CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP046048	Proteus mirabilis strain HN2p chromosome HN2p, complete sequence	3 crisprs	c2c9_V-U4,DEDDh,cas3,DinG,PD-DExK,RT,csa3,WYL,cas2	0	0	11	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP046048_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046048_1

2673457-2673631

Orphan

Consensus_repeat	Method
ATAATTGCCTTTAGGTTGATATTT	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP046048_1

>merge|NZ_CP046048|1|2673457-2673631|CRISPRCasFinder
ATAATTCCCTTTGGGTTGATAATTCCCCTTAGGCTGATATTTACCATCTGACTCTGATTTAGAATAACTATAACCTGTCGCTAAATAATTGCCTTTAGGTTGATATTTATTATCAGATTCCGTTTTAGTATAGGATGCACCCACTAATGCATAATTGCCTTTGGGTTGATAATTT

>NZ_CP046048|1|1|2673457-2673631|CRISPRCasFinder
ATAATTCCCTTTGGGTTGATAATT	CCCCTTAGGCTGATATTTACCATCTGACTCTGATTTAGAATAACTATAACCTGTCGCTAA
ATAATTGCCTTTAGGTTGATATTT	ATTATCAGATTCCGTTTTAGTATAGGATGCACCCACTAATGC
ATAATTGCCTTTGGGTTGATAATTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046048.1\|WP_004250735.1\|2666126_2667383_+\|mechanosensitive-ion-channel	unknown	unknown	gnl\|CDD\|366370
NZ_CP046048.1\|WP_004243622.1\|2677239_2678052_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046048.1\|WP_041701181.1\|2663792_2664650_-\|D-amino-acid-transaminase	unknown	unknown	gnl\|CDD\|180656
NZ_CP046048.1\|WP_049213336.1\|2670186_2670804_+\|dimethylsulfoxide-reductase-subunit-B	unknown	unknown	gnl\|CDD\|131996
NZ_CP046048.1\|WP_004250737.1\|2663169_2663730_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP046048.1\|WP_107337176.1\|2678843_2681147_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223496
NZ_CP046048.1\|WP_012368081.1\|2667736_2670175_+\|molybdopterin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274006
NZ_CP046048.1\|WP_004243600.1\|2662422_2663085_-\|AzlC-family-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224215
NZ_CP046048.1\|WP_004243604.1\|2664836_2665415_+\|HdeD-family-acid-resistance-protein	unknown	unknown	gnl\|CDD\|182308
NZ_CP046048.1\|WP_004243628.1\|2681747_2682200_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046048.1\|WP_004243612.1\|2671699_2672242_-\|DUF924-domain-containing-protein	unknown	unknown	gnl\|CDD\|377592
NZ_CP046048.1\|WP_004243617.1\|2676203_2676548_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046048.1\|WP_017628010.1\|2675023_2676211_-\|baseplate-J/gp47-family-protein	unknown	unknown	gnl\|CDD\|377414
NZ_CP046048.1\|WP_004243623.1\|2678020_2678341_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046048.1\|WP_004243621.1\|2676544_2677237_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|375779
NZ_CP046048.1\|WP_017628013.1\|2672810_2672990_+\|GhoT/OrtT-family-toxin	unknown	unknown	gnl\|CDD\|371222
NZ_CP046048.1\|WP_004243611.1\|2670807_2671584_+\|dimethyl-sulfoxide-reductase-anchor-subunit	unknown	unknown	gnl\|CDD\|225839
NZ_CP046048.1\|WP_036971128.1\|2678346_2678841_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046048.1\|WP_004243627.1\|2681229_2681688_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046048.1\|WP_004243615.1\|2674370_2675027_-\|DUF2612-domain-containing-protein	unknown	unknown	gnl\|CDD\|371354

Protein	Function_ID	Function_description	E-value
NZ_CP046048.1\|WP_004250735.1\|2666126_2667383_+\|mechanosensitive-ion-channel	gnl\|CDD\|366370	pfam00924, MS_channel, Mechanosensitive ion channel. Two members of this protein family of M. jannaschii have been functionally characterized. Both proteins form mechanosensitive (MS) ion channels upon reconstitution into liposomes and functional examination by the patch-clamp technique. Therefore this family are likely to also be MS channel proteins.	1.66127e-32
NZ_CP046048.1\|WP_041701181.1\|2663792_2664650_-\|D-amino-acid-transaminase	gnl\|CDD\|180656	PRK06680, PRK06680, D-amino acid aminotransferase; Reviewed.	7.55875e-127
NZ_CP046048.1\|WP_049213336.1\|2670186_2670804_+\|dimethylsulfoxide-reductase-subunit-B	gnl\|CDD\|131996	TIGR02951, anaerobic_dimethyl_sulfoxide_reductase_subunit_B, DMSO reductase, iron-sulfur subunit. This family consists of the iron-sulfur subunit, or chain B, of an enzyme called the anaerobic dimethyl sulfoxide reductase. Chains A and B are catalytic, while chain C is a membrane anchor.	1.91743e-91
NZ_CP046048.1\|WP_004250737.1\|2663169_2663730_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	5.86135e-15
NZ_CP046048.1\|WP_107337176.1\|2678843_2681147_-\|hypothetical-protein	gnl\|CDD\|223496	COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair].	0.00189201
NZ_CP046048.1\|WP_012368081.1\|2667736_2670175_+\|molybdopterin-dependent-oxidoreductase	gnl\|CDD\|274006	TIGR02166, Putative_dimethyl_sulfoxide_reductase_chain_YnfE, anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family. Members of this family include known and probable dimethyl sulfoxide reductase (DMSO reductase) A chains. In E. coli, dmsA encodes the canonical anaerobic DMSO reductase A chain. The paralog ynfE, as part of ynfFGH expressed from a multicopy plasmid, could complement a dmsABC deletion, suggesting a similar function and some overlap in specificity, although YnfE could not substitute for DmsA in a mixed complex.	0
NZ_CP046048.1\|WP_004243600.1\|2662422_2663085_-\|AzlC-family-ABC-transporter-permease	gnl\|CDD\|224215	COG1296, AzlC, Predicted branched-chain amino acid permease (azaleucine resistance) [Amino acid transport and metabolism].	1.03721e-32
NZ_CP046048.1\|WP_004243604.1\|2664836_2665415_+\|HdeD-family-acid-resistance-protein	gnl\|CDD\|182308	PRK10209, PRK10209, HdeD family acid-resistance protein.	2.20798e-64
NZ_CP046048.1\|WP_004243612.1\|2671699_2672242_-\|DUF924-domain-containing-protein	gnl\|CDD\|377592	pfam06041, DUF924, Bacterial protein of unknown function (DUF924). This family consists of several hypothetical bacterial proteins of unknown function. Structurally, this family resembles TPR-like repeats.	1.54842e-89
NZ_CP046048.1\|WP_017628010.1\|2675023_2676211_-\|baseplate-J/gp47-family-protein	gnl\|CDD\|377414	pfam04865, Baseplate_J, Baseplate J-like protein. The P2 bacteriophage J protein lies at the edge of the baseplate. This family also includes a number of bacterial homologs, which are thought to have been horizontally transferred.	9.13292e-07
NZ_CP046048.1\|WP_004243621.1\|2676544_2677237_-\|hypothetical-protein	gnl\|CDD\|375779	pfam18352, Gp138_N, Phage protein Gp138 N-terminal domain. This domain is found in the N-terminal domain of gene product 138 (gp138) in an unidentified bacteriophage. Gp138 is thought to be involved in the process of opening the host cell membrane during infection. The domain has an OB-fold with an intramolecular disulfide bond between C114 and C120.	1.64931e-18
NZ_CP046048.1\|WP_017628013.1\|2672810_2672990_+\|GhoT/OrtT-family-toxin	gnl\|CDD\|371222	pfam10753, Toxin_GhoT_OrtT, Toxin GhoT_OrtT. GhoT is part of the GhoT-GhoS type V toxin-antitoxin (TA) system. OrtT is homologous to GhoT, but it is not part of a TA pair. In this case, it acts as an independent toxin to reduce growth during stress related to amino acid and DNA synthesis.	7.72766e-13
NZ_CP046048.1\|WP_004243611.1\|2670807_2671584_+\|dimethyl-sulfoxide-reductase-anchor-subunit	gnl\|CDD\|225839	COG3302, DmsC, DMSO reductase anchor subunit [General function prediction only].	1.76747e-46
NZ_CP046048.1\|WP_004243615.1\|2674370_2675027_-\|DUF2612-domain-containing-protein	gnl\|CDD\|371354	pfam11041, DUF2612, Protein of unknown function (DUF2612). This is a phage protein family expressed from a range of Proteobacteria species. The function is not known.	4.26666e-71

>NZ_CP046048.1|WP_017628013.1|2672810_2672990_+|GhoT/OrtT-family-toxin
MSVIATIGIGYLIGAVLSFIITFFLTKDPSLAMRLLSAFLIAITWPLSFPMAIIFSIFG
>NZ_CP046048.1|WP_004243612.1|2671699_2672242_-|DUF924-domain-containing-protein
MVPYQPVLTFWFEECTPKQWFQKDSAFDKEIKDRFGELCISASRAELASWRESIEGRLGEIIILDQFSRNIWRDTPKAFAQDNMALILAQEAIRLPEYLTLTPVKRKFLIMPFMHSESQKIHQDAIALFSQLNDDDTYQYELRHKEIIDKYGRYPHRNEILGRTSTPEELAFLQQPGSSF
>NZ_CP046048.1|WP_004243611.1|2670807_2671584_+|dimethyl-sulfoxide-reductase-anchor-subunit
MHELPLVFFTVLGSSAAGLFLIAYISKKLGQIDEQQLRNANILALILMLVGLGIGGLHVGQPLRFFNMLLGVGRSPMSNEAFLSGVFTGFAFATVALTIMKKWRGLREICNLFTVIFGLAFVWSIPQVYHIPTIANWNTDYTTLQFWMTLLIGGGVLAMVSGARRLGALSFIIGAIITFAARSGYVSFLSFNGPELSAEQSLFWGFQLAVLALGIVVVGFSALKAQTSKVTLATCAAAVVIAELSGRIAFYNLWHITM
>NZ_CP046048.1|WP_049213336.1|2670186_2670804_+|dimethylsulfoxide-reductase-subunit-B
MKQYGFYFDSTKCTGCKTCQVSCKDEKDLDLGPKFRRVYEYGGGSWAKQDGIWTQNIYSYYLSISCNHCSNPTCVAGCPTGAMHKREEDGLVVVNQDVCVGCRYCELRCPYGAPQFDEKKKLMSKCDGCYERVAQGMKPVCVESCPQRALDFDDIDVIRAKHGTECGIAPMPDPSLTNPNIVIKAHKDAKPSGDKTGSVQNAAEV
>NZ_CP046048.1|WP_012368081.1|2667736_2670175_+|molybdopterin-dependent-oxidoreductase
MSMSKIKNNVSITEMSRRGFIQSAAVLSGAAAVAGTVSLPFSANAQTPQGIRPDETSETIKYSACLVNCGSRCPLKVHVKDGVIRRISNETMFDDSTFGLHQIRPCLRGRSVRWKTYNPDRLKYPMKRVGKRGEGKFERISWDEATSIIADKLKYTIDTYGNEAIYYQYGTGSTGANLHGRTACKRLLSTVGGFLSDYGTYSYSQLTGIVPYVYGDMLESLLTEIENSDLVVMFGHNLAETRMSGGGQFYETLNALDKSKSKVIIIDPRRTDSVTTLGAEWIPIYPGTDAALVAALGYVMIQEGITDEAFLREYCIGWDKQTLPASAPENGSYKDYILGNGPDGIAKTPEWASQLTGISVARIIQLAREIGNARAAWISQGWGIQRTSNGEQACRAIMMLPLMSGHIGRPGTNTGCWGGSIEYPVASFAIPNPVKTQIPTFMWSEAVARGEELTSKNAGVRNKDKLDTGIKFMWCYSSNVIGNQHADLNKTHELLQDESKCEFILVWDNHMTPSAKYADILLPDVTTVETNDLINNSYASGAYHYMVRLQNAIEPLWENRPNYDVLADIAEKLGVKEKFTEGRTYQEWIEYCYNQVKANNPALPSFAETNDMGIVDRKLPPRSAYVALEAFRQDPIANPLKTASGKIEIYSEKLMQDTEGWILPEGDRIPAIPEYCKNEEGVENVTLKEKFPLQMTGFHDKGHVHSTYFNVAMLREAIPHQFWLNPVDAAQRGLKSGDIAEIYNERGRLHIRVKVTDRVLPGVIAVPQGAWRSLDTTGVDTGGCINTLTSWHPSPFAKGNPQHTNLVEVKRA
>NZ_CP046048.1|WP_004250735.1|2666126_2667383_+|mechanosensitive-ion-channel
MQQQLLTWIRQFNEEYAQITSLLLVLLIIFVVALVLHFILHKLVLPKLSKAISKYDQKWQLSFEINKLFSRFAFLIQGVVINIQALLWMGPGKTQEILTTTAQAWCLLFGLLMIFSIMDLCLQIMRNSPSFGRLPLRGIFQSLKLVASVLIGIMIVSLLIGKSPLILLSGLGAMTAVLMLVFKDPIMGLVAGIQLSANNMISLGDWLEMPKYGADGAVVDISLTTVKVRNWDNTVTTIPTYSLISDSFKNWQAMTQSGGRRIKRSLSLDINSIYFLDQENIDKLEKAQLLEPYIKSKVGEISSYNASLCHEHQMPLNQRGMTNVGTFRAYVEAYLKNHPKIHKQMTIMVRQLAPTSEGLPIEIYAFTNTTVWVEYEAIQSDIFDHIFAILPQFGLRIHQSPTGSDVRALKFPTNIDTP
>NZ_CP046048.1|WP_004243604.1|2664836_2665415_+|HdeD-family-acid-resistance-protein
MLDINKNNLSQLTEKLVKKQCTLMSIIAMLGLLAGIICIINPFSSGVVVSVFLGVVFFACAITSIMAAFNSRISSGWSMLITLLAGFIYLFLGYIFITDPLNGMLSLAFIIGYLFIFAGILRLVLGFKQIKDSFYGWFNILVGFLDLVLAYFLLAFGPETSITLVMALIGIQLILSSITILSIASAIKRMTR
>NZ_CP046048.1|WP_041701181.1|2663792_2664650_-|D-amino-acid-transaminase
MSEIVYLNNQFVPKEQANISVFDRGFLFADAVYEVTAVINGQLIDFEGHFQRLQRSCKALSMPFSLTKEQLKEIHGQLIDKNHLHEGLIYLQVTRGADSSRFFDFPSSSVAPTLVLFVQHSTVVNHPNASKGISVVSVEDIRWQRCDIKTVALLAACLAKHHAHQQGADDAIFIKEGYITEGSSSNFFIVNQQDEIITRPLSQDILPGITRQAIIQLAKEQKLTIIERLFTLEEAKQAKEAFISSATTLIWPVISIDNEKINQGKVGALSQRLREIYLEKAGVKP
>NZ_CP046048.1|WP_004250737.1|2663169_2663730_+|helix-turn-helix-transcriptional-regulator
MSSPSAPIEIISQSIARERKKAGLSLAEIARRAGIAKSTLSQLEAGQGNPSIETLWAICVALNIPFSQLISSPKPEVKVIRKGDGFKISAEKAYYHAFLLSSCPNGAKRDIYTVIAQPGKDRVSDPHSKNVTEHILIISGRAIVGTLDNQQELSPGDYICYPGDVTHVLRALEPDTTAVMIIEHHN
>NZ_CP046048.1|WP_004243600.1|2662422_2663085_-|AzlC-family-ABC-transporter-permease
MHINSRLDNNVLRDILLVSLADGIVGISYGALAHTQGFDFWVPLSLSIFVLAGASEFLFIGVVAMGGSAIYAALAGLMVNARHIPFSMAVKELPGKGIKSLLGFHILNDESVVFGLSQSTAEQNRLAFWACGLGILLMWPLGTMLGVYLGSFIVDIKMLGLDAMFPAIILALSLPALKNKLTRKAAIIGSVIALATTLFLPAGIPVLLSLLGVLFVVRKI
>NZ_CP046048.1|WP_004243615.1|2674370_2675027_-|DUF2612-domain-containing-protein
MNIQQFDYHSDLLQAILWQYENADKLKSLAHFKADYFHQSTVLFWQNWYRDIFNIDTANDFGLAVWARILDVPLGIDISPSEKTKIGFGFGKKKANFNANFRRNTDYTLSLTLDQKRMLIRMRYFNLTQSPTVTNINQFLKRFFWRGESKVFVLDPFDMTYMYYVFNFNPDERLRLLLENFDLMPRPSGVGVKYRIITKKAFGYGSYRKNFLKSNFGE
>NZ_CP046048.1|WP_017628010.1|2675023_2676211_-|baseplate-J/gp47-family-protein
MADYRYINNKGVIVPDTAALRKEVEDEFRTVFGQSINLSPETPQGVLATMEIENRDAIVRNNAELANQINPDIAGGIFLDAIWALMGGERINATHSYLSNVEFMGVPGTIIPKGSQALTINGAVFETLTSLIIADTGKITGDMRAKEYGPITCGIGQLNKVASSVLGWEKVNNTTHAIIGRYAESDIKARRRRKQTLAKNTISVAQAITSSLYELAGVNSLSFRENFTDKTLTIDGISLLPHSIYVCVEGGDSHEIANVLLRTKTIGAAFNGDIEINLLEPASGQEYPIKFSRPKEVTIFCKVTVKKSSFDAQTIIPDALEKWSHGEIEGDNGLVVGRDVSPFEISAAVNAVEPHLFVTKVELSTDGKNWHVALIPIAINQIARLPKGAIQVVMV
>NZ_CP046048.1|WP_004243617.1|2676203_2676548_-|hypothetical-protein
MRTFAINQHNDLVIDAKGDLQICDNDEAVKNLCQHFIKAVRGEMLHKKDKGIPYWSATFSRQVDIPLFEMAFRQRLAEIEEVVAISHFNAFLDNGVLKYQADIRTIYGGFTLHG
>NZ_CP046048.1|WP_004243621.1|2676544_2677237_-|hypothetical-protein
MSKPNNDIASVGSLAGAFSSAFRHLMMNTDDMLPATVIDYDEKSNRAVIKPLVMMLTTDNQTISRAPVANIPVFRFGGGGFFIRAPIKAGDFGWLKANDRDISLIFQRGGLEDRPNTTRLHTFSDAMFFPDTLKGWVIDGKNIDALVIQSMDGSVCFSLHNDKVVLETPKYEINARETIFTGNVTVNGNYAVNGNSDSQGGVMRHNGKDIGSTHRHSGVQAGKDNTGSPI
>NZ_CP046048.1|WP_004243622.1|2677239_2678052_-|hypothetical-protein
MDLRRIRLGIEVGERLQWYEGLRISASGTKYANPLQNECNVTISGLNAQTRDYLLTETSPYNNNKQTRRLYLEVGRVNTGLLSLFIGDIVSAEIDSPPDVTLTLSAKTSHQSAGKIISSSGGTMRRLSEIALAIADDCGVKLDFQATDKNIANWYYCGSALHQIERLQEAGDVKAFIDDDTLFVKDDDKALKSRLRILNMNSGMIGIPKATESGLTVSYLIDSTSELGGMLRLESKLNPSLNGDYIIEQLAFSVASHEADFNYTAICKRA
>NZ_CP046048.1|WP_004243623.1|2678020_2678341_-|hypothetical-protein
MQEIPLQAIPNQRFSVAIAGVNWQLTLKVANQTMFCDIEREGEILITGMRLVANTPIIPYRYLNQGINLMFLTEHDALPWYEEFTKTQSLVYWSEEDGSSTNKARN
>NZ_CP046048.1|WP_036971128.1|2678346_2678841_-|hypothetical-protein
MITEVRIFDLASFTTLFDSVNPTQVTIDDSHQAITFTVENGESRSDHVVINPISISISLLLTGDIANAYATIKQLYDENTLVGIQTRVSTYQPMLLESLSHDEDPSKVDAIELKLKFIEWKSIEPEYNKKSAKSTKKPKQSSTINRGNVKSKKSMPIGKKRARR
>NZ_CP046048.1|WP_107337176.1|2678843_2681147_-|hypothetical-protein
MSLLPVFSQVLTLDAEVSDNALNNIRKSTNEILEEMKKIEQGASAGINHFFAFVQEIAASFNELSLEPEINLSVDNQEIIQASETVENSIQKIVKTALSSTQEFDTFLQNILTGLTSLSLDEPINIEINSGETQEKIHSITSSIDALKDAMSVLNYTRNLLSNDVDSDASHLANLNAEYQAMEDQLASLNNELTLLTEAEKKNKENKLVIDEVIKNLGADYDQFISTMQTQGIKAAIEEAQAQRRLSSSVDETGKSYQQTVDKMKDFILNAIGATDIMGTLQKVFSASLERSQEIESLDKLSKKMGVAAIDIDAFSGAMAAIGGTKEAAQADLAAMATAFDDTQDPIEQLLQVADNVKNMSFDDAQKELEKLGVVDDKTIELMMKGRQELERTMGVQKQFSGINDDSIESAIQLNATIHKFSQLAAQFKNNFLDMIIPTLAKGMEWFDKLVDFCVKNKDIVISFFSAIGAAVAIYYLPVMISAAASTLAMALPIIAIATVIGLLGVAFKLVYDDIMNFINGNDSMIGRILEKYPVLKSVIMTIWQAWQSFFEYLKEAVTVVADFVIAAWDLISNSFNQFIQTLEIGINNLIAWGQSIIDIFIFVSDSVVSLFEWMWGCVEKILDFVDEKINLIQDIWQSAKSFFGMDDEEKEIRVVQKVERRLTNEGELDYILPQSQTATRYYSPMQEVKSLNNGLAISSNNSLNPMTSQMISNQSSIKNESNVQIGEIKIETQATNGAEVVKEIKKSYTEQEAKNISQNHSSGWRV
>NZ_CP046048.1|WP_004243627.1|2681229_2681688_-|hypothetical-protein
MLIKPKEITVIDSDRQQHTFIISRLPATIGREILAKYPLSNAPKIGDYEVSKEAMLKMMAYVAVEKEGQEIYLKTSTLIDNHVPDGEALIRLELEMLKYNTSFFGNGGSQNFLQYLLGKLSGSLPSIIKTLMASLPSSSQPASPLSQNSKQP
>NZ_CP046048.1|WP_004243628.1|2681747_2682200_-|hypothetical-protein
MNDISATGLSLIIQASKTFPAGIPITTFSDEGDPLDLPTVNITQTAVDINGNLVSWSSPTPQTVTINVLAGSEEDENLAILFDANTARRGRRPASDVITLVASYGDGSITTARNGRITGGCRGNSVAGVGRLKSKQYTFIFQDFDRVRAR

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Crispr_ID: NZ_CP046048_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046048_2

2673781-2673888

Orphan

Consensus_repeat	Method
ATAATTGCCTTTAGGTTGATATTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP046048_2

>merge|NZ_CP046048|2|2673781-2673888|CRISPRCasFinder
ATAATTGCCTTTAGGTTGATATTTCCCATCAGACTCCGCTTTGGTATAACTATCGCCTTTATTCGCATAATTTCCCGCAGGAGCATAATTGCCTTTGGGTTGATATTT

>NZ_CP046048|2|2|2673781-2673888|CRISPRCasFinder
ATAATTGCCTTTAGGTTGATATTT	CCCATCAGACTCCGCTTTGGTATAACTATCGCCTTTATTCGCATAATTTCCCGCAGGAGC
ATAATTGCCTTTGGGTTGATATTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046048.1\|WP_004250735.1\|2666126_2667383_+\|mechanosensitive-ion-channel	unknown	unknown	gnl\|CDD\|366370
NZ_CP046048.1\|WP_004243622.1\|2677239_2678052_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046048.1\|WP_041701181.1\|2663792_2664650_-\|D-amino-acid-transaminase	unknown	unknown	gnl\|CDD\|180656
NZ_CP046048.1\|WP_049213336.1\|2670186_2670804_+\|dimethylsulfoxide-reductase-subunit-B	unknown	unknown	gnl\|CDD\|131996
NZ_CP046048.1\|WP_004250737.1\|2663169_2663730_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP046048.1\|WP_107337176.1\|2678843_2681147_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223496
NZ_CP046048.1\|WP_012368081.1\|2667736_2670175_+\|molybdopterin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274006
NZ_CP046048.1\|WP_004243600.1\|2662422_2663085_-\|AzlC-family-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224215
NZ_CP046048.1\|WP_004243604.1\|2664836_2665415_+\|HdeD-family-acid-resistance-protein	unknown	unknown	gnl\|CDD\|182308
NZ_CP046048.1\|WP_004243628.1\|2681747_2682200_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046048.1\|WP_004243612.1\|2671699_2672242_-\|DUF924-domain-containing-protein	unknown	unknown	gnl\|CDD\|377592
NZ_CP046048.1\|WP_004243617.1\|2676203_2676548_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046048.1\|WP_017628010.1\|2675023_2676211_-\|baseplate-J/gp47-family-protein	unknown	unknown	gnl\|CDD\|377414
NZ_CP046048.1\|WP_004243623.1\|2678020_2678341_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046048.1\|WP_004243621.1\|2676544_2677237_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|375779
NZ_CP046048.1\|WP_017628013.1\|2672810_2672990_+\|GhoT/OrtT-family-toxin	unknown	unknown	gnl\|CDD\|371222
NZ_CP046048.1\|WP_004243611.1\|2670807_2671584_+\|dimethyl-sulfoxide-reductase-anchor-subunit	unknown	unknown	gnl\|CDD\|225839
NZ_CP046048.1\|WP_036971128.1\|2678346_2678841_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046048.1\|WP_004243627.1\|2681229_2681688_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046048.1\|WP_004243615.1\|2674370_2675027_-\|DUF2612-domain-containing-protein	unknown	unknown	gnl\|CDD\|371354

Protein	Function_ID	Function_description	E-value
NZ_CP046048.1\|WP_004250735.1\|2666126_2667383_+\|mechanosensitive-ion-channel	gnl\|CDD\|366370	pfam00924, MS_channel, Mechanosensitive ion channel. Two members of this protein family of M. jannaschii have been functionally characterized. Both proteins form mechanosensitive (MS) ion channels upon reconstitution into liposomes and functional examination by the patch-clamp technique. Therefore this family are likely to also be MS channel proteins.	1.66127e-32
NZ_CP046048.1\|WP_041701181.1\|2663792_2664650_-\|D-amino-acid-transaminase	gnl\|CDD\|180656	PRK06680, PRK06680, D-amino acid aminotransferase; Reviewed.	7.55875e-127
NZ_CP046048.1\|WP_049213336.1\|2670186_2670804_+\|dimethylsulfoxide-reductase-subunit-B	gnl\|CDD\|131996	TIGR02951, anaerobic_dimethyl_sulfoxide_reductase_subunit_B, DMSO reductase, iron-sulfur subunit. This family consists of the iron-sulfur subunit, or chain B, of an enzyme called the anaerobic dimethyl sulfoxide reductase. Chains A and B are catalytic, while chain C is a membrane anchor.	1.91743e-91
NZ_CP046048.1\|WP_004250737.1\|2663169_2663730_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	5.86135e-15
NZ_CP046048.1\|WP_107337176.1\|2678843_2681147_-\|hypothetical-protein	gnl\|CDD\|223496	COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair].	0.00189201
NZ_CP046048.1\|WP_012368081.1\|2667736_2670175_+\|molybdopterin-dependent-oxidoreductase	gnl\|CDD\|274006	TIGR02166, Putative_dimethyl_sulfoxide_reductase_chain_YnfE, anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family. Members of this family include known and probable dimethyl sulfoxide reductase (DMSO reductase) A chains. In E. coli, dmsA encodes the canonical anaerobic DMSO reductase A chain. The paralog ynfE, as part of ynfFGH expressed from a multicopy plasmid, could complement a dmsABC deletion, suggesting a similar function and some overlap in specificity, although YnfE could not substitute for DmsA in a mixed complex.	0
NZ_CP046048.1\|WP_004243600.1\|2662422_2663085_-\|AzlC-family-ABC-transporter-permease	gnl\|CDD\|224215	COG1296, AzlC, Predicted branched-chain amino acid permease (azaleucine resistance) [Amino acid transport and metabolism].	1.03721e-32
NZ_CP046048.1\|WP_004243604.1\|2664836_2665415_+\|HdeD-family-acid-resistance-protein	gnl\|CDD\|182308	PRK10209, PRK10209, HdeD family acid-resistance protein.	2.20798e-64
NZ_CP046048.1\|WP_004243612.1\|2671699_2672242_-\|DUF924-domain-containing-protein	gnl\|CDD\|377592	pfam06041, DUF924, Bacterial protein of unknown function (DUF924). This family consists of several hypothetical bacterial proteins of unknown function. Structurally, this family resembles TPR-like repeats.	1.54842e-89
NZ_CP046048.1\|WP_017628010.1\|2675023_2676211_-\|baseplate-J/gp47-family-protein	gnl\|CDD\|377414	pfam04865, Baseplate_J, Baseplate J-like protein. The P2 bacteriophage J protein lies at the edge of the baseplate. This family also includes a number of bacterial homologs, which are thought to have been horizontally transferred.	9.13292e-07
NZ_CP046048.1\|WP_004243621.1\|2676544_2677237_-\|hypothetical-protein	gnl\|CDD\|375779	pfam18352, Gp138_N, Phage protein Gp138 N-terminal domain. This domain is found in the N-terminal domain of gene product 138 (gp138) in an unidentified bacteriophage. Gp138 is thought to be involved in the process of opening the host cell membrane during infection. The domain has an OB-fold with an intramolecular disulfide bond between C114 and C120.	1.64931e-18
NZ_CP046048.1\|WP_017628013.1\|2672810_2672990_+\|GhoT/OrtT-family-toxin	gnl\|CDD\|371222	pfam10753, Toxin_GhoT_OrtT, Toxin GhoT_OrtT. GhoT is part of the GhoT-GhoS type V toxin-antitoxin (TA) system. OrtT is homologous to GhoT, but it is not part of a TA pair. In this case, it acts as an independent toxin to reduce growth during stress related to amino acid and DNA synthesis.	7.72766e-13
NZ_CP046048.1\|WP_004243611.1\|2670807_2671584_+\|dimethyl-sulfoxide-reductase-anchor-subunit	gnl\|CDD\|225839	COG3302, DmsC, DMSO reductase anchor subunit [General function prediction only].	1.76747e-46
NZ_CP046048.1\|WP_004243615.1\|2674370_2675027_-\|DUF2612-domain-containing-protein	gnl\|CDD\|371354	pfam11041, DUF2612, Protein of unknown function (DUF2612). This is a phage protein family expressed from a range of Proteobacteria species. The function is not known.	4.26666e-71

>NZ_CP046048.1|WP_017628013.1|2672810_2672990_+|GhoT/OrtT-family-toxin
MSVIATIGIGYLIGAVLSFIITFFLTKDPSLAMRLLSAFLIAITWPLSFPMAIIFSIFG
>NZ_CP046048.1|WP_004243612.1|2671699_2672242_-|DUF924-domain-containing-protein
MVPYQPVLTFWFEECTPKQWFQKDSAFDKEIKDRFGELCISASRAELASWRESIEGRLGEIIILDQFSRNIWRDTPKAFAQDNMALILAQEAIRLPEYLTLTPVKRKFLIMPFMHSESQKIHQDAIALFSQLNDDDTYQYELRHKEIIDKYGRYPHRNEILGRTSTPEELAFLQQPGSSF
>NZ_CP046048.1|WP_004243611.1|2670807_2671584_+|dimethyl-sulfoxide-reductase-anchor-subunit
MHELPLVFFTVLGSSAAGLFLIAYISKKLGQIDEQQLRNANILALILMLVGLGIGGLHVGQPLRFFNMLLGVGRSPMSNEAFLSGVFTGFAFATVALTIMKKWRGLREICNLFTVIFGLAFVWSIPQVYHIPTIANWNTDYTTLQFWMTLLIGGGVLAMVSGARRLGALSFIIGAIITFAARSGYVSFLSFNGPELSAEQSLFWGFQLAVLALGIVVVGFSALKAQTSKVTLATCAAAVVIAELSGRIAFYNLWHITM
>NZ_CP046048.1|WP_049213336.1|2670186_2670804_+|dimethylsulfoxide-reductase-subunit-B
MKQYGFYFDSTKCTGCKTCQVSCKDEKDLDLGPKFRRVYEYGGGSWAKQDGIWTQNIYSYYLSISCNHCSNPTCVAGCPTGAMHKREEDGLVVVNQDVCVGCRYCELRCPYGAPQFDEKKKLMSKCDGCYERVAQGMKPVCVESCPQRALDFDDIDVIRAKHGTECGIAPMPDPSLTNPNIVIKAHKDAKPSGDKTGSVQNAAEV
>NZ_CP046048.1|WP_012368081.1|2667736_2670175_+|molybdopterin-dependent-oxidoreductase
MSMSKIKNNVSITEMSRRGFIQSAAVLSGAAAVAGTVSLPFSANAQTPQGIRPDETSETIKYSACLVNCGSRCPLKVHVKDGVIRRISNETMFDDSTFGLHQIRPCLRGRSVRWKTYNPDRLKYPMKRVGKRGEGKFERISWDEATSIIADKLKYTIDTYGNEAIYYQYGTGSTGANLHGRTACKRLLSTVGGFLSDYGTYSYSQLTGIVPYVYGDMLESLLTEIENSDLVVMFGHNLAETRMSGGGQFYETLNALDKSKSKVIIIDPRRTDSVTTLGAEWIPIYPGTDAALVAALGYVMIQEGITDEAFLREYCIGWDKQTLPASAPENGSYKDYILGNGPDGIAKTPEWASQLTGISVARIIQLAREIGNARAAWISQGWGIQRTSNGEQACRAIMMLPLMSGHIGRPGTNTGCWGGSIEYPVASFAIPNPVKTQIPTFMWSEAVARGEELTSKNAGVRNKDKLDTGIKFMWCYSSNVIGNQHADLNKTHELLQDESKCEFILVWDNHMTPSAKYADILLPDVTTVETNDLINNSYASGAYHYMVRLQNAIEPLWENRPNYDVLADIAEKLGVKEKFTEGRTYQEWIEYCYNQVKANNPALPSFAETNDMGIVDRKLPPRSAYVALEAFRQDPIANPLKTASGKIEIYSEKLMQDTEGWILPEGDRIPAIPEYCKNEEGVENVTLKEKFPLQMTGFHDKGHVHSTYFNVAMLREAIPHQFWLNPVDAAQRGLKSGDIAEIYNERGRLHIRVKVTDRVLPGVIAVPQGAWRSLDTTGVDTGGCINTLTSWHPSPFAKGNPQHTNLVEVKRA
>NZ_CP046048.1|WP_004250735.1|2666126_2667383_+|mechanosensitive-ion-channel
MQQQLLTWIRQFNEEYAQITSLLLVLLIIFVVALVLHFILHKLVLPKLSKAISKYDQKWQLSFEINKLFSRFAFLIQGVVINIQALLWMGPGKTQEILTTTAQAWCLLFGLLMIFSIMDLCLQIMRNSPSFGRLPLRGIFQSLKLVASVLIGIMIVSLLIGKSPLILLSGLGAMTAVLMLVFKDPIMGLVAGIQLSANNMISLGDWLEMPKYGADGAVVDISLTTVKVRNWDNTVTTIPTYSLISDSFKNWQAMTQSGGRRIKRSLSLDINSIYFLDQENIDKLEKAQLLEPYIKSKVGEISSYNASLCHEHQMPLNQRGMTNVGTFRAYVEAYLKNHPKIHKQMTIMVRQLAPTSEGLPIEIYAFTNTTVWVEYEAIQSDIFDHIFAILPQFGLRIHQSPTGSDVRALKFPTNIDTP
>NZ_CP046048.1|WP_004243604.1|2664836_2665415_+|HdeD-family-acid-resistance-protein
MLDINKNNLSQLTEKLVKKQCTLMSIIAMLGLLAGIICIINPFSSGVVVSVFLGVVFFACAITSIMAAFNSRISSGWSMLITLLAGFIYLFLGYIFITDPLNGMLSLAFIIGYLFIFAGILRLVLGFKQIKDSFYGWFNILVGFLDLVLAYFLLAFGPETSITLVMALIGIQLILSSITILSIASAIKRMTR
>NZ_CP046048.1|WP_041701181.1|2663792_2664650_-|D-amino-acid-transaminase
MSEIVYLNNQFVPKEQANISVFDRGFLFADAVYEVTAVINGQLIDFEGHFQRLQRSCKALSMPFSLTKEQLKEIHGQLIDKNHLHEGLIYLQVTRGADSSRFFDFPSSSVAPTLVLFVQHSTVVNHPNASKGISVVSVEDIRWQRCDIKTVALLAACLAKHHAHQQGADDAIFIKEGYITEGSSSNFFIVNQQDEIITRPLSQDILPGITRQAIIQLAKEQKLTIIERLFTLEEAKQAKEAFISSATTLIWPVISIDNEKINQGKVGALSQRLREIYLEKAGVKP
>NZ_CP046048.1|WP_004250737.1|2663169_2663730_+|helix-turn-helix-transcriptional-regulator
MSSPSAPIEIISQSIARERKKAGLSLAEIARRAGIAKSTLSQLEAGQGNPSIETLWAICVALNIPFSQLISSPKPEVKVIRKGDGFKISAEKAYYHAFLLSSCPNGAKRDIYTVIAQPGKDRVSDPHSKNVTEHILIISGRAIVGTLDNQQELSPGDYICYPGDVTHVLRALEPDTTAVMIIEHHN
>NZ_CP046048.1|WP_004243600.1|2662422_2663085_-|AzlC-family-ABC-transporter-permease
MHINSRLDNNVLRDILLVSLADGIVGISYGALAHTQGFDFWVPLSLSIFVLAGASEFLFIGVVAMGGSAIYAALAGLMVNARHIPFSMAVKELPGKGIKSLLGFHILNDESVVFGLSQSTAEQNRLAFWACGLGILLMWPLGTMLGVYLGSFIVDIKMLGLDAMFPAIILALSLPALKNKLTRKAAIIGSVIALATTLFLPAGIPVLLSLLGVLFVVRKI
>NZ_CP046048.1|WP_004243615.1|2674370_2675027_-|DUF2612-domain-containing-protein
MNIQQFDYHSDLLQAILWQYENADKLKSLAHFKADYFHQSTVLFWQNWYRDIFNIDTANDFGLAVWARILDVPLGIDISPSEKTKIGFGFGKKKANFNANFRRNTDYTLSLTLDQKRMLIRMRYFNLTQSPTVTNINQFLKRFFWRGESKVFVLDPFDMTYMYYVFNFNPDERLRLLLENFDLMPRPSGVGVKYRIITKKAFGYGSYRKNFLKSNFGE
>NZ_CP046048.1|WP_017628010.1|2675023_2676211_-|baseplate-J/gp47-family-protein
MADYRYINNKGVIVPDTAALRKEVEDEFRTVFGQSINLSPETPQGVLATMEIENRDAIVRNNAELANQINPDIAGGIFLDAIWALMGGERINATHSYLSNVEFMGVPGTIIPKGSQALTINGAVFETLTSLIIADTGKITGDMRAKEYGPITCGIGQLNKVASSVLGWEKVNNTTHAIIGRYAESDIKARRRRKQTLAKNTISVAQAITSSLYELAGVNSLSFRENFTDKTLTIDGISLLPHSIYVCVEGGDSHEIANVLLRTKTIGAAFNGDIEINLLEPASGQEYPIKFSRPKEVTIFCKVTVKKSSFDAQTIIPDALEKWSHGEIEGDNGLVVGRDVSPFEISAAVNAVEPHLFVTKVELSTDGKNWHVALIPIAINQIARLPKGAIQVVMV
>NZ_CP046048.1|WP_004243617.1|2676203_2676548_-|hypothetical-protein
MRTFAINQHNDLVIDAKGDLQICDNDEAVKNLCQHFIKAVRGEMLHKKDKGIPYWSATFSRQVDIPLFEMAFRQRLAEIEEVVAISHFNAFLDNGVLKYQADIRTIYGGFTLHG
>NZ_CP046048.1|WP_004243621.1|2676544_2677237_-|hypothetical-protein
MSKPNNDIASVGSLAGAFSSAFRHLMMNTDDMLPATVIDYDEKSNRAVIKPLVMMLTTDNQTISRAPVANIPVFRFGGGGFFIRAPIKAGDFGWLKANDRDISLIFQRGGLEDRPNTTRLHTFSDAMFFPDTLKGWVIDGKNIDALVIQSMDGSVCFSLHNDKVVLETPKYEINARETIFTGNVTVNGNYAVNGNSDSQGGVMRHNGKDIGSTHRHSGVQAGKDNTGSPI
>NZ_CP046048.1|WP_004243622.1|2677239_2678052_-|hypothetical-protein
MDLRRIRLGIEVGERLQWYEGLRISASGTKYANPLQNECNVTISGLNAQTRDYLLTETSPYNNNKQTRRLYLEVGRVNTGLLSLFIGDIVSAEIDSPPDVTLTLSAKTSHQSAGKIISSSGGTMRRLSEIALAIADDCGVKLDFQATDKNIANWYYCGSALHQIERLQEAGDVKAFIDDDTLFVKDDDKALKSRLRILNMNSGMIGIPKATESGLTVSYLIDSTSELGGMLRLESKLNPSLNGDYIIEQLAFSVASHEADFNYTAICKRA
>NZ_CP046048.1|WP_004243623.1|2678020_2678341_-|hypothetical-protein
MQEIPLQAIPNQRFSVAIAGVNWQLTLKVANQTMFCDIEREGEILITGMRLVANTPIIPYRYLNQGINLMFLTEHDALPWYEEFTKTQSLVYWSEEDGSSTNKARN
>NZ_CP046048.1|WP_036971128.1|2678346_2678841_-|hypothetical-protein
MITEVRIFDLASFTTLFDSVNPTQVTIDDSHQAITFTVENGESRSDHVVINPISISISLLLTGDIANAYATIKQLYDENTLVGIQTRVSTYQPMLLESLSHDEDPSKVDAIELKLKFIEWKSIEPEYNKKSAKSTKKPKQSSTINRGNVKSKKSMPIGKKRARR
>NZ_CP046048.1|WP_107337176.1|2678843_2681147_-|hypothetical-protein
MSLLPVFSQVLTLDAEVSDNALNNIRKSTNEILEEMKKIEQGASAGINHFFAFVQEIAASFNELSLEPEINLSVDNQEIIQASETVENSIQKIVKTALSSTQEFDTFLQNILTGLTSLSLDEPINIEINSGETQEKIHSITSSIDALKDAMSVLNYTRNLLSNDVDSDASHLANLNAEYQAMEDQLASLNNELTLLTEAEKKNKENKLVIDEVIKNLGADYDQFISTMQTQGIKAAIEEAQAQRRLSSSVDETGKSYQQTVDKMKDFILNAIGATDIMGTLQKVFSASLERSQEIESLDKLSKKMGVAAIDIDAFSGAMAAIGGTKEAAQADLAAMATAFDDTQDPIEQLLQVADNVKNMSFDDAQKELEKLGVVDDKTIELMMKGRQELERTMGVQKQFSGINDDSIESAIQLNATIHKFSQLAAQFKNNFLDMIIPTLAKGMEWFDKLVDFCVKNKDIVISFFSAIGAAVAIYYLPVMISAAASTLAMALPIIAIATVIGLLGVAFKLVYDDIMNFINGNDSMIGRILEKYPVLKSVIMTIWQAWQSFFEYLKEAVTVVADFVIAAWDLISNSFNQFIQTLEIGINNLIAWGQSIIDIFIFVSDSVVSLFEWMWGCVEKILDFVDEKINLIQDIWQSAKSFFGMDDEEKEIRVVQKVERRLTNEGELDYILPQSQTATRYYSPMQEVKSLNNGLAISSNNSLNPMTSQMISNQSSIKNESNVQIGEIKIETQATNGAEVVKEIKKSYTEQEAKNISQNHSSGWRV
>NZ_CP046048.1|WP_004243627.1|2681229_2681688_-|hypothetical-protein
MLIKPKEITVIDSDRQQHTFIISRLPATIGREILAKYPLSNAPKIGDYEVSKEAMLKMMAYVAVEKEGQEIYLKTSTLIDNHVPDGEALIRLELEMLKYNTSFFGNGGSQNFLQYLLGKLSGSLPSIIKTLMASLPSSSQPASPLSQNSKQP
>NZ_CP046048.1|WP_004243628.1|2681747_2682200_-|hypothetical-protein
MNDISATGLSLIIQASKTFPAGIPITTFSDEGDPLDLPTVNITQTAVDINGNLVSWSSPTPQTVTINVLAGSEEDENLAILFDANTARRGRRPASDVITLVASYGDGSITTARNGRITGGCRGNSVAGVGRLKSKQYTFIFQDFDRVRAR

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Crispr_ID: NZ_CP046048_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046048_3

3032996-3033138

Orphan

Consensus_repeat	Method
GGTGATATCAATTTCACAGGTGG	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP046048_3

>merge|NZ_CP046048|3|3032996-3033138|CRISPRCasFinder
GGTGATATCAATTTCACAGGTGGTGGCGCTGGTAATGTCATTAAATCTGATGTTACACAAGGTGATATCAATTTTACAGGTGGCGGCATAGCAAATGTAATAAAACATAACTCTAATTATGGTAATACCAACTTTACTGGTGG

>NZ_CP046048|3|3|3032996-3033138|CRISPRCasFinder
GGTGATATCAATTTCACAGGTGG	TGGCGCTGGTAATGTCATTAAATCTGATGTTACACAA
GGTGATATCAATTTTACAGGTGG	CGGCATAGCAAATGTAATAAAACATAACTCTAATTAT
GGTAATACCAACTTTACTGGTGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046048.1\|WP_104459312.1\|3023609_3024329_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046048.1\|WP_004244077.1\|3045587_3047015_-\|dihydrolipoyl-dehydrogenase	unknown	unknown	gnl\|CDD\|180579
NZ_CP046048.1\|WP_060555640.1\|3058237_3058852_+\|dephospho-CoA-kinase	unknown	unknown	gnl\|CDD\|234620
NZ_CP046048.1\|WP_004248541.1\|3030933_3031080_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046048.1\|WP_168725682.1\|3027120_3027492_-\|YacL-family-protein	unknown	unknown	gnl\|CDD\|235372
NZ_CP046048.1\|WP_004244059.1\|3021536_3022436_+\|LysR-family-transcriptional-regulator-ArgP	unknown	unknown	gnl\|CDD\|235144
NZ_CP046048.1\|WP_012368224.1\|3026168_3027029_-\|small-conductance-mechanosensitive-channel-MscS	unknown	unknown	gnl\|CDD\|182386
NZ_CP046048.1\|WP_004244080.1\|3049100_3051767_-\|pyruvate-dehydrogenase-(acetyl-transferring),-homodimeric-type	unknown	unknown	gnl\|CDD\|236500
NZ_CP046048.1\|WP_064506049.1\|3022638_3023613_-\|nucleotidyl-transferase-AbiEii/AbiGii-toxin-family-protein	unknown	unknown	gnl\|CDD\|378065
NZ_CP046048.1\|WP_060555638.1\|3053027_3053570_-\|1,6-anhydro-N-acetylmuramyl-L-alanine-amidase-AmpD	unknown	unknown	gnl\|CDD\|236984
NZ_CP046048.1\|WP_004250354.1\|3058854_3059607_+\|cell-division-protein-ZapD	unknown	unknown	gnl\|CDD\|235389
NZ_CP046048.1\|WP_104459311.1\|3024552_3025287_-\|oxidative-stress-defense-protein	unknown	unknown	gnl\|CDD\|236840
NZ_CP046048.1\|WP_036905137.1\|3031080_3031308_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046048.1\|WP_060558294.1\|3047216_3049088_-\|pyruvate-dehydrogenase-complex-dihydrolipoyllysine-residue-acetyltransferase	unknown	unknown	gnl\|CDD\|236999
NZ_CP046048.1\|WP_049203012.1\|3054322_3055426_+\|Flp-pilus-assembly-complex-ATPase-component-TadA	unknown	unknown	gnl\|CDD\|236694
NZ_CP046048.1\|WP_110706929.1\|3051930_3052701_-\|pyruvate-dehydrogenase-complex-transcriptional-repressor-PdhR	unknown	unknown	gnl\|CDD\|181879
NZ_CP046048.1\|WP_004244067.1\|3027662_3030260_-\|bifunctional-aconitate-hydratase-2/2-methylisocitrate-dehydratase	unknown	unknown	gnl\|CDD\|236424
NZ_CP046048.1\|WP_001339197.1\|3056128_3057337_+\|IS4-like-element-ISVsa5-family-transposase	unknown	unknown	gnl\|CDD\|376573
NZ_CP046048.1\|WP_049203011.1\|3053780_3054224_+\|prepilin-peptidase-dependent-pilin	unknown	unknown	gnl\|CDD\|236718
NZ_CP046048.1\|WP_104459310.1\|3025377_3026001_-\|arginine-exporter-ArgO	unknown	unknown	gnl\|CDD\|236463

Protein	Function_ID	Function_description	E-value
NZ_CP046048.1\|WP_012368224.1\|3026168_3027029_-\|small-conductance-mechanosensitive-channel-MscS	gnl\|CDD\|182386	PRK10334, PRK10334, small-conductance mechanosensitive channel MscS.	3.21493e-120
NZ_CP046048.1\|WP_060555640.1\|3058237_3058852_+\|dephospho-CoA-kinase	gnl\|CDD\|234620	PRK00081, coaE, dephospho-CoA kinase; Reviewed.	7.63102e-90
NZ_CP046048.1\|WP_049203012.1\|3054322_3055426_+\|Flp-pilus-assembly-complex-ATPase-component-TadA	gnl\|CDD\|236694	PRK10436, PRK10436, hypothetical protein; Provisional.	1.61652e-179
NZ_CP046048.1\|WP_168725682.1\|3027120_3027492_-\|YacL-family-protein	gnl\|CDD\|235372	PRK05248, PRK05248, hypothetical protein; Provisional.	2.87698e-60
NZ_CP046048.1\|WP_004244059.1\|3021536_3022436_+\|LysR-family-transcriptional-regulator-ArgP	gnl\|CDD\|235144	PRK03635, PRK03635, ArgP/LysG family DNA-binding transcriptional regulator.	1.29397e-161
NZ_CP046048.1\|WP_004244077.1\|3045587_3047015_-\|dihydrolipoyl-dehydrogenase	gnl\|CDD\|180579	PRK06467, PRK06467, dihydrolipoamide dehydrogenase; Reviewed.	0
NZ_CP046048.1\|WP_104459310.1\|3025377_3026001_-\|arginine-exporter-ArgO	gnl\|CDD\|236463	PRK09304, PRK09304, arginine exporter ArgO.	5.53506e-119
NZ_CP046048.1\|WP_064506049.1\|3022638_3023613_-\|nucleotidyl-transferase-AbiEii/AbiGii-toxin-family-protein	gnl\|CDD\|378065	pfam08843, AbiEii, Nucleotidyl transferase AbiEii toxin, Type IV TA system. This family was recently identified as belonging to the nucleotidyltransferase superfamily. AbiEii is the cognate toxin of the type IV toxin-antitoxin 'innate immunity' bacterial abortive infection (Abi) system that protects bacteria from the spread of a phage infection. The Abi system is activated upon infection with phage to abort the cell thus preventing the spread of phage through viral replication. There are some 20 or more Abis, and they are predominantly plasmid-encoded lactococcal systems. TA, toxin-antitoxin, systems on plasmids function by killing cells that lose the plasmid upon division. AbiE phage resistance systems function as novel Type IV TAs and are widespread in bacteria and archaea. The cognate antitoxin is pfam13338.	1.77496e-24
NZ_CP046048.1\|WP_060555638.1\|3053027_3053570_-\|1,6-anhydro-N-acetylmuramyl-L-alanine-amidase-AmpD	gnl\|CDD\|236984	PRK11789, PRK11789, 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD.	2.03006e-131
NZ_CP046048.1\|WP_004250354.1\|3058854_3059607_+\|cell-division-protein-ZapD	gnl\|CDD\|235389	PRK05287, PRK05287, cell division protein ZapD.	1.19728e-117
NZ_CP046048.1\|WP_110706929.1\|3051930_3052701_-\|pyruvate-dehydrogenase-complex-transcriptional-repressor-PdhR	gnl\|CDD\|181879	PRK09464, pdhR, pyruvate dehydrogenase complex transcriptional repressor PdhR.	8.44249e-168
NZ_CP046048.1\|WP_060558294.1\|3047216_3049088_-\|pyruvate-dehydrogenase-complex-dihydrolipoyllysine-residue-acetyltransferase	gnl\|CDD\|236999	PRK11854, aceF, pyruvate dehydrogenase dihydrolipoyltransacetylase; Validated.	0
NZ_CP046048.1\|WP_104459311.1\|3024552_3025287_-\|oxidative-stress-defense-protein	gnl\|CDD\|236840	PRK11087, PRK11087, oxidative stress defense protein; Provisional.	3.45973e-114
NZ_CP046048.1\|WP_004244067.1\|3027662_3030260_-\|bifunctional-aconitate-hydratase-2/2-methylisocitrate-dehydratase	gnl\|CDD\|236424	PRK09238, PRK09238, bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Validated.	0
NZ_CP046048.1\|WP_001339197.1\|3056128_3057337_+\|IS4-like-element-ISVsa5-family-transposase	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	7.26216e-11
NZ_CP046048.1\|WP_049203011.1\|3053780_3054224_+\|prepilin-peptidase-dependent-pilin	gnl\|CDD\|236718	PRK10574, PRK10574, putative major pilin subunit; Provisional.	1.09342e-54
NZ_CP046048.1\|WP_004244080.1\|3049100_3051767_-\|pyruvate-dehydrogenase-(acetyl-transferring),-homodimeric-type	gnl\|CDD\|236500	PRK09405, aceE, pyruvate dehydrogenase subunit E1; Reviewed.	0

>NZ_CP046048.1|WP_036905137.1|3031080_3031308_+|hypothetical-protein
MIHIPASGFIYMASIIKSMLENPCINKEFEKLIAADLLPILQNETNMTENFTALHLIKKTNNRRIILYKNLFIIN
>NZ_CP046048.1|WP_004248541.1|3030933_3031080_+|hypothetical-protein
MAINEKFVQEISSINYNNSIFSLYFVGQDPHKIAQGIMPEKDEELALK
>NZ_CP046048.1|WP_004244067.1|3027662_3030260_-|bifunctional-aconitate-hydratase-2/2-methylisocitrate-dehydratase
MLEEYRKHVAERAAEGVVPKPLDATQTAALVELLKSPPKGEEEFLLDLIVNRVPPGVDEAAYVKAGFLTALAKGETTSPLITPEKAVELLGTMQGGYNIHALIEALDNDKLAPIAAKALSHTLLMFDSFYDVEEKAKAGNVYAKQIMQSWADGEWFTERPELAEKITVTVFKVTGETNTDDLSPAPDAWSRPDIPLHALAMLKNAREGIEPDQPGSVGPIKQIEALNKKGFPLAYVGDVVGTGSSRKSATNSVLWFMGDDIPYVPNKRGGGVVLGGKIAPIFFNTMEDAGALPIEVDVSKLNMGDVIDIYPYKGEIRNHETNELLETFALKTEVLIDEVRAGGRIPLIIGRGLTSKARSALGLPPSTLFRHAKAVEQSDRGFSLAQKMVGRACGRDGIRPGEYCEPKMTSVGSQDTTGPMTRDELKDLACLGFSADLVMQSFCHTAAYPKPVDVTTHHTLPDFIMNRGGVSLRPGDGIIHSWLNRMLLPDTVGTGGDSHTRFPIGISFPAGSGLVAFAAATGVMPLDMPESVLVRFKGKMQPGVTLRDLVHAIPLYAIKEGLLTVEKKGKKNIFSGRILEIEGLPELKVEQAFELADASAERSAAGCTIKLDKAPIIEYLQSNIVLLKWMIAEGYGDRRTLERRITAMENWLADPQLLEADADAEYAAVIEIDLNEIKEPILCAPNDPDDARLLSEVANSKIDEVFIGSCMTNIGHFRAAGKLLDQHKGQLPTRLWVAPPTKMDAAQLTEEGYYSVFGKSGARIEVPGCSLCMGNQARVADGATVVSTSTRNFPNRLGTGANVYLASAELAAVASLLGRLPEPQEYLDFINKVDETAEDTYRYLNFDQLEQYTDKATQVIFQTTV
>NZ_CP046048.1|WP_168725682.1|3027120_3027492_-|YacL-family-protein
MDYEFQRDLTGGILARFSMDHEAIGYWLNDEIQGDISLIDQILTEMDEVKGSEKQWQLIGKEYNLSIDDEEIMVRANTLHFETDDLEEGMSYYDNESIAFCGLDDFATMLQKYRLFILENRRS
>NZ_CP046048.1|WP_012368224.1|3026168_3027029_-|small-conductance-mechanosensitive-channel-MscS
MNELPASLDEATGWFVANQELFIQYAVNIVAAFLILFIGLFVAKMVSKGVARILTLRHIDATVVTFLSVLVRYTVIAFTLIAVLGRLGVQTASVIAVLGAAGLAVGLALQGSLSNFAAGVLIVIFRPIRAGEYVMIGAVEGTVRDVQIFSTTLRSADDRIIVIPNSKIISSEVINLSREPNRRTQIIVGVAYDADIDKVKQVLGDVVAQDKRIQHNQGVTIRLHEMAPSSLNFVVRVWTTNDDAWPVYWDLMENFKRALDANNIGIPFPQMDVYMHQAQNTVMKAE
>NZ_CP046048.1|WP_104459310.1|3025377_3026001_-|arginine-exporter-ArgO
MLTTFFQGFLLSAAMILPIGAQNAFVLQQGSKKQYHLMSAFLCALSDVILISGGVFGGSALLSQSEHLLLLITWGGVAFLLWYGWNAFKTAFTKEIELSQHKNQVKSRWRVIVTLVAVTWLNPHVYLDTFVVLGSIGGQLSAELRPWFTFGAVFASISWFFALSLLAAWFSPILSQVTAQRIINLFVGCVMWFIALQLAAQGWKNLF
>NZ_CP046048.1|WP_104459311.1|3024552_3025287_-|oxidative-stress-defense-protein
MKVKEMVLASMLALGAPSIALAGAVPEGPHITTSGNATIKATPDMATLNIQVSEKAKDAAQAKKQVDERVAKYFAFLKENGVTKEDIDAANIRTQPNYEYDKKAERSVINGYTATRTVDVKIKKLDQLNTLLDGALAAGLNEINNVEFGVNDPEQYKAKAREVAIKNAIQQASSVAKGFGADLGAVYSVSYRAPEATPYPIARMKMDAMALSAPSPEAVKETYQQQSIEFKDYVDVVFELKTAK
>NZ_CP046048.1|WP_104459312.1|3023609_3024329_-|hypothetical-protein
MKIKPLVEKEINRFEFGKIFTYRDLTPYLSNPETTVKAVSRLVKNGDIKRFAKGQFYRPKKGIFGEMQLSDAEKLKTFMYQNGKRKGYITGMGLYNRLGLTTQIPKTITIASDKSPQRKDFGTVEVKLVKAKVPVSESNREYLEILDVLSNIKKIPDSNPSEVMKVIAKKLKNIKKDGLYELINLASFYSPVTRALLGLLIENININLALELKKQLNPTTHYRIGLDSYWDNAEEWNIE
>NZ_CP046048.1|WP_064506049.1|3022638_3023613_-|nucleotidyl-transferase-AbiEii/AbiGii-toxin-family-protein
MNLHNNPDVFLELINRTAEYFKIPEVYVEKDYWVTHVLLQLSLSEFRNDFIFKGGTALSKVFGLIKRFSEDVDLAMFNNRGLSSNQIKKCMKVAEETIATGLTYIQKPDESKGSQFRKVYYKFPRIVSGEFGHASDVILLETNSFTSPEPFSFMPTESLIAEFIKKAQIEGGNEIITHYGLEKFEVNVLDIKRTVAEKILGLVRASSEADPKQALADKIRHIYDLCMIKRNKHYSQFFDSDSLWKMMDIVIQADRDQFREAGQWLDQPLHKSVLFSKSSEIWESIRGIFHGEFSELVYDSDLPSDDEVFSLLSSVASLLQKWSD
>NZ_CP046048.1|WP_004244059.1|3021536_3022436_+|LysR-family-transcriptional-regulator-ArgP
MKRPDYRALQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENLFGQPLLVRTVPPQPTEQGQKLLALLHQVEMLEEQWLGDENSGSTPLLLSLAVNADSLATWLLPALHPVLTQLPIRLNIQVEDETRTQERLRRGEVVGAISIQPQALPSCLVDQLGALDYLFVASPDFAQRYFANGVTKSSLLKAPAVAFDHLDDMHQAFLQQNFGLSPGSVPCHIVNSSEAFVQLAKQGSTCCMIPHLQIADELKSGELIDLTPGLCQRRMLYWHRFAPESRTMRKVTDALLDYGRKVLKQDEE
>NZ_CP046048.1|WP_004244077.1|3045587_3047015_-|dihydrolipoyl-dehydrogenase
MSTEIKAQVVVLGAGPAGYSAAFRCADLGLDTVLVERHSTLGGVCLNVGCIPSKALLHVAKVIEEAKALSEHGVVFDAPKTDIDKIRIWKDKVISQLTGGLAGMAKGRKVNVVNGEARFTGSHTLSVEGSEGTTTITFENAIVAAGSRPIELPFIPHEDPRVWDSTDALQLKTVPERLLVMGGGIIGLEMGTVYHALGSQIDVVEMFDQVIPAADKDVVKVFTKRISKKFNLMLETKVTAVEAKEDGIYVTMEGKKAPAEPQRYDAVLVAIGRVPNGKLLDAGKAGIEVDDRGFIHVDKQMRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEVISGKKHYFDPKVIPSIAYTEPEVAWVGMTEKEAKEKGVSYEVATFPWAASGRAIASDCADGMTKLIFDKETNRVIGGAIVGSNGGELLGEIGLAIEMGCDAEDIALTIHAHPTLYESIGMAAEVFEGSITDLPNPKAKKKK
>NZ_CP046048.1|WP_060558294.1|3047216_3049088_-|pyruvate-dehydrogenase-complex-dihydrolipoyllysine-residue-acetyltransferase
MSIEIKVPDIGADEVEVTEVMVKVGDRIEEEQSLITVEGDKASMEVPSPQAGIVKEIKIAVGDKVETGSLIMIFDTEEGAQAPAQEAAPAPSAAAPAASELKEVHVPDIGGDEVEVTEVMVNVGDTISEEQSLITVEGDKASMEVPAPFAGVVKEIKIAVGDKVSTGSLIMVFEVAGSAPAPSASAPAPAASAPAASAIKDVNVPDIGGDEVEVTEVMVKVGDTIAEEQSLITVEGDKASMEVPAPFAGVVKEIKIAVGDKVKTGSLIMTFEVAGAAPAAQAPAAPAASTSAAPAPSAPAKAPASAPAAKEEFVENEAYVHATPVIRRLAREFGVNLAKVKGTGRKGRILREDVQSYVKELIKRAESAPANAGGGLPGMLPWPKVDFSKFGEIEEVELGRIQKISGANLSRNWVVIPHVNLFDEADITEVEEFRKQQNKEAEKKKLDVKITPLVFVMKAAAKALADMPRFNSSISEDGQKLILKKYINIGIAVDTPNGLVVPVFKDVNKKGILELSYELAEVSKKARAGKLTASDMQGGCFTISSLGGIGTTGFAPIVNAPEVAIMGLSRSSMKPVWNGKEFVPRLMLPMSLSFDHRVIDGADGARFITLINQYMSDLRRLVM
>NZ_CP046048.1|WP_004244080.1|3049100_3051767_-|pyruvate-dehydrogenase-(acetyl-transferring),-homodimeric-type
MSDMLKNDVDPIETRDWLQAIDSVIREEGVERAQFLIDQVLKQARNGGLDIALGGSVHSDYINTIPVEDEPAYPGNLELERRIRSAIRWNAVMMVLRASKKDLELGGHMASYQSSATLYEVCFNHFFRAHNDNDGGDLVYFQGHISPGIYARAFLEGRLTEEQLNNFRQEIGGKGLSSYPHPKLMPEFWQFPTVSMGLGPLSAIYQAKFLKYLDHRGLKDTTKQRVYAFLGDGEMDEPESKGAITIAVREKLDNLCFVVNCNLQRLDGPVTGNGKIVNELEGIFAGAGWNVIKVMWGDRWDALLRKDTSGKLIQLMNETLDGDYQTFKSRDGAYVREHFFNRYPETAALVKDMTDDEIWALNRGGHDPKKVFAAFQKAKETKDKPTVILAQTIKGYGMGETAEGKNIAHQVKKMNMDGVKHFRDRFNIPVSDEKVAELPYITFDKDSEEYKYLHARRQELEGYLPARRTRFDEKLEIPTLEDFSQLLEEQSKEISTTIAFVRALNVMLKNKSIKDRLVPIIADEARTFGMEGLFRQIGIYSPNGQQYTPQDREQVAYYKEDVKGQILQEGINELGAGASWLAAATSYSTNNLPMIPFYIYYSMFGFQRIGDLCWAAGDQQARGFLIGGTSGRTTLNGEGLQHEDGHSHIQSLTIPNCISYDPAFAYEVAVIMQDGLERMYGDKQENVYYYITTLNENYHMPAMPAGAEEGIRKGIYKLESLEGAKGKVQLLGSGSILRHVREAAQILSTEYGIGSDVYSVTSFTELARDGQDCERWNMLHPSEEPRVPYIAQIMNDAPAVASTDYMKLFAEQVRTYVPADDYRVLGTDGFGRSDSRENLRHHFEVDTSYVIVAALGELAKRGEIDVKVVEEAIKKYNINPEKVNPRLA
>NZ_CP046048.1|WP_110706929.1|3051930_3052701_-|pyruvate-dehydrogenase-complex-transcriptional-repressor-PdhR
MAYTKIRQPKLSDVIEQQLEHLILEGTLRPGEKLLPERELAKQFDVSRPSLREAIQKLEAKGFLLRRQGGGTFVQDNLWQSFSDPLAQLLSGHPESQFDLLETRHALEGIAAYYAALRGTDDDLERIKASHARIIDAHDKGDIAAESDAVLQYQLIVTEAAHNVVLLHLLRCMVPMLEQNIRQNFEFLYIRKEMLTAVSEHRTQIYQAIINREPEAAREASHRHLAFIEDVLLDMSREHTRRERSLRRLQQHPDLF
>NZ_CP046048.1|WP_060555638.1|3053027_3053570_-|1,6-anhydro-N-acetylmuramyl-L-alanine-amidase-AmpD
MEIKQGWLTGVKHVPSPNYDNRPEGEIPSLLIIHNISLPPGQFGGPYIDQLFTNTLAVDDHPFFNEIAHLRVSAHCLIRRDGEIVQYVPFTARAWHAGVSFYKGREKCNDFSIGIELEGTDECDFTLQQYQQLSTLTQQLIEHYPGIKENITGHSDVAPGRKTDPGPHFNWSYYRALLAK
>NZ_CP046048.1|WP_049203011.1|3053780_3054224_+|prepilin-peptidase-dependent-pilin
MNTLNYHSTENGFTLMELMIVIAIISILSSVALPAYHGYIQKAALTDVLQTLSPYRSAVELCHYEHQYNQCHADASFMPQQFRSRYLTDIHVANGVISAKGKAQLEGLTIVMTPAANSKETLPQWQINCTSTNTALQTLCHKVFKSH
>NZ_CP046048.1|WP_049203012.1|3054322_3055426_+|Flp-pilus-assembly-complex-ATPase-component-TadA
MNNTIHTATEFIEQLLRHSLAQRVSDLHLEPQQNSLRIRARIDNHLVLFSPPDNQLANEILTRLKILANINIAEKRLPQDGQFNWSYQKNNYSIRVATLPTLYGEKIVLRLMNNLQQPQLAQLGFQTIHLTLLKKYLTQPQGMILVTGPTGSGKTLTLYSCLQYLNKDNRNINSIEDPIELPLHGINQTQITEKAGITFATILRALLRQDPDVIMIGEIRDQQTAEIAIKAAQTGHLVLSTLHTNSTQATLARLANLGIAKDLIDSCVKLIISQRLVRCLCSDCKYQSPEQKNFIINNQQIILPNWQATGCQFCYSGYKGRTAIYDCFELAKQSLPSPYALFNSGIELIKKGITSLDEVYQVVGDIE
>NZ_CP046048.1|WP_001339197.1|3056128_3057337_+|IS4-like-element-ISVsa5-family-transposase
MCELDILHDSLYQFCPELHLKRLNSLTLACHALLDCKTLTLTELGRNLPTKARTKHNIKRIDRLLGNRHLHKERLAVYRWHASFICSGNTMPIVLVDWSDIREQKRLMVLRASVALHGRSVTLYEKAFPLSEQCSKKAHDQFLADLASILPSNTTPLIVSDAGFKVPWYKSVEKLGWYWLSRVRGKVQYADLGAENWKPISNLHDMSSSHSKTLGYKRLTKSNPISCQILLYKSRSKGRKNQRSTRTHCHHPSPKIYSASAKEPWVLATNLPVEIRTPKQLVNIYSKRMQIEETFRDLKSPAYGLGLRHSRTSSSERFDIMLLIALMLQLTCWLAGVHAQKQGWDKHFQANTVRNRNVLSTVRLGMEVLRHSGYTITREDLLVAATLLAQNLFTHGYALGKL
>NZ_CP046048.1|WP_060555640.1|3058237_3058852_+|dephospho-CoA-kinase
MTYTVALTGGIGSGKTTIANGFASLGVPLVDADVIARLVVEPDSPGLKALQQHFGDTILLPDGKLNRAQLRHIIFQNQQEKAWVNQLLHPLIQQETQKQIQQIRAPYFIWVVPLLVENKLTHLADRILVVDVTEEEQITRTMQRDGVSRDHVLKILQAQAKREQRLAVADDIIENHDNSLNQDEQIKRLHQHYLELAQKSNTGQ
>NZ_CP046048.1|WP_004250354.1|3058854_3059607_+|cell-division-protein-ZapD
MSEETSTIIFEHPLNEKMRSWLRIENSLIQLNSFQSINSLSSALSFFRAVSEFIEVLDRGEIRAELLKELEKRQKKLQQWLSFPNVDKEIVSHIINELSESACALSKAPRIGQHLKQDKIISLVKQRLSIPGGCCSFDVPTLHLWLNLPQTVRTEKLTCWQEGLYPLQNALNALLTLIRQSDTFKPVLSHSGFYQDSTEEGELLRIKLLASQQIYPQVSGHKNRYAIRFLPLDSEHGTIPSELPFEISCC

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

7424 : 70464

Enterobacteria_phage(23.08%)

tRNA,transposase,integrase

attL 9699:9714|attR 58420:58435

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012372820.1\|7424_8957_-\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_014342204.1\|9596_10145_+	cation:proton antiporter	NA	NA	NA	NA
9699:9714	attL	NA	NA	NA	NA
WP_012372818.1\|10225_10981_-	16S rRNA (guanine(1405)-N(7))-methyltransferase RmtB1	NA	NA	NA	NA
WP_000027057.1\|11150_12011_-	class A broad-spectrum beta-lactamase TEM-1	Q1MVP3	Enterobacteria_phage	4.6e-161	100.0
WP_001235713.1\|12193_12751_-	recombinase family protein	Q1MVP4	Enterobacteria_phage	7.0e-94	100.0
WP_001143760.1\|12914_15920_+\|transposase	Tn3-like element Tn3 family transposase	Q1MVP5	Enterobacteria_phage	0.0e+00	100.0
WP_000743213.1\|16412_16637_-	hypothetical protein	NA	NA	NA	NA
WP_175270765.1\|16633_17371_-	recombinase family protein	NA	NA	NA	NA
WP_000813355.1\|17584_18856_-\|transposase	IS4-like element ISPa13 family transposase	NA	NA	NA	NA
WP_052259183.1\|19158_20064_+	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(42)	NA	NA	NA	NA
WP_001067855.1\|20715_21420_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_071538080.1\|21444_23019_+	PAS domain-containing methyl-accepting chemotaxis protein	A0A1B0V854	Salmonella_phage	2.8e-87	99.4
WP_001276994.1\|23821_25489_-	AAA family ATPase	NA	NA	NA	NA
WP_000267723.1\|25485_27594_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_001029679.1\|27580_28402_-	TnsA endonuclease N-terminal domain-containing protein	NA	NA	NA	NA
WP_004246586.1\|28561_30388_-	glutamine--fructose-6-phosphate transaminase (isomerizing)	M1I9J5	Paramecium_bursaria_Chlorella_virus	1.2e-131	44.6
WP_004246587.1\|30545_31919_-	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	A0A0N7G7P8	Chrysochromulina_ericina_virus	9.6e-28	32.3
WP_004246588.1\|32069_32486_-	F0F1 ATP synthase subunit epsilon	NA	NA	NA	NA
WP_004246589.1\|32507_33890_-	F0F1 ATP synthase subunit beta	NA	NA	NA	NA
WP_004246591.1\|33924_34788_-	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA
WP_004246592.1\|34845_36387_-	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA
WP_004246594.1\|36401_36935_-	F0F1 ATP synthase subunit delta	NA	NA	NA	NA
WP_004246595.1\|36947_37418_-	F0F1 ATP synthase subunit B	NA	NA	NA	NA
WP_004246596.1\|37479_37719_-	F0F1 ATP synthase subunit C	NA	NA	NA	NA
WP_004246597.1\|37764_38589_-	F0F1 ATP synthase subunit A	NA	NA	NA	NA
WP_004246598.1\|38620_38998_-	F0F1 ATP synthase subunit I	NA	NA	NA	NA
WP_168725742.1\|39612_40239_-	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA	NA	NA	NA
WP_004246600.1\|40235_42134_-\|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	NA	NA	NA	NA
WP_004249871.1\|42513_42954_-	FMN-binding protein MioC	NA	NA	NA	NA
WP_004246603.1\|43054_43516_-	transcriptional regulator AsnC	NA	NA	NA	NA
WP_004246604.1\|43676_44669_+	aspartate--ammonia ligase	A0A1C9C5F0	Heterosigma_akashiwo_virus	1.3e-50	37.5
WP_049199595.1\|44669_46127_-	ATPase RavA stimulator ViaA	NA	NA	NA	NA
WP_004249869.1\|46134_47634_-	ATPase RavA	A0A0N9PBE1	Sulfolobus_monocaudavirus	1.1e-21	37.3
WP_060555976.1\|47914_48841_+	ribokinase	NA	NA	NA	NA
WP_012368605.1\|48922_50320_-	multidrug transporter subunit MdtD	NA	NA	NA	NA
WP_004249867.1\|50400_51087_-	FadR family transcriptional regulator	NA	NA	NA	NA
WP_017628596.1\|56983_57721_+	(Fe-S)-binding protein	NA	NA	NA	NA
WP_004246616.1\|57711_59130_+	iron-sulfur cluster-binding protein	NA	NA	NA	NA
58420:58435	attR	NA	NA	NA	NA
WP_012368603.1\|59133_59826_+	lactate utilization protein C	NA	NA	NA	NA
WP_110706855.1\|59844_61476_-	phosphoethanolamine transferase	NA	NA	NA	NA
WP_004246620.1\|61777_63433_-	cation acetate symporter	NA	NA	NA	NA
WP_004246621.1\|63429_63741_-	DUF485 domain-containing protein	NA	NA	NA	NA
WP_004249862.1\|63905_65864_-	acetate--CoA ligase	A0A2H4PQU7	Staphylococcus_phage	3.7e-89	39.1
WP_004249861.1\|66231_66855_+	superoxide dismutase [Mn]	Q56AR7	Bacillus_thuringiensis_phage	6.4e-64	58.5
WP_012368600.1\|66972_67647_+	6-N-hydroxylaminopurine resistance protein	NA	NA	NA	NA
WP_110706856.1\|67727_68144_-\|transposase	IS200/IS605 family transposase	A0A1S5RHE3	Helicobacter_phage	7.6e-45	62.8
WP_110706857.1\|68166_69375_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A1B0VCD8	Salmonella_phage	9.5e-189	81.0
WP_004246627.1\|69435_70464_-\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA

DBSCAN-SWA_2

100772 : 141482

Escherichia_phage(46.15%)

transposase,integrase

attL 95907:95921|attR 149097:149111

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
95907:95921	attL	NA	NA	NA	NA
WP_001218908.1\|100772_101957_+\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	3.4e-162	69.9
WP_119563495.1\|102801_103755_-	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_169774393.1\|103983_104788_-\|transposase	IS5 family transposase	A0A0M5M147	Mycobacterium_phage	4.4e-33	38.6
WP_000429836.1\|106756_107191_-	Hg(II)-responsive transcriptional regulator	NA	NA	NA	NA
WP_001294663.1\|107262_107613_+	mercuric transport protein MerT	NA	NA	NA	NA
WP_000732292.1\|107626_107902_+	mercury resistance system periplasmic binding protein MerP	NA	NA	NA	NA
WP_001340589.1\|107937_108360_+	organomercurial transporter MerC	NA	NA	NA	NA
WP_000105636.1\|108411_110106_+	mercury(II) reductase	A0A2K5B2C5	Erysipelothrix_phage	8.8e-39	27.6
WP_001277456.1\|110123_110486_+	mercury resistance co-regulator MerD	NA	NA	NA	NA
WP_000993386.1\|110482_110719_+	broad-spectrum mercury transporter MerE	NA	NA	NA	NA
WP_001300294.1\|110754_111423_+	EAL domain-containing protein	NA	NA	NA	NA
WP_001067855.1\|112812_113517_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000480968.1\|113577_114414_-	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	NA	NA
WP_001082319.1\|114413_115217_-	aminoglycoside O-phosphotransferase APH(3'')-Ib	Q75ZG1	Hepacivirus	4.9e-24	34.3
WP_001043265.1\|115277_116093_-	sulfonamide-resistant dihydropteroate synthase Sul2	NA	NA	NA	NA
WP_168725740.1\|116400_117252_-	replication protein C	NA	NA	NA	NA
WP_001067855.1\|118007_118712_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000018329.1\|118862_119678_+	aminoglycoside O-phosphotransferase APH(3')-Ia	A0A193DTG4	Autographa_californica_nuclear_polyhedrosis_virus	6.1e-163	100.0
WP_001067855.1\|119867_120572_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000027057.1\|121156_122017_+	class A broad-spectrum beta-lactamase TEM-1	Q1MVP3	Enterobacteria_phage	4.6e-161	100.0
WP_046788546.1\|126032_126434_+	hypothetical protein	NA	NA	NA	NA
WP_001067784.1\|126518_127223_-\|transposase	IS6-like element IS1006 family transposase	A0A077SL39	Escherichia_phage	1.9e-120	85.8
WP_001447541.1\|128147_129032_+	DUF3363 domain-containing protein	NA	NA	NA	NA
WP_000214122.1\|129254_130469_+	chloramphenicol/florfenicol efflux MFS transporter FloR	S4TR35	Salmonella_phage	1.2e-18	28.7
WP_001255015.1\|130496_130802_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_015344975.1\|130913_132407_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_001445143.1\|132437_132689_+	hypothetical protein	NA	NA	NA	NA
WP_001043260.1\|132971_133787_-	sulfonamide-resistant dihydropteroate synthase Sul2	NA	NA	NA	NA
WP_085940648.1\|133876_134966_+\|transposase	IS4 family transposase ISAba1	NA	NA	NA	NA
WP_006581703.1\|135163_135649_-	hypothetical protein	NA	NA	NA	NA
WP_000602738.1\|137459_138212_+\|transposase	IS6 family transposase	A0A077SL39	Escherichia_phage	2.4e-41	44.7
WP_000742814.1\|138633_139659_-	aminoglycoside O-phosphotransferase APH(4)-Ia	NA	NA	NA	NA
WP_001199192.1\|139887_140664_-	aminoglycoside N-acetyltransferase AAC(3)-IVa	NA	NA	NA	NA
WP_001067855.1\|140777_141482_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
149097:149111	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1282106 : 1290640

Mycobacterium_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004246075.1\|1282106_1283306_-	glycine betaine/L-proline ABC transporter ATP-binding protein ProV	G3M9Y6	Bacillus_virus	3.8e-28	37.6
WP_004247427.1\|1283914_1284883_-	class 1b ribonucleoside-diphosphate reductase subunit beta	R4TBI6	Mycobacterium_phage	3.5e-133	71.0
WP_004252248.1\|1284908_1287035_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	V9VI16	Lactococcus_phage	1.5e-205	51.3
WP_004246072.1\|1287063_1287468_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	R4JF54	Bacillus_phage	3.7e-12	38.5
WP_004246071.1\|1287479_1287704_-	glutaredoxin-like protein NrdH	V5UN81	Mycobacterium_phage	1.4e-13	47.9
WP_004246069.1\|1287985_1288459_+	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	NA	NA	NA
WP_004246068.1\|1288656_1288866_+	transcription antiterminator/RNA stability regulator CspE	A0A1W6JNX5	Morganella_phage	5.9e-22	74.2
WP_004246061.1\|1289168_1289657_-	hypothetical protein	NA	NA	NA	NA
WP_004246058.1\|1290265_1290640_-	fluoride efflux transporter CrcB	A0A2H4J148	uncultured_Caudovirales_phage	2.7e-25	52.0

DBSCAN-SWA_4

1330295 : 1375384

Morganella_phage(33.33%)

capsid,integrase,tail,lysis,terminase,tRNA

attL 1330209:1330227|attR 1373661:1373679

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1330209:1330227	attL	NA	NA	NA	NA
WP_159241546.1\|1330295_1331297_-\|integrase	tyrosine-type recombinase/integrase	Q9MCR4	Enterobacteria_phage	7.4e-70	44.0
WP_004246013.1\|1331253_1331499_-	excisionase	NA	NA	NA	NA
WP_168725584.1\|1332664_1333345_-	hypothetical protein	NA	NA	NA	NA
WP_017827452.1\|1333416_1333926_-	single-stranded DNA-binding protein	C6ZR36	Salmonella_phage	4.9e-54	57.3
WP_017827451.1\|1333925_1334537_-	ERF family protein	A0A1W6JP21	Morganella_phage	1.1e-73	69.2
WP_017628824.1\|1334538_1334859_-	hypothetical protein	NA	NA	NA	NA
WP_017628823.1\|1334855_1335008_-	hypothetical protein	NA	NA	NA	NA
WP_036919938.1\|1335004_1335268_-	hypothetical protein	NA	NA	NA	NA
WP_165439118.1\|1335275_1335431_-	hypothetical protein	NA	NA	NA	NA
WP_036919939.1\|1335484_1335745_-	hypothetical protein	NA	NA	NA	NA
WP_017628819.1\|1335944_1336442_+	hypothetical protein	NA	NA	NA	NA
WP_004245994.1\|1336463_1336781_-	hypothetical protein	A0A1W6JNZ0	Morganella_phage	7.1e-19	52.3
WP_036908285.1\|1337235_1337601_-	hypothetical protein	NA	NA	NA	NA
WP_036908283.1\|1337597_1338377_-	hypothetical protein	NA	NA	NA	NA
WP_036908281.1\|1338411_1339056_-	LexA family transcriptional regulator	A0A077KGZ5	Edwardsiella_phage	1.9e-79	65.0
WP_004247477.1\|1339161_1339371_+	helix-turn-helix transcriptional regulator	K7PKH4	Enterobacteria_phage	1.2e-25	83.3
WP_049256531.1\|1339516_1339864_+	hypothetical protein	A0A1W6JNY4	Morganella_phage	1.1e-36	72.9
WP_004251793.1\|1339959_1340133_+	hypothetical protein	NA	NA	NA	NA
WP_036895070.1\|1340129_1340897_+	helix-turn-helix domain-containing protein	A5LH71	Enterobacteria_phage	1.5e-22	51.9
WP_017628813.1\|1340896_1342282_+	AAA family ATPase	Q716D2	Shigella_phage	1.4e-114	47.7
WP_081215064.1\|1342303_1342639_+	hypothetical protein	A0A1C9LVV9	Vibrio_phage	2.3e-23	38.7
WP_036919942.1\|1342706_1343156_+	hypothetical protein	A0A2H4FNF5	Salmonella_phage	2.9e-13	32.2
WP_004245984.1\|1343234_1343525_+	DUF1364 domain-containing protein	A0A2H4JIC4	uncultured_Caudovirales_phage	7.2e-34	68.1
WP_004245983.1\|1343521_1343878_+	RusA family crossover junction endodeoxyribonuclease	G8C7V6	Escherichia_phage	3.2e-44	71.6
WP_004245982.1\|1343877_1344510_+	antitermination protein	I6PDF8	Cronobacter_phage	3.3e-23	34.3
WP_004247148.1\|1344821_1345343_+	DUF1440 domain-containing protein	NA	NA	NA	NA
WP_060555895.1\|1345501_1345924_+	hypothetical protein	NA	NA	NA	NA
WP_004247489.1\|1345977_1346247_+	hypothetical protein	A0A2H4FNF0	Salmonella_phage	6.0e-19	53.5
WP_017628809.1\|1346246_1346717_+	lysozyme	A0A1W6JNW4	Morganella_phage	4.4e-49	62.5
WP_012367623.1\|1346698_1346857_+	hypothetical protein	NA	NA	NA	NA
WP_012367624.1\|1346859_1347321_+\|lysis	lysis protein	A0A1P8DTG0	Proteus_phage	6.3e-24	45.8
WP_004247494.1\|1347668_1348253_+	Bro-N domain-containing protein	Q3LZN7	Bacteriophage	2.0e-22	48.2
WP_004245978.1\|1348452_1348611_+	hypothetical protein	NA	NA	NA	NA
WP_049257606.1\|1348641_1348905_+	hypothetical protein	NA	NA	NA	NA
WP_162837558.1\|1348947_1349109_+	hypothetical protein	NA	NA	NA	NA
WP_049199098.1\|1349101_1349284_+	hypothetical protein	A0A1W6JNV6	Morganella_phage	8.2e-20	74.1
WP_060556615.1\|1349300_1349726_+	hypothetical protein	A0A068CGC1	Acinetobacter_phage	1.1e-33	63.6
WP_064497288.1\|1349709_1350960_+\|terminase	terminase	A0A1V0E5Q3	Salmonella_phage	2.0e-202	78.7
WP_165469406.1\|1350959_1352315_+	DUF1073 domain-containing protein	H6WRT0	Salmonella_phage	1.2e-163	64.9
WP_064497286.1\|1352265_1353195_+\|capsid	minor capsid protein	A0A1V0E5Q2	Salmonella_phage	4.1e-91	56.0
WP_165469407.1\|1353198_1354476_+	hypothetical protein	A0A1V0E5Q9	Salmonella_phage	2.9e-167	69.6
WP_165469408.1\|1354475_1354925_+	hypothetical protein	I6S1Q2	Salmonella_phage	5.7e-46	68.5
WP_060556621.1\|1354937_1356032_+	hypothetical protein	G0ZND9	Cronobacter_phage	1.5e-145	68.6
WP_004247764.1\|1356041_1356215_+	hypothetical protein	I6R9A3	Salmonella_phage	1.4e-08	51.8
WP_165469409.1\|1356272_1356671_+	hypothetical protein	I6S619	Salmonella_phage	2.0e-55	78.8
WP_175270662.1\|1356670_1357012_+	hypothetical protein	A0A1W6JNW7	Morganella_phage	7.2e-25	53.4
WP_175270663.1\|1357013_1357385_+	HK97 gp10 family phage protein	G0ZNE3	Cronobacter_phage	8.6e-40	65.9
WP_175270664.1\|1357381_1357750_+	hypothetical protein	F1C5E4	Cronobacter_phage	6.4e-11	30.3
WP_063073751.1\|1357814_1358570_+	Ig-like domain-containing protein	A0A1W6JNT1	Morganella_phage	1.2e-107	80.1
WP_175270665.1\|1358619_1359312_+	hypothetical protein	A0A1W6JNX2	Morganella_phage	9.9e-90	71.5
WP_004245955.1\|1360214_1360376_-	toxin-antitoxin system HicB family antitoxin	NA	NA	NA	NA
WP_060556276.1\|1360489_1360747_+	Arc family DNA-binding protein	NA	NA	NA	NA
WP_060556275.1\|1360743_1361088_+	hypothetical protein	NA	NA	NA	NA
WP_060556274.1\|1361074_1361440_+	hypothetical protein	NA	NA	NA	NA
WP_063073753.1\|1361503_1361884_+	outer membrane protein assembly factor BamE	NA	NA	NA	NA
WP_175270666.1\|1361947_1365259_+	tape measure protein	A0A1W6JNU2	Morganella_phage	2.7e-177	42.3
WP_017827415.1\|1365274_1365475_+	hypothetical protein	NA	NA	NA	NA
WP_017827414.1\|1365476_1365788_-	hypothetical protein	NA	NA	NA	NA
WP_074924191.1\|1365932_1366262_+\|tail	phage tail protein	A0A1W6JNT2	Morganella_phage	1.3e-42	71.6
WP_049199072.1\|1366258_1366957_+\|tail	phage minor tail protein L	A0A1W6JNT8	Morganella_phage	1.8e-115	83.6
WP_175270667.1\|1366960_1367680_+	C40 family peptidase	A0A1W6JNU8	Morganella_phage	1.8e-110	74.0
WP_036935929.1\|1367616_1368183_+\|tail	tail assembly protein	A0A1W6JP03	Morganella_phage	1.4e-49	77.4
WP_175270668.1\|1368182_1371806_+	host specificity protein J	A0A1W6JNW2	Morganella_phage	0.0e+00	65.6
WP_175270669.1\|1371821_1373237_+	hypothetical protein	A0A1P8DTJ0	Proteus_phage	9.0e-114	54.0
WP_175270670.1\|1373241_1373472_-	DNA polymerase III subunit theta	A0A1P8DTI0	Proteus_phage	9.1e-32	90.8
WP_012367653.1\|1373716_1375384_+\|tRNA	glutamine--tRNA ligase	A0A222YZ70	Escherichia_phage	1.0e-286	85.0
1373661:1373679	attR	NA	NA	NA	NA

DBSCAN-SWA_5

1541424 : 1619932

Bacillus_phage(23.53%)

tRNA,plate,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004244558.1\|1541424_1541739_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	1.5e-13	44.1
WP_004244559.1\|1541769_1544064_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.3e-170	42.9
WP_004244560.1\|1544182_1544401_-	translation initiation factor IF-1	NA	NA	NA	NA
WP_004247616.1\|1544720_1545413_-\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_004244562.1\|1545414_1547166_-	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	W8CYL7	Bacillus_phage	4.0e-18	22.8
WP_017628444.1\|1547168_1548938_-	cysteine/glutathione ABC transporter permease/ATP-binding protein CydD	W8CYL7	Bacillus_phage	3.0e-21	23.5
WP_004247618.1\|1549076_1550036_-	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	1.2e-64	45.8
WP_004244566.1\|1550578_1551073_+	leucine-responsive transcriptional regulator Lrp	NA	NA	NA	NA
WP_175270673.1\|1551200_1554998_+	DNA translocase FtsK 4TM domain-containing protein	A0A218M9A2	Mycobacterium_phage	1.7e-90	49.3
WP_004244569.1\|1555110_1555716_+	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA
WP_110706932.1\|1555726_1557076_+	replication-associated recombination protein A	G3MBE0	Bacillus_virus	4.0e-79	40.6
WP_004244571.1\|1557209_1558499_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	4.1e-97	46.2
WP_004244572.1\|1558678_1559011_-	hypothetical protein	NA	NA	NA	NA
WP_004247622.1\|1559411_1560461_+	ureidoglycolate dehydrogenase	NA	NA	NA	NA
WP_168725593.1\|1560533_1561439_-	hypothetical protein	NA	NA	NA	NA
WP_004244575.1\|1561796_1562537_-	pyruvate formate lyase 1-activating protein	A0A2P0VNQ0	Tetraselmis_virus	2.3e-20	27.0
WP_004244576.1\|1562644_1564927_-	formate C-acetyltransferase	A0A2P0VNR5	Tetraselmis_virus	1.0e-159	41.6
WP_004244577.1\|1564981_1565836_-	formate transporter FocA	NA	NA	NA	NA
WP_036900836.1\|1566506_1568264_-	30S ribosomal protein S12 methylthiotransferase accessory factor YcaO	NA	NA	NA	NA
WP_004244579.1\|1568491_1569529_+	L-asparaginase 2	NA	NA	NA	NA
WP_108717050.1\|1569603_1570857_-	filamentous hemagglutinin N-terminal domain-containing protein	NA	NA	NA	NA
WP_104459796.1\|1570993_1572424_-	MFS transporter	A0A0M3UL24	Mycobacterium_phage	1.5e-07	24.8
WP_004244582.1\|1572560_1573649_+	3-phosphoserine/phosphohydroxythreonine transaminase	M1Q1P2	Streptococcus_phage	5.7e-84	47.0
WP_004252010.1\|1573845_1575132_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_004244585.1\|1575420_1576098_+	(d)CMP kinase	NA	NA	NA	NA
WP_004244586.1\|1576279_1577953_+	30S ribosomal protein S1	NA	NA	NA	NA
WP_004244587.1\|1578017_1578305_+	integration host factor subunit beta	A7KV42	Bacillus_phage	8.4e-11	40.0
WP_143475375.1\|1578729_1581099_+	DNA internalization-related competence protein ComEC/Rec2	Q0H255	Geobacillus_phage	3.6e-22	29.3
WP_004244589.1\|1581135_1582881_+	lipid A ABC transporter ATP-binding protein/permease MsbA	W8CYL7	Bacillus_phage	8.4e-61	30.9
WP_004244590.1\|1582877_1583879_+	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA
WP_004247631.1\|1584374_1584590_+	cold shock domain-containing protein	NA	NA	NA	NA
WP_004244593.1\|1585004_1585184_+	hypothetical protein	NA	NA	NA	NA
WP_004244594.1\|1585188_1585950_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA
WP_004247632.1\|1586072_1586903_-	envelope biogenesis factor ElyC	NA	NA	NA	NA
WP_004247633.1\|1587282_1588056_+\|tRNA	tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM	NA	NA	NA	NA
WP_004244597.1\|1588065_1589388_+	chromosome partition protein MukF	NA	NA	NA	NA
WP_004247634.1\|1589368_1590100_+	chromosome partition protein MukE	NA	NA	NA	NA
WP_004247635.1\|1590096_1594554_+	chromosome partition protein MukB	NA	NA	NA	NA
WP_004247636.1\|1594835_1595489_-	type A chloramphenicol O-acetyltransferase	G3CFL0	Escherichia_phage	8.2e-102	80.4
WP_004247637.1\|1595895_1596609_+	acid phosphatase AphA	NA	NA	NA	NA
WP_004247638.1\|1596951_1598667_+	L,D-transpeptidase	NA	NA	NA	NA
WP_168725594.1\|1598998_1599547_+	DUF882 domain-containing protein	NA	NA	NA	NA
WP_004247640.1\|1599596_1600247_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_004244607.1\|1600339_1600813_-	Hcp family type VI secretion system effector	NA	NA	NA	NA
WP_004247642.1\|1600903_1602640_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_004244609.1\|1602632_1603988_-	type VI secretion system ImpA family N-terminal domain-containing protein	NA	NA	NA	NA
WP_004244610.1\|1604025_1607574_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_110706694.1\|1607576_1609040_-	type VI secretion system protein TssA	NA	NA	NA	NA
WP_004244612.1\|1609045_1609696_-	type VI secretion system-associated protein TagO	NA	NA	NA	NA
WP_004244614.1\|1609697_1610486_-	hypothetical protein	NA	NA	NA	NA
WP_104459791.1\|1610489_1613213_-	type VI secretion system ATPase TssH	K4FB40	Cronobacter_phage	1.4e-83	30.5
WP_004244617.1\|1613221_1613977_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_026164596.1\|1613969_1615328_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_004244619.1\|1615329_1615881_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_004247648.1\|1615882_1617151_-	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA
WP_004244621.1\|1617155_1618193_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_046334530.1\|1618156_1619932_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA

DBSCAN-SWA_6

1788242 : 1864172

Enterobacteria_phage(19.12%)

capsid,integrase,tail,lysis,holin,protease,tRNA,terminase,portal,head

attL 1800378:1800401|attR 1838318:1838341

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_168725627.1\|1788242_1789346_-\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_004247118.1\|1789451_1789904_-	NUDIX hydrolase	NA	NA	NA	NA
WP_004247841.1\|1789896_1790526_-	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
WP_004247120.1\|1790664_1791918_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	1.6e-21	92.6
WP_049217409.1\|1792038_1793166_-\|integrase	phage integrase Arm DNA-binding domain-containing protein	O21925	Phage_21	2.8e-126	60.6
WP_036894694.1\|1793146_1793389_-	excisionase	NA	NA	NA	NA
WP_175270676.1\|1793453_1793984_-	HD family hydrolase	A0A1W6JP41	Morganella_phage	6.3e-52	58.0
WP_175270766.1\|1794067_1794940_-	recombination-associated protein RdgC	A0A1P8DTT8	Salmonella_phage	6.5e-62	48.1
WP_049255035.1\|1795633_1796359_-	transcriptional regulator	E7C9R0	Salmonella_phage	7.1e-30	35.5
WP_036900996.1\|1796427_1796661_+	helix-turn-helix domain-containing protein	A0A1B5FPK9	Escherichia_phage	2.2e-09	40.9
WP_036900998.1\|1796712_1797171_+	hypothetical protein	K7PJS5	Enterobacterial_phage	6.0e-27	50.8
WP_004247131.1\|1797258_1797468_+	hypothetical protein	NA	NA	NA	NA
WP_004247132.1\|1797457_1797637_+	DUF4222 domain-containing protein	A0A1W6JP38	Morganella_phage	1.1e-11	55.2
WP_108716954.1\|1797649_1798711_+	conserved phage C-terminal domain-containing protein	H2DE83	Erwinia_phage	7.9e-30	55.3
WP_036901006.1\|1798710_1799349_+	phage N-6-adenine-methyltransferase	Q8HA94	Salmonella_phage	1.1e-82	65.0
WP_064506369.1\|1799345_1799741_+	hypothetical protein	NA	NA	NA	NA
WP_175270677.1\|1799813_1800197_+	RusA family crossover junction endodeoxyribonuclease	A0A1C9IIA0	Salmonella_phage	3.3e-26	52.9
WP_071425693.1\|1800215_1801019_+	KilA-N domain-containing protein	A0A1W6JP13	Morganella_phage	1.3e-88	62.7
1800378:1800401	attL	NA	NA	NA	NA
WP_175270678.1\|1801015_1802041_+	DUF968 domain-containing protein	A0A1W6JP62	Morganella_phage	1.7e-85	47.7
WP_175270679.1\|1802068_1802464_+	antitermination protein	S5M7R9	Escherichia_phage	3.7e-33	57.9
WP_175270767.1\|1802617_1802851_+	hypothetical protein	NA	NA	NA	NA
WP_049210579.1\|1802992_1803187_+	hypothetical protein	NA	NA	NA	NA
WP_175270680.1\|1803260_1804280_+	site-specific DNA-methyltransferase	A0A1W6JP25	Morganella_phage	6.9e-132	67.4
WP_088206692.1\|1804593_1805163_+	hypothetical protein	NA	NA	NA	NA
WP_088207259.1\|1805454_1805760_+\|holin	holin	F1C5D1	Cronobacter_phage	5.1e-22	52.4
WP_104836860.1\|1805791_1806145_+	M15 family metallopeptidase	A0A1P8DTE2	Proteus_phage	6.7e-42	79.8
WP_175270681.1\|1806150_1806597_+\|lysis	lysis protein	M1FJ79	Enterobacteria_phage	2.4e-12	32.4
WP_175270682.1\|1807116_1807494_+	hypothetical protein	A0A1P8DTD7	Proteus_phage	1.3e-19	52.7
WP_070486613.1\|1808270_1808783_+	KilA-N domain-containing protein	A0A2H4FQV0	Salmonella_phage	4.3e-58	64.0
WP_070486615.1\|1808795_1809290_+	DUF1441 family protein	A0A291AWV8	Escherichia_phage	1.6e-49	66.3
WP_175270683.1\|1809286_1811389_+\|terminase	phage terminase large subunit family protein	A0A291AWY5	Escherichia_phage	5.0e-294	68.8
WP_004247869.1\|1811385_1811601_+	hypothetical protein	A5LH28	Enterobacteria_phage	1.2e-17	64.3
WP_064506398.1\|1811597_1813088_+\|portal	phage portal protein	K7PHM5	Enterobacterial_phage	1.1e-191	67.4
WP_175270684.1\|1813053_1815042_+\|protease	Clp protease ClpP	S5M7Q8	Escherichia_phage	6.3e-246	63.1
WP_175270685.1\|1815130_1815472_+	DUF2190 family protein	A5LH31	Enterobacteria_phage	3.9e-15	47.7
WP_063073894.1\|1815483_1815756_+	ATP-binding protein	K7PH43	Enterobacteria_phage	1.1e-15	46.1
WP_063073895.1\|1815765_1816329_+\|tail	phage tail protein	K7PMB7	Enterobacterial_phage	6.2e-50	57.1
WP_036973524.1\|1816328_1816724_+\|tail	phage tail protein	A0A2R9YJI2	Escherichia_phage	2.2e-41	59.5
WP_074153257.1\|1816735_1817257_+\|tail	phage tail protein	M9NYX0	Enterobacteria_phage	2.2e-65	74.7
WP_070486629.1\|1817268_1817658_+\|tail	phage minor tail protein G	K7PJY4	Enterobacterial_phage	8.2e-17	41.5
WP_083297149.1\|1817678_1817999_+\|tail	phage tail assembly protein T	K7P6V0	Enterobacteria_phage	5.7e-16	40.0
WP_175270686.1\|1817967_1820982_+\|tail	phage tail tape measure protein	K7PKI9	Enterobacteria_phage	3.0e-82	29.3
WP_110229326.1\|1820982_1821312_+\|tail	phage tail protein	A5LH39	Enterobacteria_phage	4.3e-27	53.7
WP_004247884.1\|1821406_1821982_+	zinc ribbon domain-containing protein	I6PDJ9	Cronobacter_phage	4.9e-18	34.1
WP_049206339.1\|1822034_1822739_+\|tail	phage minor tail protein L	A5LH40	Enterobacteria_phage	4.6e-66	50.6
WP_110229325.1\|1822760_1823489_+\|tail	phage tail protein	Q6H9T4	Enterobacteria_phage	2.3e-89	61.5
WP_049209898.1\|1823392_1824043_+\|tail	tail assembly protein	C6ZCZ4	Enterobacteria_phage	1.3e-46	46.3
WP_175270687.1\|1827788_1829177_+	hypothetical protein	A0A1P8DTJ0	Proteus_phage	7.3e-116	54.9
WP_071891016.1\|1829287_1830514_+	N-6 DNA methylase	NA	NA	NA	NA
WP_058336134.1\|1830520_1831177_-	hypothetical protein	NA	NA	NA	NA
WP_058336135.1\|1831173_1832295_-	DUF262 domain-containing protein	A0A0R6PKN1	Moraxella_phage	3.7e-17	26.6
WP_060556847.1\|1832800_1833934_-\|integrase	phage integrase Arm DNA-binding domain-containing protein	Q77Z04	Phage_21	1.0e-155	72.8
WP_017628380.1\|1833908_1834160_-	excisionase	NA	NA	NA	NA
WP_060556846.1\|1834245_1834770_-	hypothetical protein	A0A1W6JP41	Morganella_phage	1.0e-54	61.6
WP_049217153.1\|1835158_1835806_-	LexA family transcriptional regulator	K7PM82	Enterobacteria_phage	2.9e-75	65.1
WP_049217157.1\|1835909_1836104_+	hypothetical protein	H9C161	Pectobacterium_phage	6.5e-15	61.0
WP_060556845.1\|1836141_1836618_+	hypothetical protein	A0A1W6JP72	Morganella_phage	3.0e-45	60.4
WP_036976728.1\|1836680_1836890_+	hypothetical protein	NA	NA	NA	NA
WP_017628377.1\|1836879_1837059_+	DUF4222 domain-containing protein	A0A1W6JP38	Morganella_phage	3.4e-10	55.2
WP_060556894.1\|1837616_1838132_+	hypothetical protein	U5P0A0	Shigella_phage	3.5e-23	44.2
WP_060556844.1\|1838153_1838960_+	KilA-N domain-containing protein	A0A1W6JP13	Morganella_phage	1.8e-90	62.5
1838318:1838341	attR	NA	NA	NA	NA
WP_060556843.1\|1838956_1839982_+	DUF968 domain-containing protein	A0A1W6JP62	Morganella_phage	9.2e-84	46.5
WP_049219743.1\|1840009_1840408_+	antitermination protein	Q8W638	Enterobacteria_phage	1.6e-31	54.3
WP_004244726.1\|1840748_1840961_+	RNA chaperone/antiterminator CspA	A0A1W6JNX5	Morganella_phage	3.1e-26	81.4
WP_060556842.1\|1841292_1841751_+	Hsp20 family protein	NA	NA	NA	NA
WP_060556841.1\|1842244_1843060_+	DUF1837 domain-containing protein	NA	NA	NA	NA
WP_060556840.1\|1843049_1846157_+	DEAD/DEAH box helicase	NA	NA	NA	NA
WP_175270688.1\|1846587_1847010_+	hypothetical protein	NA	NA	NA	NA
WP_046334538.1\|1847063_1847333_+	bacteriophage protein	A0A2H4FNF0	Salmonella_phage	2.7e-19	53.5
WP_168725628.1\|1847332_1847803_+	glycoside hydrolase family protein	A0A1W6JNW4	Morganella_phage	4.7e-51	63.4
WP_175270689.1\|1847945_1848407_+\|lysis	lysis protein	A0A2H4JHL8	uncultured_Caudovirales_phage	1.1e-12	34.7
WP_168725631.1\|1848403_1848772_+	hypothetical protein	NA	NA	NA	NA
WP_168725632.1\|1849465_1849816_+	HNH endonuclease	A0A1P8DTD1	Proteus_phage	4.6e-59	92.9
WP_168725633.1\|1849812_1850214_+	hypothetical protein	NA	NA	NA	NA
WP_168725634.1\|1850404_1850899_+\|terminase	phage terminase small subunit P27 family	U5P067	Shigella_phage	4.5e-68	75.6
WP_168725635.1\|1850895_1852626_+\|terminase	terminase large subunit	Q8HAD6	Salmonella_phage	4.1e-294	82.3
WP_049212495.1\|1852635_1852815_+	hypothetical protein	S5FXQ9	Shigella_phage	1.7e-09	54.7
WP_168725636.1\|1852814_1854044_+\|portal	phage portal protein	Q8HAD4	Salmonella_phage	7.2e-176	72.2
WP_175270768.1\|1854021_1854666_+\|head,protease	HK97 family phage prohead protease	Q8HAD3	Salmonella_phage	8.1e-94	79.0
WP_168725638.1\|1854679_1855888_+\|capsid	phage major capsid protein	U5P0G9	Shigella_phage	1.1e-155	69.1
WP_063109140.1\|1855969_1856278_+\|head,tail	phage gp6-like head-tail connector protein	A0A1B5FP86	Escherichia_phage	4.8e-12	40.2
WP_168725639.1\|1856274_1856604_+\|head	phage head closure protein	NA	NA	NA	NA
WP_168725640.1\|1856593_1857067_+	HK97 gp10 family phage protein	A0A0R6PHU8	Moraxella_phage	1.6e-11	30.2
WP_109372567.1\|1857072_1857414_+	DUF3168 domain-containing protein	NA	NA	NA	NA
WP_109880550.1\|1857423_1858089_+	hypothetical protein	NA	NA	NA	NA
WP_088495854.1\|1858153_1858570_+	hypothetical protein	NA	NA	NA	NA
WP_175270690.1\|1858614_1858845_+	DUF4035 domain-containing protein	NA	NA	NA	NA
WP_168725641.1\|1858886_1862165_+\|tail	phage tail tape measure protein	A0A2I2L6P9	Escherichia_phage	2.5e-42	27.7
WP_161739356.1\|1862165_1862762_+	hypothetical protein	S4TSP7	Salmonella_phage	2.1e-51	52.8
WP_115370344.1\|1862761_1863343_+	hypothetical protein	Q7Y3Z7	Yersinia_phage	3.1e-52	50.0
WP_049219722.1\|1863359_1863695_+	hypothetical protein	Q775B6	Bordetella_phage	3.7e-10	35.3
WP_168725642.1\|1863773_1864172_+	hypothetical protein	A0A059VK01	Pseudomonas_phage	1.2e-31	46.2

DBSCAN-SWA_7

2667736 : 2686605

Burkholderia_phage(26.67%)

lysis,plate,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012368081.1\|2667736_2670175_+	molybdopterin-dependent oxidoreductase	A0A077SK27	Escherichia_phage	5.0e-261	54.5
WP_049213336.1\|2670186_2670804_+	dimethylsulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	4.4e-89	68.3
WP_004243611.1\|2670807_2671584_+	dimethyl sulfoxide reductase anchor subunit	A0A077SK59	Escherichia_phage	5.1e-42	39.8
WP_004243612.1\|2671699_2672242_-	DUF924 domain-containing protein	A0A1V0SIY0	Klosneuvirus	1.9e-19	34.7
WP_017628013.1\|2672810_2672990_+	GhoT/OrtT family toxin	NA	NA	NA	NA
WP_108716900.1\|2673129_2674365_-	hypothetical protein	Q6IWQ6	Burkholderia_phage	2.4e-14	34.1
WP_004243615.1\|2674370_2675027_-	DUF2612 domain-containing protein	Q6IWQ4	Burkholderia_phage	2.3e-35	39.9
WP_017628010.1\|2675023_2676211_-\|plate	baseplate J/gp47 family protein	A0A2H5BG53	Pseudoalteromonas_phage	1.9e-72	37.7
WP_004243617.1\|2676203_2676548_-	hypothetical protein	NA	NA	NA	NA
WP_004243621.1\|2676544_2677237_-	hypothetical protein	A0A2H4P6V3	Pseudomonas_phage	1.2e-29	35.7
WP_004243622.1\|2677239_2678052_-	hypothetical protein	Q6IWQ0	Burkholderia_phage	9.0e-42	39.2
WP_004243623.1\|2678020_2678341_-	hypothetical protein	NA	NA	NA	NA
WP_036971128.1\|2678346_2678841_-	hypothetical protein	NA	NA	NA	NA
WP_107337176.1\|2678843_2681147_-	hypothetical protein	A0A2H5BG44	Pseudoalteromonas_phage	2.0e-14	23.1
WP_004243627.1\|2681229_2681688_-	hypothetical protein	Q6IWV4	Burkholderia_phage	1.9e-25	48.5
WP_004243628.1\|2681747_2682200_-	hypothetical protein	NA	NA	NA	NA
WP_107337175.1\|2682210_2683698_-	DUF3383 domain-containing protein	A0A088C3U1	Shewanella_sp._phage	4.2e-77	35.5
WP_110706591.1\|2683706_2684219_-	hypothetical protein	NA	NA	NA	NA
WP_036918597.1\|2684255_2684705_-\|lysis	lysis protein	NA	NA	NA	NA
WP_110706590.1\|2684701_2685106_-	structural protein	A0A0E3JJ20	Enterobacteria_phage	1.1e-24	45.8
WP_168725667.1\|2685108_2685357_-\|holin	phage holin, lambda family	A0A1P8DTE4	Proteus_phage	8.9e-17	53.8
WP_036918599.1\|2685789_2686605_-	antitermination protein	M9NZB0	Enterobacteria_phage	2.1e-54	43.3

DBSCAN-SWA_8

3181390 : 3228897

Acinetobacter_phage(30.61%)

tail,holin,plate,terminase,head

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_049201132.1\|3181390_3182017_+	GrpB family protein	A0A2K5B2B6	Erysipelothrix_phage	4.4e-12	31.1
WP_004244239.1\|3182207_3182879_-	hypothetical protein	NA	NA	NA	NA
WP_175270707.1\|3184045_3184276_+	DNA polymerase III subunit theta	A0A1P8DTI0	Proteus_phage	4.8e-33	93.4
WP_156733215.1\|3184276_3184897_-\|tail	tail fiber assembly protein	NA	NA	NA	NA
WP_175270769.1\|3184896_3185352_-\|tail	tail fiber protein	M1TAS6	Escherichia_phage	4.2e-28	51.0
WP_175270708.1\|3186484_3187117_-	DUF2612 domain-containing protein	K4HYS2	Acinetobacter_phage	2.5e-47	49.0
WP_175270709.1\|3187116_3188307_-\|plate	baseplate J/gp47 family protein	E2GM17	Acinetobacter_phage	2.2e-76	40.4
WP_049206563.1\|3188303_3188657_-	hypothetical protein	I2GUF7	Acinetobacter_phage	9.4e-28	52.1
WP_175270710.1\|3188658_3189351_-\|plate	phage baseplate protein	A0A2R3UAK1	Myoviridae_environmental_samples	4.8e-28	41.4
WP_175270711.1\|3189331_3190219_-	hypothetical protein	E2GM20	Acinetobacter_phage	1.8e-59	40.8
WP_049206569.1\|3190205_3190481_-	hypothetical protein	A0A1X9SFF3	Acinetobacter_phage	6.4e-16	47.2
WP_175270712.1\|3190481_3191174_-	hypothetical protein	A0A1V0DZ59	Acinetobacter_phage	4.7e-47	54.4
WP_132587798.1\|3191269_3192640_-	Fic family protein	NA	NA	NA	NA
WP_175270713.1\|3192942_3193251_-	hypothetical protein	NA	NA	NA	NA
WP_175270714.1\|3193523_3193988_-	hypothetical protein	NA	NA	NA	NA
WP_175270715.1\|3194052_3196443_-	hypothetical protein	A0A1W6JPF2	Morganella_phage	3.0e-125	39.4
WP_175270716.1\|3196696_3197107_-	hypothetical protein	A0A068CGG2	Acinetobacter_phage	1.9e-19	40.7
WP_129037599.1\|3197106_3197553_-	hypothetical protein	A0A1V0DZ74	Acinetobacter_phage	9.7e-38	51.0
WP_175270717.1\|3197565_3199023_-	DUF3383 domain-containing protein	H9C0W5	Aeromonas_phage	1.0e-67	34.5
WP_175270718.1\|3199034_3199520_-	hypothetical protein	NA	NA	NA	NA
WP_175270719.1\|3199507_3199888_-	hypothetical protein	K4I3A0	Acinetobacter_phage	1.2e-23	42.6
WP_175270720.1\|3199874_3200333_-	hypothetical protein	A0A2I7R754	Vibrio_phage	2.2e-08	31.0
WP_175270770.1\|3200325_3200784_-	DUF4054 domain-containing protein	K4HYQ8	Acinetobacter_phage	9.7e-17	44.7
WP_175270721.1\|3200810_3201128_-	hypothetical protein	A0A1X9SFA9	Acinetobacter_phage	3.7e-07	33.0
WP_175270722.1\|3201187_3202186_-	DUF2184 domain-containing protein	I2GUD7	Acinetobacter_phage	1.6e-85	52.3
WP_175270723.1\|3202195_3202681_-	hypothetical protein	A0A219YBF2	Aeromonas_phage	1.2e-17	43.0
WP_175270724.1\|3202693_3203908_-	DUF2213 domain-containing protein	A0A1X9SFH3	Acinetobacter_phage	6.2e-55	55.5
WP_175270725.1\|3203920_3204712_-\|head	phage head morphogenesis protein	A0A0D4DCM6	Acinetobacter_phage	4.5e-54	40.5
WP_175270726.1\|3204683_3206216_-	DUF1073 domain-containing protein	A0A192RWX3	Acinetobacter_phage	4.7e-116	51.2
WP_175270727.1\|3206215_3207739_-\|terminase	phage terminase large subunit	Q7Y5U7	Haemophilus_phage	1.3e-129	49.9
WP_175270728.1\|3208328_3209015_-	Rha family transcriptional regulator	A0A192Y918	Salmonella_phage	1.2e-98	77.6
WP_175270729.1\|3209453_3209723_-	peptidase	Q8SBD8	Shigella_phage	9.3e-12	46.4
WP_175270730.1\|3209610_3209988_-	hypothetical protein	A0A1W6JP00	Morganella_phage	2.2e-06	32.5
WP_036976899.1\|3209989_3210322_-	M15 family metallopeptidase	F1BUL3	Cronobacter_phage	4.4e-35	70.3
WP_175270731.1\|3210308_3210602_-\|holin	phage holin family protein	NA	NA	NA	NA
WP_004916901.1\|3210598_3210988_-	membrane protein	S4TRS4	Salmonella_phage	4.2e-13	35.0
WP_175270732.1\|3211576_3212416_-	antitermination protein	H6WRZ1	Salmonella_phage	1.0e-56	43.8
WP_049199110.1\|3212412_3212604_-	hypothetical protein	A0A1P8DTD3	Proteus_phage	2.3e-28	95.2
WP_107336910.1\|3212756_3213350_-	recombination protein NinG	A0A1P8DTE0	Proteus_phage	3.7e-85	89.2
WP_159046734.1\|3213321_3213465_-	hypothetical protein	A0A1P8DTE6	Proteus_phage	2.7e-18	87.2
WP_175270733.1\|3213461_3214124_-	metallophosphoesterase	K7P721	Enterobacteria_phage	1.2e-73	62.3
WP_155120990.1\|3214120_3214264_-	hypothetical protein	NA	NA	NA	NA
WP_175270734.1\|3214266_3214710_-	recombination protein NinB	K7P7B8	Enterobacteria_phage	8.1e-37	54.6
WP_175270735.1\|3214786_3215086_+	hypothetical protein	NA	NA	NA	NA
WP_165894660.1\|3215172_3215337_-	hypothetical protein	NA	NA	NA	NA
WP_175270736.1\|3215382_3215592_-	hypothetical protein	NA	NA	NA	NA
WP_074561840.1\|3215578_3215806_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_152964332.1\|3215821_3215989_-	hypothetical protein	NA	NA	NA	NA
WP_175270737.1\|3216008_3217385_-	replicative DNA helicase	E5AGF0	Erwinia_phage	4.5e-158	59.0
WP_175270738.1\|3217384_3218482_-	replication protein	E5AGE9	Erwinia_phage	1.6e-102	56.5
WP_049199128.1\|3218474_3218654_-	hypothetical protein	G9L679	Escherichia_phage	2.9e-09	59.6
WP_175233712.1\|3218646_3218823_-	hypothetical protein	NA	NA	NA	NA
WP_175270739.1\|3218919_3219267_-	hypothetical protein	A0A1P8DTF0	Proteus_phage	4.9e-05	33.3
WP_071233781.1\|3219372_3219600_-	helix-turn-helix domain-containing protein	E5AGE7	Erwinia_phage	6.0e-20	67.6
WP_175270740.1\|3219704_3220430_+	helix-turn-helix transcriptional regulator	E7C9R0	Salmonella_phage	4.9e-47	42.6
WP_149127671.1\|3220667_3221012_+	hypothetical protein	NA	NA	NA	NA
WP_175270741.1\|3221658_3221895_+	hypothetical protein	A0A1P8DTK1	Proteus_phage	4.6e-07	84.8
WP_175270742.1\|3221910_3222498_-	hypothetical protein	NA	NA	NA	NA
WP_004245997.1\|3222769_3222952_+	host cell division inhibitory peptide Kil	A0A1P8DTH8	Proteus_phage	4.4e-21	85.0
WP_175270743.1\|3223079_3223334_+	hypothetical protein	A0A1P8DTG3	Proteus_phage	1.0e-39	98.8
WP_175270744.1\|3223330_3224149_+	PD-(D/E)XK nuclease-like domain-containing protein	A0A1P8DTH1	Proteus_phage	2.0e-158	97.1
WP_175270745.1\|3224141_3224948_+	recombination protein RecT	A0A1P8DTF2	Proteus_phage	3.3e-145	98.1
WP_175270746.1\|3225482_3225806_+	hypothetical protein	NA	NA	NA	NA
WP_175270747.1\|3225802_3226258_+	hypothetical protein	M1F3E2	Salmonella_phage	9.3e-12	27.8
WP_175270748.1\|3226333_3227047_+	hypothetical protein	NA	NA	NA	NA
WP_175270749.1\|3227093_3227348_+	hypothetical protein	NA	NA	NA	NA
WP_124725260.1\|3227340_3227709_+	hypothetical protein	NA	NA	NA	NA
WP_175270750.1\|3227872_3228046_+	hypothetical protein	NA	NA	NA	NA
WP_175270751.1\|3228038_3228362_+	DUF2591 domain-containing protein	A0A1P8DTH6	Proteus_phage	3.0e-33	73.3
WP_175270752.1\|3228351_3228897_+	phage N-6-adenine-methyltransferase	A0A1W6JP96	Morganella_phage	4.6e-58	62.6

DBSCAN-SWA_9

3491932 : 3500812

Caulobacter_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004245601.1\|3491932_3493501_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	7.2e-11	33.7
WP_012368337.1\|3493901_3494582_+	HAD-IB family hydrolase	NA	NA	NA	NA
WP_004245603.1\|3494678_3495254_-	TerD family protein	K4JRX3	Caulobacter_phage	1.2e-27	40.3
WP_004249446.1\|3495330_3495909_-	tellurium resistance membrane protein TerD	K4JRX3	Caulobacter_phage	2.4e-33	41.5
WP_004245605.1\|3495976_3497002_-	TerC/Alx family metal homeostasis membrane protein	K7QKE8	Escherichia_phage	1.3e-74	47.9
WP_004245607.1\|3497036_3497492_-	tellurite resistance TerB family protein	NA	NA	NA	NA
WP_143475448.1\|3497516_3498689_-	TerD family protein	NA	NA	NA	NA
WP_004245609.1\|3498689_3499274_-	TerD family protein	K4JRX3	Caulobacter_phage	4.2e-17	30.2
WP_017827550.1\|3499666_3500812_+	phosphoribosyltransferase domain-containing protein	A0A172Q0Y1	Acinetobacter_phage	1.2e-31	27.2

DBSCAN-SWA_10

3590356 : 3641522

Salmonella_phage(22.22%)

protease,integrase,transposase,holin

attL 3581883:3581897|attR 3643570:3643584

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3581883:3581897	attL	NA	NA	NA	NA
WP_109880364.1\|3590356_3592387_-\|protease	protease Lon-related BREX system protein BrxL	NA	NA	NA	NA
WP_060554886.1\|3592609_3595279_-	BREX-1 system phosphatase PglZ type A	NA	NA	NA	NA
WP_060554887.1\|3595278_3598896_-	BREX-1 system adenine-specific DNA-methyltransferase PglX	NA	NA	NA	NA
WP_060554888.1\|3599052_3602730_-	BREX system P-loop protein BrxC	NA	NA	NA	NA
WP_004249341.1\|3602748_3603333_-	DUF1788 domain-containing protein	NA	NA	NA	NA
WP_049194747.1\|3603329_3603929_-	DUF1819 family protein	NA	NA	NA	NA
WP_156868342.1\|3603938_3604865_-	WYL domain-containing protein	NA	NA	NA	NA
WP_001259346.1\|3607879_3608587_-	DsbC family protein	NA	NA	NA	NA
WP_000606835.1\|3608735_3614222_-	DUF4165 domain-containing protein	NA	NA	NA	NA
WP_000118520.1\|3614949_3615267_+	quaternary ammonium compound efflux SMR transporter SugE	NA	NA	NA	NA
WP_001221666.1\|3615263_3615797_-	lipocalin family protein	A0A1W6JNX6	Morganella_phage	6.1e-47	54.1
WP_175270758.1\|3615890_3617036_-	CMY-2 family class C beta-lactamase	NA	NA	NA	NA
WP_001339197.1\|3618136_3619345_+\|transposase	IS4-like element ISVsa5 family transposase	Q9E8P4	Bluetongue_virus	3.0e-235	100.0
WP_072156948.1\|3619685_3619880_+\|protease	omptin family outer membrane protease	NA	NA	NA	NA
WP_001520030.1\|3619984_3620704_-	hypothetical protein	NA	NA	NA	NA
WP_049218683.1\|3620804_3621098_-	YqjK-like family protein	NA	NA	NA	NA
WP_049218680.1\|3621775_3622975_-	lipoprotein-releasing ABC transporter permease subunit LolC	NA	NA	NA	NA
WP_049218678.1\|3623276_3623678_+	PPC domain-containing protein	NA	NA	NA	NA
WP_060555124.1\|3624094_3624496_-\|holin	phage holin family protein	NA	NA	NA	NA
WP_060555123.1\|3624577_3624931_-	hypothetical protein	NA	NA	NA	NA
WP_060555122.1\|3625002_3625251_-	DUF883 family protein	NA	NA	NA	NA
WP_060555121.1\|3625700_3626048_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_060555120.1\|3626047_3626347_+	XRE family transcriptional regulator	NA	NA	NA	NA
WP_060555126.1\|3626467_3626656_+	DUF5397 family protein	NA	NA	NA	NA
WP_060555119.1\|3626659_3626938_+	virulence factor	NA	NA	NA	NA
WP_060555118.1\|3627404_3628895_+	YadA-like family protein	S4TRP0	Salmonella_phage	4.6e-07	33.3
WP_060555117.1\|3629306_3629513_-	hypothetical protein	NA	NA	NA	NA
WP_060555116.1\|3629509_3630133_-	ParA family protein	A0A222ZPP5	Mycobacterium_phage	5.7e-12	31.8
WP_060555115.1\|3630601_3631120_-	ClbS/DfsB family four-helix bundle protein	NA	NA	NA	NA
WP_109880811.1\|3631370_3632021_-	hypothetical protein	NA	NA	NA	NA
WP_001520048.1\|3632062_3632371_-	hypothetical protein	NA	NA	NA	NA
WP_001352368.1\|3633348_3634557_+\|transposase	IS4-like element ISVsa5 family transposase	A0A0F7LAS3	uncultured_marine_virus	1.8e-235	100.0
WP_004249335.1\|3634840_3635749_-	DNA polymerase III subunit epsilon	A0A2H4P6W5	Pseudomonas_phage	2.8e-07	27.5
WP_156868445.1\|3636237_3636390_-	hypothetical protein	NA	NA	NA	NA
WP_004249334.1\|3636388_3636838_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A218MND2	uncultured_virus	4.1e-36	57.1
WP_036973679.1\|3636845_3638114_+	translesion error-prone DNA polymerase V subunit UmuC	I6RSM4	Salmonella_phage	1.2e-141	60.2
WP_008305549.1\|3638124_3638568_-	hypothetical protein	NA	NA	NA	NA
WP_000497807.1\|3639032_3640007_+	ParM/StbA family protein	NA	NA	NA	NA
WP_004249313.1\|3640009_3640279_+	hypothetical protein	NA	NA	NA	NA
WP_004249312.1\|3640280_3641522_+\|integrase	integrase family protein	A0A291AWU1	Escherichia_phage	3.8e-76	39.1
3643570:3643584	attR	NA	NA	NA	NA

DBSCAN-SWA_11

4145046 : 4161194

Stx2-converting_phage(22.22%)

transposase,integrase

attL 4134613:4134625|attR 4156176:4156188

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4134613:4134625	attL	NA	NA	NA	NA
WP_000080195.1\|4145046_4146660_-\|transposase	IS66-like element ISEc23 family transposase	A0A0P0ZEB3	Stx2-converting_phage	3.0e-182	63.6
WP_000624711.1\|4146690_4147041_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	4.0e-39	65.5
WP_000981822.1\|4147037_4147442_-\|transposase	transposase	Q6H9S5	Enterobacteria_phage	1.4e-30	84.3
WP_096043063.1\|4147404_4148421_+\|transposase	IS5-like element IS5 family transposase	Q38213	Escherichia_phage	7.0e-185	99.1
WP_000412211.1\|4149540_4150200_+	type A-1 chloramphenicol O-acetyltransferase	G3CFL0	Escherichia_phage	8.4e-131	100.0
WP_000656305.1\|4150400_4150778_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_001138064.1\|4150844_4153811_-\|transposase	Tn3-like element TnAs3 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	73.6
WP_000147567.1\|4153813_4154374_-	recombinase family protein	A0A1B0V7I5	Salmonella_phage	4.0e-49	86.2
WP_000454193.1\|4154499_4154850_-	DUF3330 domain-containing protein	NA	NA	NA	NA
WP_000845039.1\|4155052_4156066_-\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
WP_001083725.1\|4156210_4156708_+	trimethoprim-resistant dihydrofolate reductase DfrA12	A0A0A0PL85	Bacillus_phage	7.5e-23	40.9
4156176:4156188	attR	NA	NA	NA	NA
WP_001336345.1\|4156819_4157110_+	DUF1010 domain-containing protein	NA	NA	NA	NA
WP_001206356.1\|4157115_4157907_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2	NA	NA	NA	NA
WP_000679427.1\|4158070_4158418_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
WP_175270761.1\|4158411_4159248_+	dihydropteroate synthase	NA	NA	NA	NA
WP_000050481.1\|4159652_4161194_+\|transposase	IS91 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP046048

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection