CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_LT962688	Methylorubrum extorquens strain TK 0001 chromosome TK0001	4 crisprs	csa3,cas3,WYL,DEDDh	0	4	7	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_LT962688_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LT962688_1

461520-461611

Orphan

Consensus_repeat	Method
GCCTCATCGAACTGGTCGAAGAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LT962688_1

>merge|NZ_LT962688|1|461520-461611|CRISPRCasFinder
GCCTCATCGAACTGGTCGAAGACATTGCCGCCGGACGGCGCCGCGCCGGAGGCTTTCGGCGCGGCCGGCGCTTCATCGAACTGGTCGAAGAC

>NZ_LT962688|1|1|461520-461611|CRISPRCasFinder
GCCTCATCGAACTGGTCGAAGAC	ATTGCCGCCGGACGGCGCCGCGCCGGAGGCTTTCGGCGCGGCCGGC
GCTTCATCGAACTGGTCGAAGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LT962688.1\|WP_101475341.1\|451071_451488_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LT962688.1\|WP_157937210.1\|472637_474779_-\|VCBS-repeat-containing-protein	unknown	unknown	gnl\|CDD\|379232
NZ_LT962688.1\|WP_056505906.1\|450710_451067_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LT962688.1\|WP_101475343.1\|452601_452958_-\|septal-ring-lytic-transglycosylase-RlpA-family-protein	unknown	unknown	gnl\|CDD\|223868
NZ_LT962688.1\|WP_101475355.1\|467529_468078_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LT962688.1\|WP_056505901.1\|451484_451751_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LT962688.1\|WP_101475351.1\|463723_464443_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LT962688.1\|WP_101475346.1\|456016_456376_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LT962688.1\|WP_157937208.1\|456780_458007_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LT962688.1\|WP_101475352.1\|464570_465992_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LT962688.1\|WP_101475345.1\|454469_456005_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LT962688.1\|WP_101475354.1\|467007_467526_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LT962688.1\|WP_162302479.1\|453180_454461_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366285
NZ_LT962688.1\|WP_101475347.1\|456388_456775_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LT962688.1\|WP_056505857.1\|468081_468534_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LT962688.1\|WP_101475356.1\|468535_469132_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224170
NZ_LT962688.1\|WP_157937209.1\|465996_466770_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LT962688.1\|WP_101475342.1\|451753_452587_-\|N-acetylmuramidase-family-protein	unknown	unknown	gnl\|CDD\|378741
NZ_LT962688.1\|WP_101475358.1\|471569_472516_-\|IS630-family-transposase	unknown	unknown	gnl\|CDD\|315923
NZ_LT962688.1\|WP_101475350.1\|461625_463719_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|381598

Protein	Function_ID	Function_description	E-value
NZ_LT962688.1\|WP_157937210.1\|472637_474779_-\|VCBS-repeat-containing-protein	gnl\|CDD\|379232	pfam13517, VCBS, Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella. This domain of about 100 residues is found in multiple (up to 35) copies in long proteins from several species of Vibrio, Colwellia, Bradyrhizobium, and Shewanella (hence the name VCBS) and in smaller copy numbers in proteins from several other bacteria. The large protein size and repeat copy numbers, species distribution, and suggested activities of several member proteins suggests a role for this domain in adhesion (TIGR).	0.000522864
NZ_LT962688.1\|WP_101475343.1\|452601_452958_-\|septal-ring-lytic-transglycosylase-RlpA-family-protein	gnl\|CDD\|223868	COG0797, RlpA, Lipoproteins [Cell envelope biogenesis, outer membrane].	1.79074e-30
NZ_LT962688.1\|WP_101475350.1\|461625_463719_-\|hypothetical-protein	gnl\|CDD\|381598	cd00736, lambda_lys-like, Bacteriophage lambda lysozyme and similar proteins. Lysozyme from bacteriophage lambda hydrolyzes the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetylglucosamine (GlcNAc), as do other lysozymes. However, unlike other lysozymes, bacteriophage lambda does not produce a reducing end upon cleavage of the peptidoglycan, but rather uses the 6-OH of the same MurNAc residue to produce a 1,6-anhydromuramic acid terminal residue and is therefore a lytic transglycosylase. An identical 1,6-anhydro bond is formed in bacterial peptidoglycans by the action of the lytic transglycosylases of E. coli, though they differ structurally.	0.000308245
NZ_LT962688.1\|WP_101475356.1\|468535_469132_-\|hypothetical-protein	gnl\|CDD\|224170	COG1250, FadB, 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism].	0.00168451
NZ_LT962688.1\|WP_101475358.1\|471569_472516_-\|IS630-family-transposase	gnl\|CDD\|315923	pfam13358, DDE_3, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	8.24501e-48
NZ_LT962688.1\|WP_162302479.1\|453180_454461_+\|hypothetical-protein	gnl\|CDD\|366285	pfam00754, F5_F8_type_C, F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.	4.9815e-17
NZ_LT962688.1\|WP_101475342.1\|451753_452587_-\|N-acetylmuramidase-family-protein	gnl\|CDD\|378741	pfam11860, Muraidase, N-acetylmuramidase. Endolysins are bacteriophage encoded proteins synthesized at the end of the lytic infection cycle. They degrade the peptidoglycan (PG) of the host bacterium to allow viral progeny release. This domain family is found in bacteria and viruses. It is also found associated with pfam01471. One of the family members is the modular Gp110 endolysin found in the Salmonella phage. This domain represents the catalytic region found in the C-terminal of Gp110. It has been demonstrated to have N-acetylmuramidase (lysozyme) activity cleaving the beta-(1,4) glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues in the sugar backbone of the PG. Furthermore, sequence alignments containing this domain show that the Gp110 E101 residue is conserved (suggesting that is is the catalytic residue), and followed by serine (a common feature in lysozymes). The structure of endolysins varies depending on their origin. In general, most of the endolysins from phages infecting Gram-positive bacteria have a modular structure consisting of one or two N-terminal enzymatic active domains (EADs) and a C-terminal cell wall binding domain (CBD) separated by a short linker. In silico analysis indicate that this endolysin has a modular structure harboring this EAD family at the C-terminus and a PG_binding_1 CBD at the N-terminus.	1.63634e-62

>NZ_LT962688.1|WP_157937208.1|456780_458007_-|hypothetical-protein
MHRSFAAGLALALGLISAASAAESWPKSRQQILDASGRPLLVPSVAFFAAGTTTPLAVYSDPALTKPLAQPVKADGTGRFPRIYLPSALYAEQVTGPYGNLLWFDDGLGYVPPTAGGGGGGGTVDPTAIAATGDVKWRMDAGIMPGWVRMNGRTLGGAGSGATELASASAAAAFAYLWNTFPDTVASVVGGRGTSASSDFSAGKQIVIPTMQGLLQGGLDDMGSSPAGRVQTITDMTLSAGSTTATVFSSARLIVGMVVTATGISAGTTIADINGTTITLSQPAAAGSTGTVSGARFSVLGDAQMPGAIGGDAFSGLANKNLPAALPGGSVTVDYPAHSYITHETLAAASLSASTGAVTVPNLQQGLSNANTAPPNAKVFGFDITNPGGGLSFSNLPPTRLGTFYLKL
>NZ_LT962688.1|WP_101475347.1|456388_456775_-|hypothetical-protein
MPSFMNTLGAVSRRGQWRFRHVFRAADARGRLDPTDEGLIDFSTCSEVALEVTPRAPHRGCWSRQDPAPVLAASLASGTLVVSNPGIVEAVFPAGSLTDLRPGIYDTRVLVTIGPETEEVFCEPVEFA
>NZ_LT962688.1|WP_101475346.1|456016_456376_-|hypothetical-protein
MPSYPIRPTFPIDVRSPSGSVRVGRQGTAVTLDVVGGGGTDGQVTAGQFFAALEALRPGASAIVQDAVPSDPGDAVNRAYRTTAFITPDCALLAFVRDTLNLNVVQISDLLTAAALQPK
>NZ_LT962688.1|WP_101475345.1|454469_456005_-|hypothetical-protein
MLRSLRFGLIALATLASSSVFAPVSAQTFTLPEIGLQASGACPQLAMRERTGKTMVPLGCLDGTAKVIRWSGDGSGISLTPSASAASGTLARLIAERAPLASPAFTGSVVNAVPTACPTTAGNWTGNGLATWVPTCFGAFMSADKSGITIYPTRGTPSSNGLYPPNPEAGTPTTTNNNTANLLVQTKADGSMPKQTSSGFFNIDVVGGTVSAAHPSDAESPNATGLMITSQQRPGPAGQSPPAFWSINTDHVIAPGSGNTKSFGMELDLSNFNADCKVGENCTSAWFFYGGINAFPNLAVHYMANPHTQSYSGTATVSGATLTKSSGTFSQLITRMSYGGQTFRVDCTTTTCTADYPIGNSATPLEFKGYSAMAHTGLFFQDSADGTYIQDHDFYMGDSARSILTAAGKHRIGLDFTQDALPFAALFKGGQQVCYNGAAMCMSYSGGPNAWLFAPGTDPGAHVARIGATGDATFNGIVSANSFSANNAIGVSCSGPPTQNFQTVNGIVTRC
>NZ_LT962688.1|WP_162302479.1|453180_454461_+|hypothetical-protein
MFHRSIGFDHVFLYCNDEDPRELYEAVLPFTQGDRPFVTFRHFGILGQQGQMYTHFLRNFKHLSRNYIFLDVDEFILLRNDDTIREFISRFPGGVGAIHLFSVNAGHNGHATRPSGSAIRNYTRRSELPAPFTKCLVRSDAVDDNKIASAVGSGFWHHADCILKDGMFTLDSRGVSMRGYYLNIEENFPERLADPTFAKGVLDTGFIYHIGIKSLADFARRVERGAVGDFFVQEAWTEYHQRGPDFLEEFLRPSNVVEELRLVEMADATLARAFAHQIAAPPIGTNIALGKPATQSSISPWSRFQDLAQDAAGAVSGKPRGLWSHHTDYEEAPWWQVDLGAVIAIREVRIFNRVDAVRSRLRDFKILGSEDGETWTLLHAKDDGTEFGGVDGQMHIWAPPNPAQTRYVRVVRIGAGVLDLDQVEVY
>NZ_LT962688.1|WP_101475343.1|452601_452958_-|septal-ring-lytic-transglycosylase-RlpA-family-protein
MLLQRLAVRAALACLVLSVTPARATWTGTASFYGHESGSRRADGKRFVPEALGAAHWTLPLGTSVRVTDLSTGRHVDVRVNDRGPHPRLGRLIDLSLGAARALGITHRGLARVRVSLL
>NZ_LT962688.1|WP_101475342.1|451753_452587_-|N-acetylmuramidase-family-protein
MTSSTDAGAFARLRAAGFVCAALRLSDYDLPRIGHTIGVGEDEIHAVMEVEASGGGFDRLKRPKMLFEPHVFWRNLSGAARTRAASLGLAYAAWKPGAYPSDSYPRLAQALAIDETAALKAASWGLGQILGENFKAAGYATPQAMVLAFCNGGEAEHLAAMVRFIVTNGLDDELRRHDWAGFAKGYNGASYAKHGYHTKLAAAFAKWSKIKDTPWSPGMGEPAPDPLAPMTAPPPSPAPQPAPTGGLVRSGVQATGGAVRLGLTGLYDLIHTAFRKG
>NZ_LT962688.1|WP_056505901.1|451484_451751_-|hypothetical-protein
MAPRPFLARARLGLRRCWRAASGKRVYLLAGVMALPDVLDALPGVDLTPLLPEWLPGAKVATFLAVARLAARAYATKLATLPAREPPR
>NZ_LT962688.1|WP_101475341.1|451071_451488_-|hypothetical-protein
MSLLGWLSNPIGSALGAVGSGLIKVFGNSVLQPILKGMENGQNTQRDVAVQVVQAEMAANQAKAAIAPAFKGLIYGIGIPPAIHFGAACLTKTFDLGWNVQPLPPEYVPIEATILTAFFISSPLTTLARAGAARLLKA
>NZ_LT962688.1|WP_056505906.1|450710_451067_-|hypothetical-protein
MDTSFLSPGPITWAQIVALAAFLFALGKGADWVIGKLRAGTKDAVSPLTIDMAAVKIQIAAQNEALHNFKVEVARTYVTGDVITRMERRIDDLVTSMREEMAATRREMLQAITGRRAD
>NZ_LT962688.1|WP_101475350.1|461625_463719_-|hypothetical-protein
MNGATVFQMVSGLGDAFGSGYSDARKQAQEDEAPTLISNLMNAYKGGGAAPVPASGLGAPMAAPAASGPVAAAPTFAATGGSMGDYLASTRAKESGGNDAAANPNSTALGRYQFTKGTWAGLAKQYPDLGLTPNGRTDPAQQERAMQAFTRDNAQALTAAGIPINPTNLYGAHFLGAGGATKFIPGALNSPDAPAASLVGPGVASANRTVFFNRDGSPKTAGEVYAWMGGRRGGGSASTQTQVAAAPQIAPPQRSSVAVADNEADVQAMEREMGMLPSASRHVASAEPDAANLPAAGAQPVGFVVPQGGVPAAAPSQAFGGFPGGTTTRMTPELQTALNAAWRNPNTRAMAGEIFGQLLKGGDKSWDIKEINGQSAWVNTRDGRILPIGQAKRNTATVGNNLVDTATGEVLYSAAEKPTTVSPGSALVGPGGQVIYQAPDRESAKPVTVAAGASLVSPDGKPLFTAPDRDKTVENERKGREEAQSIRREIQGLASFKNYEQALPIYGAMVEAAPRNTKAADLNLVYGLGKIMDPGSVVREGEMVMVKNTGSLPDWLVGSINSLNGGQALTPETRNAIMTEAFGRMQAYEGALGQETARYRDIVSRAGINPEDVLPRFSTVKPYEMPKKSGSAPAPKADPAAKAAPTGPVSIPMAAVRFLRSNPANRDQFDAKYGPGASARILGPARENGPDSILAGP
>NZ_LT962688.1|WP_101475351.1|463723_464443_-|hypothetical-protein
MASIFSGKAGRQAAIWGAQQLQQGETEAKDALDQGLGFAKEQYGKASGLFGNLADEYRGGSKLYQDALGVNGADASNAARSAYTTGTGYTFNMDQGLQALARARAVNGTLASGNADTDAMKFASGLASQDFNNWLSNLSNLDTKRYGAVSGQAGAETGLGNIGYQTGAAKAAISTDTAKGLSTVGQQGLMAGQQAAENRFGALMGGANLLAKGVGALAGNPAALSNVGSNLSSAFSIFG
>NZ_LT962688.1|WP_101475352.1|464570_465992_-|hypothetical-protein
MPAIAWPLSSRPGLSDAEGAGRLINGFAEKLGDGARAPVSVRRAPGLSRFVDVGVSGPRGSRQVGPVVLAAYQNTLVRISEDRTVAALGPLPGSERITIARNNRQPNPDAVGVTELGAYRLPQDAAPQPLQTPSGLPAPNSVCELFGILFFTAGNGDCYATEPNQLTFNTLSKTTEQSRPGGLLRGIAFRDELFLFGPSGIGVYGGQSQANGFPLARVTGIPRGLIGPWAVAGQEEGWSNELIWVGDDSVVYQLSGYSPTRISNHDVERDLAAAAKVDPKAIEASVHLVAGHAFWAVSMPGRTWVYDLTTQQWHERASHQSSRWRASQSVKAFGRWLYGDTAGTGLLEVTESAFGEDGDPLRFRVESLPAQGFPARLAIPRADFDFALGVGGLSADPTISDPRALISWSDDGGRTWSNPLSRALGRQGESRTRINLLRTGMTGPQGRIWRVDVSDPVYCALLGGAMAVEARTE
>NZ_LT962688.1|WP_157937209.1|465996_466770_-|hypothetical-protein
MAANLCPNGDMEDVAGGLPVGWSLLNAVGAGSSISAFTDASYAGTTSLLLSKATATTSSAVAALGPRMDVTPLALHGLGFYVAPMAGTTTSGFTVQAFWYDRTDTYVTASNLLDNGPIAGAWNEISLPATPPAGCTYGRLAFILAEASTAQYVGIDAVLFRPALGALGIRDAAITPTKLYAPTRGQFFRALENSAAGRVATVTDAVPSDRGDAINIAFAHAQFVTQSGVLAQFVKTTLGLTDAQLAAIIAAARSVTE
>NZ_LT962688.1|WP_101475354.1|467007_467526_-|hypothetical-protein
MPAPYFLQRLGAGFKQVVATTIGGAGNADKIVATGAGGLLDISLFPAGIGADIFVVPATEALAAGAQVNLWASGGVLSARNADAVAASGGKRSDGFVLGAVASGASATVYRSGGPNTSLSGLTPGADYYLGTGGQVTATQNVTAAQTDQYIGKATSATVLDQVAPQPFVVNA
>NZ_LT962688.1|WP_101475355.1|467529_468078_-|hypothetical-protein
MARTLQEETRPRLARSFRAGYRPPLSGPDALLEGEALIVVPDNVMCFGLLGGGAFAEFDLSGGGSGPAPVLSAPATVAISGHTVVRAIEGGLAIASSSDMGQFGAAVGVSTGFAESGAPCAYVANGPLVEPSWSWAPGPVFLGADGALTQQEPASGFLQQIGVSDLPTRLLVDIQPPFALGA
>NZ_LT962688.1|WP_056505857.1|468081_468534_-|hypothetical-protein
MRTREDLIARVLKNLGVLAAGQAPSDEDRAEVDDLIEPVCEKLFHDGVAKLNGDEIDDAAYLPLADIVAERAMVPFGIGGTRAGEIRAAAEQARTDLKLAYRVYDARPPMRLEQFWGRRGGSAPINSRGRPITPPEDIDLDVTVDGGRRG
>NZ_LT962688.1|WP_101475356.1|468535_469132_-|hypothetical-protein
MWGPSSFWGHARPVTSDEAFMDTIETIATWGYKPDGSAQIFDLAPGADLPEGWHASPSVISDQSLATADALTMRATGLTFAHPVEVPASEPSAVDELLTALTEIDRLKGVIEAGMAENAALVADIDAAEKTLEGASAAMSDLRESLAKAHEDGRVNAAERDAAKAAVEALTADLAKAHADLAEANKPKPTATTPAKGR
>NZ_LT962688.1|WP_101475358.1|471569_472516_-|IS630-family-transposase
MGSPLSSDLRARVVKAVSAGASRRQAAERFGVSPASAIRWQESFEREGRVAAKPQGGDRRSQHLEARAELILKLRLGRPMLTLSEVRALLAERGIATSESSLSRFFRRHAVTHKKNTLHAAEQQRPNVKAEREDWFEAQDELDPDSLVFLDETATTTNMVRRYGWAVRGERCRVAVPHGHWKTTTVTAALRTSGVAATALFDGATNGQRFRAYVTDTLVPVLKRGDTVIMDNLGAHKVAGVREAIQAVGAKLLYLPPYSPDLNPIEQIFAKLKADLRKAAARTLPDLKAAIRSALDSLTPKACRNCLTAAGYDPT
>NZ_LT962688.1|WP_157937210.1|472637_474779_-|VCBS-repeat-containing-protein
MTTRLLPVASLSQVNQIDNGFSQNNPSAAYLQGGNWIVSWNNAAFSNIEAQLFGFAFNTAGQEFALTGPRAQNASLAGLTSGGLAAVYQSGGTTSVNRYNIDNQAVSYAATENITASRSTDDLSISGLPGNGYVVAYEGLGVSGTDRGGIYAAIWNGFTINTITVASNTFFETGFSFQRQWTATNRTDPSMSAAANGTFVVAYQSQSDGNTVRPPDQLGYSIFTSNGEGLNSGLLSSSFGEREQYEVDTAALSNDRFVFTWTDTDRGQTDIHAAVVDSRGTVIRGDFLVNEYVTGNQTNSTVAALDDGGFFVSWFDNARNMIVGETYDANGSAVGSNVLIANAVSVDSMDLINIGGRRLALAYDRIAAGDTDIAGAIIGPRSTTSVNGDTNTDIIWHNTGGQTALWAMSGNEILFGNNFISSNGTTVAPGSDWSVAGTGDFNSDSTTDVLWRNVDGSIDIWTMGGGPLANQIVASNHVTVGNTPVRLGPEWQVADTADFTGDGASEILWRNSNTGRLDVWTMFGSQLVGSNPITASNTVVAPGSDWSIAAATDLTGDGRADILWRNASGALDLWTMNGAQLVVSANVTAGGSIVAPGPDWSIAAVNDFTGNGHADLLWRNTNGQVDLWTMNGAQLVRSDHVTAGGLSVAPGSDWHVAGSGDFNGDGYADVLWQNDNGSVDIWNMNGAQLTASNHVTQQGFGAVSLDASWMVVG

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_LT962688_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LT962688_2

666539-666671

Orphan

Consensus_repeat	Method
CGCCGATGAGCGTGTCGTCGCCCGC	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_LT962688_2

>merge|NZ_LT962688|2|666539-666671|CRISPRCasFinder
CGCCGATGAGCGTGTCGTCGCCCGCACCCCCGTCCAGCGCGTCGTTCCCGTCCGCGCCGATGAGCGTGTCGTTGCCCGCGCCGCCGAAGAGCTTGTCGTCGCCCCAGCCGCCGTCGATCCAGTCGTCACCGCC

>NZ_LT962688|2|2|666539-666671|CRISPRCasFinder
CGCCGATGAGCGTGTCGTCGCCCGC	ACCCCCGTCCAGCGCGTCGTTCCCGTCCG
CGCCGATGAGCGTGTCGTTGCCCGC	GCCGCCGAAGAGCTTGTCGTCGCCCCAGC
CGCCGTCGATCCAGTCGTCACCGCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LT962688.1\|WP_003601878.1\|669234_669705_+\|Hsp20-family-protein	unknown	unknown	gnl\|CDD\|182691
NZ_LT962688.1\|WP_101475418.1\|668059_669052_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|225176
NZ_LT962688.1\|WP_085856339.1\|673709_674198_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LT962688.1\|WP_056505425.1\|672079_673159_-\|AI-2E-family-transporter	unknown	unknown	gnl\|CDD\|223701
NZ_LT962688.1\|WP_003604409.1\|658969_659473_+\|pyridoxamine-5'-phosphate-oxidase-family-protein	unknown	unknown	gnl\|CDD\|379804
NZ_LT962688.1\|WP_056505419.1\|675189_676335_+\|beta-ketoacyl-ACP-synthase	unknown	unknown	gnl\|CDD\|235819
NZ_LT962688.1\|WP_101476431.1\|673201_673498_-\|diguanylate-cyclase	unknown	unknown	gnl\|CDD\|143635
NZ_LT962688.1\|WP_056505431.1\|660941_661724_+\|5-oxoprolinase-subunit-PxpA	unknown	unknown	gnl\|CDD\|212099
NZ_LT962688.1\|WP_056154902.1\|670122_670536_-\|cupin-domain-containing-protein	unknown	unknown	gnl\|CDD\|226586
NZ_LT962688.1\|WP_015857569.1\|671205_672075_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371337
NZ_LT962688.1\|WP_003601886.1\|674403_674700_+\|acyl-carrier-protein	unknown	unknown	gnl\|CDD\|180597
NZ_LT962688.1\|WP_085856342.1\|652582_653407_-\|porin-family-protein	unknown	unknown	gnl\|CDD\|226163
NZ_LT962688.1\|WP_056506475.1\|664048_664840_+\|histidinol-phosphatase	unknown	unknown	gnl\|CDD\|238819
NZ_LT962688.1\|WP_003604672.1\|653627_656363_-\|DNA-gyrase-subunit-A	unknown	unknown	gnl\|CDD\|235502
NZ_LT962688.1\|WP_003601887.1\|674728_675193_+\|beta-hydroxyacyl-ACP-dehydratase	unknown	unknown	gnl\|CDD\|223835
NZ_LT962688.1\|WP_056505438.1\|658547_658820_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LT962688.1\|WP_082509174.1\|656687_657287_-\|molybdenum-cofactor-guanylyltransferase-MobA	unknown	unknown	gnl\|CDD\|234725
NZ_LT962688.1\|WP_056505443.1\|657328_658456_-\|Mrp/NBP35-family-ATP-binding-protein	unknown	unknown	gnl\|CDD\|378455
NZ_LT962688.1\|WP_085856341.1\|659632_660931_+\|nicotinate-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|235406
NZ_LT962688.1\|WP_101475416.1\|661953_663993_+\|AI-2E-family-transporter	unknown	unknown	gnl\|CDD\|223701

Protein	Function_ID	Function_description	E-value
NZ_LT962688.1\|WP_003601878.1\|669234_669705_+\|Hsp20-family-protein	gnl\|CDD\|182691	PRK10743, PRK10743, heat shock chaperone IbpA.	5.60224e-56
NZ_LT962688.1\|WP_101475418.1\|668059_669052_-\|alpha/beta-hydrolase	gnl\|CDD\|225176	COG2267, PldB, Lysophospholipase [Lipid metabolism].	3.11777e-55
NZ_LT962688.1\|WP_003604409.1\|658969_659473_+\|pyridoxamine-5'-phosphate-oxidase-family-protein	gnl\|CDD\|379804	pfam16242, Pyrid_ox_like, Pyridoxamine 5'-phosphate oxidase like. This domain, approximately 140 residues in length, is mainly found in general stress proteins in various Xanthomonas species. It is composed of a six-stranded antiparallel beta-barrel flanked by five alpha-helices and can bind to FMN and FAD, suggesting that it may help the bacteria to react against the oxidative stress induced by the defense mechanisms of the plant.	2.87896e-61
NZ_LT962688.1\|WP_056505419.1\|675189_676335_+\|beta-ketoacyl-ACP-synthase	gnl\|CDD\|235819	PRK06519, PRK06519, beta-ketoacyl-ACP synthase.	0
NZ_LT962688.1\|WP_101476431.1\|673201_673498_-\|diguanylate-cyclase	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	8.87726e-18
NZ_LT962688.1\|WP_056505431.1\|660941_661724_+\|5-oxoprolinase-subunit-PxpA	gnl\|CDD\|212099	cd10787, LamB_YcsF_like, LamB/YcsF family of lactam utilization protein. The LamB/YbgL family includes the Aspergillus nidulans protein LamB, and its homologs from all three kingdoms of life. The lamb gene locates at the lam locus of Aspergillus nidulans, consisting of two divergently transcribed genes, lamA and lamB, needed for the utilization of lactams such as 2-pyrrolidinone. Both genes are under the control of the positive regulatory gene amdR and are subject to carbon and nitrogen metabolite repression. Although the exact molecular function of LamB is unknown, it might be required for conversion of exogenous 2-pyrrolidinone to endogenous GABA.	6.42458e-128
NZ_LT962688.1\|WP_056154902.1\|670122_670536_-\|cupin-domain-containing-protein	gnl\|CDD\|226586	COG4101, COG4101, Predicted mannose-6-phosphate isomerase [Carbohydrate transport and metabolism].	8.85759e-60
NZ_LT962688.1\|WP_015857569.1\|671205_672075_+\|hypothetical-protein	gnl\|CDD\|371337	pfam11004, Kdo_hydroxy, 3-deoxy-D-manno-oct-2-ulosonic acid (Kdo) hydroxylase. This is a family of 3-deoxy-D-manno-oct-2-ulosonic acid 3-hydroxylases, which catalyze the conversion of 3-deoxy-D-manno-oct-2-ulosonic acid (Kdo) to D-glycero-D-talo-oct-2-ulosonic acid (Ko). It contains a potential iron-binding motif, HXDX(n)H (n>40). Hydroxylation activity is iron-dependent.	3.88528e-116
NZ_LT962688.1\|WP_003601886.1\|674403_674700_+\|acyl-carrier-protein	gnl\|CDD\|180597	PRK06508, PRK06508, acyl carrier protein; Provisional.	2.69552e-56
NZ_LT962688.1\|WP_085856342.1\|652582_653407_-\|porin-family-protein	gnl\|CDD\|226163	COG3637, COG3637, Opacity protein and related surface antigens [Cell envelope biogenesis, outer membrane].	6.05237e-08
NZ_LT962688.1\|WP_056506475.1\|664048_664840_+\|histidinol-phosphatase	gnl\|CDD\|238819	cd01641, Bacterial_IMPase_like_1, Predominantly bacterial family of Mg++ dependend phosphatases, related to inositol monophosphatases. These enzymes may dephosphorylate fructose-1,6-bisphosphate, inositol monophospate, 3'-phosphoadenosine-5'-phosphate, or similar substrates.	7.92298e-116
NZ_LT962688.1\|WP_003604672.1\|653627_656363_-\|DNA-gyrase-subunit-A	gnl\|CDD\|235502	PRK05560, PRK05560, DNA gyrase subunit A; Validated.	0
NZ_LT962688.1\|WP_003601887.1\|674728_675193_+\|beta-hydroxyacyl-ACP-dehydratase	gnl\|CDD\|223835	COG0764, FabA, 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases [Lipid metabolism].	1.50796e-32
NZ_LT962688.1\|WP_101475416.1\|661953_663993_+\|AI-2E-family-transporter	gnl\|CDD\|223701	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only].	1.98806e-60
NZ_LT962688.1\|WP_082509174.1\|656687_657287_-\|molybdenum-cofactor-guanylyltransferase-MobA	gnl\|CDD\|234725	PRK00317, mobA, molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed.	3.62398e-74
NZ_LT962688.1\|WP_056505425.1\|672079_673159_-\|AI-2E-family-transporter	gnl\|CDD\|223701	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only].	2.54053e-35
NZ_LT962688.1\|WP_085856341.1\|659632_660931_+\|nicotinate-phosphoribosyltransferase	gnl\|CDD\|235406	PRK05321, PRK05321, nicotinate phosphoribosyltransferase; Provisional.	0
NZ_LT962688.1\|WP_056505443.1\|657328_658456_-\|Mrp/NBP35-family-ATP-binding-protein	gnl\|CDD\|378455	pfam10609, ParA, NUBPL iron-transfer P-loop NTPase. This family contains ATPases involved in plasmid partitioning. It also contains the cytosolic Fe-S cluster assembling factor NBP35 which is required for biogenesis and export of both ribosomal subunits.	1.41032e-150

>NZ_LT962688.1|WP_056506475.1|664048_664840_+|histidinol-phosphatase
MSVVDLAQFMEDLATQSGAAILPFFRAHFGLDDKSHGTGHAFDPVTEADRAAEAVMRRMINDRLPNHGILGEEFGSERADAECVWVLDPIDGTRAFISGLPTWGTLIGLTHHGAAVRGLMHQPYLGERFLGDGKTASVRSAKGERPLHTRRNEALGNAILATTDPRLFTEGEEAERFRTIEGKVKMSRYGTDCYAYCMLAAGQIDLVVEAGLKPYDIVALIPIVEGAGGVVTSWDGGPATGGGRIVAAGDRRLHDAALKVLNP
>NZ_LT962688.1|WP_101475416.1|661953_663993_+|AI-2E-family-transporter
MKRISTGEGFIVPPRPARVSAAETPKGPLASSLVVFAIIVAGLFFAREVLIPIAIAVLLSFVLGPLVNFLRRLKLGRAFAVLVSVLLAAGIIAAVTTVIGVQVAELAQDVPRYQRTVERKIEGLRAGTLGQTMDYIANINRAIHQSGEESKESAEKAKQQAARDSNRKAEPEPPKPLLVQVEERRPGPLELATTVLAPVAQPLATAGIVFVVLLFILMQREDLRDRLIRLAGSSDLHRTTVAMDDAARRLSRYFLGQLALNSAFGVVIGVGLWIIGVPSPVLWGIFALVMRFVPYIGAFLSAVLPIALAAAVDPGWSMVLSTFLLFALVEPIVGQIIEPLVYGHSTGVSPFSVLVSALFWTWLWGPVGLLLSTPLTVCLVVLGRHVDRLEFLDVLFSNRPALTPIENFYQRMLADDPEEAQEHADLILRECSLSAYYDDVVLKGLELASRDAARGVLTPSQKDEIRASITALVEDLEDREDAVPDPASKPTRLFDGAGAAGDGESACKNGPIADPDPDELPAAWQADGAVLLVSGRGFLDGAATAIADQLLRKRGFGTRQVPFAEVARVRIAEWQPGPAQAVCVISLALSGEPTHLRRLVSRLRQKIDTVPIVAGLWRLDEPMLADDAVLAKIGADDHVTSLRDLIETILALARNEGGPDRSERSDAATPPRQALPEPA
>NZ_LT962688.1|WP_056505431.1|660941_661724_+|5-oxoprolinase-subunit-PxpA
MSAARIDLNADLGEGFGPWRMGDDAALLDIVTSANVACGFHAGDPDIMVETVIAARARGVAIGAHPGFHDLRGFGRNRIQESPTKIERDIAYQIGALQACAALAGARVTHVKAHGALANLSNEDAAIAEALARAVAGVDPDLALVVMPGLPAERAGERFGLRLVREIYADRAYAEDGTLAPRASPGAVIHDAGEAAARVARMVGEGAVFTLGGRRVPVAIDTVCVHGDNPEALAMARAVRAELERAGFSLRPFAEPSATS
>NZ_LT962688.1|WP_085856341.1|659632_660931_+|nicotinate-phosphoribosyltransferase
MIDLAKRVYDHNFRIDPIVRSLLDTDFYKLLMAQMIFRRHRDLRVSFGIQNRTRSVRVADEIDLGELRAQLDHARTIRLSRGESTWLRGNTFYGKRQILSSEFMAWLEAFRLPDYELEVRDGQVALTFHGPWVETTMWEVPALAILNEMRSRAVLRGLGKFELQVLYARAMTRVWEKIERLKRLPDLSIADFGTRRRHGFLWQDWCVQAMNEGLGERAFLGTSNCLIAMRREVEAVGTNAHELPMVYAALAGDDDEALAAAPYAVLADWQQDYAGNLLVALPDTYGTTGFLAKAPDWLTAWTGIRIDSKEPIAGGEEALAFWESRGCDPREKLAIFSDGLDVDDIEAIHAHFHGRMRIGYGWGTRLTNDFRGLVPEGRLDPISVVCKVTEAEGRPTVKISDNPSKAQGPAAEVERYKRVFGVEEQAAMAVAV
>NZ_LT962688.1|WP_003604409.1|658969_659473_+|pyridoxamine-5'-phosphate-oxidase-family-protein
MHQGNHRDHEGAKKLFELVKDVKVAMLTTADQDGTLNSRPMWNNEIDENGDVWFFTKLHSPKTAEIGRDNQVNLSYSDPSSQTYVSIAGKAEVIRDQKLIDEKWQESLKTWFPNGKNDPEVGLIRIHPEQGEYWDSPSSTMVHLYGYVKASLTGESPKTETKKVNLA
>NZ_LT962688.1|WP_056505438.1|658547_658820_-|hypothetical-protein
MRGALLALLLAATALPATAEVRFGPGVRIGGHDFSNRRSRSVHIERVKRLRGPVGCRHLRRGVYRRGDGSVVRGPMEECNLIAIPPGRQR
>NZ_LT962688.1|WP_056505443.1|657328_658456_-|Mrp/NBP35-family-ATP-binding-protein
MAITRDDVLKALSTVTVDRGGTTLPDSGRLSQVVIDPGNRVMFSIRIDPSEAERFEPVRREAEGRVLALSGVSSVLASLTSERAPNPPAPGAAPRQPAGGPGAPPRQGNALPGVRHIVAVASGKGGVGKSTTACNLALALSAQGLRVGLLDADIYGPSVPKLLGLSGKPRVIEGKTLEPLQAYGLKAMSIGLLIEPESAMIWRGPMVQSAITQMLRDVAWGELDVLIVDMPPGTGDAQLTMAQATPLSGAVIVSTPQDLALIDARRGVTMFRKVSVPILGVIENMATFICPNCGAASAIFGHGGARHEAERLQVPFLGEIPLTMAIRETSDAGRPVVATDPDGPQAKIYREIAGKLWANLSGAPAGRAAPKIVIE
>NZ_LT962688.1|WP_082509174.1|656687_657287_-|molybdenum-cofactor-guanylyltransferase-MobA
MGLILAGGLSRRMGGGDKPLRQLAGRTLLERVAERLGPQCAGGLALSANGDPARFCAAFSGSVLPDTVPDNPGPLAGILAGLEAAGEAGLTHIVSVPGDAPFLPEDFVARLVAVAAAEGQPIALAASGERRHFTSALWPAALREDLRGWLASGERRVGGFIERHGAAVASWPVEPVDPFLNLNAPEDLAAAEALLARVP
>NZ_LT962688.1|WP_003604672.1|653627_656363_-|DNA-gyrase-subunit-A
MADDNDQPGAGTPPPATDIKPVSITDEMRRSYLDYAMSVIVSRALPDARDGLKPVHRRILFAAHESGHLPERRYVKSARIVGDVIGKYHPHGDQSIYDALVRMAQDFSMRLMLIDGQGNFGSVDGDPAAAMRYTESRLAKPASALLSDIDKNTVDFQANYDGEHEEPTVLPARFPNLLVNGAGGIAVGMATNIPPHNLGELIDACIALIDDPSLTIEALNEIVPGPDFPTGGLILGRAGTRQAYATGRGSIIMRAKSHIEELRKEREALIFTEIPYQVNKATLVEKIAELVKEKRVEGISDLRDESDRDGMRIVVEIKRDAMAEVVLNQLYRYTPLQSSFGCNMVALNGGRPELMNLKDLLLAFNDFREEVVSRRTKFLLNKARERAHVLCGLAIAVANIDEVIRLIRTSPDPNTAREALMARDWPAHDIAPLIALVDDPRYRVAEDGTYRLSEIQARAILDLRLQRLTALGRDEVGDELKKLADEIADYLDILRSRVRIQAIVKTELAEVRALFATPRKTEIIDSDFSVEDEDLIAREDMVVTVSHAGYVKRVPLSTYRAQRRGGKGRSGMATRDEDFVTRLFVASTHTPVLFFSDQGQAYKEKVWRLPMAAPNARGKALVNILHLQNEGERISTIMPLPEDETSWDTLDVMFATASGNVRRNKLSDFTTVNRNGKIAMKLDPGDHIVHVEICRPEQNVLLTTALGQCIRFPVEDVRVFKGRDSTGVRGINLAQDDKVISMAILNAFDASPEERAGYLKMRRAVIGDAGEAEAEPAEAEEASEASAISLERYNEMGAAEQFVLTLSDRGFGKRSSSYEYRTSGRGGKGITAMRVNARNGNLVASFPVEASDQIMLVTNAGQLIRVPVDDIRIVGRASQGVTVFNTDKAERVVSVEHIEGEDENENGEEAV
>NZ_LT962688.1|WP_085856342.1|652582_653407_-|porin-family-protein
MRNSLILSGFAGILLSGTALAADLPRRAEAPVFTPIPVFAWTGAYFGPNGGYAYTESDTLRTTGIGALQANVTNDLRRANVALPKDGFSFGGQAGYNFQLTPGTGFVFGFETDAQYLDLARSRTETIFRPAINPNVLRNVYAADLDFLGTVRGRVGYAFDRVLVYGTGGFAYGTTTLAAVFRTGTPVTYAGARSGLETGYAYGGGIEYAIPANSFLDLTGSLQMTVKAEYLRYDLGSRTVLIRSTGGPGVGYNIESRTEGALARVGLNFGFGTY
>NZ_LT962688.1|WP_101475418.1|668059_669052_-|alpha/beta-hydrolase
MLTLRPTPGNPVPPGARLVPVETADGVSLRAATWQPTTRGVKGTVCLLQGRAEFIEKYFETISDLRARGFCVVAFDWRGQGDSGRQVRDAHKGHVRHFDDYRLDLKAITETVLVPMMPEPHFGLAHSMGGAVALTLAAEGRLPFRRLVTVAPMLAIRMVRWPAGASLLARGLQRLGLGRCYIPFGTAVSIATKPFAGNRLSTDPVRYARNAEAARAVGAGAVGDPTIAWLAAAFRAMRRLADPALIRRIRTPCLIVAAGADPVCSTPAVERFAARLKTGHLIVLPGARHEILTECDAVRADFWAAFDAFIPGHLVHSAVGETAPHATIAG
>NZ_LT962688.1|WP_003601878.1|669234_669705_+|Hsp20-family-protein
MRQFDLAPLYRSTVGFDRLFSALDGFVSTEAAPTYPPYNIERTGENVYRVTVAVAGFTEADLSIEVKENALTIKGERKPAEGKSAEVLYQGIAARAFERRFQLADHVQVTGAVLENGLLHVDLVREVPEAKKPRRIEIASRPSSQPVIEGSVQQAA
>NZ_LT962688.1|WP_056154902.1|670122_670536_-|cupin-domain-containing-protein
MTGTGAALCRVVRPGKAFIGKQGLSYAPGISAETAGATGLHLQMVTIPPGARAKAHKHEGHETAIYALAGTSCTWWGERLEHHTELRPGEYFYIPAGMPHLPYNPSPTEPCTALIARTDPNEQESVVLLPELDGIHP
>NZ_LT962688.1|WP_015857569.1|671205_672075_+|hypothetical-protein
MISPVLPVSRAEAVPGAPGLVEALESGSVLVFRDLDFPFDAFEQRFVERPFADGKAKNVAIRNETAELRGGAGSAEEQARLRDLLVRYRRFAENLIDTYLPAYREKVSLAGTSYRPFDVDKRKLSWRRDDTRMHVDAFPSNPIGERRILRIFRNINAEGQPRLWRVGEDFGSMAEKFLPKLPGYSGLSASVLAALKITKAKRSEYDHLMLHLHDALKRDLDYQANAPQADVRFQPGETWVTFSDLVMHGAMGGRYMLEQTAYIAVADQADPEKSPQRILAKKLGRPLKH
>NZ_LT962688.1|WP_056505425.1|672079_673159_-|AI-2E-family-transporter
MGGTDRTEPELARSQRVLRALLVAALLALGLYILSGFLRALVWAVVLAIALWPLFVRAHRRFPPGRHNILWPAVFTGLVALVLLLPIAVLAVEAGREAHDLLAYAREAERNGIPVPDFVARLPYGAAAVTEWWNAHLAHAGLAHELSERLNTTSNRDLTRSLGAGLVHRAVLFGFCLLALFFLFREGDTVIAQSLRASHRLFGPRGERVARQMVASVHGTVDGLVLVGIGEGFLLGIVYAFAGVPHPVLFGALTAVAAMIPFGAPLAFGIAAVLLLAGGAVAPAAIVVAAGFVVTFVADHFVRPALIGGTTRLPFLWVLLGILGGVETFGLLGLFVGPAVMAALILLWREFTEGSEGPA
>NZ_LT962688.1|WP_101476431.1|673201_673498_-|diguanylate-cyclase
MGPDACLVRLGSEEFVLLVPGRSPAEARWLAEEIRHPVARVDDLTAWTISLGVSAVEPGEADFSAAIERAARSLYRAKAQGVTVPRPEAASGLPLCPP
>NZ_LT962688.1|WP_085856339.1|673709_674198_+|hypothetical-protein
MIEIGFDDDGLDRPAPAARQPSPDRDWRILEEGLEHPASGYFIAREEIASRRGDGLWTWPMQLAEKAWCAPLGFRRVFLAALDRYGVATDTDLARSFALGFGIQDAGQRHNDQFVALGELVRPRTAERKRTAPAEGRRTGRERPRQGADTRAPALDLSRSAG
>NZ_LT962688.1|WP_003601886.1|674403_674700_+|acyl-carrier-protein
MSNETATFDRVADIIAETADIPRDKITPESHAIDDLGIDSLAFLDIAFAVDKAFGIKLPLERWTQEVNEGKVPAEQYFVLKNLCARIDALVAEKAAKA
>NZ_LT962688.1|WP_003601887.1|674728_675193_+|beta-hydroxyacyl-ACP-dehydratase
MRLEYFEMIDSVVRLDRAAGRIEARALVPEASPVFEGHFPGHPLVPGVLLTETMAQASGYLVLAHLDFAQMPFLMAVDKARFRSFVGPGAALEITATLEHDGSGYAVTKAAIRHEGKALCDAELRFRTMPFPAGLDAPMRERARKIGLLDGAQP
>NZ_LT962688.1|WP_056505419.1|675189_676335_+|beta-ketoacyl-ACP-synthase
MSRPQARDVVVTGIGLVSCAGEGIETHLNAFASHAPPRTDAETFAPYPVHPVAPVSLDAQIPKKSDQRQMEAWQRLGVYAAGLALDSAGVKEDAGFKSALPLVVAAGGGERDYAVDGAILTGLRGTNDPGAFLNERLLNDLRPTLFLAQLSNLLAGNISIVHGVTGASRTFMGEESSGVDALRIGHARIASGQVDTMMVGGSYNAERPDVMVVHEMGGYLLKTAYRPVFERGAEGTSGFVLGSAAAFLVLEAAEHAAARGARALARLMPVANDRVARAPGSVSASLTRLIGEAGIERPDVVLSGATGLADLAAEEIAGLDAALPGARIRATGDMIGHPMEVAAPFGAALAAALCAAGSAAEVAVTSVGHRRGEGVIRVVRI

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_LT962688_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LT962688_3

2566422-2566495

Orphan

Consensus_repeat	Method
TGGCCGTGATGGTGATGGCGGTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LT962688_3

>merge|NZ_LT962688|3|2566422-2566495|CRISPRCasFinder
TGGCCGTGATGGTGATGGCGGTGGCCCCAGTGGCGGCGGTGATGCCCCCAATGGCCGTGATGGTGGTGGCGGTG

>NZ_LT962688|3|3|2566422-2566495|CRISPRCasFinder
TGGCCGTGATGGTGATGGCGGTG	GCCCCAGTGGCGGCGGTGATGCCCCCAA
TGGCCGTGATGGTGGTGGCGGTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LT962688.1\|WP_003606673.1\|2559550_2560300_+\|lysophospholipid-acyltransferase-family-protein	unknown	unknown	gnl\|CDD\|153245
NZ_LT962688.1\|WP_003606671.1\|2557873_2558350_+\|response-regulator	unknown	unknown	gnl\|CDD\|381150
NZ_LT962688.1\|WP_101475778.1\|2565038_2566349_+\|thymidine-phosphorylase	unknown	unknown	gnl\|CDD\|180276
NZ_LT962688.1\|WP_056500009.1\|2576787_2578488_-\|DNA-repair-protein-RecN	unknown	unknown	gnl\|CDD\|223571
NZ_LT962688.1\|WP_012254285.1\|2576497_2576791_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235549
NZ_LT962688.1\|WP_003603953.1\|2566966_2567623_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226472
NZ_LT962688.1\|WP_056456273.1\|2560296_2561601_+\|3-deoxy-D-manno-octulosonic-acid-transferase	unknown	unknown	gnl\|CDD\|235589
NZ_LT962688.1\|WP_056500014.1\|2571779_2572856_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LT962688.1\|WP_101475779.1\|2567781_2568939_-\|molecular-chaperone-DnaJ	unknown	unknown	gnl\|CDD\|236757
NZ_LT962688.1\|WP_003607557.1\|2562674_2562899_-\|DUF2093-domain-containing-protein	unknown	unknown	gnl\|CDD\|370729
NZ_LT962688.1\|WP_056500023.1\|2563043_2563457_+\|cytidine-deaminase	unknown	unknown	gnl\|CDD\|273572
NZ_LT962688.1\|WP_056500007.1\|2578643_2579630_+\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|372681
NZ_LT962688.1\|WP_157937251.1\|2568940_2569330_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LT962688.1\|WP_056118374.1\|2576141_2576414_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226748
NZ_LT962688.1\|WP_085857388.1\|2561608_2562592_+\|tetraacyldisaccharide-4'-kinase	unknown	unknown	gnl\|CDD\|234808
NZ_LT962688.1\|WP_085857387.1\|2563446_2564259_+\|purine-nucleoside-phosphorylase	unknown	unknown	gnl\|CDD\|236183
NZ_LT962688.1\|WP_015823233.1\|2569514_2571434_-\|molecular-chaperone-DnaK	unknown	unknown	gnl\|CDD\|234715
NZ_LT962688.1\|WP_015823242.1\|2558365_2559313_-\|metallophosphoesterase	unknown	unknown	gnl\|CDD\|224327
NZ_LT962688.1\|WP_056500006.1\|2579909_2580785_-\|outer-membrane-protein-assembly-factor-BamD	unknown	unknown	gnl\|CDD\|274513
NZ_LT962688.1\|WP_056500018.1\|2564268_2565042_+\|deoxyribose-phosphate-aldolase	unknown	unknown	gnl\|CDD\|235387

Protein	Function_ID	Function_description	E-value
NZ_LT962688.1\|WP_003606673.1\|2559550_2560300_+\|lysophospholipid-acyltransferase-family-protein	gnl\|CDD\|153245	cd07983, LPLAT_DUF374-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: DUF374. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are the uncharacterized DUF374 phospholipid/glycerol acyltransferases and similar proteins.	6.95148e-57
NZ_LT962688.1\|WP_003606671.1\|2557873_2558350_+\|response-regulator	gnl\|CDD\|381150	cd19923, REC_CheY_CheY3, phosphoacceptor receiver (REC) domain of chemotaxis response regulator CheY3 and similar CheY family proteins. CheY family chemotaxis response regulators (RRs) comprise about 17% of bacterial RRs and almost half of all RRs in archaea. This subfamily contains Vibrio cholerae CheY3, Escherichia coli CheY, and similar CheY family RRs. CheY proteins control bacterial motility and participate in signaling phosphorelays and in protein-protein interactions. CheY RRs contain only the REC domain with no output/effector domain. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	7.25552e-21
NZ_LT962688.1\|WP_101475778.1\|2565038_2566349_+\|thymidine-phosphorylase	gnl\|CDD\|180276	PRK05820, deoA, thymidine phosphorylase; Reviewed.	0
NZ_LT962688.1\|WP_056500009.1\|2576787_2578488_-\|DNA-repair-protein-RecN	gnl\|CDD\|223571	COG0497, RecN, ATPase involved in DNA repair [DNA replication, recombination, and repair].	0
NZ_LT962688.1\|WP_012254285.1\|2576497_2576791_+\|hypothetical-protein	gnl\|CDD\|235549	PRK05658, PRK05658, RNA polymerase sigma factor RpoD; Validated.	0.000126283
NZ_LT962688.1\|WP_003603953.1\|2566966_2567623_-\|hypothetical-protein	gnl\|CDD\|226472	COG3963, COG3963, Phospholipid N-methyltransferase [Lipid metabolism].	4.55497e-51
NZ_LT962688.1\|WP_056456273.1\|2560296_2561601_+\|3-deoxy-D-manno-octulosonic-acid-transferase	gnl\|CDD\|235589	PRK05749, PRK05749, 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed.	1.32977e-152
NZ_LT962688.1\|WP_101475779.1\|2567781_2568939_-\|molecular-chaperone-DnaJ	gnl\|CDD\|236757	PRK10767, PRK10767, chaperone protein DnaJ; Provisional.	0
NZ_LT962688.1\|WP_003607557.1\|2562674_2562899_-\|DUF2093-domain-containing-protein	gnl\|CDD\|370729	pfam09866, DUF2093, Uncharacterized protein conserved in bacteria (DUF2093). This domain, found in various hypothetical prokaryotic proteins, has no known function.	5.76231e-24
NZ_LT962688.1\|WP_056500023.1\|2563043_2563457_+\|cytidine-deaminase	gnl\|CDD\|273572	TIGR01354, Cytidine_deaminase, cytidine deaminase, homotetrameric. This small, homotetrameric zinc metalloprotein is found in humans and most bacteria. A related, homodimeric form with a much larger subunit is found in E. coli and in Arabidopsis. Both types may act on deoxycytidine as well as cytidine. [Purines, pyrimidines, nucleosides, and nucleotides, Salvage of nucleosides and nucleotides].	4.45888e-56
NZ_LT962688.1\|WP_056500007.1\|2578643_2579630_+\|glycosyltransferase-family-2-protein	gnl\|CDD\|372681	pfam13704, Glyco_tranf_2_4, Glycosyl transferase family 2. Members of this family of prokaryotic proteins include putative glucosyltransferases,.	1.65635e-12
NZ_LT962688.1\|WP_056118374.1\|2576141_2576414_+\|hypothetical-protein	gnl\|CDD\|226748	COG4298, COG4298, Uncharacterized protein conserved in bacteria [Function unknown].	2.44462e-24
NZ_LT962688.1\|WP_085857388.1\|2561608_2562592_+\|tetraacyldisaccharide-4'-kinase	gnl\|CDD\|234808	PRK00652, lpxK, tetraacyldisaccharide 4'-kinase; Reviewed.	8.37462e-109
NZ_LT962688.1\|WP_085857387.1\|2563446_2564259_+\|purine-nucleoside-phosphorylase	gnl\|CDD\|236183	PRK08202, PRK08202, purine nucleoside phosphorylase; Provisional.	2.8534e-127
NZ_LT962688.1\|WP_015823233.1\|2569514_2571434_-\|molecular-chaperone-DnaK	gnl\|CDD\|234715	PRK00290, dnaK, molecular chaperone DnaK; Provisional.	0
NZ_LT962688.1\|WP_015823242.1\|2558365_2559313_-\|metallophosphoesterase	gnl\|CDD\|224327	COG1409, Icc, Predicted phosphohydrolases [General function prediction only].	1.53022e-23
NZ_LT962688.1\|WP_056500006.1\|2579909_2580785_-\|outer-membrane-protein-assembly-factor-BamD	gnl\|CDD\|274513	TIGR03302, OM_YfiO, outer membrane assembly lipoprotein YfiO. Members of this protein family include YfiO, a near-essential protein of the outer membrane, part of a complex involved in protein insertion into the bacterial outer membrane. Many proteins in this family are annotated as ComL, based on the involvement of this protein in natural transformation with exogenous DNA in Neisseria gonorrhoeae. This protein family shows sequence similarity to, but is distinct from, the tol-pal system protein YbgF (TIGR02795). [Protein fate, Protein and peptide secretion and trafficking].	2.717e-95
NZ_LT962688.1\|WP_056500018.1\|2564268_2565042_+\|deoxyribose-phosphate-aldolase	gnl\|CDD\|235387	PRK05283, PRK05283, deoxyribose-phosphate aldolase; Provisional.	5.546e-95

>NZ_LT962688.1|WP_101475778.1|2565038_2566349_+|thymidine-phosphorylase
MRLPQEIIRDKRDGRALSEADIAGFIEGLTRDQVTEGQAAAFAMAVFFRGLSLDERVALTRAMTHSGTVLAWDLPGPVLDKHSTGGVGDTVSLPLAAMVAACGGYVPMISGRGLGHTGGTLDKLASIPGYDVTPGLNRFRKVTAEAGCAIIGQTAELAPADRRLYAIRDVTGTVESLDLITASILSKKLAAGLQGLVMDVKTGSGAFMARREDAQALAESIVTVANAAGLRTRALITDMDAPLASCAGNAVEVAYAVDYLTSRAREPRFHAVTMALATEMLVIGGLAANIAEAEGRLTAALESGRACEAFARMVAALGGPGDFVEAADRHLPPAPVVRPVLAQEAGVVEAVETRAIGLAVIDLGGGRTRPQDAIDARVGFTGLARPGDQLSPNDPIGIVHAADDAAAKRAAASLRAAYRIGATPPEPRKAVLERLG
>NZ_LT962688.1|WP_056500018.1|2564268_2565042_+|deoxyribose-phosphate-aldolase
MTASAPLPPQDAARVRADLARRALPLLDLTDLSDACTAAAVEELCEKARASGVAAVCVWPRFVADSVRGLRGSGVRVATVVNFPEGGEAVERTVAETQATLADGADEIDLVLPYRALMRGDAESARAMVEAVRAACAGRLLKVILETGELEDPDLIAQASRLSLEAGADFIKTSTGKTVVSATLPAAEIMLDAIRARGDDRPVGLKVSGGLRRVEDAAAYLALADRIMGPDWASPNTFRLGASALHAELVRAGEAAR
>NZ_LT962688.1|WP_085857387.1|2563446_2564259_+|purine-nucleoside-phosphorylase
MAPDDAAIAPLRAAGFAGPYALAIVTGTGLGALVEAVADRVSLDYAAIPGFPAPGVSGHGGRLHRGRLSGRPVLVFEGRTHAYETGDAAAMRVPLAAARALGAARLLLTNAAGSLRPEIGPGRLVMLADHINLSGLNPLIGEPSDARFVPMTEAYDPGLRAHLSAAAEAIGLPLPTGVYAWFSGPSFETPAEVRMAGILGADLVGMSTVPETILARFLGMPVAAISVVTNLAAGIAGGDPHHAETKAVAARAGADLARLVAGFVGRLPEA
>NZ_LT962688.1|WP_056500023.1|2563043_2563457_+|cytidine-deaminase
MTEPDFDALFAAAAAVRARAHAPYSGFAVGAALVDDAGRVHAGCNVENAAYPVGTCAEAGAIAAMIAAGGRQIRAILVLADSPAPVTPCGACRQRIREFARPDTPILSAGPDGVRARYTLEQLLPASFGPEHFVHGA
>NZ_LT962688.1|WP_003607557.1|2562674_2562899_-|DUF2093-domain-containing-protein
MLGRYDRGSTGGEAKVEYGDGTMRVVKPGTYVRCAVTGEPIALDALRYWNVDRQEAYATPEAAMQRLKETGAAR
>NZ_LT962688.1|WP_085857388.1|2561608_2562592_+|tetraacyldisaccharide-4'-kinase
MRPPGFWSRPPTHPLARLLAPAGRVYGGLTADRMDRPGAAPPCPVLCVGNFTLGGAGKTPTALALVRLLRDLGRTPALLSRGYGGRLAGPLVVDPARHAAAEVGDEPLLLAQAAPTIVARDRPAGARLCAASGADVIVMDDGLQNPSLTKSLSLAVADGGAGLGNGLPFPAGPLRAPLARQWSHVAGLVLVGEGSPGEAAAAEAESRGLPVHRARLVPEAGPDWAGRRVVAFAGIGRPQKFFETLRSLGAEIGAERAFPDHHPYRPKDWAALSALAAREGARLVTTEKDAVRLPAEARTAVAVLRVTLAFADETRLRQQLAAAFPHA
>NZ_LT962688.1|WP_056456273.1|2560296_2561601_+|3-deoxy-D-manno-octulosonic-acid-transferase
MRVPKLPVALRAYRYGLYLGEPAVAGLLAWRSRRGKEDPVRLSERRGLPGRARPVGHLVWMHGASIGEALSLVGLIEGMIARGCSVLVTTGTRSAADLLSKRLPPGAVHQYMPLDAPRWIERFLAHWQPDLAIVAESEIWPNTIVSLHRRGIPLVLVNGRMSERSFKAWTRSPDTARALLARIAVCLVQTREDGERFARLGAPRINVVGNLKYDSAVPPADSQQLAYLGDMIGDRPVWVAASTHAGEDEVVARVHAGLKARFPRLLTVIVPRHPRRGEEAARIATAAGLRVSRRAKGGRPLPSIDLYVADTIGELGLFYRLCPLVFLGGSLVPHGGQNPIEPVRLDSAILHGPHVHNFHEPYGALDTRGGARRVADEAELQKAVGELVADPRALAAMWAKGQAALLPFEGAVARTFAVLEPYVAQMKLSARERD
>NZ_LT962688.1|WP_003606673.1|2559550_2560300_+|lysophospholipid-acyltransferase-family-protein
MGLIKTIGRKPSVQWALSHLASGYLRLVRRTNRFTLEPADAYARLDAFGPFIAAMWHGQHIMISFMSRPQDRVATIISRSPDGNINTMALTRMGVRVMRASGARGRAVKDARAKGGAEGLRAMVKALKGGETVAFSADVPKVSRVCDAGIILLARFSGAPIVPVAVVTSRHIRFNSWDRACLGLPFGRGAMVFGEATFVPREVTPEEVDALRQRVQDELNRVHDRAYTLVGRPDRVGGVSAPASQGSPA
>NZ_LT962688.1|WP_015823242.1|2558365_2559313_-|metallophosphoesterase
MFRLAHLTDPHVGPLPRPRLRQLLSKRAAGYVNWRRGRSRHHDMDLLGALIADLHGQGVDHVACTGDLCNLGLPDEWESARVFLEALGPADRVSFVPGNHDAYVRGSLEGLLAACGGWTEADDGQIRLFPYLRRRGPLALVGLSSAIPTKPFVASGRLGPAQIEAAERVLRDLATAPDRPCRVVMIHHPPHPGGAASGRELKDAAAFAAMIGRAGADLILHGHNHVGTVARITGPDGRPVPVVGAPSASARTLLTNRRASYYLYTVTPGENGFRIAVTERGLDEAGGIGELSGFDIETPPADRIGLVHRRRQRHT
>NZ_LT962688.1|WP_003606671.1|2557873_2558350_+|response-regulator
MIATPTFPDLSALVVDESLYIRRIVRDMLMRVGIKRVLEAPDGAEALGVLAESKPDLTIIDWDLAILSGEEFIRLARTPATSPSPTVPIILMLAQPRRNVVDRAIALGVNEIISKPFSPKTLWSRLDEVINRPRPFSQVKSLLRPLPRANGLSKMGAL
>NZ_LT962688.1|WP_003603953.1|2566966_2567623_-|hypothetical-protein
MPPLRRSSARAVSAARTVRERKDPLEDEARFLRSWFERPLVTGAVTPSGRMLARTMAAYADPNVSGPVIELGPGTGPVTEALIRRGFDQDRLVLVEFNPDFCTLLRRRFPGVTVICGDAYRIRETLRDRLGSLCAATISSLPLFTKPLEQRFELLQGAHDLMHPGAPFVQFTYAVVPPIPAKCEAGSYTASRSNRVWLNLPPARVWVYRRPEPKAGTV
>NZ_LT962688.1|WP_101475779.1|2567781_2568939_-|molecular-chaperone-DnaJ
MSKRDYYEVLGVAKTASESELKVAFRKLAMVHHPDRNPGDKEAEIKFKEVNEAYQCLSDGQKRAAYDRFGHAAFSQGGAGGPGFGNEFGDFMSDIFENFFGDGRAAPGGGAGRGRGGAPGRERGSDLRYNLEISLEEAFAGKTETIRIPTSIACETCSGTGAKAGSKPRTCSTCGGYGRVRAAQGFFAIERTCPNCHGRGEMVDDPCTACSGAGRVNRERTLSINVPAGVDDGLRIRLAGEGESGMRGGPAGDLYVFLSIKPHPFFQRDGADLFCRVPISMVTAALSGEITVPVIDGSQTQVRIPAGTQTGKQFRIKSKGMPVLRSREVGDLYIQVSVETPQNLTKRQRELLQEFDQSASDENHPESAGFFSKVRDFFVSGATRA
>NZ_LT962688.1|WP_157937251.1|2568940_2569330_-|hypothetical-protein
MRSLHQNMILAERNLSEAIKQRDNLRLLLVSGFLGLTTSKPAASHHSCAEAEKGLNEAVAGAVYALNPKAMTVKIDDEKSINLLPEQDALFKWYEDGRSKYASNLSDCEEQVGIKKTERSMPERLPWAN
>NZ_LT962688.1|WP_015823233.1|2569514_2571434_-|molecular-chaperone-DnaK
MGKVIGIDLGTTNSCVAVMEGTQPRVIENAEGARTTPSIVAFTDDGERLVGQPAKRQAVTNPERTFFAIKRLIGRTYDDPLTQKDKGLVPYKIARGDNGDAWVEADGKKYSPSQISAFTLQKMKETAESHLGQPVTQAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKKKAGTIAVYDLGGGTFDVSILEIGDGVFEVKSTNGDTFLGGEDFDNRVVEYLTAEFKKEQGIDLTKDKLALQRLKEAAEKAKIELSSATQTEINLPYITADASGPKHLALKLSRAKFESLVDDLVQRTIEPCRKALKDAGVSASEIDEVVLVGGQTRMPKVQEVVKAFFGKEPHKGVNPDEVVAIGAAVQAGVLQGDVKDVLLLDVTPLSLGIETLGGVFTRLIDRNTTIPTKKSQVFSTAEDNQNAVTIRVFQGEREMAADNKLLGQFDLVGIPPAPRGMPQIEVTFDIDANGIVNVTAKDKATNKEHQIRIQASGGLSDADIEKMVKDAEANAEADKKRRELVEVKNQGESLIHATEKSVAEYGDKVSAADKGAIESAITALRSALEGEDAEGIKAKTNDLMQASMKLGEAMYAASQTEGAPGADGAASTDEKKDDVIDADFQEVDENERKKRA
>NZ_LT962688.1|WP_056500014.1|2571779_2572856_+|hypothetical-protein
MHTAREVAANREADRLMFLPVSERVFAKKPRPLRVATGALLVLAGLAVVPATPARAQNFFEELFGIGRAARPPQPPRNVPVQPPPQPMEPGAPAPGEGAETRPSVPAQPRQPVVLRVPAEDNVVGQDLLLNGLNGSLKIERSGSAYTAQMTLPGTKISQPTENCTVKLDGGKPMPLSAEGRAQGVSRFSTASAECPLRFEILDGSVLATPLGSGAACTFTAADCETTPSGLWGPNAAALLSQAGEFDTARGVADKAVRDNYKIMTQRARGGDVRPIVQEQAAFSSDREQACRTYAREGAHGYCHLRFTEARAIALATRLGANTATPTAANAPARPRRSRAPVEGMNPDAQGAEPFADQ
>NZ_LT962688.1|WP_056118374.1|2576141_2576414_+|hypothetical-protein
MSQETAQHTGAWVVFTQASFVASAALVGFGILFMPLDFWMKGYLAMGTVMLIQSCITATKTLRDVHEGRRMVNRLEDARTERLLMSVGKE
>NZ_LT962688.1|WP_012254285.1|2576497_2576791_+|hypothetical-protein
MDSSDGAHARRQAIIDRLLSDALRPAGGIVLPSHDALPADIRMTVDRLLAKADAERRRSLTYDDLEEALPPRDVTADDLEAIFWVLAEYGIELDEGD
>NZ_LT962688.1|WP_056500009.1|2576787_2578488_-|DNA-repair-protein-RecN
MLVQLAIRDIVLIDKLELTFSGGLTVLTGETGAGKSILLDAFALALGGRGDGGLVRQGEAQGGVTAVFDVALDHPARAVAAAAEIDTDGDLILRRTQFADGRTRAFVNDQPVGVQTMRAIGTALVEIHGQHDDRALADPTTHRSILDAFGGLQGPLAQVASAAKRVRAARSTLAEQRERVEAAQKEADFLRHAVEELGTLDPQAGEEAKLAERRTLMQQGEKVARELNEALDLVGGSGSLVPHLSSAVRRLERRSATVPTLVDPSIAALDAALVALDEARAALDAAVLAAEFDPRELERVEERLFALRAASRKYSVPADDLADLRSRYDADVAALDAGEQALAGLEAELTAAEAAYAQAAKRLGDGRRKAAKALDAAVQAELPPLKLEGARFITQITVDEASRDAAGTERVEFWAQTNPGTRAGPMMKVASGGELSRFMLALKVVLAGKGSAPTLIFDEIDTGLGGAVADAIGARLGRLSEQVQVVAVTHAPQVAARAVTHFRIAKDSVKGKAAKGAEKSADRVTTRVVGLAADARREEIARMLAGATVTDEARAAAARLLLGAEG
>NZ_LT962688.1|WP_056500007.1|2578643_2579630_+|glycosyltransferase-family-2-protein
MRVVAVSRVLDEVDVIEAFIRHAAAFVDHHIILDNGSRDGTVEIIRKLAEEGLPLTVYQSPSICFSERDMNNWLYNEAVDRHDADWVACLDSDEFYDERQLPGGLRNYLKELENAGGNVVAVRVPWAHYNYTTRDDAGENLVPRRITHRTEIASDGKIIASWRLAKEKGVVLEGQHDVHLPEGSHGTVVSERRLWIAHFSERNAAQYVTKFVRGWAKILTAGQACQDRGFSAHYRGPFELLRDHPETLLRSDGFLERKNEDRSVVHDPMDYRGGPLRYTPPNDPEMQSVRALVGFLSEVCSRYGELTDALPVARAYSERIERRINRLI
>NZ_LT962688.1|WP_056500006.1|2579909_2580785_-|outer-membrane-protein-assembly-factor-BamD
MPVTFPTRGAMAAVLLSLGIGLGGCDALDPTNLFAEKYKPEAIPDTPADKLYSEGLAKMEDRDYENAAKQFDQLDKQYTYSDWSRKGLLMTAYANYEGAKYDDAINASKRYLQRHPASKDAAYAQYLMAMSQYKQIPDVTRDQERSERALVALQELVQKYPTSEYAADAKAKIQITRDQLAGKEMEVGRFYLEKRAFPAAINRFRDVVSKYQTTRHAEEALERLVEAYMALGLTGEAQTAAAVLGHNFPDSPWYQDAYKLLQTGGLEPREEKSSWISKIYRGVIGRTAAAE

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_LT962688_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LT962688_4

3041823-3041975

Orphan

Consensus_repeat	Method
GGCAACGACACGATCTACGGTCAGGACGG	PILER-CR

2 spacers

The CRISPR arrays of NZ_LT962688_4

>merge|NZ_LT962688|4|3041823-3041975|PILER-CR
GATCGACGGTCAGGACGGAAACGACACGATCACCGGCGGAAACAACGTCGATTACATCGCCGGCGGGCCGGGTAACGACACGATTTACGGTGGCAACGGATCCGACCAGCTGATTGGCGAGATCGGCAACGACACGATCTACGGTCAGGACGG

>NZ_LT962688|4|1|3041823-3041975|PILER-CR
GATCGACGGTCAGGACGGAAACGACACGA	TCACCGGCGGAAACAACGTCGATTACATCGCCGGCGGGCCGGGTAACGACAC
GATTTACGGTGGCAACGGATCCGACCAGC	TGATTGGCGAGATCGGCAACGACACGATCTACG
GTCAGGACGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LT962688.1\|WP_056504577.1\|3032753_3033179_-\|large-conductance-mechanosensitive-channel-protein-MscL	unknown	unknown	gnl\|CDD\|237569
NZ_LT962688.1\|WP_012253975.1\|3039514_3041047_-\|DEAD/DEAH-box-helicase	unknown	unknown	gnl\|CDD\|223587
NZ_LT962688.1\|WP_101475913.1\|3044467_3046180_+\|heparinase	unknown	unknown	gnl\|CDD\|227658
NZ_LT962688.1\|WP_056504580.1\|3037076_3037721_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293823
NZ_LT962688.1\|WP_012253981.1\|3032456_3032747_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LT962688.1\|WP_003600739.1\|3038390_3038534_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LT962688.1\|WP_056504602.1\|3054682_3057223_-\|PAS-domain-containing-sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_LT962688.1\|WP_015822929.1\|3033619_3034327_+\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|139056
NZ_LT962688.1\|WP_056504597.1\|3050193_3051879_-\|cation-acetate-symporter	unknown	unknown	gnl\|CDD\|236495
NZ_LT962688.1\|WP_003597382.1\|3051875_3052262_-\|DUF485-domain-containing-protein	unknown	unknown	gnl\|CDD\|377315
NZ_LT962688.1\|WP_056504586.1\|3039154_3039340_-\|DUF1508-domain-containing-protein	unknown	unknown	gnl\|CDD\|225956
NZ_LT962688.1\|WP_012253973.1\|3042922_3043159_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LT962688.1\|WP_003600732.1\|3034390_3036838_-\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-B	unknown	unknown	gnl\|CDD\|237860
NZ_LT962688.1\|WP_056504600.1\|3052473_3054423_-\|acetate--CoA-ligase	unknown	unknown	gnl\|CDD\|234677
NZ_LT962688.1\|WP_056504582.1\|3037885_3038305_-\|acyl-CoA-thioesterase	unknown	unknown	gnl\|CDD\|224523
NZ_LT962688.1\|WP_015822925.1\|3043431_3044280_+\|3-mercaptopyruvate-sulfurtransferase	unknown	unknown	gnl\|CDD\|225450
NZ_LT962688.1\|WP_003600741.1\|3038743_3039028_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LT962688.1\|WP_003597384.1\|3048198_3049935_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340927
NZ_LT962688.1\|WP_012253966.1\|3057464_3057941_+\|phasin	unknown	unknown	gnl\|CDD\|131040
NZ_LT962688.1\|WP_056504595.1\|3046387_3047986_+\|bifunctional-phosphoribosylaminoimidazolecarboxamide-formyltransferase/IMP-cyclohydrolase	unknown	unknown	gnl\|CDD\|234854

Protein	Function_ID	Function_description	E-value
NZ_LT962688.1\|WP_056504577.1\|3032753_3033179_-\|large-conductance-mechanosensitive-channel-protein-MscL	gnl\|CDD\|237569	PRK13952, mscL, large conductance mechanosensitive channel protein MscL.	3.25122e-67
NZ_LT962688.1\|WP_012253975.1\|3039514_3041047_-\|DEAD/DEAH-box-helicase	gnl\|CDD\|223587	COG0513, SrmB, Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis].	9.17451e-158
NZ_LT962688.1\|WP_101475913.1\|3044467_3046180_+\|heparinase	gnl\|CDD\|227658	COG5360, COG5360, Uncharacterized protein conserved in bacteria [Function unknown].	8.40008e-157
NZ_LT962688.1\|WP_056504580.1\|3037076_3037721_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293823	cd07737, YcbL-like_MBL-fold, Salmonella enterica serovar typhimurium YcbL and related proteins; MBL-fold metallo hydrolase domain. This subgroup includes Salmonella enterica serovar typhimurium YcbL which has type II hydroxyacylglutathione hydrolase (EC 3.1.2.6, also known as glyoxalase II) activity, and has a single metal ion binding site, and Thermus thermophilus TTHA1623 which does not have GLX2 activity and has two metal ion binding sites with a glyoxalase II-type metal coordination. Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions.	2.52614e-111
NZ_LT962688.1\|WP_015822929.1\|3033619_3034327_+\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|139056	PRK12547, PRK12547, RNA polymerase sigma factor; Provisional.	1.48013e-61
NZ_LT962688.1\|WP_056504602.1\|3054682_3057223_-\|PAS-domain-containing-sensor-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	2.09177e-25
NZ_LT962688.1\|WP_003597382.1\|3051875_3052262_-\|DUF485-domain-containing-protein	gnl\|CDD\|377315	pfam04341, DUF485, Protein of unknown function, DUF485. This family includes several putative integral membrane proteins.	1.12009e-29
NZ_LT962688.1\|WP_056504597.1\|3050193_3051879_-\|cation-acetate-symporter	gnl\|CDD\|236495	PRK09395, actP, cation/acetate symporter ActP.	0
NZ_LT962688.1\|WP_056504586.1\|3039154_3039340_-\|DUF1508-domain-containing-protein	gnl\|CDD\|225956	COG3422, COG3422, Uncharacterized conserved protein [Function unknown].	5.20286e-16
NZ_LT962688.1\|WP_015822925.1\|3043431_3044280_+\|3-mercaptopyruvate-sulfurtransferase	gnl\|CDD\|225450	COG2897, SseA, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism].	4.04832e-105
NZ_LT962688.1\|WP_003600732.1\|3034390_3036838_-\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-B	gnl\|CDD\|237860	PRK14939, gyrB, DNA gyrase subunit B; Provisional.	0
NZ_LT962688.1\|WP_056504600.1\|3052473_3054423_-\|acetate--CoA-ligase	gnl\|CDD\|234677	PRK00174, PRK00174, acetyl-CoA synthetase; Provisional.	0
NZ_LT962688.1\|WP_056504582.1\|3037885_3038305_-\|acyl-CoA-thioesterase	gnl\|CDD\|224523	COG1607, COG1607, Acyl-CoA hydrolase [Lipid metabolism].	2.60857e-55
NZ_LT962688.1\|WP_003597384.1\|3048198_3049935_-\|MFS-transporter	gnl\|CDD\|340927	cd17369, MFS_ShiA_like, Shikimate transporter and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Escherichia coli shikimate transporter (ShiA), inner membrane metabolite transport protein YhjE, and other putative metabolite transporters. ShiA is involved in the uptake of shikimate, an aromatic compound involved in siderophore biosynthesis. It has been suggested that YhjE may mediate the uptake of osmoprotectants. The ShiA-like subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.18413e-114
NZ_LT962688.1\|WP_012253966.1\|3057464_3057941_+\|phasin	gnl\|CDD\|131040	TIGR01985, kDa_protein, phasin. This model represents a family of granule-associate proteins (phasins) which are part of the polyhydroxyalkanoate synthesis machinery. This family is based on a pair of characterized genes from Methylobacterium extorquens. Members of the seed for this model all contain the rest of the components believed to be essential for this system (see the "polyhydroxyalkanoic acid synthesis" property in the GenPropDB). Members of this family score below trusted to another phasin model, TIGR01841 and together may represent a subfamily or broader equivalog.	3.9724e-29
NZ_LT962688.1\|WP_056504595.1\|3046387_3047986_+\|bifunctional-phosphoribosylaminoimidazolecarboxamide-formyltransferase/IMP-cyclohydrolase	gnl\|CDD\|234854	PRK00881, purH, bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional.	0

>NZ_LT962688.1|WP_012253975.1|3039514_3041047_-|DEAD/DEAH-box-helicase
MTQFTDFGLAQPVLRALEEAGYVTPTPIQAQAVPPAMEGRDLCGIAQTGTGKTAAFALPILHRLSLDSRRAPRRGCRVLVLSPTRELASQIADSFSDYGRHLPYTNTVVFGGVNITRQERAIAPGVDILVATPGRLIDLVDRRALTLEGVEILVLDEADQMLDLGFIHALKRIVKMLPAKRQSLFFSATMPKNIAGLADQYLSNPVQVAVTPVATTAERVDQQVIFCHTGAKQALLNHVLRDPKIERVLVFTRTKHGADRVVRGLDKASVVSAAIHGNKSQPQRERALAAFRDGSCRVLVATDIAARGIDVDGVTHVVNYDLPNVPESYVHRIGRTARAGAEGQAISFCNDEERAYLRDIERTTRQKIPVGGFPEGFVPPTRQEAQDNAAEEARRPPRQPQGRPGQRQGRPGGGRGQGGEGRGEPRAHEARGGRPGGQPGHRQDQRAAGAPRPDGQRQDQRRPERAGEARPQGARPQGARPSDGRRDGRPARSGGEGGRAIGWLDRAPRT
>NZ_LT962688.1|WP_056504586.1|3039154_3039340_-|DUF1508-domain-containing-protein
MRYELYRDAGGQWRWRLRVQNGNVIADSGESYVRREDCERGIELVKSSAEASVVDMTTKIA
>NZ_LT962688.1|WP_003600741.1|3038743_3039028_-|hypothetical-protein
MLRKLLLAALMVLGLAAVSPQGASAAPVGPSAALVTETAPATIEKAQYYGGGWGPRRHYGRRFYGPRPFYRRPYYGPRRFYGPRRFYGPRRFYY
>NZ_LT962688.1|WP_003600739.1|3038390_3038534_-|hypothetical-protein
MIDLVTRQRRAIAPPRTLSWQDIPLELFVCAAAIFLAAGLELLGLMP
>NZ_LT962688.1|WP_056504582.1|3037885_3038305_-|acyl-CoA-thioesterase
MTHAIDVSDEHPIGDLTVRTIAMPADTNANGDIFGGWVLSQMDQAGGIAGVERAQGRVVTVAVDAMTFIRPVRVGDVLCVYTRIGRVGRTSMKIHLEAWARRFQTQFREKVTEATFTFVAIDEVGRPRPIPVEGEAAST
>NZ_LT962688.1|WP_056504580.1|3037076_3037721_-|MBL-fold-metallo-hydrolase
MPATPRAAIIPVTPFQQNCTLIWDEATKVGAVVDPGGDLDRIEAAIRAQGVTVEKILLTHGHIDHAGGAAELKERLGVPVEGPHEADKFLLDSLPETGASYGIDGARAITPDRWLNEGETVTVGGLTFDIWHAPGHSPGSVVFMSRDARFALVGDVVFQGSVGRTDLPGGSHEQLIRMIREKVLPLGDDVAFIPGHGPTGTLGQERMTNPFLQG
>NZ_LT962688.1|WP_003600732.1|3034390_3036838_-|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-B
MADSPNTEHADSYGAESIRVLKGLDAVRKRPGMYIGDTDDGSGLHHMIYEVVDNAIDEALAGHADLVTVTLNADGSVTVSDNGRGIPTDIHREEGVSAAEVIMTQLHAGGKFDQNSYKVSGGLHGVGVSVVNALSTSLKLRIWRGGKEHRMEFRHGDAVAPLEVVGPAGDRRGTEVTFLPSTETFTMTEFDYPTLEKRLRELAFLNSGVRIVVTDARHAEHKREELCYEGGVEAFVRYLDRSRKPVDGMTKPVTVLGERDGIRVEVALWWNDSFNETVLPFTNNIPQRDGGTHMAGFRAALTRQLTGYAESSGIAKREKVSLTGDDCREGLTAVISVQVPDPKFSSQTKDKLVSSEVRPAVENILNEGLSTWLEENPAQAKSVMGKVVLAAAAREAARKARETITRKGALDIASLPGKLADCQERDPSKCELLLVEGDSAGGSAKQGRDRTFQAVLPLRGKILNVERVRADRMLSSAEIGTLITALGAGIGRSSTDREGFNPDKLRYHRIIIMTDADVDGSHIRTLLLTFFFRQMPELIERGHLYIAQPPLYKAERGRRVLYLKDERALEDYLIDQGVEGAVLRLASGTEFGGAQLKTLVEEARAFRGILHGLHTRYDRSVVEQSVLAGAFAKDVAENLGEAEVLADRTAKRLDRIADEIEKGWTGAASEGGYVFSRTLRSVTQVANLDATLLASQEARRLAERAETLREIYEEPVTLARKGDETELYGPVGLFEAVMAFGRKGLQLQRYKGLGEMTAQQLWETTLDRDVRSLLQVKVKDTTDADDLFVKLMGDVVEPRREFIQENALSVANLDV
>NZ_LT962688.1|WP_015822929.1|3033619_3034327_+|sigma-70-family-RNA-polymerase-sigma-factor
MPDELIRSELPDDPGSVRVEAVKAVPRQLALALRDYFDLAEQAPLPSPLAALLRQFETALAAHGGEVETIFRDDLVKALPMLRTFAISLTANPTRADDLVQETMVKAWANRERFTPGTNFTAWLFTILRNQFYTEIRKGRREVEDADGVHAGTLTAHPDQEHAAGLRMVMNLIGTLPLPQRQALLLVGAEGFTYEEAAEQLGCQVGTVKSRVSRARAFLVDSFEGLPNGLSAARA
>NZ_LT962688.1|WP_056504577.1|3032753_3033179_-|large-conductance-mechanosensitive-channel-protein-MscL
MLEEFKKFALRGNVVDLAVGVIIGAAFGAIVNSLVQDVIMPIIGAVTGGLDFSNYYIPLSSKVQGGMPYAEAKKVGAVIGYGQFLTLAVNFTIIAFVLFMVIRAMNVLKSREEAKPKPVAEVPADVKLLGEIRDLLAARRV
>NZ_LT962688.1|WP_012253981.1|3032456_3032747_+|hypothetical-protein
MTGSDTSAENLPENPPLPESVRDHLGHELRSVYTEPTPEPRFLGDEPSVPQEFEPQLRRLETRLKTHEEGTEAVEQALDRILDAFGVTPDAGDPKK
>NZ_LT962688.1|WP_012253973.1|3042922_3043159_-|hypothetical-protein
MRETYHIEVLGPEEAGAPGGVQQRISVRMDSLEGAEERARRLFARARVPQRSRTAAEAVRVIDGAGIEVFRMSRFDEG
>NZ_LT962688.1|WP_015822925.1|3043431_3044280_+|3-mercaptopyruvate-sulfurtransferase
MTTSPFVTVEWLHQRLNAPDVVVLDASWYLPAQGRDAAAEYQAAHIPGAIRFDLDAMSDTESALPHMLPRPEVFSSKMRALGVGDGAQVVVYDGMGLFSAPRVRWMLQTFGMREVKILEGGMPAWVAAGYPTEDGEGRPRDRRHFTARLNNGAVADAGDIARALASGTTQVVDARSGPRFRGEEAEPRPGVRPGHMPGAKNLHYAALQANGRLRDEASLRAAIAEAGVDLDRPVVTTCGSGVTAAIVALALETLGKEPRALYDGSWSEWGADPARPVETGPA
>NZ_LT962688.1|WP_101475913.1|3044467_3046180_+|heparinase
MGRGPERLQLYRLLGREIVRAVRERTAQLTARPEILTRARVTGLVIAPHDLRTSDASLADDIYSGLFVFAGRSLVVSGRSPFDYDPPFPEWADALYGFGWLRHLRAADTALARANARAFVSDFMSGRGEAARASPVPVASRRLISFLCQSPLVLEGADHAFYQAFLKAVGKSARELERSLRRSSPPQSRLLAAVALTYAGLCCEGIEPILRRATRILVRELEAQILPDGGHRSRDPRFAMELLLDLLPLRQSFLSRSVDPPEALLRAVDRMLPALRLLRHGDASLSHFNGMGVTAADHLATLLVYDGAGTEPLMYASHSGYARLELGRVVLVCDVGAPPPMDQSREAAAGCLSFELTSGAQRIVVNCGSPASGGELRRAARSTAAHSTATVADTSSCRFLDEPEDWWISRIAARWLLYRRGPVVLRGPGPVAVERRTENGAAVLAARHDGYVTEFGILHERRWRLSDSPVRLAGEDALRRDSKRPRSRPQPVAVRFHLHTAVATQPQDDGSVMLGLPTGERWRFTVEGATAAIEESVYFAGVVGARRTAQIVLHLTVDEDALVRWQIEQV
>NZ_LT962688.1|WP_056504595.1|3046387_3047986_+|bifunctional-phosphoribosylaminoimidazolecarboxamide-formyltransferase/IMP-cyclohydrolase
MPRDQIRVTRALLSVSDKTGLTDFAAALSQRGVELVSTGGTHRALTEAGLAVREVSELTRFPEMMDGRVKTLHPAVHGGLLAVRDNPEHQAALAAHGIGAIDLLVVNLYPFEETLKAGKAYDDCVENIDVGGPAMIRAAAKNHADVAVVVDVSDYGAILAELAEHDGNLTATTRRRLAQKAFSRTASYDAAIANWLAEVEGRDKAPTFKALGGTLAQSLRYGENPHQSAAFYRLPGTLRPGIATARQVQGKELSYNNLNDTDAAYECVAEFDPARTAAVAIIKHANPCGVAEGPDLLAAYEQALACDPTSAFGGIVALNRPLDAEAARKIVEIFTEVIIAPDASEEALAIVGAKKNLRLLLAGGLANPRAKGEVIRTVAGGFLVQGRDALSVDDMDLKVVTKRAPSEAELADMRFAYRVAKHVKSNAIVYAKGGATVGIGAGQMSRVDSSITAARKAAEAAQRLGLSESLAKGSAVASDAFFPFADGLLAAAEAGATAVIQPGGSMRDDEVIRAADEAGLAMVFTGVRHFRH
>NZ_LT962688.1|WP_003597384.1|3048198_3049935_-|MFS-transporter
MAGATAIPRSGDAVRPMTAGEKKVIMASSLGTVFEWYDFYLYGSLAAIIGAQFFSAYPEATRNIFALLAFAAGFLVRPFGALVFGRLGDMVGRKYTFLVTILIMGISTFAVGLLPSYTTLAAYNVGWIAPVTLLALRMLQGLALGGEYGGAAVYVAEHAPAGRRGFYTAFIQTTATLGLLLSLIIILSTQGYVNSAYPATTVTNADGTTTTLTAFQVWGWRIPFLVSVVLLAISVWIRLQMQESPAFKKMKEEGTHSKAPLSEAFGQWKNAKWALLALLGLTAGQAVVWYTGQFYALFFLQSILKVDQFTANIMIAWSLILATGGFLFFGSLSDRIGRKPIILGGCLIAALTYFPLFNMLTAQANPALHAAQANVPVVVKTNKDDCSFQFNPVGTAKFTKECDVAKALLARSAVNYTTENQPAGTPTVVSIKGKDFPVADPNFAKAVPAALTEAGYPSASANPTVIKAANPIDIFTGQKLAVVGILTILVLYVTMVYGPIAAALVELFPTRIRYTSMSLPYHIGNGWFGGLLPATAFAMVAQTGDIYFGLWYPIVIALFTFVIGLIFIPETKDRDILS
>NZ_LT962688.1|WP_056504597.1|3050193_3051879_-|cation-acetate-symporter
MIRLVPLLGAALVGATPAFAAGPDLGAVQQQATNWPAIFMFLFFVLFTLGITYRAAKGSKSAADFYAAGGGISARTNALAIAGDYMSAASFLGISGLVYSSGFDGLIYSTGFLVGWPIVLFLIAERLRNLGKFTFADVASFRLDQTSIRIISATGTLVVVAFYLIAQMVGAGKLIQLLFGLPYLYAVVIVGALMIIYVAFGGMKATTWVQVIKACLLLGGATFMAGAVLYKYGFSPEKLFATAVQTHPKGDAIMAPGGLVSNPIDSLSLGVGLMFGTAGLPHILMRFFTVSDAQAARKSVFYATGLIGYFYILTFIIGFGGIALLMSDPSYFKLGADGTTYDKIKDMVGGTNMVAVNLANAVGGPYFLGFISAVAFATILAVVAGLTLAGASAISHDLYAQVFARGRTTERAEVNLSKASAVGIGIVAIYLGYVFENQNVAFMVGLAFSVAASCNFPVLAMSILWRGTTTWGALIGGLVGLLAAVVMVVLSDAVWVKTFGHPAALFPYANPALFSMPLAFVTIWAVSKIDRTRRADRERAAFDAQFVRSETGIGASGAHAH
>NZ_LT962688.1|WP_003597382.1|3051875_3052262_-|DUF485-domain-containing-protein
MSTIQTVGPSATSDARSLHGAGALDMPEPDHRLDRIAEHPTFKTLVHERTRFGWILTGLMLFVYFGFIGLIAFDKALLATKVGGTGSLGFYMGMFVIVFAFVLTGIYVARANTRYDRLSADLIRSLAK
>NZ_LT962688.1|WP_056504600.1|3052473_3054423_-|acetate--CoA-ligase
MSEKVIDVQDAWRDRALIDEAKYKEMYEASVSDPETFWGEHGRRIDWSTPFSKVKNTSFAPGDVSIKWFEDGKTNVALNCIDRHLATRGDQTAIIWEGDDPNESKHITYRQLHAEVCRMANVLRNRGVGKGDRVTLYLPMIPEAAYAMLACARLGAIHAIVFGGFSPDSLASRIKGCGSKLVITADEGLRGGRKVPLKANVDEAIKRLDKDLVDHVIVVKRTGGNVAMEPGRDVYYHEAAEQVTDECPAEAVEAEHPLFILYTSGSTGQPKGVVHTTGGYLVYASMTHQYVFDYHEGDVYWCTADVGWVTGHSYIVYGPLANGATTLMFEGIPTYPSNSRFWEVIDKHKVNIFYTAPTAIRSLMGGGEGPVKKTSRQSLRVLGSVGEPINPEAWDWYYRVVGDSRCPIVDTWWQTETGGILITPLPGATRLKPGSATLPFFGVQPVMVDAEGKILDGACEGNLCIKDSWPGQMRTVYGDHERFEQTYFSTYKDLYFTGDGARRDADGYYWITGRVDDVINVSGHRMGTAEVESSLVAHPKVSEAAVVGYPHNVKGQGIYAYVTLNEGEEGTDELRKELVTWVRKDIGPIASPDLLQFAPGLPKTRSGKIMRRILRKIAEDDFGSLGDTSTLAEPAVVDDLIENRQNRSA
>NZ_LT962688.1|WP_056504602.1|3054682_3057223_-|PAS-domain-containing-sensor-histidine-kinase
MSDRAVQASYLGDDAAIRDALARWRDDASIAHLVREGSALLVLDEAAERILYAVGAALPLRAGVAGSDGTVLAALRLSEQIRRAGALGARPRMIRLRFDPRGVAPPVVALAARVEIDEGHSVLLLAPIGSLPALRPFDSGPAKADPPPADSGPDVAKSEASSPSPVPSPAPEVETAELPLRVIWRSDADGVLTHVSRTHPDLAEALSGRSWAMLAADGVIEGAALTEALAGRRTFRTLPLLVRGRAFEHALEISGAPAGRSTDDFSGFGGFAILGERHARVMESAVEDEEDGPENLQEEAPVDETEAESGLSVNEHAAFREVARVLGLRFAPDEDGDDAAPMPARAESAPSGSVMPFPIPQGRLSEAETRARLALTELLESLPLGVLVYRGSEMLFASRTFLDLTGYADLPALRQAGLAHLFRGLPPRDREIIGPVPFARPEGGTVALLVDRAGLVWEGAQAEICLARAMPAAGDIQLPAVPANAARLRAEKVLDSLEDGVVTLDAEGRVVGLNPSAAELVHAHPKEVVGGRFADLFAPESLSALETAVTDSRRSGTSEVHGVTVRTGAAALRLRIARLLGEDAPGYCASLREIRDEDVAPPAPVAEVARRSEPEAEGVWKANALARVSREIRPSLNAILGLTDMMLSDRFDRADAERLEAYLREVRLSGGRIAGLIDDLRDLAEIQAGRGKLTFADLALNELVASCIAVQQPQAARDRIVLRTSLAPNLPAMKADERSIRQAALTVLGNAIRVTEAGGQVIVSTTLAEQGEVALRVRDTGTGMTEDELMSALEPFGADLGAVPEEDEKGFGLTLTKALVEANRGRFRISSRKDEGTLVEMLFPAA
>NZ_LT962688.1|WP_012253966.1|3057464_3057941_+|phasin
MTNTPNYEVPTEMRDFAEKSVEQARKAFDSFIGAARRTADTVQGSTDLARSNATSISSRGFEYAEQNVNAAFDLAQKLVRSRDVQEAMQHQAEFVRAQFAAIQAQAKEFGGLAQSAFQQSAENAKSVMQQGAADARQAYEQGVETARENANDAQKSSS

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_LT962688_2	2.1\|666564\|29\|NZ_LT962688\|CRISPRCasFinder	666564-666592	29	CP036421	Rhodobacter sphaeroides strain HJ plasmid unnamed1, complete sequence	2337-2365	4	0.862
NZ_LT962688_2	2.1\|666564\|29\|NZ_LT962688\|CRISPRCasFinder	666564-666592	29	NZ_CP029357	Azospirillum sp. CFH 70021 plasmid unnamed2	227103-227131	5	0.828
NZ_LT962688_2	2.2\|666618\|29\|NZ_LT962688\|CRISPRCasFinder	666618-666646	29	NZ_CP023071	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence	593141-593169	5	0.828
NZ_LT962688_2	2.2\|666618\|29\|NZ_LT962688\|CRISPRCasFinder	666618-666646	29	NZ_CP023071	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence	594077-594105	5	0.828
NZ_LT962688_2	2.2\|666618\|29\|NZ_LT962688\|CRISPRCasFinder	666618-666646	29	NZ_CP023071	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence	595013-595041	5	0.828
NZ_LT962688_2	2.2\|666618\|29\|NZ_LT962688\|CRISPRCasFinder	666618-666646	29	NZ_CP032322	Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence	626184-626212	5	0.828
NZ_LT962688_2	2.2\|666618\|29\|NZ_LT962688\|CRISPRCasFinder	666618-666646	29	NZ_CP026928	Agrobacterium tumefaciens strain 1D1609 plasmid pAt1D1609b, complete sequence	104571-104599	5	0.828
NZ_LT962688_2	2.2\|666618\|29\|NZ_LT962688\|CRISPRCasFinder	666618-666646	29	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	152855-152883	5	0.828
NZ_LT962688_2	2.2\|666618\|29\|NZ_LT962688\|CRISPRCasFinder	666618-666646	29	NZ_CP007794	Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence	506748-506776	5	0.828
NZ_LT962688_2	2.2\|666618\|29\|NZ_LT962688\|CRISPRCasFinder	666618-666646	29	NZ_CP032340	Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence	1428903-1428931	5	0.828
NZ_LT962688_2	2.2\|666618\|29\|NZ_LT962688\|CRISPRCasFinder	666618-666646	29	NZ_CP012915	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence	703470-703498	5	0.828
NZ_LT962688_3	3.1\|2566445\|28\|NZ_LT962688\|CRISPRCasFinder	2566445-2566472	28	NZ_CP032347	Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence	768608-768635	5	0.821
NZ_LT962688_2	2.2\|666618\|29\|NZ_LT962688\|CRISPRCasFinder	666618-666646	29	NC_008042	Ruegeria sp. TM1040 plasmid unnamed, complete sequence	4690-4718	6	0.793
NZ_LT962688_2	2.2\|666618\|29\|NZ_LT962688\|CRISPRCasFinder	666618-666646	29	NZ_CP038235	Leisingera sp. NJS201 plasmid unnamed1, complete sequence	10762-10790	6	0.793
NZ_LT962688_2	2.2\|666618\|29\|NZ_LT962688\|CRISPRCasFinder	666618-666646	29	NZ_CP017947	Bosea sp. Tri-49 plasmid unnamed1, complete sequence	38898-38926	6	0.793
NZ_LT962688_2	2.2\|666618\|29\|NZ_LT962688\|CRISPRCasFinder	666618-666646	29	NZ_CP054022	Rhizobium sp. JKLM12A2 plasmid pPR12A201, complete sequence	774684-774712	6	0.793
NZ_LT962688_2	2.2\|666618\|29\|NZ_LT962688\|CRISPRCasFinder	666618-666646	29	NZ_CP054032	Rhizobium sp. JKLM13E plasmid pPR13E01, complete sequence	444462-444490	6	0.793
NZ_LT962688_2	2.2\|666618\|29\|NZ_LT962688\|CRISPRCasFinder	666618-666646	29	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	560907-560935	6	0.793
NZ_LT962688_2	2.1\|666564\|29\|NZ_LT962688\|CRISPRCasFinder	666564-666592	29	MH371116	Mycobacterium phage DMoney, complete genome	33274-33302	7	0.759
NZ_LT962688_2	2.1\|666564\|29\|NZ_LT962688\|CRISPRCasFinder	666564-666592	29	MH045569	Mycobacterium phage Schiebel, complete genome	33259-33287	7	0.759
NZ_LT962688_2	2.1\|666564\|29\|NZ_LT962688\|CRISPRCasFinder	666564-666592	29	MH371119	Mycobacterium phage OctaviousRex, complete genome	33274-33302	7	0.759
NZ_LT962688_2	2.1\|666564\|29\|NZ_LT962688\|CRISPRCasFinder	666564-666592	29	MF919497	Mycobacterium phage Chance64, complete genome	33274-33302	7	0.759
NZ_LT962688_2	2.1\|666564\|29\|NZ_LT962688\|CRISPRCasFinder	666564-666592	29	MH001456	Mycobacterium phage CLED96, complete genome	33274-33302	7	0.759
NZ_LT962688_2	2.1\|666564\|29\|NZ_LT962688\|CRISPRCasFinder	666564-666592	29	GQ303261	Mycobacterium phage Hope, complete genome	33274-33302	7	0.759
NZ_LT962688_2	2.1\|666564\|29\|NZ_LT962688\|CRISPRCasFinder	666564-666592	29	MG099946	Mycobacterium phage LouisV14, complete genome	35539-35567	7	0.759
NZ_LT962688_2	2.1\|666564\|29\|NZ_LT962688\|CRISPRCasFinder	666564-666592	29	MH779514	Mycobacterium phage Paito, complete genome	33515-33543	7	0.759
NZ_LT962688_2	2.1\|666564\|29\|NZ_LT962688\|CRISPRCasFinder	666564-666592	29	MH779513	Mycobacterium phage Olga, complete genome	33274-33302	7	0.759
NZ_LT962688_2	2.1\|666564\|29\|NZ_LT962688\|CRISPRCasFinder	666564-666592	29	MK919475	Mycobacterium phage Camri, complete genome	33274-33302	7	0.759
NZ_LT962688_2	2.1\|666564\|29\|NZ_LT962688\|CRISPRCasFinder	666564-666592	29	MK310146	Mycobacterium phage Crespo, complete genome	33275-33303	7	0.759
NZ_LT962688_2	2.1\|666564\|29\|NZ_LT962688\|CRISPRCasFinder	666564-666592	29	MK524493	Mycobacterium phage Darionha, complete genome	33274-33302	7	0.759
NZ_LT962688_2	2.1\|666564\|29\|NZ_LT962688\|CRISPRCasFinder	666564-666592	29	MH779505	Mycobacterium phage Grizzly, complete genome	33259-33287	7	0.759
NZ_LT962688_2	2.1\|666564\|29\|NZ_LT962688\|CRISPRCasFinder	666564-666592	29	EU568876	Mycobacterium phage BPs, complete genome	33274-33302	7	0.759
NZ_LT962688_2	2.1\|666564\|29\|NZ_LT962688\|CRISPRCasFinder	666564-666592	29	MF668268	Mycobacterium phage Aroostook, complete genome	33274-33302	7	0.759
NZ_LT962688_2	2.1\|666564\|29\|NZ_LT962688\|CRISPRCasFinder	666564-666592	29	MK524494	Mycobacterium phage Rabbs, complete genome	33462-33490	7	0.759
NZ_LT962688_2	2.1\|666564\|29\|NZ_LT962688\|CRISPRCasFinder	666564-666592	29	KX588251	Mycobacterium phage Jane, complete genome	33274-33302	7	0.759
NZ_LT962688_2	2.1\|666564\|29\|NZ_LT962688\|CRISPRCasFinder	666564-666592	29	MH001455	Mycobacterium phage Remy19, complete genome	33274-33302	7	0.759
NZ_LT962688_2	2.1\|666564\|29\|NZ_LT962688\|CRISPRCasFinder	666564-666592	29	KX641266	Mycobacterium phage Terror, complete genome	32965-32993	7	0.759
NZ_LT962688_2	2.1\|666564\|29\|NZ_LT962688\|CRISPRCasFinder	666564-666592	29	KT355472	Mycobacterium phage Cedasite, complete genome	33274-33302	7	0.759
NZ_LT962688_2	2.1\|666564\|29\|NZ_LT962688\|CRISPRCasFinder	666564-666592	29	KX664455	Mycobacterium phage Zombie, complete genome	33274-33302	7	0.759
NZ_LT962688_2	2.1\|666564\|29\|NZ_LT962688\|CRISPRCasFinder	666564-666592	29	MH077584	Mycobacterium phage Phish, complete genome	33274-33302	7	0.759
NZ_LT962688_2	2.1\|666564\|29\|NZ_LT962688\|CRISPRCasFinder	666564-666592	29	MN444875	Mycobacterium phage Jonghyun, complete genome	33274-33302	7	0.759
NZ_LT962688_2	2.1\|666564\|29\|NZ_LT962688\|CRISPRCasFinder	666564-666592	29	MK433279	Mycobacterium phage Kareem, complete genome	33274-33302	7	0.759
NZ_LT962688_2	2.1\|666564\|29\|NZ_LT962688\|CRISPRCasFinder	666564-666592	29	NC_031102	Mycobacterium phage Sneeze, complete genome	33461-33489	7	0.759
NZ_LT962688_2	2.1\|666564\|29\|NZ_LT962688\|CRISPRCasFinder	666564-666592	29	MK305884	Mycobacterium phage BQuat, complete genome	33265-33293	7	0.759
NZ_LT962688_2	2.1\|666564\|29\|NZ_LT962688\|CRISPRCasFinder	666564-666592	29	MF668272	Mycobacterium phage Gideon, complete genome	33274-33302	7	0.759
NZ_LT962688_2	2.1\|666564\|29\|NZ_LT962688\|CRISPRCasFinder	666564-666592	29	MH779515	Mycobacterium phage Sweets, complete genome	33269-33297	7	0.759
NZ_LT962688_2	2.1\|666564\|29\|NZ_LT962688\|CRISPRCasFinder	666564-666592	29	MW119570	Mycobacterium phage Lang, complete genome	33333-33361	7	0.759
NZ_LT962688_2	2.1\|666564\|29\|NZ_LT962688\|CRISPRCasFinder	666564-666592	29	NC_012788	Mycobacterium phage Angel, complete genome	33259-33287	7	0.759
NZ_LT962688_2	2.1\|666564\|29\|NZ_LT962688\|CRISPRCasFinder	666564-666592	29	KX443326	Mycobacterium phage BruceB, complete genome	33274-33302	7	0.759
NZ_LT962688_2	2.1\|666564\|29\|NZ_LT962688\|CRISPRCasFinder	666564-666592	29	KX641265	Mycobacterium phage Taheera, complete genome	32965-32993	7	0.759
NZ_LT962688_2	2.1\|666564\|29\|NZ_LT962688\|CRISPRCasFinder	666564-666592	29	MK433277	Mycobacterium phage Renaissance, complete genome	33274-33302	7	0.759
NZ_LT962688_2	2.1\|666564\|29\|NZ_LT962688\|CRISPRCasFinder	666564-666592	29	MH590605	Mycobacterium phage Cherrybomb426, complete genome	33274-33302	7	0.759
NZ_LT962688_2	2.1\|666564\|29\|NZ_LT962688\|CRISPRCasFinder	666564-666592	29	MH779509	Mycobacterium phage Kasen3, complete genome	33260-33288	7	0.759
NZ_LT962688_2	2.1\|666564\|29\|NZ_LT962688\|CRISPRCasFinder	666564-666592	29	JN699002	Mycobacterium phage Avrafan, complete genome	33274-33302	7	0.759
NZ_LT962688_2	2.1\|666564\|29\|NZ_LT962688\|CRISPRCasFinder	666564-666592	29	MH779507	Mycobacterium phage Hotshotbaby7, complete genome	33274-33302	7	0.759
NZ_LT962688_2	2.1\|666564\|29\|NZ_LT962688\|CRISPRCasFinder	666564-666592	29	KT355474	Mycobacterium phage Frosty24, complete genome	33274-33302	7	0.759
NZ_LT962688_2	2.1\|666564\|29\|NZ_LT962688\|CRISPRCasFinder	666564-666592	29	MH479920	Mycobacterium phage Mowgli, complete genome	33274-33302	7	0.759
NZ_LT962688_2	2.1\|666564\|29\|NZ_LT962688\|CRISPRCasFinder	666564-666592	29	NC_008202	Mycobacterium phage Halo, complete genome	33269-33297	7	0.759
NZ_LT962688_2	2.1\|666564\|29\|NZ_LT962688\|CRISPRCasFinder	666564-666592	29	KM923970	Mycobacterium phage Gomashi, complete genome	33275-33303	7	0.759
NZ_LT962688_2	2.1\|666564\|29\|NZ_LT962688\|CRISPRCasFinder	666564-666592	29	MH450127	Mycobacterium phage Plagueis, complete genome	33094-33122	7	0.759
NZ_LT962688_2	2.1\|666564\|29\|NZ_LT962688\|CRISPRCasFinder	666564-666592	29	KT347314	Mycobacterium phage Phreak, complete genome	33274-33302	7	0.759
NZ_LT962688_2	2.1\|666564\|29\|NZ_LT962688\|CRISPRCasFinder	666564-666592	29	KT365399	Mycobacterium phage Annihilator, complete genome	33265-33293	7	0.759
NZ_LT962688_2	2.1\|666564\|29\|NZ_LT962688\|CRISPRCasFinder	666564-666592	29	NC_014309	Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome	167590-167618	7	0.759
NZ_LT962688_2	2.1\|666564\|29\|NZ_LT962688\|CRISPRCasFinder	666564-666592	29	NZ_CP052758	Cellulosimicrobium sp. BI34T plasmid pCPRO01, complete sequence	70716-70744	7	0.759
NZ_LT962688_2	2.1\|666564\|29\|NZ_LT962688\|CRISPRCasFinder	666564-666592	29	NZ_CP021767	Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence	166207-166235	7	0.759
NZ_LT962688_2	2.1\|666564\|29\|NZ_LT962688\|CRISPRCasFinder	666564-666592	29	NC_021229	Arthrobacter nicotinovorans pAO1 megaplasmid sequence, strain ATCC 49919	132654-132682	7	0.759
NZ_LT962688_2	2.1\|666564\|29\|NZ_LT962688\|CRISPRCasFinder	666564-666592	29	NZ_CP029777	Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed3, complete sequence	83015-83043	7	0.759
NZ_LT962688_2	2.1\|666564\|29\|NZ_LT962688\|CRISPRCasFinder	666564-666592	29	NC_010625	Paraburkholderia phymatum STM815 plasmid pBPHY01, complete sequence	320406-320434	7	0.759
NZ_LT962688_2	2.2\|666618\|29\|NZ_LT962688\|CRISPRCasFinder	666618-666646	29	NZ_CP032322	Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence	235313-235341	7	0.759
NZ_LT962688_2	2.2\|666618\|29\|NZ_LT962688\|CRISPRCasFinder	666618-666646	29	NZ_CP032322	Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence	273604-273632	7	0.759
NZ_LT962688_2	2.2\|666618\|29\|NZ_LT962688\|CRISPRCasFinder	666618-666646	29	NZ_CP032322	Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence	1286588-1286616	7	0.759
NZ_LT962688_2	2.2\|666618\|29\|NZ_LT962688\|CRISPRCasFinder	666618-666646	29	NZ_CP032322	Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence	1634141-1634169	7	0.759
NZ_LT962688_2	2.2\|666618\|29\|NZ_LT962688\|CRISPRCasFinder	666618-666646	29	NZ_CP007794	Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence	114260-114288	7	0.759
NZ_LT962688_2	2.2\|666618\|29\|NZ_LT962688\|CRISPRCasFinder	666618-666646	29	NZ_CP007794	Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence	851613-851641	7	0.759
NZ_LT962688_2	2.2\|666618\|29\|NZ_LT962688\|CRISPRCasFinder	666618-666646	29	NZ_CP007794	Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence	1414076-1414104	7	0.759
NZ_LT962688_2	2.2\|666618\|29\|NZ_LT962688\|CRISPRCasFinder	666618-666646	29	NZ_CP045395	Roseovarius sp. THAF27 plasmid pTHAF27_b, complete sequence	5247-5275	7	0.759
NZ_LT962688_2	2.2\|666618\|29\|NZ_LT962688\|CRISPRCasFinder	666618-666646	29	NZ_AP014705	Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence	1079322-1079350	7	0.759
NZ_LT962688_2	2.2\|666618\|29\|NZ_LT962688\|CRISPRCasFinder	666618-666646	29	NZ_CP006370	Aureimonas sp. AU20 plasmid pAU20c, complete sequence	112983-113011	7	0.759
NZ_LT962688_3	3.1\|2566445\|28\|NZ_LT962688\|CRISPRCasFinder	2566445-2566472	28	NC_048173	Erwinia phage Derbicus, complete genome	194713-194740	7	0.75
NZ_LT962688_3	3.1\|2566445\|28\|NZ_LT962688\|CRISPRCasFinder	2566445-2566472	28	NC_031007	Erwinia phage vB_EamM_EarlPhillipIV, complete genome	194697-194724	7	0.75
NZ_LT962688_4	4.2\|3041933\|33\|NZ_LT962688\|PILER-CR	3041933-3041965	33	NZ_AP022319	Burkholderia sp. THE68 plasmid BTHE68_p1, complete sequence	1305581-1305613	7	0.788
NZ_LT962688_2	2.2\|666618\|29\|NZ_LT962688\|CRISPRCasFinder	666618-666646	29	NZ_CP022304	Thalassococcus sp. S3 plasmid pS3A, complete sequence	5034-5062	8	0.724
NZ_LT962688_4	4.2\|3041933\|33\|NZ_LT962688\|PILER-CR	3041933-3041965	33	NZ_CP025015	Rhizobium leguminosarum strain Norway plasmid pRLN3, complete sequence	179088-179120	9	0.727
NZ_LT962688_4	4.2\|3041933\|33\|NZ_LT962688\|PILER-CR	3041933-3041965	33	AP014065	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C13-MedDCM-OCT-S36-C38, * SEQUENCING IN PROGRESS *	25618-25650	9	0.727
NZ_LT962688_4	4.2\|3041933\|33\|NZ_LT962688\|PILER-CR	3041933-3041965	33	NZ_CP030762	Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed2, complete sequence	356913-356945	10	0.697
NZ_LT962688_4	4.2\|3041933\|33\|NZ_LT962688\|PILER-CR	3041933-3041965	33	NZ_CP050089	Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b2, complete sequence	199531-199563	10	0.697

1. spacer 2.1|666564|29|NZ_LT962688|CRISPRCasFinder matches to CP036421 (Rhodobacter sphaeroides strain HJ plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.862

acccccgtccagcgcgtcgttcccgtccg	CRISPR spacer
tcccccgtccagcacgtcgttcccggccc	Protospacer
 ************.*********** **

2. spacer 2.1|666564|29|NZ_LT962688|CRISPRCasFinder matches to NZ_CP029357 (Azospirillum sp. CFH 70021 plasmid unnamed2) position: , mismatch: 5, identity: 0.828

acccccgtccagcgcgtcgttcccgtccg	CRISPR spacer
cctgccgtccagcgtgtcgttcccgtccc	Protospacer
 *. **********.*************

3. spacer 2.2|666618|29|NZ_LT962688|CRISPRCasFinder matches to NZ_CP023071 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence) position: , mismatch: 5, identity: 0.828

gccgccgaagagcttgtcgtcgccccagc	CRISPR spacer
gccgcccaagagcgtgtcgtcgccctcgt	Protospacer
****** ****** ***********. *.

4. spacer 2.2|666618|29|NZ_LT962688|CRISPRCasFinder matches to NZ_CP023071 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence) position: , mismatch: 5, identity: 0.828

gccgccgaagagcttgtcgtcgccccagc	CRISPR spacer
gccgcccaagagcgtgtcgtcgccctcgt	Protospacer
****** ****** ***********. *.

5. spacer 2.2|666618|29|NZ_LT962688|CRISPRCasFinder matches to NZ_CP023071 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence) position: , mismatch: 5, identity: 0.828

gccgccgaagagcttgtcgtcgccccagc	CRISPR spacer
gccgcccaagagcgtgtcgtcgccctcgt	Protospacer
****** ****** ***********. *.

6. spacer 2.2|666618|29|NZ_LT962688|CRISPRCasFinder matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 5, identity: 0.828

gccgccgaagagcttgtcgtcgccccagc	CRISPR spacer
cccgccgaacagctggtcgtcgccctggc	Protospacer
 ******** **** **********..**

7. spacer 2.2|666618|29|NZ_LT962688|CRISPRCasFinder matches to NZ_CP026928 (Agrobacterium tumefaciens strain 1D1609 plasmid pAt1D1609b, complete sequence) position: , mismatch: 5, identity: 0.828

gccgccgaagagcttgtcgtcgccccagc	CRISPR spacer
gccgccgatgagcgtgtcgtcgccgacgc	Protospacer
******** **** **********   **

8. spacer 2.2|666618|29|NZ_LT962688|CRISPRCasFinder matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 5, identity: 0.828

gccgccgaagagcttgtcgtcgccccagc	CRISPR spacer
cccgccgaacagctggtcgtcgccctggc	Protospacer
 ******** **** **********..**

9. spacer 2.2|666618|29|NZ_LT962688|CRISPRCasFinder matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 5, identity: 0.828

gccgccgaagagcttgtcgtcgccccagc	CRISPR spacer
cccgccgaacagctggtcgtcgccctggc	Protospacer
 ******** **** **********..**

10. spacer 2.2|666618|29|NZ_LT962688|CRISPRCasFinder matches to NZ_CP032340 (Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence) position: , mismatch: 5, identity: 0.828

gccgccgaagagcttgtcgtcgccccagc	CRISPR spacer
cccgccgaacagctggtcgtcgccctggc	Protospacer
 ******** **** **********..**

11. spacer 2.2|666618|29|NZ_LT962688|CRISPRCasFinder matches to NZ_CP012915 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence) position: , mismatch: 5, identity: 0.828

gccgccgaagagcttgtcgtcgccccagc	CRISPR spacer
cccgccgaacagctggtcgtcgccctggc	Protospacer
 ******** **** **********..**

12. spacer 3.1|2566445|28|NZ_LT962688|CRISPRCasFinder matches to NZ_CP032347 (Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence) position: , mismatch: 5, identity: 0.821

gccccagtggcggcggtgatgcccccaa	CRISPR spacer
gcgacggtggcggcggtgatggccccac	Protospacer
**  *.*************** *****

13. spacer 2.2|666618|29|NZ_LT962688|CRISPRCasFinder matches to NC_008042 (Ruegeria sp. TM1040 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.793

gccgccgaagagcttgtcgtcgccccagc	CRISPR spacer
gccgccgaagagcgtgtcgttgcccgcat	Protospacer
************* ******.****  ..

14. spacer 2.2|666618|29|NZ_LT962688|CRISPRCasFinder matches to NZ_CP038235 (Leisingera sp. NJS201 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.793

gccgccgaagagcttgtcgtcgccccagc	CRISPR spacer
gccgccgaacagcttgtcgttgccgtcgt	Protospacer
********* **********.*** . *.

15. spacer 2.2|666618|29|NZ_LT962688|CRISPRCasFinder matches to NZ_CP017947 (Bosea sp. Tri-49 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.793

gccgccgaagagcttgtcgtcgccccagc	CRISPR spacer
atcgccgaagagcgtgtcgtcgccgatgc	Protospacer
..*********** **********   **

16. spacer 2.2|666618|29|NZ_LT962688|CRISPRCasFinder matches to NZ_CP054022 (Rhizobium sp. JKLM12A2 plasmid pPR12A201, complete sequence) position: , mismatch: 6, identity: 0.793

gccgccgaagagcttgtcgtcgccccagc	CRISPR spacer
atcgccgaagagcgtgtcgtcgccaatgc	Protospacer
..*********** **********   **

17. spacer 2.2|666618|29|NZ_LT962688|CRISPRCasFinder matches to NZ_CP054032 (Rhizobium sp. JKLM13E plasmid pPR13E01, complete sequence) position: , mismatch: 6, identity: 0.793

gccgccgaagagcttgtcgtcgccccagc	CRISPR spacer
atcgccgaagagcgtgtcgtcgccaatgc	Protospacer
..*********** **********   **

18. spacer 2.2|666618|29|NZ_LT962688|CRISPRCasFinder matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 6, identity: 0.793

gccgccgaagagcttgtcgtcgccccagc	CRISPR spacer
cccgccgaacagctggtcgtcgccttggc	Protospacer
 ******** **** *********...**

19. spacer 2.1|666564|29|NZ_LT962688|CRISPRCasFinder matches to MH371116 (Mycobacterium phage DMoney, complete genome) position: , mismatch: 7, identity: 0.759

acccccgtccagcgcgtcgttcccgtccg	CRISPR spacer
caagctgtccagcgcgtcgttcccatcca	Protospacer
    *.******************.***.

20. spacer 2.1|666564|29|NZ_LT962688|CRISPRCasFinder matches to MH045569 (Mycobacterium phage Schiebel, complete genome) position: , mismatch: 7, identity: 0.759

acccccgtccagcgcgtcgttcccgtccg	CRISPR spacer
caagctgtccagcgcgtcgttcccatcca	Protospacer
    *.******************.***.

21. spacer 2.1|666564|29|NZ_LT962688|CRISPRCasFinder matches to MH371119 (Mycobacterium phage OctaviousRex, complete genome) position: , mismatch: 7, identity: 0.759

acccccgtccagcgcgtcgttcccgtccg	CRISPR spacer
caagctgtccagcgcgtcgttcccatcca	Protospacer
    *.******************.***.

22. spacer 2.1|666564|29|NZ_LT962688|CRISPRCasFinder matches to MF919497 (Mycobacterium phage Chance64, complete genome) position: , mismatch: 7, identity: 0.759

acccccgtccagcgcgtcgttcccgtccg	CRISPR spacer
caagctgtccagcgcgtcgttcccatcca	Protospacer
    *.******************.***.

23. spacer 2.1|666564|29|NZ_LT962688|CRISPRCasFinder matches to MH001456 (Mycobacterium phage CLED96, complete genome) position: , mismatch: 7, identity: 0.759

acccccgtccagcgcgtcgttcccgtccg	CRISPR spacer
caagctgtccagcgcgtcgttcccatcca	Protospacer
    *.******************.***.

24. spacer 2.1|666564|29|NZ_LT962688|CRISPRCasFinder matches to GQ303261 (Mycobacterium phage Hope, complete genome) position: , mismatch: 7, identity: 0.759

acccccgtccagcgcgtcgttcccgtccg	CRISPR spacer
caagctgtccagcgcgtcgttcccatcca	Protospacer
    *.******************.***.

25. spacer 2.1|666564|29|NZ_LT962688|CRISPRCasFinder matches to MG099946 (Mycobacterium phage LouisV14, complete genome) position: , mismatch: 7, identity: 0.759

acccccgtccagcgcgtcgttcccgtccg	CRISPR spacer
caagctgtccagcgcgtcgttcccatcca	Protospacer
    *.******************.***.

26. spacer 2.1|666564|29|NZ_LT962688|CRISPRCasFinder matches to MH779514 (Mycobacterium phage Paito, complete genome) position: , mismatch: 7, identity: 0.759

acccccgtccagcgcgtcgttcccgtccg	CRISPR spacer
caggctgtccagcgcgtcgttcccatcca	Protospacer
    *.******************.***.

27. spacer 2.1|666564|29|NZ_LT962688|CRISPRCasFinder matches to MH779513 (Mycobacterium phage Olga, complete genome) position: , mismatch: 7, identity: 0.759

acccccgtccagcgcgtcgttcccgtccg	CRISPR spacer
caagctgtccagcgcgtcgttcccatcca	Protospacer
    *.******************.***.

28. spacer 2.1|666564|29|NZ_LT962688|CRISPRCasFinder matches to MK919475 (Mycobacterium phage Camri, complete genome) position: , mismatch: 7, identity: 0.759

acccccgtccagcgcgtcgttcccgtccg	CRISPR spacer
caagctgtccagcgcgtcgttcccatcca	Protospacer
    *.******************.***.

29. spacer 2.1|666564|29|NZ_LT962688|CRISPRCasFinder matches to MK310146 (Mycobacterium phage Crespo, complete genome) position: , mismatch: 7, identity: 0.759

acccccgtccagcgcgtcgttcccgtccg	CRISPR spacer
caagctgtccagcgcgtcgttcccatcca	Protospacer
    *.******************.***.

30. spacer 2.1|666564|29|NZ_LT962688|CRISPRCasFinder matches to MK524493 (Mycobacterium phage Darionha, complete genome) position: , mismatch: 7, identity: 0.759

acccccgtccagcgcgtcgttcccgtccg	CRISPR spacer
caagctgtccagcgcgtcgttcccatcca	Protospacer
    *.******************.***.

31. spacer 2.1|666564|29|NZ_LT962688|CRISPRCasFinder matches to MH779505 (Mycobacterium phage Grizzly, complete genome) position: , mismatch: 7, identity: 0.759

acccccgtccagcgcgtcgttcccgtccg	CRISPR spacer
caagctgtccagcgcgtcgttcccatcca	Protospacer
    *.******************.***.

32. spacer 2.1|666564|29|NZ_LT962688|CRISPRCasFinder matches to EU568876 (Mycobacterium phage BPs, complete genome) position: , mismatch: 7, identity: 0.759

acccccgtccagcgcgtcgttcccgtccg	CRISPR spacer
caagctgtccagcgcgtcgttcccatcca	Protospacer
    *.******************.***.

33. spacer 2.1|666564|29|NZ_LT962688|CRISPRCasFinder matches to MF668268 (Mycobacterium phage Aroostook, complete genome) position: , mismatch: 7, identity: 0.759

acccccgtccagcgcgtcgttcccgtccg	CRISPR spacer
caagctgtccagcgcgtcgttcccatcca	Protospacer
    *.******************.***.

34. spacer 2.1|666564|29|NZ_LT962688|CRISPRCasFinder matches to MK524494 (Mycobacterium phage Rabbs, complete genome) position: , mismatch: 7, identity: 0.759

acccccgtccagcgcgtcgttcccgtccg	CRISPR spacer
caagctgtccagcgcgtcgttcccatcca	Protospacer
    *.******************.***.

35. spacer 2.1|666564|29|NZ_LT962688|CRISPRCasFinder matches to KX588251 (Mycobacterium phage Jane, complete genome) position: , mismatch: 7, identity: 0.759

acccccgtccagcgcgtcgttcccgtccg	CRISPR spacer
caagctgtccagcgcgtcgttcccatcca	Protospacer
    *.******************.***.

36. spacer 2.1|666564|29|NZ_LT962688|CRISPRCasFinder matches to MH001455 (Mycobacterium phage Remy19, complete genome) position: , mismatch: 7, identity: 0.759

acccccgtccagcgcgtcgttcccgtccg	CRISPR spacer
caagctgtccagcgcgtcgttcccatcca	Protospacer
    *.******************.***.

37. spacer 2.1|666564|29|NZ_LT962688|CRISPRCasFinder matches to KX641266 (Mycobacterium phage Terror, complete genome) position: , mismatch: 7, identity: 0.759

acccccgtccagcgcgtcgttcccgtccg	CRISPR spacer
caagctgtccagcgcgtcgttcccatcca	Protospacer
    *.******************.***.

38. spacer 2.1|666564|29|NZ_LT962688|CRISPRCasFinder matches to KT355472 (Mycobacterium phage Cedasite, complete genome) position: , mismatch: 7, identity: 0.759

acccccgtccagcgcgtcgttcccgtccg	CRISPR spacer
caagctgtccagcgcgtcgttcccatcca	Protospacer
    *.******************.***.

39. spacer 2.1|666564|29|NZ_LT962688|CRISPRCasFinder matches to KX664455 (Mycobacterium phage Zombie, complete genome) position: , mismatch: 7, identity: 0.759

acccccgtccagcgcgtcgttcccgtccg	CRISPR spacer
caagctgtccagcgcgtcgttcccatcca	Protospacer
    *.******************.***.

40. spacer 2.1|666564|29|NZ_LT962688|CRISPRCasFinder matches to MH077584 (Mycobacterium phage Phish, complete genome) position: , mismatch: 7, identity: 0.759

acccccgtccagcgcgtcgttcccgtccg	CRISPR spacer
caagctgtccagcgcgtcgttcccatcca	Protospacer
    *.******************.***.

41. spacer 2.1|666564|29|NZ_LT962688|CRISPRCasFinder matches to MN444875 (Mycobacterium phage Jonghyun, complete genome) position: , mismatch: 7, identity: 0.759

acccccgtccagcgcgtcgttcccgtccg	CRISPR spacer
caagctgtccagcgcgtcgttcccatcca	Protospacer
    *.******************.***.

42. spacer 2.1|666564|29|NZ_LT962688|CRISPRCasFinder matches to MK433279 (Mycobacterium phage Kareem, complete genome) position: , mismatch: 7, identity: 0.759

acccccgtccagcgcgtcgttcccgtccg	CRISPR spacer
caagctgtccagcgcgtcgttcccatcca	Protospacer
    *.******************.***.

43. spacer 2.1|666564|29|NZ_LT962688|CRISPRCasFinder matches to NC_031102 (Mycobacterium phage Sneeze, complete genome) position: , mismatch: 7, identity: 0.759

acccccgtccagcgcgtcgttcccgtccg	CRISPR spacer
caggctgtccagcgcgtcgttcccatcca	Protospacer
    *.******************.***.

44. spacer 2.1|666564|29|NZ_LT962688|CRISPRCasFinder matches to MK305884 (Mycobacterium phage BQuat, complete genome) position: , mismatch: 7, identity: 0.759

acccccgtccagcgcgtcgttcccgtccg	CRISPR spacer
caagctgtccagcgcgtcgttcccatcca	Protospacer
    *.******************.***.

45. spacer 2.1|666564|29|NZ_LT962688|CRISPRCasFinder matches to MF668272 (Mycobacterium phage Gideon, complete genome) position: , mismatch: 7, identity: 0.759

acccccgtccagcgcgtcgttcccgtccg	CRISPR spacer
caagctgtccagcgcgtcgttcccatcca	Protospacer
    *.******************.***.

46. spacer 2.1|666564|29|NZ_LT962688|CRISPRCasFinder matches to MH779515 (Mycobacterium phage Sweets, complete genome) position: , mismatch: 7, identity: 0.759

acccccgtccagcgcgtcgttcccgtccg	CRISPR spacer
caagctgtccagcgcgtcgttcccatcca	Protospacer
    *.******************.***.

47. spacer 2.1|666564|29|NZ_LT962688|CRISPRCasFinder matches to MW119570 (Mycobacterium phage Lang, complete genome) position: , mismatch: 7, identity: 0.759

acccccgtccagcgcgtcgttcccgtccg	CRISPR spacer
caagctgtccagcgcgtcgttcccatcca	Protospacer
    *.******************.***.

48. spacer 2.1|666564|29|NZ_LT962688|CRISPRCasFinder matches to NC_012788 (Mycobacterium phage Angel, complete genome) position: , mismatch: 7, identity: 0.759

acccccgtccagcgcgtcgttcccgtccg	CRISPR spacer
caagctgtccagcgcgtcgttcccatcca	Protospacer
    *.******************.***.

49. spacer 2.1|666564|29|NZ_LT962688|CRISPRCasFinder matches to KX443326 (Mycobacterium phage BruceB, complete genome) position: , mismatch: 7, identity: 0.759

acccccgtccagcgcgtcgttcccgtccg	CRISPR spacer
caagctgtccagcgcgtcgttcccatcca	Protospacer
    *.******************.***.

50. spacer 2.1|666564|29|NZ_LT962688|CRISPRCasFinder matches to KX641265 (Mycobacterium phage Taheera, complete genome) position: , mismatch: 7, identity: 0.759

acccccgtccagcgcgtcgttcccgtccg	CRISPR spacer
caagctgtccagcgcgtcgttcccatcca	Protospacer
    *.******************.***.

51. spacer 2.1|666564|29|NZ_LT962688|CRISPRCasFinder matches to MK433277 (Mycobacterium phage Renaissance, complete genome) position: , mismatch: 7, identity: 0.759

acccccgtccagcgcgtcgttcccgtccg	CRISPR spacer
caagctgtccagcgcgtcgttcccatcca	Protospacer
    *.******************.***.

52. spacer 2.1|666564|29|NZ_LT962688|CRISPRCasFinder matches to MH590605 (Mycobacterium phage Cherrybomb426, complete genome) position: , mismatch: 7, identity: 0.759

acccccgtccagcgcgtcgttcccgtccg	CRISPR spacer
caagctgtccagcgcgtcgttcccatcca	Protospacer
    *.******************.***.

53. spacer 2.1|666564|29|NZ_LT962688|CRISPRCasFinder matches to MH779509 (Mycobacterium phage Kasen3, complete genome) position: , mismatch: 7, identity: 0.759

acccccgtccagcgcgtcgttcccgtccg	CRISPR spacer
caagctgtccagcgcgtcgttcccatcca	Protospacer
    *.******************.***.

54. spacer 2.1|666564|29|NZ_LT962688|CRISPRCasFinder matches to JN699002 (Mycobacterium phage Avrafan, complete genome) position: , mismatch: 7, identity: 0.759

acccccgtccagcgcgtcgttcccgtccg	CRISPR spacer
caagctgtccagcgcgtcgttcccatcca	Protospacer
    *.******************.***.

55. spacer 2.1|666564|29|NZ_LT962688|CRISPRCasFinder matches to MH779507 (Mycobacterium phage Hotshotbaby7, complete genome) position: , mismatch: 7, identity: 0.759

acccccgtccagcgcgtcgttcccgtccg	CRISPR spacer
caagctgtccagcgcgtcgttcccatcca	Protospacer
    *.******************.***.

56. spacer 2.1|666564|29|NZ_LT962688|CRISPRCasFinder matches to KT355474 (Mycobacterium phage Frosty24, complete genome) position: , mismatch: 7, identity: 0.759

acccccgtccagcgcgtcgttcccgtccg	CRISPR spacer
caagctgtccagcgcgtcgttcccatcca	Protospacer
    *.******************.***.

57. spacer 2.1|666564|29|NZ_LT962688|CRISPRCasFinder matches to MH479920 (Mycobacterium phage Mowgli, complete genome) position: , mismatch: 7, identity: 0.759

acccccgtccagcgcgtcgttcccgtccg	CRISPR spacer
caagctgtccagcgcgtcgttcccatcca	Protospacer
    *.******************.***.

58. spacer 2.1|666564|29|NZ_LT962688|CRISPRCasFinder matches to NC_008202 (Mycobacterium phage Halo, complete genome) position: , mismatch: 7, identity: 0.759

acccccgtccagcgcgtcgttcccgtccg	CRISPR spacer
caagctgtccagcgcgtcgttcccatcca	Protospacer
    *.******************.***.

59. spacer 2.1|666564|29|NZ_LT962688|CRISPRCasFinder matches to KM923970 (Mycobacterium phage Gomashi, complete genome) position: , mismatch: 7, identity: 0.759

acccccgtccagcgcgtcgttcccgtccg	CRISPR spacer
caagctgtccagcgcgtcgttcccatcca	Protospacer
    *.******************.***.

60. spacer 2.1|666564|29|NZ_LT962688|CRISPRCasFinder matches to MH450127 (Mycobacterium phage Plagueis, complete genome) position: , mismatch: 7, identity: 0.759

acccccgtccagcgcgtcgttcccgtccg	CRISPR spacer
caagctgtccagcgcgtcgttcccatcca	Protospacer
    *.******************.***.

61. spacer 2.1|666564|29|NZ_LT962688|CRISPRCasFinder matches to KT347314 (Mycobacterium phage Phreak, complete genome) position: , mismatch: 7, identity: 0.759

acccccgtccagcgcgtcgttcccgtccg	CRISPR spacer
caagctgtccagcgcgtcgttcccatcca	Protospacer
    *.******************.***.

62. spacer 2.1|666564|29|NZ_LT962688|CRISPRCasFinder matches to KT365399 (Mycobacterium phage Annihilator, complete genome) position: , mismatch: 7, identity: 0.759

acccccgtccagcgcgtcgttcccgtccg	CRISPR spacer
caagctgtccagcgcgtcgttcccatcca	Protospacer
    *.******************.***.

63. spacer 2.1|666564|29|NZ_LT962688|CRISPRCasFinder matches to NC_014309 (Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome) position: , mismatch: 7, identity: 0.759

acccccgtccagcgcgtcgttcccgtccg	CRISPR spacer
caccctgtccagcgcatcgttcccgcgca	Protospacer
  ***.*********.*********. *.

64. spacer 2.1|666564|29|NZ_LT962688|CRISPRCasFinder matches to NZ_CP052758 (Cellulosimicrobium sp. BI34T plasmid pCPRO01, complete sequence) position: , mismatch: 7, identity: 0.759

acccccgtccagcgcgtcgttcccgtccg	CRISPR spacer
accaccgtccagcgggtcgttccagaaga	Protospacer
*** ********** ******** *   .

65. spacer 2.1|666564|29|NZ_LT962688|CRISPRCasFinder matches to NZ_CP021767 (Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.759

acccccgtccagcgcgtcgttcccgtccg	CRISPR spacer
caccctgtccagcgcatcgttcccgcgca	Protospacer
  ***.*********.*********. *.

66. spacer 2.1|666564|29|NZ_LT962688|CRISPRCasFinder matches to NC_021229 (Arthrobacter nicotinovorans pAO1 megaplasmid sequence, strain ATCC 49919) position: , mismatch: 7, identity: 0.759

acccccgtccagcgcgtcgttcccgtccg	CRISPR spacer
cacaccgaccagctcgtcgttcccgtcac	Protospacer
  * *** ***** *************

67. spacer 2.1|666564|29|NZ_LT962688|CRISPRCasFinder matches to NZ_CP029777 (Deinococcus actinosclerus strain Deinococcus actinosclerus SJTR plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.759

acccccgtccagcgcgtcgttcccgtccg	CRISPR spacer
gtcatcctccagcgcgtcgttcacgtcct	Protospacer
..* .* *************** *****

68. spacer 2.1|666564|29|NZ_LT962688|CRISPRCasFinder matches to NC_010625 (Paraburkholderia phymatum STM815 plasmid pBPHY01, complete sequence) position: , mismatch: 7, identity: 0.759

acccccgtccagcgcgtcgttcccgtccg	CRISPR spacer
aatgccgtccagcgcggcgtccccgtctt	Protospacer
* . ************ ***.******.

69. spacer 2.2|666618|29|NZ_LT962688|CRISPRCasFinder matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.759

gccgccgaagagcttgtcgtcgccccagc	CRISPR spacer
cccgccgaacagcgtgtcgtcgccctcct	Protospacer
 ******** *** ***********.  .

70. spacer 2.2|666618|29|NZ_LT962688|CRISPRCasFinder matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.759

gccgccgaagagcttgtcgtcgccccagc	CRISPR spacer
cccgccgaacagcgtgtcgtcgccctcct	Protospacer
 ******** *** ***********.  .

71. spacer 2.2|666618|29|NZ_LT962688|CRISPRCasFinder matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.759

gccgccgaagagcttgtcgtcgccccagc	CRISPR spacer
cccgccgaacagcgtgtcgtcgccctcct	Protospacer
 ******** *** ***********.  .

72. spacer 2.2|666618|29|NZ_LT962688|CRISPRCasFinder matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.759

gccgccgaagagcttgtcgtcgccccagc	CRISPR spacer
cccgccgaacagcgtgtcgtcgccctcct	Protospacer
 ******** *** ***********.  .

73. spacer 2.2|666618|29|NZ_LT962688|CRISPRCasFinder matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 7, identity: 0.759

gccgccgaagagcttgtcgtcgccccagc	CRISPR spacer
cccgccgaacagcgtgtcgtcgccctcct	Protospacer
 ******** *** ***********.  .

74. spacer 2.2|666618|29|NZ_LT962688|CRISPRCasFinder matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 7, identity: 0.759

gccgccgaagagcttgtcgtcgccccagc	CRISPR spacer
cccgccgaacagcgtgtcgtcgccctcct	Protospacer
 ******** *** ***********.  .

75. spacer 2.2|666618|29|NZ_LT962688|CRISPRCasFinder matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 7, identity: 0.759

gccgccgaagagcttgtcgtcgccccagc	CRISPR spacer
cccgccgaacagcgtgtcgtcgccctcct	Protospacer
 ******** *** ***********.  .

76. spacer 2.2|666618|29|NZ_LT962688|CRISPRCasFinder matches to NZ_CP045395 (Roseovarius sp. THAF27 plasmid pTHAF27_b, complete sequence) position: , mismatch: 7, identity: 0.759

gccgccgaagagcttgtcgtcgccccagc	CRISPR spacer
gccgccgaagagctggtcatcgccaggca	Protospacer
************** ***.*****  .

77. spacer 2.2|666618|29|NZ_LT962688|CRISPRCasFinder matches to NZ_AP014705 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence) position: , mismatch: 7, identity: 0.759

gccgccgaagagcttgtcgtcgccccagc	CRISPR spacer
gccgccgaagggctggtcgtcgcgcacca	Protospacer
**********.*** ******** *

78. spacer 2.2|666618|29|NZ_LT962688|CRISPRCasFinder matches to NZ_CP006370 (Aureimonas sp. AU20 plasmid pAU20c, complete sequence) position: , mismatch: 7, identity: 0.759

gccgccgaagagcttgtcgtcgccccagc	CRISPR spacer
gccgccgaagagcttggcgttgcgcatat	Protospacer
**************** ***.** *  ..

79. spacer 3.1|2566445|28|NZ_LT962688|CRISPRCasFinder matches to NC_048173 (Erwinia phage Derbicus, complete genome) position: , mismatch: 7, identity: 0.75

gccccagtggcggcggtgatgcccccaa	CRISPR spacer
tgttcagtggcggcggtgatgcgccaca	Protospacer
  ..****************** **  *

80. spacer 3.1|2566445|28|NZ_LT962688|CRISPRCasFinder matches to NC_031007 (Erwinia phage vB_EamM_EarlPhillipIV, complete genome) position: , mismatch: 7, identity: 0.75

gccccagtggcggcggtgatgcccccaa	CRISPR spacer
tattcagtggcggcggtgatgcgccaca	Protospacer
  ..****************** **  *

81. spacer 4.2|3041933|33|NZ_LT962688|PILER-CR matches to NZ_AP022319 (Burkholderia sp. THE68 plasmid BTHE68_p1, complete sequence) position: , mismatch: 7, identity: 0.788

ggcaacggatccgaccagctgattggcgagatc	CRISPR spacer
gccctccgatccgaccagcagattcgcgagatt	Protospacer
* *  * ************ **** *******.

82. spacer 2.2|666618|29|NZ_LT962688|CRISPRCasFinder matches to NZ_CP022304 (Thalassococcus sp. S3 plasmid pS3A, complete sequence) position: , mismatch: 8, identity: 0.724

gccgccgaagagcttgtcgtcgccccagc	CRISPR spacer
gccgccgaaaagctggtcgtcgctgatcg	Protospacer
*********.**** ********.

83. spacer 4.2|3041933|33|NZ_LT962688|PILER-CR matches to NZ_CP025015 (Rhizobium leguminosarum strain Norway plasmid pRLN3, complete sequence) position: , mismatch: 9, identity: 0.727

ggcaacggatccgaccagctgattggcgagatc	CRISPR spacer
aacagcggatccgaccagctcattggttgggtg	Protospacer
..**.*************** *****. .*.*

84. spacer 4.2|3041933|33|NZ_LT962688|PILER-CR matches to AP014065 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C13-MedDCM-OCT-S36-C38, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.727

ggcaacggatccgaccagctgattggcgagatc	CRISPR spacer
ttgaagccgtctgaccagctgcttggcgagatc	Protospacer
   **   .**.********* ***********

85. spacer 4.2|3041933|33|NZ_LT962688|PILER-CR matches to NZ_CP030762 (Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.697

ggcaacggatccgaccagctgattggcgagatc	CRISPR spacer
aacagcggatccgaccagctcattggttgggcg	Protospacer
..**.*************** *****. .*..

86. spacer 4.2|3041933|33|NZ_LT962688|PILER-CR matches to NZ_CP050089 (Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b2, complete sequence) position: , mismatch: 10, identity: 0.697

ggcaacggatccgaccagctgattggcgagatc	CRISPR spacer
aacagcggatccgaccagctcattggttgggcg	Protospacer
..**.*************** *****. .*..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

173950 : 185109

Rhizobium_phage(28.57%)

capsid,portal,head,protease

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_101476424.1\|173950_175489_+\|portal	phage portal protein	Q75QM9	Wolbachia_phage	2.5e-109	45.7
WP_101475264.1\|175501_176671_+\|protease	Clp protease ClpP	A0A0A8IKZ4	Aurantimonas_phage	1.1e-48	47.2
WP_101475265.1\|176710_177121_+\|head	head decoration protein	A0A068CDC3	Rhizobium_phage	4.1e-51	76.9
WP_101475266.1\|177148_178198_+\|capsid	major capsid protein	A0A068CC75	Rhizobium_phage	9.9e-150	73.1
WP_101475267.1\|178227_178497_+	hypothetical protein	NA	NA	NA	NA
WP_101475268.1\|178493_178859_+	hypothetical protein	NA	NA	NA	NA
WP_101475269.1\|178855_179521_+	hypothetical protein	NA	NA	NA	NA
WP_101475270.1\|179520_179955_+	hypothetical protein	G8DH50	Emiliania_huxleyi_virus	1.5e-19	38.5
WP_101475271.1\|179980_180922_+	hypothetical protein	G8DH51	Emiliania_huxleyi_virus	7.9e-82	51.9
WP_101475272.1\|180930_181350_+	hypothetical protein	NA	NA	NA	NA
WP_101475273.1\|181415_181601_+	hypothetical protein	NA	NA	NA	NA
WP_101475274.1\|181590_185109_+	hypothetical protein	A5H1M1	Xanthomonas_virus	5.0e-12	40.0

DBSCAN-SWA_2

895852 : 926586

Bacillus_virus(28.57%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_056502436.1\|895852_896764_+\|protease	AprI/Inh family metalloprotease inhibitor	NA	NA	NA	NA
WP_101475447.1\|896833_897586_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
WP_056502438.1\|897640_897889_-	hypothetical protein	NA	NA	NA	NA
WP_056502441.1\|898062_899016_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_101475448.1\|899044_900055_-	2-hydroxyacid dehydrogenase	M1HKI4	Acanthocystis_turfacea_Chlorella_virus	1.6e-64	42.7
WP_056114957.1\|900742_901018_+	hypothetical protein	NA	NA	NA	NA
WP_056114960.1\|901029_902487_+	hypothetical protein	K4HZY1	Acidithiobacillus_phage	5.7e-103	45.4
WP_056114963.1\|902712_903603_-	DNA polymerase III subunit epsilon	M1I9H3	Bacillus_virus	9.7e-05	32.6
WP_157937223.1\|904177_904318_+	hypothetical protein	NA	NA	NA	NA
WP_012253152.1\|905147_906077_-\|transposase	IS110-like element ISMex17 family transposase	Q75QL1	Wolbachia_phage	2.2e-28	33.7
WP_101475450.1\|907195_911503_+	diguanylate cyclase	G3MA91	Bacillus_virus	4.8e-17	32.0
WP_101475451.1\|911926_912940_-\|transposase	IS110-like element ISMdi14B family transposase	NA	NA	NA	NA
WP_101475452.1\|913093_914446_-\|transposase	transposase	NA	NA	NA	NA
WP_101475451.1\|914592_915606_+\|transposase	IS110-like element ISMdi14B family transposase	NA	NA	NA	NA
WP_101475453.1\|916263_917439_+	glutathione-dependent formaldehyde dehydrogenase	NA	NA	NA	NA
WP_101475454.1\|917456_918056_+	hypothetical protein	NA	NA	NA	NA
WP_056151650.1\|918284_918887_+	SRPBCC family protein	NA	NA	NA	NA
WP_101475456.1\|918901_920071_+	glutathione-dependent formaldehyde dehydrogenase	A0A0G2YAX3	Acanthamoeba_polyphaga_mimivirus	1.7e-09	32.1
WP_101475457.1\|920293_920869_+	type 1 glutamine amidotransferase	NA	NA	NA	NA
WP_101475458.1\|920928_921768_+	aldo/keto reductase	NA	NA	NA	NA
WP_157937224.1\|921896_922349_+	hypothetical protein	NA	NA	NA	NA
WP_101475459.1\|923700_926586_-\|protease	ATP-dependent Clp protease ATP-binding subunit	K4FB40	Cronobacter_phage	1.0e-127	40.2

DBSCAN-SWA_3

2948102 : 2970591

Morganella_phage(22.22%)

integrase,protease,capsid,portal,terminase

attL 2961213:2961229|attR 2971158:2971174

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_101475858.1\|2948102_2949287_-\|integrase	tyrosine-type recombinase/integrase	A0A291AUF0	Sinorhizobium_phage	1.0e-89	47.9
WP_101475859.1\|2949283_2949565_-	DNA-binding protein	NA	NA	NA	NA
WP_101475860.1\|2949649_2950399_-	hypothetical protein	NA	NA	NA	NA
WP_101475861.1\|2950395_2950623_-	hypothetical protein	NA	NA	NA	NA
WP_101475862.1\|2950612_2951014_-	hypothetical protein	NA	NA	NA	NA
WP_101475863.1\|2951010_2951307_-	hypothetical protein	NA	NA	NA	NA
WP_101475864.1\|2951303_2951744_-	hypothetical protein	NA	NA	NA	NA
WP_101475865.1\|2951740_2952112_-	hypothetical protein	NA	NA	NA	NA
WP_101475866.1\|2952108_2952345_-	hypothetical protein	NA	NA	NA	NA
WP_101475867.1\|2952346_2952649_-	hypothetical protein	NA	NA	NA	NA
WP_157937254.1\|2952791_2953406_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_101475869.1\|2953491_2953764_+	hypothetical protein	NA	NA	NA	NA
WP_101475871.1\|2953942_2954608_+	hypothetical protein	NA	NA	NA	NA
WP_101475872.1\|2954604_2954904_+	hypothetical protein	NA	NA	NA	NA
WP_157937255.1\|2955125_2955839_+	hypothetical protein	NA	NA	NA	NA
WP_157937256.1\|2956194_2956512_+	hypothetical protein	A0A222ZFR3	Arthrobacter_phage	9.0e-06	35.4
WP_101476465.1\|2957230_2957446_+	hypothetical protein	NA	NA	NA	NA
WP_101476466.1\|2957661_2957991_+	hypothetical protein	NA	NA	NA	NA
WP_157937257.1\|2958085_2958757_+	hypothetical protein	NA	NA	NA	NA
WP_101475876.1\|2958753_2960460_-	AIPR family protein	D0UIM0	Aggregatibacter_phage	1.7e-106	38.8
WP_101475877.1\|2960771_2961059_+	hypothetical protein	NA	NA	NA	NA
WP_101475878.1\|2961055_2961337_+	hypothetical protein	NA	NA	NA	NA
2961213:2961229	attL	NA	NA	NA	NA
WP_101475879.1\|2961422_2962388_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_157937258.1\|2962405_2962627_+	hypothetical protein	NA	NA	NA	NA
WP_101475880.1\|2962811_2963042_+	hypothetical protein	NA	NA	NA	NA
WP_157937259.1\|2963094_2963559_+	hypothetical protein	NA	NA	NA	NA
WP_157937260.1\|2963591_2963954_+	hypothetical protein	Q2NPD2	Xanthomonas_virus	5.9e-09	43.0
WP_157937261.1\|2963975_2964779_-	hypothetical protein	NA	NA	NA	NA
WP_101475882.1\|2964994_2965450_+\|terminase	phage terminase small subunit P27 family	A0A1W6JP17	Morganella_phage	9.0e-15	29.7
WP_101475883.1\|2965465_2967217_+\|terminase	terminase large subunit	A0A0R6PHX7	Moraxella_phage	2.4e-156	48.0
WP_101475884.1\|2967226_2968504_+\|portal	phage portal protein	A0A2K5B287	Erysipelothrix_phage	4.6e-48	34.6
WP_101475885.1\|2968478_2969261_+\|protease	Clp protease ClpP	C7BGG9	Burkholderia_phage	1.6e-51	52.6
WP_101475886.1\|2969337_2970591_+\|capsid	phage major capsid protein	A0A1W6JP20	Morganella_phage	1.0e-52	34.0
2971158:2971174	attR	NA	NA	NA	NA

DBSCAN-SWA_4

4285860 : 4329605

Agrobacterium_phage(14.29%)

head,tRNA,protease,tail,capsid,portal

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_101476155.1\|4285860_4287135_-\|tRNA	CCA tRNA nucleotidyltransferase	A0A2L0UZ92	Agrobacterium_phage	1.4e-36	46.8
WP_012253083.1\|4287131_4287389_-	hypothetical protein	NA	NA	NA	NA
WP_056507274.1\|4287457_4288141_-	CoA pyrophosphatase	NA	NA	NA	NA
WP_056507276.1\|4288137_4288719_-	DUF1285 domain-containing protein	NA	NA	NA	NA
WP_003606720.1\|4288715_4289150_-	PaaI family thioesterase	NA	NA	NA	NA
WP_101476156.1\|4289346_4290357_+	MoxR family ATPase	NA	NA	NA	NA
WP_015822087.1\|4290368_4291283_+	DUF58 domain-containing protein	NA	NA	NA	NA
WP_012253077.1\|4294327_4296418_+	membrane protein	NA	NA	NA	NA
WP_056507279.1\|4296473_4297340_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_056507489.1\|4297509_4298412_+	EamA family transporter	NA	NA	NA	NA
WP_056507286.1\|4301883_4303965_-	methyl-accepting chemotaxis protein	NA	NA	NA	NA
WP_003601905.1\|4305367_4305814_+	hypothetical protein	NA	NA	NA	NA
WP_056507289.1\|4305838_4306120_-	hypothetical protein	NA	NA	NA	NA
WP_101476484.1\|4306300_4306840_+	formaldehyde-activating enzyme	NA	NA	NA	NA
WP_012253071.1\|4306953_4308495_-	class II fumarate hydratase	NA	NA	NA	NA
WP_056507292.1\|4309061_4309664_-	cob(I)yrinic acid a,c-diamide adenosyltransferase	C7F482	Cyanophage	6.5e-05	29.7
WP_056507494.1\|4309663_4310173_-	bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase	NA	NA	NA	NA
WP_056507295.1\|4310275_4310767_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_056507298.1\|4310753_4311176_+	DUF1772 domain-containing protein	NA	NA	NA	NA
WP_003606625.1\|4311460_4311643_+	CbtB-domain containing protein	NA	NA	NA	NA
WP_056507302.1\|4311673_4312441_+	CbtA family protein	NA	NA	NA	NA
WP_056507303.1\|4312433_4312892_+	DUF1636 domain-containing protein	NA	NA	NA	NA
WP_056507306.1\|4312888_4313923_+	cobalamin biosynthesis protein CobW	NA	NA	NA	NA
WP_056507310.1\|4313919_4314816_+	DUF4349 domain-containing protein	NA	NA	NA	NA
WP_056507318.1\|4319557_4320190_+	precorrin-8X methylmutase	NA	NA	NA	NA
WP_003602221.1\|4320189_4320987_+	precorrin-2 C(20)-methyltransferase	NA	NA	NA	NA
WP_056507323.1\|4320983_4321745_+	precorrin-3B C(17)-methyltransferase	NA	NA	NA	NA
WP_101476157.1\|4322169_4322598_+	hypothetical protein	NA	NA	NA	NA
WP_101476485.1\|4322560_4323826_+	DNA-packaging protein	A0A1V0DY66	Dinoroseobacter_phage	2.3e-76	43.5
WP_101476158.1\|4323876_4325049_+\|portal	phage portal protein	W8ECU7	Geobacillus_phage	1.6e-68	41.1
WP_085857022.1\|4325106_4325577_+\|head,protease	HK97 family phage prohead protease	A0A0U2BX10	Paracoccus_phage	3.6e-27	50.0
WP_101476159.1\|4325609_4326875_+\|capsid	phage major capsid protein	U5P0G9	Shigella_phage	9.0e-81	44.4
WP_003606880.1\|4326881_4327730_-\|protease	trypsin-like serine protease	I6WTR7	Cotesia_sesamiae_Mombasa_bracovirus	2.9e-06	23.4
WP_101476160.1\|4327877_4328633_-\|protease	trypsin-like serine protease	NA	NA	NA	NA
WP_101476161.1\|4328666_4329242_+	hypothetical protein	NA	NA	NA	NA
WP_101476162.1\|4329263_4329605_+\|head,tail	head-tail adaptor protein	NA	NA	NA	NA

DBSCAN-SWA_5

5103456 : 5127349

Sinorhizobium_phage(33.33%)

integrase,transposase,terminase

attL 5080314:5080330|attR 5121032:5121048

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
5080314:5080330	attL	NA	NA	NA	NA
WP_101475643.1\|5103456_5104639_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_157937298.1\|5105187_5105583_-	hypothetical protein	NA	NA	NA	NA
WP_157937299.1\|5106272_5106536_-	hypothetical protein	NA	NA	NA	NA
WP_157937300.1\|5106705_5106912_-	DUF2735 domain-containing protein	NA	NA	NA	NA
WP_157937301.1\|5107230_5107473_+	hypothetical protein	NA	NA	NA	NA
WP_101476287.1\|5108556_5109069_+	DUF3280 domain-containing protein	NA	NA	NA	NA
WP_162302485.1\|5109448_5109706_-	hypothetical protein	NA	NA	NA	NA
WP_085856787.1\|5110128_5110422_-	hypothetical protein	NA	NA	NA	NA
WP_085856786.1\|5111679_5112084_-	helix-turn-helix transcriptional regulator	Q8W6G2	Sinorhizobium_phage	1.3e-17	42.1
WP_101476288.1\|5112202_5112886_-	thermonuclease family protein	NA	NA	NA	NA
WP_085857591.1\|5113392_5113602_+	hypothetical protein	NA	NA	NA	NA
WP_157937302.1\|5114699_5114900_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_101476290.1\|5115141_5115741_+	phasin family protein	NA	NA	NA	NA
WP_056153845.1\|5115842_5116091_+	hypothetical protein	NA	NA	NA	NA
WP_085856782.1\|5116293_5116560_-	hypothetical protein	NA	NA	NA	NA
WP_101475643.1\|5116669_5117852_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_157937303.1\|5117884_5118724_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_101475588.1\|5119122_5120474_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_101476292.1\|5120810_5122295_+	ParB N-terminal domain-containing protein	K4HZA5	Acidithiobacillus_phage	1.3e-67	40.0
5121032:5121048	attR	NA	NA	NA	NA
WP_012252533.1\|5122287_5122842_+	hypothetical protein	NA	NA	NA	NA
WP_012252532.1\|5122853_5124311_+\|terminase	phage terminase large subunit	A0A1B1IUW7	uncultured_Mediterranean_phage	3.7e-46	33.0
WP_101476502.1\|5124823_5125042_+	hypothetical protein	NA	NA	NA	NA
WP_082490209.1\|5125219_5126104_+	cobalamin B12-binding domain-containing protein	NA	NA	NA	NA
WP_167397215.1\|5126308_5127349_+\|transposase	IS481 family transposase	NA	NA	NA	NA

DBSCAN-SWA_6

5427010 : 5475956

Wolbachia_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012253152.1\|5427010_5427940_-\|transposase	IS110-like element ISMex17 family transposase	Q75QL1	Wolbachia_phage	2.2e-28	33.7
WP_162302477.1\|5428250_5428436_-	hypothetical protein	NA	NA	NA	NA
WP_101476350.1\|5428546_5429362_-	transglutaminase family protein	NA	NA	NA	NA
WP_101476351.1\|5431309_5431597_-	co-chaperone GroES	A0A221S4A8	uncultured_virus	2.8e-22	51.6
WP_101476352.1\|5432539_5433271_+	PRC-barrel domain-containing protein	NA	NA	NA	NA
WP_101476353.1\|5433441_5434671_+	PAS domain S-box protein	NA	NA	NA	NA
WP_101476354.1\|5434723_5436250_+	AAA family ATPase	NA	NA	NA	NA
WP_101475643.1\|5437763_5438947_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_101476355.1\|5439052_5439250_+	hypothetical protein	NA	NA	NA	NA
WP_101476356.1\|5439253_5440417_+	hypothetical protein	NA	NA	NA	NA
WP_101476357.1\|5441050_5443276_+	TonB-dependent siderophore receptor	NA	NA	NA	NA
WP_101476510.1\|5445293_5447138_-	PAS domain S-box protein	NA	NA	NA	NA
WP_101475643.1\|5447544_5448727_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_012253152.1\|5449468_5450398_-\|transposase	IS110-like element ISMex17 family transposase	Q75QL1	Wolbachia_phage	2.2e-28	33.7
WP_157937310.1\|5450821_5450980_-	hypothetical protein	NA	NA	NA	NA
WP_056115328.1\|5451176_5452901_-	GGDEF domain-containing protein	A0A127AWB9	Bacillus_phage	4.9e-21	37.6
WP_056115325.1\|5453349_5453733_+	SnoaL-like domain-containing protein	NA	NA	NA	NA
WP_056115321.1\|5454317_5458604_+	diguanylate cyclase	G3MA91	Bacillus_virus	1.5e-15	33.5
WP_056115315.1\|5459251_5459530_+	hypothetical protein	NA	NA	NA	NA
WP_167397217.1\|5459684_5460689_-\|transposase	IS481 family transposase	NA	NA	NA	NA
WP_056116627.1\|5460941_5461562_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_056116628.1\|5461608_5462583_-	homocysteine S-methyltransferase family protein	NA	NA	NA	NA
WP_056116630.1\|5462908_5463076_-	hypothetical protein	NA	NA	NA	NA
WP_056116631.1\|5463274_5463607_-	cytochrome c oxidase subunit IV	NA	NA	NA	NA
WP_101476511.1\|5463616_5464300_-	bb3-type cytochrome oxidase subunit IV	NA	NA	NA	NA
WP_056116635.1\|5464373_5465072_-	cytochrome-c oxidase	NA	NA	NA	NA
WP_056116639.1\|5466842_5467682_-	cytochrome c oxidase subunit II	NA	NA	NA	NA
WP_056116653.1\|5467745_5468537_-	DUF2189 domain-containing protein	NA	NA	NA	NA
WP_056116641.1\|5470207_5470393_+	hypothetical protein	NA	NA	NA	NA
WP_082490215.1\|5470863_5471757_+	M23 family metallopeptidase	G9BW84	Planktothrix_phage	1.5e-18	40.9
WP_056116645.1\|5471932_5472406_+	hypothetical protein	NA	NA	NA	NA
WP_056116647.1\|5474393_5475956_+\|transposase	ISL3 family transposase	NA	NA	NA	NA

DBSCAN-SWA_7

5480731 : 5545646

Indivirus(25.0%)

integrase,transposase

attL 5497178:5497194|attR 5543418:5543434

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_101475474.1\|5480731_5481498_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_082499694.1\|5482348_5482591_+	hypothetical protein	NA	NA	NA	NA
WP_056117726.1\|5483323_5483797_+	DUF421 domain-containing protein	NA	NA	NA	NA
WP_056117727.1\|5484155_5485463_+	DUF2254 domain-containing protein	NA	NA	NA	NA
WP_101476359.1\|5487882_5488843_-\|transposase	IS630 family transposase	A0A1V0SCG6	Indivirus	8.8e-12	25.0
WP_101476360.1\|5488913_5489429_-	Spy/CpxP family protein refolding chaperone	NA	NA	NA	NA
WP_101476301.1\|5489805_5490096_-	hypothetical protein	NA	NA	NA	NA
WP_101476363.1\|5490593_5491505_-	porin	NA	NA	NA	NA
WP_056116754.1\|5491917_5492103_+	hypothetical protein	NA	NA	NA	NA
WP_012253152.1\|5492413_5493343_+\|transposase	IS110-like element ISMex17 family transposase	Q75QL1	Wolbachia_phage	2.2e-28	33.7
WP_056117685.1\|5493405_5493891_-	DUF4142 domain-containing protein	NA	NA	NA	NA
WP_101476364.1\|5493902_5494469_-	cytochrome C	NA	NA	NA	NA
WP_101476365.1\|5494519_5497489_-	periplasmic nitrate reductase subunit alpha	NA	NA	NA	NA
5497178:5497194	attL	NA	NA	NA	NA
WP_082490269.1\|5497530_5497839_-	chaperone NapD	NA	NA	NA	NA
WP_056117678.1\|5497848_5498028_-	nitrate reductase	NA	NA	NA	NA
WP_056117676.1\|5498426_5498660_-	hypothetical protein	NA	NA	NA	NA
WP_101476366.1\|5498899_5500033_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_082490267.1\|5500357_5500993_+	hypothetical protein	NA	NA	NA	NA
WP_056117667.1\|5501488_5501779_-	hypothetical protein	NA	NA	NA	NA
WP_101476512.1\|5502859_5503102_+	hypothetical protein	NA	NA	NA	NA
WP_012252228.1\|5504421_5504709_-	hypothetical protein	NA	NA	NA	NA
WP_082490262.1\|5504693_5505299_+	DUF1003 domain-containing protein	NA	NA	NA	NA
WP_012252226.1\|5505754_5505961_+	DUF2934 domain-containing protein	NA	NA	NA	NA
WP_101476367.1\|5505973_5506935_-\|transposase	IS630 family transposase	A0A1V0SCG6	Indivirus	5.2e-12	24.1
WP_056117656.1\|5507496_5508723_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_162302486.1\|5509312_5509525_-	DUF4113 domain-containing protein	NA	NA	NA	NA
WP_056117654.1\|5509457_5510021_-	OsmC family protein	NA	NA	NA	NA
WP_056117652.1\|5510177_5511104_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_056117648.1\|5511562_5511973_-	hypothetical protein	NA	NA	NA	NA
WP_056117646.1\|5512256_5512589_+	hypothetical protein	NA	NA	NA	NA
WP_056117645.1\|5512896_5513133_+	hypothetical protein	NA	NA	NA	NA
WP_082490259.1\|5514325_5514595_+	DUF1488 family protein	NA	NA	NA	NA
WP_056116659.1\|5516113_5516323_+	cold-shock protein	A0A1W6JNX5	Morganella_phage	1.0e-10	56.9
WP_015821265.1\|5518643_5518880_-	hypothetical protein	NA	NA	NA	NA
WP_082490219.1\|5519685_5519955_+	hypothetical protein	NA	NA	NA	NA
WP_082490220.1\|5520037_5521366_-	hypothetical protein	NA	NA	NA	NA
WP_056116662.1\|5521362_5522349_-	DUF2955 domain-containing protein	NA	NA	NA	NA
WP_012252260.1\|5522750_5523182_+	ribonuclease HI	M4QQT8	Vibrio_phage	5.3e-25	43.4
WP_157937312.1\|5523376_5523844_+	hypothetical protein	NA	NA	NA	NA
WP_157937313.1\|5524367_5524610_+	hypothetical protein	NA	NA	NA	NA
WP_056116666.1\|5524789_5525407_+	MerR family transcriptional regulator	NA	NA	NA	NA
WP_056116674.1\|5527004_5528033_+\|transposase	IS110-like element ISMmg1 family transposase	NA	NA	NA	NA
WP_157937314.1\|5529204_5531487_+	hypothetical protein	NA	NA	NA	NA
WP_157937315.1\|5531737_5532058_+	hypothetical protein	NA	NA	NA	NA
WP_157937316.1\|5532134_5533268_+\|integrase	tyrosine-type recombinase/integrase	A0A2H4JCB7	uncultured_Caudovirales_phage	7.7e-07	25.0
WP_056116681.1\|5533673_5534381_+	hypothetical protein	NA	NA	NA	NA
WP_155773703.1\|5536335_5536707_-	hypothetical protein	NA	NA	NA	NA
WP_056116685.1\|5537735_5538341_+	phasin family protein	NA	NA	NA	NA
WP_056119651.1\|5540353_5540581_+	hypothetical protein	NA	NA	NA	NA
WP_101476369.1\|5540674_5540917_-	hypothetical protein	NA	NA	NA	NA
WP_056117733.1\|5541779_5542133_+	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA
WP_101476370.1\|5542340_5543012_-	recombinase family protein	A0A0F7L6S1	uncultured_marine_virus	2.8e-28	47.8
WP_012253152.1\|5544716_5545646_+\|transposase	IS110-like element ISMex17 family transposase	Q75QL1	Wolbachia_phage	2.2e-28	33.7
5543418:5543434	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_LT962688

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection