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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_LT907975 Pseudodesulfovibrio profundus strain 500-1 chromosome DPRO 0 crisprs cas3,RT,csa3,TnsE_C,DinG,WYL,DEDDh,cas2,cas3HD 0 0 25 0
NZ_LT907976 Pseudodesulfovibrio profundus strain 500-1 plasmid paDPRO, complete sequence 0 crisprs c2c9_V-U4 0 0 0 0
NZ_LT907977 Pseudodesulfovibrio profundus strain 500-1 plasmid pbDPRO, complete sequence 0 crisprs NA 0 0 0 0

Results visualization

1. NZ_LT907975
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 38300 : 124026 77 Ralstonia_phage(20.0%) integrase,transposase attL 58571:58587|attR 123335:124045
DBSCAN-SWA_2 276933 : 328815 40 Ralstonia_phage(15.38%) protease,transposase NA
DBSCAN-SWA_3 370760 : 378618 7 Abalone_shriveling_syndrome-associated_virus(16.67%) NA NA
DBSCAN-SWA_4 432516 : 492819 60 Acidithiobacillus_phage(33.33%) capsid,integrase,transposase,portal attL 481657:481674|attR 499105:499122
DBSCAN-SWA_5 499965 : 550775 43 Bacillus_phage(18.75%) transposase,plate,tail NA
DBSCAN-SWA_6 572376 : 611109 41 Bacillus_phage(20.0%) capsid,portal,integrase,plate,tail attL 562943:562960|attR 589569:589586
DBSCAN-SWA_7 638836 : 689406 46 Shigella_phage(18.18%) transposase NA
DBSCAN-SWA_8 885267 : 945125 58 uncultured_Mediterranean_phage(14.29%) tRNA,protease,transposase NA
DBSCAN-SWA_9 950807 : 998657 35 Enterobacteria_phage(33.33%) tRNA,transposase NA
DBSCAN-SWA_10 1033701 : 1091219 52 Enterobacteria_phage(25.0%) integrase,transposase attL 1040736:1040752|attR 1075466:1075482
DBSCAN-SWA_11 1108707 : 1224253 104 Ralstonia_phage(13.79%) holin,integrase,transposase attL 1173712:1173726|attR 1203853:1203867
DBSCAN-SWA_12 1259052 : 1374354 100 Enterobacteria_phage(14.29%) tRNA,integrase,transposase attL 1344911:1344925|attR 1378325:1378339
DBSCAN-SWA_13 1569741 : 1683935 105 Halovirus(13.33%) tRNA,protease,integrase,transposase attL 1625900:1625916|attR 1683477:1683493
DBSCAN-SWA_14 1813255 : 1863995 46 Ralstonia_phage(16.67%) transposase NA
DBSCAN-SWA_15 1883217 : 1954727 60 Bacillus_virus(13.33%) transposase NA
DBSCAN-SWA_16 1996599 : 2004908 8 Methanothermobacter_phage(16.67%) NA NA
DBSCAN-SWA_17 2046111 : 2072314 22 Enterobacteria_phage(22.22%) transposase NA
DBSCAN-SWA_18 2104832 : 2215477 94 Bacillus_phage(26.09%) tRNA,integrase,transposase attL 2121202:2121225|attR 2138732:2138755
DBSCAN-SWA_19 2337893 : 2403464 59 Hokovirus(21.43%) transposase NA
DBSCAN-SWA_20 2963813 : 3024852 56 Bacillus_phage(13.33%) protease,integrase,transposase attL 2997834:2997849|attR 3024363:3024378
DBSCAN-SWA_21 3333399 : 3398365 56 Wolbachia_phage(10.0%) tRNA,integrase,transposase attL 3340442:3340501|attR 3399253:3400520
DBSCAN-SWA_22 3664366 : 3740699 58 Streptococcus_phage(27.27%) protease,integrase,transposase attL 3698297:3698311|attR 3743318:3743332
DBSCAN-SWA_23 3747728 : 3795762 53 Pseudomonas_phage(33.33%) transposase,capsid,terminase,portal,integrase,head,plate,tail attL 3778406:3778465|attR 3795758:3796969
DBSCAN-SWA_24 3814125 : 3851384 53 Vibrio_phage(11.11%) transposase,protease,tRNA,holin,integrase attL 3826256:3826270|attR 3833622:3833636
DBSCAN-SWA_25 3872186 : 3904649 28 Ralstonia_phage(36.36%) tRNA,protease,integrase,transposase attL 3872132:3872191|attR 3889989:3891259
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage