bursaria_Chlorella_virus	4.0e-25	31.3
WP_012515743.1\|1209223_1210483_-	uracil transporter	Q9KX94	Enterobacteria_phage	1.0e-60	37.9
WP_012515744.1\|1210498_1211020_-	bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR	NA	NA	NA	NA
WP_041785885.1\|1211381_1211996_+	TVP38/TMEM64 family protein	M1Q152	Streptococcus_phage	2.1e-27	39.6
WP_037584196.1\|1212076_1212967_-	RluA family pseudouridine synthase	NA	NA	NA	NA
WP_041785534.1\|1212956_1213415_-	signal peptidase II	NA	NA	NA	NA
WP_012515749.1\|1213643_1214573_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_012677843.1\|1214979_1215273_-	50S ribosomal protein L27	NA	NA	NA	NA
WP_012515751.1\|1215294_1215627_-\|protease	ribosomal-processing cysteine protease Prp	NA	NA	NA	NA

DBSCAN-SWA_4

1541414 : 1647911

Bacillus_phage(13.64%)

tRNA,transposase,bacteriocin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012514856.1\|1541414_1542368_-\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	2.1e-37	36.4
WP_012516055.1\|1542562_1543360_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_012516056.1\|1543523_1543874_+	DUF3397 domain-containing protein	NA	NA	NA	NA
WP_012516057.1\|1544079_1546479_-	DNA translocase FtsK	S5VNE3	Mycobacterium_phage	5.5e-87	50.6
WP_012516058.1\|1546598_1546772_+	hypothetical protein	NA	NA	NA	NA
WP_012516059.1\|1546858_1547665_+	peptidylprolyl isomerase	A0A2H4UTF4	Bodo_saltans_virus	1.9e-20	36.6
WP_012516060.1\|1547820_1548654_-	metal ABC transporter permease	NA	NA	NA	NA
WP_012516061.1\|1548654_1549380_-	metal ABC transporter ATP-binding protein	A0A1V0SE00	Indivirus	1.5e-19	34.0
WP_012516062.1\|1549439_1550372_-	metal ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_012516063.1\|1550517_1551165_+	metal-dependent transcriptional regulator	NA	NA	NA	NA
WP_012516064.1\|1551214_1551916_-	5'-methylthioadenosine/adenosylhomocysteine nucleosidase	NA	NA	NA	NA
WP_012516065.1\|1551937_1552186_-	hypothetical protein	NA	NA	NA	NA
WP_012516066.1\|1552185_1552740_-	NUDIX hydrolase	NA	NA	NA	NA
WP_111721719.1\|1552770_1554153_-	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	A0A2K9L140	Tupanvirus	7.2e-31	36.9
WP_111721720.1\|1554496_1555471_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_012516070.1\|1555471_1555930_-	ASCH domain-containing protein	NA	NA	NA	NA
WP_012516071.1\|1556128_1556827_-	3-oxoacyl-ACP reductase	NA	NA	NA	NA
WP_012516072.1\|1556819_1557056_-	DUF2829 domain-containing protein	NA	NA	NA	NA
WP_012516073.1\|1557561_1558278_+	hypothetical protein	NA	NA	NA	NA
WP_012516074.1\|1558470_1559073_-	L,D-transpeptidase	NA	NA	NA	NA
WP_012516075.1\|1559164_1561816_-\|tRNA	valine--tRNA ligase	A0A1V0S951	Catovirus	1.3e-150	41.0
WP_012516076.1\|1561828_1562392_-	hypothetical protein	NA	NA	NA	NA
WP_012516077.1\|1562591_1563176_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_012516079.1\|1563435_1563936_-	hypothetical protein	NA	NA	NA	NA
WP_012516080.1\|1563957_1564212_-	DUF1912 family protein	NA	NA	NA	NA
WP_014623312.1\|1564921_1565092_-	hypothetical protein	NA	NA	NA	NA
WP_012516082.1\|1565528_1566284_+	3-deoxy-7-phosphoheptulonate synthase	NA	NA	NA	NA
WP_041785644.1\|1566342_1567425_+	3-dehydroquinate synthase	NA	NA	NA	NA
WP_012516087.1\|1569442_1570216_-	nucleoside phosphorylase	F5CA76	Streptococcus_phi-m46.1-like_phage	5.8e-22	39.6
WP_012516088.1\|1570341_1571226_-	shikimate dehydrogenase (NADP+)	NA	NA	NA	NA
WP_111721721.1\|1571376_1574820_-	glycoside hydrolase family 2 protein	NA	NA	NA	NA
WP_012516090.1\|1574833_1576318_-	response regulator transcription factor	NA	NA	NA	NA
WP_111721722.1\|1576317_1578042_-	sensor histidine kinase	NA	NA	NA	NA
WP_012516092.1\|1578031_1578637_-	DUF624 domain-containing protein	NA	NA	NA	NA
WP_041785652.1\|1578984_1580430_-	extracellular solute-binding protein	NA	NA	NA	NA
WP_012516095.1\|1580513_1581440_-	carbohydrate ABC transporter permease	NA	NA	NA	NA
WP_012516096.1\|1581449_1582400_-	sugar ABC transporter permease	NA	NA	NA	NA
WP_012516097.1\|1582611_1583505_+	ROK family protein	NA	NA	NA	NA
WP_111721723.1\|1583492_1585667_+	glycoside hydrolase family 92 protein	NA	NA	NA	NA
WP_012516099.1\|1585986_1587378_-	glycoside hydrolase family 1 protein	A0A0B5JD41	Pandoravirus	5.0e-40	27.0
WP_111721724.1\|1587404_1589099_-	beta-N-acetylglucosaminidase domain-containing protein	NA	NA	NA	NA
WP_012516101.1\|1589113_1590172_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_111721725.1\|1590305_1591592_+	glycoside hydrolase family 125 protein	NA	NA	NA	NA
WP_041785656.1\|1591606_1594333_+	alpha-mannosidase	NA	NA	NA	NA
WP_012516104.1\|1594516_1595125_-	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	2.5e-20	34.1
WP_012516105.1\|1595121_1597125_-	ABC transporter permease	NA	NA	NA	NA
WP_165626725.1\|1597173_1597320_-	hypothetical protein	NA	NA	NA	NA
WP_111692934.1\|1597824_1598028_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_041785661.1\|1598119_1598710_-	N-acetyltransferase	NA	NA	NA	NA
WP_012516108.1\|1598960_1599374_-	hypothetical protein	NA	NA	NA	NA
WP_012516109.1\|1600035_1600239_-\|bacteriocin	bacteriocin BlpN-like	NA	NA	NA	NA
WP_012516110.1\|1600255_1600510_-\|bacteriocin	ComC/BlpC family leader-containing pheromone/bacteriocin	NA	NA	NA	NA
WP_012516111.1\|1600663_1600960_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_021321057.1\|1600959_1601178_-\|bacteriocin	ComC/BlpC family leader-containing pheromone/bacteriocin	NA	NA	NA	NA
WP_111721726.1\|1601488_1602836_+\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	6.9e-63	49.3
WP_012516113.1\|1603221_1603518_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_012677516.1\|1603524_1603773_-\|bacteriocin	garvicin Q family class II bacteriocin	NA	NA	NA	NA
WP_012516115.1\|1604031_1606188_+	peptide cleavage/export ABC transporter	W8CYL7	Bacillus_phage	1.1e-41	27.4
WP_021321060.1\|1606198_1607557_+\|bacteriocin	bacteriocin secretion accessory protein	NA	NA	NA	NA
WP_012516117.1\|1607656_1607791_+\|bacteriocin	ComC/BlpC family leader-containing pheromone/bacteriocin	NA	NA	NA	NA
WP_012516118.1\|1607909_1609244_-	GHKL domain-containing protein	NA	NA	NA	NA
WP_012516119.1\|1609243_1609993_-	response regulator transcription factor	NA	NA	NA	NA
WP_012514856.1\|1610290_1611244_-\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	2.1e-37	36.4
WP_012516120.1\|1611712_1611916_-\|bacteriocin	TmhB bacteriocin enhancer peptide	NA	NA	NA	NA
WP_012516121.1\|1611932_1612190_-\|bacteriocin	ThmA bacteriocin	NA	NA	NA	NA
WP_111721727.1\|1612510_1613878_-	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	A0A2K5B251	Erysipelothrix_phage	4.1e-71	32.9
WP_012516123.1\|1613874_1614843_-	hypothetical protein	NA	NA	NA	NA
WP_165626751.1\|1615592_1616934_+\|transposase	IS3-like element ISSeq3 family transposase	A0A1B1P773	Bacillus_phage	1.3e-64	52.3
WP_041785926.1\|1617155_1617365_+	helix-turn-helix domain-containing protein	A0A2K5B263	Erysipelothrix_phage	1.5e-12	49.3
WP_041785665.1\|1617364_1619866_+	DNA cytosine methyltransferase	K7XRH7	uncultured_Mediterranean_phage	6.5e-06	26.8
WP_012516126.1\|1619882_1620389_+	hypothetical protein	NA	NA	NA	NA
WP_012516127.1\|1620385_1621639_+	fibronectin type III domain-containing protein	NA	NA	NA	NA
WP_012516128.1\|1621648_1622578_+	DUF1837 domain-containing protein	NA	NA	NA	NA
WP_012516129.1\|1622578_1624639_+	DEAD/DEAH box helicase	NA	NA	NA	NA
WP_012516130.1\|1624875_1625652_+	recombination regulator RecX	NA	NA	NA	NA
WP_012516131.1\|1625884_1626418_+	DUF402 domain-containing protein	NA	NA	NA	NA
WP_012516132.1\|1626667_1626979_+	DUF960 domain-containing protein	NA	NA	NA	NA
WP_043037243.1\|1627674_1628007_+	hypothetical protein	NA	NA	NA	NA
WP_012516134.1\|1634019_1634568_-	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
WP_041785669.1\|1634643_1635309_-	ComF family protein	NA	NA	NA	NA
WP_012516136.1\|1635283_1636606_-	DEAD/DEAH box helicase	A0A1X9I5S6	Streptococcus_phage	1.7e-122	52.3
WP_012516137.1\|1636661_1637303_+	YigZ family protein	A0A1X9I5T8	Streptococcus_phage	2.1e-62	57.9
WP_012516138.1\|1637424_1638351_+	cysteine synthase A	A0A1X9I5F1	Streptococcus_phage	8.5e-137	81.0
WP_012516140.1\|1638737_1639100_-	S1 RNA-binding domain-containing protein	NA	NA	NA	NA
WP_021321065.1\|1639099_1640500_-	Cof-type HAD-IIB family hydrolase	A0A1V0S9I2	Catovirus	1.3e-24	42.3
WP_041785672.1\|1640533_1641175_-	response regulator transcription factor	NA	NA	NA	NA
WP_012516143.1\|1641167_1642172_-	sensor histidine kinase	NA	NA	NA	NA
WP_012679994.1\|1642168_1642861_-	transporter	NA	NA	NA	NA
WP_012516145.1\|1642993_1644889_-	Stk1 family PASTA domain-containing Ser/Thr kinase	A0A1B1IUU3	uncultured_Mediterranean_phage	7.5e-23	36.3
WP_012516146.1\|1644885_1645626_-	Stp1/IreP family PP2C-type Ser/Thr phosphatase	NA	NA	NA	NA
WP_041785928.1\|1645663_1646986_-	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	NA	NA	NA	NA
WP_111721728.1\|1646975_1647911_-\|tRNA	methionyl-tRNA formyltransferase	E3SNR5	Prochlorococcus_phage	8.9e-09	37.8

DBSCAN-SWA_5

1954476 : 2015669

Streptococcus_phage(36.84%)

tRNA,protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012514856.1\|1954476_1955430_-\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	2.1e-37	36.4
WP_012516417.1\|1957180_1957576_-	single-stranded DNA-binding protein	A0A1S5SEC1	Streptococcus_phage	8.6e-22	54.7
WP_041785777.1\|1957686_1958400_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_012516419.1\|1958701_1959328_-\|tRNA	DUF4479 and tRNA-binding domain-containing protein	NA	NA	NA	NA
WP_012516420.1\|1959342_1959660_-	thioredoxin family protein	NA	NA	NA	NA
WP_012516421.1\|1959656_1960004_-	DUF4651 domain-containing protein	NA	NA	NA	NA
WP_111721745.1\|1960344_1961412_+	glutamyl aminopeptidase	NA	NA	NA	NA
WP_012516423.1\|1961495_1962269_+	pyrroline-5-carboxylate reductase	NA	NA	NA	NA
WP_012516424.1\|1962503_1962941_-	hypothetical protein	NA	NA	NA	NA
WP_012516425.1\|1962970_1963645_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_012516426.1\|1963654_1964107_-	hypothetical protein	NA	NA	NA	NA
WP_012516427.1\|1964108_1964312_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_012516428.1\|1964742_1965474_+	peroxide stress protein YaaA	A0A1X9I5I0	Streptococcus_phage	2.1e-37	40.3
WP_012516430.1\|1965934_1966549_-	anaerobic ribonucleoside-triphosphate reductase activating protein	A0A0C5K925	Enterococcus_phage	2.7e-54	56.6
WP_012516431.1\|1966558_1967053_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_012516432.1\|1967065_1968001_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_012516433.1\|1968028_1968175_-	hypothetical protein	NA	NA	NA	NA
WP_012516434.1\|1968280_1970479_-	anaerobic ribonucleoside-triphosphate reductase	A0A0C5KKX3	Enterococcus_phage	1.3e-279	65.2
WP_041785782.1\|1970574_1972134_-	membrane protein	NA	NA	NA	NA
WP_012516437.1\|1972685_1972985_-	DUF1292 domain-containing protein	NA	NA	NA	NA
WP_111721746.1\|1972994_1973414_-	Holliday junction resolvase RuvX	NA	NA	NA	NA
WP_012516439.1\|1973410_1973680_-	IreB family regulatory phosphoprotein	NA	NA	NA	NA
WP_012516440.1\|1973792_1974191_-	transcriptional regulator Spx	NA	NA	NA	NA
WP_165626751.1\|1976204_1977546_+\|transposase	IS3-like element ISSeq3 family transposase	A0A1B1P773	Bacillus_phage	1.3e-64	52.3
WP_012516441.1\|1977684_1978821_-	recombinase RecA	A0A0S2MVG1	Bacillus_phage	4.7e-121	65.2
WP_012516442.1\|1978914_1980186_-	competence/damage-inducible protein A	NA	NA	NA	NA
WP_012516443.1\|1980871_1981162_-	hypothetical protein	NA	NA	NA	NA
WP_012516444.1\|1981155_1981728_-	phosphlipase A2 SlaA	Q938J0	Temperate_phage	3.3e-75	70.3
WP_012516445.1\|1982013_1982967_+\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	2.7e-37	36.4
WP_012516446.1\|1983110_1983956_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_012516447.1\|1984400_1984952_-	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA
WP_012516448.1\|1984961_1985558_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA
WP_041785787.1\|1985559_1986783_-	MFS transporter	NA	NA	NA	NA
WP_012516450.1\|1986793_1988776_-	DNA mismatch repair endonuclease MutL	A0A1B2LRQ5	Wolbachia_phage	3.7e-65	31.7
WP_041785790.1\|1988922_1991463_-	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	1.9e-37	22.5
WP_012516452.1\|1991449_1991800_-	YlbF family regulator	NA	NA	NA	NA
WP_012516453.1\|1991801_1992239_-	arginine repressor	NA	NA	NA	NA
WP_012678698.1\|1992521_1994213_+\|tRNA	arginine--tRNA ligase	A0A2I2L3K1	Orpheovirus	3.8e-74	32.4
WP_012516454.1\|1994260_1995655_-	ABC-F family ATP-binding cassette domain-containing protein	A0A1B0RXA0	Streptococcus_phage	1.0e-40	26.3
WP_012516455.1\|1995826_1996741_-	YitT family protein	M1Q1P6	Streptococcus_phage	3.0e-54	39.7
WP_012516456.1\|1996884_1997766_-	YitT family protein	M1Q1P6	Streptococcus_phage	1.6e-44	34.2
WP_012516457.1\|1997781_1998729_-	YitT family protein	NA	NA	NA	NA
WP_012516458.1\|1998721_2000470_-\|tRNA	aspartate--tRNA ligase	A0A1V0SJ84	Klosneuvirus	7.7e-14	25.7
WP_012516459.1\|2000697_2001978_-\|tRNA	histidine--tRNA ligase	NA	NA	NA	NA
WP_012516460.1\|2002386_2002569_+	50S ribosomal protein L32	NA	NA	NA	NA
WP_001265622.1\|2002584_2002734_+	50S ribosomal protein L33	NA	NA	NA	NA
WP_041785325.1\|2002901_2004158_-\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	8.3e-127	56.1
WP_012516461.1\|2004450_2005308_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_111721747.1\|2005349_2006546_-	MFS transporter	NA	NA	NA	NA
WP_012516463.1\|2006526_2007537_-	hypothetical protein	NA	NA	NA	NA
WP_012516464.1\|2007526_2008591_-	ThiF family adenylyltransferase	A0A1V0SAV8	Catovirus	4.9e-11	34.5
WP_012516465.1\|2009056_2010937_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_012516467.1\|2012945_2013545_+	response regulator transcription factor	NA	NA	NA	NA
WP_041785325.1\|2014412_2015669_-\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	8.3e-127	56.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_LS483354

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CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

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Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection