CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP053615	Proteus mirabilis strain MPE0734 chromosome, complete genome	1 crisprs	csa3,DinG,cas3,DEDDh,PD-DExK,c2c9_V-U4,RT,TnsE_C,WYL	0	0	12	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP053615_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053615_1

3646514-3646656

Orphan

Consensus_repeat	Method
CCACCTGTAAAATTGATATCACC	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP053615_1

>merge|NZ_CP053615|1|3646514-3646656|CRISPRCasFinder
CCACCAGTAAAGTTGGTATTACCATAATTAGAGTTATGTTTTATTACATTTGCTATGCCGCCACCTGTAAAATTGATATCACCTTGTGTAACATCAGATTTAATGACATTACCAGCGCCACCACCTGTGAAATTGATATCACC

>NZ_CP053615|1|1|3646514-3646656|CRISPRCasFinder
CCACCAGTAAAGTTGGTATTACC	ATAATTAGAGTTATGTTTTATTACATTTGCTATGCCG
CCACCTGTAAAATTGATATCACC	TTGTGTAACATCAGATTTAATGACATTACCAGCGCCA
CCACCTGTGAAATTGATATCACC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053615.1\|WP_004244089.1\|3621382_3622135_-\|cell-division-protein-ZapD	unknown	unknown	gnl\|CDD\|235389
NZ_CP053615.1\|WP_036971246.1\|3625427_3625871_-\|prepilin-peptidase-dependent-pilin	unknown	unknown	gnl\|CDD\|236718
NZ_CP053615.1\|WP_046334656.1\|3626081_3626624_+\|1,6-anhydro-N-acetylmuramyl-L-alanine-amidase-AmpD	unknown	unknown	gnl\|CDD\|236984
NZ_CP053615.1\|WP_004244063.1\|3653650_3654274_+\|arginine-exporter-ArgO	unknown	unknown	gnl\|CDD\|236463
NZ_CP053615.1\|WP_081042241.1\|3656038_3657013_+\|nucleotidyl-transferase-AbiEii/AbiGii-toxin-family-protein	unknown	unknown	gnl\|CDD\|378065
NZ_CP053615.1\|WP_004244087.1\|3622137_3622752_-\|dephospho-CoA-kinase	unknown	unknown	gnl\|CDD\|234620
NZ_CP053615.1\|WP_004244059.1\|3657214_3658114_-\|LysR-family-transcriptional-regulator-ArgP	unknown	unknown	gnl\|CDD\|235144
NZ_CP053615.1\|WP_104836636.1\|3623029_3624229_-\|type-II-secretion-system-F-family-protein	unknown	unknown	gnl\|CDD\|182559
NZ_CP053615.1\|WP_052715530.1\|3655322_3656042_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053615.1\|WP_046334654.1\|3648343_3648571_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053615.1\|WP_004244080.1\|3627884_3630551_+\|pyruvate-dehydrogenase-(acetyl-transferring),-homodimeric-type	unknown	unknown	gnl\|CDD\|236500
NZ_CP053615.1\|WP_020946015.1\|3624225_3625329_-\|Flp-pilus-assembly-complex-ATPase-component-TadA	unknown	unknown	gnl\|CDD\|236694
NZ_CP053615.1\|WP_175215936.1\|3652621_3653458_+\|small-conductance-mechanosensitive-channel-MscS	unknown	unknown	gnl\|CDD\|182386
NZ_CP053615.1\|WP_004244067.1\|3649390_3651988_+\|bifunctional-aconitate-hydratase-2/2-methylisocitrate-dehydratase	unknown	unknown	gnl\|CDD\|236424
NZ_CP053615.1\|WP_017827184.1\|3630563_3632435_+\|pyruvate-dehydrogenase-complex-dihydrolipoyllysine-residue-acetyltransferase	unknown	unknown	gnl\|CDD\|236999
NZ_CP053615.1\|WP_004244066.1\|3652158_3652530_+\|YacL-family-protein	unknown	unknown	gnl\|CDD\|235372
NZ_CP053615.1\|WP_004244077.1\|3632636_3634064_+\|dihydrolipoyl-dehydrogenase	unknown	unknown	gnl\|CDD\|180579
NZ_CP053615.1\|WP_162837617.1\|3648571_3648718_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053615.1\|WP_004248538.1\|3654364_3655099_+\|oxidative-stress-defense-protein	unknown	unknown	gnl\|CDD\|236840
NZ_CP053615.1\|WP_004244081.1\|3626935_3627721_+\|pyruvate-dehydrogenase-complex-transcriptional-repressor-PdhR	unknown	unknown	gnl\|CDD\|181879

Protein	Function_ID	Function_description	E-value
NZ_CP053615.1\|WP_004244089.1\|3621382_3622135_-\|cell-division-protein-ZapD	gnl\|CDD\|235389	PRK05287, PRK05287, cell division protein ZapD.	9.25043e-119
NZ_CP053615.1\|WP_036971246.1\|3625427_3625871_-\|prepilin-peptidase-dependent-pilin	gnl\|CDD\|236718	PRK10574, PRK10574, putative major pilin subunit; Provisional.	5.06138e-55
NZ_CP053615.1\|WP_004244066.1\|3652158_3652530_+\|YacL-family-protein	gnl\|CDD\|235372	PRK05248, PRK05248, hypothetical protein; Provisional.	9.00597e-61
NZ_CP053615.1\|WP_004244063.1\|3653650_3654274_+\|arginine-exporter-ArgO	gnl\|CDD\|236463	PRK09304, PRK09304, arginine exporter ArgO.	1.63858e-119
NZ_CP053615.1\|WP_081042241.1\|3656038_3657013_+\|nucleotidyl-transferase-AbiEii/AbiGii-toxin-family-protein	gnl\|CDD\|378065	pfam08843, AbiEii, Nucleotidyl transferase AbiEii toxin, Type IV TA system. This family was recently identified as belonging to the nucleotidyltransferase superfamily. AbiEii is the cognate toxin of the type IV toxin-antitoxin 'innate immunity' bacterial abortive infection (Abi) system that protects bacteria from the spread of a phage infection. The Abi system is activated upon infection with phage to abort the cell thus preventing the spread of phage through viral replication. There are some 20 or more Abis, and they are predominantly plasmid-encoded lactococcal systems. TA, toxin-antitoxin, systems on plasmids function by killing cells that lose the plasmid upon division. AbiE phage resistance systems function as novel Type IV TAs and are widespread in bacteria and archaea. The cognate antitoxin is pfam13338.	5.6329e-25
NZ_CP053615.1\|WP_004244087.1\|3622137_3622752_-\|dephospho-CoA-kinase	gnl\|CDD\|234620	PRK00081, coaE, dephospho-CoA kinase; Reviewed.	7.55125e-90
NZ_CP053615.1\|WP_104836636.1\|3623029_3624229_-\|type-II-secretion-system-F-family-protein	gnl\|CDD\|182559	PRK10573, PRK10573, protein transport protein HofC.	1.04938e-108
NZ_CP053615.1\|WP_046334656.1\|3626081_3626624_+\|1,6-anhydro-N-acetylmuramyl-L-alanine-amidase-AmpD	gnl\|CDD\|236984	PRK11789, PRK11789, 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD.	4.66599e-131
NZ_CP053615.1\|WP_004244080.1\|3627884_3630551_+\|pyruvate-dehydrogenase-(acetyl-transferring),-homodimeric-type	gnl\|CDD\|236500	PRK09405, aceE, pyruvate dehydrogenase subunit E1; Reviewed.	0
NZ_CP053615.1\|WP_020946015.1\|3624225_3625329_-\|Flp-pilus-assembly-complex-ATPase-component-TadA	gnl\|CDD\|236694	PRK10436, PRK10436, hypothetical protein; Provisional.	1.37631e-179
NZ_CP053615.1\|WP_175215936.1\|3652621_3653458_+\|small-conductance-mechanosensitive-channel-MscS	gnl\|CDD\|182386	PRK10334, PRK10334, small-conductance mechanosensitive channel MscS.	1.15714e-119
NZ_CP053615.1\|WP_004244067.1\|3649390_3651988_+\|bifunctional-aconitate-hydratase-2/2-methylisocitrate-dehydratase	gnl\|CDD\|236424	PRK09238, PRK09238, bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Validated.	0
NZ_CP053615.1\|WP_017827184.1\|3630563_3632435_+\|pyruvate-dehydrogenase-complex-dihydrolipoyllysine-residue-acetyltransferase	gnl\|CDD\|236999	PRK11854, aceF, pyruvate dehydrogenase dihydrolipoyltransacetylase; Validated.	0
NZ_CP053615.1\|WP_004244059.1\|3657214_3658114_-\|LysR-family-transcriptional-regulator-ArgP	gnl\|CDD\|235144	PRK03635, PRK03635, ArgP/LysG family DNA-binding transcriptional regulator.	1.29397e-161
NZ_CP053615.1\|WP_004244077.1\|3632636_3634064_+\|dihydrolipoyl-dehydrogenase	gnl\|CDD\|180579	PRK06467, PRK06467, dihydrolipoamide dehydrogenase; Reviewed.	0
NZ_CP053615.1\|WP_004248538.1\|3654364_3655099_+\|oxidative-stress-defense-protein	gnl\|CDD\|236840	PRK11087, PRK11087, oxidative stress defense protein; Provisional.	6.92322e-114
NZ_CP053615.1\|WP_004244081.1\|3626935_3627721_+\|pyruvate-dehydrogenase-complex-transcriptional-repressor-PdhR	gnl\|CDD\|181879	PRK09464, pdhR, pyruvate dehydrogenase complex transcriptional repressor PdhR.	9.32797e-169

>NZ_CP053615.1|WP_004244077.1|3632636_3634064_+|dihydrolipoyl-dehydrogenase
MSTEIKAQVVVLGAGPAGYSAAFRCADLGLDTVLVERHSTLGGVCLNVGCIPSKALLHVAKVIEEAKALSEHGVVFDAPKTDIDKIRIWKDKVISQLTGGLAGMAKGRKVNVVNGEARFTGSHTLSVEGSEGTTTITFENAIVAAGSRPIELPFIPHEDPRVWDSTDALQLKTVPERLLVMGGGIIGLEMGTVYHALGSQIDVVEMFDQVIPAADKDVVKVFTKRISKKFNLMLETKVTAVEAKEDGIYVTMEGKKAPAEPQRYDAVLVAIGRVPNGKLLDAGKAGIEVDDRGFIHVDKQMRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEVISGKKHYFDPKVIPSIAYTEPEVAWVGMTEKEAKEKGVSYEVATFPWAASGRAIASDCADGMTKLIFDKETNRVIGGAIVGSNGGELLGEIGLAIEMGCDAEDIALTIHAHPTLYESIGMAAEVFEGSITDLPNPKAKKKK
>NZ_CP053615.1|WP_017827184.1|3630563_3632435_+|pyruvate-dehydrogenase-complex-dihydrolipoyllysine-residue-acetyltransferase
MSIEIKVPDIGADEVEVTEVMVKVGDRIEEEQSLITVEGDKASMEVPSPQAGIVKEIKIAVGDKVETGSLIMIFDTEEGAQAPAQEAAPAPSAAAPAASELKEVHVPDIGGDEVEVTEVMVNVGDTISEEQSLITVEGDKASMEVPAPFAGVVKEIKIAVGDKVSTGSLIMVFEVAGSAPAPSASAPAPAASAPAASAIKDVNVPDIGGDEVEVTEVMVKVGDTIAEEQSLITVEGDKASMEVPAPFAGVVKEIKIAVGDKVKTGSLIMTFEVAGAAPAAQAPAAPAASTSAAPAPSAPAKAPASAPAAKEEFVENEAYVHATPVIRRLAREFGVNLAKVKGTGRKGRILREDVQSYVKELIKRAESAPANAGGGLPGMLPWPKVDFSKFGEIEEVELSRIQKISGANLSRNWVMIPHVNLFDEADITEVEEFRKQQNKEAEKKKLDVKITPLVFVMKAAAKALADMPRFNSSISEDGQKLILKKYINIGIAVDTPNGLVVPVFKDVNKKGILELSYELAEVSKKARAGKLTASDMQGGCFTISSLGGIGTTGFAPIVNAPEVAIMGLSRSSMKPVWNGKEFVPRLMLPMSLSFDHRVIDGADGARFITLINQYMSDLRRLVM
>NZ_CP053615.1|WP_004244080.1|3627884_3630551_+|pyruvate-dehydrogenase-(acetyl-transferring),-homodimeric-type
MSDMLKNDVDPIETRDWLQAIDSVIREEGVERAQFLIDQVLKQARNGGLDIALGGSVHSDYINTIPVEDEPAYPGNLELERRIRSAIRWNAVMMVLRASKKDLELGGHMASYQSSATLYEVCFNHFFRAHNDNDGGDLVYFQGHISPGIYARAFLEGRLTEEQLNNFRQEIGGKGLSSYPHPKLMPEFWQFPTVSMGLGPLSAIYQAKFLKYLDHRGLKDTTKQRVYAFLGDGEMDEPESKGAITIAVREKLDNLCFVVNCNLQRLDGPVTGNGKIVNELEGIFAGAGWNVIKVMWGDRWDALLRKDTSGKLIQLMNETLDGDYQTFKSRDGAYVREHFFNRYPETAALVKDMTDDEIWALNRGGHDPKKVFAAFQKAKETKDKPTVILAQTIKGYGMGETAEGKNIAHQVKKMNMDGVKHFRDRFNIPVSDEKVAELPYITFDKDSEEYKYLHARRQELEGYLPARRTRFDEKLEIPTLEDFSQLLEEQSKEISTTIAFVRALNVMLKNKSIKDRLVPIIADEARTFGMEGLFRQIGIYSPNGQQYTPQDREQVAYYKEDVKGQILQEGINELGAGASWLAAATSYSTNNLPMIPFYIYYSMFGFQRIGDLCWAAGDQQARGFLIGGTSGRTTLNGEGLQHEDGHSHIQSLTIPNCISYDPAFAYEVAVIMQDGLERMYGDKQENVYYYITTLNENYHMPAMPAGAEEGIRKGIYKLESLEGAKGKVQLLGSGSILRHVREAAQILSTEYGIGSDVYSVTSFTELARDGQDCERWNMLHPSEEPRVPYIAQIMNDAPAVASTDYMKLFAEQVRTYVPADDYRVLGTDGFGRSDSRENLRHHFEVDTSYVIVAALGELAKRGEIDVKVVEEAIKKYNINPEKVNPRLA
>NZ_CP053615.1|WP_004244081.1|3626935_3627721_+|pyruvate-dehydrogenase-complex-transcriptional-repressor-PdhR
MASSNMAYTKIRQPKLSDVIEQQLEHLILEGTLRPGEKLLPERELAKQFDVSRPSLREAIQKLEAKGFLLRRQGGGTFVQDNLWQSFSDPLAQLLSGHPESQFDLLETRHALEGIAAYYAALRGTDDDLERIKASHARIIDAHDKGDIAAESDAVLQYQLIVTEAAHNVVLLHLLRCMVPMLEQNIRQNFEFLYTRKEMLTAVSEHRTQIYQAIINREPEAAREASHRHLAFIEDVLLDMSREHTRRERSLRRLQQHPDLF
>NZ_CP053615.1|WP_046334656.1|3626081_3626624_+|1,6-anhydro-N-acetylmuramyl-L-alanine-amidase-AmpD
MEIKQGWLTGVKHVPSPNYDNRPEGEIPSLLIIHNISLPPGQFGGPYIDQLFTNTLVVDDHPFFNEIAHLRVSAHCLIRRDGEIVQYVPFTARAWHAGVSFYKGREKCNDFSIGIELEGTDECDFTSQQYQQLSTLTQQLIEHYPGIKENITGHSDVAPGRKTDPGPHFNWSYYRALLAK
>NZ_CP053615.1|WP_036971246.1|3625427_3625871_-|prepilin-peptidase-dependent-pilin
MNTLNYHSTENGFTLMELMIVIAIISILSSVAIPAYHGYIQKAALTDVLQTLSPYRSAVELCHYEHQYNQCHADASFMPQQFRSRYLTDIHVANGVISAKGKAQLEGLTIVMTPATNSKETLPQWQINCTSTNTALQTLCHKVFKSH
>NZ_CP053615.1|WP_020946015.1|3624225_3625329_-|Flp-pilus-assembly-complex-ATPase-component-TadA
MNNTIHTATEFIEQLLRHSLAQRVSDLHLEPQQNSLRIRARIDNHLVLFSPPDNQLADEILTRLKILANINIAEKRLPQDGQFNWSYQKNNYSIRVATLPTLYGEKIVLRLMNNLQQPQLAQLGFQTIHLTLLKKYLTQPQGMILVTGPTGSGKTLTLYSCLQYLNKDNRNINSIEDPIELPLQGINQTQITEKAGITFATILRALLRQDPDVIMIGEIRDQQTAEIAIKAAQTGHLVLSTLHTNSTQATLARLANLGIAKDLIDSCVKLIISQRLVRCLCSNCKYPSPEQRNFIINNQQIILPNWQATGCQFCYSGYKGRTAIYDCFELAKQSLPSPYALFNSGIELIKKGITSLDEVYQVVGDIE
>NZ_CP053615.1|WP_104836636.1|3623029_3624229_-|type-II-secretion-system-F-family-protein
MKLHFIYRYNALTYQGKWLSGNVVAQSKHEVIDQLIQQQKLPVKIRLYRVIIFQNSDKQYRIQLLEQLALLLHSGLALLPALTLLKEECRYLHWQCVLNDIIFHLNQGGALSKQLSRYPLYFPANLTHFIYIGEESGKLDEVLLLQTTQLKNQRDLIKKIIKAFQYPLFLLLTLIVITISMLIYVLPEYQSLYSAFNTELPMLTLTLIRCSQWFSQYSLIILLFILIISYSYYTIKHHSAKFRDIEQRCWLNLPYLGILLRYHQLHIIFQIMTITQQAGLPLLQGLKIITEQLTHSLYQRALTDMIAHITQGKSLSSFMRHNPLFPPICYQFISSAENSGQLQFFCQQLTHWFYHQLEERLDSVKTWLEPILMTLIALITGTLIIAMYLPVLQLGDTIH
>NZ_CP053615.1|WP_004244087.1|3622137_3622752_-|dephospho-CoA-kinase
MTYTVALTGGIGSGKTTIANGFASLGVPLVDADVIARLVVEPDSPGLKALQQHFGDTILLPDGKLNRAQLRHIIFQNQQEKAWVNQLLHPLIQQETQKQIQQIRAPYFIWVVPLLVENKLTHLADRILVVDVTEEEQITRTMQRDGVSRDHVLKILQAQAKREQRLAVADDIIENHDNSLNQDEQIKQLHQHYLELAQKSNTGQ
>NZ_CP053615.1|WP_004244089.1|3621382_3622135_-|cell-division-protein-ZapD
MSEETSTIIFEHPLNEKMRSWLRIENSLIQLNSFQSINSLSSALSFFRAVSEFIEVLDRGEIRAELLKELEKRQKKLQQWLSFPNVDKEIVSHIINELSESACALSKAPRIGQHLKQDKIISLVKQRLSIPGGCCSFDVPTLHLWLNLPQTVRTEKLTCWQEGLYPLQNALNALLTLIRQSDTFKPVLSHNGFYQDSTEEGELLRIKLLASQQIYPQVSGHKNRYAIRFLPLDSEHGTIPSELPFEISCC
>NZ_CP053615.1|WP_046334654.1|3648343_3648571_-|hypothetical-protein
MNHIPASGFIYMASIIKSMLENPCINKEFEKLIAADLLPILQNKTNMTENFTALHLIKKTSNRRIILKKNLFIIN
>NZ_CP053615.1|WP_162837617.1|3648571_3648718_-|hypothetical-protein
MAINEKFVQKTSSINYNNGIFSLYFVGQDPHKIAQGIMPEKDEELALK
>NZ_CP053615.1|WP_004244067.1|3649390_3651988_+|bifunctional-aconitate-hydratase-2/2-methylisocitrate-dehydratase
MLEEYRKHVAERAAEGVVPKPLDATQTAALVELLKSPPKGEEEFLLDLIVNRVPPGVDEAAYVKAGFLTALAKGETTSPLITPEKAVELLGTMQGGYNIHALIEALDNDKLAPIAAKALSHTLLMFDSFYDVEEKAKAGNVYAKQIMQSWADGEWFTERPELAEKITVTVFKVTGETNTDDLSPAPDAWSRPDIPLHALAMLKNAREGIEPDQPGSVGPIKQIEALNKKGFPLAYVGDVVGTGSSRKSATNSVLWFMGDDIPYVPNKRGGGVVLGGKIAPIFFNTMEDAGALPIEVDVSKLNMGDVIDIYPYKGEIRNHETNELLETFALKTEVLIDEVRAGGRIPLIIGRGLTSKARSALGLPPSTLFRHAKAVEQSDRGFSLAQKMVGRACGRDGIRPGEYCEPKMTSVGSQDTTGPMTRDELKDLACLGFSADLVMQSFCHTAAYPKPVDVTTHHTLPDFIMNRGGVSLRPGDGIIHSWLNRMLLPDTVGTGGDSHTRFPIGISFPAGSGLVAFAAATGVMPLDMPESVLVRFKGKMQPGVTLRDLVHAIPLYAIKEGLLTVEKKGKKNIFSGRILEIEGLPELKVEQAFELADASAERSAAGCTIKLDKAPIIEYLQSNIVLLKWMIAEGYGDRRTLERRITAMENWLADPQLLEADADAEYAAVIEIDLNEIKEPILCAPNDPDDARLLSEVANSKIDEVFIGSCMTNIGHFRAAGKLLDQHKGQLPTRLWVAPPTKMDAAQLTEEGYYSVFGKSGARIEVPGCSLCMGNQARVADGATVVSTSTRNFPNRLGTGANVYLASAELAAVASLLGRLPEPQEYLDFINKVDETAEDTYRYLNFDQLEQYTDKATQVIFQTTV
>NZ_CP053615.1|WP_004244066.1|3652158_3652530_+|YacL-family-protein
MDYEFQRDLTGGILARFSMDHEAIGYWLNDEIQGDISLIDQILTEMDEVKGSEKQWQLIGKEYSLSIDDEEIMVRANTLHFETDDLEEGMSYYDNESIAFCGLDDFATMLQKYRLFILENRRS
>NZ_CP053615.1|WP_175215936.1|3652621_3653458_+|small-conductance-mechanosensitive-channel-MscS
MNELPASLDEATGWFVANQELFIQYAVNIVAAFLILFIGLFVAKMVSKGVARILTLRHIDATVVTFLSVLVRYTVIAFTLIAVLGRLGVQTASVIAVLGAAGLAVGLALQGSLSNFAAGVLIVIFRPIRAGEYVMIGAVEGTVRDVQIFSTTLRSADDRIIVIPNSKIISSEVINLSREPNRRTQIIVGVAYDADIDKVKKVLGDVVAQDKRIQHNQGVTIRLHEMAPSSLNFVVRVWTTNDDAWPVYWDLMENFKRALDANNIGIPFPQMDVYMHQA
>NZ_CP053615.1|WP_004244063.1|3653650_3654274_+|arginine-exporter-ArgO
MLTTFFQGFLLSAAMILPIGAQNAFVLQQGSKKQYHLMSAFLCALSDVILISGGVFGGSALLSQSEYLLLLITWGGVAFLLWYGWNAFKTAFTKEIELSQHKNQVKSRWRVIVTLVAVTWLNPHVYLDTFVVLGSIGGQLSAELRPWFTFGAVFASISWFFALSLLAAWFSPILSQVTAQRIINLFVGCVMWFIALQLAAQGWKNLF
>NZ_CP053615.1|WP_004248538.1|3654364_3655099_+|oxidative-stress-defense-protein
MKVKAMVLASMLALGAPSIALAGAVPEGPHITTSGNATIKATPDMATLNIQVSEKAKDAAQAKKQVDERVAKYFAFLKENGVTKEDIDAANIRTQPNYEYDKKAERSVINGYTATRTVDVKIKKLDQLNTLLDGALAAGLNEINNVEFGVNDPEQYKAKAREVAIKNAIQQASSVAKGFGADLGAVYSVSYRAPEATPYPIARMKMDAMALSAPSPEAVKETYQQQSIEFKDYVDVVFELKTAK
>NZ_CP053615.1|WP_052715530.1|3655322_3656042_+|hypothetical-protein
MKIKPLVEKEINRFEFGKIFTYRDLTPYLSNPETTVKAVSRLVKNGDIKRFAKGQFYRPKKGIFGEMQLSDAEKLKTFMYQNGKRKGYITGMGLYNRLGLTTQIPKTITIASDKSPQRKDFGTVEIKLVKAKVPVSESNREYLEILDVLSNIKKIPDSNPSEVMKVIAKKLKNIKKDGLYELINLASFYSPVTRALLGLLIENININLALELKKQLNPTTHYRIGLDSYWDNAEEWNIE
>NZ_CP053615.1|WP_081042241.1|3656038_3657013_+|nucleotidyl-transferase-AbiEii/AbiGii-toxin-family-protein
MNLHNNPDVFLELINRTAEYFKIPEVYVEKDYWVTHVLLQLSLSEFRNDFIFKGGTALSKVFGLIKRFSEDVDLAMFNNRGLSSNQIKKCMKAAEETIAAGLTYIQKPDESKGSQFRKVYYKFPRIVSGEFGHASDVILLETNSFTSPEPFSFMPTESLIAEFIKKAQIEGGNEIITRYGLEKFEVNVLDIKRTVAEKILGLVRASSEADPKQALADKIRHIYDLCMIKRNKHYSQFFDSDSLWKMMDIVIQADRDQFREAGQWLDQPLHKSVLFSKSSEIWENIRGIFHGEFSELVYDSDLPSDDEVFSLLSSVASLLQKWSD
>NZ_CP053615.1|WP_004244059.1|3657214_3658114_-|LysR-family-transcriptional-regulator-ArgP
MKRPDYRALQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENLFGQPLLVRTVPPQPTEQGQKLLALLHQVEMLEEQWLGDENSGSTPLLLSLAVNADSLATWLLPALHPVLTQLPIRLNIQVEDETRTQERLRRGEVVGAISIQPQALPSCLVDQLGALDYLFVASPDFAQRYFANGVTKSSLLKAPAVAFDHLDDMHQAFLQQNFGLSPGSVPCHIVNSSEAFVQLAKQGSTCCMIPHLQIADELKSGELIDLTPGLCQRRMLYWHRFAPESRTMRKVTDALLDYGRKVLKQDEE

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

501924 : 511916

Escherichia_phage(66.67%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_017628118.1\|501924_504369_+	molybdopterin-dependent oxidoreductase	A0A077SK27	Escherichia_phage	5.6e-220	50.4
WP_004242892.1\|504380_504998_+	dimethylsulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	2.2e-72	58.6
WP_004242891.1\|504999_505860_+	dimethyl sulfoxide reductase anchor subunit family protein	A0A077SK59	Escherichia_phage	3.7e-25	35.5
WP_004242890.1\|505999_506611_+	Tat proofreading chaperone DmsD	A0A077SLS7	Escherichia_phage	7.3e-28	39.1
WP_004242888.1\|506663_507125_-	nucleoside deaminase	S4VYZ2	Pandoravirus	7.0e-15	34.6
WP_004242887.1\|507124_507811_-	ankyrin repeat domain-containing protein	NA	NA	NA	NA
WP_175216050.1\|508146_509847_+	potassium-transporting ATPase subunit KdpA	NA	NA	NA	NA
WP_049210313.1\|509858_511916_+	potassium-transporting ATPase subunit KdpB	E4ZFI9	Streptococcus_phage	4.8e-31	26.1

DBSCAN-SWA_2

774196 : 800919

Salmonella_phage(15.0%)

tail,transposase,terminase,capsid,head,portal,protease,lysis

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_046334262.1\|774196_774355_+\|transposase	transposase	NA	NA	NA	NA
WP_049219712.1\|774523_774724_-	hypothetical protein	Q77Z09	Phage_21	3.3e-22	92.6
WP_060555884.1\|775288_777595_+	YadA-like family protein	A0A2L1IV32	Escherichia_phage	2.2e-16	60.3
WP_049219717.1\|777648_777897_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_049219718.1\|778040_778379_+	BON domain-containing protein	NA	NA	NA	NA
WP_049219720.1\|782785_783184_-	hypothetical protein	A0A059VK01	Pseudomonas_phage	7.1e-32	46.2
WP_049219722.1\|783262_783598_-	hypothetical protein	Q775B6	Bordetella_phage	3.7e-10	35.3
WP_017628351.1\|783614_784196_-	hypothetical protein	Q7Y3Z7	Yersinia_phage	8.1e-53	50.5
WP_017628352.1\|784195_784792_-	hypothetical protein	S4TSP7	Salmonella_phage	1.6e-51	52.3
WP_175216085.1\|784792_788068_-\|tail	phage tail tape measure protein	B7SE05	Pseudomonas_virus	8.4e-54	46.4
WP_004242485.1\|788194_788386_+	YqaE/Pmp3 family membrane protein	NA	NA	NA	NA
WP_017628354.1\|788410_788689_-	DUF4035 domain-containing protein	NA	NA	NA	NA
WP_017628355.1\|788685_789102_-	hypothetical protein	NA	NA	NA	NA
WP_017628356.1\|789166_789832_-	hypothetical protein	NA	NA	NA	NA
WP_017628357.1\|789841_790183_-	DUF3168 domain-containing protein	NA	NA	NA	NA
WP_017628358.1\|790188_790662_-	HK97 gp10 family phage protein	A0A0R6PHU8	Moraxella_phage	8.2e-11	30.2
WP_017628359.1\|790651_790981_-\|head	phage head closure protein	NA	NA	NA	NA
WP_017628360.1\|790980_791280_-\|head,tail	phage head-tail connector protein	K7PKV5	Enterobacterial_phage	5.7e-34	65.3
WP_017628361.1\|791318_792485_-\|capsid	phage major capsid protein	F1C582	Cronobacter_phage	1.6e-169	79.5
WP_004242476.1\|792488_793157_-\|head,protease	HK97 family phage prohead protease	K7PM91	Enterobacterial_phage	6.6e-83	65.8
WP_017628362.1\|793174_794443_-\|portal	phage portal protein	Q77W97	Enterobacteria_phage	1.8e-201	80.4
WP_060556834.1\|794442_796176_-\|terminase	terminase large subunit	A0A0U2C138	Paracoccus_phage	9.0e-148	46.4
WP_017628364.1\|796129_796597_-\|terminase	phage terminase small subunit P27 family	Q9B019	Phage_GMSE-1	1.6e-43	59.7
WP_063691812.1\|796721_796934_-	hypothetical protein	A0A1W6JP16	Morganella_phage	1.4e-07	46.3
WP_060556836.1\|796936_797275_-	HNH endonuclease	F1C587	Cronobacter_phage	3.5e-40	67.0
WP_036976739.1\|797271_797679_-	hypothetical protein	NA	NA	NA	NA
WP_036937622.1\|797760_798273_-	KilA-N domain-containing protein	A0A1V0E5P7	Salmonella_phage	1.9e-58	65.7
WP_020946089.1\|799099_799303_+	KTSC domain-containing protein	NA	NA	NA	NA
WP_060556837.1\|799575_800037_-\|lysis	lysis protein	A0A1P8DTG0	Proteus_phage	1.5e-22	46.9
WP_175216086.1\|800039_800198_-	hypothetical protein	NA	NA	NA	NA
WP_060556838.1\|800179_800650_-	lysozyme	A0A1W6JNW4	Morganella_phage	1.0e-50	63.2
WP_020946092.1\|800649_800919_-	phage protein	A0A2H4FNF0	Salmonella_phage	1.6e-19	53.3

DBSCAN-SWA_3

807033 : 816557

Morganella_phage(50.0%)

integrase

attL 802772:802786|attR 821319:821333

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
802772:802786	attL	NA	NA	NA	NA
WP_004244726.1\|807033_807246_-	RNA chaperone/antiterminator CspA	A0A1W6JNX5	Morganella_phage	3.1e-26	81.4
WP_049219743.1\|807586_807985_-	antitermination protein	Q8W638	Enterobacteria_phage	1.6e-31	54.3
WP_060556843.1\|808012_809038_-	DUF968 domain-containing protein	A0A1W6JP62	Morganella_phage	9.2e-84	46.5
WP_063691651.1\|809034_809841_-	KilA-N domain-containing protein	A0A1W6JP13	Morganella_phage	1.0e-90	62.5
WP_060556894.1\|809862_810378_-	hypothetical protein	U5P0A0	Shigella_phage	3.5e-23	44.2
WP_017628377.1\|810935_811115_-	DUF4222 domain-containing protein	A0A1W6JP38	Morganella_phage	3.4e-10	55.2
WP_036976728.1\|811104_811314_-	hypothetical protein	NA	NA	NA	NA
WP_060556845.1\|811376_811853_-	hypothetical protein	A0A1W6JP72	Morganella_phage	3.0e-45	60.4
WP_049217157.1\|811890_812085_-	hypothetical protein	H9C161	Pectobacterium_phage	6.5e-15	61.0
WP_049217153.1\|812188_812836_+	LexA family transcriptional regulator	K7PM82	Enterobacteria_phage	2.9e-75	65.1
WP_060556846.1\|813224_813749_+	hypothetical protein	A0A1W6JP41	Morganella_phage	1.0e-54	61.6
WP_017628380.1\|813834_814086_+	excisionase	NA	NA	NA	NA
WP_060556847.1\|814060_815194_+\|integrase	phage integrase Arm DNA-binding domain-containing protein	Q77Z04	Phage_21	1.0e-155	72.8
WP_004251822.1\|815303_816557_-	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	1.8e-20	90.7
821319:821333	attR	NA	NA	NA	NA

DBSCAN-SWA_4

942902 : 1001949

uncultured_Caudovirales_phage(28.57%)

plate,integrase,transposase,tRNA,protease

attL 949575:949591|attR 992990:993006

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_175216103.1\|942902_944645_+\|protease	Lon protease family protein	NA	NA	NA	NA
WP_004244680.1\|944728_945247_+	bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase	NA	NA	NA	NA
WP_004244679.1\|945562_945733_-	ribosome modulation factor	NA	NA	NA	NA
WP_004244678.1\|946220_946625_-	ASCH domain-containing protein	NA	NA	NA	NA
WP_004244677.1\|946712_947285_-	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA
WP_004244676.1\|947284_948937_-	intermembrane transport protein PqiB	NA	NA	NA	NA
WP_046335287.1\|948929_950234_-	membrane integrity-associated transporter subunit PqiA	NA	NA	NA	NA
949575:949591	attL	NA	NA	NA	NA
WP_004244674.1\|950311_952243_-	ABC transporter ATP-binding protein	A0A2K9L3Z8	Tupanvirus	4.3e-50	28.7
WP_004247681.1\|952249_954364_-	bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL	NA	NA	NA	NA
WP_161682891.1\|954473_955616_+	MOSC N-terminal beta barrel domain-containing protein	NA	NA	NA	NA
WP_004244671.1\|955882_956434_-	cell division protein ZapC	NA	NA	NA	NA
WP_004251935.1\|956646_957657_-	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA
WP_049201627.1\|958016_959048_+	DUF1016 family protein	NA	NA	NA	NA
WP_017628415.1\|959209_961825_-	aminopeptidase N	A0A0P0IY26	Acinetobacter_phage	5.7e-21	21.6
WP_004244666.1\|962166_963381_+	nicotinate phosphoribosyltransferase	A0A2L0UZQ6	Agrobacterium_phage	1.6e-42	31.7
WP_004244665.1\|963395_963587_-	hypothetical protein	NA	NA	NA	NA
WP_004244664.1\|963660_965061_+\|tRNA	asparagine--tRNA ligase	A0A2K9V902	Bandra_megavirus	1.5e-81	37.4
WP_161682915.1\|965405_966536_+	porin	Q1MVN1	Enterobacteria_phage	3.6e-105	55.5
WP_161682889.1\|966888_968079_+	aromatic amino acid transaminase	NA	NA	NA	NA
WP_161682887.1\|968210_968366_+	DUF1778 domain-containing protein	NA	NA	NA	NA
WP_049203042.1\|968512_969475_-	hypothetical protein	NA	NA	NA	NA
WP_017628420.1\|969994_970426_-	hypothetical protein	NA	NA	NA	NA
WP_004247669.1\|971164_971641_-	hypothetical protein	NA	NA	NA	NA
WP_036894578.1\|971640_971871_-	hypothetical protein	NA	NA	NA	NA
WP_155289805.1\|972921_973071_-	hypothetical protein	NA	NA	NA	NA
WP_004247666.1\|973250_973814_-	hypothetical protein	NA	NA	NA	NA
WP_081042231.1\|974287_974857_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_049202934.1\|975060_975396_-	hypothetical protein	NA	NA	NA	NA
WP_060554594.1\|975388_975847_-	hypothetical protein	NA	NA	NA	NA
WP_004246983.1\|976797_977361_-	hypothetical protein	NA	NA	NA	NA
WP_017628426.1\|978239_978596_-	hypothetical protein	NA	NA	NA	NA
WP_175216104.1\|980295_980910_-	DUF1963 domain-containing protein	NA	NA	NA	NA
WP_175216310.1\|980921_981479_-	RHS repeat-associated core domain-containing protein	A0A2H4JHK7	uncultured_Caudovirales_phage	6.0e-13	62.5
WP_175216105.1\|981682_982087_-	hypothetical protein	NA	NA	NA	NA
WP_175216106.1\|982318_982810_-	hypothetical protein	NA	NA	NA	NA
WP_064506211.1\|983154_983604_-	SMI1/KNR4 family protein	NA	NA	NA	NA
WP_175216107.1\|983613_988356_-	RHS domain-containing protein	A0A2H4JFP5	uncultured_Caudovirales_phage	2.2e-26	46.8
WP_004251951.1\|988420_988840_-	DcrB-related protein	NA	NA	NA	NA
WP_175216108.1\|988851_991044_-	type VI secretion system tip protein VgrG	NA	NA	NA	NA
WP_004246976.1\|991127_991646_-	Hcp family type VI secretion system effector	NA	NA	NA	NA
WP_004247653.1\|993542_994043_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
992990:993006	attR	NA	NA	NA	NA
WP_175216109.1\|994063_995542_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_004244624.1\|995547_995979_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_046334530.1\|995986_997762_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_004244621.1\|997725_998763_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_175216311.1\|998767_1000036_+	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA
WP_004244619.1\|1000037_1000589_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_004247647.1\|1000590_1001949_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA

DBSCAN-SWA_5

1234553 : 1282733

Cronobacter_phage(18.92%)

tail,terminase,tRNA,lysis

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012367653.1\|1234553_1236221_-\|tRNA	glutamine--tRNA ligase	A0A222YZ70	Escherichia_phage	1.0e-286	85.0
WP_175216135.1\|1236465_1236606_+	DNA polymerase III subunit theta	A0A1P8DTI0	Proteus_phage	2.1e-15	91.3
WP_004247530.1\|1237107_1237653_+	uroepithelial cell adherence major pilin UcaA	NA	NA	NA	NA
WP_175216136.1\|1237717_1238443_+	fimbria/pilus periplasmic chaperone	NA	NA	NA	NA
WP_175216137.1\|1238452_1240987_+	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_004247527.1\|1240996_1242079_+	type 1 fimbrial protein	NA	NA	NA	NA
WP_012367647.1\|1242179_1242485_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_004247524.1\|1243193_1243454_-	hypothetical protein	A0A1P8DTJ0	Proteus_phage	1.9e-17	57.4
WP_004247523.1\|1243503_1244118_-	hypothetical protein	NA	NA	NA	NA
WP_004245936.1\|1244119_1244488_-	hypothetical protein	NA	NA	NA	NA
WP_004247520.1\|1244481_1248675_-	DUF1983 domain-containing protein	F1C571	Cronobacter_phage	1.7e-301	54.5
WP_046334564.1\|1248726_1249314_-\|tail	tail assembly protein	F1C572	Cronobacter_phage	2.9e-58	60.4
WP_046334563.1\|1249310_1250021_-	C40 family peptidase	F1C573	Cronobacter_phage	1.8e-86	66.4
WP_004245940.1\|1250017_1250761_-\|tail	phage minor tail protein L	K7PJS0	Enterobacterial_phage	1.4e-86	59.0
WP_004247516.1\|1250757_1251099_-\|tail	phage tail protein	I6PBN7	Cronobacter_phage	9.0e-28	50.0
WP_046334562.1\|1251242_1251443_+	hypothetical protein	NA	NA	NA	NA
WP_004247513.1\|1251462_1251753_-	hypothetical protein	NA	NA	NA	NA
WP_004247512.1\|1251792_1252005_-	hypothetical protein	NA	NA	NA	NA
WP_046334561.1\|1255026_1255896_-	hypothetical protein	NA	NA	NA	NA
WP_049257266.1\|1255933_1256827_-	hypothetical protein	NA	NA	NA	NA
WP_046334560.1\|1256823_1257081_-	Arc family DNA-binding protein	NA	NA	NA	NA
WP_004245955.1\|1257194_1257356_+	toxin-antitoxin system HicB family antitoxin	NA	NA	NA	NA
WP_046334559.1\|1257425_1258259_+	phage antirepressor N-terminal domain-containing protein	I6S627	Salmonella_phage	3.7e-67	55.6
WP_060961180.1\|1258531_1259494_-	hypothetical protein	A9YX09	Burkholderia_phage	2.2e-71	46.7
WP_060961179.1\|1259707_1259995_-	DUF1799 domain-containing protein	A0A2H4J4F7	uncultured_Caudovirales_phage	5.3e-13	50.7
WP_175216138.1\|1260009_1260315_-	hypothetical protein	I6PDG2	Cronobacter_phage	1.5e-21	54.5
WP_049201298.1\|1260366_1261023_-\|tail	major tail protein	G8C7Q3	Escherichia_phage	5.6e-58	56.7
WP_049195195.1\|1261067_1261469_-	DUF4128 domain-containing protein	NA	NA	NA	NA
WP_175216139.1\|1261465_1262047_-	hypothetical protein	G8C7Q1	Escherichia_phage	5.1e-47	51.6
WP_062814387.1\|1262048_1262399_-	hypothetical protein	I6PD77	Cronobacter_phage	6.4e-21	44.2
WP_004245968.1\|1262401_1262881_-	hypothetical protein	G8C7P9	Escherichia_phage	2.9e-32	47.7
WP_107033975.1\|1262920_1263205_-	Ig-like domain-containing protein	NA	NA	NA	NA
WP_175216140.1\|1263207_1264161_-	Ig domain-containing protein	A0A1B0VMF8	Pseudomonas_phage	3.1e-126	71.2
WP_175216141.1\|1264174_1264936_-	hypothetical protein	A0A1B0VMG1	Pseudomonas_phage	2.6e-67	58.9
WP_124724816.1\|1266170_1267541_-	DUF4055 domain-containing protein	A0A1B0VMH0	Pseudomonas_phage	9.0e-119	48.8
WP_175216142.1\|1267540_1269028_-\|terminase	terminase	A0A1W6JNY3	Morganella_phage	7.7e-265	88.8
WP_017628804.1\|1269030_1269633_-	hypothetical protein	A0A077KBY7	Edwardsiella_phage	2.1e-64	68.5
WP_004245978.1\|1269666_1269825_-	hypothetical protein	NA	NA	NA	NA
WP_004245979.1\|1269821_1270028_-	hypothetical protein	NA	NA	NA	NA
WP_004247494.1\|1270024_1270609_-	Bro-N domain-containing protein	Q3LZN7	Bacteriophage	2.0e-22	48.2
WP_012367624.1\|1270956_1271418_-\|lysis	lysis protein	A0A1P8DTG0	Proteus_phage	6.3e-24	45.8
WP_012367623.1\|1271420_1271579_-	hypothetical protein	NA	NA	NA	NA
WP_017628809.1\|1271560_1272031_-	lysozyme	A0A1W6JNW4	Morganella_phage	4.4e-49	62.5
WP_004247489.1\|1272030_1272300_-	hypothetical protein	A0A2H4FNF0	Salmonella_phage	6.0e-19	53.5
WP_004247488.1\|1272353_1272776_-	hypothetical protein	NA	NA	NA	NA
WP_004247148.1\|1272934_1273456_-	DUF1440 domain-containing protein	NA	NA	NA	NA
WP_004247487.1\|1273766_1274399_-	antitermination protein	I6PDF8	Cronobacter_phage	7.3e-23	34.3
WP_004245983.1\|1274398_1274755_-	RusA family crossover junction endodeoxyribonuclease	G8C7V6	Escherichia_phage	3.2e-44	71.6
WP_004245984.1\|1274751_1275042_-	DUF1364 domain-containing protein	A0A2H4JIC4	uncultured_Caudovirales_phage	7.2e-34	68.1
WP_049195179.1\|1275120_1275570_-	hypothetical protein	A0A2H4FNF5	Salmonella_phage	2.9e-13	32.2
WP_026090523.1\|1275637_1275967_-	hypothetical protein	A0A1C9LVV9	Vibrio_phage	1.1e-22	39.0
WP_060961231.1\|1275994_1277380_-	AAA family ATPase	Q716D2	Shigella_phage	4.7e-115	47.9
WP_036895070.1\|1277379_1278147_-	helix-turn-helix domain-containing protein	A5LH71	Enterobacteria_phage	1.5e-22	51.9
WP_175216143.1\|1278143_1278317_-	hypothetical protein	NA	NA	NA	NA
WP_004247478.1\|1278412_1278760_-	hypothetical protein	A0A1W6JNY4	Morganella_phage	8.3e-37	72.9
WP_004247477.1\|1278905_1279115_-	helix-turn-helix transcriptional regulator	K7PKH4	Enterobacteria_phage	1.2e-25	83.3
WP_004247476.1\|1279220_1279865_+	LexA family transcriptional regulator	A0A077KGZ5	Edwardsiella_phage	9.6e-79	64.5
WP_004245991.1\|1279873_1280215_+	DUF3024 domain-containing protein	A0A1W6JP12	Morganella_phage	2.1e-37	62.8
WP_004247475.1\|1280340_1281465_+	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA
WP_004247474.1\|1281461_1281971_+	DUF4411 family protein	NA	NA	NA	NA
WP_017827445.1\|1282415_1282733_+	hypothetical protein	A0A1W6JNZ0	Morganella_phage	9.3e-19	52.3

DBSCAN-SWA_6

1325593 : 1337559

Mycobacterium_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004246054.1\|1325593_1326805_+	D-alanyl-D-alanine carboxypeptidase DacA	B6DZZ7	Stx2-converting_phage	8.6e-105	49.1
WP_026090527.1\|1327003_1327267_+	YbeD family protein	NA	NA	NA	NA
WP_004246056.1\|1327628_1328273_+	lipoyl(octanoyl) transferase LipB	NA	NA	NA	NA
WP_004246057.1\|1328374_1329340_+	lipoyl synthase	NA	NA	NA	NA
WP_004246058.1\|1329355_1329730_+	fluoride efflux transporter CrcB	A0A2H4J148	uncultured_Caudovirales_phage	2.7e-25	52.0
WP_162492994.1\|1330473_1330614_+	hypothetical protein	NA	NA	NA	NA
WP_004246068.1\|1330798_1331008_-	transcription antiterminator/RNA stability regulator CspE	A0A1W6JNX5	Morganella_phage	5.9e-22	74.2
WP_004246069.1\|1331205_1331679_-	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	NA	NA	NA
WP_004246071.1\|1331960_1332185_+	glutaredoxin-like protein NrdH	V5UN81	Mycobacterium_phage	1.4e-13	47.9
WP_109880220.1\|1332196_1332601_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	R4JF54	Bacillus_phage	3.7e-12	37.8
WP_004252248.1\|1332629_1334756_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	V9VI16	Lactococcus_phage	1.5e-205	51.3
WP_004252250.1\|1334781_1335750_+	class 1b ribonucleoside-diphosphate reductase subunit beta	R4TBI6	Mycobacterium_phage	4.6e-133	71.0
WP_060554512.1\|1336359_1337559_+	glycine betaine/L-proline ABC transporter ATP-binding protein ProV	G3M9Y6	Bacillus_virus	3.8e-28	37.6

DBSCAN-SWA_7

2143290 : 2182251

Salmonella_phage(22.22%)

transposase,protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_175216226.1\|2143290_2144499_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A1B0VCD8	Salmonella_phage	8.1e-188	81.5
WP_012368599.1\|2144521_2144938_+\|transposase	IS200/IS605 family transposase	A0A1S5RHE3	Helicobacter_phage	1.5e-45	62.8
WP_004246276.1\|2145059_2145707_-	metal-binding protein ZinT	NA	NA	NA	NA
WP_004246277.1\|2145710_2145836_-	50S ribosomal protein L36	NA	NA	NA	NA
WP_004246279.1\|2145847_2146096_-	type B 50S ribosomal protein L31	NA	NA	NA	NA
WP_060555000.1\|2146466_2147126_+	cell envelope opacity-associated protein A	NA	NA	NA	NA
WP_004246281.1\|2147224_2147674_-	50S ribosomal protein L9	NA	NA	NA	NA
WP_000135199.1\|2147717_2147945_-	30S ribosomal protein S18	NA	NA	NA	NA
WP_004246282.1\|2147949_2148267_-	primosomal replication protein N	NA	NA	NA	NA
WP_004246283.1\|2148275_2148671_-	30S ribosomal protein S6	NA	NA	NA	NA
WP_170827695.1\|2148831_2149563_-	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA
WP_004246285.1\|2149678_2152168_-	ribonuclease R	Q0GXV6	Lactococcus_phage	1.5e-66	33.9
WP_004249627.1\|2152206_2152635_-	nitric oxide-sensing transcriptional repressor NsrR	NA	NA	NA	NA
WP_004249629.1\|2153060_2154359_-	adenylosuccinate synthase	A0A285PX35	Cedratvirus	1.4e-65	34.5
WP_004246288.1\|2154811_2155816_-\|protease	protease modulator HflC	NA	NA	NA	NA
WP_004246289.1\|2155818_2157093_-\|protease	FtsH protease activity modulator HflK	NA	NA	NA	NA
WP_060554999.1\|2157185_2158469_-	GTPase HflX	NA	NA	NA	NA
WP_004246291.1\|2158562_2158853_-	RNA chaperone Hfq	NA	NA	NA	NA
WP_004246293.1\|2158962_2159904_-\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA
WP_004249633.1\|2159872_2161882_-	DNA mismatch repair endonuclease MutL	A0A1B2LRQ5	Wolbachia_phage	3.3e-61	41.0
WP_004253037.1\|2161903_2163220_-	N-acetylmuramoyl-L-alanine amidase	A0A067ZJB6	Vibrio_phage	6.2e-16	33.3
WP_004249636.1\|2163233_2163701_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	NA	NA	NA	NA
WP_004246297.1\|2163922_2165077_+\|tRNA	tRNA epoxyqueuosine(34) reductase QueG	NA	NA	NA	NA
WP_020946610.1\|2166024_2166294_+	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA
WP_049196359.1\|2166299_2166632_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_004253041.1\|2167231_2167777_-	oligoribonuclease	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	1.3e-28	39.5
WP_004246308.1\|2167892_2168951_+	small ribosomal subunit biogenesis GTPase RsgA	NA	NA	NA	NA
WP_004246309.1\|2169039_2169951_+	phosphatidylserine decarboxylase	NA	NA	NA	NA
WP_004249643.1\|2169973_2173309_+	miniconductance mechanosensitive channel MscM	NA	NA	NA	NA
WP_063108944.1\|2174605_2175469_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004246312.1\|2175680_2176202_+	type 1 fimbrial protein	NA	NA	NA	NA
WP_004246313.1\|2176266_2176926_+	molecular chaperone	NA	NA	NA	NA
WP_049197477.1\|2176938_2179464_+	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_004249648.1\|2179473_2180493_+	fimbrial protein	NA	NA	NA	NA
WP_087726262.1\|2180603_2181020_-\|transposase	IS200/IS605 family transposase	A0A1S5RHE3	Helicobacter_phage	3.4e-45	62.0
WP_175216227.1\|2181042_2182251_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A1B0VCD8	Salmonella_phage	7.3e-189	81.3

DBSCAN-SWA_8

2434060 : 2572141

118

Salmonella_phage(21.43%)

transposase,protease,tRNA,integrase

attL 2517284:2517298|attR 2552016:2552030

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012368627.1\|2434060_2435452_+\|tRNA	L-seryl-tRNA(Sec) selenium transferase	NA	NA	NA	NA
WP_036971847.1\|2435448_2437311_+	selenocysteine-specific translation elongation factor	A0A2K9KZ60	Tupanvirus	8.2e-14	26.0
WP_012368625.1\|2437419_2439069_+	sulfatase-like hydrolase/transferase	NA	NA	NA	NA
WP_124740924.1\|2439217_2440246_-	endoglucanase	NA	NA	NA	NA
WP_004249967.1\|2440319_2441282_-	UTP--glucose-1-phosphate uridylyltransferase GalU	A0A127AW70	Bacillus_phage	1.5e-59	45.1
WP_049201511.1\|2441455_2442361_-	sensor domain-containing diguanylate cyclase	NA	NA	NA	NA
WP_004246549.1\|2442399_2442870_-	cellulose biosynthesis protein	NA	NA	NA	NA
WP_161737126.1\|2442885_2446572_-	BCSC C-terminal domain-containing protein	NA	NA	NA	NA
WP_161737127.1\|2446582_2448931_-	cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB	NA	NA	NA	NA
WP_165715203.1\|2448933_2451099_-	UDP-forming cellulose synthase catalytic subunit	NA	NA	NA	NA
WP_049203066.1\|2451195_2451591_-	hypothetical protein	NA	NA	NA	NA
WP_004246555.1\|2453034_2453946_+	N-acetylglucosamine kinase	NA	NA	NA	NA
WP_017628739.1\|2454040_2454625_+\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_141192399.1\|2454773_2455178_+	YgiW/YdeI family stress tolerance OB fold protein	A0A1I9LJU6	Stx_converting_phage	1.8e-22	42.5
WP_012368617.1\|2455474_2456140_+	DUF1120 domain-containing protein	NA	NA	NA	NA
WP_004246560.1\|2456536_2457193_+	fimbrial protein	NA	NA	NA	NA
WP_004246561.1\|2457606_2458269_+	hypothetical protein	NA	NA	NA	NA
WP_004246562.1\|2458553_2459192_+	hypothetical protein	NA	NA	NA	NA
WP_004246563.1\|2459216_2459531_+	hypothetical protein	NA	NA	NA	NA
WP_004249799.1\|2459704_2461618_+	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_141192240.1\|2461639_2462314_+	fimbria/pilus periplasmic chaperone	NA	NA	NA	NA
WP_004249975.1\|2462498_2462948_+	metal-binding protein	NA	NA	NA	NA
WP_004246567.1\|2463042_2464563_-	MFS transporter	NA	NA	NA	NA
WP_012368615.1\|2464555_2465656_-	HlyD family secretion protein	NA	NA	NA	NA
WP_004246569.1\|2465777_2466416_+	TetR/AcrR family transcriptional regulator C-terminal domain-containing protein	NA	NA	NA	NA
WP_004246570.1\|2466508_2467915_-	YfcC family protein	NA	NA	NA	NA
WP_004246571.1\|2467924_2469058_-	M20 family metallopeptidase	NA	NA	NA	NA
WP_012368613.1\|2469932_2470745_+	phosphonoacetaldehyde hydrolase	NA	NA	NA	NA
WP_165715202.1\|2470833_2471121_+	DUF2645 family protein	NA	NA	NA	NA
WP_161735058.1\|2471176_2471581_+	DUF1240 domain-containing protein	NA	NA	NA	NA
WP_004249983.1\|2471799_2472204_+	DUF1240 domain-containing protein	NA	NA	NA	NA
WP_175216254.1\|2472336_2473494_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A1B0VCD8	Salmonella_phage	3.1e-181	81.6
WP_165715200.1\|2473516_2473933_+\|transposase	IS200/IS605 family transposase	A0A1S5RHE3	Helicobacter_phage	3.8e-44	62.0
WP_017628743.1\|2474026_2475154_-	TIGR03364 family FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_026164670.1\|2475207_2476215_-	putative 2-aminoethylphosphonate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_161737202.1\|2476263_2477955_-	putative 2-aminoethylphosphonate ABC transporter permease subunit	NA	NA	NA	NA
WP_004249814.1\|2477967_2479044_-	putative 2-aminoethylphosphonate ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.1e-26	34.8
WP_001353740.1\|2479971_2480211_+	DUF1819 family protein	NA	NA	NA	NA
WP_175216255.1\|2481761_2482607_+	lincosamide nucleotidyltransferase Lnu(F)	NA	NA	NA	NA
WP_000777554.1\|2482603_2483077_+	trimethoprim-resistant dihydrofolate reductase DfrA1	A0A140HLG8	Bacillus_phage	1.6e-19	34.4
WP_001206316.1\|2483093_2483885_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1	NA	NA	NA	NA
WP_000800531.1\|2484054_2484387_+	quaternary ammonium compound efflux SMR transporter QacL	E5E3Y9	Acinetobacter_phage	2.0e-08	35.3
WP_109023896.1\|2485288_2485564_+	hypothetical protein	NA	NA	NA	NA
WP_000034420.1\|2485566_2486358_-	sulfonamide-resistant dihydropteroate synthase Sul3	NA	NA	NA	NA
WP_001354008.1\|2486826_2487072_-	GrpB family protein	NA	NA	NA	NA
WP_000612791.1\|2487109_2487973_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_001067855.1\|2488203_2488908_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000376616.1\|2489132_2489336_-	hypothetical protein	NA	NA	NA	NA
WP_000259031.1\|2489463_2490303_-	sulfonamide-resistant dihydropteroate synthase Sul1	NA	NA	NA	NA
WP_000679427.1\|2490296_2490644_-	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
WP_001749986.1\|2490866_2491319_-	NAD(+)--rifampin ADP-ribosyltransferase Arr-3	NA	NA	NA	NA
WP_000186237.1\|2491403_2492036_-	type B-3 chloramphenicol O-acetyltransferase CatB3	A0A2R8FE91	Brazilian_cedratvirus	4.1e-26	41.2
WP_001334766.1\|2492173_2493004_-	oxacillin-hydrolyzing class D beta-lactamase OXA-1	NA	NA	NA	NA
WP_063840321.1\|2493134_2493689_-	fluoroquinolone-acetylating aminoglycoside 6'-N-acetyltransferase AAC(6')-Ib-cr5	NA	NA	NA	NA
WP_001067855.1\|2493832_2494537_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_001199192.1\|2494650_2495427_+	aminoglycoside N-acetyltransferase AAC(3)-IVa	NA	NA	NA	NA
WP_000742814.1\|2495655_2496681_+	aminoglycoside O-phosphotransferase APH(4)-Ia	NA	NA	NA	NA
WP_000602738.1\|2497102_2497855_-\|transposase	IS6 family transposase	A0A077SL39	Escherichia_phage	2.4e-41	44.7
WP_006581703.1\|2499665_2500151_+	hypothetical protein	NA	NA	NA	NA
WP_085940648.1\|2500347_2501438_-\|transposase	IS4 family transposase ISAba1	NA	NA	NA	NA
WP_001043260.1\|2501527_2502343_+	sulfonamide-resistant dihydropteroate synthase Sul2	NA	NA	NA	NA
WP_001445143.1\|2502625_2502877_-	hypothetical protein	NA	NA	NA	NA
WP_015344975.1\|2502907_2504401_-\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_001255015.1\|2504512_2504818_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_000214122.1\|2504845_2506060_-	chloramphenicol/florfenicol efflux MFS transporter FloR	S4TR35	Salmonella_phage	1.2e-18	28.7
WP_001447541.1\|2506276_2507161_-	DUF3363 domain-containing protein	NA	NA	NA	NA
WP_001067784.1\|2508085_2508790_+\|transposase	IS6-like element IS1006 family transposase	A0A077SL39	Escherichia_phage	1.9e-120	85.8
WP_046788546.1\|2508874_2509276_-	hypothetical protein	NA	NA	NA	NA
WP_015344976.1\|2509284_2512236_-\|transposase	Tn3-like element TnAs3 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	73.5
WP_000147567.1\|2512238_2512799_-	recombinase family protein	A0A1B0V7I5	Salmonella_phage	4.0e-49	86.2
WP_000454193.1\|2512924_2513275_-	DUF3330 domain-containing protein	NA	NA	NA	NA
WP_000845048.1\|2513477_2514491_-\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
WP_001456218.1\|2514657_2515500_+	alpha/beta fold putative hydrolase EstX	W8EKH7	Mycobacterium_phage	3.0e-08	26.1
WP_000050382.1\|2515595_2516204_+	HAD-IB family hydrolase	NA	NA	NA	NA
WP_001261740.1\|2516261_2517053_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2	NA	NA	NA	NA
2517284:2517298	attL	NA	NA	NA	NA
WP_000095725.1\|2517314_2518574_+	chloramphenicol efflux MFS transporter CmlA1	S4TR35	Salmonella_phage	4.8e-26	31.7
WP_001206316.1\|2518666_2519458_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1	NA	NA	NA	NA
WP_175216256.1\|2519937_2521263_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	8.4e-29	29.1
WP_175216257.1\|2521373_2521871_+	hypothetical protein	NA	NA	NA	NA
WP_000119696.1\|2521931_2522303_+	hypothetical protein	NA	NA	NA	NA
WP_001271300.1\|2522712_2523090_+	hypothetical protein	NA	NA	NA	NA
WP_175216258.1\|2523320_2524937_-	transcriptional antiterminator	NA	NA	NA	NA
WP_001243518.1\|2524937_2526464_-\|transposase	transposase	NA	NA	NA	NA
WP_001276994.1\|2526466_2528134_-	AAA family ATPase	NA	NA	NA	NA
WP_000267723.1\|2528130_2530239_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_001029679.1\|2530225_2531047_-	TnsA endonuclease N-terminal domain-containing protein	NA	NA	NA	NA
WP_004246586.1\|2531206_2533033_-	glutamine--fructose-6-phosphate transaminase (isomerizing)	M1I9J5	Paramecium_bursaria_Chlorella_virus	1.2e-131	44.6
WP_004246587.1\|2533190_2534564_-	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	A0A0N7G7P8	Chrysochromulina_ericina_virus	9.6e-28	32.3
WP_004246588.1\|2534714_2535131_-	F0F1 ATP synthase subunit epsilon	NA	NA	NA	NA
WP_004246589.1\|2535152_2536535_-	F0F1 ATP synthase subunit beta	NA	NA	NA	NA
WP_004246591.1\|2536569_2537433_-	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA
WP_004246592.1\|2537490_2539032_-	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA
WP_004246594.1\|2539046_2539580_-	F0F1 ATP synthase subunit delta	NA	NA	NA	NA
WP_004246595.1\|2539592_2540063_-	F0F1 ATP synthase subunit B	NA	NA	NA	NA
WP_004246596.1\|2540124_2540364_-	F0F1 ATP synthase subunit C	NA	NA	NA	NA
WP_004246597.1\|2540409_2541234_-	F0F1 ATP synthase subunit A	NA	NA	NA	NA
WP_004246598.1\|2541265_2541643_-	F0F1 ATP synthase subunit I	NA	NA	NA	NA
WP_004246599.1\|2542257_2542884_-	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA	NA	NA	NA
WP_004246600.1\|2542880_2544779_-\|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	NA	NA	NA	NA
WP_004249871.1\|2545158_2545599_-	FMN-binding protein MioC	NA	NA	NA	NA
WP_004246603.1\|2545699_2546161_-	transcriptional regulator AsnC	NA	NA	NA	NA
WP_004246604.1\|2546321_2547314_+	aspartate--ammonia ligase	A0A1C9C5F0	Heterosigma_akashiwo_virus	1.3e-50	37.5
WP_004246605.1\|2547314_2548772_-	ATPase RavA stimulator ViaA	NA	NA	NA	NA
WP_012368606.1\|2548779_2550279_-	ATPase RavA	A0A0N9PBE1	Sulfolobus_monocaudavirus	1.1e-21	37.3
WP_004246607.1\|2550559_2551486_+	ribokinase	NA	NA	NA	NA
WP_012368605.1\|2551567_2552965_-	multidrug transporter subunit MdtD	NA	NA	NA	NA
2552016:2552030	attR	NA	NA	NA	NA
WP_004249867.1\|2553045_2553732_-	FadR family transcriptional regulator	NA	NA	NA	NA
WP_004246615.1\|2559739_2560477_+	(Fe-S)-binding protein	NA	NA	NA	NA
WP_004246616.1\|2560467_2561886_+	iron-sulfur cluster-binding protein	NA	NA	NA	NA
WP_012368603.1\|2561889_2562582_+	lactate utilization protein C	NA	NA	NA	NA
WP_004246619.1\|2562600_2564232_-	phosphoethanolamine transferase	NA	NA	NA	NA
WP_004246620.1\|2564554_2566210_-	cation acetate symporter	NA	NA	NA	NA
WP_004246621.1\|2566206_2566518_-	DUF485 domain-containing protein	NA	NA	NA	NA
WP_004249862.1\|2566682_2568641_-	acetate--CoA ligase	A0A2H4PQU7	Staphylococcus_phage	3.7e-89	39.1
WP_004249861.1\|2569008_2569632_+	superoxide dismutase [Mn]	Q56AR7	Bacillus_thuringiensis_phage	6.4e-64	58.5
WP_107337235.1\|2569749_2570424_+	6-N-hydroxylaminopurine resistance protein	NA	NA	NA	NA
WP_036895833.1\|2570511_2570928_-\|transposase	IS200/IS605 family transposase	A0A1S5RHE3	Helicobacter_phage	7.6e-45	62.0
WP_175216259.1\|2570950_2572141_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A1B0VCD8	Salmonella_phage	5.9e-183	80.0

DBSCAN-SWA_9

3217695 : 3226545

Caulobacter_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_175215894.1\|3217695_3218841_-	phosphoribosyltransferase domain-containing protein	A0A172Q0Y1	Acinetobacter_phage	7.0e-32	27.4
WP_004245609.1\|3219233_3219818_+	TerD family protein	K4JRX3	Caulobacter_phage	4.2e-17	30.2
WP_049196993.1\|3219818_3220961_+	TerD family protein	NA	NA	NA	NA
WP_004245607.1\|3220985_3221441_+	tellurite resistance TerB family protein	NA	NA	NA	NA
WP_004245605.1\|3221475_3222501_+	TerC/Alx family metal homeostasis membrane protein	K7QKE8	Escherichia_phage	1.3e-74	47.9
WP_004249446.1\|3222568_3223147_+	tellurium resistance membrane protein TerD	K4JRX3	Caulobacter_phage	2.4e-33	41.5
WP_004245603.1\|3223223_3223799_+	TerD family protein	K4JRX3	Caulobacter_phage	1.2e-27	40.3
WP_004245602.1\|3223895_3224576_-	HAD-IB family hydrolase	NA	NA	NA	NA
WP_046334925.1\|3224976_3226545_+	chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	7.2e-11	33.7

DBSCAN-SWA_10

3857499 : 3865134

Proteus_phage(36.36%)

integrase

attL 3846611:3846625|attR 3861637:3861651

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3846611:3846625	attL	NA	NA	NA	NA
WP_071233768.1\|3857499_3858675_+\|integrase	site-specific integrase	G3CFG6	Escherichia_phage	1.7e-182	75.8
WP_036905342.1\|3858652_3858844_-	50S ribosomal protein L7/L12	NA	NA	NA	NA
WP_175215954.1\|3859056_3859659_-	DNA methyltransferase	G8C7S6	Escherichia_phage	7.9e-59	57.6
WP_049206331.1\|3859645_3860026_-	DUF2591 domain-containing protein	A0A2I7QP73	Vibrio_phage	1.2e-12	40.8
WP_167652470.1\|3860018_3860192_-	hypothetical protein	NA	NA	NA	NA
WP_049206330.1\|3860349_3860703_-	hypothetical protein	NA	NA	NA	NA
WP_049206329.1\|3860695_3860989_-	hypothetical protein	A0A1B0UY37	Roseobacter_phage	1.2e-15	44.8
WP_049206328.1\|3860988_3861285_-	hypothetical protein	NA	NA	NA	NA
WP_175215955.1\|3861322_3861505_-	hypothetical protein	NA	NA	NA	NA
WP_121910170.1\|3861523_3861787_-	hypothetical protein	A0A2P0P958	Salmonella_phage	8.0e-16	48.9
3861637:3861651	attR	NA	NA	NA	NA
WP_175215956.1\|3861858_3862296_-	single-stranded DNA-binding protein	A0A1W6JNW8	Morganella_phage	4.0e-12	35.4
WP_175216303.1\|3862273_3862672_-	HNH endonuclease	Q8SCL6	Pseudomonas_phage	2.4e-08	61.2
WP_036908295.1\|3862955_3863762_-	recombination protein RecT	A0A1P8DTF2	Proteus_phage	1.9e-145	98.9
WP_159298388.1\|3863754_3864573_-	PD-(D/E)XK nuclease-like domain-containing protein	A0A1P8DTH1	Proteus_phage	5.3e-159	97.8
WP_175215957.1\|3864569_3864824_-	hypothetical protein	A0A1P8DTG3	Proteus_phage	2.9e-39	96.4
WP_175215958.1\|3864951_3865134_-	hypothetical protein	A0A1P8DTH8	Proteus_phage	1.9e-16	73.3

DBSCAN-SWA_11

3869000 : 3906707

Salmonella_phage(24.39%)

terminase,holin,capsid,lysis

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004245991.1\|3869000_3869342_-	DUF3024 domain-containing protein	A0A1W6JP12	Morganella_phage	2.1e-37	62.8
WP_124725246.1\|3869350_3870034_-	LexA family transcriptional regulator	A0A1P8DTH0	Proteus_phage	2.7e-132	100.0
WP_004245989.1\|3870116_3870326_+	helix-turn-helix transcriptional regulator	A0A1P8DTF8	Proteus_phage	3.3e-33	98.6
WP_175215962.1\|3870436_3870784_+	hypothetical protein	A0A1P8DTF0	Proteus_phage	2.6e-06	35.4
WP_164484703.1\|3870880_3871057_+	hypothetical protein	NA	NA	NA	NA
WP_175215963.1\|3871049_3871886_+	replication protein	A0A1R3Y5R9	Salmonella_virus	3.6e-62	53.1
WP_175216304.1\|3871889_3873257_+	replicative DNA helicase	I6R0N4	Salmonella_phage	5.6e-161	64.0
WP_159363860.1\|3873253_3873520_+	hypothetical protein	NA	NA	NA	NA
WP_175215964.1\|3873558_3873762_+	hypothetical protein	NA	NA	NA	NA
WP_152964332.1\|3873772_3873940_+	hypothetical protein	NA	NA	NA	NA
WP_121910099.1\|3874030_3874690_-	DUF4145 domain-containing protein	V5URE2	Shigella_phage	3.1e-56	50.0
WP_175215965.1\|3874688_3874892_+	hypothetical protein	NA	NA	NA	NA
WP_126656360.1\|3874888_3875290_+	HNH endonuclease	E7EKU5	Edwardsiella_phage	2.7e-47	63.9
WP_104836685.1\|3875291_3875735_+	recombination protein NinB	K7P7B8	Enterobacteria_phage	8.1e-37	55.3
WP_175215966.1\|3875846_3876467_+	recombination protein NinG	A0A2I7RAC0	Vibrio_phage	1.5e-44	53.1
WP_049199110.1\|3876466_3876658_+	hypothetical protein	A0A1P8DTD3	Proteus_phage	2.3e-28	95.2
WP_036969493.1\|3876654_3877158_+	DUF1133 family protein	A0A1P8DTF1	Proteus_phage	4.0e-80	88.0
WP_036905447.1\|3877536_3878304_+	KilA-N domain-containing protein	G9BW66	Planktothrix_phage	1.3e-18	35.0
WP_014656499.1\|3878440_3878830_+	membrane protein	S4TRS4	Salmonella_phage	4.2e-13	35.0
WP_004918415.1\|3878826_3879120_+\|holin	phage holin family protein	NA	NA	NA	NA
WP_036976899.1\|3879106_3879439_+	M15 family metallopeptidase	F1BUL3	Cronobacter_phage	4.4e-35	70.3
WP_175215967.1\|3879440_3879890_+\|lysis	lysis protein	A0A1P8DTG0	Proteus_phage	1.9e-49	77.5
WP_064497290.1\|3879886_3880255_+	hypothetical protein	NA	NA	NA	NA
WP_175215968.1\|3880715_3881498_+	KilA-N domain-containing protein	K7PH51	Enterobacterial_phage	1.9e-52	43.3
WP_175215969.1\|3881528_3881792_+	hypothetical protein	NA	NA	NA	NA
WP_162837558.1\|3881834_3881996_+	hypothetical protein	NA	NA	NA	NA
WP_049199098.1\|3881988_3882171_+	hypothetical protein	A0A1W6JNV6	Morganella_phage	8.2e-20	74.1
WP_060556615.1\|3882187_3882613_+	hypothetical protein	A0A068CGC1	Acinetobacter_phage	1.1e-33	63.6
WP_161772457.1\|3882596_3883847_+\|terminase	PBSX family phage terminase large subunit	A0A1V0E5Q3	Salmonella_phage	3.9e-201	78.0
WP_175215970.1\|3883846_3885202_+	DUF1073 domain-containing protein	H6WRT0	Salmonella_phage	5.5e-161	63.6
WP_175215971.1\|3885152_3886082_+\|capsid	minor capsid protein	A0A1V0E5Q2	Salmonella_phage	6.6e-89	55.3
WP_175215972.1\|3886085_3887360_+	hypothetical protein	G0ZND7	Cronobacter_phage	3.4e-152	63.9
WP_175215973.1\|3887359_3887806_+	hypothetical protein	I6S1Q2	Salmonella_phage	3.3e-46	69.2
WP_175215974.1\|3887821_3888916_+	hypothetical protein	G0ZND9	Cronobacter_phage	5.9e-145	68.3
WP_004247764.1\|3888925_3889099_+	hypothetical protein	I6R9A3	Salmonella_phage	1.4e-08	51.8
WP_004247765.1\|3889155_3889554_+	hypothetical protein	I6S619	Salmonella_phage	3.5e-55	78.8
WP_036905483.1\|3889553_3889895_+	hypothetical protein	A0A1W6JNW7	Morganella_phage	1.2e-24	52.4
WP_175215975.1\|3889896_3890268_+	HK97 gp10 family phage protein	G0ZNE3	Cronobacter_phage	1.1e-39	65.0
WP_036905489.1\|3890264_3890633_+	hypothetical protein	F1C5E4	Cronobacter_phage	2.0e-09	28.7
WP_175215976.1\|3890698_3891454_+	Ig-like domain-containing protein	A0A1W6JNT1	Morganella_phage	2.0e-104	76.9
WP_175215977.1\|3891503_3892193_+	hypothetical protein	A0A1W6JNX2	Morganella_phage	9.9e-90	71.1
WP_060554542.1\|3892441_3893311_+	hypothetical protein	NA	NA	NA	NA
WP_060554543.1\|3893333_3893585_+	hypothetical protein	NA	NA	NA	NA
WP_060554544.1\|3893574_3894027_+	hypothetical protein	NA	NA	NA	NA
WP_036907985.1\|3894182_3894593_+	hypothetical protein	B9UDL3	Salmonella_phage	2.5e-48	71.1
WP_062814383.1\|3894671_3895391_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_113977027.1\|3895716_3896289_+	hypothetical protein	H6WRU8	Salmonella_phage	4.6e-32	58.4
WP_175216305.1\|3896408_3897179_+	Rha family transcriptional regulator	A0A2I7RX10	Vibrio_phage	2.7e-43	40.3
WP_063693349.1\|3897301_3897709_+	hypothetical protein	NA	NA	NA	NA
WP_175215978.1\|3897780_3900957_+	hypothetical protein	A0A1W6JNU2	Morganella_phage	1.7e-83	39.6
WP_004247775.1\|3900960_3901437_+	hypothetical protein	F1C5F0	Cronobacter_phage	3.3e-60	72.3
WP_175215979.1\|3901436_3901907_+	DUF1833 family protein	F1C5F1	Cronobacter_phage	2.0e-41	51.3
WP_175215980.1\|3901903_3902296_+	C40 family peptidase	F1C5F2	Cronobacter_phage	2.7e-44	58.7
WP_175215981.1\|3902282_3904751_+	MoaD/ThiS family protein	F1C5A7	Cronobacter_phage	2.3e-253	52.0
WP_175215982.1\|3904808_3906707_+	hypothetical protein	F1C5A8	Cronobacter_phage	2.3e-48	69.3

DBSCAN-SWA_12

4014212 : 4031577

Escherichia_phage(21.43%)

tail,plate,holin,lysis

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060554763.1\|4014212_4015028_+	antitermination protein	M9NZB0	Enterobacteria_phage	1.6e-54	43.3
WP_004248367.1\|4015408_4015708_+\|holin	phage holin, lambda family	A0A1P8DTE4	Proteus_phage	1.9e-21	51.0
WP_012368092.1\|4015710_4016115_+	hypothetical protein	A0A0A0RQM4	Escherichia_phage	1.7e-25	47.9
WP_175215995.1\|4016111_4016561_+\|lysis	lysis protein	NA	NA	NA	NA
WP_012368090.1\|4016597_4017110_+	hypothetical protein	NA	NA	NA	NA
WP_012368089.1\|4017118_4018606_+	DUF3383 domain-containing protein	A0A088C3U1	Shewanella_sp._phage	4.2e-77	35.7
WP_175215996.1\|4018616_4019069_+	hypothetical protein	NA	NA	NA	NA
WP_004243627.1\|4019128_4019587_+	hypothetical protein	Q6IWV4	Burkholderia_phage	1.9e-25	48.5
WP_004250717.1\|4019669_4021973_+	hypothetical protein	A0A2H5BG44	Pseudoalteromonas_phage	1.1e-15	23.3
WP_004250719.1\|4021975_4022464_+	hypothetical protein	NA	NA	NA	NA
WP_004243623.1\|4022476_4022797_+	hypothetical protein	NA	NA	NA	NA
WP_004243622.1\|4022765_4023578_+	hypothetical protein	Q6IWQ0	Burkholderia_phage	9.0e-42	39.2
WP_049197272.1\|4023580_4024273_+	hypothetical protein	A1Z003	Burkholderia_virus	1.6e-34	37.1
WP_004243617.1\|4024269_4024614_+	hypothetical protein	NA	NA	NA	NA
WP_175215997.1\|4024606_4025794_+\|plate	baseplate J/gp47 family protein	A0A2H5BG53	Pseudoalteromonas_phage	1.9e-72	37.7
WP_004243615.1\|4025790_4026447_+	DUF2612 domain-containing protein	Q6IWQ4	Burkholderia_phage	2.3e-35	39.9
WP_049203165.1\|4027629_4028049_+\|tail	tail fiber assembly protein	F1BUK2	Cronobacter_phage	5.4e-06	35.9
WP_175215998.1\|4028195_4028618_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_126656698.1\|4028773_4028953_-	GhoT/OrtT family toxin	NA	NA	NA	NA
WP_063108406.1\|4029521_4030064_+	DUF924 domain-containing protein	A0A1V0SIY0	Klosneuvirus	3.2e-19	34.7
WP_004243611.1\|4030179_4030956_-	dimethyl sulfoxide reductase anchor subunit	A0A077SK59	Escherichia_phage	5.1e-42	39.8
WP_004243609.1\|4030959_4031577_-	dimethylsulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	1.3e-88	67.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage