CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP053808	Vibrio cholerae strain SP7G chromosome 1, complete sequence	2 crisprs	cas3,DEDDh,DinG,csx1,csa3,cas6f,cas7f,cas5f	0	4	5	0
NZ_CP053809	Vibrio cholerae strain SP7G chromosome 2, complete sequence	0 crisprs	csx1,cas3,RT,csa3	0	0	1	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP053808_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053808_1

1882341-1882549

TypeI-A

Consensus_repeat	Method
TTTTCTTGGCTGCCTATTCGGCAGAACAC	CRT
TTTCTTGGCTGCCTATTCGGCAGAACAC	CRISPRCasFinder
TTTCTTGGCTGCCTATTCGGCAGAACAC	PILER-CR

3 spacers

csa3,cas6f,cas7f,cas5f

The CRISPR arrays of NZ_CP053808_1

>merge|NZ_CP053808|1|1882341-1882549|CRT,CRISPRCasFinder,PILER-CR
TATTCTTGGCTGCCTATTCGGCAGAACACGGTACGTGCAAGCCAAAGTCACAATGCAAACTTTTCTTGGCTGCCTATTCGGCAGAACACGTATACATCGGTGATACAAACGTTGGCGACAATTTCTTGGCTGCCTATTCGGCAGAACACATAAAGGCAATGATGACCATCCACGCGTCAGTTTTCTTGGCTGCCTATTCGGCAGAACAC

>NZ_CP053808|1|1|1882341-1882549|CRT
TATTCTTGGCTGCCTATTCGGCAGAACAC	GGTACGTGCAAGCCAAAGTCACAATGCAAAC
TTTTCTTGGCTGCCTATTCGGCAGAACAC	GTATACATCGGTGATACAAACGTTGGCGACA
ATTTCTTGGCTGCCTATTCGGCAGAACAC	ATAAAGGCAATGATGACCATCCACGCGTCAG
TTTTCTTGGCTGCCTATTCGGCAGAACAC

>NZ_CP053808|1|1|1882342-1882549|CRISPRCasFinder
ATTCTTGGCTGCCTATTCGGCAGAACAC	GGTACGTGCAAGCCAAAGTCACAATGCAAACT
TTTCTTGGCTGCCTATTCGGCAGAACAC	GTATACATCGGTGATACAAACGTTGGCGACAA
TTTCTTGGCTGCCTATTCGGCAGAACAC	ATAAAGGCAATGATGACCATCCACGCGTCAGT
TTTCTTGGCTGCCTATTCGGCAGAACAC

>NZ_CP053808|1|1|1882343-1882549|PILER-CR
TTCTTGGCTGCCTATTCGGCAGAACACG	GTACGTGCAAGCCAAAGTCACAATGCAAACTT
TTCTTGGCTGCCTATTCGGCAGAACACG	TATACATCGGTGATACAAACGTTGGCGACAAT
TTCTTGGCTGCCTATTCGGCAGAACACA	TAAAGGCAATGATGACCATCCACGCGTCAGTT
TTCTTGGCTGCCTATTCGGCAGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053808.1\|WP_175242644.1\|1892101_1893286_-\|restriction-endonuclease-subunit-S	unknown	unknown	gnl\|CDD\|341174
NZ_CP053808.1\|WP_114717059.1\|1883295_1884327_-\|type-I-F-CRISPR-associated-protein-Csy3	cas7f	cd09737_cas7f_CAS-I-F	gnl\|CDD\|187868
NZ_CP053808.1\|WP_071180311.1\|1875864_1877973_-\|type-I-secretion-system-permease/ATPase	unknown	unknown	gnl\|CDD\|273831
NZ_CP053808.1\|WP_071180312.1\|1875362_1875845_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053808.1\|WP_069212616.1\|1887745_1888429_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053808.1\|WP_175242643.1\|1888447_1892062_-\|DEAD/DEAH-box-helicase-family-protein	unknown	unknown	gnl\|CDD\|226581
NZ_CP053808.1\|WP_175242645.1\|1893282_1894890_-\|SAM-dependent-DNA-methyltransferase	unknown	unknown	gnl\|CDD\|223363
NZ_CP053808.1\|WP_000149592.1\|1862235_1862733_-\|dual-specificity-protein-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|350355
NZ_CP053808.1\|WP_114717058.1\|1884333_1886421_-\|hypothetical-protein	cas5f	cd09736_cas5f_CAS-I-F	gnl\|CDD\|187867
NZ_CP053808.1\|WP_080483384.1\|1879344_1881435_-\|type-I-secretion-system-permease/ATPase	unknown	unknown	gnl\|CDD\|273831
NZ_CP053808.1\|WP_175242646.1\|1895955_1897338_-\|DEAD/DEAH-box-helicase-family-protein	unknown	unknown	gnl\|CDD\|223989
NZ_CP053808.1\|WP_071180302.1\|1895092_1895959_+\|GIY-YIG-nuclease-family-protein	unknown	unknown	gnl\|CDD\|198394
NZ_CP053808.1\|WP_000936745.1\|1863844_1864186_-\|metalloregulator-ArsR/SmtB-family-transcription-factor	csa3	COG0640_csa3_CAS-I-A	gnl\|CDD\|236654
NZ_CP053808.1\|WP_071178732.1\|1881766_1882246_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053808.1\|WP_175242642.1\|1864730_1873886_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|380205
NZ_CP053808.1\|WP_175242641.1\|1860967_1862191_-\|organoarsenical-effux-MFS-transporter-ArsJ	unknown	unknown	gnl\|CDD\|340883
NZ_CP053808.1\|WP_071178730.1\|1877977_1879342_-\|HlyD-family-type-I-secretion-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|130902
NZ_CP053808.1\|WP_071180310.1\|1882645_1883284_-\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	cas6f	cd09739_cas6f_CAS-I-F:CAS-IV	gnl\|CDD\|187870
NZ_CP053808.1\|WP_000985837.1\|1862746_1863748_-\|ArsJ-associated-glyceraldehyde-3-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|169599
NZ_CP053808.1\|WP_114717057.1\|1886423_1887635_-\|TniQ-family-protein	unknown	unknown	gnl\|CDD\|377670

Protein	Function_ID	Function_description	E-value
NZ_CP053808.1\|WP_000149592.1\|1862235_1862733_-\|dual-specificity-protein-phosphatase-family-protein	gnl\|CDD\|350355	cd14505, CDKN3-like, cyclin-dependent kinase inhibitor 3 and similar proteins. This family is composed of eukaryotic cyclin-dependent kinase inhibitor 3 (CDKN3) and related archaeal and bacterial proteins. CDKN3 is also known as kinase-associated phosphatase (KAP), CDK2-associated dual-specificity phosphatase, cyclin-dependent kinase interactor 1 (CDI1), or cyclin-dependent kinase-interacting protein 2 (CIP2). It has been characterized as dual-specificity phosphatase, which function as a protein-serine/threonine phosphatase (EC 3.1.3.16) and protein-tyrosine-phosphatase (EC 3.1.3.48). It dephosphorylates CDK2 at a threonine residue in a cyclin-dependent manner, resulting in the inhibition of G1/S cell cycle progression. It also interacts with CDK1 and controls progression through mitosis by dephosphorylating CDC2. CDKN3 may also function as a tumor suppressor; its loss of function was found in a variety of cancers including glioblastoma and hepatocellular carcinoma. However, it has also been found over-expressed in many cancers such as breast, cervical, lung and prostate cancers, and may also have an oncogenic function.	2.50982e-59
NZ_CP053808.1\|WP_071180311.1\|1875864_1877973_-\|type-I-secretion-system-permease/ATPase	gnl\|CDD\|273831	TIGR01846, type_I_sec_HlyB, type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. [Protein fate, Protein and peptide secretion and trafficking].	0
NZ_CP053808.1\|WP_114717057.1\|1886423_1887635_-\|TniQ-family-protein	gnl\|CDD\|377670	pfam06527, TniQ, TniQ. This family consists of several bacterial TniQ proteins. TniQ along with TniA and B is involved in the transposition of the mercury-resistance transposon Tn5053 which carries the mer operon. It has been suggested that the tni genes are involved in the dissemination of integrons.	4.31425e-11
NZ_CP053808.1\|WP_175242643.1\|1888447_1892062_-\|DEAD/DEAH-box-helicase-family-protein	gnl\|CDD\|226581	COG4096, HsdR, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms].	0
NZ_CP053808.1\|WP_175242645.1\|1893282_1894890_-\|SAM-dependent-DNA-methyltransferase	gnl\|CDD\|223363	COG0286, HsdM, Type I restriction-modification system methyltransferase subunit [Defense mechanisms].	1.77212e-55
NZ_CP053808.1\|WP_114717059.1\|1883295_1884327_-\|type-I-F-CRISPR-associated-protein-Csy3	gnl\|CDD\|187868	cd09737, Csy3_I-F, CRISPR/Cas system-associated RAMP superfamily protein Csy3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; predicted Cas7 ortholog.	2.01581e-151
NZ_CP053808.1\|WP_114717058.1\|1884333_1886421_-\|hypothetical-protein	gnl\|CDD\|187867	cd09736, Csy2_I-F, CRISPR/Cas system-associated RAMP superfamily protein Csy2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; predicted Cas5 ortholog.	2.75098e-20
NZ_CP053808.1\|WP_175242644.1\|1892101_1893286_-\|restriction-endonuclease-subunit-S	gnl\|CDD\|341174	cd17285, RMtype1_S_Csp16704I_TRD2-CR2_like, Type I restriction-modification system specificity (S) subunit Target Recognition Domain-ConseRved domain (TRD-CR), similar to Campylobacter species RM1670 S subunit (S.Csp16704I) TRD2-CR2, Aeromonas media WS S subunit (S.AmeWSORF2351P) TRD1-CR1, and Clostridium carboxidivorans P7 S subunit (S.CcaPORF573P) TRD2-CR2. Campylobacter species RM16704 S subunit (S.Csp16704I ) recognizes 5'... ACANNNNNNNNTCG ... 3', and the recognition sequences of Aeromonas media WS TRD1-CR1 S subunit (S.AmeWSORF2351P) and Clostridium carboxidivorans P7 S subunit (S.CcaPORF573P) are undetermined. The restriction-modification (RM) system S subunit consists of two variable target recognition domains (TRD1 and 2) and two conserved regions (CR1 and CR2) which separate the TRDs. The TRDs each bind to different specific sequences in the DNA. RM systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The host genome is protected from cleavage by methylation of specific nucleotides in the target sites. In type I systems, both restriction and modification activities are present in one heteromeric enzyme complex composed of one DNA specificity (S) subunit (this family), two modification (M) subunits and two restriction (R) subunits. This model contains both TRD1-CR1 and TRD2-CR2. It may also include TRD-CR-like sequence-recognition domains of various type II restriction enzymes and methyltransferases and type I DNA methyltransferases.	1.3887e-87
NZ_CP053808.1\|WP_175242646.1\|1895955_1897338_-\|DEAD/DEAH-box-helicase-family-protein	gnl\|CDD\|223989	COG1061, SSL2, DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair].	2.17561e-30
NZ_CP053808.1\|WP_071180302.1\|1895092_1895959_+\|GIY-YIG-nuclease-family-protein	gnl\|CDD\|198394	cd10447, GIY-YIG_unchar_2, GIY-YIG domain of uncharacterized hypothetical protein found in bacteria and archaea. The family includes a group of uncharacterized hypothetical proteins, mainly found in bacteria and a few found in archaea, with a GIY-YIG domain that shows statistically significant similarity to the N-terminal catalytic domains of GIY-YIG family of intron-encoded homing endonuclease I-TevI and catalytic GIY-YIG domain of nucleotide excision repair endonuclease UvrC.	9.88045e-37
NZ_CP053808.1\|WP_000936745.1\|1863844_1864186_-\|metalloregulator-ArsR/SmtB-family-transcription-factor	gnl\|CDD\|236654	PRK10141, PRK10141, DNA-binding transcriptional repressor ArsR; Provisional.	2.94409e-27
NZ_CP053808.1\|WP_080483384.1\|1879344_1881435_-\|type-I-secretion-system-permease/ATPase	gnl\|CDD\|273831	TIGR01846, type_I_sec_HlyB, type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. [Protein fate, Protein and peptide secretion and trafficking].	0
NZ_CP053808.1\|WP_175242642.1\|1864730_1873886_-\|hypothetical-protein	gnl\|CDD\|380205	NF033203, entero_EhxA, enterohemolysin EhxA. Members of this family are the RTX toxin called enterohemolysin or EhxA, because it is found in enterohemorrhagic Escherichia coli (EHEC) strains such as O157:H7.	3.43682e-19
NZ_CP053808.1\|WP_175242641.1\|1860967_1862191_-\|organoarsenical-effux-MFS-transporter-ArsJ	gnl\|CDD\|340883	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters. This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.10728e-15
NZ_CP053808.1\|WP_071178730.1\|1877977_1879342_-\|HlyD-family-type-I-secretion-periplasmic-adaptor-subunit	gnl\|CDD\|130902	TIGR01843, Hemolysin_secretion_protein_D_plasmid, type I secretion membrane fusion protein, HlyD family. Type I secretion is an ABC transport process that exports proteins, without cleavage of any signal sequence, from the cytosol to extracellular medium across both inner and outer membranes. The secretion signal is found in the C-terminus of the transported protein. This model represents the adaptor protein between the ATP-binding cassette (ABC) protein of the inner membrane and the outer membrane protein, and is called the membrane fusion protein. This model selects a subfamily closely related to HlyD; it is defined narrowly and excludes, for example, colicin V secretion protein CvaA and multidrug efflux proteins. [Protein fate, Protein and peptide secretion and trafficking].	1.62925e-111
NZ_CP053808.1\|WP_071180310.1\|1882645_1883284_-\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	gnl\|CDD\|187870	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6f is an endoribonuclease that generates crRNA; This family is specific for CRISPR/Cas system I-F subtype; Possesses RRM fold; also known as Csy4 family.	5.45979e-49
NZ_CP053808.1\|WP_000985837.1\|1862746_1863748_-\|ArsJ-associated-glyceraldehyde-3-phosphate-dehydrogenase	gnl\|CDD\|169599	PRK08955, PRK08955, glyceraldehyde-3-phosphate dehydrogenase; Validated.	0

>NZ_CP053808.1|WP_071178732.1|1881766_1882246_-|hypothetical-protein
MYLKRLEAIDVNFNHYEVGLERYVRCTWALNMYRHHVFRANLPDTFVLEINRINESLGIAVETIDLKEYRDNFRSSEKINKSIKENEYPRWIWFYGVEVLRDTNYAGWLRSRLTVRSIENLRVIFVVESSDDYRDVFCDYRVPFYQSTTLLQTNIDDLN
>NZ_CP053808.1|WP_080483384.1|1879344_1881435_-|type-I-secretion-system-permease/ATPase
MALSRSAVVSSQVLLKLMGVSYQVPKEHTGDDLKSWLKNASGQTDGQLRLKRLKEKKLAASHLPLAYQQHDGEFVVLARLSDDQALIQRHHEHVPQVISRTTLQEVWAGQVIQYHESGRQFDIRWFIPEFLRYKKLLSSVLFFSFLLQLLALISPLFFQVVMDKVLVHANISTLDVLAVVLVIVGVYEVLLKGLREYLFAHTTNRIDIQLGGKLFGHLLSLPLIYFKTRQVGSIVARVRELSSIRDFLTSSAMTLSVDVAFSVVFFAVMGWLSFPLMVMVVSTIPVYFILAWVTGAHLHKAVERQFSCGAKNTSFVTESVSGIQTMKSLAIEPAMRRKWQGQVEDFAHANFDTQKITAVTNQIVQLVQKLTAVLVIWAGAMQVMALEMTIGQLIAFNMLLSHVHQPLGKLVDLWQQFIQTRVGIDALGDMLNLPPETEHSSVQVDGVSGNIQLRNVVFSYQPKSPAVLKSIDLSIRAGETIGIVGPSGSGKSTITRLIQKLYLPVSGSIHIDGIDLATISSSSLRQHIGVVLQENYLFNKTVRENICLKKPTADLEEIIKAAKLAGAHDFILKLPMGYDTVLAEGGASLSGGQRQRVAIARALLGDPKVLIFDEATSALDDESQEVIQNNMSAISQGRTVVIIAHRLSTVRSCDRIITVEAGQVTSQGSHEELVAQNGIYRRLWQLQQAKQQEERE
>NZ_CP053808.1|WP_071178730.1|1877977_1879342_-|HlyD-family-type-I-secretion-periplasmic-adaptor-subunit
MAGIIEKIQPLKKKRQAPLDERYEFLPSYLEVVEKPASPLAKTSAWAISSLLIAALVWSIVGKLDIFASASGQVIVSSRSKVIEPFVQGEVEEILVKEGDRVHQGDVLIKLNPIGAEAERARIASQIDFTLLEISRYQALLGDELPALWLDPNVGSEELLNASRMAIQSDWQERQAQLEGISAELDVNLANQLAVRNELSSLALLRNNVEERLDARKILMESKSIARMEVLDLEKELLDTQRAVFQQQSQLKVLQAEEKKLKDSRTTYLAGLKKDYHHRLNELQGQYQGLAQELVKANNAIRQQVLLAPVNGTVQQLQVNTLGGVVQPAEELMVIVPEDALLEVEAKLLNKDVGFVIPGQTVEVKIDTFPYTKYGTVPADVVHVSRDAVKDEQFGMVFPVRIRLQKDNIKVEENLVPLQPGMTVVAEIKTGQRRVIEYLLSPLQQYQSEAMRER
>NZ_CP053808.1|WP_071180311.1|1875864_1877973_-|type-I-secretion-system-permease/ATPase
MIVTDLHPTLDVLCELANDYELAPDSSQLAHRLGKNDNSIDEIDLCRAALWSGLQARVVEANIDELQALPLPALVLMDEQWRLVKRISPKTVEIVDQHRRLNLEVEAFKLTYQGKVLVARANFQAKEKTAFGFGWFIPAIKKHKRQFSWVIGVSLMIQLIALVSPLLFQNVIDKVLVSRSLSSLEVLGVAMLGLAVMGPLYGLLRSWLFSNLSSKIGAELSSKLYDHLTALPLSYFNERQTGQIIARMKEMDSIRQFLTGSGLTLILDLAFIGLFIGVMLMYSSLLTSVVVISLVLYFLFWILVGKGLRTRVNHAFEAEADATAMLTESVMGIETVKTTATEWRFNKHWQEQLAHFTKASFAATNYGNWAGQGICLIQKLTAALLLWLGVKLVLDGALTSGELVAFNMFAGHVTQPILRLAQIWQDFQHTLISLRRVGDILDVETESGSEGLASVAPLKGKVAFDNVRFRYCEQSPDVLRGLSITIEPGEFVGITGPSGSGKSTLTKLLQRLYSPTQGQVLIDGLDLAIADPVQLRRQMSVVLQESHLFSGTVAENIRLNCPEASDEDVRNAAELAGVIDFIGDLPQGFNSPVGEKGALLSGGQRQRIALARALISNPSVLILDEATSALDYESEAAIMSNMTKICEGRTVISIAHRLGTIKNADRILVINDGRISEEGEHNFLIQEQGLYKHLWDLQSGSS
>NZ_CP053808.1|WP_071180312.1|1875362_1875845_-|hypothetical-protein
MKLSNKPFFLEVVSIFVAVFCVVYMLYVERYFSGPVTVSDVEYYHVIYFEDVDEGKGPIRNKLKTKDNGKSIVVDYYPFNLFSDEQRNDIKVGVVNHLGGDNIYYLVSLDVLGVQIIDPKISIFELNEKNKTQQEEIIYLFITALTIIIFVRLIKLNLNV
>NZ_CP053808.1|WP_175242642.1|1864730_1873886_-|hypothetical-protein
MSNFTDLTHFLNISDVYIKEEHHRLNDAFSSIISLLESIIDQLEELLDEEPDDEKPDEDGDGIPDDEEQDSDNDGIPDDIDPDQDGDNDPNNHDDDSGSTGGEGGTQGDAVHEGSNNSDRQRRIDPLVLDLDGDGLDFLSLDNSQAKFDLTGNSFATHSSWLSGDDGFLAIDKNNDGSINNIDELFGREDITGFEELELLDSNGDGKISTEDAAFEQLLIWQDKNGDGSSTQEELKKLSDYNITEIGLDRSASGAEKNDVLLEEVGHYVTVDANGNRQEYLLGDVLFSTRPTYSEFVGEVTLTDAAKAIANIQGYGMMPDLNAAMSLNKEFEAQILQFTRDLSSQTLTSGFDDILYGWAGSKGLTLADIDSTPNLSADENGLVRFPNANITLSIEQLGVLKAYTGINTLEIGDGIWNANGQTHTTGQLYLEAWNSIRANLVTKFAVSQGLLDHLIPSVTYDAASDTLQSTFDFKSRADATFQKVTSKLGNLKTANDAAELLLVLDVFEQFESGFSKTQKECVIDLIKSAEPAAYDWLANNIDLVKKIDNSILLGTNTQGGSAADFAIGSKGNDIINTGGGNDIVEGGLGNDTLHGGDGNDRVSGGEGDDSLTVSYSGSNTLDGGAGDDVLTVETPRDSGRYNVSYQTANNANNTLIGGTGNDRLVGGIGAERYEFNRGDGHDTIRDRDVYGTSIDQIILGEGIAREELSLRRDGNHMVLLIGGPDSGDSITIEEGYVNSEYQIEEIVLSDGSTVSPQLLPVLSSTEADTLRGGYFTDVLDGREGDDILYGEGGDDTLDGGQGDDVLDGGAGNDRLNAGDGNDTVMAGAGNDVVEGGLGNDTLHGGDGNDRVSGGEGDDSLTVSYSGSNTLDGGAGDDVLTVETPRDSGRYNVSYQTANNANNTLIGGTGNDRLVGGIGAERYEFNRGDGHDTIRDRDVYGTSIDQIILGEGIAREELSLRRDGNHMVLLIGGPDSGDSITIEEGYVNSEYQIEEIVLSDGSTVSPQLLPVLSSTEADTLRGGYFTDVLDGREGDDILYGEGGDDTLDGGQGDDVLDGGAGNDRLNAGDGNDTVMAGAGNDVVEGGLGNDTLHGGDGNDRVSGGEGDDSLTVSYSGSNTLDGGAGDDVLTVETPRDSGRYNVSYQTANNANNTLIGGTGNDRLVGGIGAERYEFNRGDGHDTIRDRDVYGTSIDQIILGEGIAREELSLRRDGNHMVLLIGGPDSGDSITIEEGYVNSEYQIEEIVLSDGSTVSPQLLPVLSSTEADTLRGGYFTDVLDGREGDDILYGEGGDDTLDGGQGDDVLDGGAGNDRLNAGDGNDTVMAGAGNDVVEGGLGNDTLHGGDGNDRVSGGEGDDSLTVSYSGSNTLDGGAGDDVLTVETPRDSGRYNVSYQTANNANNTLIGGTGNDRLVGGIGAERYEFNRGDGHDTIRDRDVYGTSIDQIILGEGIAREELSLRRDGNHMVLLIGGPDSGDSITIEEGYVNSEYQIEEIVLSDGSTVSPQLLPVLSSTEADTLRGGYFTDVLDGREGDDILYGEGGDDTLDGGQGDDVLDGGAGNDRLNAGDGNDTVMAGAGNDMVEGGLGNDTLHGGDGNDRVSGGEGDDSLTVSYSGSNTLDGGAGDDVLTVETPRDSGRYNVSYQTANNANNTLIGGTGNDRLVGGIGAERYEFNRGDGHDTIRDRDVYGTSIDQIILGEGIAREELSLRRDGNHMVLLIGGPDSGDSITIEEGYVNSEYQIEEIVLSDGSTVSPQLLPVLSSTEADTLRGGYFTDVLDGREGDDILYGEGGDDTLDGGQGDDVLDGGAGNDRLNAGDGNDTVMAGAGNDVVEGGLGNDTLHGGDGNDRVSGGEGDDSLTVSYSGSNTLDGGAGDDVLTVETPRDSGRYNVSYQTANNANNTLIGGTGNDRLVGGIGAERYEFNRGDGHDTIRDRDVYGTSIDQIILGEGIAREELSLRRDGNHMVLLIGGPDSGDSITIEEGYVNSEYQIEEIVLSDGSTVSPQLLPVLSSTEADTLRGGYFTDVLDGREGDDILYGEGGDDTLDGGQGDDVLDGGAGNDRLNAGDGNDTVMAGAGNDVVEGGLGNDTLHGGDGNDRVSGGEGDDSLTVSYSGSNTLDGGAGDDVLTVETPRDSGRYNVSYQTANNANNTLIGGTGNDRLVGGIGAERYEFNRGDGHDTIRDRDVYGTSIDQIILGEGIAREELSLRRDGNHMVLLIGGPDSGDSITIEEGYVNSEYQIEEIVLSDGSTVSPQLLPVLSSTEADTLRGGYFTDVLDGREGDDILYGEGGDDTLDGGQGDDVLDGGAGNDRLNAGDGNDTVMAGAGNDMVEGGLGNDTLHGGDGNDRVSGGEGDDSLTVSHSGSNTLDGGAGDDVLTVETPRDSGRYNVSYQTANNANNTLIGGTGNDRLVGGIGAERYEFNRGDGHDTIRDRDVYGTSIDQIILGEGIAREELSLRRDGNHMVLLIGGPDSGDSITIEEGYVNSEYQIEEIVLSDGSTVSPQLLPVLSSTEADTLRGGYFTDVLDGREGDDILYGEGGDDTLDGGQGDDVLDGGAGNDRLNAGDGNDTVMAGAGNDMVEGGLGNDTLHGGDGNDRVSGGEGDDSLTVSYSGSNTLDGGAGDDVLTVETPRDSGRYNVSYQTANNANNTLIGGTGNDRLVGGIGAERYEFNRGDGHDTIRDRDVYGTSIDQIILGEGIAREELSLRRDGNHMVLLIGGPDSGDSITIEEGYVNSEYQIEEIVLSDGSTVSPQLLPVLSSTEADTLRGGYFTDVLDGREGDDILYGEGGDDTLDGGQGDDVLDGGAGNDRLNAGDGNDTVMAGAGNDVVEGGLGNDTLHGGDGNDRVSGGEGDDSLTVSYSGSNTLDGGAGDDVLTVETPRDSGRYNVSYQTANNANNTLIGGTGNDRLVGGIGAERYEFNRGDGHDTIRDRDVYGTSIDQIILGEGIAREELSLRRDGNHMVLLIGGPDSGDSITIEEGYVNSEYQIEEVVLGEGSKVSPFDLPDYVEPVINTDLLVQAMGAFDTRESVTNNAVIDSVTSSFSPSLVVSGQIQL
>NZ_CP053808.1|WP_000936745.1|1863844_1864186_-|metalloregulator-ArsR/SmtB-family-transcription-factor
MLPHQFFKLLADETRVRCLLMIAREEKVCVAELTEALNESQPKISRHLALLRASGVVVDIRQGQWVFYRISDQLPGWMRKQIQGLVESNCLKQEYQQDIQRLAEMTSRPQCCV
>NZ_CP053808.1|WP_000985837.1|1862746_1863748_-|ArsJ-associated-glyceraldehyde-3-phosphate-dehydrogenase
MAIKVGINGFGRIGRLALRASFDWPEIEFVQINDVAGDAATLAHLLEFDSVQGRWHHAVSSEADAILINGKRIRTTQEKAIDAVDWSGCDVVIEATGKHRKGEFLNQYLAQGVKRVVVSAPVKEEGIANIVVGVNDHIFNPEQHRIVTAASCTTNCIAPVVKVIHEKLGIAQASFTTIHNLTNTQTILDAPHKDLRRARACGMSLIPTTTGSAKAIIEIFPDLKGKIDGHAVRVPLANASLTDIIFDVERDTTVEEINQLLKQASENELKGILGFEERPLVSIDYQGDQRSTIVDALSTMVVGKRMVKIYAWYDNEMGYATRTAELVRKVGLA
>NZ_CP053808.1|WP_000149592.1|1862235_1862733_-|dual-specificity-protein-phosphatase-family-protein
MTHPTWELPVADSQASLVLTPCPGTKGTPLSESIAQLKAQGVSAVVTALSHEEMELHGVGELPAEVEKAGLQWFHAPIEDDCAPDAAFAQDWQQCSPALHQALSRGEKVALHCMGGSGRTGLLAAHLLLEKGWPLESIITQVQALRPGAFTKEVQVQYVHQIVKP
>NZ_CP053808.1|WP_175242641.1|1860967_1862191_-|organoarsenical-effux-MFS-transporter-ArsJ
MLSQLNAHVRQYMLVTFNYWNFTLTDGALRMLVVLYFYDLGYSSLAIASLFLFYEFFGVVTNLIGGWLGARLGLNRTMNIGLGLQIIALLMLAVPASWLTIPWVMAAQALSGIAKDLNKMSAKSAIKTLVPENAQGALFKWIAILTGSKNALKGAGFFLGGALLSLIGFQYAVAAMAAVLVLVFIGSVMSLKSDLGKAKNKPKFSDIFSKSASVNILSAARLFLFGARDVWFVIALPIYLGSVFGWDHSAVGGFLALWVIGYGVIQGFAPKITGSKSEHPPAGRAAIGWALALSSVTGLIAYGVQIQWHPEVVIIGGLMLFGAVFAVNSSLHSYLIVSYAKDDGVSLDVGFYYMANAMGRLIGTILSGWVFQLWGLAACLWVSFGFLVLTTLISFWLPNRASQVNLK
>NZ_CP053808.1|WP_071180310.1|1882645_1883284_-|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4
MSQRYYFLIRYTNANADYGLLAGRCISQMHLFMVNHHQAMNRVGVSFPDWNESSVGQTIAFVSEDKEMMIGLSFQPYFSLMVNEGLFEISSVYEVPDTSEEVRFVRNQTIGKNFLGSKKRRIKRSMARAELFGIEQSLPVTNEDRVIDSFHRIPISSGSSRQDFILFIQKELADERAESGFNSYGFATNQEKRATVPDLRFNSFDEDSFLVH
>NZ_CP053808.1|WP_114717059.1|1883295_1884327_-|type-I-F-CRISPR-associated-protein-Csy3
MELCTQLNYVRSLSAGKAYFYYLSESGDMCPLNVDRTRLRAPKGSYSEAYKGNKFVDKNVAPQDLAYSNPQFIEECYVKPGVDEIYCAFSLRIRANSLTPDICSDDEVRSKLSMFAKIYKELNGYKELANRYAKNILLGTWLWRNRECRNITIEVTTSELDTFVVEHAQKLSWYGHWDGDSTECLERLTAYLERALSDPTEYFYMDVKAKMRVGWGDEVYPSQEFLDSREDGIPTKQLATVELLSGKETVAFHGQKVGAALQSIDDWWHEEADKPLRVNEYGADREYVIARRHVTYGNDFYQLLRNTENWIESMTASESIPNDVHFIMSVLIKGGLFNCAKAN
>NZ_CP053808.1|WP_114717058.1|1884333_1886421_-|hypothetical-protein
MTKLSDLLAIEDEAIKQAALKKMFMPYTEDVCVDGYEQETLTILLNLSSSHQADRCSDWLDVARAQRYFKDRENLDASLAEIQWFHTHNLKFPDCRVKDQRIIARPLSTAEEFISSAVLDQRLGWAHNSAVYRHTLWLLNPFKWQSQPMCILSLIQQKNPVWLDLLTEFGLDVKSLARLQRAIEEQLPENSFPDSVSTYSKQLRFPWGDDYVSITPVVSHALQCELEIRARSPENKFSFVSSSLPNSASIGNLCGSLGGYMRVLNYPLGVKQAKGGTLTGNRQKSGHYFDDYQVTNAKICQVLNRLIGSEPSKTQRQRERARKVRSKILRKQIALWMLPLIELRDIAESEPNQQQLEHDDTLAQAFLSLPEWELGSLASEFNRRLHLTFQNNMYSAKFAYHPKLMQVAKAQVTWVLEQLSKPINNQDTVTGEQYIYLSSMRVQDAVAMSNPCLCGVPSLTAIWGFMHDYQRQFNQLVNNDSPVEFSSFAFYVRNENIQSTAKLTEPNSVAKARTVSNAKRPTIRSERLSDLEIDLVIRVHSESRISDFRSALKTALPVAFAGGALYQPQLSMQIEWLRTFTGRSELFHVLKGLPAYGRWLYPSEKQPTNFDELERLLTQNDDNLPVSLGYHLLEHPTKRDNAITGCHAYAENAIGLAKQVNPIEVRFSGRDHFLNHAFWSIECSSETILIKNYRD
>NZ_CP053808.1|WP_114717057.1|1886423_1887635_-|TniQ-family-protein
MNTDIQLYPDESLESFLLRLSQEQGYERFSHFAEDIWFDTMDQHEAIPGAFPLELNRINIYHAQTTSQMRVRVLIHLENQLKLNNFGALRLALSHSKAQFSPEYKAVHRLGADYPFVFLGQRFTPICPLCISEAPYIRQQWQFLSQQACERHGCKLVHHCPECQSRLEYQTTESISQCECGFELRNSPVEDAPVAALLVARWLSGNDSKPLGLLKAEMTLSERYGFLLWYVNRYGDIENISFESFVEYCSCWPRVLKEELDELVNKADLIRIKDWKKTFFNEVFGALLKDCRQLPSRQLERNSVLTQVLAYFTKLMATLPLSSKGNVGDVLLSPLEVSTLLSCTTDEVYRLYEFAEIKAAIRPRMHTKIASHESAFTLRSVIETKLTRMCSENDGLSVYLPEW
>NZ_CP053808.1|WP_069212616.1|1887745_1888429_-|hypothetical-protein
MSYLYEYIDELLRLQSRAVEKFKHTGVLGDAREEFLRYQINERLDHVDGRLHKGEVFYQNIEHGQHDIILRRKGTVNPCIGNQVRICSTECVAIIEVKTNAKLTEIRDFERKSKQLKIHNENLLCGMFCYKINGQTSTVLARSGYIFDREYQMFEPDDSKKEYSSIDFIICLDDEEEVNGLSHSKEPIVYSKGFCLVRDSSSYKLFKAPPYSKTLFQEMMRADQSKP
>NZ_CP053808.1|WP_175242643.1|1888447_1892062_-|DEAD/DEAH-box-helicase-family-protein
MSDTVDSKGAQGGSNFAFMDIAIKGDDLFSSRCAEIQTRAKNAERNIKTDPRIAGFYARNALELMVETVFDIDNWLTRPRHDVALMSLIHDSGFKQNLTTNLFPKLKLVIKLGNEAVHSKTTLPQRDALQAVKELHHVLYWYIRTYTPNLDRSKFVVPPFDEALIPQQVSIDAAVATKALSSIKRVQELEKLLEQADKVEREAYLKQLKENEALKAANQALLEQIEQAKQSAEKVTDAHDYNEAETRTYLIDVLLHEAGWKLEHKRDREYPVSGMPISQANPNGNGFVDYVLWGDDGTALAVVEAKRTHRRAEDGQQQAKLYADCLEKQCGVRPVIFYTNGYETYLWDDHFYPPRQVQGFYTKAELELMVKRRTDRKPFFENGQPNSNLVINNDITNRHYQKSAITKLLQDFELEHERKGLFVMATGTGKTRTVISLVDLLVKNNWVKNILFLADRNALLTQAKKNFVKLLPRVSCSILDSSQSKDNIDSRLYFSTYPTMKNLLDRGANERPFGVGHFDLIVVDEAHRSVYSKYRQIFEYFDGFLLGLTATPKDEVEKDTYGIFDLQKGMPTYAYEDEKAYDQGYLVPPTKISVATKFLREGVKYKDLSPEEQEEWENKAELQDRDEVLPSEVNKFLFNEDTAEKMFAQLMSKDGHGGIHVEGGDVIGKTIIFAANNDHALFLEKMFNKNYPKWAGKLARVITFKETYAQSLIDEFSGDENERKDFDPKNPTCRIAISVDMLDTGIDVPEVVNLVFFKVVRSKVKFTQMIGRGTRLCKDLFGPNDDKKTFKVFDYCQNFEYFDANPEGLPVGVAKPVTQQVFEKRVLLSTLLNSKLNNEDFREQNPEDYERYFELNRYQLDMLHHIVSGMNLDNFIVRPKRRAIEPFLDRKYWDNIDDAKFSELENQISQLPTEAEAFNSDEQLNHLSHRFDSLVLTMQLDLLEKGMISETIRGRVIEFAEQLEAKSTIPAVQAQLPLIQDVQTQEFWQDIHLVTLEELRRKLRNLMFALDKDKKEMVYTNFEDEVQGVHDVTNVYKNPSVDLAQYRKKIELYIQDHQDHLTIQKLKRNKAITQADLDVLEGLLLEASGISDVETYREKILQEKPLGTFIRQLVGLDQNAAREAFSAFLDEASYNAEQIEFIDQVIDYLVNNGILDMSRLFEPPFTDNHGESAYGFFDEGTVVELFGVIRKVNANAVVAESQSA
>NZ_CP053808.1|WP_175242644.1|1892101_1893286_-|restriction-endonuclease-subunit-S
MSWSNVALSTLVDIKGGGTPSKANPEYWNGSIPWASVKDFKSSDLNGASDYITQEGIDNSATSLIPRGNLIVPTRMALGKIAINSVDIAINQDLKALIIKDESVVDTEYLFRCIQSKSEEIVRQGKGATVKGITVDVLKNLQIPLPPLETQKQIAAVLEKADQLRKDCKLLEQELNSLAQSVFIDMFGDPVTNPKGWDLKFLSSLGEVKGGLQVTSKRSVNPISVPYLRVANVYRDHLELEEVKEIQVTDKELKSVLLEKGDVLFVEGHGNANEVGRAAVWNNEIPQCVHQNHLIRFRPGPAIRPEFLSAFVNSASGRRQLLQMSKTTSGLNTLSTSNIKSIQVLVPPLQKQDEYLAFLASSKAQQWVNGQLSIELDENFNALMQKAFKGDLTL
>NZ_CP053808.1|WP_175242645.1|1893282_1894890_-|SAM-dependent-DNA-methyltransferase
MLTGKIRNQIDQVWEMFWTGGVANPISVIEQISYLLFIRRLDELQKTAERRSQATGLPLNNPTFGPDEQALRWSNFKDKDPDVMMEIVRDRVFPKIKTLQNEGSFAEHMKDAIFMIPSAKLLDQVVQLLSAINMDDKDTKGDLYEYLLSKLQQSGVNGQFRTPRNIIRMMVELMQPKVGDTICDPSSGTCGFLMAAVEYVEEHHAKEVNKPENRKHFNNEMFTGFDFDRHMLRIGAMNMLLHGIENPSVHYRDSLQDQGSENISEAYSLILANPPFKGSVDFDIVAPDLLRALGKNPIVKKSAPKFKTEIDEDGNEIQVEVKQKGPTEKSELLFLALILRMLKVGGRAAVIVPDGVLFGSTKSHQSIREKIVNEQKLEAVISLPSGVFKPYAGVSTAILIFTKTNSGGTDNVWFYDMQADGYSLDDKRTPLFKEGEVPTHEQSNIADIIARFKTLTNADNTPNRDSPEYQRNKTEQSFMVPVSNITNNDFDLSINRYKEVVYEEVQYDSPKEILGRIKTLQEKMAKGVVELEKLL
>NZ_CP053808.1|WP_071180302.1|1895092_1895959_+|GIY-YIG-nuclease-family-protein
MTRGTQLKIYLANGSVTGIRHAEIVNWTGQAIAVPRVHIKELSEWEETHRPGVYFLFGYNAESGNSLVYVGEAEHIQKRLSQHLASKEFWNEAICFTNKDENLTKAHVKYLEARLIKIIVESKRYDLDNDKLPPASSLPRGERDAMETFIDNIRTVIGSLGHKLLEPRVSLTSPSQTNEPENTVLQLKVKKVDAKAMLTDEGIVVLKGSQALTIAQPSLSKGYAKLRSNLEEKGILTPSGDHLVAAEDILFTSASQAAAVLLGYPCSGPDYWRDTSGKTLKEIEAESV
>NZ_CP053808.1|WP_175242646.1|1895955_1897338_-|DEAD/DEAH-box-helicase-family-protein
MLRAWQADCAERAINKFASNRRPHFFCQATPGAGKTVMAAEVARRLFEEGMIDLVLCFSPSLSVAEGMQKTFAWKLECSFNGGLGSLGGSYTYQFIRFFDDNFWNTISKHRVLVVFDEIHHCSFEEDGRSNSWGVEIVSKIQGLARYTLALSGTPWRSDRLPIVMAEYSDPEGMLICDYQYGLKQAVVDGVCRQPKIVLIDNEHLSITSGGNRQHFASILDCLKQSDISYQSVIHNEEAMHYILNSACKKLAQIRELSPNAGGLVVAASIKHAKDIQKRLVEQFNQSASIVTYHHVNPLNEIESFRHSNVQWIVSVGMISEGTDIPRLQVCCHMSSVKTELYFRQVLGRILRVNDSMNQEAWLYTFAEESLIGFAERIEQDIPDTCMFLKQEEGAQNVADEPISLSSTVSDRIQSSYSQPSTLSWENIAAVIESNNTNNALLYDELRLGQFKQRVIAAFT

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP053808_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053808_2

2495505-2495748

Orphan

Consensus_repeat	Method
AAAATGTGCCTCCTTAGCTCAGTCGGTAGAGCAACGGACTGATAATCCG	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP053808_2

>merge|NZ_CP053808|2|2495505-2495748|PILER-CR
TGTGCCGGCTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCGCCAGTTCGATTCCGGCAGCCGGCACCACTTAAAATTTGCCTCGATAGCTCAGTCGGTAGAGCAGAGGATTGAAAATCCTCGTGTCGGTGGTTCGATTCCGCCTCGAGGCACCATTATTAAAAGTTGTGCCATAGACACAATAAAAATTGTTCCTCCTTAGCTCAGTCGGTAGAGCGACGGACTGTTAATCCG

>NZ_CP053808|2|2|2495505-2495748|PILER-CR
TGTGCCGGCTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGG	TCGCCAGTTCGATTCCGGCAGCCGGCACCACTTAAAA
TTTGCCTCGATAGCTCAGTCGGTAGAGCAGAGGATTGAAAATCCTCGTG	TCGGTGGTTCGATTCCGCCTCGAGGCACCATTATTAAAAGTTGTGCCATAGACACAATAAAAAT
TGTTCCTCCTTAGCTCAGTCGGTAGAGCGACGGACTGTTAATCCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053808.1\|WP_175242716.1\|2499721_2502073_+\|LPS-assembly-protein-LptD	unknown	unknown	gnl\|CDD\|235158
NZ_CP053808.1\|WP_000780521.1\|2502125_2503421_+\|peptidylprolyl-isomerase-SurA	unknown	unknown	gnl\|CDD\|236758
NZ_CP053808.1\|WP_175242715.1\|2496037_2497663_+\|cache-domain-containing-protein	unknown	unknown	gnl\|CDD\|223910
NZ_CP053808.1\|WP_114808231.1\|2494146_2495274_+\|membrane-bound-lytic-murein-transglycosylase-MltC	unknown	unknown	gnl\|CDD\|183271
NZ_CP053808.1\|WP_175242712.1\|2488903_2489506_+\|XTP/dITP-diphosphatase	unknown	unknown	gnl\|CDD\|234648
NZ_CP053808.1\|WP_175242717.1\|2505694_2506504_+\|symmetrical-bis(5'-nucleosyl)-tetraphosphatase	unknown	unknown	gnl\|CDD\|234673
NZ_CP053808.1\|WP_000973542.1\|2506653_2507151_-\|type-3-dihydrofolate-reductase	unknown	unknown	gnl\|CDD\|365932
NZ_CP053808.1\|WP_000124738.1\|2493772_2494045_+\|oxidative-damage-protection-protein	unknown	unknown	gnl\|CDD\|180059
NZ_CP053808.1\|WP_175242714.1\|2492697_2493759_+\|A/G-specific-adenine-glycosylase	unknown	unknown	gnl\|CDD\|182805
NZ_CP053808.1\|WP_000383338.1\|2505303_2505684_+\|Co2+/Mg2+-efflux-protein-ApaG	unknown	unknown	gnl\|CDD\|180098
NZ_CP053808.1\|WP_044126932.1\|2503410_2504403_+\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	unknown	unknown	gnl\|CDD\|234696
NZ_CP053808.1\|WP_175242713.1\|2489499_2490675_+\|radical-SAM-family-heme-chaperone-HemW	unknown	unknown	gnl\|CDD\|235550
NZ_CP053808.1\|WP_000954087.1\|2507163_2507637_-\|threonine/serine-exporter-family-protein	unknown	unknown	gnl\|CDD\|182143
NZ_CP053808.1\|WP_000546924.1\|2498708_2499563_-\|co-chaperone-DjlA	unknown	unknown	gnl\|CDD\|236512
NZ_CP053808.1\|WP_001243262.1\|2504416_2505232_+\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	unknown	unknown	gnl\|CDD\|234708
NZ_CP053808.1\|WP_000005581.1\|2491738_2492458_-\|tRNA-(guanosine(46)-N7)-methyltransferase-TrmB	unknown	unknown	gnl\|CDD\|234649
NZ_CP053808.1\|WP_175242711.1\|2487510_2488068_+\|YggT-family-protein	unknown	unknown	gnl\|CDD\|223833
NZ_CP053808.1\|WP_000805058.1\|2490707_2491628_-\|glutaminase-B	unknown	unknown	gnl\|CDD\|234880
NZ_CP053808.1\|WP_069731232.1\|2488402_2488834_+\|DUF4426-domain-containing-protein	unknown	unknown	gnl\|CDD\|379616
NZ_CP053808.1\|WP_000741914.1\|2488067_2488358_+\|YggU-family-protein	unknown	unknown	gnl\|CDD\|179931

Protein	Function_ID	Function_description	E-value
NZ_CP053808.1\|WP_175242716.1\|2499721_2502073_+\|LPS-assembly-protein-LptD	gnl\|CDD\|235158	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional.	0
NZ_CP053808.1\|WP_000780521.1\|2502125_2503421_+\|peptidylprolyl-isomerase-SurA	gnl\|CDD\|236758	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional.	9.14533e-157
NZ_CP053808.1\|WP_175242715.1\|2496037_2497663_+\|cache-domain-containing-protein	gnl\|CDD\|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	5.36653e-58
NZ_CP053808.1\|WP_114808231.1\|2494146_2495274_+\|membrane-bound-lytic-murein-transglycosylase-MltC	gnl\|CDD\|183271	PRK11671, mltC, membrane-bound lytic murein transglycosylase MltC.	8.81138e-156
NZ_CP053808.1\|WP_175242712.1\|2488903_2489506_+\|XTP/dITP-diphosphatase	gnl\|CDD\|234648	PRK00120, PRK00120, dITP/XTP pyrophosphatase; Reviewed.	1.2827e-127
NZ_CP053808.1\|WP_175242717.1\|2505694_2506504_+\|symmetrical-bis(5'-nucleosyl)-tetraphosphatase	gnl\|CDD\|234673	PRK00166, apaH, symmetrical bis(5'-nucleosyl)-tetraphosphatase.	4.49032e-170
NZ_CP053808.1\|WP_000973542.1\|2506653_2507151_-\|type-3-dihydrofolate-reductase	gnl\|CDD\|365932	pfam00186, DHFR_1, Dihydrofolate reductase.	1.60035e-91
NZ_CP053808.1\|WP_000124738.1\|2493772_2494045_+\|oxidative-damage-protection-protein	gnl\|CDD\|180059	PRK05408, PRK05408, oxidative damage protection protein; Provisional.	5.47988e-59
NZ_CP053808.1\|WP_175242714.1\|2492697_2493759_+\|A/G-specific-adenine-glycosylase	gnl\|CDD\|182805	PRK10880, PRK10880, adenine DNA glycosylase.	0
NZ_CP053808.1\|WP_000383338.1\|2505303_2505684_+\|Co2+/Mg2+-efflux-protein-ApaG	gnl\|CDD\|180098	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed.	1.16069e-74
NZ_CP053808.1\|WP_044126932.1\|2503410_2504403_+\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	gnl\|CDD\|234696	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed.	0
NZ_CP053808.1\|WP_175242713.1\|2489499_2490675_+\|radical-SAM-family-heme-chaperone-HemW	gnl\|CDD\|235550	PRK05660, PRK05660, radical SAM family heme chaperone HemW.	0
NZ_CP053808.1\|WP_000954087.1\|2507163_2507637_-\|threonine/serine-exporter-family-protein	gnl\|CDD\|182143	PRK09917, PRK09917, threonine/serine exporter.	7.45224e-67
NZ_CP053808.1\|WP_000546924.1\|2498708_2499563_-\|co-chaperone-DjlA	gnl\|CDD\|236512	PRK09430, djlA, co-chaperone DjlA.	1.60415e-153
NZ_CP053808.1\|WP_001243262.1\|2504416_2505232_+\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	gnl\|CDD\|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	3.27746e-146
NZ_CP053808.1\|WP_000005581.1\|2491738_2492458_-\|tRNA-(guanosine(46)-N7)-methyltransferase-TrmB	gnl\|CDD\|234649	PRK00121, trmB, tRNA (guanine-N(7)-)-methyltransferase; Reviewed.	4.57395e-111
NZ_CP053808.1\|WP_175242711.1\|2487510_2488068_+\|YggT-family-protein	gnl\|CDD\|223833	COG0762, COG0762, Predicted integral membrane protein [Function unknown].	2.33959e-12
NZ_CP053808.1\|WP_000805058.1\|2490707_2491628_-\|glutaminase-B	gnl\|CDD\|234880	PRK00971, PRK00971, glutaminase; Provisional.	0
NZ_CP053808.1\|WP_069731232.1\|2488402_2488834_+\|DUF4426-domain-containing-protein	gnl\|CDD\|379616	pfam14467, DUF4426, Domain of unknown function (DUF4426). Members of this entry are found mostly in g-proteobacteria, especially in Vibrio. Strangely enough, there seems to be one eukaryotic homolog in Nematostella vectensis (NEMVEDRAFT_v1g226006), where the PA0388-like domain is fused with a domain homogous to the Methionine biosynthesis protein MetW (see below). In several Pseudomonas species, but also in Vibrio vulnificus and Azotobacter vinelandii PA0388 homologs are genomic neighbors of Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) and Methionine biosynthesis protein MetW. On the other hand, in most Vibrio species it appears as a part of a conserved operon involved in possible response to stress.	1.39708e-66
NZ_CP053808.1\|WP_000741914.1\|2488067_2488358_+\|YggU-family-protein	gnl\|CDD\|179931	PRK05090, PRK05090, hypothetical protein; Validated.	1.27614e-60

>NZ_CP053808.1|WP_114808231.1|2494146_2495274_+|membrane-bound-lytic-murein-transglycosylase-MltC
MRKLVLCITALLLSGCSREFIEKIYDVDYEPTNRFAKNLAELPGQFQKDTAALDALINSFSGNIEKRWGRRELKIAGKNNYVKYIDNYLSRSEVNFTEGRIIVETVSPIDPKAHLRNAIITTLLTPDDPAHVDLFSSKDIELKGQPFLYQQVLDQDGQPIQWSWRANRYADYLIANHLKVKQVDFKKAYYVEIPMVKDQIDIRGYKYASIVRKASRKYDIPEDLIYAIIKTESSFNPYAVSWANAYGLMQVVPKTAGRDVFKLVKNRSGEPSPEYLFNPENNIDTGTAYFYILKNRYLKEVRHPISLEYSMISAYNGGTGGVLSTFSSDRQRAMRDLNALQPNQVYWALTKKHPNAEARRYLEKVTKFKKEFNAG
>NZ_CP053808.1|WP_000124738.1|2493772_2494045_+|oxidative-damage-protection-protein
MARTVFCTRLQKEADGLDFQLYPGELGKRIFDNICKEAWAQWQTKQTMLINEKKLNMMDPEHRKLLEQEMVNFLFEGKEVHIEGYTPPAK
>NZ_CP053808.1|WP_175242714.1|2492697_2493759_+|A/G-specific-adenine-glycosylase
MTPFAQAILTWYDAYGRKNLPWQQNKNAYRVWLSEIMLQQTQVATVIPYFARFLERFPTVQALAAAPQDEVLHFWTGLGYYARARNLHKAAQTVVNEYGGEFPTDLEQMNALPGVGRSTAAAVLSSVYKKPHAILDGNVKRTLARCFAVEGWPGQKSVENQLWHYAEMHTPSVDVDKYNQAMMDMGAMICIRSKPKCSLCPVESFCLAKQQGNPQEYPGKKPKTDKPVKATWFVMLYHDNAVWLEQRPQSGIWGGLYCFPQSEIANIQTTIDQRAIGDSTITSQKTLIAFRHTFSHYHLDITPILLQLSRKPDIVMEGSKGLWYNLSQPDEIGLAAPVKQLLHSLPFDIDSHI
>NZ_CP053808.1|WP_000005581.1|2491738_2492458_-|tRNA-(guanosine(46)-N7)-methyltransferase-TrmB
MSEVITQEYTEDGKVLRRIRSFVRREGRLTKGQEAAMKECWPTMGIDYQPELLDWQQVFGNDNPVVLEIGFGMGASLVEMAKNAPEKNFLGIEVHSPGVGACLASAREAGVTNLRVMCHDAVEVFAHMIPDNSLHTLQLFFPDPWHKKRHHKRRIVQLEFAEMVRQKLIIGSGVFHMATDWENYAEHMIEVMNQAPGFANLATDGDYIPRPDERPLTKFEQRGHRLGHGVWDIKYQRTA
>NZ_CP053808.1|WP_000805058.1|2490707_2491628_-|glutaminase-B
MKPTAEILASIIEEVRPLTSKGIVADYIPALAKVPSEKLGIAVFTNQGEVISAGDAQEGFSIQSISKVLSLTLAMGLYQPDELWSRVGKEPSGQAFNSLIQLEMEHGIPRNPFINAGAIVVCDMLQSRLSAPRQRLLEFVRQLSGEPLIAYDKVVAASEMMHSDRNAAIAYLMRSFGNFHNEVIPVLHNYFHACALKMSCVELAKTFSYLANKGVSVVTGETVITPTQSKQTNALLATCGLYDGAGEFAYRVGMPGKSGVGGGIIAVVPGEMTIAVWSPALDQSGNSLAGTRALELLAQRIGRSIF
>NZ_CP053808.1|WP_175242713.1|2489499_2490675_+|radical-SAM-family-heme-chaperone-HemW
MLTPPPLSLYIHIPWCVQKCPYCDFNSHAQKGEIPEQEYLDALLEDLDRDIERYQLKGEPRLLHSIFIGGGTPSLISAEGIARLLQGVAERIAFKPEIEITMEANPGTIEAQRFAGYRTAGVTRISIGVQSFEPEKLARLGRIHGQQEAVRAAQLAHKIGLNSFNLDLMHGLPDQTPEQALADLDQAIALNPPHLSWYQLTIEPNTLFYSKPPKLPDEDALWDIFELGHQKLSDAGYVQYEISGYSKPSYQCQHNLNYWRFGDYLGIGCGAHGKLSFADGRIVRTTKTKHPRGYLAALNNLAKAYLDSELLVADQDKPFEFFMNRFRLIEPCPKADFTATTGLTIDVIRPTLDWAISEGYLSEDDQHWQITEKGKLFLNDLLEAFMADEEE
>NZ_CP053808.1|WP_175242712.1|2488903_2489506_+|XTP/dITP-diphosphatase
MKKIVLATGNQGKVREMADLLSDFGFDVVAQSEFNVPEVAETGTTFIENAIIKARHAAQITGLPAIADDSGLEVDYLNGAPGIYSARYAGEHASDGDNLNKLLAAMQDVPDEQRSARFHCVLVLMRHADDPTPIVCHGKWEGKILSSPHGSNGFGYDPIFWVPEENCASAELEPVRKKQLSHRGKALQKLFKAIEEQRTC
>NZ_CP053808.1|WP_069731232.1|2488402_2488834_+|DUF4426-domain-containing-protein
MRKWIMSLLLTLLALPASAEQQKTIKDIEVHYSAFNSTFLTPKVASSYQLTRNGYTAILNISVLDRASLGKPATEAKLTGHAKNLIGNLRELSFKQVKEGNAIYYLAEVPISNEEMLTFDIDVDAGLKGAGKLTFSQKFYTEQ
>NZ_CP053808.1|WP_000741914.1|2488067_2488358_+|YggU-family-protein
MAAVWREGDDLLLRLYIQPKASRDSIVGLHGEELKVAITAPPIDGKANAHLSKYLAKLCKVAKGSVVIEKGELGRHKQVRILQPSQIPAEIAALIE
>NZ_CP053808.1|WP_175242711.1|2487510_2488068_+|YggT-family-protein
MNSLSFLINTLFDLYIMVVILRIWLQAARADFYNPFSQFIVKATQPVVGPLRRVIPSIGSIDLATIVFAYVLCVLKFMALVLIASNGSVSFSADFLFFGLLSLIKAAGGLLFWVLLIRAILSWVSQGRSPIEYVFHQLTEPMLAPIRRIIPVMGGFDLSILVLFIVLQFANFLMGDVIGPIWYQL
>NZ_CP053808.1|WP_175242715.1|2496037_2497663_+|cache-domain-containing-protein
MKLKTQAYLLSAIILAALLALTATGLWTLRVASNLDNKARVTELFNSAYSILTEVEKLAQEGKMSEPEAKALATRLMRNNLYKDNEYVYVADENMTFVATPLDPQLHDTSFHDFKDGKGNSIGRLIQDVLRHQSGKLVEYTWTQKQADGSIEEKLSIARKTPHWGWVVGTGIGFNEVNARFWSTAQWQLSLCVVIAFAILSLLLVAIRKILLIIGGEPNEVRSAVQAVAQGRIRREFAIQAPKESIYGAVQQMSSSLADLVAKLEQSMVALRSELAGAGARAKSIAELTDNQQQSTAMIATAMTEMASSANQVADSARDTAFNTDQADQQSQHTQKLIHNTVSNIQGLATQLQTASTAVADLDLDVKNIAKVLDVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAGRTQTSTKEIQQMIHNLQEGSRNAIQTIQICGQTSQSSVQESENAASALALIVSALESVSSMSHQIATAAAEQTQVSDDIARRINMIEESGSKLSRVVMESHNSTQTLTKLARELEQWAAHFEVTR
>NZ_CP053808.1|WP_000546924.1|2498708_2499563_-|co-chaperone-DjlA
MHIFGKILGAFFGFLFGGPFGAIFGIFLGHQFDKARRLNQAGFQSGTFGAGPSQAERQEEFFKSAFSVMGHVAKAKGQVTKEEIQLATIMMDRMNLTLEQKRAAQDAFRDGKESDFPLEQVLERVKIATGGRFDLLQFFLELQVSSAFADGDVHPSERQVLHRIARGLGFSSEQLERRLRMQEAAFRFQQGGGFGGSQQQSHSGQQWQQPSSRHQLADAYEVLGVSESASAQEVKRAYRKLMNEHHPDKLMAKGLPPEMMNVAKEKSQQIQHAYELIRKEKGIK
>NZ_CP053808.1|WP_175242716.1|2499721_2502073_+|LPS-assembly-protein-LptD
MSCFSRTFLAASISAALFAPQIQAEASVDDNRAQLPNGEQCLVNQPEPTNPGQQPINVEADKLEAINGQKATYSGNVVVVQGKKRIAADNVTLHQQENVVVAEGNVQFSDGEIKTHSTKATNHLNTDEMTLENTRYQFLCEPGRGEAVYVSKTGKAVYEIEDGSITSCPDGDNAWRMRASSIDVDQNEEIATFYNPRLEVQNVPVFYLPYLTVPIGDTRKTGFLYPTASYGSRNGYSFEVPIYWNLAPQYDLETTFNYMQKRGTQLNSVFRYLTDFGAGQVKSEYLADDQLHTELGDRWAFQYEHNGIFQQAWKFEIDYSKVSDINYFSDLDSGVGNREDGQLIQEGRATYRSDNWDSALLVRDFQLLTKDTTSTNLPYRLMPQLSYNYYAPETMKYLDLDLVSHVSRFETDARGKPSATRVHIEPGLKIPFSNTWGNWTTEARVLGTYYQQDLDKTTDAKLEESVTRVIPEIRSVAGIVLERDTVLLDDYTQTLEPKIQYLYVPEKYQDNIGLYDSTLLQTDYYGLFRSRKYSGVDRIESANQVSYGASTRFFDSNYKERLNIAFGQIFYLDSKLNPSNKNPDSTSDKTSYSAWAVEMDFNFADYLFYHGGIQYDIDSQAVQLGNSTLEYRVASGYIQANYRYVAKDYIRNTVGDSITNIDDITRDGISQAGILAGYQLSRKWSASGQYYYDLTTDEALEWLANLTYTSDCWYVGFTYSNQLKSWNGNFVTDPYATPIYENNFSFNIGIIGFGTSIGAGSSMTGVDSAGNSLGYGRPFFLNN
>NZ_CP053808.1|WP_000780521.1|2502125_2503421_+|peptidylprolyl-isomerase-SurA
MKLWKPTLISVLSALTLFNAHAEPKQLDSVAVIVNSGVILQSDVDSALKTIKANAKQNKQPLPQETVLREQVLEKLIIDTLQQQEADRIGVKIDDNRLNEAIKEIAKNNQQTQEQLIASVAQEGLTYPEFREQVRKEMAASDARNALVRRRINILPAEVDTLAELLAQETDATVQYKISHIQLRVDDGQDKSAAETLANKLVNDLKNGADFAQMAYAYSKGPKALQGGDWGWMRKEEMPTIFADQIKMQNKGSIIGPFRSGVGFHILKIDDVKGLETVAVTEVNARHILIKPTIILSDEGAQKQLNEFVQRIKNGEVTFAELAQQYSQDPGSAAQKGELGYQTPDLYVPEFKHQIETLPVGQISEPFKTVHGWHIVEVLDRREVDRTDSALKNKAYRILFNRKFNEEASAWLQELRASAFVEVLKDEKDEQ
>NZ_CP053808.1|WP_044126932.1|2503410_2504403_+|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA
MSSKRIIVTAGEPAGIGPDLVLALSAQDWPHQLVVCADKALLTQRATQLGIQVKLLDYQRDNPVQAQQAGTLLVEHISLAEPVVAGQLNPANGHYVLKTLERAAKGCMNGEFDAIVTGPVHKGVINRAGVAFSGHTEFFAEQSKTPLVVMMLATEGLRTALVTTHLPLAEVPQAITCERLEQIVHILHKDLVEKFAIAEPKIYVCGLNPHAGEDGVLGMEEIETITPTLQRLREQYGMQLVGPLPADTIFSEKYLQQADAVLGMYHDQVLPVLKYKGFGRSVNITLGLPFIRTSVDHGTALDLAGTGQADAGSFWTALAYAIELVDKKAQ
>NZ_CP053808.1|WP_001243262.1|2504416_2505232_+|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA
MRNDVHLGHKARKRFGQNFLNDPYIIDGIVSAINPKPGQNLVEIGPGLGAITEPVGREVDKFTVIELDRDLAERLRNHPELASKLTIHEGDAMRFDFKQLVKPNNKLRVFGNLPYNISTPLMFHLFEFHRDIQDMHFMLQKEVVNRLAAGPGTKAYGRLTVMAQYYCKVVPVLEVPPSAFVPPPKVDSAVVRLVPYEDLPHPATSLEWLDRVVREGFNQRRKTVRNCYKGLAEPETLETLGINPGMRPENLTLAQFVALANWLDATHKTHA
>NZ_CP053808.1|WP_000383338.1|2505303_2505684_+|Co2+/Mg2+-efflux-protein-ApaG
MDVSLPCIKIQVQTRYIEEQSNPEYQRFVFAYLITIKNLSSQTVQLMSRRWLITDADGKQTVVEGDGVVGEQPRIKANDEYTYSSGTALDTPVGVMQGQYLMIDEQGESFTVEIEPFRLAVPHVLN
>NZ_CP053808.1|WP_175242717.1|2505694_2506504_+|symmetrical-bis(5'-nucleosyl)-tetraphosphatase
MANYIVGDIQGCFDELQQLLKQAEFNSQLDTLWFAGDLVARGPKSLETLRFAYQLGDAARVVLGNHDLHLLSVALGHHPTKRRDQTQAILDAPDAAPLLDWLRQQPLLAEHQEFVMCHAGISPQWDLATARQAAQEVESVLRSPEWSTLIEQMYSDQPDAWHPTLQGIDRLRYIVNAFTRMRFCFPDGRLDMQCKLPPQEVTDGSLLPWFQLPQRIALEKTVIFGHWAALEGYVSETVIGLDTGCVWGGTLTMLRWEDKHYFSQAALPA
>NZ_CP053808.1|WP_000973542.1|2506653_2507151_-|type-3-dihydrofolate-reductase
MMISMIAAMADQRIIGKDNQMPWHLPADFAWFKRCTLGKPVVMGRKTYQSIGRPLPGRHNIVISRDASLQIEGVDVVTSIEAALVKAGEVDEVMIIGGGSLYAACLPMAHKLYITEIHAKLEGDTQFPEWGSDWLERSREHYPADEKNAYGMDFVIFERQYPLPT
>NZ_CP053808.1|WP_000954087.1|2507163_2507637_-|threonine/serine-exporter-family-protein
MLSWDLFFGLLNDMFFAAIPAVGFALVFNVPVPALKYCALGGALGHGSRYLMMHFGVPIEWASFFAATLVGMVGVYWSRRFLAHPKVFTVAALIPMVPGVFAFKAMIALVEINHVGFSPELMEALLENFLKAMFIIAGLAVGLAVPGLLFYRRKPII

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP053808_2	2.1\|2495554\|37\|NZ_CP053808\|PILER-CR	2495554-2495590	37	NC_049942	Escherichia phage JLK-2012, complete sequence	23524-23560	4	0.892
NZ_CP053808_2	2.1\|2495554\|37\|NZ_CP053808\|PILER-CR	2495554-2495590	37	NC_021742	Serratia liquefaciens ATCC 27592 plasmid unnamed, complete sequence	35428-35464	4	0.892
NZ_CP053808_1	1.3\|1882490\|31\|NZ_CP053808\|CRT	1882490-1882520	31	KY365739	Streptomyces phage BabyGotBac, complete genome	8409-8439	9	0.71
NZ_CP053808_1	1.3\|1882490\|31\|NZ_CP053808\|CRT	1882490-1882520	31	MH178382	Streptomyces phage Salete, complete genome	8409-8439	9	0.71
NZ_CP053808_1	1.3\|1882490\|31\|NZ_CP053808\|CRT	1882490-1882520	31	KU189325	Streptomyces phage Maih, complete genome	8408-8438	9	0.71
NZ_CP053808_1	1.3\|1882490\|31\|NZ_CP053808\|CRT	1882490-1882520	31	MH178381	Streptomyces phage BayC, complete genome	8409-8439	9	0.71
NZ_CP053808_1	1.3\|1882490\|31\|NZ_CP053808\|CRT	1882490-1882520	31	KP876466	Streptomyces phage TP1604, complete genome	8409-8439	9	0.71
NZ_CP053808_1	1.6\|1882490\|32\|NZ_CP053808\|CRISPRCasFinder	1882490-1882521	32	KY365739	Streptomyces phage BabyGotBac, complete genome	8408-8439	10	0.688
NZ_CP053808_1	1.6\|1882490\|32\|NZ_CP053808\|CRISPRCasFinder	1882490-1882521	32	MH178382	Streptomyces phage Salete, complete genome	8408-8439	10	0.688
NZ_CP053808_1	1.6\|1882490\|32\|NZ_CP053808\|CRISPRCasFinder	1882490-1882521	32	KU189325	Streptomyces phage Maih, complete genome	8407-8438	10	0.688
NZ_CP053808_1	1.6\|1882490\|32\|NZ_CP053808\|CRISPRCasFinder	1882490-1882521	32	MH178381	Streptomyces phage BayC, complete genome	8408-8439	10	0.688
NZ_CP053808_1	1.6\|1882490\|32\|NZ_CP053808\|CRISPRCasFinder	1882490-1882521	32	KP876466	Streptomyces phage TP1604, complete genome	8408-8439	10	0.688
NZ_CP053808_1	1.9\|1882491\|32\|NZ_CP053808\|PILER-CR	1882491-1882522	32	KY365739	Streptomyces phage BabyGotBac, complete genome	8408-8439	10	0.688
NZ_CP053808_1	1.9\|1882491\|32\|NZ_CP053808\|PILER-CR	1882491-1882522	32	MH178382	Streptomyces phage Salete, complete genome	8408-8439	10	0.688
NZ_CP053808_1	1.9\|1882491\|32\|NZ_CP053808\|PILER-CR	1882491-1882522	32	KU189325	Streptomyces phage Maih, complete genome	8407-8438	10	0.688
NZ_CP053808_1	1.9\|1882491\|32\|NZ_CP053808\|PILER-CR	1882491-1882522	32	MH178381	Streptomyces phage BayC, complete genome	8408-8439	10	0.688
NZ_CP053808_1	1.9\|1882491\|32\|NZ_CP053808\|PILER-CR	1882491-1882522	32	KP876466	Streptomyces phage TP1604, complete genome	8408-8439	10	0.688

1. spacer 2.1|2495554|37|NZ_CP053808|PILER-CR matches to NC_049942 (Escherichia phage JLK-2012, complete sequence) position: , mismatch: 4, identity: 0.892

taggtcgccagttcgattccggcagccggcaccactt	CRISPR spacer
caggtcgccagttcgattccggtagccggcaccatat	Protospacer
.*********************.***********. *

2. spacer 2.1|2495554|37|NZ_CP053808|PILER-CR matches to NC_021742 (Serratia liquefaciens ATCC 27592 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.892

taggtcgccagttcgattccggcagccggcaccactt	CRISPR spacer
taggtcaccagttcgattccggtagccggcaccaatc	Protospacer
******.***************.*********** *.

3. spacer 1.3|1882490|31|NZ_CP053808|CRT matches to KY365739 (Streptomyces phage BabyGotBac, complete genome) position: , mismatch: 9, identity: 0.71

ataaaggcaatgatgaccatccacgcgtcag	CRISPR spacer
gggtcgggaatgatgaccagccacgcgtccc	Protospacer
. .  ** *********** *********

4. spacer 1.3|1882490|31|NZ_CP053808|CRT matches to MH178382 (Streptomyces phage Salete, complete genome) position: , mismatch: 9, identity: 0.71

ataaaggcaatgatgaccatccacgcgtcag	CRISPR spacer
gggtcgggaatgatgaccagccacgcgtccc	Protospacer
. .  ** *********** *********

5. spacer 1.3|1882490|31|NZ_CP053808|CRT matches to KU189325 (Streptomyces phage Maih, complete genome) position: , mismatch: 9, identity: 0.71

ataaaggcaatgatgaccatccacgcgtcag	CRISPR spacer
gggtcgggaatgatgaccagccacgcgtccc	Protospacer
. .  ** *********** *********

6. spacer 1.3|1882490|31|NZ_CP053808|CRT matches to MH178381 (Streptomyces phage BayC, complete genome) position: , mismatch: 9, identity: 0.71

ataaaggcaatgatgaccatccacgcgtcag	CRISPR spacer
gggtcgggaatgatgaccagccacgcgtccc	Protospacer
. .  ** *********** *********

7. spacer 1.3|1882490|31|NZ_CP053808|CRT matches to KP876466 (Streptomyces phage TP1604, complete genome) position: , mismatch: 9, identity: 0.71

ataaaggcaatgatgaccatccacgcgtcag	CRISPR spacer
gggtcgggaatgatgaccagccacgcgtccc	Protospacer
. .  ** *********** *********

8. spacer 1.6|1882490|32|NZ_CP053808|CRISPRCasFinder matches to KY365739 (Streptomyces phage BabyGotBac, complete genome) position: , mismatch: 10, identity: 0.688

ataaaggcaatgatgaccatccacgcgtcagt	CRISPR spacer
gggtcgggaatgatgaccagccacgcgtcccc	Protospacer
. .  ** *********** *********  .

9. spacer 1.6|1882490|32|NZ_CP053808|CRISPRCasFinder matches to MH178382 (Streptomyces phage Salete, complete genome) position: , mismatch: 10, identity: 0.688

ataaaggcaatgatgaccatccacgcgtcagt	CRISPR spacer
gggtcgggaatgatgaccagccacgcgtcccc	Protospacer
. .  ** *********** *********  .

10. spacer 1.6|1882490|32|NZ_CP053808|CRISPRCasFinder matches to KU189325 (Streptomyces phage Maih, complete genome) position: , mismatch: 10, identity: 0.688

ataaaggcaatgatgaccatccacgcgtcagt	CRISPR spacer
gggtcgggaatgatgaccagccacgcgtcccc	Protospacer
. .  ** *********** *********  .

11. spacer 1.6|1882490|32|NZ_CP053808|CRISPRCasFinder matches to MH178381 (Streptomyces phage BayC, complete genome) position: , mismatch: 10, identity: 0.688

ataaaggcaatgatgaccatccacgcgtcagt	CRISPR spacer
gggtcgggaatgatgaccagccacgcgtcccc	Protospacer
. .  ** *********** *********  .

12. spacer 1.6|1882490|32|NZ_CP053808|CRISPRCasFinder matches to KP876466 (Streptomyces phage TP1604, complete genome) position: , mismatch: 10, identity: 0.688

ataaaggcaatgatgaccatccacgcgtcagt	CRISPR spacer
gggtcgggaatgatgaccagccacgcgtcccc	Protospacer
. .  ** *********** *********  .

13. spacer 1.9|1882491|32|NZ_CP053808|PILER-CR matches to KY365739 (Streptomyces phage BabyGotBac, complete genome) position: , mismatch: 10, identity: 0.688

ataaaggcaatgatgaccatccacgcgtcagt	CRISPR spacer
gggtcgggaatgatgaccagccacgcgtcccc	Protospacer
. .  ** *********** *********  .

14. spacer 1.9|1882491|32|NZ_CP053808|PILER-CR matches to MH178382 (Streptomyces phage Salete, complete genome) position: , mismatch: 10, identity: 0.688

ataaaggcaatgatgaccatccacgcgtcagt	CRISPR spacer
gggtcgggaatgatgaccagccacgcgtcccc	Protospacer
. .  ** *********** *********  .

15. spacer 1.9|1882491|32|NZ_CP053808|PILER-CR matches to KU189325 (Streptomyces phage Maih, complete genome) position: , mismatch: 10, identity: 0.688

ataaaggcaatgatgaccatccacgcgtcagt	CRISPR spacer
gggtcgggaatgatgaccagccacgcgtcccc	Protospacer
. .  ** *********** *********  .

16. spacer 1.9|1882491|32|NZ_CP053808|PILER-CR matches to MH178381 (Streptomyces phage BayC, complete genome) position: , mismatch: 10, identity: 0.688

ataaaggcaatgatgaccatccacgcgtcagt	CRISPR spacer
gggtcgggaatgatgaccagccacgcgtcccc	Protospacer
. .  ** *********** *********  .

17. spacer 1.9|1882491|32|NZ_CP053808|PILER-CR matches to KP876466 (Streptomyces phage TP1604, complete genome) position: , mismatch: 10, identity: 0.688

ataaaggcaatgatgaccatccacgcgtcagt	CRISPR spacer
gggtcgggaatgatgaccagccacgcgtcccc	Protospacer
. .  ** *********** *********  .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

651477 : 658095

Staphylococcus_phage(66.67%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000210573.1\|651477_652611_+	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	1.4e-64	40.4
WP_033932838.1\|652622_653873_+	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	1.7e-100	49.7
WP_000543544.1\|653973_654423_+	transcriptional regulator NrdR	NA	NA	NA	NA
WP_114716729.1\|654448_655552_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	5.9e-44	32.9
WP_000493874.1\|655556_656210_+	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	1.2e-31	38.2
WP_114711115.1\|656250_657360_+	3,4-dihydroxy-2-butanone-4-phosphate synthase	A0A2H4PQS2	Staphylococcus_phage	6.7e-64	39.8
WP_000864130.1\|657624_658095_+	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	6.8e-34	48.7

DBSCAN-SWA_2

1442087 : 1466722

Vibrio_phage(76.92%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000948761.1\|1442087_1442399_+	hypothetical protein	E3U9J1	Vibrio_phage	6.6e-09	100.0
WP_095477405.1\|1442529_1442886_+	phage protein	G8IRV3	Vibrio_phage	1.4e-60	93.2
WP_175242594.1\|1442923_1443787_-	hypothetical protein	NA	NA	NA	NA
WP_044144141.1\|1444618_1444804_-	hypothetical protein	G8IRV2	Vibrio_phage	1.3e-20	91.8
WP_175242595.1\|1445340_1446750_-	hypothetical protein	G8IRU9	Vibrio_phage	8.6e-141	68.2
WP_000672170.1\|1446882_1447092_-	hypothetical protein	G8IRU8	Vibrio_phage	1.1e-20	81.2
WP_001900021.1\|1447125_1447356_-	hypothetical protein	G8IRU7	Vibrio_phage	3.9e-35	94.7
WP_001284206.1\|1447365_1447704_-	DUF1293 domain-containing protein	Q858R2	Vibrio_phage	1.3e-55	96.4
WP_001112192.1\|1447708_1448812_-	replication initiation factor domain-containing protein	Q64EV8	Vibrio_phage	1.5e-220	100.0
WP_175242596.1\|1448801_1449005_-	hypothetical protein	C3W4P3	Vibrio_phage	3.8e-34	97.0
WP_001018569.1\|1449015_1449264_-	hypothetical protein	O56843	Vibrio_virus	1.8e-22	65.9
WP_071170613.1\|1449418_1449775_+	regulator	Q9MCC3	Vibrio_phage	2.8e-32	57.9
WP_175242597.1\|1450096_1463335_-	MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin RtxA	B3Y8K3	Vibrio_virus	2.4e-06	96.7
WP_001881196.1\|1463358_1463820_-	RTX toxin-activating lysine-acyltransferase RtxC	NA	NA	NA	NA
WP_001906284.1\|1463845_1464193_-	hypothetical protein	NA	NA	NA	NA
WP_154081041.1\|1464616_1466722_+	RTX toxin T1SS ABC transporter subunit RtxB	W8CYL7	Bacillus_phage	4.9e-39	27.1

DBSCAN-SWA_3

2196068 : 2203261

Anguillid_herpesvirus(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001162850.1\|2196068_2196497_-	nucleoside-diphosphate kinase	D2E8E1	Anguillid_herpesvirus	1.0e-20	38.4
WP_000107237.1\|2196700_2197990_-	aminopeptidase PepB	Q6GYZ8	Mycoplasma_phage	1.7e-34	34.3
WP_000872176.1\|2198209_2198404_-	Fe-S cluster assembly protein IscX	NA	NA	NA	NA
WP_001124187.1\|2198452_2198791_-	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA
WP_175242690.1\|2198804_2200655_-	Fe-S protein assembly chaperone HscA	A0A0N9QXN8	Chrysochromulina_ericina_virus	9.1e-106	40.9
WP_001105750.1\|2200678_2201194_-	co-chaperone HscB	NA	NA	NA	NA
WP_000301571.1\|2201242_2201566_-	iron-sulfur cluster assembly protein IscA	A0A2H4N7N5	Lake_Baikal_phage	3.0e-25	50.5
WP_000331703.1\|2201626_2202010_-	Fe-S cluster assembly scaffold IscU	A0A218MKD1	uncultured_virus	5.4e-53	78.2
WP_000775249.1\|2202046_2203261_-	IscS subfamily cysteine desulfurase	A0A0H3TPH2	Faustovirus	8.8e-33	30.8

DBSCAN-SWA_4

2434892 : 2442117

uncultured_Mediterranean_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001914090.1\|2434892_2435780_+	cysteine synthase CysM	A0A1X9I5K7	Streptococcus_phage	2.4e-56	41.1
WP_001892042.1\|2436047_2438636_+	DNA mismatch repair protein MutS	A0A1V0SC35	Catovirus	2.2e-33	23.0
WP_000116739.1\|2438729_2439737_-	RNA polymerase sigma factor RpoS	F4YCU2	Synechococcus_phage	6.0e-35	34.2
WP_000177559.1\|2439810_2440746_-	murein hydrolase activator NlpD	D7RWE0	Brochothrix_phage	7.8e-05	34.7
WP_000002982.1\|2440745_2441372_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	2.0e-36	52.1
WP_000698374.1\|2441364_2442117_-	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	1.0e-68	53.3

DBSCAN-SWA_5

2753372 : 2759906

Enterobacteria_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000895181.1\|2753372_2754551_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	5.2e-14	26.9
WP_001094693.1\|2754560_2755328_-	ABC transporter permease	NA	NA	NA	NA
WP_095462752.1\|2755327_2755876_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	2.2e-52	56.1
WP_084988555.1\|2755875_2756766_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	3.1e-35	34.2
WP_069212354.1\|2756762_2757641_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	6.4e-110	67.2
WP_057556020.1\|2757664_2758729_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	4.7e-99	51.9
WP_057558688.1\|2758967_2759906_+	ADP-glyceromanno-heptose 6-epimerase	R9S880	Prochlorococcus_phage	1.6e-34	35.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP053809

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

480977 : 515841

Staphylococcus_prophage(66.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001107099.1\|480977_481937_-\|transposase	IS30 family transposase	Q9MBM9	Staphylococcus_prophage	8.7e-44	37.8
WP_175242897.1\|482180_482651_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_019281268.1\|482799_483336_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_172462063.1\|483490_483886_+	DUF3465 domain-containing protein	NA	NA	NA	NA
WP_175242898.1\|484247_484343_+	DUF645 family protein	NA	NA	NA	NA
WP_005526589.1\|484536_485073_+	nucleotidyltransferase family protein	NA	NA	NA	NA
WP_175242899.1\|485210_485615_+	DUF1801 domain-containing protein	NA	NA	NA	NA
WP_000691786.1\|485767_486403_+	DUF2807 domain-containing protein	NA	NA	NA	NA
WP_001898256.1\|486559_486946_+	MmcQ/YjbR family DNA-binding protein	NA	NA	NA	NA
WP_001107099.1\|486968_487928_-\|transposase	IS30 family transposase	Q9MBM9	Staphylococcus_prophage	8.7e-44	37.8
WP_044128234.1\|488164_488563_+	fosfomycin resistance glutathione transferase	Q2LI91	Bacillus_phage	3.8e-09	34.7
WP_175242900.1\|488743_488980_-	RNA-binding protein	NA	NA	NA	NA
WP_000549239.1\|489766_490036_-	type II toxin-antitoxin system YafQ family toxin	NA	NA	NA	NA
WP_001258568.1\|490028_490307_-	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	NA	NA	NA
WP_175242901.1\|490985_491390_+	DUF1801 domain-containing protein	NA	NA	NA	NA
WP_114763342.1\|491540_492101_+	hypothetical protein	NA	NA	NA	NA
WP_162805884.1\|492353_492590_+	DUF645 family protein	NA	NA	NA	NA
WP_000446947.1\|492794_493646_+	hypothetical protein	NA	NA	NA	NA
WP_000084910.1\|493733_494396_+	Vat family streptogramin A O-acetyltransferase	M1HKK6	Paramecium_bursaria_Chlorella_virus	4.3e-26	46.4
WP_001907607.1\|494747_494843_+	DUF645 family protein	NA	NA	NA	NA
WP_175242902.1\|495040_495526_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_175242903.1\|495510_495633_+	DUF3265 domain-containing protein	NA	NA	NA	NA
WP_095474051.1\|496168_496804_+	hypothetical protein	NA	NA	NA	NA
WP_000802131.1\|496927_497227_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_002044787.1\|497223_497466_-	type II toxin-antitoxin system ParD family antitoxin	NA	NA	NA	NA
WP_080483479.1\|497513_497645_+	DUF3265 domain-containing protein	NA	NA	NA	NA
WP_095457894.1\|497831_498011_+	DUF645 family protein	NA	NA	NA	NA
WP_175243021.1\|498234_498975_+	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA
WP_069648819.1\|499118_499607_+	hypothetical protein	NA	NA	NA	NA
WP_001107099.1\|499629_500589_-\|transposase	IS30 family transposase	Q9MBM9	Staphylococcus_prophage	8.7e-44	37.8
WP_000529841.1\|500830_501439_+	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA
WP_080008060.1\|501446_501557_+	DUF3265 domain-containing protein	NA	NA	NA	NA
WP_000086649.1\|501647_501929_+	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA
WP_000869999.1\|501925_502213_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_046122431.1\|502316_502679_+	DUF4144 domain-containing protein	NA	NA	NA	NA
WP_076008659.1\|503701_503812_+	DUF3265 domain-containing protein	NA	NA	NA	NA
WP_001015868.1\|503850_504237_+	NUDIX hydrolase	NA	NA	NA	NA
WP_175242904.1\|504396_505842_+	caspase family protein	NA	NA	NA	NA
WP_175242905.1\|506647_506737_+	DUF645 family protein	NA	NA	NA	NA
WP_175243022.1\|506733_506787_+	DUF645 family protein	NA	NA	NA	NA
WP_001180243.1\|507023_507341_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_001961623.1\|507359_507602_-	type II toxin-antitoxin system prevent-host-death family antitoxin	NA	NA	NA	NA
WP_001107099.1\|507719_508679_-\|transposase	IS30 family transposase	Q9MBM9	Staphylococcus_prophage	8.7e-44	37.8
WP_001250180.1\|508980_509232_+	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA
WP_000221354.1\|509221_509509_+	type II toxin-antitoxin system RelE/ParE family toxin	A0A2H4JBF4	uncultured_Caudovirales_phage	7.6e-20	54.8
WP_005526589.1\|509652_510189_+	nucleotidyltransferase family protein	NA	NA	NA	NA
WP_001107099.1\|510211_511171_-\|transposase	IS30 family transposase	Q9MBM9	Staphylococcus_prophage	8.7e-44	37.8
WP_000049417.1\|511982_512396_+	VOC family protein	NA	NA	NA	NA
WP_019830329.1\|512560_512920_+	VOC family protein	NA	NA	NA	NA
WP_000123660.1\|513113_513827_+	Fic family protein	NA	NA	NA	NA
WP_046127316.1\|514502_514841_+	hypothetical protein	NA	NA	NA	NA
WP_001107099.1\|514881_515841_-\|transposase	IS30 family transposase	Q9MBM9	Staphylococcus_prophage	8.7e-44	37.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP053808

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP053809

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection