CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP052090	Ralstonia solanacearum strain FJAT15340.F6 chromosome, complete genome	1 crisprs	cas3,WYL,RT,csa3,DEDDh,DinG	0	1	7	0
NZ_CP052091	Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence	3 crisprs	RT,WYL	0	4	3	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP052090_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP052090_1

2182563-2182673

Orphan

Consensus_repeat	Method
GCGGACGGCTCGGGACGAATATAGGGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP052090_1

>merge|NZ_CP052090|1|2182563-2182673|CRISPRCasFinder
GCGGACGGCTCGGGACGAATATAGGGATGGGAAGCGCTGTTGGCGGCGCGCCCGGACGGGGCGCCCTGCTCCGGCAGCGGAGGCGCGGACGGCTCGGGACGAACATAGGGA

>NZ_CP052090|1|1|2182563-2182673|CRISPRCasFinder
GCGGACGGCTCGGGACGAATATAGGGA	TGGGAAGCGCTGTTGGCGGCGCGCCCGGACGGGGCGCCCTGCTCCGGCAGCGGAGGC
GCGGACGGCTCGGGACGAACATAGGGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP052090.1\|WP_071623472.1\|2186088_2187834_-\|thiamine-pyrophosphate-binding-protein	unknown	unknown	gnl\|CDD\|181285
NZ_CP052090.1\|WP_071507020.1\|2176238_2176940_-\|haloacid-dehalogenase-type-II	unknown	unknown	gnl\|CDD\|130495
NZ_CP052090.1\|WP_049832877.1\|2174573_2176154_-\|malate-synthase-A	unknown	unknown	gnl\|CDD\|236432
NZ_CP052090.1\|WP_011001296.1\|2193694_2194813_-\|sulfate-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213263
NZ_CP052090.1\|WP_071623470.1\|2185148_2185562_-\|gamma-glutamylcyclotransferase	unknown	unknown	gnl\|CDD\|225016
NZ_CP052090.1\|WP_071623473.1\|2190470_2192528_-\|type-III-effector-protein	unknown	unknown	gnl\|CDD\|339245
NZ_CP052090.1\|WP_071623471.1\|2185554_2186061_-\|ribonuclease-E-activity-regulator-RraA	unknown	unknown	gnl\|CDD\|236487
NZ_CP052090.1\|WP_071623469.1\|2183105_2184971_-\|GALA-protein	unknown	unknown	gnl\|CDD\|275380
NZ_CP052090.1\|WP_028860519.1\|2178930_2180235_-\|isocitrate-lyase	unknown	unknown	gnl\|CDD\|237893
NZ_CP052090.1\|WP_011001314.1\|2172436_2173900_-\|DHA2-family-efflux-MFS-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|129794
NZ_CP052090.1\|WP_028852990.1\|2192676_2193660_-\|CysB-family-HTH-type-transcriptional-regulator	unknown	unknown	gnl\|CDD\|237172
NZ_CP052090.1\|WP_016722033.1\|2172115_2172385_+\|acyl-CoA-binding-protein	unknown	unknown	gnl\|CDD\|226731
NZ_CP052090.1\|WP_011001313.1\|2173996_2174467_-\|DUF1857-family-protein	unknown	unknown	gnl\|CDD\|176872
NZ_CP052090.1\|WP_020371745.1\|2178365_2178800_+\|universal-stress-protein	unknown	unknown	gnl\|CDD\|366180
NZ_CP052090.1\|WP_011001309.1\|2177359_2178289_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176114
NZ_CP052090.1\|WP_019718111.1\|2189979_2190273_-\|2TM-domain-containing-protein	unknown	unknown	gnl\|CDD\|379083
NZ_CP052090.1\|WP_020831875.1\|2187918_2188731_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225818
NZ_CP052090.1\|WP_011001316.1\|2171231_2171963_-\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-dimerization-subunit-type-1-TsaB	unknown	unknown	gnl\|CDD\|274750
NZ_CP052090.1\|WP_016722048.1\|2194809_2195790_-\|sulfate-ABC-transporter-permease-subunit-CysW	unknown	unknown	gnl\|CDD\|226665
NZ_CP052090.1\|WP_158594550.1\|2180478_2180631_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP052090.1\|WP_071623472.1\|2186088_2187834_-\|thiamine-pyrophosphate-binding-protein	gnl\|CDD\|181285	PRK08199, PRK08199, thiamine pyrophosphate protein; Validated.	0
NZ_CP052090.1\|WP_071507020.1\|2176238_2176940_-\|haloacid-dehalogenase-type-II	gnl\|CDD\|130495	TIGR01428, Haloacetate_dehalogenase, 2-haloalkanoic acid dehalogenase, type II. Catalyzes the hydrolytic dehalogenation of small L-2-haloalkanoic acids to yield the corresponding D-2-hydroxyalkanoic acids. Belongs to the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), class (subfamily) I. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.	9.44396e-91
NZ_CP052090.1\|WP_049832877.1\|2174573_2176154_-\|malate-synthase-A	gnl\|CDD\|236432	PRK09255, PRK09255, malate synthase; Validated.	0
NZ_CP052090.1\|WP_011001296.1\|2193694_2194813_-\|sulfate-ABC-transporter-ATP-binding-protein	gnl\|CDD\|213263	cd03296, ABC_CysA_sulfate_importer, ATP-binding cassette domain of the sulfate transporter. Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.	1.25082e-167
NZ_CP052090.1\|WP_071623470.1\|2185148_2185562_-\|gamma-glutamylcyclotransferase	gnl\|CDD\|225016	COG2105, COG2105, Uncharacterized conserved protein [Function unknown].	4.75238e-29
NZ_CP052090.1\|WP_071623473.1\|2190470_2192528_-\|type-III-effector-protein	gnl\|CDD\|339245	pfam14496, NEL, C-terminal novel E3 ligase, LRR-interacting. This NEL or novel E3 ligase domain is found at the C-terminus of bacterial virulence factors. Its sequence is different from those of the eukaryotic HECT and RING-finger E3 ligases, and it subverts the host ubiquitination process. At the N-terminus of the family-members there is a series of LRR repeats, and the NEL domain interacts with the most N-terminal repeat. The key residue for the ligation step is the cysteine, eg found at position 386 in UniProtKB:E7K2H2. The LRR section sequesters this active site until invasion has occurred.	6.28939e-52
NZ_CP052090.1\|WP_071623471.1\|2185554_2186061_-\|ribonuclease-E-activity-regulator-RraA	gnl\|CDD\|236487	PRK09372, PRK09372, ribonuclease E inhibitor RraA.	6.66157e-96
NZ_CP052090.1\|WP_071623469.1\|2183105_2184971_-\|GALA-protein	gnl\|CDD\|275380	sd00033, LRR_RI, leucine-rich repeats, ribonuclease inhibitor (RI)-like subfamily. A leucine-rich repeat (LRR) is a structural protein motif of 20-30 amino acids that is unusually rich in the hydrophobic amino acid leucine. The conserved eleven-residue sequence motif (LxxLxLxxN/CxL) within the LRRs corresponds to the beta-strand and adjacent loop regions, whereas the remaining parts of the repeats are variable. LRRs fold together to form a solenoid protein domain, termed leucine-rich repeat domain. Leucine-rich repeats are usually involved in protein-protein interactions.	3.37876e-34
NZ_CP052090.1\|WP_028860519.1\|2178930_2180235_-\|isocitrate-lyase	gnl\|CDD\|237893	PRK15063, PRK15063, isocitrate lyase; Provisional.	0
NZ_CP052090.1\|WP_011001314.1\|2172436_2173900_-\|DHA2-family-efflux-MFS-transporter-permease-subunit	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	4.46633e-68
NZ_CP052090.1\|WP_028852990.1\|2192676_2193660_-\|CysB-family-HTH-type-transcriptional-regulator	gnl\|CDD\|237172	PRK12683, PRK12683, transcriptional regulator CysB-like protein; Reviewed.	0
NZ_CP052090.1\|WP_016722033.1\|2172115_2172385_+\|acyl-CoA-binding-protein	gnl\|CDD\|226731	COG4281, ACB, Acyl-CoA-binding protein [Lipid metabolism].	2.01415e-46
NZ_CP052090.1\|WP_011001313.1\|2173996_2174467_-\|DUF1857-family-protein	gnl\|CDD\|176872	cd08863, SRPBCC_DUF1857, DUF1857, an uncharacterized ligand-binding domain of the SRPBCC domain superfamily. Uncharacterized family of the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain superfamily. SRPBCC domains have a deep hydrophobic ligand-binding pocket and they bind diverse ligands. SRPBCC domains include the steroidogenic acute regulatory protein (StAR)-related lipid transfer (START) domains of mammalian STARD1-STARD15, the C-terminal catalytic domains of the alpha oxygenase subunit of Rieske-type non-heme iron aromatic ring-hydroxylating oxygenases (RHOs_alpha_C), Class I and II phosphatidylinositol transfer proteins (PITPs), Bet v 1 (the major pollen allergen of white birch, Betula verrucosa), CoxG, CalC, and related proteins. Other members of the superfamily include PYR/PYL/RCAR plant proteins, the aromatase/cyclase (ARO/CYC) domains of proteins such as Streptomyces glaucescens tetracenomycin, and the SRPBCC domains of Streptococcus mutans Smu.440 and related proteins.	2.21381e-54
NZ_CP052090.1\|WP_020371745.1\|2178365_2178800_+\|universal-stress-protein	gnl\|CDD\|366180	pfam00582, Usp, Universal stress protein family. The universal stress protein UspA is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. UspA enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae UspA reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, though UspA lacks ATP-binding activity.	5.66819e-31
NZ_CP052090.1\|WP_011001309.1\|2177359_2178289_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176114	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain. This CD includes the substrate binding domain of LysR-type transcriptional regulator (LTTR) CrgA and its related homologs. The LTTRs are acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes such as amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to name a few. In contrast to the tetrameric form of other LTTRs, CrgA from Neisseria meningitides assembles into an octameric ring, which can bind up to four 63-bp DNA oligonucleotides. Phylogenetic cluster analysis further showed that the CrgA-like regulators form a subclass of the LTTRs that function as octamers. The CrgA is an auto-repressor of its own gene and activates the expression of the mdaB gene which coding for an NADPH-quinone reductase and that its action is increased by MBL (alpha-methylene-gamma-butyrolactone), an inducer of NADPH-quinone oxidoreductase. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.22847e-92
NZ_CP052090.1\|WP_019718111.1\|2189979_2190273_-\|2TM-domain-containing-protein	gnl\|CDD\|379083	pfam13239, 2TM, 2TM domain. This short region contains two transmembrane alpha helices that are found associated with a wide range of other domains. This domain may be involved in cell lysis or peptidoglycan turnover.	3.64655e-14
NZ_CP052090.1\|WP_020831875.1\|2187918_2188731_-\|response-regulator-transcription-factor	gnl\|CDD\|225818	COG3279, LytT, Response regulator of the LytR/AlgR family [Transcription / Signal transduction mechanisms].	9.38409e-65
NZ_CP052090.1\|WP_011001316.1\|2171231_2171963_-\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-dimerization-subunit-type-1-TsaB	gnl\|CDD\|274750	TIGR03725, T6A_YeaZ, tRNA threonylcarbamoyl adenosine modification protein YeaZ. This family describes a protein family, YeaZ, now associated with the threonylcarbamoyl adenosine (t6A) tRNA modification. Members of this family may occur as fusions with ygjD (previously gcp) or the ribosomal protein N-acetyltransferase rimI, and is frequently encoded next to rimI. [Protein synthesis, tRNA and rRNA base modification].	3.2287e-55
NZ_CP052090.1\|WP_016722048.1\|2194809_2195790_-\|sulfate-ABC-transporter-permease-subunit-CysW	gnl\|CDD\|226665	COG4208, CysW, ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism].	4.60094e-163

>NZ_CP052090.1|WP_158594550.1|2180478_2180631_+|hypothetical-protein
MKDGHGAAQCAIFADQNIFPHYEKTSATDPHPLTASATAARRFPEKALRM
>NZ_CP052090.1|WP_028860519.1|2178930_2180235_-|isocitrate-lyase
MSRELEVKALQQEWDTNPRWKGIKRGYTAQDVVRLRGSLQIEHTLARRGAEKLWTLMNSEPFVNALGALTGNQAMQQVKAGLKAIYLSGWQVAGDANSNGEMYPDQSLYSVDSVPKVVKRINNTFQRADQIQWSEGKDDVDFFAPIVADAEAGFGGVLNAFELMKAMIEAGAAGVHFEDQLAAVKKCGHMGGKVLVPTREAVSKLVAARLAADVMGVPTVLIARTDAEAADLLTADVDDNDRPFCTGERTVEGFYRTKPGLQQAIARGLAYADYADLVWCETGKPDLEYAKKFAEAIHAKFPGKMLAYNCSPSFNWKKNLDDATIAKFQKELGAMGYKFQFITLAGFHALNYSMFNLAHGYARNQMSAFVELQEAEFAAAEKGFTAVKHQREVGTGYFDAVTQTIERDASTTALKGSTEDEQFFEEKAHAKKVA
>NZ_CP052090.1|WP_020371745.1|2178365_2178800_+|universal-stress-protein
MFQHILIPTDGSELSRKAVAGALDFAKTLGARLTAYTCLEEYPYTPFSEIVVETPQAFKERVEAQARVVLKDVEDTARAAGIDCDTDMSCFAVPYMGIIDAAERHGCDVIFMASHGRRGLAGLLLGSETQKVLTHTAIPVIVYR
>NZ_CP052090.1|WP_011001309.1|2177359_2178289_+|LysR-family-transcriptional-regulator
MAHFKQLETFVAVATRGSLSAAAAAEGVAPAIIGRRIDALEERLGVKLLVRTTRRITLTFEGSAFLEDCQRILNDLHNAEASVSAGGVKASGHLRVTAPAGFGRRHVAPMVPDFLAAHPDVSITLDLGDRIVDLVNEGFDCAIRLGDLPDSSLVSIRLWENRRVVVAAPAYLERRGRPEQLEQLAGHNCLAFGASANVQRGWVFQQGGKTVTVKVGGTMECTDGAVLREWCLQGHGLAWRSWWEVGHDIATGRLVTVLDAFEAPPIGIHAVFPQRKHLPLRVRLLIDFLKNTYGNPAYWRRADPTLLTD
>NZ_CP052090.1|WP_071507020.1|2176238_2176940_-|haloacid-dehalogenase-type-II
MTSIRAVVFDAYGTLFDVYSVAARAEQLFPGKGEALSVLWRDRQIDYTRIRSLAGPSGEHYKPFWDVTVDALRYACARLNLPLGNHAEATLMREYACLSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDHVLSVDAVRLYKTVPAAYALAPRAFGVPAAQILFVSSNGWDACGATWHGFTTFWINRLGHPPEALDVAPAAAGHDMRDLLQFVQARQSMR
>NZ_CP052090.1|WP_049832877.1|2174573_2176154_-|malate-synthase-A
MELTLPQGMEIKAEILPAYEDILTPEALALVARLHRAFEPRRQQLLAERAERVKRLDAGERPDFLPETRHIREGDWTIAPIPPALECRRVEITGPVEAKMVINAFNSGADSYMTDFEDSNAPSWHNQIQGQVNLKAAIRRTLTLESGGKSYKLNDKIATLQVRPRGWHLDEKHVTVDGQRVSGGIFDFALFLFHNAREQLARGAGPFFYLPKMESHLEARLWNDVFIAAQDALGLPRGTIKATVLIETILAAFEMDEILYELREHSAGLNAGRWDYIFSCIKKFKVDQNFCLADRAKVTMTSPFMRAYALLLLKTCHKRNAPAMGGMSALIPIKNDPEKNAVAMQGIINDKKRDATDGYDGGWVAHPGLVEAAMKEFVDVLGDAPNQIGKQRPDVNVAAADLLNFQPEQPITEAGLRMNINVGIHYLGAWLAGNGCVPIHNLMEDAATAEISRSQVWQWIRSPKGTLEDGTKVTAELVRKLIPEELAKVKADGAVGHFDRAAQIFEQMSTSESFSEFLTLPLYEEL
>NZ_CP052090.1|WP_011001313.1|2173996_2174467_-|DUF1857-family-protein
MRFEHLVEVNDPLNPLMDALTLNQIWQGLVLRVLEPTEFVEGLDEGIITARGEGWVERELRFGKARIQDRVTLEPHQRVTYTTAATGEHAGGSLTMTIETNEANAAFIRFVYDTTLPSADETGDTRYAEIVKSAYREADIDTVRRIREFAAIGRLG
>NZ_CP052090.1|WP_011001314.1|2172436_2173900_-|DHA2-family-efflux-MFS-transporter-permease-subunit
MATFTPTLETLRARHGERFKWLVLFTLTVGAVSSIISATIVNVAIPDLSRHFVLGQERAQWVSASFMVAMTLAMLLTPWLLLRFGLRRTFIGALLLLGVGGLVGGLSPTYGVMIAMRVVGGVAAGIMQPLPNILILRVFPEREQGKAFGLFGFGVVLAPALGPSLGGFLVELFGWRSIFFVVVPFTLLGWAMARRFMAINSSMAGEPKPLDWRGLLLVGAATVALLNGLVELHADVTRGVALMAVSAVCLAVFLFWQRRVESPLLDLRLFSYRQFAMGAVVAFIYGAGLYGSTYLLPVYMQVALAYTPSSAGLVLLPPGLALAATIVVAGRLTSRIEPYRLVSFGLAALAVSFLLMTTNTRATGYLLLIGIAAIGRVGLGFVLPSLSLGAMRGVDFTLIPQGSSAVNFLRQLGGAIGVSATGIFLQWRLAARGIGAVGGVAVDPEARIVACDETFVFLGVLCALAVAAAWRMRRREPAAVVSAGVGP
>NZ_CP052090.1|WP_016722033.1|2172115_2172385_+|acyl-CoA-binding-protein
MSDLQTRFEQAQTDVKSLSERPSNMTLLRLYALFKQGSEGDAHGDKPGFTDIVGRYKYEAWAGLKGLSQDDARQKYIDLVEELKSGATT
>NZ_CP052090.1|WP_011001316.1|2171231_2171963_-|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-dimerization-subunit-type-1-TsaB
MPWILAFDTSTEFCSVALGDGTRTLFRHEHTGARSSSRVLPAAGELLAEAGIALGDCAAIAFGAGPGSFTGLRTACGVAQGLAFGAGLPVVQVNSLMACAEQTRAALPAGTAVTVALDARMDECYWASFVPVAEDASGWHALSAVQVSAPQAVAPPQQPYWLAGNAAAVFGDRLAAATGAAAVLPDVAPHAREIVTLGLRLLAAGHTVRPEDAAPLYVRDKVALTIEERQAVQQAKAAAGARA
>NZ_CP052090.1|WP_071623469.1|2183105_2184971_-|GALA-protein
MVSRIPTGNRGQGNGIEQSASPRATEATPWLGVNLPYGHWLPSSARSVVSRASSLLGGLANFRWGGPSASARPAPNIRSAAIAPEQQTLPPELWQQIATLAGARPRRAMREVSLELRNASRAVVTHLTISDPAMFRQLSLYPALKSVRFKGALTLEALKALPPTLEHLEIGRCTGSAISAEGLAHLAAMPLKSLNLNGIEIGVEGARTLAASKSLVSLSLIGCGIGDRAAQALAASRSIRSLDLSVNMIGRDGAQALADAPLVSLNLYSNEIGDDGARALATSRTLTSLEVRRNGIGNAGAGAFANNTVLRKLNLANNMIDKRGARVLAGNTSLTELDLGGNRLGDKGARALAGNRSLLSLKVDHNEISDEGVQALAQHATLRSLDLSFNFVGLQGAGALGGNTRLSELNLSLCGINSYSASALARNKSLASLYLNGNRIGDDGARALAKNSTLTLLDLSRNNIQNAGAEALGGNQALISLKLAGNGIDDDGAAALARHPRLTTLDLSQNRIGSEGARHLAQSVTLAELDLSENRIGPEGAKALSLSTVLTTLKVIDNAIGEDGARALADSTSLISLDARRNGIGEDGAKVLEANTRITGTQQNPNFLAEDVPRPDVRWRD
>NZ_CP052090.1|WP_071623470.1|2185148_2185562_-|gamma-glutamylcyclotransferase
MTEAIHVFAYGTLRAGEANDLRVAASRRGIAEPKLIGHATLHGRLYDFGAYPGLVPDPTGTAVRGDVYRIDPGLVPVLDAIEAVYPGGDALFLRETHTVMLGSEPLDCIVYPVSAAQVTGRHVITSGDWVAYRLARG
>NZ_CP052090.1|WP_071623471.1|2185554_2186061_-|ribonuclease-E-activity-regulator-RraA
MTTMMIPVTDLCDAHEDRLASGAVRVLAPVFRSFGARAAFAGPAATLKVFEDNGLVRAVLEQPGEGRVLVVDGGGSLRCALVGGNLAKLAEDNGWEGVLVNGCVRDTRELAACNVGVHALAAHPRKSFKKNQGERDIGVQMPGAYIHPGEWIYGDEDGVLVSRERLHD
>NZ_CP052090.1|WP_071623472.1|2186088_2187834_-|thiamine-pyrophosphate-binding-protein
METAVARPVSTGPTDSTGSGSRPVPRHGGQILVDALIAHGTDLAFGVPGESYLAVLEGFYQRRDRARFIVCRQEGGAATMADAHGKLTGRPGIVFCTRGPGATNASIGVHTAFQDSTPLILFIGQVGRDCVDREAFQEIDYRRMFGQMAKWVAQIDSVERIPEYIARAFQTATAGRPGPVVLALPEDMLTEVATVADVPPMPRAMAWPAPHDLARLKALLGRAERPLVLLGGAGWTPQAAARLQAFAERWRLPVGCVFRRQDLFDNRHPNYAGDVGIAINPKLAARVREADVVLAIGTRLGEMATSGYTLFDVPRPRQTLIHVHAGAEELGRVYQADLMIHAAMPAIAEALDGVAPDAPPRWQAWTEAAHADYLANIAPPPFAGRGIDLARAMQWLRERLPRNAILTNGAGNYATWLHRFYQYGPLAAGSRTQLAPTSGAMGYGAPAAVAAKIVCPQTPVICLAGDGCFLMNGQELATAMQYRAPVIFIVVNNGMYGTIRMHQERAYPEHVSGTELRNPDFAALARAYGAEGHTVRSLEGFQAAVEAALAAPVATVIEVQTDPEIISPRATLQSLRAQARG
>NZ_CP052090.1|WP_020831875.1|2187918_2188731_-|response-regulator-transcription-factor
MPIAPRLLIADDEPALADSLIAELAALWPGARIAPAVHDGQSALDAIDRPRAGEAPDVVFLDIRMPGLSGIEVARELAGRAQRPLVVFVTAYDQFALDAFEQAAVDYVLKPVQTERLAATVRRLKARLAERPDGGAAADSAQTLAQLVERLAGLPAAGGANGAYLRFIKALVGQEIRFIPVEEVLYLEATDKYVNVVTHAGASLIRTSLRELLSQLDPQHFWQVHRGTVVNVAHVASAVHLSLGRLALKIRGRTETLPVARQYAHLFRQM
>NZ_CP052090.1|WP_019718111.1|2189979_2190273_-|2TM-domain-containing-protein
MSATTFPASDDAALLHRARRRAGARMGLRIHLLAFLAVNLMLAAMALSHGQSWFVWPLLAWGVGLAAHGLGLAWALGSGYRRLVDRELARLRNQAGR
>NZ_CP052090.1|WP_071623473.1|2190470_2192528_-|type-III-effector-protein
MPTRVPSPTLGRSHPVTGAASTATSTAATATRSGPATAPASGRSREGLLAELPTGRTARTPSVSAAGAHAGRPAWNVQGAIEAMAALSPEREKRLFKKSASPQYRYAKGLTAEQRGQLESALEQRFRNPAAPAEARDSALAMWLSVQQARLRTHTAGHRNHHNLEQFQLAALSVPIPLLALGYRRQRRRYYSSPLRPEYRTAFNNFMRVIGDPSLSEAVRQTVAQRLEYHRRSEETIARHERQLLGEHGVMGLAESGYQIGTNYDHVNLTALEREAVVESRGSGVPPALHIQALQTERSRVESGALRHQWLTRELRDAQARAGQGGAVAGSAGPSSVRQVDAAESSAAAARLRRDTANDIRRLRRPLAAEIKQWLKLAHAEPLPDPKAFDNELYANAFARLLERRRPLSLISYFARWDPVVVDGAKVIQAIAKDANLRKDVFAAAETALGTCGDNVADGFANIVTMVDTHQLVDDVRSGKLDQPALEAWGRQRYRLDSLITEVNQWMASRRRQAGQHSIMTERRVAREPLETMLHAKVALKTVLDLPKNLPSSMRHRLASALKPDDLKRLAETVQAKEADPVELARYLLSNDAWRGAMKALHPAAFAALRKRFAPEKDALAKEIPPQPTDPEGLEFLDERMAYAERTDAFTQKCRAAEDTLLLSLAGRYALVPAVVGAGPSQGSR
>NZ_CP052090.1|WP_028852990.1|2192676_2193660_-|CysB-family-HTH-type-transcriptional-regulator
MNFQQLRSIREAVRRQFNLTEVANALYTSQPGVSRQIRELEDELGVEIFERYGKRLTGLTEPGREIVRIVERLLLEAENLRQAGEEFSGRQSGRLTVATTHTQARYALPKVVQAFRKAYPHVTLALQEASPSHIVELLLTGQADIGVATEAVASEPGLTSFEAYRWRHVLVVSPDHPLTKNPLPALEDVAQYPLITYDAGFTGRRNIDAAFAGAGLQPEIVLTAMDADVIKTYVALDVGVGIIASMAYDGRKDDNLVCIGADHLFEPNTTRVAVRRGAYLRGYAHDFIGMFAPHLSREAVAEAVASTVVAQPARPALVASSRQTLAA
>NZ_CP052090.1|WP_011001296.1|2193694_2194813_-|sulfate-ABC-transporter-ATP-binding-protein
MSIQVQHVTKRFGNFVALDDVSLAFRQGELTALLGPSGCGKTTLLRIIAGLEHADAGTILLNGEDASDRHVRERQVGFVFQHYALFKHMTVFENVAFGLRVKPRAQRPSEAQIRAKVKALLELVQLDWLAERYPPQLSGGQRQRIALARALAVEPRVLLLDEPFGALDAKVRKELRRWLRRLHDDLHVTSLFVTHDQEEALEVADSVVLMNRGQVEQVGSPDAVYNTPATPFVYGFLGNVNLFHGRLEAGEGGSVLHVGETALSVPPGGVDASRADQAVAFVRPHEIDLERYAPGAEGIPVTLRRALTLGAVAQLELERTDSDDIIEVSLPIERFRAQGLREGETLVVRPRAIRVFAQGQGSEHAAAAQAAA
>NZ_CP052090.1|WP_016722048.1|2194809_2195790_-|sulfate-ABC-transporter-permease-subunit-CysW
MAATVSRQPGQAPAAARRGATAEAAWVRAALILVSFAFLALFLFVPLASVFYEALRKGLDVYWAALAEPDALSAITLTLSVAAIAVPLNVVFGVAAAWAIAKFEFRGKNLLLTLIDLPFSVSPVIAGLVYVLLFGAQGWFGSALSAHDFKVIFAVPGIVLATVFVTFPFVARELIPLMQAQGSEEEEAAIVLGASGWQTFFRVTLPKIKWGLLYGVILCNARAMGEFGAVSVVSGHIRGLTNTMPLHVEILYNEYDFAAAFAVASLLTLLALVTLALKTLVEWRSRRELADADAGVGEGPGRHAAPQPLSSHPHVRVQSPLEGSAA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP052090_1	1.1\|2182590\|57\|NZ_CP052090\|CRISPRCasFinder	2182590-2182646	57	NZ_CP025986	Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence	1200220-1200276	0	1.0

1. spacer 1.1|2182590|57|NZ_CP052090|CRISPRCasFinder matches to NZ_CP025986 (Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence) position: , mismatch: 0, identity: 1.0

tgggaagcgctgttggcggcgcgcccggacggggcgccctgctccggcagcggaggc	CRISPR spacer
tgggaagcgctgttggcggcgcgcccggacggggcgccctgctccggcagcggaggc	Protospacer
*********************************************************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

198889 : 218657

Acidithiobacillus_phage(94.12%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_119417463.1\|198889_199363_-	hypothetical protein	K4I1C7	Acidithiobacillus_phage	1.5e-36	52.6
WP_119417464.1\|199359_199734_-	site-specific recombinase resolvase	K4HZX2	Acidithiobacillus_phage	2.1e-41	64.6
WP_119889762.1\|199730_201119_-	recombinase family protein	K4ICM1	Acidithiobacillus_phage	7.8e-219	82.1
WP_119889763.1\|201115_201565_-	DUF2924 domain-containing protein	K4I3X1	Acidithiobacillus_phage	6.7e-55	71.6
WP_080511075.1\|201564_201783_-	hypothetical protein	K4HZ94	Acidithiobacillus_phage	1.3e-11	60.3
WP_043876685.1\|201934_202609_+	hypothetical protein	NA	NA	NA	NA
WP_011003129.1\|202608_202896_+	hypothetical protein	NA	NA	NA	NA
WP_100226524.1\|202950_204111_-	hypothetical protein	NA	NA	NA	NA
WP_119889764.1\|204240_206478_-	hypothetical protein	K4I1D0	Acidithiobacillus_phage	1.2e-290	66.2
WP_089190379.1\|206527_206989_-	helix-turn-helix domain-containing protein	K4ICM4	Acidithiobacillus_phage	8.4e-45	61.4
WP_089190378.1\|207217_207481_+	DNA-binding protein	K4I3X3	Acidithiobacillus_phage	5.3e-20	69.3
WP_028852742.1\|207491_207974_+	hypothetical protein	K4HZ96	Acidithiobacillus_phage	5.2e-45	58.7
WP_071507378.1\|207970_208831_+	ATP-binding protein	K4HZX9	Acidithiobacillus_phage	3.4e-108	71.3
WP_029240163.1\|208827_209469_+	hypothetical protein	K4ICM8	Acidithiobacillus_phage	3.0e-80	72.8
WP_071507376.1\|209476_209953_+	hypothetical protein	K4I3X7	Acidithiobacillus_phage	7.4e-52	64.4
WP_071507375.1\|209952_210690_+	hypothetical protein	K4HZA0	Acidithiobacillus_phage	5.4e-110	76.6
WP_011003118.1\|210686_210947_+	DNA-binding protein	K4I1D6	Acidithiobacillus_phage	5.5e-17	62.0
WP_119889765.1\|210943_213232_+	hypothetical protein	K4HZY1	Acidithiobacillus_phage	1.2e-285	63.5
WP_016725339.1\|213362_213827_+	hypothetical protein	K4ICN3	Acidithiobacillus_phage	1.0e-53	67.6
WP_011003115.1\|213828_214038_+	hypothetical protein	NA	NA	NA	NA
WP_016725340.1\|214030_214414_+	hypothetical protein	NA	NA	NA	NA
WP_016725341.1\|214468_214735_+	type II toxin-antitoxin system ParD family antitoxin	NA	NA	NA	NA
WP_011003112.1\|214734_215034_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_071624071.1\|215984_218657_+	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	6.1e-87	32.0

DBSCAN-SWA_2

222935 : 268795

uncultured_Caudovirales_phage(27.27%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_086005097.1\|222935_224085_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	5.9e-95	60.7
WP_071624171.1\|224178_225525_+	hypothetical protein	NA	NA	NA	NA
WP_016724179.1\|225978_226317_+	DUF1484 domain-containing protein	NA	NA	NA	NA
WP_038962522.1\|226374_226665_-	hypothetical protein	NA	NA	NA	NA
WP_016726935.1\|226793_227315_-	DUF3489 domain-containing protein	A0A2H4JE21	uncultured_Caudovirales_phage	1.2e-23	61.9
WP_071624170.1\|227521_228487_+\|protease	YopT-type cysteine protease domain-containing protein	NA	NA	NA	NA
WP_016725019.1\|228715_228910_+	hypothetical protein	A0A2H4JCL4	uncultured_Caudovirales_phage	1.4e-17	68.6
WP_011003098.1\|228925_229162_+	hypothetical protein	A0A2H4JCL4	uncultured_Caudovirales_phage	1.6e-20	82.3
WP_043897660.1\|230748_232212_-	MFS transporter	NA	NA	NA	NA
WP_016726931.1\|232261_233068_-	oxidoreductase	NA	NA	NA	NA
WP_038938210.1\|233160_234621_-	TolC family protein	NA	NA	NA	NA
WP_020371869.1\|234708_235323_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_011003094.1\|235410_236526_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_020371868.1\|236522_239645_+	efflux RND transporter permease subunit	NA	NA	NA	NA
WP_157048852.1\|240300_240603_-	hypothetical protein	NA	NA	NA	NA
WP_071615479.1\|240841_241528_+	TolC family protein	NA	NA	NA	NA
WP_019717165.1\|241931_242669_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_071624190.1\|242917_243742_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_011003086.1\|243799_244336_+	hypothetical protein	A0A0M4UKC5	Ralstonia_phage	1.8e-46	50.3
WP_158594538.1\|244494_245127_-	hypothetical protein	NA	NA	NA	NA
WP_011003084.1\|245451_245676_+	hypothetical protein	NA	NA	NA	NA
WP_071624189.1\|245742_246033_+	hypothetical protein	K4I011	Acidithiobacillus_phage	5.3e-13	47.6
WP_011003082.1\|246029_246512_+	hypothetical protein	K4ICR8	Acidithiobacillus_phage	4.8e-59	71.6
WP_089190464.1\|246582_247699_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	8.9e-48	40.4
WP_038962648.1\|247769_248219_+	HNH endonuclease	A0A290FZR9	Caldibacillus_phage	2.8e-21	48.9
WP_119889901.1\|248215_248677_+	lysozyme	K4I410	Acidithiobacillus_phage	1.9e-65	79.6
WP_019719020.1\|248744_249041_+	hypothetical protein	NA	NA	NA	NA
WP_011003078.1\|249092_249425_-	DUF1484 domain-containing protein	NA	NA	NA	NA
WP_071624202.1\|258630_259020_+	hypothetical protein	NA	NA	NA	NA
WP_071624201.1\|259147_259393_+	hypothetical protein	NA	NA	NA	NA
WP_158594539.1\|259396_262939_+	DUF637 domain-containing protein	NA	NA	NA	NA
WP_081365364.1\|262935_263391_+	hypothetical protein	NA	NA	NA	NA
WP_119889766.1\|263433_263622_+	hypothetical protein	NA	NA	NA	NA
WP_071624187.1\|264268_265225_-\|transposase	IS5 family transposase	A0A1V0E8E1	Vibrio_phage	3.3e-59	43.4
WP_071624208.1\|267286_268795_+\|transposase	IS21 family transposase	NA	NA	NA	NA

DBSCAN-SWA_3

840320 : 888410

Lactobacillus_phage(16.67%)

coat,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011002605.1\|840320_840824_+\|coat	spore coat U domain-containing protein	NA	NA	NA	NA
WP_058907884.1\|840873_841377_+\|coat	spore coat U domain-containing protein	NA	NA	NA	NA
WP_049842205.1\|841495_842215_+	molecular chaperone	NA	NA	NA	NA
WP_058907885.1\|842264_844529_+	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_172833515.1\|844546_845035_+\|coat	spore coat U domain-containing protein	NA	NA	NA	NA
WP_011002600.1\|845104_845647_+	hypothetical protein	NA	NA	NA	NA
WP_016723690.1\|846252_847197_+	hydrogen peroxide-inducible genes activator	A0A2P0ZL89	Lactobacillus_phage	4.0e-09	23.9
WP_058907886.1\|847415_847664_+	hypothetical protein	NA	NA	NA	NA
WP_011002597.1\|847722_847965_+	hypothetical protein	NA	NA	NA	NA
WP_003271865.1\|848123_848624_+	DNA starvation/stationary phase protection protein	A0A2H4N7L5	Lake_Baikal_phage	2.1e-20	36.2
WP_011002596.1\|848697_849573_+	4-hydroxybenzoate octaprenyltransferase	NA	NA	NA	NA
WP_058907887.1\|849569_849848_-	hypothetical protein	NA	NA	NA	NA
WP_028853591.1\|849869_850694_-	pyrroline-5-carboxylate reductase	NA	NA	NA	NA
WP_011002593.1\|850728_851451_-	YggS family pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_011002592.1\|851575_852619_+	type IV pilus twitching motility protein PilT	NA	NA	NA	NA
WP_011002591.1\|852671_853811_+	PilT/PilU family type 4a pilus ATPase	NA	NA	NA	NA
WP_016723685.1\|854005_854446_+	type IV pilin protein	NA	NA	NA	NA
WP_016723684.1\|854449_854938_+	GspH/FimT family pseudopilin	NA	NA	NA	NA
WP_028860948.1\|854934_855525_+	type IV pilus modification protein PilV	NA	NA	NA	NA
WP_016723683.1\|855521_856550_+	PilW family protein	NA	NA	NA	NA
WP_011002586.1\|856553_857090_+	pilus assembly PilX N-terminal domain-containing protein	NA	NA	NA	NA
WP_071623704.1\|857121_860334_+	pilus assembly protein	NA	NA	NA	NA
WP_011002584.1\|860429_860927_+	glutathione peroxidase	Q6VZR0	Canarypox_virus	5.5e-26	40.2
WP_016723680.1\|860943_861642_-	YafY family transcriptional regulator	NA	NA	NA	NA
WP_016726000.1\|861684_862164_-	cupin domain-containing protein	NA	NA	NA	NA
WP_016723678.1\|862214_862610_-	VOC family protein	NA	NA	NA	NA
WP_028853586.1\|862767_863490_-	LrgB family protein	NA	NA	NA	NA
WP_058907889.1\|863486_863864_-	CidA/LrgA family protein	NA	NA	NA	NA
WP_058907890.1\|863915_865163_-	glycolate oxidase subunit GlcF	NA	NA	NA	NA
WP_058907891.1\|865172_866291_-	glycolate oxidase subunit GlcE	NA	NA	NA	NA
WP_058907892.1\|866301_867795_-	FAD-binding protein	NA	NA	NA	NA
WP_058907893.1\|867965_868856_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_011002574.1\|868866_870285_-	FAD-binding protein	NA	NA	NA	NA
WP_020832612.1\|870405_870963_+	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA
WP_011002572.1\|871036_871933_-	mechanosensitive ion channel family protein	NA	NA	NA	NA
WP_058907894.1\|872217_872553_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_011002570.1\|872676_873756_-	3-deoxy-7-phosphoheptulonate synthase AroG	A0A2I6UFP9	Klebsiella_phage	1.1e-76	45.0
WP_058907895.1\|874148_875609_-\|protease	metalloprotease TldD	NA	NA	NA	NA
WP_011002568.1\|875636_876506_-	carbon-nitrogen hydrolase family protein	M1H5W0	Paramecium_bursaria_Chlorella_virus	8.3e-09	25.3
WP_071623705.1\|876511_880792_-	TIGR02099 family protein	NA	NA	NA	NA
WP_071623706.1\|880971_883839_+	bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase	NA	NA	NA	NA
WP_011002565.1\|883835_884456_+	rhombosortase	NA	NA	NA	NA
WP_020832604.1\|884511_886563_-\|protease	MprA protease, GlyGly-CTERM protein-sorting domain-containing form	A0A1B0T6A2	Bacillus_phage	6.1e-10	34.7
WP_043897787.1\|886778_888410_-\|protease	MprA protease, GlyGly-CTERM protein-sorting domain-containing form	NA	NA	NA	NA

DBSCAN-SWA_4

903569 : 913708

Hokovirus(14.29%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_021155204.1\|903569_905531_+	molecular chaperone DnaK	A0A1V0SH73	Hokovirus	1.4e-149	50.8
WP_011002544.1\|905665_906808_+	molecular chaperone DnaJ	A0A0P0YMJ9	Yellowstone_lake_phycodnavirus	2.9e-22	32.7
WP_028860933.1\|906843_908724_+	bifunctional anthranilate synthase component I family protein/class IV aminotransferase	A0A0B5J984	Pandoravirus	4.6e-57	37.4
WP_058907902.1\|908679_909366_-	energy-coupling factor ABC transporter ATP-binding protein	F2Y2R6	Organic_Lake_phycodnavirus	8.8e-14	27.2
WP_011002541.1\|909373_910081_-	ABC transporter permease	NA	NA	NA	NA
WP_011002540.1\|910092_910917_-	3-methyl-2-oxobutanoate hydroxymethyltransferase	A0A0N7HVJ8	Ostreococcus_lucimarinus_virus	1.9e-34	31.3
WP_011002539.1\|910973_911618_-	deoxynucleoside kinase	M1IA15	Paramecium_bursaria_Chlorella_virus	1.7e-06	27.8
WP_003271964.1\|911651_912161_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
WP_020832586.1\|912160_913708_-	polynucleotide adenylyltransferase PcnB	H7BUW3	unidentified_phage	3.6e-23	33.6

DBSCAN-SWA_5

2001928 : 2014277

Ralstonia_phage(76.92%)

coat,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010889950.1\|2001928_2002360_-	DUF29 domain-containing protein	A0JC30	Ralstonia_phage	7.1e-78	100.0
WP_010889951.1\|2002401_2003028_-	hypothetical protein	A0JC29	Ralstonia_phage	6.2e-107	100.0
WP_071653928.1\|2003950_2004775_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_015984160.1\|2005083_2005359_-	DUF2523 domain-containing protein	A0JC27	Ralstonia_phage	4.3e-36	100.0
WP_071623619.1\|2005355_2006591_-	hypothetical protein	S6BAK4	Ralstonia_phage	2.4e-211	99.8
WP_010889942.1\|2006670_2007006_-	hypothetical protein	A0JC24	Ralstonia_phage	1.6e-56	100.0
WP_015984157.1\|2007005_2007275_-\|coat	major coat protein	A0JC23	Ralstonia_phage	4.9e-37	100.0
WP_010889944.1\|2007274_2007586_-	hypothetical protein	A0JC22	Ralstonia_phage	8.2e-52	100.0
WP_015984156.1\|2007590_2008718_-	replication initiation factor domain-containing protein	A0JC21	Ralstonia_phage	1.3e-219	100.0
WP_015984155.1\|2008717_2008924_-	hypothetical protein	A0JC20	Ralstonia_phage	2.8e-32	100.0
WP_089190813.1\|2009040_2009433_+	helix-turn-helix transcriptional regulator	S6B268	Ralstonia_phage	4.8e-65	100.0
WP_038938487.1\|2010131_2011646_+	deoxyribodipyrimidine photo-lyase	A0A2H4UV63	Bodo_saltans_virus	4.6e-47	27.8
WP_043885799.1\|2011893_2012148_-	hypothetical protein	NA	NA	NA	NA
WP_058908721.1\|2012254_2013877_-	chaperonin GroEL	A0A240F779	uncultured_virus	5.2e-174	60.8
WP_016727460.1\|2013959_2014277_-	co-chaperone GroES	A0A221S322	uncultured_virus	1.8e-17	47.9

DBSCAN-SWA_6

2639426 : 2647662

Planktothrix_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011000872.1\|2639426_2640479_-	methionine ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.6e-33	39.4
WP_011000871.1\|2640635_2641559_-	histone deacetylase family protein	A0A2K9KZC4	Tupanvirus	9.3e-43	35.9
WP_058907684.1\|2641676_2642789_+	lytic murein transglycosylase B	NA	NA	NA	NA
WP_011000869.1\|2642869_2643772_-	cysteine synthase CysM	A0A1X9I5K7	Streptococcus_phage	8.2e-52	40.8
WP_011000868.1\|2643875_2644193_-	ComEA family DNA-binding protein	NA	NA	NA	NA
WP_011000867.1\|2644322_2645318_-	ADP-glyceromanno-heptose 6-epimerase	R9S880	Prochlorococcus_phage	4.1e-28	32.3
WP_049842162.1\|2645314_2646262_-	D-glycero-beta-D-manno-heptose-7-phosphate kinase	A0A2H4N7X4	Lake_Baikal_phage	9.0e-17	27.6
WP_016723343.1\|2646288_2647662_-	UDP-glucose/GDP-mannose dehydrogenase family protein	A0A127AXI2	Bacillus_phage	1.9e-76	38.9

DBSCAN-SWA_7

2690543 : 2742328

Acidithiobacillus_phage(37.93%)

tail,capsid,terminase,portal,head,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_058907694.1\|2690543_2691005_-	lysozyme	K4I410	Acidithiobacillus_phage	4.8e-64	80.3
WP_028860336.1\|2691001_2691478_-	hypothetical protein	K4ICR8	Acidithiobacillus_phage	1.4e-71	84.2
WP_016724633.1\|2691474_2691765_-	membrane protein	K4I011	Acidithiobacillus_phage	2.4e-13	48.8
WP_058907695.1\|2691832_2692057_-	hypothetical protein	NA	NA	NA	NA
WP_071508023.1\|2692066_2693902_-	hypothetical protein	A0A0M4UKC5	Ralstonia_phage	1.1e-103	45.1
WP_071508022.1\|2693906_2694305_-	hypothetical protein	NA	NA	NA	NA
WP_016727799.1\|2694301_2694784_-	hypothetical protein	A0A0M4TU90	Ralstonia_phage	1.1e-13	44.0
WP_071653957.1\|2694787_2695954_-	hypothetical protein	A0A0M5TJJ3	Ralstonia_phage	7.9e-47	33.3
WP_071895561.1\|2695965_2699556_-	hypothetical protein	A0A0M4U447	Ralstonia_phage	0.0e+00	53.5
WP_016727790.1\|2699585_2700158_+	hypothetical protein	NA	NA	NA	NA
WP_016727789.1\|2700144_2700540_-	hypothetical protein	A0A0M4UTA7	Ralstonia_phage	1.6e-31	53.0
WP_119889844.1\|2700545_2704649_-\|tail	phage tail tape measure protein	A0A0P0ZCJ4	Stx2-converting_phage	1.4e-26	28.8
WP_165858489.1\|2704832_2705990_+	hypothetical protein	NA	NA	NA	NA
WP_071654080.1\|2706095_2707184_-	DNA cytosine methyltransferase	Q6J1P4	Burkholderia_virus	1.8e-98	54.5
WP_016727755.1\|2707808_2708096_+	H-NS histone family protein	NA	NA	NA	NA
WP_173940953.1\|2708684_2711003_+	hypothetical protein	NA	NA	NA	NA
WP_071507988.1\|2711385_2712030_-	hypothetical protein	NA	NA	NA	NA
WP_071507989.1\|2712004_2712226_-	hypothetical protein	NA	NA	NA	NA
WP_071507990.1\|2712222_2712612_-	hypothetical protein	NA	NA	NA	NA
WP_071653954.1\|2712620_2713394_-	hypothetical protein	A0A2D2W2E0	Stenotrophomonas_phage	3.1e-47	43.6
WP_071508048.1\|2713516_2713963_-	hypothetical protein	NA	NA	NA	NA
WP_020833003.1\|2713968_2714271_-	hypothetical protein	NA	NA	NA	NA
WP_071653953.1\|2714273_2715278_-\|capsid	major capsid protein	A0A1B2LRS0	Wolbachia_phage	1.9e-110	67.5
WP_071653952.1\|2715284_2715662_-\|head	head decoration protein	A0A1B2LRT0	Wolbachia_phage	6.7e-24	48.0
WP_071653951.1\|2715671_2716931_-	S49 family peptidase	K4HZZ6	Acidithiobacillus_phage	4.6e-61	43.4
WP_016725355.1\|2716940_2718467_-\|portal	phage portal protein	A0A1B2LRR5	Wolbachia_phage	3.4e-151	57.7
WP_016725356.1\|2718466_2718688_-	hypothetical protein	A0A2H4JCJ9	uncultured_Caudovirales_phage	1.3e-11	57.5
WP_016727772.1\|2718688_2719081_-	hypothetical protein	NA	NA	NA	NA
WP_071653949.1\|2719091_2719601_-	hypothetical protein	A0A0F6WCR7	Sinorhizobium_phage	4.8e-25	44.4
WP_172833506.1\|2719644_2721627_-\|terminase	phage terminase large subunit family protein	A0A2H4JIC6	uncultured_Caudovirales_phage	0.0e+00	86.0
WP_038962858.1\|2721626_2722163_-	hypothetical protein	A0A2H4JCL4	uncultured_Caudovirales_phage	4.2e-72	79.8
WP_038938655.1\|2722182_2722521_+	hypothetical protein	NA	NA	NA	NA
WP_071624100.1\|2722627_2723134_+	DUF3489 domain-containing protein	A0A2H4JE21	uncultured_Caudovirales_phage	4.0e-24	72.3
WP_016727890.1\|2723263_2723770_+	DUF3489 domain-containing protein	K4HZZ2	Acidithiobacillus_phage	2.9e-14	32.9
WP_038938808.1\|2723897_2724248_+	hypothetical protein	NA	NA	NA	NA
WP_162904291.1\|2724345_2724510_+	hypothetical protein	K4HZY7	Acidithiobacillus_phage	1.1e-07	56.1
WP_016725011.1\|2724591_2724888_+	hypothetical protein	NA	NA	NA	NA
WP_016725010.1\|2724884_2725265_+	DUF86 domain-containing protein	NA	NA	NA	NA
WP_071653948.1\|2725247_2726522_-	site-specific DNA-methyltransferase	A0A2H4JGF1	uncultured_Caudovirales_phage	6.3e-199	81.1
WP_071508043.1\|2726518_2727922_-	site-specific DNA-methyltransferase	K4I3Y2	Acidithiobacillus_phage	8.3e-160	60.5
WP_119889845.1\|2728148_2729387_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	4.7e-34	31.7
WP_071895574.1\|2730230_2730638_-	hypothetical protein	NA	NA	NA	NA
WP_016725004.1\|2730627_2730837_-	hypothetical protein	NA	NA	NA	NA
WP_071895575.1\|2731046_2733353_-	hypothetical protein	K4HZY1	Acidithiobacillus_phage	1.2e-269	59.7
WP_071895576.1\|2733336_2733726_-	hypothetical protein	NA	NA	NA	NA
WP_071895577.1\|2733731_2734199_-	hypothetical protein	K4I3X7	Acidithiobacillus_phage	1.6e-38	53.9
WP_071895578.1\|2734208_2734841_-	hypothetical protein	K4ICM8	Acidithiobacillus_phage	2.7e-62	61.4
WP_021156151.1\|2734858_2735731_-	ATP-binding protein	K4HZX9	Acidithiobacillus_phage	2.4e-101	65.7
WP_021156150.1\|2735727_2736225_-	hypothetical protein	NA	NA	NA	NA
WP_071895579.1\|2736221_2736506_-	hypothetical protein	NA	NA	NA	NA
WP_016724993.1\|2736927_2737533_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_119889847.1\|2738708_2739710_+	NADP-dependent oxidoreductase	NA	NA	NA	NA
WP_058908754.1\|2740138_2741113_-	hypothetical protein	NA	NA	NA	NA
WP_103025505.1\|2741863_2742328_+\|transposase	transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP052091

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP052091_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP052091_1

446476-446633

Orphan

Consensus_repeat	Method
GCCAAGGCCGGCAGCAAGTTCGATCCGTACACGGATGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP052091_1

>merge|NZ_CP052091|1|446476-446633|CRISPRCasFinder
GCCAAGGTGAACGGCAAGTTCGACACCTACACGGAAGGCGCCAAGGCCGGCAGCAAGTTCGATCCGTACACGGATGGTGCGCTTGCCCGCGTCGGCAGGTTCGATACCTATACCGAAGGTGCCAAGGCCGGCAGCAAGTACGATCCGTACACGGATGG

>NZ_CP052091|1|1|446476-446633|CRISPRCasFinder
GCCAAGGTGAACGGCAAGTTCGACACCTACACGGAAGG	CGCCAAGGCCGGCAGCAAGTTCGATCCGTACACGGATGGTGCGCTTGCCCGCGTCGGCAGGTTCGATACCTATACCGAAGGT
GCCAAGGCCGGCAGCAAGTACGATCCGTACACGGATGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP052091.1\|WP_071623659.1\|437282_438839_+\|flagellar-hook-length-control-protein-FliK	unknown	unknown	gnl\|CDD\|225686
NZ_CP052091.1\|WP_045579185.1\|446995_447793_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|366760
NZ_CP052091.1\|WP_011003706.1\|436794_437262_+\|flagellar-export-protein-FliJ	unknown	unknown	gnl\|CDD\|225437
NZ_CP052091.1\|WP_081365348.1\|459502_460165_-\|phosphatase-PAP2-family-protein	unknown	unknown	gnl\|CDD\|239481
NZ_CP052091.1\|WP_011003713.1\|445270_445438_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP052091.1\|WP_071623660.1\|445436_446024_+\|BON-domain-containing-protein	unknown	unknown	gnl\|CDD\|335963
NZ_CP052091.1\|WP_011003709.1\|440334_440886_+\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|224168
NZ_CP052091.1\|WP_020829802.1\|439183_440164_-\|VTT-domain-containing-protein	unknown	unknown	gnl\|CDD\|223659
NZ_CP052091.1\|WP_028861446.1\|443524_445063_-\|diguanylate-cyclase	unknown	unknown	gnl\|CDD\|143635
NZ_CP052091.1\|WP_019719139.1\|435250_436696_+\|flagellar-protein-export-ATPase-FliI	unknown	unknown	gnl\|CDD\|274607
NZ_CP052091.1\|WP_071011871.1\|440933_442400_-\|sensor-domain-containing-diguanylate-cyclase	unknown	unknown	gnl\|CDD\|143635
NZ_CP052091.1\|WP_081365349.1\|456081_459447_+\|thioester-reductase-domain-containing-protein	unknown	unknown	gnl\|CDD\|341254
NZ_CP052091.1\|WP_064478310.1\|443194_443494_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP052091.1\|WP_087451503.1\|453278_454084_+\|IS5-family-transposase	unknown	unknown	gnl\|CDD\|379129
NZ_CP052091.1\|WP_071624020.1\|455191_455728_-\|PAAR-domain-containing-protein	unknown	unknown	gnl\|CDD\|269829
NZ_CP052091.1\|WP_016724297.1\|454136_454502_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP052091.1\|WP_071624208.1\|447782_449291_-\|IS21-family-transposase	unknown	unknown	gnl\|CDD\|226950
NZ_CP052091.1\|WP_016724296.1\|454501_455191_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366166
NZ_CP052091.1\|WP_020831502.1\|451804_453133_-\|IS4-family-transposase	unknown	unknown	gnl\|CDD\|379017
NZ_CP052091.1\|WP_071624021.1\|460247_461261_-\|peptidase	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP052091.1\|WP_071623659.1\|437282_438839_+\|flagellar-hook-length-control-protein-FliK	gnl\|CDD\|225686	COG3144, FliK, Flagellar hook-length control protein [Cell motility and secretion].	6.8164e-50
NZ_CP052091.1\|WP_045579185.1\|446995_447793_-\|ATP-binding-protein	gnl\|CDD\|366760	pfam01695, IstB_IS21, IstB-like ATP binding protein. This protein contains an ATP/GTP binding P-loop motif. It is found associated with IS21 family insertion sequences. The function of this protein is unknown, but it may perform a transposase function.	4.64042e-66
NZ_CP052091.1\|WP_011003706.1\|436794_437262_+\|flagellar-export-protein-FliJ	gnl\|CDD\|225437	COG2882, FliJ, Flagellar biosynthesis chaperone [Cell motility and secretion / Intracellular trafficking and secretion / Posttranslational modification, protein turnover, chaperones].	4.60762e-36
NZ_CP052091.1\|WP_081365348.1\|459502_460165_-\|phosphatase-PAP2-family-protein	gnl\|CDD\|239481	cd03386, PAP2_Aur1_like, PAP2_like proteins, Aur1_like subfamily. Yeast Aur1p or Ipc1p is necessary for the addition of inositol phosphate to ceramide, an essential step in yeast sphingolipid synthesis, and is the target of several antifungal compounds such as aureobasidin.	6.80684e-13
NZ_CP052091.1\|WP_071623660.1\|445436_446024_+\|BON-domain-containing-protein	gnl\|CDD\|335963	pfam04972, BON, BON domain. This domain is found in a family of osmotic shock protection proteins. It is also found in some Secretins and a group of potential haemolysins. Its likely function is attachment to phospholipid membranes.	1.66825e-07
NZ_CP052091.1\|WP_011003709.1\|440334_440886_+\|N-acetyltransferase	gnl\|CDD\|224168	COG1247, COG1247, Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane].	2.05929e-69
NZ_CP052091.1\|WP_020829802.1\|439183_440164_-\|VTT-domain-containing-protein	gnl\|CDD\|223659	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown].	6.36436e-46
NZ_CP052091.1\|WP_028861446.1\|443524_445063_-\|diguanylate-cyclase	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	1.72289e-57
NZ_CP052091.1\|WP_019719139.1\|435250_436696_+\|flagellar-protein-export-ATPase-FliI	gnl\|CDD\|274607	TIGR03496, FliI_clade1, flagellar protein export ATPase FliI. Members of this protein family are the FliI protein of bacterial flagellum systems. This protein acts to drive protein export for flagellar biosynthesis. The most closely related family is the YscN family of bacterial type III secretion systems. This model represents one (of three) segment of the FliI family tree. These have been modeled separately in order to exclude the type III secretion ATPases more effectively. [Cellular processes, Chemotaxis and motility].	0
NZ_CP052091.1\|WP_071011871.1\|440933_442400_-\|sensor-domain-containing-diguanylate-cyclase	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	5.77873e-57
NZ_CP052091.1\|WP_081365349.1\|456081_459447_+\|thioester-reductase-domain-containing-protein	gnl\|CDD\|341254	cd05931, FAAL, Fatty acyl-AMP ligase (FAAL). FAAL belongs to the class I adenylate forming enzyme family and is homologous to fatty acyl-coenzyme A (CoA) ligases (FACLs). However, FAALs produce only the acyl adenylate and are unable to perform the thioester-forming reaction, while FACLs perform a two-step catalytic reaction; AMP ligation followed by CoA ligation using ATP and CoA as cofactors. FAALs have insertion motifs between the N-terminal and C-terminal subdomains that distinguish them from the FACLs. This insertion motif precludes the binding of CoA, thus preventing CoA ligation. It has been suggested that the acyl adenylates serve as substrates for multifunctional polyketide synthases to permit synthesis of complex lipids such as phthiocerol dimycocerosate, sulfolipids, mycolic acids, and mycobactin.	1.23874e-147
NZ_CP052091.1\|WP_087451503.1\|453278_454084_+\|IS5-family-transposase	gnl\|CDD\|379129	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096).	7.81661e-27
NZ_CP052091.1\|WP_016724296.1\|454501_455191_-\|hypothetical-protein	gnl\|CDD\|366166	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes.	4.37195e-05
NZ_CP052091.1\|WP_071624208.1\|447782_449291_-\|IS21-family-transposase	gnl\|CDD\|226950	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	6.53998e-19
NZ_CP052091.1\|WP_071624020.1\|455191_455728_-\|PAAR-domain-containing-protein	gnl\|CDD\|269829	cd14744, PAAR_CT_2, proline-alanine-alanine-arginine (PAAR) domain with uncharacterized C-terminal extension. This domain is found in the PAAR (proline-alanine-alanine-arginine) repeat family of mostly beta- and gamma-proteobacteria, and forms a sharp conical extension on the VgrG spike, a trimeric protein complex of the bacterial type VI secretion system (T6SS). Most members contain C-terminal domain extensions corresponding to several uncharacterized domains such as S-type pyocin, DUF2235, DUF2345 and cytotoxic proteins. However, these terminal domains are exposed to solution, and do not distort the binding site of VgrG. The pointed tip of the PAAR domain is stabilized by a zinc atom positioned close to the cone's vertex and is likely to be important for its integrity during penetration of the target cell envelope. VgrG proteins are orthologous to the central baseplate spikes of bacteriophages with contractile tails, and genes encoding proteins with PAAR motifs have been frequently found immediately downstream from vgrG-like genes.	2.02661e-25
NZ_CP052091.1\|WP_020831502.1\|451804_453133_-\|IS4-family-transposase	gnl\|CDD\|379017	pfam13006, Nterm_IS4, Insertion element 4 transposase N-terminal. This family represents the N-terminal region of proteins carrying the transposase enzyme, DDE_Tnp_1 (that was Transposase_11), pfam01609, at the C-terminus. The full-length members are Insertion Element 4, IS4. Within the collection of E.coli strains, ECOR, the number of IS4 elements varies from zero to 14, with an average of 5 copies/strain.	3.74521e-33

>NZ_CP052091.1|WP_071623660.1|445436_446024_+|BON-domain-containing-protein
MFVEAKNAQGAVAVGKGRPGLSQSLAWPARRIGVRGLGLAICMAMPVAFAQMPPASGPSGVPGRDLRNGVSAPFVQISQDVPDCPVPRGPLPAGAQARGQPHDRIERGNNCCHPGGHATDPEIAGAAQQRLRNDPRLRDSTLWIAVQDHVIALQGCAASARQIDYVAEVLRQLPDVQHVAVDVAVRRPGAAAMPR
>NZ_CP052091.1|WP_011003713.1|445270_445438_-|hypothetical-protein
MKRLLSGLSLLVVVLLSGCGVAAAPCRVASAGLKMVPLVGHVAAAPTDACADIID
>NZ_CP052091.1|WP_028861446.1|443524_445063_-|diguanylate-cyclase
MSIFSINTPARLIGTALLFSLTVSAGAALSLYEMRLDALKCAKDAGANIALIIERDVARNLELYSLSVETVLERLADPEVHQVSNHIRRLVLFDGIAQARDLGSILVTDARGQVVLDSKAEPARNIHIGDRDYFQQQARIDSTAVLISKPLEARTGYGASITVSRRLNDAQGKFAGVVSGALRISYFNRLFSGMTLGPKGAIALFYADGTLIARRPAPPAAGAAEKRSPEALKRVIDTTDGLYLGKSVRDGIERLYTYRRIGHYPLYVAVGAATEDIYANWTSRAWAIGLLVAVFNLVTMALAYQFAKQLEKRLAAGRRHAELAITDALTGLPNRRALDAFLDKEWKRALRERWPVSVLMIDVDAFKPYNDHYGHLGGDTALKAVARCIQAHASRSGDLAARYGGEEFCIVLPHTDLEGAIAVAEHIRQAVLALHIPHAQGPAGILSVSIGAATDTPALSGDRAETLTQAADTQLYRAKTQGRNRTMPTGAEAENAPKTTPGHPAVLAEHGS
>NZ_CP052091.1|WP_064478310.1|443194_443494_+|hypothetical-protein
MPTWSIERYRGCSIHVLAVPGGGGFQYAYTGFVCSPKSDAMAYPDLQRFHHVSAAFDSAGEAISAGMEAGRAIIEGWLGAHPVPVGRRGERRGADALRV
>NZ_CP052091.1|WP_071011871.1|440933_442400_-|sensor-domain-containing-diguanylate-cyclase
MLKLLINKPKRLIGLALLLSLTVSAAAMLSLHEMRVDAFERAKDAGANIALVIEHDITRNLEFYSLSLQNVADRLADPEVRRLPDHVQRMVLFDGRIQAQDLGSMLVTDREGRVILDSKVEPARALDFGDRDYFLQQAKNDNLGIYVSKPFEARTGLGLAIALSLRLNDADGRFSGVVSGGLRVRYFDRLFSGVTLGKNGAIALLYADGTLATRRPALTSATAAAKRSEHLALFANTAGGTYLDASVRDGVERLYTYRRIGNYPLFVAVGTATEDIYANWKARAWWIGMLVVLFNVVTLAMAYLFAQHLERRIEEQRRHAELAATDALTGLANRRALDERLDAEWRRAARERQPLSVLMIDVDHFKAYNDHYGHPDGDAALQAVARCIQANLRRPGDLAARYGGEEFCVVLPGSDLDSANVVAETIRRAILVLNIPHARSASTALTVSIGAASGTPASSGEPRAATLTKAADAQLYRAKTSGRNRTMP
>NZ_CP052091.1|WP_011003709.1|440334_440886_+|N-acetyltransferase
MSSATPAAVSPPIAGASDAVVVRPARLADLPAIAAIYAHHVRTGTASFEIDPPDLAEMTRRFQTLQDTGMPYLVAQTGRKLLGFAYAGPHRARPAYRHTVEDSIYLDAAARGRGVGTLLLEALVRECVARGFRQIVAVVGGGQENLGSMRLHARCGFREVGVLAGVGYKFDRWLDVVLMQRTL
>NZ_CP052091.1|WP_020829802.1|439183_440164_-|VTT-domain-containing-protein
MHDLFPLIAEYGVFAVFANVFLTQAGAPLPAVPTLLVAGALTANGALPWPELLPAALTGALLGDGLWYLAGQRYGRHVMALLCRLSLSPDSCVRRTRTQFERWGAPMLLIAKFVPGLSTVSSALLGTMRTPFSTFALYDLLGSALWAAGWMLLGRGAHGSIDPLLTHLDQLGGHAVVLVALLVAVYVAARWLQRWRFRKMLEMVRISPDELHALIESGEAPVIIDVRAGSSRMSQPHRIPGAMLYDMSAKDGPIEIEGPDREIVIYCACPNEASAVMLARTLMGRGFRRVRPLHGGIDAWMDRGYGVEHVVSVTPATLAAAEAAGG
>NZ_CP052091.1|WP_071623659.1|437282_438839_+|flagellar-hook-length-control-protein-FliK
MGLSATPNTAATDLGAMLSSAGTAADKSQAASSGADTFGNLLSDRLNQEAARRQTDAQSAGSRAAARRADATKKDAAKASAAGNDQDARQADRHAEAAPATAAASATQDAQASKAASSDDTQDKTAAAQAGVDPAAQLAAQIEAARQAMQQAAAPVAQPGTQVATADDAAAQLAAGKAGAATTDAAALAALSAANAAAGKLTDPAATVAQPQAAQADALKAAAGKEAQAAKPTPLPDASTVAQALARTRGTTDNTPPAVRHLGSASSSAQGAGSERGSAAHRTEAGQGTQAQAATAATAETGRNADTSGNPNTQADAQGAGTKFDGVLTRANGDAVATAPTFTVGGAGTAGSAASAAVTPAQTHTLPTFGDAAWPHTMASQLAYMQVHRQSSAELQLSPAELGGLHVKLEIDNGAVNASFVCQHQAVAELVQDAMPRLRDAMQQGGMELAQTSVSTGDFSQQGASQGSSAQGNGSGGGNGGGSGGNRFAGMQGQAGTGTVAVSAPRVSSHAGAIDTFA
>NZ_CP052091.1|WP_011003706.1|436794_437262_+|flagellar-export-protein-FliJ
MTTTHKPFRLETVLELAKKDTEKATQEVGRLMNTRELAAQKLAMLSDYRNNYRQQMQVNAEGGIDAARLHNYAAFIDRLGSAVDHQRGTISALEAQLQRSRDNWLEKQRREQSFDILRQRHVEEQRQDQERRAQRENDEHAAKLIRMRAAQAGSN
>NZ_CP052091.1|WP_019719139.1|435250_436696_+|flagellar-protein-export-ATPase-FliI
MLPDPAQTGARAPASQANPNVNLWQAHLHQTAQRARLARPVVTCGKLTRVAGLVMEAVGLKLPVGSACRVELPYGRHVLAEVVGFAEERAFLMPQTDLVGVVPGARVFPLEPQHLPLDTADPTIAHSKFLPVGPRLLGRVVDANGEPLDGKGPLGASEELAWGSLAPAPLNPLKRKPIEHVLDVGVRAINGLLTVGQGQRLGLFAGSGVGKSVLLGMMARYTQADVVVVGLIGERGREVKEFIDEILGDEGLARSAVVAAPADNSPLMRLQGAAYAHTIAEYFRDRGCNVLLIVDSLTRYAMAQREIALAIGEPPATKGYPPSAFAKLPALVERAGNGMVDAAGRGGSITAFYTVLAEGDDQQDPIADAARAILDGHFVLSRKLAEQGHYPAIDIEQSISRVMSAIVPREQLDAARRFKQLYARYQRNRDLIAVGAYARGSDPVTDQAIARYPSMEGFLQQGMFENESRERTLEKMNAVLS
>NZ_CP052091.1|WP_045579185.1|446995_447793_-|ATP-binding-protein
MSNEVIARLKELKLHGMASSWAELYAQSRHTEFDPERFMQQLLLAEGAEREVRSIGYQMAAARFPAHRDLKGFDFAQARADEDLIRELYQMKFLDSAHNVVFIGGPGTGKTHLATAIGIEAVQRHGKRVRYFSTIELANALELEKAAGKQGQLAHRLTHVDLVILDEMGYLPFSQTAGALLFHLLSKLYERTSVAITTNLSFGEWASVFGDAKMTTALLDRLTHHCHIVETGNESWRFKESSTKVRATRKKTVREADNAELSTTR
>NZ_CP052091.1|WP_071624208.1|447782_449291_-|IS21-family-transposase
MGMLAKIRRMYFREKVPLREIARRTGLSRNTVRTWLKQPEAAEPKYPKRVSPSVVDEWAGQLEEWLRTDSHRPKRDRRTARFMFEAIRAQGFSGSYTRVSEFARRWREQQAQAPRRQAYVPLAFELGEAFQFDWSCEYVFVGGLRRRLEVAHVKLNASRAFWLVAYPTQSHEMLFDAHAKAFAAFGGVPRRGIYDNMKTAVDKVGRGKARTVNARFEAMCSHYLFEPEFCNRAAGWEKGIVEKNVQDRRRQIWHEAAQQRWASLETLNDWVSQRCRQAWQMRHPQWPELTVEDVLQDERTRLMPNPRPFDGYVEQFLRVSSTGLIHFQRNRYSVPTEFVNQLVSVRSYPAWLSVVADDREIARHARSFERHMTFYDWQHYITLVERKPGALRNGAPFATMPQPLQDLQRHLLKHPGGDRVMTEVLSAVREHGLDAVLLAAQTALDSGRPSGDHVLNVLSRLKAPADRKVMAVTALNLNEEPVADVGRYERLRATEPEHRHVQ
>NZ_CP052091.1|WP_020831502.1|451804_453133_-|IS4-family-transposase
MLASHLTYLLEAQQPADLSRLAEHLPYEWIERAVTATGTASIRRRRLPAEQVVWLVIALAMYRHWSISEVVDSLDLALPNESAAFVSKSAITQARERIGQAPLAWLFKRTAQAWTLQDGARHAIKGLSLWAIDGTTLRTADSPANREHFGAQGYASGKVASYPQVRAVTLTAIPTHLVADIRFGRYDTNEMVYAKDLLPEIPDDSLTVFDRGFVSAEILCSLTMNGRNRHFLIPAKSNTRWEVIAGSAEDAMVRMRTSPQARKKCPQLPEYWDARAVRTIDARGRERVLLTSLTDRRRFKPSDLAACYSRRWQIETSYQELKQSMLGMELTLRSRTVERVYQEIWGALIAYNLIRREIACAAQEAKLAPADISFVRALHTIQHEMMWAALTPAYAKLPDCLKRLRERLKSLPNEKRPGRACNRVVKSRPSRYSVRYIKRDLN
>NZ_CP052091.1|WP_087451503.1|453278_454084_+|IS5-family-transposase
MSRRRISKELWAVLESLIPEFVPSAKGGRRRSVDDRAALNGILFVLQTGIPWEDLPQELGFGSGMTCWRRLRDWQAAGVWDKLHVAMLGRLREHDQIDWSRASIDGASVSKPPGGQETGPNPTDRGKLGSKRHLVVDAQGIPLAVTVTSANRHDSIAFESTLDTIPAVRGLDGRPRKRPDKLHADKGYDCRRCRRYLKRRGITARIARIGVEGKQRLGRHRWVVERTHAWFAGFGKLRIRFERRLDIHTALLSLAAAIICSRFVDDLC
>NZ_CP052091.1|WP_016724297.1|454136_454502_-|hypothetical-protein
MQTRLIRVMDVLTALLIVIGVAFLAHVTLFATITLDEVRTGRLVVVGAVAVTSGALLVLLELFVALFVLFRRPGARLRTLASMVAGIAAFVGCYALADSWIVHKLPPRHASVPVVVGVFPA
>NZ_CP052091.1|WP_016724296.1|454501_455191_-|hypothetical-protein
MPEVVYSGTYRLTPTADREAVKISLLRPRGTLYWGGAGLDGGYLRPQLEAFQTAGLRHCFVGLTNTGTADYPGLTGTFIDAVRSGLSIRFQDDGEWTISSGMSPEAGQFNLIGYSYGSLLAAQTAWSYARNGHPVDHLVLVGSPIDADFLANLKKHRLIRRVVVIDLRQYGDPIYAGMSETELLAGAPQLAKQFAAGKGEGHFYYAHVVKDSPRRWASLAQQIVAEGLK
>NZ_CP052091.1|WP_071624020.1|455191_455728_-|PAAR-domain-containing-protein
MAVVLRACAVVGDRTTTGGTILTGGAGQFMVISGKPAALWGDIASCPKCKSTGRIVGEAFPIQTVNGQPVARTGDLVLCQCPTRPKVLATGIANMVDDEFGGTGTVGEVRHLHDDREMFDRHFQLLDDASQQPLACRRYRLSWPGGSVEGVTNASGYTQRVQLLNPEEVSLEILPEGD
>NZ_CP052091.1|WP_081365349.1|456081_459447_+|thioester-reductase-domain-containing-protein
MFPGLAAHGPSLAAALQSEPRLPTLIAVPLRSLPMDSVLDCLEHWARLQPENVLFEFRDIAGAAVARHTYGSMLAAVDGLAAQLLEHGRFRHGDRVLLAHGPGLGTIVSLLGCARAGLIAVPVALPARADDAAMRRLRAIAANCSAVAVLSEGVQLHRLRDLLAACPETAGLAVQDSAAGSPDGAAGRSGVLRRAVGAASQPVLFLQYTSGSTGRPRGVVVSHRNVIANAGATVEGSPVGVSWLPAHHDMGLIGYTLFPLVSGGASYGMAPADFLHTPAAWLRLISEVRATHTSAPDFGYDYCLRPGKIDDGEIAGIDLGCLRAMMSGGERVRPATIRRFLERFARYGLRREACVASYGLAEATLNVAHEGRGSLCFSREALRGHRAVIAAPGEASVEIASCGRPAPGVVVSIAPAKGAVVDAAGAPAANGQAHAAVAMALEDPSGARVGEICVQGESVTVGYWNDAAPAGGALRTGDLGFLWQGELYVCGRQKELMIVAGANFYPEDMEEAVHASGAAVRPRGVCAFQDAQGQVILLAEPRRVDALPDPAELAQAARRAAGLMPDRVELVAPRSIALTTSGKLARAETRAAWAAGALRVLASHRCGAAPGLVPEGRQYASWRQGLRDVLGRYGAAGPVNAALPLSALGIDSLGLASIQVELEALLRQHGSGAVAEALDAPLLQQVSLNGLLAALAPLDRGRAEGAPQALASIEQLKAAFDSAVGSRMQADLQLDTQPLPQARASLPAEPGRAGTAILLTGATGFFGPFLLHALLRQTARDVIVLVRARDPEHAMERIDDALRRAYLPSPVPRTRVRAVCGDLALPRFGLADEAWDRLAAETAEVFHNGACVNYVMTYDAMRPANVEGTRSVLRLARHGSARRTVHLVSSTFIFGWSARGVLLETDCNAAMQALDFGYAQTKWVAEQMAMAARADGLDVRIYRPSLISVSTRGAGDTDDVALRMLAFMIRHGVAVDTPNQLSIVAADVIAHNMVGISRNAASASALHFTADRYYSMTELTRVIERDYGATFRYYDIPRFIDELNRRCSDRDPVFPLLDFFNRSADKIAAMQLKRYSSEHYQQARAALADPMMDPSLAQTAAYLMRYLRERGWVEPAPALPH
>NZ_CP052091.1|WP_081365348.1|459502_460165_-|phosphatase-PAP2-family-protein
MLGLPPKQGHTAAFPQNHRLPLTHRIACGAVLGGIWAVGYFGIAWRIAPVADPTTALDTAIPFIGWTVWIYLAGLAWIIAPLALVREPRLFRRAAFAYAIAIGAGFLCFTALQTEAPALRAQAVPDGLGTATAWALLTLHRMDAPVNLLPSLHVALAWLAAWALGRQRRPWRHACHVTAVAITASVCLVKQHTVLDAVAGLLLAWLCARLATAGRRDAIA
>NZ_CP052091.1|WP_071624021.1|460247_461261_-|peptidase
MPWAVTLIVKDCGSSAPIPGALVTDGVGGGYTDSYGQFIAVIDDAYTGYVVQISKANYSARNFTFDRSQIGTVQNTCLTVYVAPPSGGGGGGWQISCFIVTAATGSETSEEVAGMRALRDRVSARSALAGRLIEAIYDEYWQFSPAIADRIRDSESARMAVMALVVRPLFAWYQLAGQLALAPSDDAAVGQAEKALRGACPRYLGPAKVAGYLQQLADGRALPASMPPLLAQLAPRLQQALGLPLVRWAILEPLLRTWQGAADHLDMRQQVAAWLGGAPLDTLAMPDAATLHAELADLASLLAFDADARSTVGARLAAAWPASAEALARVDLCERQT

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Crispr_ID: NZ_CP052091_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP052091_2

1160178-1160358

Orphan

Consensus_repeat	Method
GCGGGCGCGCAAGCACTGGCTGCCAACACCGCGCTCA	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP052091_2

>merge|NZ_CP052091|2|1160178-1160358|PILER-CR
GCGGGCGCGCAAGCACTGGCCGACAACACTGCGCTCACCACGCTCCGCGTCACCGGCAATCAGATCGCTATGGCGGGCGCGCAAGCACTGGCTGCCAATCGCAGCCTGACCAAGCTCAATATCAGCCAGAATGACATCCGGTCCGCGGGCGCGCAGGCACTGGCTGCCAACACCTCGCTCA

>NZ_CP052091|2|1|1160178-1160358|PILER-CR
GCGGGCGCGCAAGCACTGGCCGACAACACTGCGCTCA	CCACGCTCCGCGTCACCGGCAATCAGATCGCTATG
GCGGGCGCGCAAGCACTGGCTGCCAATCGCAGCCTGA	CCAAGCTCAATATCAGCCAGAATGACATCCGGTCCGCGGGCGCGCA
GGCACTGGCTGCCAACACCTCGCTCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP052091.1\|WP_058908737.1\|1167060_1167912_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|119349
NZ_CP052091.1\|WP_016723104.1\|1161781_1162444_+\|membrane-protein	unknown	unknown	gnl\|CDD\|187560
NZ_CP052091.1\|WP_028854356.1\|1168332_1168752_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP052091.1\|WP_071507965.1\|1154946_1156140_+\|FAD-dependent-monooxygenase	unknown	unknown	gnl\|CDD\|235980
NZ_CP052091.1\|WP_058908707.1\|1149465_1151166_+\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|372139
NZ_CP052091.1\|WP_016727472.1\|1171662_1174806_+\|efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|226220
NZ_CP052091.1\|WP_071507963.1\|1162485_1163355_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|212492
NZ_CP052091.1\|WP_071653892.1\|1164846_1166322_-\|ISNCY-family-transposase	unknown	unknown	gnl\|CDD\|379267
NZ_CP052091.1\|WP_028854351.1\|1157460_1158567_+\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP052091.1\|WP_071624095.1\|1170124_1171666_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|379862
NZ_CP052091.1\|WP_080511113.1\|1152115_1153030_-\|LLM-class-oxidoreductase	unknown	unknown	gnl\|CDD\|274657
NZ_CP052091.1\|WP_011004209.1\|1156221_1157163_-\|transcriptional-regulator-GcvA	unknown	unknown	gnl\|CDD\|182990
NZ_CP052091.1\|WP_071507962.1\|1163354_1163603_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP052091.1\|WP_058908705.1\|1153877_1154807_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176114
NZ_CP052091.1\|WP_071624094.1\|1168823_1170128_+\|TolC-family-protein	unknown	unknown	gnl\|CDD\|273829
NZ_CP052091.1\|WP_011004204.1\|1151628_1152012_-\|DUF4437-domain-containing-protein	unknown	unknown	gnl\|CDD\|380365
NZ_CP052091.1\|WP_058908706.1\|1153106_1153775_-\|DsbA-family-protein	unknown	unknown	gnl\|CDD\|225355
NZ_CP052091.1\|WP_119889937.1\|1149281_1149467_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP052091.1\|WP_016723105.1\|1161158_1161728_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP052091.1\|WP_139274313.1\|1151216_1151579_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP052091.1\|WP_058908737.1\|1167060_1167912_+\|hypothetical-protein	gnl\|CDD\|119349	cd00598, GH18_chitinase-like, The GH18 (glycosyl hydrolase, family 18) type II chitinases hydrolyze chitin, an abundant polymer of beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a major component of the cell wall of fungi and the exoskeleton of arthropods. Chitinases have been identified in viruses, bacteria, fungi, protozoan parasites, insects, and plants. The structure of the GH18 domain is an eight-stranded beta/alpha barrel with a pronounced active-site cleft at the C-terminal end of the beta-barrel. The GH18 family includes chitotriosidase, chitobiase, hevamine, zymocin-alpha, narbonin, SI-CLP (stabilin-1 interacting chitinase-like protein), IDGF (imaginal disc growth factor), CFLE (cortical fragment-lytic enzyme) spore hydrolase, the type III and type V plant chitinases, the endo-beta-N-acetylglucosaminidases, and the chitolectins. The GH85 (glycosyl hydrolase, family 85) ENGases (endo-beta-N-acetylglucosaminidases) are closely related to the GH18 chitinases and are included in this alignment model.	1.94379e-07
NZ_CP052091.1\|WP_016723104.1\|1161781_1162444_+\|membrane-protein	gnl\|CDD\|187560	cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical (a) SDRs. Atypical SDRs in this subgroup include CC3 (also known as TIP30) which is implicated in tumor suppression. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine rich NAD(P)-binding motif that resembles the extended SDRs, and have an active site triad of the SDRs (YXXXK and upstream Ser), although the upstream Asn of the usual SDR active site is substituted with Asp. For CC3, the Tyr of the triad is displaced compared to the usual SDRs and the protein is monomeric, both these observations suggest that the usual SDR catalytic activity is not present. NADP appears to serve an important role as a ligand, and may be important in the interaction with other macromolecules. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	8.50909e-14
NZ_CP052091.1\|WP_071507965.1\|1154946_1156140_+\|FAD-dependent-monooxygenase	gnl\|CDD\|235980	PRK07236, PRK07236, hypothetical protein; Provisional.	0
NZ_CP052091.1\|WP_058908707.1\|1149465_1151166_+\|tyrosine-type-recombinase/integrase	gnl\|CDD\|372139	pfam12482, DUF3701, Phage integrase protein. This domain family is found in bacteria, and is approximately 100 amino acids in length. The family is found in association with pfam00589.	3.4448e-27
NZ_CP052091.1\|WP_016727472.1\|1171662_1174806_+\|efflux-RND-transporter-permease-subunit	gnl\|CDD\|226220	COG3696, COG3696, Putative silver efflux pump [Inorganic ion transport and metabolism].	0
NZ_CP052091.1\|WP_071653892.1\|1164846_1166322_-\|ISNCY-family-transposase	gnl\|CDD\|379267	pfam13565, HTH_32, Homeodomain-like domain.	3.33484e-07
NZ_CP052091.1\|WP_071507963.1\|1162485_1163355_+\|SDR-family-oxidoreductase	gnl\|CDD\|212492	cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs. Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	1.64083e-90
NZ_CP052091.1\|WP_080511113.1\|1152115_1153030_-\|LLM-class-oxidoreductase	gnl\|CDD\|274657	TIGR03571, lucif_BA3436, luciferase-type oxidoreductase, BA3436 family. This family is a distinct subgroup among members of the luciferase monooxygenase domain family. The larger family contains both FMN-binding enzymes (luciferase, alkane monooxygenase) and F420-binding enzymes (methylenetetrahydromethanopterin reductase, secondary alcohol dehydrogenase, glucose-6-phosphate dehydrogenase). Although some members of the domain family bind coenzyme F420 rather than FMN, members of this family are from species that lack the genes for F420 biosynthesis. A crystal structure, but not function, is known (but unpublished) for the member from Bacillus cereus, PDB\|2B81. [Unknown function, Enzymes of unknown specificity].	5.36069e-159
NZ_CP052091.1\|WP_011004209.1\|1156221_1157163_-\|transcriptional-regulator-GcvA	gnl\|CDD\|182990	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional.	2.14463e-153
NZ_CP052091.1\|WP_058908705.1\|1153877_1154807_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176114	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain. This CD includes the substrate binding domain of LysR-type transcriptional regulator (LTTR) CrgA and its related homologs. The LTTRs are acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes such as amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to name a few. In contrast to the tetrameric form of other LTTRs, CrgA from Neisseria meningitides assembles into an octameric ring, which can bind up to four 63-bp DNA oligonucleotides. Phylogenetic cluster analysis further showed that the CrgA-like regulators form a subclass of the LTTRs that function as octamers. The CrgA is an auto-repressor of its own gene and activates the expression of the mdaB gene which coding for an NADPH-quinone reductase and that its action is increased by MBL (alpha-methylene-gamma-butyrolactone), an inducer of NADPH-quinone oxidoreductase. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	4.52644e-87
NZ_CP052091.1\|WP_071624095.1\|1170124_1171666_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|379862	pfam16576, HlyD_D23, Barrel-sandwich domain of CusB or HlyD membrane-fusion. HlyD_D23 is the combined domains 2 and 3 of the membrane-fusion proteins CusB and HlyD, which forms a barrel-sandwich. CusB and HlyD proteins are membrane fusion proteins of the CusCFBA copper efflux system in E.coli and related bacteria. The whole molecule hinges between D2 and D3. Efflux systems of this resistance-nodulation-division group - RND - have been developed to excrete poisonous metal ions, and in E.coli the only one that deals with silver and copper is the CusA transporter. The transporter CusA works in conjunction with a periplasmic component that is a membrane fusion protein, eg CusB, and an outer-membrane channel component CusC in a CusABC complex driven by import of protons.	3.18372e-86
NZ_CP052091.1\|WP_058908706.1\|1153106_1153775_-\|DsbA-family-protein	gnl\|CDD\|225355	COG2761, FrnE, Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism].	3.59299e-86
NZ_CP052091.1\|WP_011004204.1\|1151628_1152012_-\|DUF4437-domain-containing-protein	gnl\|CDD\|380365	cd02237, cupin_DAD_ChrR, 2,4'-Dihydroxyacetophenone dioxygenase (DAD) and anti-sigma factor ChrR, and similar proteins; cupin domain. This family includes the proteins 2,4'-Dihydroxyacetophenone dioxygenase (DAD) and anti-sigma factor ChrR. DAD catalyzes the oxidation of 2,4'-dihydroxyacetophenone to 4-hydroxybenzoate and formate as part of the 4-hydroxyacetophenone catabolic pathway. The enzyme is a homotetramer containing one iron per molecule of enzyme. Anti-sigma factor ChrR is a member of the ZAS (Zn2+ anti-sigma) subfamily of group IV anti-sigmas. It inhibits transcriptional activity by binding to the Rsp extra cytoplasmic function (ECF) sigma factor E (sigmaE). Some ChrR members contain tandem repeats of two distinct homologous functional domains. Members of this family belong to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold.	4.62061e-07
NZ_CP052091.1\|WP_028854351.1\|1157460_1158567_+\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	1.08396e-53
NZ_CP052091.1\|WP_016723105.1\|1161158_1161728_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	2.12905e-14
NZ_CP052091.1\|WP_071624094.1\|1168823_1170128_+\|TolC-family-protein	gnl\|CDD\|273829	TIGR01844, Proteases_secretion_protein_PrtF, type I secretion outer membrane protein, TolC family. Members of this model are outer membrane proteins from the TolC subfamily within the RND (Resistance-Nodulation-cell Division) efflux systems. These proteins, unlike the NodT subfamily, appear not to be lipoproteins. All are believed to participate in type I protein secretion, an ABC transporter system for protein secretion without cleavage of a signal sequence, although they may, like TolC, participate also in the efflux of smaller molecules as well. This family includes the well-documented examples TolC (E. coli), PrtF (Erwinia), and AprF (Pseudomonas aeruginosa). [Protein fate, Protein and peptide secretion and trafficking, Transport and binding proteins, Porins].	4.64867e-09

>NZ_CP052091.1|WP_028854351.1|1157460_1158567_+|Gfo/Idh/MocA-family-oxidoreductase
MGTAEPSCRWGILGTAGIARKNWHAILHSGNGRIVAVGSRSAQTAQRFIAECQASAPAPYAVEAVEGYDALIRRPDIDALYIPLPTALRAEWAIKAARAGKHIVIEKPCGVTSADLLRIIDAANAAGVQFMDGVMFMHSSRLQAMRSVLDDGASVGDIRRITSHFSFDADAAWVERNSAVEPAGCLGDVGWYSIRLALFAMQYSMPVEVRGRILRSVKRPDGAGVVPTEFVGELLFDNGVTAALYSAFTTSRQQWADISGSKGYLHLKDFVLPHYGNEVAFTVGNDRFGGDGCFFNLERHEKTVSLPEYSNNHRTAQETGLYRTFGGLVLSGKREPFWPEVALKTQRVMDALLLSANAGGGPVAPIPA
>NZ_CP052091.1|WP_011004209.1|1156221_1157163_-|transcriptional-regulator-GcvA
MDLRKLPNLGALKMFEAAARLESFSRAAEALCVTHSAVSHQIRALEAELGMVLFKRDGRRITLTDPGRRYAERIRSALFEIAAATESMRTGDRERRLVISLLPSFAARWLTPRIGRFIERYPEIDVELQSTHVITDFNRDDVDVVLRLSDGNDPDLFVEPLLDEVFFPACAPTFNGGRLPKTPADLADVTLLRSDYEMWRAWFMAAGLEGWAEPRRGVLYQDASQLMQASMEGQGVGLVRRSLAMQEIINGRLVRLFDIDAPSPWTYWFICPQPLLDTFRVRALREWLHEEVAQFRALYERSPTAVTMAGRAA
>NZ_CP052091.1|WP_071507965.1|1154946_1156140_+|FAD-dependent-monooxygenase
MCTQLATHPHPVNPPPRALVIGGSLGGLFAGNLLRRIGWHVDLYERSAHDLDSRGGGIVLQPDVVEVFRRTGVDLGAMDLGVGSVHRAVLRPDGSIRSRHFAPQTQTSWSLIYTTLRAAFGDAHYHQAKTLARIEQNPPAGTVTAHFTDGSSETADLLIGADGGNSAVRRQLWPDKVPTYAGYLAWRGLVPEEAMPPTAREMLHGDFGFANNRGSHILGYLVPGEHNDVRPGHRLYNWVWYRVADTRLLGEIMTDREGRPRGHSIPEGMLDARWVAHLRDDARALLPPAFREIVEATAQPFAQAIRDLASDHMVSGRVVILGDAASIPRPHTAASTSKAAANALALADALQALPDDVPAALSRWEPEQIALGKALRRQGMEAGNYLLFQRPPEGQVA
>NZ_CP052091.1|WP_058908705.1|1153877_1154807_+|LysR-family-transcriptional-regulator
MDRFGALSAFVAVVEHGGFAPAARRLGLAPSSLTRQLNALEASLGTRLMNRSTRSVTLTEAGAQYYDDARRILEELDSADRTVSELAGPPSGLLRVTMPVAFCRLHVAPAIPAFLRRFPGMRLDIRLTDAMVNLVEDRIDVAIRLGALTAPNLVARKLAPHRRVICASPDYLGEHGTPAQPRDLAHHNCLLFDYLTGDSTWTLTRDGKREKVPVSGNLRANGSELLREAAMGGAGMLLMPTWLVGDDIAAGRLVPVLEPWTPTPGADEGEGAIWAVYLPNRRGSKKLAGFLDFLAQHFGAPPYWERYRS
>NZ_CP052091.1|WP_058908706.1|1153106_1153775_-|DsbA-family-protein
MTLTVTITSDFICPWCLIGERRLAKAIGALPGGDAVELKWRPFELNPAMRPEGMDRQTYRSLKFGSWERSRMLDAHTVEAARDDGIAFDYAAIAKTPNTFLAHRLNWFAARRGLATPIANAVFSAYFEHGRDIGDAAVLADIAAENGLGRDEVSAFLAGDERTRDVREAERAVQAGGVRSVPLFDIDGETVSGAQSVAAFEAALRRAIARTHACGTGACPVS
>NZ_CP052091.1|WP_080511113.1|1152115_1153030_-|LLM-class-oxidoreductase
MFQPGRLTLGLMLPTAPLDHGIPDMTGQLDLAADADRYGFAALWTRDVPLFDPQFNDAGQIYDPWVWLGQLATVTRTIALSTAGIVLPLRHPLHTAKAAASVDIVSAGRFLLGAASGDRPSEYPAFNRSHEARGAVYREYIDVIRRSTAEDYPALSGTFGTLRDLDLLPKPTGRHLPILAIGSAQQSLQWIARNLDGWVTYFRPVETQRPRLDLWRSVVETQAGGAFLPFAQSMFIDLADDPDTAPSPIFLGYRLGRNRLIEELQALARLGANHVGFNLRHSVRPARDVLQELAECVLPLFPSA
>NZ_CP052091.1|WP_011004204.1|1151628_1152012_-|DUF4437-domain-containing-protein
MRKPDVTVVDTNRIPWERLDVPELNAVIPQKICVVDGDTGMAVIKIRYQAGFTNVSHWHNCAHGMYVLDGILVTSAGSFGPGSFVWFPEGTTMSHGAQADNDVTFLFITNKPFDIHYTHLEGDAPGQ
>NZ_CP052091.1|WP_139274313.1|1151216_1151579_-|hypothetical-protein
MRPDGMHGHSIEQTIVLLLFALLLVNCSVIFSSFFLSMARLSAVGREQFRNARYPSIPTARIAPAIGCTQMSVIGGLGRIGAWFCHQFCDGIVLFKQGDCRGPQAMEGSPLSAGLPGRLS
>NZ_CP052091.1|WP_058908707.1|1149465_1151166_+|tyrosine-type-recombinase/integrase
MKTRLLPVAPSAGTLPGLPDAAELAVLRAWHAGLSAREAVERYLGERRAPGQSSRGILGRIRRQLAAFARRRQREDLALLFEIAATERARQGRVADQAVELLRTLPLPEPAISDDVALWLDARAVTVLRAAGIDTLADLTVRVPRRRRWWAAIPGLGQAGARRIEAFFAEHPRLTERAKALIAEQPRGVVVPWEQLRLPHEVDGSEGQFRAPRETSVLTADNDYEAVQAWLSLHESPATQRAYRKEAERLILWAIIERGRPLSSLTTEDAIAYRGFLRRPSPHERWVGPARPRASADWRPFTDGLSARSIAYSLSVLGAMFRWLIQQRYVLANPFAGIKVRGGGRTAALDASHAFSEGEWALVRTLADGLEWSYGWEAAAAQRLRFVLDFAYATGLRASELITARLGGIETDRQGDHWLSLIGKGGRAGKVALPPLARTALDRYLVERGLPVTQARWNPQTPLIGALGLDPGGGITGSRLWSVMRRFFRVAADLIEHDHTALAEKLRKASPHWMRHTHASHALARGAELTTVRDNLRHASISTTSIYLHGDDVKRARQIEAAFAAK
>NZ_CP052091.1|WP_119889937.1|1149281_1149467_-|hypothetical-protein
MGASLALSCGYCDKKSYRNRLVGIQRNGQSTQGFGLLAAAYATVQRGFKPWAVTGGLRTSF
>NZ_CP052091.1|WP_016723105.1|1161158_1161728_+|TetR/AcrR-family-transcriptional-regulator
MARPRSEDKRQTILRAATQLFAEEGLNAPTARIAKAAGVAEGTIFTYFANKDVLMNQLYLELKSQLRLALVPPPESAALREQVWLAWRTYVNWGIAHPEEHQVLAKLALSPKITETTQAEGSRAFCDVSCLLERAMAEGALRNQSPEFVGAMMGAMGDVTMVFIRNNPTSLEATCQDGFTAFWNAITGV
>NZ_CP052091.1|WP_016723104.1|1161781_1162444_+|membrane-protein
MRIILFGASGMVGASALREALKAPEVESVLCIGRRSCGIEHHKLRELRLPDLFDFAAVEDQLTGFDACIWAIGISSVGLDEIAYAKVTEELTLAWADVLLRLNPEFSFCYCSAGGAGGRSMWARVRQRVERALQAMPFRHAGAVRPGFIRPGPGIRSRTPAYQAGIVLLTPIFPLFPFFVRVFPFLFTTSEILGRAMLRVVEGRADRFILESTDINRLGA
>NZ_CP052091.1|WP_071507963.1|1162485_1163355_+|SDR-family-oxidoreductase
MQDLKNKVFLVTGATDGIGKAAATEFAKRGATVTLVGRNKAKTEGVVAELKAATGNENLDYLLCDLSRIAEVKRMAEAFKASHDRLDVLVNNAGATFKAPVLGPDGYELTFALNHLAYFQLTTSLLDLIRNTPGARVVSTSSSMQARGKIQLPDIATSLEGSGPNAYAASKLANILFTKELQRRLAGTTAVANCFEPGMVRTQFGGFGSDQGFLLNIVYALAKPFTSTPEQGADSLVWLATSPEAASLQGQYVSKRRPVTPQKQALDAKLAEDLWVLSEKLCTRASGRD
>NZ_CP052091.1|WP_071507962.1|1163354_1163603_+|hypothetical-protein
MLLPCAPKQAAIHGASDAANSCSRLLIHHQLQREGLAYQLKSIEQVQQITEERLREYNEQCTRGTPGALAVPGGGSVDLLVS
>NZ_CP052091.1|WP_071653892.1|1164846_1166322_-|ISNCY-family-transposase
MGRPDTITMSMRELDRCKVIQAVADDGLMVWRAAEKLGISKRQVERLVLRYREDGPQGLCSRKWGQPGHHQLPPGLESRVCGLIRDSYADFGPTLAAEKLRERHGIEISKACVRRIMIDAGFWVPRRQRPPKVHQPRNRRACLGELVQIDGSDHAWFEDRAPACTLLVYVDDATGRLMQLLFVPTESTQAYFAATRAYLERHGKPQAFYSDKAGVFRVNARDNAEGRGYTQFGRALFELNIDILCANTSQAKGRVERMNGVLQDRLVKELRLRRVSSMEAANAYATTFIADFNARFAKVPRSDFDAHRPLRGDEDLARIFCWREWRKVSQNLTLQYAKVMYLLEDRPESRRWIHRYVEVAEYPDGKIELWADGTALPYTTYDRLAQIDQGAIVDNKRLGHTLAIAAELQAQRDDRRWAGPSRTLVGEPPRPTHPAPQTKRQRQINRLDLERAIHQVGPPPLPSSPATRTTALRRQPKKNQTQHKAHARADI
>NZ_CP052091.1|WP_058908737.1|1167060_1167912_+|hypothetical-protein
MSFEIATWYDTWNSTGLDNLAQRKVPLGYASRYNLAFGEFVPCANGYTVDLNAQFASQVLTQIRTQAPGVLIYAGVGDTGLSATVLDNRRNNNRSTANIVAYLQQQGLNGIAIDSEQDGMTSVPELVSQLGPAFKQAGLGIAVSVPWPGNGPVGLYGDNAVAAFNQHVDAVELQDYSSEGTPADIQVWIHAGVRRAILMGGVCTENGNVQTSLEDTAAWTTFALQSQVRGMFSWRLDNDHGQHGTQEDVDPTFTGAQTIYETVQNYGSGADRSSGVLDVAGST
>NZ_CP052091.1|WP_028854356.1|1168332_1168752_+|hypothetical-protein
MRRSPRWLWFAGFLILTFLTVQLAAAAYACADGRVAVRPVMAMDEMADMADMTESCPEMAKRTPQDDSPHDGLCLEHCQAGTKSADHVSPQIPAFLPILLGQIEPTPIAALVPLSLAQGDAIARAPPPPIAILHCCFRT
>NZ_CP052091.1|WP_071624094.1|1168823_1170128_+|TolC-family-protein
MHLRFPPRGGRLFALAAALIAVSRLAYAEATCALSLQEAVGLASARSADAETSRAAIQSANEMAVAAGQLPDPVLKFGLDNVPLNKSDQFSLSRDFMTQRSISVVQEFTRADKRRAKADRYAAEAEAAEARRTVGLAEVQRNAVAAWLDRWYAEQTGVLLGHHGHPLELARQAAMAAYRSGRGTRADVLAADLEVQKLHDRQDENRAAIDMAMVSLERWIGPAARRPLGDRPTLEVPSSVQRLETDAFDAVPEVAVARRDVALAETEIRAAAEAKKPDVTVELMYSQRGSAYSNMGSLNISFPVPWNQGHRQDREVAAKLAQAQEARAKSEILRRNTLAMVTTRLAELRRNLDRLKRYDETTLPLANAQANAALTAYRTNTGSLSAVAEANHRAVDTAQERLALEARTAKLWADLAFLVPLPTAQTESATGSPQ
>NZ_CP052091.1|WP_071624095.1|1170124_1171666_+|efflux-RND-transporter-periplasmic-adaptor-subunit
MTKTLIATVAGALLISAAAYGGYRIGLSRGTQSTLANASMSSPAGPNGLKAGDVDPQTGKRVLYWHDPMVPGQRFDKPGKSPFMDMQLVPVYADGDAGGSGVAIDSRVAQNLGVRTAEARLGNLGAVLEAPGSVAVDERSVQVIQARTSAFVQQVAVRATLDPVRRGQTLVSLYSPDWVAAQEEYLAVSRQAGHGQPDLVGAAKARMLQAGMTPGQISAVTASGKLQPALAITSPIDGFVMEVAVRDGMTVTPGMTLFRLANLSRVWIIAEVPEAQGRTVAPGAQVKVSVAGLAEPETATVDAILPDVNAATRTIKVRIVLPNQDKRLVPGMFATVRFDGGQDKEALLIPSEAVIRTGQHSIVMVDGGQADFVPTEIQTGREADGRVEVLQGLQAGQKVVTSGQFLIDSEASLRGTTERMTAPSAASSPAAATTEHEGTGRIEAANGEGLTISHGPIPSLQWGAMTMDFAAPPAGLPKGLKPDERVRFRFHLDKAGMAVLSSVEPAGDTGGKP
>NZ_CP052091.1|WP_016727472.1|1171662_1174806_+|efflux-RND-transporter-permease-subunit
MIARLIFASIRNRFLVLLTTALLTAWGLWAVRSTPLDALPDLSDVQVIIRTPFPGQAPQIVENQVTYPLTTTMLSVPGAKTVRGYSFFGDSFVYVLFEDGTDLYWARSRVLEYLNQVQSRLPVAAKPALGPDATGVGWVYEYALVDKTGRHDLAQLRALQDWFLRFELKALPNVAEVASVGGMVKQFQVVLQPDKLRAYNLSQAKVLAALKGANQETGGSVLELGEAEYMVRASGYLKTLDDFRQIPLATSDAGVAVRLGDVATVQLGPEMRRGIAELDGQGEVAGGVIVMRSGKNALETIEAVKAKLAALRKSLPVGVEIVPVYDRSALIHRAVDNLTHKLIEEFIVVALVCVVFLFHLRSALVAIVSLPLGVLAAFLVMRHQGVNANIMSLGGIAIAVGAMVDAAVVMIENAHKHLERWHETHPGHALAGHERWGVIGEAAAEVGPALFFSLLIITLSFIPVFTLEAQEGRLFSPLAFTKTYSMAAAAGLSVTLVPVLMGYLIRGQIPSEQSNPLSRWLIRLYQPVLARVLAYPRATVAIALVLLAATAWPILRTGGEFMPPLDEGDLLYMPSALPGLSAGKAAQLLQQTDRLIKAVPEVATVFGKAGRADTATDPAPMEMFETTIRFKPRDQWRPGMTTDKLVDELDRVVKVPGLSNIWVPPIRNRIDMLATGIKSPVGIKVAGTDLQQIDRLTTQIEAAVKTVPGVTSALAERLSGGRYIDVDIHRMAAGRYGLNIEDVQSIVASAIGGDNVGEVVDGLARFPVNLRYPRDYRDSVEQLRSLPIVTDRGQQIVLSDVADIRVVSGPPMLRSENARLSGWVYVDIRGRDLRSAVRDMQAAVAKAVPMPAGYALSWSGQFEYLERASAKLKVVVPFTLLIIFVLLYLVFGRIDEALLIMGTLPLALIGGFWLLYGLGYNLSVAGVVGFIALAGVAAEFGVIMLLYLKQAWTERQERGQTTTDALLEAIQEGAVLRVRPKAMTVAVVLAGLIPIMWSHGTGSEVMQRIAAPMVGGMVTAPLLSLFVVPAVYLLLRRRSVSSFSQPR

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Crispr_ID: NZ_CP052091_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP052091_3

2050983-2051082

Orphan

Consensus_repeat	Method
CACGCAGAAACGGGTACGCTC	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP052091_3

>merge|NZ_CP052091|3|2050983-2051082|PILER-CR
CACGCAGAAACGGGTACGCCCCGATTTTGGCGACGCCCCATTCATACGCAGAAACGGGTACGCTCCAGCATTTATTGATCCCGCAGAAATGGGTACGCTC

>NZ_CP052091|3|2|2050983-2051082|PILER-CR
CACGCAGAAACGGGTACGCCC	CGATTTTGGCGACGCCCCATTCA
TACGCAGAAACGGGTACGCTC	CAGCATTTATTGAT
CCCGCAGAAATGGGTACGCTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP052091.1\|WP_162494299.1\|2041286_2041442_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP052091.1\|WP_020425359.1\|2045981_2046440_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP052091.1\|WP_011004922.1\|2051144_2052449_-\|NCS2-family-permease	unknown	unknown	gnl\|CDD\|225161
NZ_CP052091.1\|WP_058907740.1\|2043903_2044689_+\|DUF2334-domain-containing-protein	unknown	unknown	gnl\|CDD\|225773
NZ_CP052091.1\|WP_016722279.1\|2042260_2043763_+\|RNA-polymerase-factor-sigma-54	unknown	unknown	gnl\|CDD\|237109
NZ_CP052091.1\|WP_172833521.1\|2049565_2050864_+\|integrase	unknown	unknown	gnl\|CDD\|227307
NZ_CP052091.1\|WP_058907741.1\|2040053_2041214_+\|sigma-54-dependent-Fis-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225114
NZ_CP052091.1\|WP_014632190.1\|2038140_2039526_-\|sigma-54-dependent-Fis-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225114
NZ_CP052091.1\|WP_019719788.1\|2041509_2041884_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP052091.1\|WP_058907739.1\|2044719_2045589_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP052091.1\|WP_058907738.1\|2046690_2049081_-\|PAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|223715

>NZ_CP052091.1|WP_172833521.1|2049565_2050864_+|integrase
MPSTHPAPDAIAPGPHPAAGASSAVHAATEADLLAHARDRERVQAWLDARAGGARAVGPSTLSQYRMEAERVCWYARAVGKPIARWQREDAHAYLRFLQDPPAWAISARGHARDEAGWTPLRGPLSARSLRQCSVIAANLCGWLQRSGHLRANPFLDDDGIVIALPDAAPATLPPAPPPPDPATALCAPDMALLVDAVRTRVALGREARLRQARDGFLAELLAHAGLRVAELVGARMGDVALHAVPEARRAADPALPPSVWLLGVGAGRAQRWLPCDALMATLRAYRTAFGLSPLPLPGEATPLLLSVRKRSPRRADGTIIDSPALRRDFGERRGIGSRSQLLQIIKAMLAEAAEHARALGHADAAERLAHASLRGLRGAHLRERLASGEAARDIAHALGLAALPSAAVRARKADLTSSILDAARQLAVPRT
>NZ_CP052091.1|WP_058907738.1|2046690_2049081_-|PAS-domain-containing-protein
MKEPVVSHFVPERGITSAPGRSYGTEPLDVFWVDDLLDGTRLHVSAAARQRWGMAPETLCGPREHWLAHVHSGDHAALWAAWQGLAQGRDFALEYRWIGTDGAEHRVRECGYRLPAQGGAATHAVGVVEDMTQRLRTLAELTESEFQLQWLAESIPFPIVQLGPDHCIRFANHAYAQRFGLPAADVLGRHVRELMGHEAYQRVLAHLMKGFAGQRVDFEMELEYPYVGPGRRFIHAAYTPQRGPDGKVVALVCIIEDITERKEAERERFRHQREFVTLVENAPDIIARLDPALRCVYINRAVTEAFGVPSGELIGQALSDSGLPACITGPLEAAAQCAFDTGGEQALTLHLEADAARPHVAHYNARVIPEADRHGEMESALLIIYDVSERTEAERERNALLLREQAARAQAEAAAHARDQFLAVVSHELRSPLNGIQSWAYVLENQLAEGPQPVQRALAGIRTGVAQQVRLIEDLLDATRVMSGKLRLTRQPFPLRTALERALDSVRAQAAERRITLHEAWSLGTEEIDGDADRIQQIVWNLLSNAIKFTQEGGDVWLAADVSGEVARIVVRDNGRGIAPAFVPHLFDPFRQADGSHTRRTGGLGLGLALVKRLTELHGGLVHAQSDGEQHGAIFTVYLPLHEGAELTAALAEDVVRPGPLPSLGGLRVLLIDDQQDAREALATLLGQVHAEVGSAGSGDEAIAQLEAWGGLRRPHAVVCDIALPDEDGYAILQRIRGWERRHLPAGVAQVPAIALTAFAQPHDRARALASGFQEHLSKPVSPRDLVRALRTLARR
>NZ_CP052091.1|WP_020425359.1|2045981_2046440_-|hypothetical-protein
MHQPLRSGVRSPLTRDDTPTQGAAYPPVSGTRPAAAPASTARERVEAALGEPEHEVQSFVHGACLPHERDQYVAEQGSGPRDTIEQAARDIESGLLDTDLHDTQGLECVVRERHAAGHCDPDRELANRTADAIERNRQMPGAPSGGTGERRR
>NZ_CP052091.1|WP_058907739.1|2044719_2045589_-|hypothetical-protein
MQGQLRAVALGCVVVGLLAACGGGDDSGSGSVAASSSGVASPADSASLGSDCFVVPGTGKTATATASFVAPVEVDVATVTGLGAQTFEGQSYTALDVRNRIDQVLNSDQHHTLYMLPNAPYLPAGAITFPSAGDTGPQQRYAYTYAAMTLEQLRSAVVGGKATFSPLVVPTLQPVVPTVADFKLNTPVTLTMFEKRAGGTNPMGASFASNSVKELTLTYAGRESVTVGSATYGQACRMNVSVRRTTPNFNVVPFSIENVGKVTLWFAPNVGLVKFSMDGLDTAIVPAAN
>NZ_CP052091.1|WP_058907740.1|2043903_2044689_+|DUF2334-domain-containing-protein
MSRYLVIAMHDVTPANWPACSVLLSALDEVCPVPKSLLVIPNFHRGPTARSSARFCRVLAERLEQGDELVLHGYAHLDEQPPGGFVDQLIRTHYTAGEGEFSVMPLGAARRRLETGAAWFAANGWPLHGFVAPAWLMSAATWQALDGLPLRYTTTLRHFYLLHPSRSMLAPCLTYSVQTGPRRLASRYYVRWLAHHRAHAPLLRLGLHPTDAAHPDVIRHWQDLLAACLETRLPVTKNGFAQAFAEALMGKPDMPQPEPSY
>NZ_CP052091.1|WP_016722279.1|2042260_2043763_+|RNA-polymerase-factor-sigma-54
MVKAALEMRAKQHLALTPRLQQSVKLLQLSATEFAQEMQEALASNPFLEEVDDNTGAPPEAARPGEAMPGTEADGATADHSPPDEAPLETTTSAIETDPAIAASDEFPADFGSYTSYGPAHHGDGEDSDIGEWVHATPTLREHLRQELLSYRLSERDSLLALTVIEALDDDGYLRQTLFELMPLAPVEPAPTEKEMQIALALVQSLDPPGVAARDLSECLRLQIEARPADTEAEERVQEIAQDIVRSHLPRLAKRDLTHIRRAVGCDEDELREACALIRTLDPRPGLRFSQAHAGYVVPDVIVAKIKGKWVAVTNPAVAPCARINKVYAELFAQTRGHHRTPLAHQLQEARWLIRNAQQRFATIQRVAEAIVAHQKHFLEYGEVAMRPLVLRDVAEELGLHESTISRATGNKFMATPRGIFEFKYFFSRQLATDTGGACSAASVRALLKEMIEAEDAQAPLSDVSLAKMLAEQGVIVARRTVAKYRGLMRIAPAELRRQV
>NZ_CP052091.1|WP_019719788.1|2041509_2041884_-|hypothetical-protein
MQPSRTLTATLLGVALALGVTAALAQTPMAPASTDSQESGTPTRAPGKRTAPPASAADPAAGASATGEPTSGAGGDRKPHAKKHRHKKPAEGKATDAAAGAQSGGSDAATGMGNPQPGGSKPGQ
>NZ_CP052091.1|WP_162494299.1|2041286_2041442_+|hypothetical-protein
MPALARMLAAAALARFVAMRAARHVLDPTVQARNVRTASDADWRGDFHWHG
>NZ_CP052091.1|WP_058907741.1|2040053_2041214_+|sigma-54-dependent-Fis-family-transcriptional-regulator
MSLSEAFADDRAVTTGRLPCPPGLADRADTDAIDVFGDAARLTAFANPPAVSVSAPVVADPDFGHLYGHSTVMRTLYGQIGKVAGTLATVLIIGESGTGKELIARTVHDMSPRADQAFIAVNCGAISPNLIESELFGHEKGSFTGALQRHTGYFEQACNGTIFLDEITEMPVEMQVKLLRVLETGTFMRVGGTEPIETRARIIAATNRNLPEAVSDGTFREDLMYRLAVVPLHVPPLRDRDEDIEALAHHFLAQFNAAHQTDKTFARSALSALRQHPWPGNVRELRNAVQRGYILGEKTVELAMPLVSLRSPSRPSVKEGVLNVSVGVTLAEAQRVMILATLEHFRGDKRQAAKTLGVSLKTLYNRLDLYHSQSQSQGTEAAGLPA
>NZ_CP052091.1|WP_014632190.1|2038140_2039526_-|sigma-54-dependent-Fis-family-transcriptional-regulator
MPHILIVEDDASARAALGELVSAEGFTTAQAGSLRDARIQISRHSPDAVLIDLVLPDGNGMDLLEDIPSHSGTEIIVMTGHASVETAVEALRMGAADYLVKPVNFQRLKSILARIPRPGDLKAEIGSLRGELRRLGLFGQMLGNSPAMQTLYDQVSRVAPTEATVLLIGESGTGKELAAQTIHDLSLRRKQPFLPVNCGAISPNLIESEMFGHERGSFTGADRQHKGYFERANGGTLFLDEITEMPVELQVKLLRVLETGVFMRVGTNREIDTDVRVIAATNRDPEEAVADGKLRADLYHRLNVFPMQLPPLRERGKDVELLAQHFLDQLNAQNSSKKTFLPPAMDTLRAYNWPGNVRELRNYVQRAYIMSDDAGISTEAVPLQVSTTQASSGSTLTIPVGTSLASADKKIILATLEQCGGVKKRAAELLGISLKTLYNRLEEYGSSNSEGENGKAQTTEA
>NZ_CP052091.1|WP_011004922.1|2051144_2052449_-|NCS2-family-permease
MSWLARFFKLEEHQTDVRTEVVAGLTTFLTMAYIVFVNPNILADAGVPHDAVFVATCVAAAIGTAIMGLYANYPIAMAPGMGLNAYFAYSVVKGMGFTWQAALGAVFVSGCLFMLVSLFRIREMIINGIPHSIRIAITAGIGLFLGIVSLRGAGLVVGNPATLVALGDVHQPSVILAVIGFFLIVTLDHLRVKGAILIGILAVTVASFFVAGNTFHGVVSMPPPIAPTLLQLDIQGALSVGILNVVLVFFLVELFDATGTLMGVANRAGLLKAGRMDRLNKALLADSTAIVAGSMLGTSSTTAYIESAAGVQAGGRTGLTALTVAVLFLACLFIAPLAGVVPAYATAPALLYVSCLMLRELVELDWADTTESVPAVLTALMMPFTYSIANGVAFGFVTYSGLKLFGGRWREVPAVVWIISLIFLFRFFYLQAGH

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP052091_2	2.1\|1160215\|35\|NZ_CP052091\|PILER-CR	1160215-1160249	35	NZ_CP049790	Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence	981524-981558	0	1.0
NZ_CP052091_2	2.1\|1160215\|35\|NZ_CP052091\|PILER-CR	1160215-1160249	35	NZ_CP016915	Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence	1577013-1577047	0	1.0
NZ_CP052091_2	2.1\|1160215\|35\|NZ_CP052091\|PILER-CR	1160215-1160249	35	CP023015	Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence	919975-920009	0	1.0
NZ_CP052091_2	2.1\|1160215\|35\|NZ_CP052091\|PILER-CR	1160215-1160249	35	NZ_CP052129	Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence	1024943-1024977	0	1.0
NZ_CP052091_2	2.1\|1160215\|35\|NZ_CP052091\|PILER-CR	1160215-1160249	35	NZ_CP052111	Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence	903309-903343	0	1.0
NZ_CP052091_2	2.1\|1160215\|35\|NZ_CP052091\|PILER-CR	1160215-1160249	35	NZ_CP052113	Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence	903309-903343	0	1.0
NZ_CP052091_2	2.1\|1160215\|35\|NZ_CP052091\|PILER-CR	1160215-1160249	35	CP023013	Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence	1067037-1067071	0	1.0
NZ_CP052091_2	2.1\|1160215\|35\|NZ_CP052091\|PILER-CR	1160215-1160249	35	NZ_CP049794	Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence	1690320-1690354	0	1.0
NZ_CP052091_2	2.1\|1160215\|35\|NZ_CP052091\|PILER-CR	1160215-1160249	35	NZ_CP049788	Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence	993332-993366	0	1.0
NZ_CP052091_2	2.1\|1160215\|35\|NZ_CP052091\|PILER-CR	1160215-1160249	35	NZ_CP015116	Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence	1329634-1329668	0	1.0
NZ_CP052091_2	2.1\|1160215\|35\|NZ_CP052091\|PILER-CR	1160215-1160249	35	NZ_CP049792	Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence	1465481-1465515	0	1.0
NZ_CP052091_2	2.1\|1160215\|35\|NZ_CP052091\|PILER-CR	1160215-1160249	35	NZ_CP022783	Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence	1072708-1072742	0	1.0
NZ_CP052091_2	2.1\|1160215\|35\|NZ_CP052091\|PILER-CR	1160215-1160249	35	NZ_CP022795	Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence	1069410-1069444	0	1.0
NZ_CP052091_2	2.1\|1160215\|35\|NZ_CP052091\|PILER-CR	1160215-1160249	35	NZ_CP009763	Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence	1045411-1045445	0	1.0
NZ_CP052091_2	2.1\|1160215\|35\|NZ_CP052091\|PILER-CR	1160215-1160249	35	NZ_CP052085	Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence	1132591-1132625	0	1.0
NZ_CP052091_2	2.1\|1160215\|35\|NZ_CP052091\|PILER-CR	1160215-1160249	35	NZ_CP052095	Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence	1160214-1160248	0	1.0
NZ_CP052091_2	2.1\|1160215\|35\|NZ_CP052091\|PILER-CR	1160215-1160249	35	NZ_CP052077	Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence	1044675-1044709	0	1.0
NZ_CP052091_2	2.1\|1160215\|35\|NZ_CP052091\|PILER-CR	1160215-1160249	35	NZ_CP052087	Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence	1132591-1132625	0	1.0
NZ_CP052091_2	2.1\|1160215\|35\|NZ_CP052091\|PILER-CR	1160215-1160249	35	NZ_CP052097	Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence	1160214-1160248	0	1.0
NZ_CP052091_2	2.1\|1160215\|35\|NZ_CP052091\|PILER-CR	1160215-1160249	35	NZ_CP052127	Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence	1132591-1132625	0	1.0
NZ_CP052091_2	2.1\|1160215\|35\|NZ_CP052091\|PILER-CR	1160215-1160249	35	NZ_CP052079	Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence	1044698-1044732	0	1.0
NZ_CP052091_2	2.1\|1160215\|35\|NZ_CP052091\|PILER-CR	1160215-1160249	35	NZ_CP052089	Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence	1132595-1132629	0	1.0
NZ_CP052091_2	2.1\|1160215\|35\|NZ_CP052091\|PILER-CR	1160215-1160249	35	NZ_CP052093	Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence	1160214-1160248	0	1.0
NZ_CP052091_2	2.1\|1160215\|35\|NZ_CP052091\|PILER-CR	1160215-1160249	35	NZ_CP052101	Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence	1160214-1160248	0	1.0
NZ_CP052091_2	2.1\|1160215\|35\|NZ_CP052091\|PILER-CR	1160215-1160249	35	NZ_CP052099	Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence	1160214-1160248	0	1.0
NZ_CP052091_2	2.1\|1160215\|35\|NZ_CP052091\|PILER-CR	1160215-1160249	35	NZ_CP052125	Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence	1044698-1044732	0	1.0
NZ_CP052091_2	2.1\|1160215\|35\|NZ_CP052091\|PILER-CR	1160215-1160249	35	NZ_CP052123	Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence	1044698-1044732	0	1.0
NZ_CP052091_2	2.1\|1160215\|35\|NZ_CP052091\|PILER-CR	1160215-1160249	35	NZ_CP052131	Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence	1132590-1132624	0	1.0
NZ_CP052091_2	2.1\|1160215\|35\|NZ_CP052091\|PILER-CR	1160215-1160249	35	NZ_CP052081	Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence	1044698-1044732	0	1.0
NZ_CP052091_2	2.1\|1160215\|35\|NZ_CP052091\|PILER-CR	1160215-1160249	35	NZ_CP052083	Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence	1044698-1044732	0	1.0
NZ_CP052091_2	2.1\|1160215\|35\|NZ_CP052091\|PILER-CR	1160215-1160249	35	NZ_CP052091	Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence	1160215-1160249	0	1.0
NZ_CP052091_2	2.2\|1160287\|46\|NZ_CP052091\|PILER-CR	1160287-1160332	46	NZ_CP021449	Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence	1370728-1370773	0	1.0
NZ_CP052091_2	2.2\|1160287\|46\|NZ_CP052091\|PILER-CR	1160287-1160332	46	CP023013	Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence	1067098-1067143	0	1.0
NZ_CP052091_2	2.2\|1160287\|46\|NZ_CP052091\|PILER-CR	1160287-1160332	46	NZ_CP049790	Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence	981452-981497	0	1.0
NZ_CP052091_2	2.2\|1160287\|46\|NZ_CP052091\|PILER-CR	1160287-1160332	46	NZ_CP049794	Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence	1690381-1690426	0	1.0
NZ_CP052091_2	2.2\|1160287\|46\|NZ_CP052091\|PILER-CR	1160287-1160332	46	NZ_CP049788	Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence	993393-993438	0	1.0
NZ_CP052091_2	2.2\|1160287\|46\|NZ_CP052091\|PILER-CR	1160287-1160332	46	NZ_CP021763	Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence	1154220-1154265	0	1.0
NZ_CP052091_2	2.2\|1160287\|46\|NZ_CP052091\|PILER-CR	1160287-1160332	46	NZ_CP015116	Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence	1329695-1329740	0	1.0
NZ_CP052091_2	2.2\|1160287\|46\|NZ_CP052091\|PILER-CR	1160287-1160332	46	NZ_CP049792	Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence	1465542-1465587	0	1.0
NZ_CP052091_2	2.2\|1160287\|46\|NZ_CP052091\|PILER-CR	1160287-1160332	46	NZ_CP016915	Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence	1576941-1576986	0	1.0
NZ_CP052091_2	2.2\|1160287\|46\|NZ_CP052091\|PILER-CR	1160287-1160332	46	NZ_CP022783	Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence	1072769-1072814	0	1.0
NZ_CP052091_2	2.2\|1160287\|46\|NZ_CP052091\|PILER-CR	1160287-1160332	46	NZ_CP022795	Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence	1069471-1069516	0	1.0
NZ_CP052091_2	2.2\|1160287\|46\|NZ_CP052091\|PILER-CR	1160287-1160332	46	NZ_CP022482	Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence	39022-39067	0	1.0
NZ_CP052091_2	2.2\|1160287\|46\|NZ_CP052091\|PILER-CR	1160287-1160332	46	NZ_CP009763	Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence	1045472-1045517	0	1.0
NZ_CP052091_2	2.2\|1160287\|46\|NZ_CP052091\|PILER-CR	1160287-1160332	46	CP023015	Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence	919903-919948	0	1.0
NZ_CP052091_2	2.2\|1160287\|46\|NZ_CP052091\|PILER-CR	1160287-1160332	46	NZ_CP052085	Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence	1132652-1132697	0	1.0
NZ_CP052091_2	2.2\|1160287\|46\|NZ_CP052091\|PILER-CR	1160287-1160332	46	NZ_CP052095	Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence	1160275-1160320	0	1.0
NZ_CP052091_2	2.2\|1160287\|46\|NZ_CP052091\|PILER-CR	1160287-1160332	46	NZ_CP021765	Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence	1154230-1154275	0	1.0
NZ_CP052091_2	2.2\|1160287\|46\|NZ_CP052091\|PILER-CR	1160287-1160332	46	NZ_CP052087	Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence	1132652-1132697	0	1.0
NZ_CP052091_2	2.2\|1160287\|46\|NZ_CP052091\|PILER-CR	1160287-1160332	46	NZ_CP052097	Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence	1160275-1160320	0	1.0
NZ_CP052091_2	2.2\|1160287\|46\|NZ_CP052091\|PILER-CR	1160287-1160332	46	NZ_CP052127	Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence	1132652-1132697	0	1.0
NZ_CP052091_2	2.2\|1160287\|46\|NZ_CP052091\|PILER-CR	1160287-1160332	46	NZ_CP052089	Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence	1132656-1132701	0	1.0
NZ_CP052091_2	2.2\|1160287\|46\|NZ_CP052091\|PILER-CR	1160287-1160332	46	NZ_CP052093	Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence	1160275-1160320	0	1.0
NZ_CP052091_2	2.2\|1160287\|46\|NZ_CP052091\|PILER-CR	1160287-1160332	46	NZ_CP052101	Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence	1160275-1160320	0	1.0
NZ_CP052091_2	2.2\|1160287\|46\|NZ_CP052091\|PILER-CR	1160287-1160332	46	NZ_CP052099	Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence	1160275-1160320	0	1.0
NZ_CP052091_2	2.2\|1160287\|46\|NZ_CP052091\|PILER-CR	1160287-1160332	46	NZ_CP052129	Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence	1024871-1024916	0	1.0
NZ_CP052091_2	2.2\|1160287\|46\|NZ_CP052091\|PILER-CR	1160287-1160332	46	NZ_CP052131	Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence	1132651-1132696	0	1.0
NZ_CP052091_2	2.2\|1160287\|46\|NZ_CP052091\|PILER-CR	1160287-1160332	46	CP011998	Ralstonia solanacearum strain YC45 plasmid, complete sequence	1036981-1037026	0	1.0
NZ_CP052091_2	2.2\|1160287\|46\|NZ_CP052091\|PILER-CR	1160287-1160332	46	NZ_CP052091	Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence	1160276-1160321	0	1.0
NZ_CP052091_2	2.2\|1160287\|46\|NZ_CP052091\|PILER-CR	1160287-1160332	46	NZ_CP052111	Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence	903237-903282	0	1.0
NZ_CP052091_2	2.2\|1160287\|46\|NZ_CP052091\|PILER-CR	1160287-1160332	46	NZ_CP052113	Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence	903237-903282	0	1.0
NZ_CP052091_3	3.1\|2051004\|23\|NZ_CP052091\|PILER-CR	2051004-2051026	23	NZ_CP021449	Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence	2063183-2063205	0	1.0
NZ_CP052091_3	3.1\|2051004\|23\|NZ_CP052091\|PILER-CR	2051004-2051026	23	NZ_CP049790	Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence	2017306-2017328	0	1.0
NZ_CP052091_3	3.1\|2051004\|23\|NZ_CP052091\|PILER-CR	2051004-2051026	23	NZ_CP049794	Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence	654550-654572	0	1.0
NZ_CP052091_3	3.1\|2051004\|23\|NZ_CP052091\|PILER-CR	2051004-2051026	23	NZ_CP049788	Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence	1938111-1938133	0	1.0
NZ_CP052091_3	3.1\|2051004\|23\|NZ_CP052091\|PILER-CR	2051004-2051026	23	NZ_CP021763	Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence	2092785-2092807	0	1.0
NZ_CP052091_3	3.1\|2051004\|23\|NZ_CP052091\|PILER-CR	2051004-2051026	23	NZ_CP015116	Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence	157321-157343	0	1.0
NZ_CP052091_3	3.1\|2051004\|23\|NZ_CP052091\|PILER-CR	2051004-2051026	23	NZ_CP049792	Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence	436026-436048	0	1.0
NZ_CP052091_3	3.1\|2051004\|23\|NZ_CP052091\|PILER-CR	2051004-2051026	23	NZ_CP016915	Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence	591934-591956	0	1.0
NZ_CP052091_3	3.1\|2051004\|23\|NZ_CP052091\|PILER-CR	2051004-2051026	23	NZ_CP025986	Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence	227286-227308	0	1.0
NZ_CP052091_3	3.1\|2051004\|23\|NZ_CP052091\|PILER-CR	2051004-2051026	23	NZ_CP009763	Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence	1934859-1934881	0	1.0
NZ_CP052091_3	3.1\|2051004\|23\|NZ_CP052091\|PILER-CR	2051004-2051026	23	NZ_CP052085	Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence	1972758-1972780	0	1.0
NZ_CP052091_3	3.1\|2051004\|23\|NZ_CP052091\|PILER-CR	2051004-2051026	23	NZ_CP052095	Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence	2050999-2051021	0	1.0
NZ_CP052091_3	3.1\|2051004\|23\|NZ_CP052091\|PILER-CR	2051004-2051026	23	NZ_CP021765	Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence	2092803-2092825	0	1.0
NZ_CP052091_3	3.1\|2051004\|23\|NZ_CP052091\|PILER-CR	2051004-2051026	23	NZ_CP052087	Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence	1973071-1973093	0	1.0
NZ_CP052091_3	3.1\|2051004\|23\|NZ_CP052091\|PILER-CR	2051004-2051026	23	NZ_CP052097	Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence	2050999-2051021	0	1.0
NZ_CP052091_3	3.1\|2051004\|23\|NZ_CP052091\|PILER-CR	2051004-2051026	23	NZ_CP052127	Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence	1972759-1972781	0	1.0
NZ_CP052091_3	3.1\|2051004\|23\|NZ_CP052091\|PILER-CR	2051004-2051026	23	NZ_CP052089	Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence	1971962-1971984	0	1.0
NZ_CP052091_3	3.1\|2051004\|23\|NZ_CP052091\|PILER-CR	2051004-2051026	23	NZ_CP052093	Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence	2050999-2051021	0	1.0
NZ_CP052091_3	3.1\|2051004\|23\|NZ_CP052091\|PILER-CR	2051004-2051026	23	NZ_CP052101	Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence	2050999-2051021	0	1.0
NZ_CP052091_3	3.1\|2051004\|23\|NZ_CP052091\|PILER-CR	2051004-2051026	23	NZ_CP052099	Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence	2050999-2051021	0	1.0
NZ_CP052091_3	3.1\|2051004\|23\|NZ_CP052091\|PILER-CR	2051004-2051026	23	NZ_CP052129	Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence	2048314-2048336	0	1.0
NZ_CP052091_3	3.1\|2051004\|23\|NZ_CP052091\|PILER-CR	2051004-2051026	23	NZ_CP052131	Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence	1973070-1973092	0	1.0
NZ_CP052091_3	3.1\|2051004\|23\|NZ_CP052091\|PILER-CR	2051004-2051026	23	CP011998	Ralstonia solanacearum strain YC45 plasmid, complete sequence	2006702-2006724	0	1.0
NZ_CP052091_3	3.1\|2051004\|23\|NZ_CP052091\|PILER-CR	2051004-2051026	23	NZ_CP052091	Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence	2051004-2051026	0	1.0
NZ_CP052091_3	3.1\|2051004\|23\|NZ_CP052091\|PILER-CR	2051004-2051026	23	NZ_CP052111	Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence	2131135-2131157	0	1.0
NZ_CP052091_3	3.1\|2051004\|23\|NZ_CP052091\|PILER-CR	2051004-2051026	23	NZ_CP052113	Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence	2131135-2131157	0	1.0
NZ_CP052091_2	2.1\|1160215\|35\|NZ_CP052091\|PILER-CR	1160215-1160249	35	NZ_CP021449	Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence	1370800-1370834	1	0.971
NZ_CP052091_2	2.1\|1160215\|35\|NZ_CP052091\|PILER-CR	1160215-1160249	35	NZ_CP022482	Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence	39094-39128	1	0.971
NZ_CP052091_2	2.1\|1160215\|35\|NZ_CP052091\|PILER-CR	1160215-1160249	35	CP011998	Ralstonia solanacearum strain YC45 plasmid, complete sequence	1037053-1037087	1	0.971
NZ_CP052091_2	2.1\|1160215\|35\|NZ_CP052091\|PILER-CR	1160215-1160249	35	NZ_CP021763	Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence	1154159-1154193	1	0.971
NZ_CP052091_2	2.1\|1160215\|35\|NZ_CP052091\|PILER-CR	1160215-1160249	35	NZ_CP021765	Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence	1154169-1154203	1	0.971
NZ_CP052091_2	2.2\|1160287\|46\|NZ_CP052091\|PILER-CR	1160287-1160332	46	NZ_CP052077	Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence	1044736-1044781	1	0.978
NZ_CP052091_2	2.2\|1160287\|46\|NZ_CP052091\|PILER-CR	1160287-1160332	46	NZ_CP052079	Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence	1044759-1044804	1	0.978
NZ_CP052091_2	2.2\|1160287\|46\|NZ_CP052091\|PILER-CR	1160287-1160332	46	NZ_CP052125	Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence	1044759-1044804	1	0.978
NZ_CP052091_2	2.2\|1160287\|46\|NZ_CP052091\|PILER-CR	1160287-1160332	46	NZ_CP052123	Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence	1044759-1044804	1	0.978
NZ_CP052091_2	2.2\|1160287\|46\|NZ_CP052091\|PILER-CR	1160287-1160332	46	NZ_CP052081	Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence	1044759-1044804	1	0.978
NZ_CP052091_2	2.2\|1160287\|46\|NZ_CP052091\|PILER-CR	1160287-1160332	46	NZ_CP052083	Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence	1044759-1044804	1	0.978
NZ_CP052091_3	3.1\|2051004\|23\|NZ_CP052091\|PILER-CR	2051004-2051026	23	NZ_CP016613	Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence	632929-632951	1	0.957
NZ_CP052091_3	3.1\|2051004\|23\|NZ_CP052091\|PILER-CR	2051004-2051026	23	CP023013	Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence	1995719-1995741	1	0.957
NZ_CP052091_3	3.1\|2051004\|23\|NZ_CP052091\|PILER-CR	2051004-2051026	23	NZ_CP022766	Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence	2060532-2060554	1	0.957
NZ_CP052091_3	3.1\|2051004\|23\|NZ_CP052091\|PILER-CR	2051004-2051026	23	NZ_CP052069	Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence	1997993-1998015	1	0.957
NZ_CP052091_3	3.1\|2051004\|23\|NZ_CP052091\|PILER-CR	2051004-2051026	23	NZ_CP016905	Ralstonia solanacearum strain KACC 10709 plasmid unnamed1	1033874-1033896	1	0.957
NZ_CP052091_3	3.1\|2051004\|23\|NZ_CP052091\|PILER-CR	2051004-2051026	23	NZ_CP022769	Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence	2068862-2068884	1	0.957
NZ_CP052091_3	3.1\|2051004\|23\|NZ_CP052091\|PILER-CR	2051004-2051026	23	NZ_CP015851	Ralstonia solanacearum strain YC40-M plasmid, complete sequence	401137-401159	1	0.957
NZ_CP052091_3	3.1\|2051004\|23\|NZ_CP052091\|PILER-CR	2051004-2051026	23	NZ_CP022773	Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence	1778487-1778509	1	0.957
NZ_CP052091_3	3.1\|2051004\|23\|NZ_CP052091\|PILER-CR	2051004-2051026	23	NZ_CP022783	Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence	2003541-2003563	1	0.957
NZ_CP052091_3	3.1\|2051004\|23\|NZ_CP052091\|PILER-CR	2051004-2051026	23	NZ_CP022791	Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence	2132122-2132144	1	0.957
NZ_CP052091_3	3.1\|2051004\|23\|NZ_CP052091\|PILER-CR	2051004-2051026	23	NZ_CP022795	Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence	1999231-1999253	1	0.957
NZ_CP052091_3	3.1\|2051004\|23\|NZ_CP052091\|PILER-CR	2051004-2051026	23	NZ_CP022482	Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence	1090488-1090510	1	0.957
NZ_CP052091_3	3.1\|2051004\|23\|NZ_CP052091\|PILER-CR	2051004-2051026	23	CP023015	Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence	1999049-1999071	1	0.957
NZ_CP052091_3	3.1\|2051004\|23\|NZ_CP052091\|PILER-CR	2051004-2051026	23	NZ_CP022779	Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence	2080332-2080354	1	0.957
NZ_CP052091_3	3.1\|2051004\|23\|NZ_CP052091\|PILER-CR	2051004-2051026	23	NZ_CP052077	Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence	1978534-1978556	1	0.957
NZ_CP052091_3	3.1\|2051004\|23\|NZ_CP052091\|PILER-CR	2051004-2051026	23	NZ_CP052079	Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence	1979183-1979205	1	0.957
NZ_CP052091_3	3.1\|2051004\|23\|NZ_CP052091\|PILER-CR	2051004-2051026	23	NZ_CP022781	Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence	2132183-2132205	1	0.957
NZ_CP052091_3	3.1\|2051004\|23\|NZ_CP052091\|PILER-CR	2051004-2051026	23	NZ_CP052125	Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence	1978559-1978581	1	0.957
NZ_CP052091_3	3.1\|2051004\|23\|NZ_CP052091\|PILER-CR	2051004-2051026	23	NZ_CP022793	Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence	1986432-1986454	1	0.957
NZ_CP052091_3	3.1\|2051004\|23\|NZ_CP052091\|PILER-CR	2051004-2051026	23	NZ_CP022785	Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence	1967063-1967085	1	0.957
NZ_CP052091_3	3.1\|2051004\|23\|NZ_CP052091\|PILER-CR	2051004-2051026	23	NZ_CP022787	Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence	2031141-2031163	1	0.957
NZ_CP052091_3	3.1\|2051004\|23\|NZ_CP052091\|PILER-CR	2051004-2051026	23	NZ_CP022756	Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence	2059262-2059284	1	0.957
NZ_CP052091_3	3.1\|2051004\|23\|NZ_CP052091\|PILER-CR	2051004-2051026	23	NZ_CP052123	Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence	1978559-1978581	1	0.957
NZ_CP052091_3	3.1\|2051004\|23\|NZ_CP052091\|PILER-CR	2051004-2051026	23	NZ_CP052081	Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence	1978559-1978581	1	0.957
NZ_CP052091_3	3.1\|2051004\|23\|NZ_CP052091\|PILER-CR	2051004-2051026	23	NZ_CP052083	Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence	1978559-1978581	1	0.957
NZ_CP052091_3	3.1\|2051004\|23\|NZ_CP052091\|PILER-CR	2051004-2051026	23	NZ_CP039340	Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence	921065-921087	2	0.913
NZ_CP052091_1	1.1\|446514\|82\|NZ_CP052091\|CRISPRCasFinder	446514-446595	82	NZ_CP049790	Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence	463710-463791	22	0.732
NZ_CP052091_1	1.1\|446514\|82\|NZ_CP052091\|CRISPRCasFinder	446514-446595	82	NZ_CP049794	Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence	187888-187969	22	0.732
NZ_CP052091_1	1.1\|446514\|82\|NZ_CP052091\|CRISPRCasFinder	446514-446595	82	NZ_CP049792	Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence	1983248-1983329	22	0.732
NZ_CP052091_1	1.1\|446514\|82\|NZ_CP052091\|CRISPRCasFinder	446514-446595	82	NZ_CP016915	Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence	1058512-1058593	22	0.732
NZ_CP052091_1	1.1\|446514\|82\|NZ_CP052091\|CRISPRCasFinder	446514-446595	82	NZ_CP052085	Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence	462168-462249	22	0.732
NZ_CP052091_1	1.1\|446514\|82\|NZ_CP052091\|CRISPRCasFinder	446514-446595	82	NZ_CP052095	Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence	446512-446593	22	0.732
NZ_CP052091_1	1.1\|446514\|82\|NZ_CP052091\|CRISPRCasFinder	446514-446595	82	NZ_CP052087	Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence	462168-462249	22	0.732
NZ_CP052091_1	1.1\|446514\|82\|NZ_CP052091\|CRISPRCasFinder	446514-446595	82	NZ_CP052097	Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence	446512-446593	22	0.732
NZ_CP052091_1	1.1\|446514\|82\|NZ_CP052091\|CRISPRCasFinder	446514-446595	82	NZ_CP052127	Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence	462168-462249	22	0.732
NZ_CP052091_1	1.1\|446514\|82\|NZ_CP052091\|CRISPRCasFinder	446514-446595	82	NZ_CP052089	Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence	462172-462253	22	0.732
NZ_CP052091_1	1.1\|446514\|82\|NZ_CP052091\|CRISPRCasFinder	446514-446595	82	NZ_CP052093	Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence	446512-446593	22	0.732
NZ_CP052091_1	1.1\|446514\|82\|NZ_CP052091\|CRISPRCasFinder	446514-446595	82	NZ_CP052101	Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence	446512-446593	22	0.732
NZ_CP052091_1	1.1\|446514\|82\|NZ_CP052091\|CRISPRCasFinder	446514-446595	82	NZ_CP052099	Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence	446512-446593	22	0.732
NZ_CP052091_1	1.1\|446514\|82\|NZ_CP052091\|CRISPRCasFinder	446514-446595	82	NZ_CP052129	Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence	445023-445104	22	0.732
NZ_CP052091_1	1.1\|446514\|82\|NZ_CP052091\|CRISPRCasFinder	446514-446595	82	NZ_CP052131	Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence	462168-462249	22	0.732
NZ_CP052091_1	1.1\|446514\|82\|NZ_CP052091\|CRISPRCasFinder	446514-446595	82	NZ_CP052091	Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence	446514-446595	22	0.732
NZ_CP052091_1	1.1\|446514\|82\|NZ_CP052091\|CRISPRCasFinder	446514-446595	82	NZ_CP021449	Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence	1611874-1611955	23	0.72
NZ_CP052091_1	1.1\|446514\|82\|NZ_CP052091\|CRISPRCasFinder	446514-446595	82	CP023013	Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence	445694-445775	23	0.72
NZ_CP052091_1	1.1\|446514\|82\|NZ_CP052091\|CRISPRCasFinder	446514-446595	82	NZ_CP049788	Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence	1491994-1492075	23	0.72
NZ_CP052091_1	1.1\|446514\|82\|NZ_CP052091\|CRISPRCasFinder	446514-446595	82	NZ_CP022766	Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence	448628-448709	23	0.72
NZ_CP052091_1	1.1\|446514\|82\|NZ_CP052091\|CRISPRCasFinder	446514-446595	82	NZ_CP021763	Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence	508864-508945	23	0.72
NZ_CP052091_1	1.1\|446514\|82\|NZ_CP052091\|CRISPRCasFinder	446514-446595	82	NZ_CP015116	Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence	599860-599941	23	0.72
NZ_CP052091_1	1.1\|446514\|82\|NZ_CP052091\|CRISPRCasFinder	446514-446595	82	NZ_CP016905	Ralstonia solanacearum strain KACC 10709 plasmid unnamed1	1443886-1443967	23	0.72
NZ_CP052091_1	1.1\|446514\|82\|NZ_CP052091\|CRISPRCasFinder	446514-446595	82	NZ_CP025986	Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence	677317-677398	23	0.72
NZ_CP052091_1	1.1\|446514\|82\|NZ_CP052091\|CRISPRCasFinder	446514-446595	82	NZ_CP022769	Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence	449889-449970	23	0.72
NZ_CP052091_1	1.1\|446514\|82\|NZ_CP052091\|CRISPRCasFinder	446514-446595	82	NZ_CP015851	Ralstonia solanacearum strain YC40-M plasmid, complete sequence	1730838-1730919	23	0.72
NZ_CP052091_1	1.1\|446514\|82\|NZ_CP052091\|CRISPRCasFinder	446514-446595	82	NZ_CP022773	Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence	461363-461444	23	0.72
NZ_CP052091_1	1.1\|446514\|82\|NZ_CP052091\|CRISPRCasFinder	446514-446595	82	NZ_CP022783	Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence	447095-447176	23	0.72
NZ_CP052091_1	1.1\|446514\|82\|NZ_CP052091\|CRISPRCasFinder	446514-446595	82	NZ_CP022791	Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence	342766-342847	23	0.72
NZ_CP052091_1	1.1\|446514\|82\|NZ_CP052091\|CRISPRCasFinder	446514-446595	82	NZ_CP022795	Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence	446186-446267	23	0.72
NZ_CP052091_1	1.1\|446514\|82\|NZ_CP052091\|CRISPRCasFinder	446514-446595	82	NZ_CP009763	Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence	440751-440832	23	0.72
NZ_CP052091_1	1.1\|446514\|82\|NZ_CP052091\|CRISPRCasFinder	446514-446595	82	CP023015	Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence	446840-446921	23	0.72
NZ_CP052091_1	1.1\|446514\|82\|NZ_CP052091\|CRISPRCasFinder	446514-446595	82	NZ_CP022779	Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence	449907-449988	23	0.72
NZ_CP052091_1	1.1\|446514\|82\|NZ_CP052091\|CRISPRCasFinder	446514-446595	82	NZ_CP052077	Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence	442938-443019	23	0.72
NZ_CP052091_1	1.1\|446514\|82\|NZ_CP052091\|CRISPRCasFinder	446514-446595	82	NZ_CP052079	Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence	442941-443022	23	0.72
NZ_CP052091_1	1.1\|446514\|82\|NZ_CP052091\|CRISPRCasFinder	446514-446595	82	NZ_CP022781	Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence	1647938-1648019	23	0.72
NZ_CP052091_1	1.1\|446514\|82\|NZ_CP052091\|CRISPRCasFinder	446514-446595	82	NZ_CP052125	Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence	442941-443022	23	0.72
NZ_CP052091_1	1.1\|446514\|82\|NZ_CP052091\|CRISPRCasFinder	446514-446595	82	NZ_CP022793	Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence	461344-461425	23	0.72
NZ_CP052091_1	1.1\|446514\|82\|NZ_CP052091\|CRISPRCasFinder	446514-446595	82	NZ_CP022785	Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence	461302-461383	23	0.72
NZ_CP052091_1	1.1\|446514\|82\|NZ_CP052091\|CRISPRCasFinder	446514-446595	82	NZ_CP022787	Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence	453508-453589	23	0.72
NZ_CP052091_1	1.1\|446514\|82\|NZ_CP052091\|CRISPRCasFinder	446514-446595	82	NZ_CP022756	Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence	453121-453202	23	0.72
NZ_CP052091_1	1.1\|446514\|82\|NZ_CP052091\|CRISPRCasFinder	446514-446595	82	NZ_CP052123	Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence	442941-443022	23	0.72
NZ_CP052091_1	1.1\|446514\|82\|NZ_CP052091\|CRISPRCasFinder	446514-446595	82	CP011998	Ralstonia solanacearum strain YC45 plasmid, complete sequence	506118-506199	23	0.72
NZ_CP052091_1	1.1\|446514\|82\|NZ_CP052091\|CRISPRCasFinder	446514-446595	82	NZ_CP052081	Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence	442941-443022	23	0.72
NZ_CP052091_1	1.1\|446514\|82\|NZ_CP052091\|CRISPRCasFinder	446514-446595	82	NZ_CP052083	Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence	442941-443022	23	0.72
NZ_CP052091_1	1.1\|446514\|82\|NZ_CP052091\|CRISPRCasFinder	446514-446595	82	NZ_CP052111	Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence	1630007-1630088	23	0.72
NZ_CP052091_1	1.1\|446514\|82\|NZ_CP052091\|CRISPRCasFinder	446514-446595	82	NZ_CP052113	Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence	1630007-1630088	23	0.72

1. spacer 2.1|1160215|35|NZ_CP052091|PILER-CR matches to NZ_CP049790 (Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcgctatg	Protospacer
***********************************

2. spacer 2.1|1160215|35|NZ_CP052091|PILER-CR matches to NZ_CP016915 (Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcgctatg	Protospacer
***********************************

3. spacer 2.1|1160215|35|NZ_CP052091|PILER-CR matches to CP023015 (Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcgctatg	Protospacer
***********************************

4. spacer 2.1|1160215|35|NZ_CP052091|PILER-CR matches to NZ_CP052129 (Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcgctatg	Protospacer
***********************************

5. spacer 2.1|1160215|35|NZ_CP052091|PILER-CR matches to NZ_CP052111 (Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcgctatg	Protospacer
***********************************

6. spacer 2.1|1160215|35|NZ_CP052091|PILER-CR matches to NZ_CP052113 (Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcgctatg	Protospacer
***********************************

7. spacer 2.1|1160215|35|NZ_CP052091|PILER-CR matches to CP023013 (Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcgctatg	Protospacer
***********************************

8. spacer 2.1|1160215|35|NZ_CP052091|PILER-CR matches to NZ_CP049794 (Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcgctatg	Protospacer
***********************************

9. spacer 2.1|1160215|35|NZ_CP052091|PILER-CR matches to NZ_CP049788 (Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcgctatg	Protospacer
***********************************

10. spacer 2.1|1160215|35|NZ_CP052091|PILER-CR matches to NZ_CP015116 (Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcgctatg	Protospacer
***********************************

11. spacer 2.1|1160215|35|NZ_CP052091|PILER-CR matches to NZ_CP049792 (Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcgctatg	Protospacer
***********************************

12. spacer 2.1|1160215|35|NZ_CP052091|PILER-CR matches to NZ_CP022783 (Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcgctatg	Protospacer
***********************************

13. spacer 2.1|1160215|35|NZ_CP052091|PILER-CR matches to NZ_CP022795 (Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcgctatg	Protospacer
***********************************

14. spacer 2.1|1160215|35|NZ_CP052091|PILER-CR matches to NZ_CP009763 (Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcgctatg	Protospacer
***********************************

15. spacer 2.1|1160215|35|NZ_CP052091|PILER-CR matches to NZ_CP052085 (Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcgctatg	Protospacer
***********************************

16. spacer 2.1|1160215|35|NZ_CP052091|PILER-CR matches to NZ_CP052095 (Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcgctatg	Protospacer
***********************************

17. spacer 2.1|1160215|35|NZ_CP052091|PILER-CR matches to NZ_CP052077 (Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcgctatg	Protospacer
***********************************

18. spacer 2.1|1160215|35|NZ_CP052091|PILER-CR matches to NZ_CP052087 (Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcgctatg	Protospacer
***********************************

19. spacer 2.1|1160215|35|NZ_CP052091|PILER-CR matches to NZ_CP052097 (Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcgctatg	Protospacer
***********************************

20. spacer 2.1|1160215|35|NZ_CP052091|PILER-CR matches to NZ_CP052127 (Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcgctatg	Protospacer
***********************************

21. spacer 2.1|1160215|35|NZ_CP052091|PILER-CR matches to NZ_CP052079 (Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcgctatg	Protospacer
***********************************

22. spacer 2.1|1160215|35|NZ_CP052091|PILER-CR matches to NZ_CP052089 (Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcgctatg	Protospacer
***********************************

23. spacer 2.1|1160215|35|NZ_CP052091|PILER-CR matches to NZ_CP052093 (Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcgctatg	Protospacer
***********************************

24. spacer 2.1|1160215|35|NZ_CP052091|PILER-CR matches to NZ_CP052101 (Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcgctatg	Protospacer
***********************************

25. spacer 2.1|1160215|35|NZ_CP052091|PILER-CR matches to NZ_CP052099 (Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcgctatg	Protospacer
***********************************

26. spacer 2.1|1160215|35|NZ_CP052091|PILER-CR matches to NZ_CP052125 (Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcgctatg	Protospacer
***********************************

27. spacer 2.1|1160215|35|NZ_CP052091|PILER-CR matches to NZ_CP052123 (Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcgctatg	Protospacer
***********************************

28. spacer 2.1|1160215|35|NZ_CP052091|PILER-CR matches to NZ_CP052131 (Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcgctatg	Protospacer
***********************************

29. spacer 2.1|1160215|35|NZ_CP052091|PILER-CR matches to NZ_CP052081 (Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcgctatg	Protospacer
***********************************

30. spacer 2.1|1160215|35|NZ_CP052091|PILER-CR matches to NZ_CP052083 (Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcgctatg	Protospacer
***********************************

31. spacer 2.1|1160215|35|NZ_CP052091|PILER-CR matches to NZ_CP052091 (Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcgctatg	Protospacer
***********************************

32. spacer 2.2|1160287|46|NZ_CP052091|PILER-CR matches to NZ_CP021449 (Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence) position: , mismatch: 0, identity: 1.0

tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
**********************************************

33. spacer 2.2|1160287|46|NZ_CP052091|PILER-CR matches to CP023013 (Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
**********************************************

34. spacer 2.2|1160287|46|NZ_CP052091|PILER-CR matches to NZ_CP049790 (Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
**********************************************

35. spacer 2.2|1160287|46|NZ_CP052091|PILER-CR matches to NZ_CP049794 (Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
**********************************************

36. spacer 2.2|1160287|46|NZ_CP052091|PILER-CR matches to NZ_CP049788 (Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
**********************************************

37. spacer 2.2|1160287|46|NZ_CP052091|PILER-CR matches to NZ_CP021763 (Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
**********************************************

38. spacer 2.2|1160287|46|NZ_CP052091|PILER-CR matches to NZ_CP015116 (Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
**********************************************

39. spacer 2.2|1160287|46|NZ_CP052091|PILER-CR matches to NZ_CP049792 (Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
**********************************************

40. spacer 2.2|1160287|46|NZ_CP052091|PILER-CR matches to NZ_CP016915 (Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
**********************************************

41. spacer 2.2|1160287|46|NZ_CP052091|PILER-CR matches to NZ_CP022783 (Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
**********************************************

42. spacer 2.2|1160287|46|NZ_CP052091|PILER-CR matches to NZ_CP022795 (Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
**********************************************

43. spacer 2.2|1160287|46|NZ_CP052091|PILER-CR matches to NZ_CP022482 (Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence) position: , mismatch: 0, identity: 1.0

tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
**********************************************

44. spacer 2.2|1160287|46|NZ_CP052091|PILER-CR matches to NZ_CP009763 (Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
**********************************************

45. spacer 2.2|1160287|46|NZ_CP052091|PILER-CR matches to CP023015 (Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
**********************************************

46. spacer 2.2|1160287|46|NZ_CP052091|PILER-CR matches to NZ_CP052085 (Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
**********************************************

47. spacer 2.2|1160287|46|NZ_CP052091|PILER-CR matches to NZ_CP052095 (Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
**********************************************

48. spacer 2.2|1160287|46|NZ_CP052091|PILER-CR matches to NZ_CP021765 (Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
**********************************************

49. spacer 2.2|1160287|46|NZ_CP052091|PILER-CR matches to NZ_CP052087 (Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
**********************************************

50. spacer 2.2|1160287|46|NZ_CP052091|PILER-CR matches to NZ_CP052097 (Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
**********************************************

51. spacer 2.2|1160287|46|NZ_CP052091|PILER-CR matches to NZ_CP052127 (Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
**********************************************

52. spacer 2.2|1160287|46|NZ_CP052091|PILER-CR matches to NZ_CP052089 (Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
**********************************************

53. spacer 2.2|1160287|46|NZ_CP052091|PILER-CR matches to NZ_CP052093 (Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
**********************************************

54. spacer 2.2|1160287|46|NZ_CP052091|PILER-CR matches to NZ_CP052101 (Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
**********************************************

55. spacer 2.2|1160287|46|NZ_CP052091|PILER-CR matches to NZ_CP052099 (Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
**********************************************

56. spacer 2.2|1160287|46|NZ_CP052091|PILER-CR matches to NZ_CP052129 (Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
**********************************************

57. spacer 2.2|1160287|46|NZ_CP052091|PILER-CR matches to NZ_CP052131 (Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
**********************************************

58. spacer 2.2|1160287|46|NZ_CP052091|PILER-CR matches to CP011998 (Ralstonia solanacearum strain YC45 plasmid, complete sequence) position: , mismatch: 0, identity: 1.0

tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
**********************************************

59. spacer 2.2|1160287|46|NZ_CP052091|PILER-CR matches to NZ_CP052091 (Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
**********************************************

60. spacer 2.2|1160287|46|NZ_CP052091|PILER-CR matches to NZ_CP052111 (Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
**********************************************

61. spacer 2.2|1160287|46|NZ_CP052091|PILER-CR matches to NZ_CP052113 (Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
**********************************************

62. spacer 3.1|2051004|23|NZ_CP052091|PILER-CR matches to NZ_CP021449 (Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence) position: , mismatch: 0, identity: 1.0

cgattttggcgacgccccattca	CRISPR spacer
cgattttggcgacgccccattca	Protospacer
***********************

63. spacer 3.1|2051004|23|NZ_CP052091|PILER-CR matches to NZ_CP049790 (Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

cgattttggcgacgccccattca	CRISPR spacer
cgattttggcgacgccccattca	Protospacer
***********************

64. spacer 3.1|2051004|23|NZ_CP052091|PILER-CR matches to NZ_CP049794 (Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

cgattttggcgacgccccattca	CRISPR spacer
cgattttggcgacgccccattca	Protospacer
***********************

65. spacer 3.1|2051004|23|NZ_CP052091|PILER-CR matches to NZ_CP049788 (Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

cgattttggcgacgccccattca	CRISPR spacer
cgattttggcgacgccccattca	Protospacer
***********************

66. spacer 3.1|2051004|23|NZ_CP052091|PILER-CR matches to NZ_CP021763 (Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

cgattttggcgacgccccattca	CRISPR spacer
cgattttggcgacgccccattca	Protospacer
***********************

67. spacer 3.1|2051004|23|NZ_CP052091|PILER-CR matches to NZ_CP015116 (Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

cgattttggcgacgccccattca	CRISPR spacer
cgattttggcgacgccccattca	Protospacer
***********************

68. spacer 3.1|2051004|23|NZ_CP052091|PILER-CR matches to NZ_CP049792 (Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

cgattttggcgacgccccattca	CRISPR spacer
cgattttggcgacgccccattca	Protospacer
***********************

69. spacer 3.1|2051004|23|NZ_CP052091|PILER-CR matches to NZ_CP016915 (Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

cgattttggcgacgccccattca	CRISPR spacer
cgattttggcgacgccccattca	Protospacer
***********************

70. spacer 3.1|2051004|23|NZ_CP052091|PILER-CR matches to NZ_CP025986 (Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence) position: , mismatch: 0, identity: 1.0

cgattttggcgacgccccattca	CRISPR spacer
cgattttggcgacgccccattca	Protospacer
***********************

71. spacer 3.1|2051004|23|NZ_CP052091|PILER-CR matches to NZ_CP009763 (Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

cgattttggcgacgccccattca	CRISPR spacer
cgattttggcgacgccccattca	Protospacer
***********************

72. spacer 3.1|2051004|23|NZ_CP052091|PILER-CR matches to NZ_CP052085 (Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

cgattttggcgacgccccattca	CRISPR spacer
cgattttggcgacgccccattca	Protospacer
***********************

73. spacer 3.1|2051004|23|NZ_CP052091|PILER-CR matches to NZ_CP052095 (Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

cgattttggcgacgccccattca	CRISPR spacer
cgattttggcgacgccccattca	Protospacer
***********************

74. spacer 3.1|2051004|23|NZ_CP052091|PILER-CR matches to NZ_CP021765 (Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

cgattttggcgacgccccattca	CRISPR spacer
cgattttggcgacgccccattca	Protospacer
***********************

75. spacer 3.1|2051004|23|NZ_CP052091|PILER-CR matches to NZ_CP052087 (Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

cgattttggcgacgccccattca	CRISPR spacer
cgattttggcgacgccccattca	Protospacer
***********************

76. spacer 3.1|2051004|23|NZ_CP052091|PILER-CR matches to NZ_CP052097 (Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

cgattttggcgacgccccattca	CRISPR spacer
cgattttggcgacgccccattca	Protospacer
***********************

77. spacer 3.1|2051004|23|NZ_CP052091|PILER-CR matches to NZ_CP052127 (Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

cgattttggcgacgccccattca	CRISPR spacer
cgattttggcgacgccccattca	Protospacer
***********************

78. spacer 3.1|2051004|23|NZ_CP052091|PILER-CR matches to NZ_CP052089 (Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

cgattttggcgacgccccattca	CRISPR spacer
cgattttggcgacgccccattca	Protospacer
***********************

79. spacer 3.1|2051004|23|NZ_CP052091|PILER-CR matches to NZ_CP052093 (Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

cgattttggcgacgccccattca	CRISPR spacer
cgattttggcgacgccccattca	Protospacer
***********************

80. spacer 3.1|2051004|23|NZ_CP052091|PILER-CR matches to NZ_CP052101 (Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

cgattttggcgacgccccattca	CRISPR spacer
cgattttggcgacgccccattca	Protospacer
***********************

81. spacer 3.1|2051004|23|NZ_CP052091|PILER-CR matches to NZ_CP052099 (Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

cgattttggcgacgccccattca	CRISPR spacer
cgattttggcgacgccccattca	Protospacer
***********************

82. spacer 3.1|2051004|23|NZ_CP052091|PILER-CR matches to NZ_CP052129 (Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

cgattttggcgacgccccattca	CRISPR spacer
cgattttggcgacgccccattca	Protospacer
***********************

83. spacer 3.1|2051004|23|NZ_CP052091|PILER-CR matches to NZ_CP052131 (Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

cgattttggcgacgccccattca	CRISPR spacer
cgattttggcgacgccccattca	Protospacer
***********************

84. spacer 3.1|2051004|23|NZ_CP052091|PILER-CR matches to CP011998 (Ralstonia solanacearum strain YC45 plasmid, complete sequence) position: , mismatch: 0, identity: 1.0

cgattttggcgacgccccattca	CRISPR spacer
cgattttggcgacgccccattca	Protospacer
***********************

85. spacer 3.1|2051004|23|NZ_CP052091|PILER-CR matches to NZ_CP052091 (Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

cgattttggcgacgccccattca	CRISPR spacer
cgattttggcgacgccccattca	Protospacer
***********************

86. spacer 3.1|2051004|23|NZ_CP052091|PILER-CR matches to NZ_CP052111 (Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

cgattttggcgacgccccattca	CRISPR spacer
cgattttggcgacgccccattca	Protospacer
***********************

87. spacer 3.1|2051004|23|NZ_CP052091|PILER-CR matches to NZ_CP052113 (Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

cgattttggcgacgccccattca	CRISPR spacer
cgattttggcgacgccccattca	Protospacer
***********************

88. spacer 2.1|1160215|35|NZ_CP052091|PILER-CR matches to NZ_CP021449 (Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence) position: , mismatch: 1, identity: 0.971

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcggtatg	Protospacer
****************************** ****

89. spacer 2.1|1160215|35|NZ_CP052091|PILER-CR matches to NZ_CP022482 (Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence) position: , mismatch: 1, identity: 0.971

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcggtatg	Protospacer
****************************** ****

90. spacer 2.1|1160215|35|NZ_CP052091|PILER-CR matches to CP011998 (Ralstonia solanacearum strain YC45 plasmid, complete sequence) position: , mismatch: 1, identity: 0.971

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcggtatg	Protospacer
****************************** ****

91. spacer 2.1|1160215|35|NZ_CP052091|PILER-CR matches to NZ_CP021763 (Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.971

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcggtatg	Protospacer
****************************** ****

92. spacer 2.1|1160215|35|NZ_CP052091|PILER-CR matches to NZ_CP021765 (Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.971

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcggtatg	Protospacer
****************************** ****

93. spacer 2.2|1160287|46|NZ_CP052091|PILER-CR matches to NZ_CP052077 (Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence) position: , mismatch: 1, identity: 0.978

tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagtctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
******.***************************************

94. spacer 2.2|1160287|46|NZ_CP052091|PILER-CR matches to NZ_CP052079 (Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence) position: , mismatch: 1, identity: 0.978

tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagtctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
******.***************************************

95. spacer 2.2|1160287|46|NZ_CP052091|PILER-CR matches to NZ_CP052125 (Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence) position: , mismatch: 1, identity: 0.978

tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagtctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
******.***************************************

96. spacer 2.2|1160287|46|NZ_CP052091|PILER-CR matches to NZ_CP052123 (Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence) position: , mismatch: 1, identity: 0.978

tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagtctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
******.***************************************

97. spacer 2.2|1160287|46|NZ_CP052091|PILER-CR matches to NZ_CP052081 (Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence) position: , mismatch: 1, identity: 0.978

tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagtctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
******.***************************************

98. spacer 2.2|1160287|46|NZ_CP052091|PILER-CR matches to NZ_CP052083 (Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence) position: , mismatch: 1, identity: 0.978

tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagtctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
******.***************************************

99. spacer 3.1|2051004|23|NZ_CP052091|PILER-CR matches to NZ_CP016613 (Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.957

cgattttggcgacgccccattca	CRISPR spacer
cgattttggcgacgccctattca	Protospacer
*****************.*****

100. spacer 3.1|2051004|23|NZ_CP052091|PILER-CR matches to CP023013 (Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.957

cgattttggcgacgccccattca	CRISPR spacer
cgattttggcgacgccctattca	Protospacer
*****************.*****

101. spacer 3.1|2051004|23|NZ_CP052091|PILER-CR matches to NZ_CP022766 (Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.957

cgattttggcgacgccccattca	CRISPR spacer
cgattttggcgacgccctattca	Protospacer
*****************.*****

102. spacer 3.1|2051004|23|NZ_CP052091|PILER-CR matches to NZ_CP052069 (Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence) position: , mismatch: 1, identity: 0.957

cgattttggcgacgccccattca	CRISPR spacer
cgattttggcgacgccctattca	Protospacer
*****************.*****

103. spacer 3.1|2051004|23|NZ_CP052091|PILER-CR matches to NZ_CP016905 (Ralstonia solanacearum strain KACC 10709 plasmid unnamed1) position: , mismatch: 1, identity: 0.957

cgattttggcgacgccccattca	CRISPR spacer
cgattttggcgacgccctattca	Protospacer
*****************.*****

104. spacer 3.1|2051004|23|NZ_CP052091|PILER-CR matches to NZ_CP022769 (Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.957

cgattttggcgacgccccattca	CRISPR spacer
cgattttggcgacgccctattca	Protospacer
*****************.*****

105. spacer 3.1|2051004|23|NZ_CP052091|PILER-CR matches to NZ_CP015851 (Ralstonia solanacearum strain YC40-M plasmid, complete sequence) position: , mismatch: 1, identity: 0.957

cgattttggcgacgccccattca	CRISPR spacer
cgattttggcgacgccctattca	Protospacer
*****************.*****

106. spacer 3.1|2051004|23|NZ_CP052091|PILER-CR matches to NZ_CP022773 (Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.957

cgattttggcgacgccccattca	CRISPR spacer
cgattttggcgacgccctattca	Protospacer
*****************.*****

107. spacer 3.1|2051004|23|NZ_CP052091|PILER-CR matches to NZ_CP022783 (Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.957

cgattttggcgacgccccattca	CRISPR spacer
cgattttggcgacgccctattca	Protospacer
*****************.*****

108. spacer 3.1|2051004|23|NZ_CP052091|PILER-CR matches to NZ_CP022791 (Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.957

cgattttggcgacgccccattca	CRISPR spacer
cgattttggcgacgccctattca	Protospacer
*****************.*****

109. spacer 3.1|2051004|23|NZ_CP052091|PILER-CR matches to NZ_CP022795 (Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.957

cgattttggcgacgccccattca	CRISPR spacer
cgattttggcgacgccctattca	Protospacer
*****************.*****

110. spacer 3.1|2051004|23|NZ_CP052091|PILER-CR matches to NZ_CP022482 (Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence) position: , mismatch: 1, identity: 0.957

cgattttggcgacgccccattca	CRISPR spacer
cgattttggcgacgccctattca	Protospacer
*****************.*****

111. spacer 3.1|2051004|23|NZ_CP052091|PILER-CR matches to CP023015 (Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.957

cgattttggcgacgccccattca	CRISPR spacer
cgattttggcgacgccctattca	Protospacer
*****************.*****

112. spacer 3.1|2051004|23|NZ_CP052091|PILER-CR matches to NZ_CP022779 (Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.957

cgattttggcgacgccccattca	CRISPR spacer
cgattttggcgacgccctattca	Protospacer
*****************.*****

113. spacer 3.1|2051004|23|NZ_CP052091|PILER-CR matches to NZ_CP052077 (Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence) position: , mismatch: 1, identity: 0.957

cgattttggcgacgccccattca	CRISPR spacer
cgattttggcgacgccctattca	Protospacer
*****************.*****

114. spacer 3.1|2051004|23|NZ_CP052091|PILER-CR matches to NZ_CP052079 (Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence) position: , mismatch: 1, identity: 0.957

cgattttggcgacgccccattca	CRISPR spacer
cgattttggcgacgccctattca	Protospacer
*****************.*****

115. spacer 3.1|2051004|23|NZ_CP052091|PILER-CR matches to NZ_CP022781 (Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.957

cgattttggcgacgccccattca	CRISPR spacer
cgattttggcgacgccctattca	Protospacer
*****************.*****

116. spacer 3.1|2051004|23|NZ_CP052091|PILER-CR matches to NZ_CP052125 (Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence) position: , mismatch: 1, identity: 0.957

cgattttggcgacgccccattca	CRISPR spacer
cgattttggcgacgccctattca	Protospacer
*****************.*****

117. spacer 3.1|2051004|23|NZ_CP052091|PILER-CR matches to NZ_CP022793 (Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.957

cgattttggcgacgccccattca	CRISPR spacer
cgattttggcgacgccctattca	Protospacer
*****************.*****

118. spacer 3.1|2051004|23|NZ_CP052091|PILER-CR matches to NZ_CP022785 (Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.957

cgattttggcgacgccccattca	CRISPR spacer
cgattttggcgacgccctattca	Protospacer
*****************.*****

119. spacer 3.1|2051004|23|NZ_CP052091|PILER-CR matches to NZ_CP022787 (Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.957

cgattttggcgacgccccattca	CRISPR spacer
cgattttggcgacgccctattca	Protospacer
*****************.*****

120. spacer 3.1|2051004|23|NZ_CP052091|PILER-CR matches to NZ_CP022756 (Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.957

cgattttggcgacgccccattca	CRISPR spacer
cgattttggcgacgccctattca	Protospacer
*****************.*****

121. spacer 3.1|2051004|23|NZ_CP052091|PILER-CR matches to NZ_CP052123 (Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence) position: , mismatch: 1, identity: 0.957

cgattttggcgacgccccattca	CRISPR spacer
cgattttggcgacgccctattca	Protospacer
*****************.*****

122. spacer 3.1|2051004|23|NZ_CP052091|PILER-CR matches to NZ_CP052081 (Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence) position: , mismatch: 1, identity: 0.957

cgattttggcgacgccccattca	CRISPR spacer
cgattttggcgacgccctattca	Protospacer
*****************.*****

123. spacer 3.1|2051004|23|NZ_CP052091|PILER-CR matches to NZ_CP052083 (Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence) position: , mismatch: 1, identity: 0.957

cgattttggcgacgccccattca	CRISPR spacer
cgattttggcgacgccctattca	Protospacer
*****************.*****

124. spacer 3.1|2051004|23|NZ_CP052091|PILER-CR matches to NZ_CP039340 (Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence) position: , mismatch: 2, identity: 0.913

cgattttggcgacgccccattca	CRISPR spacer
cgattttggcgacgccctattcc	Protospacer
*****************.****

125. spacer 1.1|446514|82|NZ_CP052091|CRISPRCasFinder matches to NZ_CP049790 (Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence) position: , mismatch: 22, identity: 0.732

cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcag	CRISPR spacer
cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcag	Protospacer
************************************************************

126. spacer 1.1|446514|82|NZ_CP052091|CRISPRCasFinder matches to NZ_CP049794 (Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence) position: , mismatch: 22, identity: 0.732

cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcag	CRISPR spacer
cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcag	Protospacer
************************************************************

127. spacer 1.1|446514|82|NZ_CP052091|CRISPRCasFinder matches to NZ_CP049792 (Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence) position: , mismatch: 22, identity: 0.732

cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcag	CRISPR spacer
cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcag	Protospacer
************************************************************

128. spacer 1.1|446514|82|NZ_CP052091|CRISPRCasFinder matches to NZ_CP016915 (Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence) position: , mismatch: 22, identity: 0.732

cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcag	CRISPR spacer
cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcag	Protospacer
************************************************************

129. spacer 1.1|446514|82|NZ_CP052091|CRISPRCasFinder matches to NZ_CP052085 (Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence) position: , mismatch: 22, identity: 0.732

cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcag	CRISPR spacer
cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcag	Protospacer
************************************************************

130. spacer 1.1|446514|82|NZ_CP052091|CRISPRCasFinder matches to NZ_CP052095 (Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence) position: , mismatch: 22, identity: 0.732

cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcag	CRISPR spacer
cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcag	Protospacer
************************************************************

131. spacer 1.1|446514|82|NZ_CP052091|CRISPRCasFinder matches to NZ_CP052087 (Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence) position: , mismatch: 22, identity: 0.732

cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcag	CRISPR spacer
cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcag	Protospacer
************************************************************

132. spacer 1.1|446514|82|NZ_CP052091|CRISPRCasFinder matches to NZ_CP052097 (Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence) position: , mismatch: 22, identity: 0.732

cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcag	CRISPR spacer
cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcag	Protospacer
************************************************************

133. spacer 1.1|446514|82|NZ_CP052091|CRISPRCasFinder matches to NZ_CP052127 (Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence) position: , mismatch: 22, identity: 0.732

cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcag	CRISPR spacer
cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcag	Protospacer
************************************************************

134. spacer 1.1|446514|82|NZ_CP052091|CRISPRCasFinder matches to NZ_CP052089 (Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence) position: , mismatch: 22, identity: 0.732

cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcag	CRISPR spacer
cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcag	Protospacer
************************************************************

135. spacer 1.1|446514|82|NZ_CP052091|CRISPRCasFinder matches to NZ_CP052093 (Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence) position: , mismatch: 22, identity: 0.732

cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcag	CRISPR spacer
cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcag	Protospacer
************************************************************

136. spacer 1.1|446514|82|NZ_CP052091|CRISPRCasFinder matches to NZ_CP052101 (Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence) position: , mismatch: 22, identity: 0.732

cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcag	CRISPR spacer
cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcag	Protospacer
************************************************************

137. spacer 1.1|446514|82|NZ_CP052091|CRISPRCasFinder matches to NZ_CP052099 (Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence) position: , mismatch: 22, identity: 0.732

cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcag	CRISPR spacer
cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcag	Protospacer
************************************************************

138. spacer 1.1|446514|82|NZ_CP052091|CRISPRCasFinder matches to NZ_CP052129 (Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence) position: , mismatch: 22, identity: 0.732

cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcag	CRISPR spacer
cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcag	Protospacer
************************************************************

139. spacer 1.1|446514|82|NZ_CP052091|CRISPRCasFinder matches to NZ_CP052131 (Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence) position: , mismatch: 22, identity: 0.732

cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcag	CRISPR spacer
cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcag	Protospacer
************************************************************

140. spacer 1.1|446514|82|NZ_CP052091|CRISPRCasFinder matches to NZ_CP052091 (Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence) position: , mismatch: 22, identity: 0.732

cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcag	CRISPR spacer
cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcag	Protospacer
************************************************************

141. spacer 1.1|446514|82|NZ_CP052091|CRISPRCasFinder matches to NZ_CP021449 (Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence) position: , mismatch: 23, identity: 0.72

cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcag	CRISPR spacer
cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcaa	Protospacer
***********************************************************.

142. spacer 1.1|446514|82|NZ_CP052091|CRISPRCasFinder matches to CP023013 (Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence) position: , mismatch: 23, identity: 0.72

cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcag	CRISPR spacer
cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcaa	Protospacer
***********************************************************.

143. spacer 1.1|446514|82|NZ_CP052091|CRISPRCasFinder matches to NZ_CP049788 (Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence) position: , mismatch: 23, identity: 0.72

cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcag	CRISPR spacer
cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcaa	Protospacer
***********************************************************.

144. spacer 1.1|446514|82|NZ_CP052091|CRISPRCasFinder matches to NZ_CP022766 (Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence) position: , mismatch: 23, identity: 0.72

cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcag	CRISPR spacer
cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcaa	Protospacer
***********************************************************.

145. spacer 1.1|446514|82|NZ_CP052091|CRISPRCasFinder matches to NZ_CP021763 (Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence) position: , mismatch: 23, identity: 0.72

cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcag	CRISPR spacer
cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcaa	Protospacer
***********************************************************.

146. spacer 1.1|446514|82|NZ_CP052091|CRISPRCasFinder matches to NZ_CP015116 (Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence) position: , mismatch: 23, identity: 0.72

cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcag	CRISPR spacer
cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcaa	Protospacer
***********************************************************.

147. spacer 1.1|446514|82|NZ_CP052091|CRISPRCasFinder matches to NZ_CP016905 (Ralstonia solanacearum strain KACC 10709 plasmid unnamed1) position: , mismatch: 23, identity: 0.72

cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcag	CRISPR spacer
cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcaa	Protospacer
***********************************************************.

148. spacer 1.1|446514|82|NZ_CP052091|CRISPRCasFinder matches to NZ_CP025986 (Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence) position: , mismatch: 23, identity: 0.72

cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcag	CRISPR spacer
cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcaa	Protospacer
***********************************************************.

149. spacer 1.1|446514|82|NZ_CP052091|CRISPRCasFinder matches to NZ_CP022769 (Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence) position: , mismatch: 23, identity: 0.72

cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcag	CRISPR spacer
cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcaa	Protospacer
***********************************************************.

150. spacer 1.1|446514|82|NZ_CP052091|CRISPRCasFinder matches to NZ_CP015851 (Ralstonia solanacearum strain YC40-M plasmid, complete sequence) position: , mismatch: 23, identity: 0.72

cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcag	CRISPR spacer
cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcaa	Protospacer
***********************************************************.

151. spacer 1.1|446514|82|NZ_CP052091|CRISPRCasFinder matches to NZ_CP022773 (Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence) position: , mismatch: 23, identity: 0.72

cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcag	CRISPR spacer
cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcaa	Protospacer
***********************************************************.

152. spacer 1.1|446514|82|NZ_CP052091|CRISPRCasFinder matches to NZ_CP022783 (Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence) position: , mismatch: 23, identity: 0.72

cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcag	CRISPR spacer
cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcaa	Protospacer
***********************************************************.

153. spacer 1.1|446514|82|NZ_CP052091|CRISPRCasFinder matches to NZ_CP022791 (Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence) position: , mismatch: 23, identity: 0.72

cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcag	CRISPR spacer
cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcaa	Protospacer
***********************************************************.

154. spacer 1.1|446514|82|NZ_CP052091|CRISPRCasFinder matches to NZ_CP022795 (Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence) position: , mismatch: 23, identity: 0.72

cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcag	CRISPR spacer
cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcaa	Protospacer
***********************************************************.

155. spacer 1.1|446514|82|NZ_CP052091|CRISPRCasFinder matches to NZ_CP009763 (Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence) position: , mismatch: 23, identity: 0.72

cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcag	CRISPR spacer
cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcaa	Protospacer
***********************************************************.

156. spacer 1.1|446514|82|NZ_CP052091|CRISPRCasFinder matches to CP023015 (Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence) position: , mismatch: 23, identity: 0.72

cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcag	CRISPR spacer
cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcaa	Protospacer
***********************************************************.

157. spacer 1.1|446514|82|NZ_CP052091|CRISPRCasFinder matches to NZ_CP022779 (Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence) position: , mismatch: 23, identity: 0.72

cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcag	CRISPR spacer
cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcaa	Protospacer
***********************************************************.

158. spacer 1.1|446514|82|NZ_CP052091|CRISPRCasFinder matches to NZ_CP052077 (Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence) position: , mismatch: 23, identity: 0.72

cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcag	CRISPR spacer
cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcaa	Protospacer
***********************************************************.

159. spacer 1.1|446514|82|NZ_CP052091|CRISPRCasFinder matches to NZ_CP052079 (Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence) position: , mismatch: 23, identity: 0.72

cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcag	CRISPR spacer
cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcaa	Protospacer
***********************************************************.

160. spacer 1.1|446514|82|NZ_CP052091|CRISPRCasFinder matches to NZ_CP022781 (Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence) position: , mismatch: 23, identity: 0.72

cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcag	CRISPR spacer
cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcaa	Protospacer
***********************************************************.

161. spacer 1.1|446514|82|NZ_CP052091|CRISPRCasFinder matches to NZ_CP052125 (Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence) position: , mismatch: 23, identity: 0.72

cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcag	CRISPR spacer
cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcaa	Protospacer
***********************************************************.

162. spacer 1.1|446514|82|NZ_CP052091|CRISPRCasFinder matches to NZ_CP022793 (Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence) position: , mismatch: 23, identity: 0.72

cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcag	CRISPR spacer
cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcaa	Protospacer
***********************************************************.

163. spacer 1.1|446514|82|NZ_CP052091|CRISPRCasFinder matches to NZ_CP022785 (Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence) position: , mismatch: 23, identity: 0.72

cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcag	CRISPR spacer
cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcaa	Protospacer
***********************************************************.

164. spacer 1.1|446514|82|NZ_CP052091|CRISPRCasFinder matches to NZ_CP022787 (Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence) position: , mismatch: 23, identity: 0.72

cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcag	CRISPR spacer
cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcaa	Protospacer
***********************************************************.

165. spacer 1.1|446514|82|NZ_CP052091|CRISPRCasFinder matches to NZ_CP022756 (Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence) position: , mismatch: 23, identity: 0.72

cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcag	CRISPR spacer
cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcaa	Protospacer
***********************************************************.

166. spacer 1.1|446514|82|NZ_CP052091|CRISPRCasFinder matches to NZ_CP052123 (Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence) position: , mismatch: 23, identity: 0.72

cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcag	CRISPR spacer
cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcaa	Protospacer
***********************************************************.

167. spacer 1.1|446514|82|NZ_CP052091|CRISPRCasFinder matches to CP011998 (Ralstonia solanacearum strain YC45 plasmid, complete sequence) position: , mismatch: 23, identity: 0.72

cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcag	CRISPR spacer
cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcaa	Protospacer
***********************************************************.

168. spacer 1.1|446514|82|NZ_CP052091|CRISPRCasFinder matches to NZ_CP052081 (Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence) position: , mismatch: 23, identity: 0.72

cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcag	CRISPR spacer
cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcaa	Protospacer
***********************************************************.

169. spacer 1.1|446514|82|NZ_CP052091|CRISPRCasFinder matches to NZ_CP052083 (Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence) position: , mismatch: 23, identity: 0.72

cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcag	CRISPR spacer
cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcaa	Protospacer
***********************************************************.

170. spacer 1.1|446514|82|NZ_CP052091|CRISPRCasFinder matches to NZ_CP052111 (Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence) position: , mismatch: 23, identity: 0.72

cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcag	CRISPR spacer
cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcaa	Protospacer
***********************************************************.

171. spacer 1.1|446514|82|NZ_CP052091|CRISPRCasFinder matches to NZ_CP052113 (Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence) position: , mismatch: 23, identity: 0.72

cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcag	CRISPR spacer
cgccaaggccggcagcaagttcgatccgtacacggatggtgcgcttgcccgcgtcggcaa	Protospacer
***********************************************************.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

948083 : 969984

Vibrio_phage(50.0%)

plate,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011004038.1\|948083_949430_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_028854260.1\|949473_950148_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_011004040.1\|950422_951070_+	hypothetical protein	NA	NA	NA	NA
WP_011004041.1\|951106_951619_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_058908677.1\|951611_953102_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_011004043.1\|953190_953694_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_011004044.1\|953754_954228_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_058908678.1\|954290_956141_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_058908679.1\|956104_957196_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_028861634.1\|957228_959946_+	type VI secretion system ATPase TssH	A0A2I7SAX5	Vibrio_phage	4.5e-85	32.0
WP_071623901.1\|959966_962723_+	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	3.5e-37	25.5
WP_089191096.1\|962740_963874_+	DUF4123 domain-containing protein	NA	NA	NA	NA
WP_119889934.1\|963851_966629_+	hypothetical protein	NA	NA	NA	NA
WP_058908010.1\|966641_967715_+	hypothetical protein	NA	NA	NA	NA
WP_071653888.1\|967746_968571_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_011003443.1\|968652_969984_+\|transposase	IS701-like element ISRso17 family transposase	NA	NA	NA	NA

DBSCAN-SWA_2

1659152 : 1706610

uncultured_Caudovirales_phage(25.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011003443.1\|1659152_1660484_-\|transposase	IS701-like element ISRso17 family transposase	NA	NA	NA	NA
WP_087451503.1\|1660868_1661673_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_071653928.1\|1661699_1662524_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_011003443.1\|1662632_1663964_+\|transposase	IS701-like element ISRso17 family transposase	NA	NA	NA	NA
WP_028854568.1\|1664465_1666097_+	MCP four helix bundle domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	6.7e-20	33.1
WP_058908595.1\|1666344_1668942_+	2-oxoglutarate dehydrogenase E1 component	NA	NA	NA	NA
WP_011004615.1\|1669612_1670515_-	acyltransferase	NA	NA	NA	NA
WP_058908594.1\|1670627_1671650_-	FAD:protein FMN transferase	NA	NA	NA	NA
WP_011004617.1\|1671654_1672062_-	cytochrome c5 family protein	NA	NA	NA	NA
WP_058908593.1\|1672290_1674231_+	nitrous-oxide reductase	NA	NA	NA	NA
WP_071624145.1\|1674288_1676907_+	regulatory protein NosR	NA	NA	NA	NA
WP_016727950.1\|1676903_1678175_+	nitrous oxide reductase family maturation protein NosD	NA	NA	NA	NA
WP_019719967.1\|1678158_1679103_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.3e-28	33.7
WP_016724593.1\|1679099_1679924_+	ABC transporter permease	NA	NA	NA	NA
WP_058908591.1\|1679920_1680451_+	nitrous oxide reductase accessory protein NosL	NA	NA	NA	NA
WP_071624144.1\|1680870_1688409_+	type III effector protein skwp2	NA	NA	NA	NA
WP_139274363.1\|1698792_1699038_+	hypothetical protein	NA	NA	NA	NA
WP_020829521.1\|1699374_1700361_+\|transposase	IS5 family transposase	E5E3P6	Burkholderia_phage	7.6e-152	81.7
WP_149079313.1\|1700480_1700876_+	hypothetical protein	NA	NA	NA	NA
WP_071653902.1\|1701114_1702809_+	ShlB/FhaC/HecB family hemolysin secretion/activation protein	NA	NA	NA	NA
WP_011004625.1\|1703139_1703442_-	AzlD family protein	NA	NA	NA	NA
WP_089191141.1\|1703438_1704179_-	AzlC family ABC transporter permease	NA	NA	NA	NA
WP_016725410.1\|1704309_1704768_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
WP_089190850.1\|1705244_1706610_+\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	7.2e-76	53.8

DBSCAN-SWA_3

1850404 : 1918617

Bacillus_virus(16.67%)

coat,protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_058907856.1\|1850404_1851382_-\|coat	spore coat U domain-containing protein	NA	NA	NA	NA
WP_058907837.1\|1851378_1853772_-	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_086005454.1\|1853771_1854455_-	molecular chaperone	NA	NA	NA	NA
WP_011004747.1\|1854544_1855066_-\|coat	spore coat U domain-containing protein	NA	NA	NA	NA
WP_016723579.1\|1855568_1856153_-	SCO family protein	NA	NA	NA	NA
WP_071623712.1\|1856149_1856941_-	formylglycine-generating enzyme family protein	NA	NA	NA	NA
WP_023470340.1\|1856960_1858454_-	nitrite reductase, copper-containing	NA	NA	NA	NA
WP_011004751.1\|1858730_1859033_+	DUF2249 domain-containing protein	NA	NA	NA	NA
WP_011004752.1\|1859076_1861347_+	nitric-oxide reductase large subunit	NA	NA	NA	NA
WP_071013739.1\|1861605_1862328_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_071013744.1\|1862386_1863172_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	3.9e-34	38.3
WP_011004755.1\|1863161_1864058_+	ABC transporter permease	NA	NA	NA	NA
WP_019719871.1\|1864105_1865146_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_011004757.1\|1865179_1865578_+	DUF488 domain-containing protein	NA	NA	NA	NA
WP_019719870.1\|1866074_1867478_+	diguanylate cyclase	A0A127AWB9	Bacillus_phage	2.3e-21	38.6
WP_011004758.1\|1867663_1867882_+	DUF1059 domain-containing protein	NA	NA	NA	NA
WP_058907842.1\|1867989_1868688_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_016726400.1\|1868769_1869207_-	multidrug/biocide efflux PACE transporter	NA	NA	NA	NA
WP_021155502.1\|1869320_1870205_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_011004762.1\|1870281_1870674_-	RidA family protein	NA	NA	NA	NA
WP_011004763.1\|1870670_1871642_-	threo-3-hydroxy-L-aspartate ammonia-lyase	NA	NA	NA	NA
WP_058907843.1\|1871638_1872283_-	transcriptional regulator	NA	NA	NA	NA
WP_058907844.1\|1872485_1873022_+	signal peptide protein	NA	NA	NA	NA
WP_058907845.1\|1873129_1874833_+	SulP family inorganic anion transporter	NA	NA	NA	NA
WP_020371802.1\|1874841_1875540_-	hypothetical protein	NA	NA	NA	NA
WP_021155598.1\|1875654_1877478_-	virulence factor family protein	NA	NA	NA	NA
WP_064048021.1\|1877474_1880126_-	bifunctional lysylphosphatidylglycerol flippase/synthetase MprF	NA	NA	NA	NA
WP_014632055.1\|1880458_1880647_-	hypothetical protein	NA	NA	NA	NA
WP_020371516.1\|1880992_1882510_+	GGDEF domain-containing protein	NA	NA	NA	NA
WP_043885669.1\|1882709_1884419_+\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_020371804.1\|1884993_1886319_+	DUF3500 domain-containing protein	Q7Y402	Yersinia_phage	2.6e-06	46.8
WP_016723603.1\|1886344_1887595_+	HupE/UreJ family protein	NA	NA	NA	NA
WP_038937972.1\|1887757_1888279_-	hypothetical protein	NA	NA	NA	NA
WP_058907853.1\|1888628_1889666_+	isopenicillin N synthase family oxygenase	NA	NA	NA	NA
WP_043885670.1\|1889779_1891927_-	multicopper oxidase family protein	NA	NA	NA	NA
WP_016725441.1\|1892541_1893009_-	DUF2846 domain-containing protein	NA	NA	NA	NA
WP_028854671.1\|1893008_1893395_-	hypothetical protein	NA	NA	NA	NA
WP_119889925.1\|1893640_1894486_-	peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA
WP_089190929.1\|1894498_1896268_-	ShlB/FhaC/HecB family hemolysin secretion/activation protein	NA	NA	NA	NA
WP_058908831.1\|1896272_1896887_-	hypothetical protein	NA	NA	NA	NA
WP_058908826.1\|1896984_1899525_-	filamentous hemagglutinin N-terminal domain-containing protein	A0A0R6PJK4	Moraxella_phage	2.4e-16	30.8
WP_058908832.1\|1899574_1899943_-	hypothetical protein	NA	NA	NA	NA
WP_071615618.1\|1900772_1901126_-	hypothetical protein	NA	NA	NA	NA
WP_071615620.1\|1901290_1901497_-	hypothetical protein	NA	NA	NA	NA
WP_058908828.1\|1901545_1902064_-	DUF2247 family protein	NA	NA	NA	NA
WP_020829521.1\|1902205_1903192_-\|transposase	IS5 family transposase	E5E3P6	Burkholderia_phage	7.6e-152	81.7
WP_071615619.1\|1903326_1903761_-	hypothetical protein	NA	NA	NA	NA
WP_058908830.1\|1903812_1904055_-	hypothetical protein	NA	NA	NA	NA
WP_139274350.1\|1904044_1904395_-	hypothetical protein	NA	NA	NA	NA
WP_087451503.1\|1904426_1905232_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_016725060.1\|1914369_1914585_+	hypothetical protein	NA	NA	NA	NA
WP_028854674.1\|1914811_1915324_+	DUF1993 family protein	NA	NA	NA	NA
WP_011004795.1\|1915481_1915811_-	hypothetical protein	NA	NA	NA	NA
WP_011004797.1\|1916592_1916955_-	hypothetical protein	NA	NA	NA	NA
WP_016725057.1\|1917144_1918617_-\|protease	DegQ family serine endoprotease	A0A1B1IT49	uncultured_Mediterranean_phage	1.6e-25	29.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP052090

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP052091

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CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection