Overview of predicted results
Overview of the results
| Contig_ID | Contig_def | CRISPR array number | Contig Signature genes | Self targeting spacer number | Target MGE spacer number | Prophage number | Anti-CRISPR protein number |
|---|---|---|---|---|---|---|---|
| NZ_LT670851 | Candidatus Erwinia haradaeae strain ErCipseudotaxifoliae isolate 3056 chromosome 1 | 1 crisprs | DEDDh,cas3 | 0 | 0 | 0 | 0 |
| NZ_LT670852 | Candidatus Erwinia haradaeae strain ErCipseudotaxifoliae isolate 3056 plasmid pl1 | 0 crisprs | NA | 0 | 0 | 0 | 0 |
1. NZ_LT670851
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0
| CRISPR_ID | CRISPR_location | CRISPR_type | Repeat_type | Spacer_info | Cas_protein_info | CRISPR-Cas_info | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NZ_LT670851_1 | 612168-612280 | Orphan |
NA
Consensus repeat of NZ_LT670851_1
|
1 spacers
spacers of NZ_LT670851_1
>1.1|612196|57|NZ_LT670851|CRISPRCasFinder CTAGTAATGATTAAATACTTCATAGACCTCATGATACCGCATACCATTATCAGAGTA |
CRISPR arrays and Neighbor proteins around NZ_LT670851_1
The CRISPR arrays of NZ_LT670851_1 >merge|NZ_LT670851|1|612168-612280|CRISPRCasFinder ACACTAACAGTATATAACAAGCTACATACTAGTAATGATTAAATACTTCATAGACCTCATGATACCGCATACCATTATCAGAGTAACACTAACAGTATATAACAAGCTACATA >NZ_LT670851|1|1|612168-612280|CRISPRCasFinder ACACTAACAGTATATAACAAGCTACATA CTAGTAATGATTAAATACTTCATAGACCTCATGATACCGCATACCATTATCAGAGTA ACACTAACAGTATATAACAAGCTACATA
>NZ_LT670851.1|WP_072666280.1|611127_612048_+|D-alanine--D-alanine-ligase MAGKVAVLMGGCSSEREISLLSGQAVLHGLKGIGVNAYPVDTRDFPIVQLKQEGFIKAFITLHGQGGEDGTIQAVLEHLKIPYTGSRVLASALSIDKIQSKYLWKGYGLSTSPFISLHQSQINGGLSQKIKRKLSQLGLPVFVKPNCSGSSLGVSRVNYISDLEPALINAFRYDKKILIEAFLSGDEYTVGVIGTTVLPSLRIQCSREFYNYHAKYISRDTKYFCPSGLSIQQEEDLKSLSLAAWNALGCAGCGRIDVMADSAGRFYLLEVNTSPGMSNHSLLPMAASKAGISFSELVGRILDLAN >NZ_LT670851.1|WP_072666279.1|609644_611090_+|UDP-N-acetylmuramate--L-alanine-ligase MVNAKPVDIVGLITSKMRCLRHFHFVGIGGSGMGGIATILAQEGYIVSGSELSPNAITQYLKTLGVIIFAHHCPENIKNAHVLVISSAISQDNPEVVAAHKANIPVILRAEMLSELMRSRYGITVSGTHGKTTTTAMIACIYQEGGLDPTFINGGMIKGIRANARLGKSCYLVVEADESDASFLYLQPILAVITNIEADHMDTYQGNFNTLKQTFIKFLHNLPFYGRAILCVDDEAIRSIIPQIKRKIITYGCRKNADVQIQNYQHHKGKGCFHLIRQNKPLIKVTLNTPGLHHALNAAAAIAVATEDGIADADIICALQNFQGVSRRFDILGEYPLARVNGSKGTAILIDDYGHHPTEIDVTIKTIRARWPDRNLIMIFQPHRYTRTRDLHSDFINTLSQVDELIMLEVYSAGELPISGADSNSLCRAIQDRQKINPILISNHDRIIDNLLPRLTGNNLILVQGAGNIETVACDIAKALL >NZ_LT670851.1|WP_072666278.1|607314_608466_+|cell-division-protein-FtsW MVILKNHERNILLLYDRTLLWLTLGLTIIGLIMVTSASIAVSQRLVEDPLLFAKRDALYLLLSLGVSRITLCIPMSVWQRFSGSMLLMAIALLFLVLVTGNSINGAIRWISLGPVSIQPAELSKLSLFCYLSNYLARKVHEVRNYFWGFLKPMGVMLILAVLLLAQPDLGTVVVLFITTLSVLFLGGAKVWQFVAIISSGIVAISILILSEPYRIRRIISVWNPWSDPFGSGYQLTQSLMAFARGEFLGQGLGNSIQKLEYLPEAHTDFIFSIIGEELGYLGVFIGLIMLFFVSFRAMLIGRDALKINQCFSGFLACAIGVWFSLQTLVNVGATAGVLPTKGLTLPLISYGGSSLLIMSTAIVFLLRIDYEIRLTKTQALKRG >NZ_LT670851.1|WP_072666524.1|605941_607258_+|UDP-N-acetylmuramoyl-L-alanine--D-glutamate-ligase MNNYTGTKVVIIGLGLTGSACVDFFLTRGVIPRVIDTRIKPPLLYSLPENVEYWLGEINHSWLMNSDLIIISPGISPLQPSLMMAAHAGIEIISEIELFCRETQTPIVAITGSNGKSTVTSWLGGMARSMGWMVGIGGNIGVPALRLLNQPAQLYILELSSFQLETTYSLQAVAATILNVSEDHMDRYPLGMQQYCSAKLRIYKNATLCLVNADDANTIPVWNAHACYRSFGVYTGDYHFKNQNNSTWLQALGESVLNINEMRITGKHNFTNALSVLALADALHIPRGISLSSLTSFTGLEHRFQIIHQKNGVQWINDSKSTNVGSTTAALHNLEPDGTLWLLLGGDSKSADLTPLSEPLQKKDLRLYCFGRDRDKFAKLRPEITVQTETMIEAMLEIASKVQPGDIVLLAPACSSLDQFTNFEERGALFTKIAREVG >NZ_LT670851.1|WP_072666277.1|604856_605939_+|phospho-N-acetylmuramoyl-pentapeptide--transferase MLVLLEEHLVMLYSGFSAFSDLIVRAICSFFTSLVVSWWIGPYVIAYLKRLSYGQVVRMDGPRTHFSKSGTPTMGGIIILVAIILSVFIWANPCNIYVWFVMFTLVSYGIVGCVDDYKKIVHNDTIGLPARWKYTWQSAIALLVAIAMYIIGKETYTTFLVLPFVQSMVPQLGLFYLLMTYFVIVGTSNAVNITDGLDGLAIVPAVFTAIGLALVAFATGNEKYAAYLHVPYLENASELVIICTAMCGAGLGFLWFNTYPARIFMGDIGSLALGSALGVIAILLRQEFLLLIMGGVFFIETVSVILQVGYFKWRGQRIFCMAPIHHHYELNGYPEPRIIVRCWIISLVLLLISLLTLKMR >NZ_LT670851.1|WP_072666276.1|603501_604863_+|UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D--alanine-ligase MIPITLQRVADITGGVLYGADTTISSISTDTRQMRTGSFFIALKGKHYDAHDFIQSAIDAGCAGLLISKSLHFKIPCVVVKNTRIALGDLAAWVRQQSNARVVAITGSAGKTSVKDMTAAILRHCGETLFTSGTLNNDIGVPITLLALHLRHRYVVLELGASHVGEIAYTVQLTQPESVLINNLSPAHLEGFGSLSGIAKAKGEILDHLPLHGTAIINNDSHDLANWKHVLKDRTIWRFSIHKINKSDFYASDIAYSKSGAVFNLHSPKGSIGIALPLHGEHQIANALAASALALSVGAPLNAIAMGLYHIKAIPGRLFPIYFSKYKLLIDDSYNANMGSMIAAIKVLSERPGYRVMIVGDMAEMGNDAILYHTQIGRLIHGAGINKVLSIGSLGMLIARESTVGECFKEHLSLGKRAYELLTQHQPITLLVKGSRSSSMDKIVNILQEKGVC >NZ_LT670851.1|WP_072666275.1|602014_603505_+|UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,-6-diaminopimelate-ligase MLYRNLKTLLAPWVPDVPHCLLREMTLDSRKVVSGDLFVAINGHIADGRGFIAEAISQGASAVIAEAKGHANHGEIQYVLGIPVVYLENLSQSLSKIAGCFYQNPGTQLKLIGVTGTNGKTTVTHLLAQWVQLLGDVSAIMGTLGNGLYGRLALTNNTTDSAIKVQNTLYSLVKQGVHLVSMEISSHALAQDRVADLPFSAAVFTNLSRDHLDYHRDMNCYEHSKWQLFSKYQIKQLIINADDIIGQRWLKKLPNAVYVTADYTNYCHLHQRWLRAKKVTYGNSGTSITFSSSWGSGYIETDLIGSFNVSNLLLSLATLLSLEYPLEVLMRTARQLHPVTGRMEIFRFIEKPTVVIDYAHTPCALEKALIETRRYCKKGRLWCIFGCGGDRDLGKRPIMGRIAEHLADFVVITNDNPRNEDPRMIINDILSGFLYPETADVIIDRVQAVTYAIEQAQIDDAVLIAGKGSEKYQTFGKDNVSYSDQKIALALLRQPK >NZ_LT670851.1|WP_072666274.1|600251_602015_+|peptidoglycan-glycosyltransferase-FtsI MKRVKYIYNQRLKKIGQQSSFSYWRFTLLCSFIFFGTIGLLFRLAWLQLIYPERLVHEGDMRSLRIQVIPTSRGMITDRKGRPLAVSIPVYAILADPKELQRQGGIILDDHWKALANVLSISINKLKERINANPSSRFVYLARQVDPEISEYIQRLKLPGIFLRNESRRYYPSGEVTSHLIGVTNIDGEGIEGIEKSFNKWLTGQPGSRIVRQDRLGQVIEDIPLVDCQESSNLTLSIDVGLQTQVYHELHKAVSFHRAESGTAVLLDIHTGEVLAMVNSPSYNPNNLNGVSQDVMRNRAITDMFEPGSTVKPMVVLSALQSRVASEHSILNTEPLRINGHTVRDVTLYHELTLTGVLQKSSNVGVTRLALSMPSHVLVDTYSSFGLGKTTSLGLIGESRGFCPQKKRWSNIERAAFSFGYGLMVTPLQLARVYATFGSYGIYRPLSIMKVSTPIEGKRIFPDQTVRTVLHMMESVSLPGGCGIKAAVKDYRVAIKTGTVKKVGKNGKFINRYIAYTAGVAPASNPRFALVVVVNDPQSGQYYGGAVSAPVFSSIMTEVLHTMKVQPDAVSNFSVQKLNNLEKMRSE >NZ_LT670851.1|WP_072666273.1|596953_597739_+|zinc-ABC-transporter-permease-subunit-ZnuB MIELLLPGWLTGVLLAFIAGPLGSFIIWRRMSYFGDTLAHTSLLGIALGLFLDINPCYTVIIVTLFLSIILVWLERYPHLGLDTLLGILAHSTLSLGLVLVSLMSNVRIDLIAYLFGDLLSVMPNDLWVITIGVILVLLVLILNWRKFLSLTVHPELAQVDGINIQSTKMILMIITALTIGISMKFVGALIITSLLIMPAAIARRFAQSPEEMALFAVLIGALAVTSGLGFSAFYDTPAGPSVVLVLTFLFILSIIKKPGI >NZ_LT670851.1|WP_072666523.1|596198_596918_+|zinc-ABC-transporter-ATP-binding-protein-ZnuC MSTLISIKEVTVKLGQCLALTNISLNLESGRILTLVGPNGAGKSTLVRIVLGLIRPTFGSVYRLSKLSIGYVPQKMLLDVTLPLSVGRFMRLRPNVKYIDIIPALRRVQAEHLIAFPLQKLSGGEMQRVLLARALLSQPKLLVLDEPTQGVDINSQIALYDLIDQLRHDFNCGVLMVSHDLHFVMAKTDEVLCLNRHICCSGTAESVSQHPEFISMFGPVRAKKLAFYRHKNDKNNHDL >NZ_LT670851.1|WP_072666281.1|613036_614293_+|cell-division-protein-FtsA MIKLIDKKLLVGLEIGTTKIVTIVGEVLPDGIINIIGIGESLSRGMDKGGVTNLELVVKCVKKAIDQAELMADCQIESVYLALSGQHISCQNEIGIVPISEEEVTQEDVDTVVHTAQSVRVRDEHRILHVIPQEYAIDYQEGIKNPVGLSGVRLKAKVHLITCHNDMAKNIVKVVARCGLKVDQLIFAGLASSLAVLTEDEKELGVCMVDIGGGTMDIGIYTNGALRYSKVIPYAGHIVTSDIAYAFGTPPADAEDIKLRKGCALGTLTVQDEAVEVPSVGGRLPQNLQLKTLTEIIELRYTELLHLVNDEIVQFQNSLSQSNAKYHLAAGVVLTGGASQINGLVECAQSVFHTQVRIGHPIYISDSIKTMQGPSYSTVAGLLHYGKEDRINNKKAMKHRASVSLWLTKINRWLKKEF >NZ_LT670851.1|WP_072666282.1|614365_615541_+|cell-division-protein-FtsZ MFEPLELTNDAIIKVIGVGGGGGNAVEHMIRESISGVEFFAINTDAQALRKTTISQTIQIGNAITKGLGAGANPEIGRNAAEEDREVLRQILTDTDMVFIAAGMGGGTGTGAAPVVAKVAKEFGILTVAVVTKPFNFEGKKRMSFAEQGITELSKYVDSLITIPNDKLLKVLGRGVSLLDAFGAANDVLKGSVQGIAELITRPGLINVDFADVRTVMSEMGYAMMGSGIACGEDRAEEASEMAVSSPLLEDIDLSGARGVLVNITAGFDLRLDEFETIGNTIRAFSSDSATVVIGTSLDPEMHDTLRVTVVATGIGVSRRPDIAVVTDKKSIHHAMIDDRYQQHGLPSMTLESEPIVRTAHEQETKLSQPSNYLDIPAFLRKKSEYKDSND >NZ_LT670851.1|WP_072666283.1|615633_616551_+|UDP-3-O-acyl-N-acetylglucosamine-deacetylase MIKQRTLKRTVQTTGVGLHTGKRITLTLRCALANTGVIYRRTDLNPPVDIPAKAQSVRDTMLCTCLVNEHKVRISTVEHINAALAGLGVDNIIVEVNAPEIPIMDGSAAPFIYLLMDAGIVELNSAKTFVRIKQSVRVQEGEKWAEFSPYHGFSLDFTIDFNHPAIDESTQRYYMDFSTETFTSQISRARTFGFIHDIENLQCRGLCLGGSFDCAIVVDKYRVLNTEGLRFKDEFVRHKILDAIGDLYMCGHSIIGAFTAYKSGHSLNNKLLQTVLSQKEAWELATFEHTDLLPITFIKPNLLFS >NZ_LT670851.1|WP_072666284.1|616558_617080_-|DUF721-domain-containing-protein MRDHQPQLIQSFLEKAQKQSTLQCIYQRTTILNGIRLLIRQVIPESLYPWYNVANIHQGILILHAANANYLMYLHYEQTHLLNIIREQILPSLISIHIKIDPTITMRAEKIVQDNNPSACTLKTLKTPFRQLGEKSANILLHIAKDCPEKLKNTLERLALFSVNRDTLLSDNQ >NZ_LT670851.1|WP_072666285.1|617505_620220_+|preprotein-translocase-subunit-SecA MFSKLLTKFFGSRNDRALRRMYKIVDRINQIEPDFIKLNDRQLRQKTTEFRARIKGGERLENLLPESFATVREASKRVCGLRHFDVQLLGGIVLNNRCIAEMRTGEGKTLTATLPAYLNALSGYGVHIVTVNDYLAKRDAENNRPTFEFLGLSVGINLPGMPHSSKYAAYAADITYGTNHEYGFDYLRDNMVFSVEDRVQRKLHYALVDEVDSILIDEARTPLIISGPTEDNSDLYIKINEIIPYLVRQEKEDSEKFQGSGHFSVDEKARQVHLTERGLVIVEQLLVKKGILTDGSSLYSQSNIIIMHHVIAALRAHALFICNVDYIVKNGDVLIVDEHTGRTMQGRRWSDGLHQAIEAKEGVVIHNENQTLASITFQNYFRLYEKLAGMTGTADTEAFEFHAIYNLDTIVIPTNRPMIRQDFPDLVYMTEREKIKAIIDDIHKRKAHGQPVLVGTISIEKSEMVSHALTSAGIQHTVLNAKFHAHEAAIISQAGQIGSVTIATNMAGRGTDISLGGKWHTELTAPLETNDEQIQKSKTEWKKRHNLVLASGGLHIIGTERHESRRIDNQLRGRSGRQGDPGSSRFYLSMEDTLMRIFTSDRMIRVMRKLGMKSGEAIQHPWVTQAIANAQRKVESRHFEIRKQLLEYDDVANDQRHAIYSQRNKLLDSYDISDIISNMQEDVYATIIDRYIPRQSMEEIWDISGLQTHLTKNFELNIPISEWLVEIPDMEDEALRKRIIDAAKSQYQQKRDLVNSEIICNLEKNVILHSIDALWTEHLSAMDCLRQGIHLRGYAQKDPKQEYKRESFMMFAQMLELLKYEAIKTLNKVDKLCILQEYGKKDTRLHIKKTLKVVPEQQCVHEVNVETEVEKSLSTKHPGYIIGRNDSCPCGSEKKYKKCCGYIV >NZ_LT670851.1|WP_072666286.1|621237_622287_-|EF-P-beta-lysylation-protein-EpmB MKPFLTTQTSIKEDWISQLANVITDFNELLALLGLSQHPDLIAQHTVRDHFSLRVPRSFVARMQKGDPQDPLFLQVATSQNELISALGYNIDPLSESSYNVCSGILHKYHNRALFLVKGRCAVHCRYCFRRYFPYKDHKGNKVNWQKALQYIHRQNNLDEIILSGGDPLIATDAELSWLFTQLEQVPHLKRIRIHTRLLVVIPQRITTALCERIKRSRLKVLIVTHINHSQEINDELCHGIWLLTRSGVTFLNQSVLLHDINDNAVTLAALSNALFDAGILPYYLHLLDKVHGSAHFYVSDDRARIIFRDFITKVSGYMVPKLVREIPGELSKTPIDLNMHQEKIQINV >NZ_LT670851.1|WP_072666287.1|622347_622914_+|elongation-factor-P MPAYSINNFRSGLKIIFDGEPCAIESSEFVKPGKGQAFARIKMRRLLTGGRLEKTFKATETVQSADVQDTNLNYLYNDDVFFYFIDPQSFEQHCIEANVVGNTAKWLFRNAECVVTLWNNRPIQVLPPNFVELAIIDTNPGLKGDTTGTSTKSAILSSGSIVKVPLFIKIGEVVKIDTRSGEYVARVK >NZ_LT670851.1|WP_072666288.1|623736_624378_+|electron-transport-complex-subunit-E MNKANDIITAGLWKNNSAVVQLLGLCPLLAVTSNATNALGLGVATTIVLFFTNSAISISRHWIPYEIRIPIYVIIIAAVVSCMDMLINAYAYDLYQSLGIFIPLIVTNCIVVGRAEVVASKNNVFLSALDGIVIGLGATSVMLFLGSIREIIGNGTIFDGADHLLGLWAKSIKVEVIHFDWPLLLAILPPGAFISLGLILALKYLIDQKFNAS >NZ_LT670851.1|WP_072666289.1|624435_625107_+|endonuclease-III MNNAKRKKILMRLKQNTLKPVTELNYSSHFELLIATVLSAQTTDISVNKITEKLYPVANTASAILELDTDGLQQYIKTIGLWKTKARNIINLCRILVKCYDGSIPNNREALEALPGVGRKTANVVLNIAFHLPTIAVDRHVFRVCNRTNFSIGRNVQEVEQNLLKFVPKKFQIHCHHWFIFHGRYTCLARKPKCFICNIKDLCEFEGKIDISIPHERLDSGSN >NZ_LT670851.1|WP_072666290.1|625555_626326_-|triose-phosphate-isomerase MRHPFVIGNWKLNGSKKFIDKFIVDLCRELHGVADCKVAIAPPMVYLDQAKKAMRNSKLLLGAQNVDSNLSGAFTGEISAGMLKDIGAQYVIIGHSERRILHLEDDQVIAKKFFILKNTGLIPILCIGETAAEKMAGKAKTICARQIDVILQLQGSQAFENTVIAYEPIWAIGTGCAATPDQIQEMHEFIRDHIAQKDSAVADQLALLYGGSVTKHNADKIFFQPDVDGALVGSASLIPDSFMEIIKLASVKKHRV |
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| CRISPR_ID | Spacer_Info | Spacer_region | Spacer_length | Hit_ID | Protospacer_location | Mismatch | Identity |
|---|
| CRISPR_ID | Spacer_Info | Spacer_region | Spacer_length | Hit_phage_ID | Hit_phage_def | Protospacer_location | Mismatch | Identity |
|---|
| Region | Region Position | Protein_number | Hit_taxonomy | Key_proteins | Att_site | Prophage annotation |
|---|
| Acr ID | Acr position | Acr size | Homology with known anti | Neighbor HTH/AcRanker | Neighbor Aca | In prophage | Protospacer in prophage |
|---|