CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP053986	Achromobacter denitrificans strain FDAARGOS_788 chromosome, complete genome	4 crisprs	csa3,DinG,RT,DEDDh,WYL	0	0	3	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP053986_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053986_1

323198-323317

Orphan

Consensus_repeat	Method
GGGGCGTTTTCATCTTGGGGCGGCCCGGCGATGAAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP053986_1

>merge|NZ_CP053986|1|323198-323317|CRISPRCasFinder
GGGGCGTTTTCATCTTGGGGCGGCCCGGCGATGAAAAGATGCCCCCACGCTGCGCCCGCTGCGCGGGCTCGCTGCCCCCCAAGGGGGCGTTTTCATCTTGGGGCGGCCCGGCGATGAAAA

>NZ_CP053986|1|1|323198-323317|CRISPRCasFinder
GGGGCGTTTTCATCTTGGGGCGGCCCGGCGATGAAAA	GATGCCCCCACGCTGCGCCCGCTGCGCGGGCTCGCTGCCCCCCAAG
GGGGCGTTTTCATCTTGGGGCGGCCCGGCGATGAAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053986.1\|WP_062684360.1\|327633_329439_+\|cation:proton-antiporter	unknown	unknown	gnl\|CDD\|235131
NZ_CP053986.1\|WP_062684371.1\|313135_316627_+\|DNA-polymerase-III-subunit-alpha	unknown	unknown	gnl\|CDD\|235554
NZ_CP053986.1\|WP_062684359.1\|329561_329792_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053986.1\|WP_062684406.1\|329918_330620_-\|DUF3053-domain-containing-protein	unknown	unknown	gnl\|CDD\|371434
NZ_CP053986.1\|WP_062684372.1\|312120_313020_-\|lipid-A-hydroxylase-LpxO	unknown	unknown	gnl\|CDD\|380241
NZ_CP053986.1\|WP_062684367.1\|319317_320427_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|340846
NZ_CP053986.1\|WP_082775767.1\|340270_342229_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|226654
NZ_CP053986.1\|WP_062684405.1\|330826_332290_-\|ribonuclease-G	unknown	unknown	gnl\|CDD\|183285
NZ_CP053986.1\|WP_087881394.1\|320657_321383_+\|polysaccharide-deacetylase-family-protein	unknown	unknown	gnl\|CDD\|213023
NZ_CP053986.1\|WP_062684373.1\|310778_312074_+\|AAA-associated-domain-containing-protein	unknown	unknown	gnl\|CDD\|224041
NZ_CP053986.1\|WP_062684361.1\|325697_327473_+\|lipid-A-export-permease/ATP-binding-protein-MsbA	unknown	unknown	gnl\|CDD\|131258
NZ_CP053986.1\|WP_062684370.1\|316626_317727_+\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|340831
NZ_CP053986.1\|WP_062684364.1\|322514_323105_-\|ATP-phosphoribosyltransferase-regulatory-subunit	unknown	unknown	gnl\|CDD\|238396
NZ_CP053986.1\|WP_075873312.1\|323530_323800_-\|YkgJ-family-cysteine-cluster-protein	unknown	unknown	gnl\|CDD\|308985
NZ_CP053986.1\|WP_062684369.1\|317723_318572_+\|polysaccharide-deacetylase-family-protein	unknown	unknown	gnl\|CDD\|213026
NZ_CP053986.1\|WP_062684368.1\|318568_319321_+\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|133005
NZ_CP053986.1\|WP_062682049.1\|338864_340220_-\|sigma-54-dependent-Fis-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225114
NZ_CP053986.1\|WP_062684362.1\|324622_325594_-\|heptosyltransferase	unknown	unknown	gnl\|CDD\|366450
NZ_CP053986.1\|WP_062684365.1\|321357_322518_+\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|340831
NZ_CP053986.1\|WP_062684363.1\|323845_324610_-\|YdcF-family-protein	unknown	unknown	gnl\|CDD\|99750

Protein	Function_ID	Function_description	E-value
NZ_CP053986.1\|WP_062684360.1\|327633_329439_+\|cation:proton-antiporter	gnl\|CDD\|235131	PRK03562, PRK03562, glutathione-regulated potassium-efflux system protein KefC; Provisional.	0
NZ_CP053986.1\|WP_062684371.1\|313135_316627_+\|DNA-polymerase-III-subunit-alpha	gnl\|CDD\|235554	PRK05673, dnaE, DNA polymerase III subunit alpha; Validated.	0
NZ_CP053986.1\|WP_062684405.1\|330826_332290_-\|ribonuclease-G	gnl\|CDD\|183285	PRK11712, PRK11712, ribonuclease G; Provisional.	0
NZ_CP053986.1\|WP_062684406.1\|329918_330620_-\|DUF3053-domain-containing-protein	gnl\|CDD\|371434	pfam11254, DUF3053, Protein of unknown function (DUF3053). Some members in this family of proteins are annotated as the membrane protein YiaF. No function is currently known.	3.80953e-73
NZ_CP053986.1\|WP_062684372.1\|312120_313020_-\|lipid-A-hydroxylase-LpxO	gnl\|CDD\|380241	NF033391, lipid_A_LpxO, lipid A hydroxylase LpxO. Members of this family are LpxO, an enzyme that modifies one of the lipid chains in lipid A by hydroxylation, with resulting changes in resistance to the host immune response and to the antibiotic colistin. This family, as built, includes LpxO1 from Pseudomonas aeruginosa, but not its paralog LpxO2.	0
NZ_CP053986.1\|WP_062684367.1\|319317_320427_+\|glycosyltransferase	gnl\|CDD\|340846	cd03819, GT4_WavL-like, Vibrio cholerae WavL and similar sequences. This family is most closely related to the GT4 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.	1.06416e-60
NZ_CP053986.1\|WP_082775767.1\|340270_342229_-\|sensor-histidine-kinase	gnl\|CDD\|226654	COG4191, COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms].	2.86728e-180
NZ_CP053986.1\|WP_087881394.1\|320657_321383_+\|polysaccharide-deacetylase-family-protein	gnl\|CDD\|213023	cd10918, CE4_NodB_like_5s_6s, Putative catalytic NodB homology domain of PgaB, IcaB, and similar proteins which consist of a deformed (beta/alpha)8 barrel fold with 5- or 6-strands. This family belongs to the large and functionally diverse carbohydrate esterase 4 (CE4) superfamily, whose members show strong sequence similarity with some variability due to their distinct carbohydrate substrates. It includes bacterial poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, hemin storage system HmsF protein in gram-negative species, intercellular adhesion proteins IcaB, and many uncharacterized prokaryotic polysaccharide deacetylases. It also includes a putative polysaccharide deacetylase YxkH encoded by the Bacillus subtilis yxkH gene, which is one of six polysaccharide deacetylase gene homologs present in the Bacillus subtilis genome. Sequence comparison shows all family members contain a conserved domain similar to the catalytic NodB homology domain of rhizobial NodB-like proteins, which consists of a deformed (beta/alpha)8 barrel fold with 6 or 7 strands. However, in this family, most proteins have 5 strands and some have 6 strands. Moreover, long insertions are found in many family members, whose function remains unknown.	2.05329e-58
NZ_CP053986.1\|WP_062684373.1\|310778_312074_+\|AAA-associated-domain-containing-protein	gnl\|CDD\|224041	COG1116, TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism].	3.03718e-106
NZ_CP053986.1\|WP_062684361.1\|325697_327473_+\|lipid-A-export-permease/ATP-binding-protein-MsbA	gnl\|CDD\|131258	TIGR02203, Lipid_A_export_ATP-binding/permease_protein_msbA., lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides, Transport and binding proteins, Other].	0
NZ_CP053986.1\|WP_062684370.1\|316626_317727_+\|glycosyltransferase-family-4-protein	gnl\|CDD\|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	5.86635e-67
NZ_CP053986.1\|WP_062684364.1\|322514_323105_-\|ATP-phosphoribosyltransferase-regulatory-subunit	gnl\|CDD\|238396	cd00773, HisRS-like_core, Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain. HisRS is a homodimer. It is responsible for the attachment of histidine to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP-dependent formation of the enzyme bound aminoacyl-adenylate. Class II assignment is based upon its structure and the presence of three characteristic sequence motifs. This domain is also found at the C-terminus of eukaryotic GCN2 protein kinase and at the N-terminus of the ATP phosphoribosyltransferase accessory subunit, HisZ. HisZ along with HisG catalyze the first reaction in histidine biosynthesis. HisZ is found only in a subset of bacteria and differs from HisRS in lacking a C-terminal anti-codon binding domain.	1.57707e-24
NZ_CP053986.1\|WP_075873312.1\|323530_323800_-\|YkgJ-family-cysteine-cluster-protein	gnl\|CDD\|308985	pfam03692, CxxCxxCC, Putative zinc- or iron-chelating domain. This family of proteins contains 8 conserved cysteines. It has in the past been annotated as being one of the complex of proteins of the flagellar Fli complex. However this was due to a mis-annotation of the original Salmonella LT2 Genbank entry of 'fliB'. With all its conserved cysteines it is possibly a domain that chelates iron or zinc ions.	6.73714e-06
NZ_CP053986.1\|WP_062684369.1\|317723_318572_+\|polysaccharide-deacetylase-family-protein	gnl\|CDD\|213026	cd10969, CE4_Ecf1_like_5s, Putative catalytic NodB homology domain of a hypothetical protein Ecf1 from Escherichia coli and similar proteins. This family contains a hypothetical protein Ecf1 from Escherichia coli and its prokaryotic homologs. Although their biochemical properties remain to be determined, members in this family contain a conserved domain with a 5-stranded beta/alpha barrel, which is similar to the catalytic NodB homology domain of rhizobial NodB-like proteins, belonging to the larger carbohydrate esterase 4 (CE4) superfamily.	9.24959e-86
NZ_CP053986.1\|WP_062684368.1\|318568_319321_+\|glycosyltransferase-family-2-protein	gnl\|CDD\|133005	cd02511, Beta4Glucosyltransferase, UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.	6.6342e-109
NZ_CP053986.1\|WP_062682049.1\|338864_340220_-\|sigma-54-dependent-Fis-family-transcriptional-regulator	gnl\|CDD\|225114	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms].	0
NZ_CP053986.1\|WP_062684362.1\|324622_325594_-\|heptosyltransferase	gnl\|CDD\|366450	pfam01075, Glyco_transf_9, Glycosyltransferase family 9 (heptosyltransferase). Members of this family belong to glycosyltransferase family 9. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. All of these enzymes transfer heptose to the lipopolysaccharide core.	2.71709e-47
NZ_CP053986.1\|WP_062684365.1\|321357_322518_+\|glycosyltransferase-family-4-protein	gnl\|CDD\|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	5.57987e-41
NZ_CP053986.1\|WP_062684363.1\|323845_324610_-\|YdcF-family-protein	gnl\|CDD\|99750	cd06259, YdcF-like, YdcF-like. YdcF-like is a large family of mainly bacterial proteins, with a few members found in fungi, plants, and archaea. Escherichia coli YdcF has been shown to bind S-adenosyl-L-methionine (AdoMet), but a biochemical function has not been idenitified. The family also includes Escherichia coli sanA and Salmonella typhimurium sfiX, which are involved in vancomycin resistance; sfiX may also be involved in murein synthesis.	8.80844e-42

>NZ_CP053986.1|WP_062684364.1|322514_323105_-|ATP-phosphoribosyltransferase-regulatory-subunit
MKTDSGAIFIDAGAEEAIVPALWSQDTFVQKTGGSEIIDQMWAFPDKKGRPCCLIPEATALFQERCKDLLGRRQERLLFYVARCYRYERPQAGRYREFSQLGFEYLGPNPRSAAERSQEIAVGFLDSLGLRYELDDAAKRGLSYYLGGQGFEIRCAELGAQQQVLGGGAYREGAGFAIGAERLLLAMEAQALIGRA
>NZ_CP053986.1|WP_062684365.1|321357_322518_+|glycosyltransferase-family-4-protein
MKTPAGAVERRLRIALLVDRFGNRFGGAEAYGVELMRVLGQRHDVSVVARDFDSDLPFPFLPVRFPAWLPSWMRVLYFAWRADRLTRGRYDIVHSHMNGWAGEIQVMHVTPVRYNRLTRVKPLQRLTAWLSPRLATYLLLEKLRVRAVPARRVVAVSGLIMDQLHRSYGPQLPVDIIAPGVKLPTAAQREGREETRARLGWDAETIGCLLVARNPLRKGLPALLDALGQLPPQYRLLVVGADEPTRERVWAAGAIASRVTLIDPTPDVARYFSAADIYAHPTLNDSYGMAPLEAMSHGLPVVVSSPAYCGFAQYLSAGKDALILQDPRNGAQLAQALERLGSEPDLRAALAERGLAIAREQSWEAVASRYEDLYAQVLRERGQAGA
>NZ_CP053986.1|WP_087881394.1|320657_321383_+|polysaccharide-deacetylase-family-protein
MSIPILMYHQIGEPNPKGTPYRGLTVHPASFARQMRWMRRLGYRGLSMRDIMPYVRGERQGKVFGITFDDGYRNVHHNAMPVLSELGFTATNYFVAHQFDGGNVWDLQKGIPFSALMTVNEMREWAQAGNEVGSHTLDHVHLPKIAPEEARRQIVESKDELEQALGGPVTAFCYPYGDHGPEHRVMVREAGYDNATLTQRGLAAVSDDPYGLPRVTVARSTNIIRFLQKCLTRYEDSRRRR
>NZ_CP053986.1|WP_062684367.1|319317_320427_+|glycosyltransferase
MKILYTNFHAGNGGGHVTYIINLAKALAREHQITVAAPSTSRLYRYAQAIPGVTVEPMQYTTRPSSWFKDRAQLRRLIKAGRYDIIHANGSADHKQVMLATLGMSRRPRIVFTKHNDHPLTSFGHKLRVALATDHSIAVSDYIHGLMANSPYGKRPITTIRHGIDTDFFAPPPPESLDKLRALIFGPDWQGKLLLGSAGGTDYDKGWLDLVAAAAALPPADKARVLLMVAGDAPSEAKLARVRELGMIDQVRFPGLLDDVRASLAACHAGFVLSYREALSFACREIMGLGLPALVSDAGGLPENVTDGVDGWIVPVRDVPAITAKLRFMLDHPDAVRTMGAQARETAVRDFNLQRFAAATLDVYRRTLA
>NZ_CP053986.1|WP_062684368.1|318568_319321_+|glycosyltransferase-family-2-protein
MKLSVIIITKNEAANIAACLKSVAFADEFIVVDSGSTDGTVELAQALGARVEVTSDWPGFGPQKNRALDLATGDWVLSIDADERVTPELAQEIQEALSAPRADAYEIARLSNFCGRDIRHSGWWPDYVLRLFKRGTARFTDAAVHERVVPANGQPLKMRGYFHHYPYDNLDALITKVNRYSSDAAAMMYAKGKRTSIFGALGHGFWTFVRIYLIRRGFLDGKHGLVLAVTAAAGSFFRYSKLMFLADKQK
>NZ_CP053986.1|WP_062684369.1|317723_318572_+|polysaccharide-deacetylase-family-protein
MNAPNVPVLMYHHVTPAGGMIAATPDVFEAQISRLARAGYHSLSAAQFAAYLAGGEAPERSVLITFDDGYLNNWVHAHPVLARHGMRAVLFTITGWIGDGPLRPHAGQGGPLPATPDHDACKQLVASGRADDAMLRWSEIEAMQAAGTFEFHSHTHTHTRWDKVCGADTDAKRARIAQELRDSRETLVRRLGQASDHLCWPQGYFDADYVAAAREAGFRHLYTTDPFGQNSPGADPEHIYRFAVRNQAGSWLNRRIWLSRDPFWGPRFHAWKAWKKRLRNRG
>NZ_CP053986.1|WP_062684370.1|316626_317727_+|glycosyltransferase-family-4-protein
MRSLRIVHSEAATSFGGQEGRIFKEMTAMRARGHHMEAICQPQALLAERLSDAGFTVHTLEMDGVANYLKGVATIRGILREGRFDVLNTHSRRDTVIAAAAGRLAGTPLIVRTRHLSNKVGSLWSYTRLPHRVTTVSDHVRQHLIDRGVPADRVATVYSPIVLPPPVERSTLREELGLADDDIVVGCVAVMRATKGHKDLIDAIAPLMASRPRLHLVFVGGGSPVFEQTQAYVVELGLQDRIHLMGMRRDVPNLLAGFDLFALATQQEASGTVYVEAQASGLPVIGTDVGGVSEMFRDGETGILVPPKDARALTEALQRLIDDADLRRRMGEAGRKMVWDEGVFSPARLAETTEAVYARWLGERAK
>NZ_CP053986.1|WP_062684371.1|313135_316627_+|DNA-polymerase-III-subunit-alpha
MSEAVTNPSPFVHLRVHSEFSVVDGIVRIPDLIKRVAKLGQPAVALTDLSNLFGLIKFYKGARGAGVKPIAGCDVWLSNDDDPAKPFRLLLLVRNHQGYLNLCELLTKAFLTNQGKGRAEIRREWLQGQDGLIVLSGGRGGDVGQALDAGNAVSALALARQWAHLFPGSFYIELQRAGMDGDEAYTQAAMRLAAEAGLPVVATHPVQFLDEFEFQAHEARVCIAEGEILANPRRVRRFSKEQYLLSSEEMARRFADVPSALANTVEIAKRCNLSLVLGKPRLPNFPTPEGVTLDDYLVQLSEEGLEKRMRFLFPDDAERESKREQYYERLRWECKTIIQMGFPGYFLIVQDFINWGKNNGVPVGPGRGSGAGSLVAYALGITDLDPIRYDLLFERFLNPERVSMPDFDIDFCQDNRERVIDYVKEKYGRAAVSQIATFGTLGAKAVVRDAGRVLDMPYMFCDGLSKLIPFNPMDPWTLERTLKDEPAFKDRYEQEEEVRALVDLAKPLEGLTRNIGMHAGGVLIAPGKLTDFCPLYCQPGQENSAVSQFDKDDVEAAGLVKFDFLGLRNLTILDWAVRYVRQFNEDKRDFDVMALALDDPAAYKILCDANTTAVFQLESRGMKELLKKLRPNTFEDIIAMLALYRPGPLESGMVDDFVNRKHGRAAVDYFHSDLESTLKSTYGVIVYQEQVMLISQIIGGYSLGGADLLRRAMGKKKPEEMAKHRELFEQGAKEKGHDPDLAVKLFDLMEKFAGYGFNKSHSAAYALISYQTAWLKAYHPTEFLAATMSSDMDDTDKVQIFCRDAQDNGVEVLPPDVNFSGYRFEPVADKHTKNGKPPRTMRYGLGAVKGTGQGAVEDILRARKEGGPFLNLFDFCRRVSKHAVNRRTIEALIKAGAFDTIEPNRAAMLASVPTAMEAAEQAARSANQASLFGDDSSDVVAGELAKVAPWDLHKKLTEEKTALGYYYSGHLFDAWRDEVRRIVPMQLARVEPQRDLQWMCGVLASVRVMMTRRGKMVFAVLDDGTAQVEISVFNELYEKHRNRLREDQLVIVQGKVSNDDYSGGMRIVAEQLYDLQLAREARAKSLRVKLNGSADAARLRQMLNPFRAEPENGIPGVPVDIVYSKNNFLCTVRLGEEWRVRMADTLLANLNEWTKPDGVEVTY
>NZ_CP053986.1|WP_062684372.1|312120_313020_-|lipid-A-hydroxylase-LpxO
MKWLIPGIWLAAILFAHFRGRVKLPLGRQMLDHSVLLAPINAFMVLASRVPPTPYLTTSEIAELKVLDDNWETIREEAVQMAELRRIKAADTHNDIGFNSFFKYGWKRFYLKWYDARHPSAEELCPKTVAILKTLPKVKAAMFAELPPGGQLNRHRDPFAGSLRYHLGLVTPNDDRCHIIVDGEPYSWRDGESVVFDETYVHEAYNRSEQNRIILFCDVERPLKWRWAEAFNRWFGRVVMSAASSPNDGGDQTGAINKLTHAHWVIDQKRKAFKAWNRKVYKATKFGLIALVIVGFLAL
>NZ_CP053986.1|WP_062684373.1|310778_312074_+|AAA-associated-domain-containing-protein
MNPNSLIELHDVGKSFRAADGTARHVLEHVDFTLKEGEIVALLGKSGSGKSTLLRIMAGLVNADHGTVTYRGQPVYGPASGIAMVFQSFALFPWLTAQQNVELGLEAQGVAPAERARRADAVLDLMGLGGFGGALPRELSGGMRQRVGIARALVMNPDVLLMDEAFSALDVLTGETLRDDMLELWDESRISTKGILIVSHNIEEAVMMADRIIVFSSDPGRVRSQILVGLPRPRDVDSAQVRALIDEVYALMTMRPAHDVPTPLQQGLGYRFPQTEVERMEGVLDVLAEAPFNGRADLPKLAEEAEISDDDLLPACEALGLFGLARIDRGDIFLTPLGQRYVLAEQAQKQVIFGRQLLAHVPLAAHIRHSLEQEPAGALPDKVFLGSLEEFLKPDEAERVLKIAVEWGRYGEIYGYDYHTGLLTLPVPDPA
>NZ_CP053986.1|WP_075873312.1|323530_323800_-|YkgJ-family-cysteine-cluster-protein
MNVQACRPDCGACCIAPSISSPIPGMPDGKPAGVRCAQLDEENRCRIFGHPERPAVCGSLPPSLEMCGDSAGEAMSRLTWLEKATAVSP
>NZ_CP053986.1|WP_062684363.1|323845_324610_-|YdcF-family-protein
MPFSSYLANLIIPYNLCMTLVVIGLALGWFRLRKTGGVLIGTGLLWALFWSLPATSLWLGGALESRYPHLPPADSPTADAIVVLGGNTANGRANWFLPYDRDTAVVRVDTAAQLYLAGRAPKVLLSGGALEGDVSEARGMAYAIRQQGVPESALILENSSRTTYENATLTEDQLKARGIDKVLLVTSALHMPRAMAAFSKQGVQVIAAPAPPQIVPPTDGSLPLWLPDQRTFDASRSIIKEYAGLFVYWLRGWV
>NZ_CP053986.1|WP_062684362.1|324622_325594_-|heptosyltransferase
MSDISCLYVRLPNWVGDVCMSLPSLRALQASGLPLVICARPWARDLLDGVAKQDFIPMRGKVGPDRAAVSAHRRSLGALGRRARGLLLPDSLSSALVFRLAGLPSAGYRDDGRSFLLRWPVSKPDDSLHAVQSWHYLTRQALTRWGLPSGPAEPGPTLDLPLTAAHQGAAEQALEAAGLASGRFVLIAPTATGLHKGKIKVWPGFDTLTRALQAQGHTVVMCPPPAETEEARRNAPTALLLPPLSLGAFAALTARAALVICNDSGVSHVAAAAAARELTLFGVTRPGRTGPWSPRAVCVGSENAWPSVEEVVQQAMILLDETQ
>NZ_CP053986.1|WP_062684361.1|325697_327473_+|lipid-A-export-permease/ATP-binding-protein-MsbA
MNSAARHAPAGSHPVKAELWKRIYSRVGSYWKGLLLAILLMAGAAATQPVLAVIMKPLLDGGFSGAKPYYVWALPLAVVGLILLRGICNFFSDYLLAWVANNVLLGMRRDMFERLLGLPDADFKQGDTGRLLNRFTIDAGNVTGYATDVITVLVRETLVVIALICVLLYMSWVLTLIILIMLPVSVLISRFFIQRLRRINRETVNMNAELTRVVGEGIDGQRVIKLFDGYEVERGRFDFVSRRLRRFAMRTATADAALTPLTQVCISISVGAVIAVALSQANSGALTVGSFASFMAALAQIFDPIKRLTNVAARMQKMLVSAESVFTLIDQVPECDTGTRELPEPVRGKVEFRNVSHRFPDADRDTVNDVSFVVEPGQTVALVGRSGSGKTTLVNMLPRFVLADSGQILVDDVPIGDLTLRSLRSHLSLVSQDVVLFDDTIAANVGYGALGKSSEQKVRDALAAANLLEFVDGLPQGMNTPVGENAARLSGGQRQRLAIARALIKNAPILILDEATSALDNESERQVQASLERLMKGRTTLVIAHRLSTVQNADRIIVLDAGKIVEHGGHAELLAAGGLYASLYKMQFRED
>NZ_CP053986.1|WP_062684360.1|327633_329439_+|cation:proton-antiporter
MSLPSDGNQLVNVVVLLGAAVVAVPLFKRLGLGSVLGYLAAGLAIGPFGMGLFSDPRSILHVAELGVVMFLFIIGLEMQPSRLWKLRGEIFGLGVAQVLACGALLTGVGLLAGLSGPAAFMAAMGFVLSSTAIVMQILAERGETASAQGQRIVSILLLEDLAIVPLLALASLLAPAGGAEHGDPWLQAAIAIGCILALLAAGRWLLNPLFRLLAAAHAREVMTAAALLVVLGAALLMELGGLSMAMGAFLAGVLLSESTFRHQLEAEVEPFRGILLGLFFLGVGMSLDLSAVVREWPLILAAVVVFMLVKSAGVYAVARILRATHAEATTRAALLAQGGEFAFVLYGAAAAAGIFDAHTAAVLTAVVIISMAFTPLCVLALRWLLPKPAPSMEGVDVAKDLDGCVLIVGFGRFGQIVTQAMLARDLKVSILDTDTDAIRAAAKWGVKVYYGDGTRVDMLRTAGAEHACIILICIDNPVSVNHMVKLVKAEFPLVRVAVRAYDRIHSLALAKEGVDYQVRETLESALAFGEGALRVIGVPADEAAEVVQDVRKRDTDRFELEVAGGLFAGRSLLYGNMSSPADGRNDKPDREAGEPAASPSA
>NZ_CP053986.1|WP_062684359.1|329561_329792_+|hypothetical-protein
MLQSDRISTTPQAVGVELARRQALALRCGFSAGSMRRLLSQTGGAGPAWSIGAHREADRARGARAFPFRIAAVAAS
>NZ_CP053986.1|WP_062684406.1|329918_330620_-|DUF3053-domain-containing-protein
MKSLFRPFLVLAAALPLLLAACGDKEPEQRAAFTQFLQTRIVDKPGVRVPKLTDEEKKSFGDYAAHYAVITDFNAGMDASVKPLSGIMQKGAVRSLNDIVTRRDDFKAVQASLNEMGTALQAQQAKADAAHAQLKQPEDLKAVYDKAYEKTVSLPADTFRDTLPQLNATFDASLKIADYVAAHASQIEMSGAIVKVKDPAVQAELNQLLQDLNTQAKNVQQAHTRMQAVMMGR
>NZ_CP053986.1|WP_062684405.1|330826_332290_-|ribonuclease-G
MSEDILINVTPFETRVALVEQGSVQELHVERSIQRGHVGNIYLGRVVRVLPGMQSAFIDIGLERAAFIHIADLRENRGERSQGLTPTPIEKLLFEGQTIMVQVVKDPLGTKGARLSTQISMAGRMLVYLPHDPHIGISQKIDTESERIQLRERLQALMPAEEKGGFIVRTQAEGANDEELTADLEYLRKLWTSVQAAARTQPAPALLHQDLTLAQRVLRDMVGPGTGAILVDSRTTSAAMLEWARIYTPSVVDRIQHYSGERPLFDTANVDEEISRALSRRVDLKSGGYLIIDQTEALTTVDVNTGGFVGGRNFDDTIFKTNLEAAQAIARQLRLRNLGGIVILDFIDMEDQEHRETVLAELKKALSRDRTRMTVNGFTQLGLVEMTRKRTRDSLAHQLCEPCPMCEARGNVRTPRTVCYEILREILREARQFNPKEFRILASQEVVDLFLEEESQHLAMLGDFVGKRVSLEVEGRYSQEQYDIILV
>NZ_CP053986.1|WP_062682049.1|338864_340220_-|sigma-54-dependent-Fis-family-transcriptional-regulator
MRQPLPPHAVFIDDDDELRRANAQTLKLHGISVDAHASARAALPALTRAFDGVVVSDIRMPDIDGLQLFRRVREIDPDIPVILITGHGDIATAVQCMHDGAYDFLAKPYAADRLITAITHAAEKRRLVLENRRLREAAFAVEADEVPFIGTTPAMQRIKQTLRHIADADVDVLVEGETGTGKEVVATALHRLSRRRDRPLVAINCGALPESVIESELFGHEAGAFTGAQKKRIGRIEHASGGTLFLDEIESMPLAVQVKLLRVLESRQITPLGSNDVRNLDLRVVAATKEDLGSPAIRATFREDLFYRLNVVTIRIPPLRERREDIPLLFAHYLGHASRRFQRDIPEMPAAIKQHVMTHDWPGNVRELAHFAERVVLGVLNTPVPDAAAATAAALSLPERMERFEAQLIRETLEAHRGDLKATLESLGIPRKTFYDKLQRHGIDRQQYLPQ
>NZ_CP053986.1|WP_082775767.1|340270_342229_-|sensor-histidine-kinase
MSRPDFSPPHASQAGEPPSLSVPRRRKHAWPWRVAAILLGVGVVFGVLHAATLWARDGALKNAATQARGTAQVNAALLRNNLDKFRALPFVLTRDVDVRAALQNPAPGQIESLDEKLDTLSRGVGASAIYVLDKKGWAIAASNWREPATFVGVDYQFRPYFQGAVTHGSAEHFALGTISHEAGLYLSRRVDDVGGAMLGVVVLKVDFRELEADWRQSNAPIFVTDEHGVVLLGSIADWRFDVLAPLPPGLAQTLRTSLQFGDARFQPLPVQPPLQAVSTGQLVRADTALPQIPAAAPLLHTTLPIVESPGWTLHLLSPVQAAINQATANAQLGALLAQSALAALIGIVLLRRHRQRERAHQQAAIHEQLTSLVDERTSQLLRVNEQLVDEMDERQRTAARLHTMQEELVQASKLALLGQVAAGVAHEINQPVAAIRAYADNAAEFLRRHDDGSARENLGTIAALTDRIGHITGELRAFSRKAGASVGPTSLKDCLEGALLLVGPRARRQGVALQRPPEMQNDLVQANRIRLEQVLVNLLQNALEALEGRTDGRIVITQQDLGATIRIQVADNGPGLSAQARARLFTPFHTTKPEGLGLGLVICRDIVAEFGGELNVAPPASASSDSQAPDGGALFVLTLRKAPGQDTASSPS

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Crispr_ID: NZ_CP053986_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053986_2

2798405-2798517

Orphan

Consensus_repeat	Method
CGCCTTGGGGCGGCCCGGCGGCGGAGGGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP053986_2

>merge|NZ_CP053986|2|2798405-2798517|CRISPRCasFinder
CGCCTTGGGGCGGCCCGGCGGCGGAGGGGAGCCCCCACGCTGCGCGCGCGGAGCGCGCTTGCTGCCCCCCGAGGGGGCGCCCCTCGCCTTGGGGCGGCCCGGCGGCGAGGGGG

>NZ_CP053986|2|2|2798405-2798517|CRISPRCasFinder
CGCCTTGGGGCGGCCCGGCGGCGGAGGGG	AGCCCCCACGCTGCGCGCGCGGAGCGCGCTTGCTGCCCCCCGAGGGGGCGCCCCT
CGCCTTGGGGCGGCCCGGCGGCGAGGGGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053986.1\|WP_062685179.1\|2796458_2796911_+\|NUDIX-domain-containing-protein	unknown	unknown	gnl\|CDD\|239522
NZ_CP053986.1\|WP_062685182.1\|2791289_2793551_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|273391
NZ_CP053986.1\|WP_062685184.1\|2788184_2789852_-\|glucose-6-phosphate-isomerase	unknown	unknown	gnl\|CDD\|234679
NZ_CP053986.1\|WP_062684099.1\|2803319_2804612_+\|O-antigen-ligase-family-protein	unknown	unknown	gnl\|CDD\|377422
NZ_CP053986.1\|WP_062685183.1\|2789865_2791269_-\|phosphomannomutase/phosphoglucomutase	unknown	unknown	gnl\|CDD\|100091
NZ_CP053986.1\|WP_062684102.1\|2798931_2800041_+\|GDP-mannose-4,6-dehydratase	unknown	unknown	gnl\|CDD\|224014
NZ_CP053986.1\|WP_062684108.1\|2802389_2803292_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133055
NZ_CP053986.1\|WP_062684107.1\|2807189_2808437_+\|glycosyltransferase-WbuB	unknown	unknown	gnl\|CDD\|236670
NZ_CP053986.1\|WP_062684100.1\|2801052_2802369_+\|oligosaccharide-flippase-family-protein	unknown	unknown	gnl\|CDD\|240533
NZ_CP053986.1\|WP_062685185.1\|2787120_2788170_-\|UDP-glucose-4-epimerase-GalE	unknown	unknown	gnl\|CDD\|187558
NZ_CP053986.1\|WP_062684096.1\|2806632_2807193_+\|colanic-acid-biosynthesis-acetyltransferase-WcaF	unknown	unknown	gnl\|CDD\|236703
NZ_CP053986.1\|WP_062684097.1\|2805748_2806636_+\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|133005
NZ_CP053986.1\|WP_062685180.1\|2794999_2796409_+\|undecaprenyl-phosphate-glucose-phosphotransferase	unknown	unknown	gnl\|CDD\|274396
NZ_CP053986.1\|WP_062684109.1\|2798558_2798921_+\|VanZ-family-protein	unknown	unknown	gnl\|CDD\|227939
NZ_CP053986.1\|WP_062684098.1\|2804604_2805735_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|340839
NZ_CP053986.1\|WP_062685187.1\|2785113_2785932_-\|NAD-dependent-protein-deacetylase	unknown	unknown	gnl\|CDD\|235415
NZ_CP053986.1\|WP_062685181.1\|2793612_2794749_-\|polysaccharide-biosynthesis/export-family-protein	unknown	unknown	gnl\|CDD\|237903
NZ_CP053986.1\|WP_062684101.1\|2800047_2801001_+\|GDP-L-fucose-synthase	unknown	unknown	gnl\|CDD\|187550
NZ_CP053986.1\|WP_062685186.1\|2785987_2786935_-\|serine-acetyltransferase	unknown	unknown	gnl\|CDD\|200082
NZ_CP053986.1\|WP_062685178.1\|2796916_2798347_+\|mannose-1-phosphate-guanylyltransferase/mannose-6-phosphate-isomerase	unknown	unknown	gnl\|CDD\|273648

Protein	Function_ID	Function_description	E-value
NZ_CP053986.1\|WP_062685179.1\|2796458_2796911_+\|NUDIX-domain-containing-protein	gnl\|CDD\|239522	cd03430, GDPMH, GDP-mannose glycosyl hydrolase (AKA GDP-mannose mannosyl hydrolase (GDPMH)) is a member of the Nudix hydrolase superfamily. This class of enzymes is unique from other members of the superfamily in two aspects. First, it contains a modified Nudix signature sequence. The slight changes to the conserved sequence motif, GX5EX7REUXEEXGU, where U = I, L or V), are believed to contribute to the removal of all magnesium binding sites but one, retaining only the metal site that coordinates the pyrophosphate of the substrate. Secondly, it is not a pyrophosphatase that substitutes at a phosphorus; instead, it hydrolyzes nucleotide sugars such as GDP-mannose to GDP and mannose, cleaving the phosphoglycosyl bond by substituting at a carbon position. GDP-mannose provides mannosyl components for cell wall synthesis and is required for the synthesis of other glycosyl donors (such as GDP-fucose and colitose) for the cell wall. The importance of GDP-sugar hydrolase activities is thus closely related to the regulation of cell wall biosynthesis. Enzymes in this family are believed to regulate the concentration of GDP-mannose and GDP-glucose in the bacterial cell wall.	1.51133e-60
NZ_CP053986.1\|WP_062685182.1\|2791289_2793551_-\|AAA-family-ATPase	gnl\|CDD\|273391	TIGR01005, Putative_tyrosine-protein_kinase_EpsB, exopolysaccharide transport protein family. The model describes the exopolysaccharide transport protein family in bacteria. The transport protein is part of a large genetic locus which is associated with exopolysaccharide (EPS) biosynthesis. Detailed molecular characterization and gene fusion analysis revealed atleast seven gene products are involved in the overall regulation, which among other things, include exopolysaccharide biosynthesis, property of conferring virulence and exopolysaccharide export. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	5.75334e-165
NZ_CP053986.1\|WP_062685184.1\|2788184_2789852_-\|glucose-6-phosphate-isomerase	gnl\|CDD\|234679	PRK00179, pgi, glucose-6-phosphate isomerase; Reviewed.	0
NZ_CP053986.1\|WP_062684099.1\|2803319_2804612_+\|O-antigen-ligase-family-protein	gnl\|CDD\|377422	pfam04932, Wzy_C, O-Antigen ligase. This group of bacterial proteins is involved in the synthesis of O-antigen, a lipopolysaccharide found in the outer membrane in gram-negative bacteria. This family includes O-antigen ligases such as E. coli RfaL.	1.47283e-08
NZ_CP053986.1\|WP_062685183.1\|2789865_2791269_-\|phosphomannomutase/phosphoglucomutase	gnl\|CDD\|100091	cd03089, PMM_PGM, The phosphomannomutase/phosphoglucomutase (PMM/PGM) bifunctional enzyme catalyzes the reversible conversion of 1-phospho to 6-phospho-sugars (e.g. between mannose-1-phosphate and mannose-6-phosphate or glucose-1-phosphate and glucose-6-phosphate) via a bisphosphorylated sugar intermediate. The reaction involves two phosphoryl transfers, with an intervening 180 degree reorientation of the reaction intermediate during catalysis. Reorientation of the intermediate occurs without dissociation from the active site of the enzyme and is thus, a simple example of processivity, as defined by multiple rounds of catalysis without release of substrate. Glucose-6-phosphate and glucose-1-phosphate are known to be utilized for energy metabolism and cell surface construction, respectively. PMM/PGM belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the phosphoglucomutases (PGM1 and PGM2). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.	0
NZ_CP053986.1\|WP_062684102.1\|2798931_2800041_+\|GDP-mannose-4,6-dehydratase	gnl\|CDD\|224014	COG1089, Gmd, GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane].	0
NZ_CP053986.1\|WP_062684108.1\|2802389_2803292_+\|glycosyltransferase	gnl\|CDD\|133055	cd06433, GT_2_WfgS_like, WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.	1.30814e-76
NZ_CP053986.1\|WP_062684107.1\|2807189_2808437_+\|glycosyltransferase-WbuB	gnl\|CDD\|236670	PRK10307, PRK10307, colanic acid biosynthesis glycosyltransferase WcaI.	0
NZ_CP053986.1\|WP_062684100.1\|2801052_2802369_+\|oligosaccharide-flippase-family-protein	gnl\|CDD\|240533	cd13128, MATE_Wzx_like, Wzx, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins. Escherichia coli Wzx and related proteins from other gram-negative bacteria are thought to act as flippases, assisting in the membrane translocation of lipopolysaccharides including those containing O-antigens. Proteins from the MATE family are involved in exporting metabolites across the cell membrane and are often responsible for multidrug resistance (MDR).	6.50707e-23
NZ_CP053986.1\|WP_062685185.1\|2787120_2788170_-\|UDP-glucose-4-epimerase-GalE	gnl\|CDD\|187558	cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	9.73796e-175
NZ_CP053986.1\|WP_062684096.1\|2806632_2807193_+\|colanic-acid-biosynthesis-acetyltransferase-WcaF	gnl\|CDD\|236703	PRK10502, PRK10502, putative acyl transferase; Provisional.	3.5223e-99
NZ_CP053986.1\|WP_062684097.1\|2805748_2806636_+\|glycosyltransferase-family-2-protein	gnl\|CDD\|133005	cd02511, Beta4Glucosyltransferase, UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.	4.70695e-51
NZ_CP053986.1\|WP_062685180.1\|2794999_2796409_+\|undecaprenyl-phosphate-glucose-phosphotransferase	gnl\|CDD\|274396	TIGR03023, Sugar_transferase., Undecaprenyl-phosphate glucose phosphotransferase. This family of proteins encompasses the E. coli WcaJ protein involved in colanic acid biosynthesis, the Methylobacillus EpsB protein involved in methanolan biosynthesis, as well as the GumD protein involved in the biosynthesis of xanthan. All of these are closely related to the well-characterized WbaP (formerly RfbP) protein, which is the first enzyme in O-antigen biosynthesis in Salmonella typhimurium. The enzyme transfers galactose from UDP-galactose (NOTE: not glucose) to a polyprenyl carrier (utilizing the highly conserved C-terminal sugar transferase domain, pfam02397) a reaction which takes place at the cytoplasmic face of the inner membrane. The N-terminal hydrophobic domain is then believed to facilitate the "flippase" function of transferring the liposaccharide unit from the cytoplasmic face to the periplasmic face of the inner membrane. Most of these genes are found within large operons dedicated to the production of complex exopolysaccharides such as the enterobacterial O-antigen. Colanic acid biosynthesis utilizes a glucose-undecaprenyl carrier, knockout of EpsB abolishes incorporation of UDP-glucose into the lipid phase, and the C-terminal portion of GumD has been shown to be responsible for the glucosyl-1-transferase activity.	0
NZ_CP053986.1\|WP_062684109.1\|2798558_2798921_+\|VanZ-family-protein	gnl\|CDD\|227939	COG5652, COG5652, Predicted integral membrane protein [Function unknown].	1.70127e-05
NZ_CP053986.1\|WP_062684098.1\|2804604_2805735_+\|glycosyltransferase	gnl\|CDD\|340839	cd03811, GT4_GT28_WabH-like, family 4 and family 28 glycosyltransferases similar to Klebsiella WabH. This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.	4.02036e-77
NZ_CP053986.1\|WP_062685187.1\|2785113_2785932_-\|NAD-dependent-protein-deacetylase	gnl\|CDD\|235415	PRK05333, PRK05333, NAD-dependent protein deacetylase.	1.37013e-169
NZ_CP053986.1\|WP_062685181.1\|2793612_2794749_-\|polysaccharide-biosynthesis/export-family-protein	gnl\|CDD\|237903	PRK15078, PRK15078, polysaccharide export protein Wza; Provisional.	9.34224e-89
NZ_CP053986.1\|WP_062684101.1\|2800047_2801001_+\|GDP-L-fucose-synthase	gnl\|CDD\|187550	cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs. GDP-fucose synthetase (aka 3, 5-epimerase-4-reductase) acts in the NADP-dependent synthesis of GDP-fucose from GDP-mannose. Two activities have been proposed for the same active site: epimerization and reduction. Proteins in this subgroup are extended SDRs, which have a characteristic active site tetrad and an NADP-binding motif, [AT]GXXGXXG, that is a close match to the archetypical form. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	3.5531e-174
NZ_CP053986.1\|WP_062685186.1\|2785987_2786935_-\|serine-acetyltransferase	gnl\|CDD\|200082	TIGR01172, Serine_acetyltransferase, serine O-acetyltransferase. Cysteine biosynthesis [Amino acid biosynthesis, Serine family].	6.36061e-54
NZ_CP053986.1\|WP_062685178.1\|2796916_2798347_+\|mannose-1-phosphate-guanylyltransferase/mannose-6-phosphate-isomerase	gnl\|CDD\|273648	TIGR01479, Mannose-1-phosphate_guanylyltransferase, mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase. This enzyme is known to be bifunctional, as both mannose-6-phosphate isomerase (EC 5.3.1.8) (PMI) and mannose-1-phosphate guanylyltransferase (EC 2.7.7.22) in Pseudomonas aeruginosa, Xanthomonas campestris, and Gluconacetobacter xylinus. The literature on the enzyme from E. coli attributes mannose-6-phosphate isomerase activity to an adjacent gene, but the present sequence has not been shown to lack the activity. The PMI domain is C-terminal. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides].	0

>NZ_CP053986.1|WP_062685178.1|2796916_2798347_+|mannose-1-phosphate-guanylyltransferase/mannose-6-phosphate-isomerase
MTNPPPPYRAVILCGGSGSRLWPLSRELLPKQFIRLTDDRSLLQNTLLRLGSAGAENRPTLVCNDAHRYIAAEQALELGIKDAEVILEPFARNTAPAIAAATLRAMRDGEDPVMLIMPSDHVLEDGEVLRAAFAEAYQAALQGALVTFGITPTAPLSGYGYIQADEPGAMGPARRVKRFVEKPSPEVAQRFIEDGGYYWNSGMFAFQASVFLSEMARLAPKILEQVQAAVAIGHGENALFHLDGPSFEACPSDSMDYAIMERTDSAVVIPLSASWSDVGAWDAVWGIAQKTVEGNSTTGDVMVEDSRNCLIHSTSRLVASVGLDDIVVIETADAVLVAHKSRSQDVKRLVEIFKTQHRSELNHHREVQRPWGSYDSVGQGPRYQVKRITVKPGARLSSQMHHHRAEHWIVVSGTARIYNGDKQYLLTENQSTYIPLGEIHSLENPGKIPLEIIEVQSGAYLGEDDIVRFQDMYGRV
>NZ_CP053986.1|WP_062685179.1|2796458_2796911_+|NUDIX-domain-containing-protein
MLAGADFRRAVEMLPLVSIDLLLRDGSGRYLTGLRANPPAQGAWFVPGGRIRKNETLRDALRRIARDELGLPVPDQAWQPRGVYEHFYGTNFAGEAGRSTHYVVLAYEAEIPLDIASLPQAQHRSYRWQPAEAIAADPGVHPYTQAYFKE
>NZ_CP053986.1|WP_062685180.1|2794999_2796409_+|undecaprenyl-phosphate-glucose-phosphotransferase
MEPSQTDTSARFSGASYIYRLLDAAIVITCGLTATGLKFSDDALADPPQIHLFLVYLCGLGVIAIFPAFRLYVSWRGRRLADLVARSLAAWAMVFALGICISFLMHQTAAISRIWAATWFIMTALTLAGVRIAVYAALGAARDRGLDRKRVLLVGFGALGHDLWRRVERYRGTGYEVAGIYAEPHENLPPQVRRLHELEELHAFVNENKVREIWIVLPMEAGQELREVLYHLRNDLVDIRWIPDVMSIQLLGHQIGEFLGLPAIQLNSLPAAGVRGLAKEVFDRSFAFCALIGLSPLMLTVALLVKATSRGPVFFTQPRLGVDGKVFHVYKFRTMTVHQEQGVVTQATRNDTRVTRIGGFLRRTSLDELPQFLNVLMGDMSVVGPRPHALEHNELYKDLVQRYMMRHRVKPGITGWAQVNGLRGQTDTLRKMSDRVEYDIYYIQHWTFRMDLLIIARTAISGWTGRNVY
>NZ_CP053986.1|WP_062685181.1|2793612_2794749_-|polysaccharide-biosynthesis/export-family-protein
MTTFFGTLSRAIAAIALVSSLGACALSPGMTFDANQLADPLDPNSKAEIREITPSLVLEDQRAREALLDNAGVDRLYGKSGPYIIGPGDILSVVVWDHPELVLPTQTYAIGSGVTELAIGDTASGIPGYTVSSTGYIQFPYAGLLKVAGLTELQARNLIVNSSGKYIQDPQITVRVLGYRSKRVYVDGEVTTPGTVAINDIPMTLLEAINRAGGILPTGDRSAVYVIRDGRRTRVNLPALIERGQDLNQVLLKSGDIVRVTPRDDSKVFVMGEVTLPTAAVMRDGRMSLTEALGLAGGPNQLTSNPSQVFVVRSTEQATPLVFHLNAGSPQALAVAEKFELQPKDVVFVDSAGLVRWNRFISNLFPSAQTVQTVKAID
>NZ_CP053986.1|WP_062685182.1|2791289_2793551_-|AAA-family-ATPase
MSLPIESFEPSVPARQQETPLSSHVDAIFSNRWMIIAITLLALFGALAYVMVTPKVFSADIIVQVEEELPQGQGRSLLGDVSTMFDTKAETSGEMEVLRSRMVVGPAVDKFLLYIHAKPRYFPVVGEWLAQRYESLPYPSSLPRGGYAWGGEAIAISQLDVPNEWLGKPFRVTTLGDGRYTLSDKLTGATFNGTVGKPEHFLLPGGGAMDVHIDALTGRPGTEFTVSRSSRLAAIEDVQARLGIFERGRTSGVIGVTLEGNDPALTTAVLNQIGQEYVQQNVNRKSAQAEKSLVFLEQQLPVLKGELDAAETKYNTLRNKRGTIDLSEEAKLILAQSVDAQTKVMELRSKRQEMITRFAPTHPSIVALDRQIAGLTGDVNRIGNNIRQLPDLEQDVVRLVRDVRVNTELYTALLNNAQQLRLIRAGKVGNVRILDAAVQPDKPVRPKAAIIIGVATAFGLIFGMLCAFVRNALFGGLSEPDDVERHTGLPVLAAIPYSDMQDKLWRRSRRKNASVPALLAQSQGNAPPIESLRSFRNVLQASLRQSANNMVMFTGPVAGVGKSFLSANFAFIQGGVGKRVLLIDADFRKGQLNRYFGVPKEDGLFEVLSGTIPLSRVRKHSVSEGVDFIATGAVTFDPSELLASPVFGETLRELASQYDMVILDTAPVLSSPDAAVVGTHAAAVMVVVRSGMNTVGEIRETAKRLIQAGAPVDGVLFNGLKLLPERFGFRSKYGNYRYSRAAYYGDFKQNGPK
>NZ_CP053986.1|WP_062685183.1|2789865_2791269_-|phosphomannomutase/phosphoglucomutase
MHGTFGWDTPQILDAVFKAYDIRGTVPDEIDARFAHSLGMAAGTRARELGARSMVVGRDGRLSSVELAAALQAGLRSAGMHVIDIGMATTPMVYFATRLMDTGSGIAVTGSHNPPAHNGFKIVLDGASLYGEGITALRDAMRLPIESAGVAGGRTQMQILPCYAARLMGDIRMARPMKIAIDCGNGVAGAVAPSLFRALGCEVTELFCEVDGTFPAHHPDPADPQNLQDLIYCLRYSDCEVGLAFDGDGDRLGVVTKSGQIIWPDRQLILFARDVLSRNPGAEILYDVKCSRHVARAITEAGGKPTMCRTGHSLIKARMRETGALLAGEMSGHIFFKERWYGFDDGIYAAARLLEILSAAPDPSALLENLPQSCATPEIKLGTAEGEQFDLVEALRAQGEFPGAVSISNLDGVRVDYADGFGLARPSNTTPTVVLRFEGDTVAALARIEEDFRNAFRRIAPHVRLPF
>NZ_CP053986.1|WP_062685184.1|2788184_2789852_-|glucose-6-phosphate-isomerase
MGKAKYAIEALRANSGLADSPEWQAFAQAAQGAELDAGALKVIEAAGLCVDLTMQRQSPALDAAALSLLQARGLADARRALFAGDPVNWTEGKPAWHTALRAGRTREQPDGQDADSVCEHSRMTDFVRKVDQTADFSTVLHIGIGGSDWGPRLAIQAFGGPSQRRQIRFVSNIDGHAFHDAVAGLDPRRCLVVVSSKSFTTAETLHNARAAIAWLKHGGVADVSEHLAAVTANPSAARALGVPASQVFKMCDWVGGRYSVWSVAGLSIALTVGADVLIGMRAGAEAMDQHFQQAPFASNAPVQLALSGLVNCSVLGHNSLNIAAYSARLLHLVTYLQQLEMESLGKRVAGDGAAVGVPTAPIIWGMPGTDGQHTFFQWLHQSEDGAPVDFIASLQGHADSPDAHRMLLANCLAQRQALLRGKCLEQALLDVAHIDDQERALSLAQHMVHPGGRPSTLIVLRQLDPRGLGALLALYEHKVFVQSVVWGINPFDQWGVELGKRLATGIERELAVPVSAGLVDWGHDASTSYWIDRYRSHAQAPRPRHAWVPGVAAHL
>NZ_CP053986.1|WP_062685185.1|2787120_2788170_-|UDP-glucose-4-epimerase-GalE
MPDLHVLVTGGAGYIGTHTLVAMLAAGQRPLVLDDFSNGSREAVRRVERLCGTEIPLVEGDIRSPGMVASVLAASAARGAPVEAVLHLAGSKAVGESVADPLKYYDNNVGGSMALLRAMREAGVRRLVFSSSATVYGEPQYLPFTEAHPLAPTNPYGRSKRMVEDMLRDLCAADPAFSAVTLRYFNPIGAHESGQIGESPRDTPNNLFPFITQVAVGRQPCLRVFGDDYDTVDGTGVRDYLHVMDLAQGHVRALAYSADHPGFVAVNLGTGQGTSVLELVRAFERVNGCRIPLLAQPRRPGDIERMWADPALAASLLGWRSTHDVDAMCADGWRWQQGNPQGYEPDAGA
>NZ_CP053986.1|WP_062685186.1|2785987_2786935_-|serine-acetyltransferase
MSGPTYIAPAHWNLDSIVSGLREARVAWRGPRGRLREDAGLREFPSQESLRQIIKDLCGALFPMRLGPIDLREEVEDFYVGHTIGAALDALLHQVCLELQYVGRPEQVASSGTRQRAIDIVREFGAELPRVRAALDLDVTAAYQGDPAAHSVDEVLLCYPGVSAMIHHRLANVLYRLGVPMLARMVAEIAHADTGIDIHPGATIGSSFFIDHGTGVVIGETAIIGDRVRLYQMVTLGAKRFPPGENGELKKGLARHPLIEDDVVIYAGATILGRVTIGKGSTIGGNVWLTRSVPPGSNVTQASLVSDMPDCGLGG
>NZ_CP053986.1|WP_062685187.1|2785113_2785932_-|NAD-dependent-protein-deacetylase
MDTRVSDLAALRGFVDRHPRLFVLTGAGVSTDSGIPDYRDTEGEWKRKPPMTLQTFMGGEPARARYWARSMVGWRRFGHVRPNASHRALARLESQGRVGLLVTQNVDGLHEAAGSREVVDLHGRLDQVRCMACDWRGDRHAWQEALQDANPDWTQLDASDAPDGDADLDGLDFTRFRVPPCPRCGGVVKPDVVFFGETVPRERVDRANAGLMSADAVLVLGSSLMVYSGYRFVTAASRNGMPIAAVNLGRTRADNMLTLKVELPCAVALDAL
>NZ_CP053986.1|WP_062684109.1|2798558_2798921_+|VanZ-family-protein
MARLCLPVAGLFFLVLVTVGNLPGLASEMSDAFGDKRLHLAAYAFLTGLIYMSVNRRPALVAMLAITALGALDESIQSFFPYRQAELLDLLADISAAGATVISLHIGTAAFGSFRAVTKS
>NZ_CP053986.1|WP_062684102.1|2798931_2800041_+|GDP-mannose-4,6-dehydratase
MPKRALITGVTGQDGSYLAEFLLAKGYEVHGIKRRASLFNTARIDHLYQDPHDQPRNFVLHHGDMTDSCSLIRIVQSVQPDEIYNLAAQSHVGVSFEEPEYTANADGLGTLRLLEAIRILKLENKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAAAKLYAYWISVNYREAYGMYACNGILFNHESPKRGETFVTRKITRGLARIVLGLQECLYLGNLSALRDWGHARDYVEMQWLMLQQDTPEDYVIATGMQYSVREFINTAARELGILLAWEGEGLEETATVLFSPVHDVKPGQVIVRVDPRYFRPTEVETLLGDPTKAREKLGWSPRISFAELVKEMIESDLRDARRDALVEQNGYEIYAYKE
>NZ_CP053986.1|WP_062684101.1|2800047_2801001_+|GDP-L-fucose-synthase
MTNLEQRVFVAGHRGMVGAAITRELHRRGYGNVLTRSREELDLENQNQVHRFFSTTPVDVVYLAAAKVGGILANQTHPVDFLYKNLMIQCNVIRAAYAAGVRKLLFLGSSCIYPREAPQPIREDALLTGPLESTNEPYAIAKIAGLKLCEAYQRQYGARFICAMPTNLYGQHDNYDLHSSHVLPALIRKFHEGRESGQDSVTIWGTGTPLREFLYVDDLAQACVMLMEHPDAEGIYNIGAGQDISIADLARLVARVVGYTGNIVYDTGKPDGTPRKLMDSSRVQALGWKPEISLTHGITLAYGHFLRERTQHALPVA
>NZ_CP053986.1|WP_062684100.1|2801052_2802369_+|oligosaccharide-flippase-family-protein
MLGFLRKHIAGNASFWGLVEYGIGPVAALVALPILFRQLGTVGFGQYSMIIALAGFGNAANLGAAVTATKLVSERLHEPGGAYRAAGVSMSLIGCALGVVTLAALLLWGAVGLGWPGATFGGVAVTMLALPALAIYLTQQYDQLFSGCLKGREDFRATALCEVFSRSGTMALACVTAWLTASPTWTGLAQALGLLVAGSIKMGVFSRAYGRLLVRPVRDRGAMMDAFRFSRWSWLNSLSALAFGSVDRVLVGSLMGPAALAIYTVGVQVGQIIHTASVAIFQKAMPRVSRLSASPPYPGAAEREIRRMMLWNLALSAGATLAVLAVSRPLLNVLLSASVAQDHLGTFQLLIVASGLLSLNAAAHFSLLGLGNSRAVAILNGLGGLAMLCVMAGLVHVAGEHAAAWGRMAYAAITLAGVAFAIRQSRPDFPGALPAATR
>NZ_CP053986.1|WP_062684108.1|2802389_2803292_+|glycosyltransferase
MRKRHNEYSRQLIDFVRELRPPAPIAGGLMPKVTIVTPSFNQARFLERTILSVLNQGYPRLEYIIMDGGSTDGSVDIIRKYERYLTYWESTPDRGQSHAINKGFERATGDYVGWQNSDDLYFPGALRKLGSAASRGRAPIVSGNLFVADADNRIFRKIHYTPVNRGTLTVVKASIPNQSAIFRRDLLQKYGLLQESMRYCMDLELWSRLLREGKNLIVPDAMGVYTAHDETKTALMQDVLLEEREQIVTRIRRTEPGLGRLFELSCRASKVAAHARQGDLSYLFEKLTTKIFGRDDWASH
>NZ_CP053986.1|WP_062684099.1|2803319_2804612_+|O-antigen-ligase-family-protein
MRPHRRLSTLHLLGMFAFTALALNDDHFVLGVGSFKLSPFDVIFVAMLAVKALRLAEPSAYALPRGVLGMLLGIQTLSVIYLLLVSLDHPGIETGDVARDLRIVFYFLCTPFLCYKDIDSPAAYAVLQKYIVAACLAVATLMLLEQAQGFSVANPLRNVRLGVWAIPFGVVSLLYFRRTLNVSGPKAYALTVYMLLALVFSLNRSQYLQLAISVFIAVLLGAGPEIRRRAVLIFAPAAVAGVLVFASIGYLDVLTNRIFSVERLDEDSSYGARIQEMQGQMDSFAESPVFGKGAGFRSWVMGENGFELSTFAHNSWAFYLMKFGVVGTTMIMLPPLLILLLTLLRRYAHPGLELHRRYLLSTAPIYIFIDSLSGGLAYAPKTAFTGFLLCYCLSLMRNAQIMPVPSITPPAPSPRPAAARRAPPRVIPHA
>NZ_CP053986.1|WP_062684098.1|2804604_2805735_+|glycosyltransferase
MPDVLFVAPDLHGGVGRCVAFIVDALPEQGVDSALFLLRSRNREYPVSNPKVTRALPVIESPAKLRLMLPVAFMRLLRQIRRDKPAIVCSHGLLCNMLVVLAKKLLRGNFSTVAFEHSSPAIHYGASRMRRLKCWLVSQTYRRHDAVVGVSRGVKEDLVSMFPPLRGKVHTIYNGVPLDNVRQQGANRAQEAEGQAPYHVVAVGRLEAVKDYATLIDAAALLDDPGIAFTILGEGSEHAALQKRIDDHGSRTPVTLAGHIDNPFPVIAGAGAFALTSVRESFGNVLVEALCLGVPVISTDCPHGPAEILDAGRYGLLVPVGDAAALAAAVRRLAYDGETRERLAAQGPERADAFSLERHCRNVIALFQPLMQRGTP
>NZ_CP053986.1|WP_062684097.1|2805748_2806636_+|glycosyltransferase-family-2-protein
MQKIPVSVVVMTKNEERNIAKCLKALVDFDEVFVVDSNSTDATCAMATALGAKVSNFNWNGKYPKKKQWCLEQLPFSHPVVLYVDADEEMTPKLAAEIREALPRFAAGAGGAFVPFDYVFCGKKLEHGHRVYKLALLARGRSRFLDYDDLDVAHMWEVEGHYQPQVQGDTFALRQRMVHNDHDSLFHYFDKHNRYSDWEANLRTKGLMNDPREANVGARALLKRIFQAMPFKAPISFLHSYVFKLGFLDGKAGYDYAVARAMYYWQIRIKTEELQKARQASAAAARDDAVAGAAK
>NZ_CP053986.1|WP_062684096.1|2806632_2807193_+|colanic-acid-biosynthesis-acetyltransferase-WcaF
MSALQRLDRFALAPGQRGRSALTVQLWWMVQGTLFRWSPQVAYGFRRWLLRCFGARVGRKVLIRPTATVTYPWKVEIGDYAWIGDDAVIYSLGPIQIGAHAVVSQRSYLCAADHDAAQPEFPLRERAVRVEEGAWVATDVFVGPGVTIGREAVIGARSSVFRNMPPAMVCHGNPCRPVRPRKAGAP
>NZ_CP053986.1|WP_062684107.1|2807189_2808437_+|glycosyltransferase-WbuB
MKILIYGINYAPELTGIGKYSAEMAEWLAARGHEVSVVTAPPYYPQWEVQPGYRAGRYARETRRGVTVRRAPLWVPARPGGLKRLVHLASFALSSLPSLLRAAAGRPDIILVVEPALFCAPAAWLAARLCGARAWLHIQDYEVDAAFELGLLKGAGLRGAVRRAERWLMRRFDRVSTISNRMLDLALAKGVDPGRVVLLPNWIDVDAIAPGEGGDYRAELGIPESAIVALYSGNMGGKQGLQTLADVARRLSREHRVWFVFCGQGPERAPLEAQCQGLPRVRFLDLQPAERLGELLNTADIHLLPQRAGAADLVMPSKLTGMLASGRPVVCGAAPGTELAAVVTRCGLVTPPEDGEAMAEAVRKLSYNARLRDTLGVAARQYALAHLHVDTVLAAAEREFAAIAASKGKPAGAGA

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Crispr_ID: NZ_CP053986_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053986_3

2873823-2873928

Orphan

Consensus_repeat	Method
TCGCAGGGCCGCCCCAAGACAAAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP053986_3

>merge|NZ_CP053986|3|2873823-2873928|CRISPRCasFinder
TCGCAGGGCCGCCCCAAGACAAAAACGCCCCCTTGGGGGGCAGCAAGCAAGCGAAGCGCGCAGCGTGGGGGCCATTTTCTTTCGCAGGGCCGCCCCAAGACAAAAA

>NZ_CP053986|3|3|2873823-2873928|CRISPRCasFinder
TCGCAGGGCCGCCCCAAGACAAAAA	CGCCCCCTTGGGGGGCAGCAAGCAAGCGAAGCGCGCAGCGTGGGGGCCATTTTCTT
TCGCAGGGCCGCCCCAAGACAAAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053986.1\|WP_042794482.1\|2869434_2869944_+\|peptidylprolyl-isomerase	unknown	unknown	gnl\|CDD\|182734
NZ_CP053986.1\|WP_062684055.1\|2866884_2868339_-\|cysteine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234705
NZ_CP053986.1\|WP_062681296.1\|2883726_2884512_-\|inositol-monophosphatase	unknown	unknown	gnl\|CDD\|238817
NZ_CP053986.1\|WP_062684053.1\|2869936_2870704_+\|UDP-2,3-diacylglucosamine-diphosphatase	unknown	unknown	gnl\|CDD\|235420
NZ_CP053986.1\|WP_062681288.1\|2872101_2873685_-\|TerC-family-protein	unknown	unknown	gnl\|CDD\|223930
NZ_CP053986.1\|WP_062681290.1\|2877075_2878992_+\|TAT-dependent-nitrous-oxide-reductase	unknown	unknown	gnl\|CDD\|235082
NZ_CP053986.1\|WP_062681291.1\|2878997_2880296_+\|nitrous-oxide-reductase-family-maturation-protein-NosD	unknown	unknown	gnl\|CDD\|275079
NZ_CP053986.1\|WP_062681295.1\|2882562_2883561_+\|FAD:protein-FMN-transferase	unknown	unknown	gnl\|CDD\|224394
NZ_CP053986.1\|WP_082775736.1\|2874700_2876959_+\|regulatory-protein-NosR	unknown	unknown	gnl\|CDD\|226417
NZ_CP053986.1\|WP_062684057.1\|2864094_2865159_-\|tRNA-lysidine(34)-synthetase-TilS	unknown	unknown	gnl\|CDD\|238950
NZ_CP053986.1\|WP_062684058.1\|2862652_2863918_-\|aspartate-kinase	unknown	unknown	gnl\|CDD\|235843
NZ_CP053986.1\|WP_075873352.1\|2884643_2885411_+\|RNA-methyltransferase	unknown	unknown	gnl\|CDD\|223639
NZ_CP053986.1\|WP_062681292.1\|2880292_2881192_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP053986.1\|WP_062684054.1\|2868616_2869300_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP053986.1\|WP_062681294.1\|2882015_2882519_+\|nitrous-oxide-reductase-accessory-protein-NosL	unknown	unknown	gnl\|CDD\|226764
NZ_CP053986.1\|WP_062681293.1\|2881188_2882019_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|372253
NZ_CP053986.1\|WP_062684056.1\|2865220_2866186_-\|acetyl-CoA-carboxylase-carboxyltransferase-subunit-alpha	unknown	unknown	gnl\|CDD\|235580
NZ_CP053986.1\|WP_062684103.1\|2866222_2866864_-\|DNA-3-methyladenine-glycosylase-2-family-protein	unknown	unknown	gnl\|CDD\|223200
NZ_CP053986.1\|WP_062681287.1\|2871219_2872083_-\|undecaprenyl-diphosphate-phosphatase	unknown	unknown	gnl\|CDD\|234712
NZ_CP053986.1\|WP_062681289.1\|2873967_2874417_-\|azurin	unknown	unknown	gnl\|CDD\|259989

Protein	Function_ID	Function_description	E-value
NZ_CP053986.1\|WP_042794482.1\|2869434_2869944_+\|peptidylprolyl-isomerase	gnl\|CDD\|182734	PRK10791, PRK10791, peptidylprolyl isomerase B.	6.09611e-89
NZ_CP053986.1\|WP_062684055.1\|2866884_2868339_-\|cysteine--tRNA-ligase	gnl\|CDD\|234705	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated.	0
NZ_CP053986.1\|WP_062681296.1\|2883726_2884512_-\|inositol-monophosphatase	gnl\|CDD\|238817	cd01639, IMPase, IMPase, inositol monophosphatase and related domains. A family of Mg++ dependent phosphatases, inhibited by lithium, many of which may act on inositol monophosphate substrate. They dephosphorylate inositol phosphate to generate inositol, which may be recycled into inositol lipids; in eukaryotes IMPase plays a vital role in intracellular signaling. IMPase is one of the proposed targets of Li+ therapy in manic-depressive illness. This family contains some bacterial members of the inositol monophosphatase family classified as SuhB-like. E. coli SuhB has been suggested to participate in posstranscriptional control of gene expression, and its inositol monophosphatase activity doesn't appear to be sufficient for its cellular function. It has been proposed, that SuhB plays a role in the biosynthesis of phosphatidylinositol in mycobacteria.	3.90488e-113
NZ_CP053986.1\|WP_062684053.1\|2869936_2870704_+\|UDP-2,3-diacylglucosamine-diphosphatase	gnl\|CDD\|235420	PRK05340, PRK05340, UDP-2,3-diacylglucosamine hydrolase; Provisional.	2.1808e-113
NZ_CP053986.1\|WP_062681288.1\|2872101_2873685_-\|TerC-family-protein	gnl\|CDD\|223930	COG0861, TerC, Membrane protein TerC, possibly involved in tellurium resistance [Inorganic ion transport and metabolism].	1.73378e-97
NZ_CP053986.1\|WP_062681290.1\|2877075_2878992_+\|TAT-dependent-nitrous-oxide-reductase	gnl\|CDD\|235082	PRK02888, PRK02888, nitrous-oxide reductase; Validated.	0
NZ_CP053986.1\|WP_062681291.1\|2878997_2880296_+\|nitrous-oxide-reductase-family-maturation-protein-NosD	gnl\|CDD\|275079	TIGR04247, nitrous_oxide_maturation_protein_NosD, nitrous oxide reductase family maturation protein NosD. Members of this family include NosD, a repetitive periplasmic protein required for the maturation of the copper-containing enzyme nitrous-oxide reductase. NosD appears to be part of a complex with NosF (an ABC transporter family ATP-binding protein) and NosY (a six-helix transmembrane protein in the ABC-2 permease family). However, NosDFY-like complexes appear to occur also in species whose copper requiring enzymes are something other than nitrous-oxide reductase.	0
NZ_CP053986.1\|WP_062681295.1\|2882562_2883561_+\|FAD:protein-FMN-transferase	gnl\|CDD\|224394	COG1477, ApbE, Membrane-associated lipoprotein involved in thiamine biosynthesis [Coenzyme metabolism].	4.98328e-69
NZ_CP053986.1\|WP_082775736.1\|2874700_2876959_+\|regulatory-protein-NosR	gnl\|CDD\|226417	COG3901, NosR, Regulator of nitric oxide reductase transcription [Transcription].	1.49555e-157
NZ_CP053986.1\|WP_062684057.1\|2864094_2865159_-\|tRNA-lysidine(34)-synthetase-TilS	gnl\|CDD\|238950	cd01992, PP-ATPase, N-terminal domain of predicted ATPase of the PP-loop faimly implicated in cell cycle control [Cell division and chromosome partitioning]. This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This domain has a strongly conserved motif SGGXD at the N terminus.	1.39935e-62
NZ_CP053986.1\|WP_062684058.1\|2862652_2863918_-\|aspartate-kinase	gnl\|CDD\|235843	PRK06635, PRK06635, aspartate kinase; Reviewed.	0
NZ_CP053986.1\|WP_075873352.1\|2884643_2885411_+\|RNA-methyltransferase	gnl\|CDD\|223639	COG0565, LasT, rRNA methylase [Translation, ribosomal structure and biogenesis].	8.30416e-75
NZ_CP053986.1\|WP_062681292.1\|2880292_2881192_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	5.90895e-89
NZ_CP053986.1\|WP_062684054.1\|2868616_2869300_+\|hypothetical-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	1.04161e-11
NZ_CP053986.1\|WP_062681294.1\|2882015_2882519_+\|nitrous-oxide-reductase-accessory-protein-NosL	gnl\|CDD\|226764	COG4314, NosL, Predicted lipoprotein involved in nitrous oxide reduction [Energy production and conversion].	2.73892e-62
NZ_CP053986.1\|WP_062681293.1\|2881188_2882019_+\|ABC-transporter-permease	gnl\|CDD\|372253	pfam12679, ABC2_membrane_2, ABC-2 family transporter protein. This family is related to the ABC-2 membrane transporter family.	6.67026e-40
NZ_CP053986.1\|WP_062684056.1\|2865220_2866186_-\|acetyl-CoA-carboxylase-carboxyltransferase-subunit-alpha	gnl\|CDD\|235580	PRK05724, PRK05724, acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated.	0
NZ_CP053986.1\|WP_062684103.1\|2866222_2866864_-\|DNA-3-methyladenine-glycosylase-2-family-protein	gnl\|CDD\|223200	COG0122, AlkA, 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase [DNA replication, recombination, and repair].	5.03077e-54
NZ_CP053986.1\|WP_062681287.1\|2871219_2872083_-\|undecaprenyl-diphosphate-phosphatase	gnl\|CDD\|234712	PRK00281, PRK00281, undecaprenyl-diphosphate phosphatase.	3.87666e-112
NZ_CP053986.1\|WP_062681289.1\|2873967_2874417_-\|azurin	gnl\|CDD\|259989	cd13922, Azurin, Azurin is a redox partner for enzymes such as nitrite reductase or arsenite oxidase. Azurin is a bacterial blue copper-binding protein. It serves as a redox partner to enzymes such as nitrite reductase or arsenite oxidase. The copper of Azurin is tetrahedrally coordinated by a cysteine, 2 histidines, and a methionine residue. The electron transfer reactions are carried out with the Cu center transitioning between the oxidized Cu(II) form and the reduced Cu(I) form. Azurin can function as a tumor suppressor; it forms a complex with p53 that triggers apoptosis in various human cancer cells.	1.38549e-78

>NZ_CP053986.1|WP_062681288.1|2872101_2873685_-|TerC-family-protein
MEWLLDPTAWVGLLTLVVLEIVLGIDNLIFIAILADKLPPAQRDRARIMGLSLALIMRLGLLSVMSWLVTLTAPLFSIGPLSFSGRDLILMIGGLFLLFKGTMELHERLEGSQHGGSSGPRVYASFWVIVTQIVVLDAVFSLDSVITAVGMVDHLAIMMIAVIIAIGIMLLASKPLTRFVNAHPTVVVLCLGFLLMIGFSLLAEAFGFKVPKGYLYAAIGFSVAIEALNQVARRNLLKLDARRPMRERTASAVLRMLGKRPPADEPDLPSADGPSVPAFGVEERNMVSGVLTLAERSIRSIMTPRTDVSWINIDDDPETIRAQLTEAPHSFFPVCRGSLDEVLGIGRAKDLVADLITEGRVRRNRLRDPIIVHESIGILRLMDTLKRSRGQLVLVADEFGAIEGLVTPIDVFEAIAGEFPDEDELPDIVADGDNTWKIDGAADLHHVEQVLETEGLVDDAQDFSTLAGYLLSRFGHLPKPGDVCEYEIHHDHFRFEVLEMDGRRIALVRVEKRPQELHADDASLAND
>NZ_CP053986.1|WP_062681287.1|2871219_2872083_-|undecaprenyl-diphosphate-phosphatase
MTENALYLIKAFVLGIIEGLTEFIPVSSTGHLILVGDWINFESSQGKVFEVVIQLGSILAVMWVFRARLLRLVRGTLTGVPSEVAFTRNLIIAFLPAAVIGAIFIKSIKSVFYHPSVVVVTLVLGGLIMLYVERKTHHTPGDQPGAADDTASDERATARTLEQISWKQALGVGVAQCLAMIPGTSRSGATIIGGMIAGIQRKTATEFSFFLAMPTMLGAAVYDMYKNMELLTQHDLAGIAVGFVAAFLSAMVVVRAVLRFVANHTYRVFAWYRIVFGAVVAAWIFTR
>NZ_CP053986.1|WP_062684053.1|2869936_2870704_+|UDP-2,3-diacylglucosamine-diphosphatase
MNKISLPGPVWLASDLHLGPATPATSEAFLAFLEAAREEAAALLLPGDIFDAWIGDDVIRAAPPWLATALTALRDTAARIPVWLGRGNRDFLIGEELAQALGARLLPEPALLETDFGPILLTHGDEYCTDDAAYQQFRQMVRNPQWQAEFLAKTIPERLAMAQQARGESQAANQTKSMEIMDVNAGAVEQAFRDTGVRVLIHGHTHRPARHVLAVDGRKCERWVLPDWDCDHANPPRGGWLVIDRDGLEFYDLET
>NZ_CP053986.1|WP_042794482.1|2869434_2869944_+|peptidylprolyl-isomerase
MSTNPRVKLQTNQGDMVITLDAAKAPKTVENFLTYVKEGFYNGTVFHRVIDGFMIQGGGFEPGMKQKQTHAPIENEANNGLKNDKYTLAMARTSDPHSATAQFFINVSNNDFLNFTAPTPNGWGYAVFGTVTEGTDVVDKIKGVKTGNKGFHQNVPNEDVIIEKAEVLE
>NZ_CP053986.1|WP_062684054.1|2868616_2869300_+|hypothetical-protein
MTIKPRFRVALLALALASAPVGASFAQSMAGGGGENPNASRTTLDPIPPEGGWDSLAKLLEAAKPGVDTRLTPSASQITTHIERLLNRGDDEEALALIEKRLAETKDQRGTDVQLMFQHARALAALHRTNEAIDVYNEMTTRFPELPEPWNNLAALYAGRGELERAQDALQMALRADPNYAAARANLGDLQLLQALRTYKKAASDGVPGMQDKAREVETMLKDKQGK
>NZ_CP053986.1|WP_062684055.1|2866884_2868339_-|cysteine--tRNA-ligase
MLQIYNTLSRTKEPFKPTQAGQVRMYVCGMTVYDFCHLGHARMLVSFDVVQRWLRASGLAVDYVRNITDIDDKIIRRAVETGRRIGEVTEFYIDAMHADERALGVQTPDREPRATQYVGEMLDIIGKLEQNGLAYQADDGDVNYAVRGFPGYGKLSGKTLDDLRAGERVAVGSAKRDPLDFVLWKSAKAEEPADTKWESPYGLGRPGWHIECSAMSKSLLGLPLDIHGGGPDLKFPHHENEIAQTEGAFGGALANIWMHCGPLMVDSDKMSKSLGNFRTIRQTVALDDPSADQSTYRVNPREAEMVRFFIVRNHYRSPQNYTPDNLVDAQNALDRLYQALQNVPADDQGIDWNEPQAQAFKAAMDDDFNSSGAVAALFELASEANRGKSARSAGQMKALAALLGLLQQDPAAYFQSPTRYSAAAMEQGERRALDADAIQSLIDARAAAKAARNFAEADRIRAELRDAGIELDDKPGGLTQWRRA
>NZ_CP053986.1|WP_062684103.1|2866222_2866864_-|DNA-3-methyladenine-glycosylase-2-family-protein
MSTDLEIPKPEYWEAAVAHLMRRDRILKKIIPQHPEVWLTSRGTPFVTLARAIIGQQISPKAADAVWTKFIDAVGKRPTPVAVLRVGLDGLRAAGLSQRKAEYVVDLAVHFGERRVHPEKWAAMDDEAVISELVAIRGIGRWTAEMFLIFNLQRPDVLPLDDPGLLKAISLHYFSGEPVSRFEAREVSLAWQPWRTVATWYLWRSLEPTPVQY
>NZ_CP053986.1|WP_062684056.1|2865220_2866186_-|acetyl-CoA-carboxylase-carboxyltransferase-subunit-alpha
MRNTFLEFEQPLAELENKIEQLRYVQADSAVDISDEIGRLQQKSQTLAKEIYAKLTPWQTALVARHPQRPYTLDYVREMFTDFHELHGDRMYADDQSIVGGLARFNGTPCMVIGHQKGRDTKERAARNFGMPRPEGYRKALRLMRLAEKFGIPVFTFVDTPGAYPGIGAEERGQSEAIGHNLYAMAELKVPVICTIIGEGGSGGALAIAVGNAVLMLQYATYAVISPEGCASILWRSAEKAPEAAEALAIIAPRLKDLGLVDRVVNEPVGGAHRDPRVMARLLRRALGDALRQLQGMTPEQLVEQRVQRLLSYGAFQEVRA
>NZ_CP053986.1|WP_062684057.1|2864094_2865159_-|tRNA-lysidine(34)-synthetase-TilS
MTAPDAPGTPEPTGADPSPALPLSPELASALRRALLALPERPARIAVAVSGGADSAMLAVHAAAVARELGIGIALFHVHHGLQASADEWGRQVRVLAERLALPLSEARVDVALGAGKGIEAAARDARYAALARLAGEHGIRHVLLAHHRNDQAETVLLRLLRGTGLVGMAAMKPVSARDGVVYLRPWLELGREAILRAADDVEAACGWRPVQDPTNADPRYTRAALRELLAPALDARWPGWRAIVARHARHMAQAAEILDEVAREDFAALDPSPDGASFSLKAWRGLSEARQAHVLRHWLERNGARMPTDARMQDLLRQLRGLHSLGHDRQLRVEQAGHVIRCHRGRVWVEPRA
>NZ_CP053986.1|WP_062684058.1|2862652_2863918_-|aspartate-kinase
MSLIVHKYGGTSMGSVERIKNVARRVAKWHAAGHQVVVVPSAMAGETNRLLGLAREISPQPDNRELDMIAATGEQASSGLLAIALQAEGVPARSYAGWQVPVRTDSSFTKARISSIDDARIRGDLDAGRVVIVTGFQGVDPEGHITTLGRGGSDTSAVAVAAAIKADECLIYTDVDGVYTTDPRVVPEARRMAVVSFEEMLEMASLGSKVLQIRSVEFAGKYRVPVRVLSSLTDPLIPLDEEMVSGTLITFEEDEKMEAAVVSGIAFSRDEAKITLLAVPDKPGIAFSILGPVAAANIDVDMIVQNQSVAGTTDFSFTVNRNEFARAVDLLKREVIPAVGARELSTDEKVAKVSIVGIGMRSHVGVASLMFQTLSQEGINIQMISTSEIKTSVIIDDKYMELGVRALHKAFGLDQAPAEKA
>NZ_CP053986.1|WP_062681289.1|2873967_2874417_-|azurin
MLAKATLAIVLSAASLPVLAAQCEATIESNDAMQYNLKEMVVDKSCKQFTVHLKHVGKMAKVAMGHNWVLTKEADKQGVATDGMNAGLAQDYVKAGDTRVIAHTKVIGGGESDSVTFDVSKLTPGEAYAYFCSFPGHWAMMKGTLKLSN
>NZ_CP053986.1|WP_082775736.1|2874700_2876959_+|regulatory-protein-NosR
MQGSTAAGLRFTRFIQAALLILLLFGTAIGIAQAQRLPDFLASTPIGELFPGADRVDAPAGKPMVAKAYAGGRQVGVVYLTSDVVNTRGYSSKPIDVLVALANDGRIMGAKLVEHHEPIVLIGIPQAKVDHFISGYVGLNFVDSPPRHGAPPPVDIISGATVTLMVIGDSITRSAIAVARAHGIDKTAAPAQQAAPVAARVVDDKQDTPQSWQALLDAGAVRNLRLTPEDVDRAFRESGRADAAAGGDGKSDDDTFIDLYAALVSVPAIGRSLLGDTEWQRLKERLKPGQQAVLVAGNGSYSFKGSGYVRGGIFDRIEVIQDEGSFRFRDRNHQRLADVVAEGAPAFREVALFVVPDDAILDPVAPWRLQLMVQRVLSVKDKAFVTFDLGYDLPSAYTRPADGAQPPAATPATAAANSAPAAAQAAAEEPAPALWKQIWRGKSGQVAVLTVALLVLVGIFFFQDQLTSRPLLHDRLRLAFLAFALFWIGWYGQAQLSIVNVLTFFSALRSDFRWEYFLMDPLVFILWCATAISMVFWNRGAFCGWLCPFGALQELTNRVAKRLGVRQVKISHGVNQRLSTLKYVIFLLLFGFSLYDLALAEQLSEIEPFKTAIILRFVRYWPFVVFAVALLAAGLFVERFFCRYLCPLGAALAIPARLRIFNWLRRYRDCGNPCQRCNLECPVQAIDPTGEINPNECIQCLHCQMLYHHDQKCPHLIQKKAKRERRRPAAEEPVEQPIVIHRAPNPNPQSEA
>NZ_CP053986.1|WP_062681290.1|2877075_2878992_+|TAT-dependent-nitrous-oxide-reductase
MSDKNPEKAGLTRRSFLGTAAITGAAGLVAGAQIPTAHGKDAKAGANGVLGHVGPGELDEYYAFNSSGQSGEVRVLGLPSMRELVRIPVFNHCSATGWGRTNESRKILTEGLTPETREYLKDKGGVFPNGDAHHPHLSFTDRTYDGRYLFINDKANNRVARIRLDVMKTDKITELPNVSGVHGLRPQRYPRTGYVFANGEHISPLPNDGKVLDDPKKNFFAVYTALDGDTMKVAWQVLVDGNLDNGDADYQGKYSFSTCYNSEKGVTVEEMSANEQDWVVVFNIKRIEEAVKSGDYKMMGGVPVIDGRHGSKYTRYIPVPNSPHGCNAAPDGIHVVLNGKLSPTVTVLDVRTLDDLFDDKIKPRDCVVAEPQLGLGPLHTAFDGRGNAYTTLFIDSQMVKWNIDKAKRAYKGEKVDPIIQKLDVHYQPGHNHTTMGETREADGKWLVSLNKFSKDRFLNVGPLKPENDQLIDISGDEMKLVHDGPSFAEPHDMCLVHRSKVHPLSVWKRDDPMWEEARQMAKKDGVSLDDAAKVVRDGNKVRVYMMAVAPMFSLKKFEVNQGDEVTVVVTNMEVIEDLTHGFTLEGHGIAMEIGPQATSSVTFKADRPGVYWYYCQWFCHALHMEMSGQMIVHPKKTA
>NZ_CP053986.1|WP_062681291.1|2878997_2880296_+|nitrous-oxide-reductase-family-maturation-protein-NosD
MRLIAMLTSGGRGAARAALAAFALALSGAAVAAVHAVAPGADLAQAIAAAEAGDVLKLAPGTYAGGIVIDKPLTLEGPEDRSAVIAGTRQGRTVWVKAADVSLRSLTVTRSGLSLSEMDAGIFLDREAHRARVEGNDILDNLVGVHVWGPSDALVRGNRIVGNKELRVAERGNGVTLWNTPGTRILDNDISAGRDGIFVNTSKQNTFNDNRFHDLRYAVHYMYTNDSEISGNVATGTDVAYAIMYSHRLIVRGNVALDSREQGLMLNYANHSRITDNSVDRAGKCVFIYNANRNVFQDNRFANCEIGVHFTAGSEGNQIAGNAFINNRNQVKYVGTRTLDWSVDGRGNYWSDNTAFDLDGDGIADTAYRPNDVVDQLLWRAPAARILLNSPSITIVRWAQSQFPAILPGGVIDSAPLMQPPQPAADRPKESP
>NZ_CP053986.1|WP_062681292.1|2880292_2881192_+|ABC-transporter-ATP-binding-protein
MNTDLVTLSGVSKHYGAQHAVDGLELQLREGECVALAGHNGAGKSTLIKLILGLIRPTRGRVALFGHDAHSPAAARMRNRIGYLPETVALHPSMTGEETLAFYARLKRQPLSGNPALLEKVGIAGAARRRVGGYSKGMRQRLALAQALLGEPRVLLFDEPTTGLDPASRLMFYDIVHELRASGATILLSTHALSELAGHADRIVVMKAGRKIADGAMSALRRSTGLPIRIRLTLASADTPPPGAWRRIEAGRYELACQEHDKIAAIRSIGAISSDIHDLDIQVPGLDDIYAHLLEREDV
>NZ_CP053986.1|WP_062681293.1|2881188_2882019_+|ABC-transporter-permease
MNAVATIIGKEIRDGLRNRWVLATALLLAALALALGLLGSSPTGTVKAEPLTVTVVSLSSLSIFLVPLIAMLLAYDAVVGEVDRGTMALLLSYPVSRWQVLVGKFIGHLAILALATGAGYGSAGLALQWAYGGLDASAWQPFALLIGASVLLGASFLAMGYLISTLVRERATAAGIALGVWLFFVVIYDMALLGVLAADQGRHVSPGMLNALLLFNPSDVYRLLNLTGFENISLYAGMAGLSDQASLPLAALIAALLLWIAVPFLLATAAFRRKQL
>NZ_CP053986.1|WP_062681294.1|2882015_2882519_+|nitrous-oxide-reductase-accessory-protein-NosL
MRRLRLALALAALLTAAACGNGAGPDAPPPAPQPVTLESVGHYCGMALNEHNGPKGQLFLKGRPAPVWFSSIKQVFAYTLLPEEPKTISAIYVNDMATAGADGAPDPAAWIDARQAFYVIEGRFIGGMGAEDAMPFSQRASAETFAQAHGGRVVTFAEVPEAYVFAQ
>NZ_CP053986.1|WP_062681295.1|2882562_2883561_+|FAD:protein-FMN-transferase
MNPTRRRFIGIAAAASALALAPFPARRAAASIAPTVWQGVALGADAELRLYHPDPQAAQRLIAQSLQELRRLEAVFSLYRDDSALSRLNRQGYLDNPPADLLRLLSVSQRYGRLTGGAFDPTVQPLWKLYAGHFAQPGASRDGPPALAVTQALARVSYEDVALESDRITLQRPGMGITLNGIAQGYITDRVTELLKEAGLERALVDMGEIQGMDTRDAPADWQVGLADPQNPAALLATARLRNQALATSGGYGTAIDAEGRFTHLFDPRTGRARPLYRSVSVMAPNATMADALSTAFSYMPLDAADVIVREHGLRAWFALPDGGLAVQGAES
>NZ_CP053986.1|WP_062681296.1|2883726_2884512_-|inositol-monophosphatase
MHPMLNIAIKAARRAGTIINRASMDLERLSVARKGPRDYVTEVDRAAEESIVETLRAAYPDHAVLGEEFGLQGPDQAEFQWIIDPLDGTTNFIHGLPNYAVSIALTQRGQVTQAVIYDPSRNELFTASRGSGTFLNDRRVRVSGRTRYHEALLGAHWPNAGDLEQGSARFRQMAEGSTGVRRLGATVLDLAYVACGRLDGFCGVGLKPWDLAAGSLMVLEAGGLVSDFDGEQEWMDTGNVLAASPKIFTQMLSALNPPSAA
>NZ_CP053986.1|WP_075873352.1|2884643_2885411_+|RNA-methyltransferase
MTQAFSRVRFIMVNPSHPGNVGSAARAIKTMGFSELVLVDPKFPDVTSQPEAVALASGAADVLEGAQVYGTLEEALEPVTLAFALTARVRDLGPPPCDIRQAAELARDHLADTAEGIAAVVLGTERAGLTNAQIALCHRICHIPANPEYSSLNVAQALQLAAWELRYALLVAQGAALLPASTAQEPAPGAAPASSAAVQAFLAHWEEALIGVQFLDPAHPKKLMPRMRHLYSRLSLTRDEVDMMRGVCTAMLKKK

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Crispr_ID: NZ_CP053986_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053986_4

5627126-5627207

Orphan

Consensus_repeat	Method
CCTACGAAAACACTAGACGCCCACGAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP053986_4

>merge|NZ_CP053986|4|5627126-5627207|CRISPRCasFinder
CCTACGAAAACACTAGACGCCCACGAAAACACAGACGCCCACGAAAACACAGACGCCTACGAAAACACTAGACGCCTACGAA

>NZ_CP053986|4|4|5627126-5627207|CRISPRCasFinder
CCTACGAAAACACTAGACGCCCACGAA	AACACAGACGCCCACGAAAACACAGACG
CCTACGAAAACACTAGACGCCTACGAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053986.1\|WP_062681111.1\|5625471_5626197_+\|amino-acid-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224051
NZ_CP053986.1\|WP_062685279.1\|5617713_5619003_+\|dihydroorotase	unknown	unknown	gnl\|CDD\|181059
NZ_CP053986.1\|WP_062681117.1\|5632989_5634768_-\|iron-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224099
NZ_CP053986.1\|WP_062681110.1\|5624758_5625475_+\|amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223836
NZ_CP053986.1\|WP_062681108.1\|5623198_5624026_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270407
NZ_CP053986.1\|WP_062681120.1\|5638567_5639239_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP053986.1\|WP_062681113.1\|5628073_5629252_-\|LPS-export-ABC-transporter-permease-LptG	unknown	unknown	gnl\|CDD\|275201
NZ_CP053986.1\|WP_062681107.1\|5621916_5623134_+\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|180403
NZ_CP053986.1\|WP_062681109.1\|5624054_5624756_+\|amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223836
NZ_CP053986.1\|WP_062681114.1\|5629342_5630065_-\|monofunctional-biosynthetic-peptidoglycan-transglycosylase	unknown	unknown	gnl\|CDD\|234603
NZ_CP053986.1\|WP_062681118.1\|5634885_5635983_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|224753
NZ_CP053986.1\|WP_062685280.1\|5616796_5617717_+\|aspartate-carbamoyltransferase	unknown	unknown	gnl\|CDD\|234849
NZ_CP053986.1\|WP_062681115.1\|5630070_5630934_-\|shikimate-dehydrogenase	unknown	unknown	gnl\|CDD\|234703
NZ_CP053986.1\|WP_062681119.1\|5636088_5638581_-\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|223715
NZ_CP053986.1\|WP_062681106.1\|5621245_5621920_+\|RraA-family-protein	unknown	unknown	gnl\|CDD\|180465
NZ_CP053986.1\|WP_062681116.1\|5631908_5632997_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226361
NZ_CP053986.1\|WP_062685278.1\|5618999_5619740_+\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	unknown	unknown	gnl\|CDD\|153251
NZ_CP053986.1\|WP_082775734.1\|5630930_5631872_-\|TonB-family-protein	unknown	unknown	gnl\|CDD\|367555
NZ_CP053986.1\|WP_062681105.1\|5620179_5621073_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_CP053986.1\|WP_062681112.1\|5627243_5628077_-\|symmetrical-bis(5'-nucleosyl)-tetraphosphatase	unknown	unknown	gnl\|CDD\|234673

Protein	Function_ID	Function_description	E-value
NZ_CP053986.1\|WP_062681111.1\|5625471_5626197_+\|amino-acid-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224051	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].	1.10804e-155
NZ_CP053986.1\|WP_062685279.1\|5617713_5619003_+\|dihydroorotase	gnl\|CDD\|181059	PRK07627, PRK07627, dihydroorotase; Provisional.	0
NZ_CP053986.1\|WP_062681117.1\|5632989_5634768_-\|iron-ABC-transporter-permease	gnl\|CDD\|224099	COG1178, ThiP, ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism].	6.24339e-102
NZ_CP053986.1\|WP_062681110.1\|5624758_5625475_+\|amino-acid-ABC-transporter-permease	gnl\|CDD\|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	7.92315e-75
NZ_CP053986.1\|WP_062681108.1\|5623198_5624026_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|270407	cd13689, PBP2_BsGlnH, Substrate binding domain of ABC glutamine transporter from Bacillus subtilis; the type 2 periplasmic-bindig protein fold. This group includes periplasmic glutamine-binding domain GlnP from Bacillus subtilis and its related proteins. The GlnP domain belongs to the type 2 periplasmic binding protein fold superfamily (PBP2), whose many members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space as a primary receptor. The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two receptor cytoplasmically-located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.57466e-100
NZ_CP053986.1\|WP_062681120.1\|5638567_5639239_-\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	7.55166e-71
NZ_CP053986.1\|WP_062681113.1\|5628073_5629252_-\|LPS-export-ABC-transporter-permease-LptG	gnl\|CDD\|275201	TIGR04408, LptG_lptG, LPS export ABC transporter permease LptG. Members of this family are LptG, one of homologous, two tandem-encoded permease genes of an export ATP transporter for lipopolysaccharide (LPS) assembly in most Gram-negative bacteria. The other permease subunit is LptF (TIGR04407). [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides, Transport and binding proteins, Other].	2.93242e-87
NZ_CP053986.1\|WP_062681107.1\|5621916_5623134_+\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|180403	PRK06107, PRK06107, aspartate transaminase.	0
NZ_CP053986.1\|WP_062681109.1\|5624054_5624756_+\|amino-acid-ABC-transporter-permease	gnl\|CDD\|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	8.56367e-70
NZ_CP053986.1\|WP_062681114.1\|5629342_5630065_-\|monofunctional-biosynthetic-peptidoglycan-transglycosylase	gnl\|CDD\|234603	PRK00056, mtgA, monofunctional biosynthetic peptidoglycan transglycosylase; Provisional.	6.85914e-120
NZ_CP053986.1\|WP_062681118.1\|5634885_5635983_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|224753	COG1840, AfuA, ABC-type Fe3+ transport system, periplasmic component [Inorganic ion transport and metabolism].	6.09276e-48
NZ_CP053986.1\|WP_062685280.1\|5616796_5617717_+\|aspartate-carbamoyltransferase	gnl\|CDD\|234849	PRK00856, pyrB, aspartate carbamoyltransferase catalytic subunit.	1.98885e-45
NZ_CP053986.1\|WP_062681115.1\|5630070_5630934_-\|shikimate-dehydrogenase	gnl\|CDD\|234703	PRK00258, aroE, shikimate 5-dehydrogenase; Reviewed.	7.47964e-119
NZ_CP053986.1\|WP_062681119.1\|5636088_5638581_-\|extracellular-solute-binding-protein	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	1.63134e-45
NZ_CP053986.1\|WP_062681106.1\|5621245_5621920_+\|RraA-family-protein	gnl\|CDD\|180465	PRK06201, PRK06201, hypothetical protein; Validated.	1.20301e-88
NZ_CP053986.1\|WP_062681116.1\|5631908_5632997_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|226361	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism].	3.34924e-137
NZ_CP053986.1\|WP_062685278.1\|5618999_5619740_+\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	gnl\|CDD\|153251	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins.	1.9381e-41
NZ_CP053986.1\|WP_082775734.1\|5630930_5631872_-\|TonB-family-protein	gnl\|CDD\|367555	pfam03544, TonB_C, Gram-negative bacterial TonB protein C-terminal. The TonB_C domain is the well-characterized C-terminal region of the TonB receptor molecule. This protein is bound to an inner membrane-bound protein ExbB via a globular domain and has a flexible middle region that is likely to help in positioning the C-terminal domain into the iron-transporter barrel in the outer membrane. TonB_C interacts with the N-terminal TonB box of the outer membrane transporter that binds the Fe3+-siderophore complex. The barrel of the transporter, consisting of 22 beta-sheets and an inside plug, binds the iron complex in the barrel entrance.	4.20699e-10
NZ_CP053986.1\|WP_062681105.1\|5620179_5621073_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	1.15157e-36
NZ_CP053986.1\|WP_062681112.1\|5627243_5628077_-\|symmetrical-bis(5'-nucleosyl)-tetraphosphatase	gnl\|CDD\|234673	PRK00166, apaH, symmetrical bis(5'-nucleosyl)-tetraphosphatase.	4.80457e-155

>NZ_CP053986.1|WP_062681111.1|5625471_5626197_+|amino-acid-ABC-transporter-ATP-binding-protein
MIRFSEVQKWYGQYQALSDVTARVGQGEVVVVCGPSGSGKSTLIRTVNRLEPIQKGVIEVDGQDIYGPKVHLDTLRSHIGFVFQQFNLFPHLSVLENLMLAPLQLKRARRPEARERALQLLERVGLTHKAEAYPAQLSGGQQQRVAIARALAMNPPVMLFDEPTSALDPEMVGEVLQVMKGLAKDGMTMVCVTHEMGFAREVADRVWFMDAGRIVETGTPEEFFTRPGTARAQKFLAEIRH
>NZ_CP053986.1|WP_062681110.1|5624758_5625475_+|amino-acid-ABC-transporter-permease
MWGILKDNWLLLLVGQYPHGPVGGLAATLGLAAVSLALALPCGVLLALGRISPYRVFYWPASAVVYLVRGLPLLMFIFWAYFFVPLIIGRPVAGTTTMVVALVCYESAYLAEIIRAGIQALPPGQQEASRALGLSYMQTMRRVILPQALYNMLPSMLSQFVSTVKETSLAYVISVQELTYAANQINSVLLTKPFEVFGLLALTYFILNFGLSSLVHLTERRIGRRRAGLMPAPRAVPT
>NZ_CP053986.1|WP_062681109.1|5624054_5624756_+|amino-acid-ABC-transporter-permease
MHYVFDFGAIFQGEYPDWLLRGFITTLALAGFAWILAFLVGSLLAVIRLTGSPVANGLIATYVAFHRNVPMLVHILFWYFGVPALLPQAATDWLNSHGSEFILSCIAIGLVMSAYVCEDLRSAVRGIPAGQVEAARALGLGFLATMRKVVLPQAFRIAIPPLLNQTLLLLKNTSLAMAIGVTELTAAGREIENYTFRTFEAYAVVTVIYLVLSFLIMGGGALLQRRYRPLGAR
>NZ_CP053986.1|WP_062681108.1|5623198_5624026_+|ABC-transporter-substrate-binding-protein
MKTTIASFVAAAGLAAALAPGAHADTLADIKARGKFICGTMGTAEPFSFQDPKTRGIVGYEVDMCQAVADSLGVPLELKLIAVEARIPELIAGRVDVVAANLGWSPERAQQIDYSHQHFVSLQKVLARDSEKDLKAPADLAGKRVSAVRGSSSEQGARKNIPNVEPVTFKDPSGAFLALQQGKVSGFVASELMLVKLKQQAAGSAVPVKILEPALFVEPWGMGVRKGDSAMLEQVNKVLDGMEASGQAAKTFDKWFGAGTQFDMKRDFRIEAIKG
>NZ_CP053986.1|WP_062681107.1|5621916_5623134_+|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme
MNAAASEFLADRARAIKPSPSMAAKSRVDQLRAQGRDIIDFTVGEPDLPTPAHIVQAGIDALNSGDIRYTASAGAKPLLEAVRAKFQRENGLEYALDELIVGVGAKQLIFTALAATVQAGDEVIIPAPYWVSYPDMVLVNDGTPVVVACPESDGFKLTPEALERAITPRTKWLLLNTPGNPTGAMYGADELRALGDVLARHPQVWLMTDEIYEHLAYGDERHLSPAAAVPALAGRCLTINGVSKAYAMTGWRLGYAGGPKALIKAMSTLISQSTSCVSAISQSAARVALTADQGCVREAAEVFHARRDRIEALLDAVPGIRCPRPQGAFYVYPSVEGLLGKRTADGRELRTDLDVVMFLLDDAGVAVLDGAAYGLSPYLRLSFATSMENIEEGCRRIREACAGLI
>NZ_CP053986.1|WP_062681106.1|5621245_5621920_+|RraA-family-protein
MASIHTGARILPAPPVASAAVLQALAGIVTPHLSDNLARREGISGLRRYHGAGKLVGTALTVKTRPGDNLLIYKAMMLVQPGHVLVVDAGGDLSNAVLGEIMKRYLQVHGCAGVVVDGAIRDVAAFEADSFPCYARGHIHRGPYKDGPGEVNVPVSIGGQVINPGDIVVGDEDGLVSFAPAEADALVAAAQAHAAKEERIMAEIAGGAKAQSWMQAAFAAKGLE
>NZ_CP053986.1|WP_062681105.1|5620179_5621073_-|LysR-family-transcriptional-regulator
MLTFKQIEALYWTVRLGTFAASAQKLHTTQSAITKRIQELEADFDIALFDRSGHRAELTARGHEVYALAEEMLGHRDRLLVRLKGQHMLTGTFRFGITEITAMTWLPALIRLLRAHYPRITLEPHIDLGGDLLKRLQAGQLDMAFLHGEFAEPNVQVVPLQRLEFAWMGSPDMIDSSRVYTPADIAALPLLRQSRESGLNMIYDGWLRPHTPVSNIFTINSLIAMAGLTAAGFGVSCLPRDYFADMVSAKQLVIARTSLAPPQSVYCAMFRRDADVGFCESVAGLAESCCEFSGGGR
>NZ_CP053986.1|WP_062685278.1|5618999_5619740_+|1-acyl-sn-glycerol-3-phosphate-acyltransferase
MKLLRFVLRLFLVVPWILFGLLCVGLVYPMLGNRARAWLNRRWSRCLMAFCGLRVILKGEPRLTGPVLMVANHVSWIDIFVLNSARAMSFVAKSEIRSWPIIGWLVAGAGTLFIERGQRHAVHAMGEAMQARFKQGDAVGLFPEGTTSVGFELLPFHASLFEPARSAAVEIQPVALRFLQHGQRSGYAAFVGEESLVANLWRVLGVTGLAVEVVFLPPLPARHPDGTLPTRLELSHQARDEILSVL
>NZ_CP053986.1|WP_062685279.1|5617713_5619003_+|dihydroorotase
MRLHIANGRLIDPANGVDGEHDLYIADGHVAAVGQAPDGFHADRRLDARGLAVLPGLVDLSARVTQPGAAAFAPAELRAALAGGVTTLVLPPDAGAPLDEPGKVDALMRQAEPGHCRVRPLGAMTVGLAGETLAEMDLLAAAGCLAFAQGDLGIADTRALWGAMRYASGQGHALWLRPQDPWLARGAVAASGAYAERLGLQGLPPQAETLALQTIFELQRATGARVHLARLSTAAGLDLLRAAKREGLPVTADVSANSLHLTDVDIGFFDTNFHLQPPLRGQRDRAAIQAALADGVIDALCSDHTPVESQAKAAPFPLSQPGATGLELLLSLALKWARDSRRPVSEALARVTSGPAAVLRAITPLAPPAGQLGVGAPADLCLADLDAEWLIMPGALQSRSGHTPFASMMLPGRVRATVVGGSLAWETTV
>NZ_CP053986.1|WP_062685280.1|5616796_5617717_+|aspartate-carbamoyltransferase
MLNPQLDRRGELIHLLTTEGLPRRHVERLLEAARGCAAGATPQGGPASGLPVFLCLPEDAARDRDAYAAAASGLSLRPVELDARAGDALAGTVAGLEPGLLVLRHAASGAAHCAAAHAAPGLRVLNAGDGSHADPVPALALVQAMLESGLDLTNIAATLVGDVLHSGVARSVIHAMTTLGVPEVRAAAPRSLLPVGLAQLGARACASLREGLQDADVVIVLPLGVERLSGALLPSAREYAHAWGLAPGVLAGARPEALLLPAGELTPGVEVDGDVAASLAPMQARLDGLEQSLRQAALAVLAGDAP
>NZ_CP053986.1|WP_062681112.1|5627243_5628077_-|symmetrical-bis(5'-nucleosyl)-tetraphosphatase
MNGSIWMIGDVQGCCSPLDRLLSHPDLVGDPKSRFWFAGDLVNRGPESLETLRRIIDLGDRATSVLGNHDLHLLATAAGVRKPSKSDTLDDVLRAPDAAELINWLRFRPLAHFEQGHLLVHAGTLAKWDVAKTLALAGEVQDALRGPNWQKALQKMYGNEPATWKEDHKGGKRMRVIINALTRIRLCTPNGHMEFATKVTPGAWPPGLVPWFDVPNRATRNVTTVFGHWSTLGLLQRPDVICLDTGCVWGGSLTALRLQDRKLVQVKCSQFQDPLSE
>NZ_CP053986.1|WP_062681113.1|5628073_5629252_-|LPS-export-ABC-transporter-permease-LptG
MRTARRYLAREIYRSCAVVLMALLGLFTFFALVDDLDNVGDKFSMMALLYMQALAIPTRLYDLLPIGLLIGAILALAGLAQRNELVILRVSGVSGMKLLRMLWIVTIPLMIGAGLLSEYVTPWAEIKSGEANLMFRGKAGGDRLKSGYWFKEPTANGGTRIINIGELKGDGQVNAVTLYEFKKDLTLSVLSTAPTGLFTHGDLVLKDVSETRLDENAAEALADARPPKNPPATVVKVPERTVDTTLSAERLLARVLTPERMSIVTLLDYVDYLRNNQLQYGRQVVALWRKLAYPFTLLVMITIAAPIGLMQTRRGGVGAKVFLGILLGVAFFMLNQLALNVGMLGKWPPWLTALGPNLGAVILALGAMSYMEYRHTITRIVQQRWPWSKSPA
>NZ_CP053986.1|WP_062681114.1|5629342_5630065_-|monofunctional-biosynthetic-peptidoglycan-transglycosylase
MATRKGRSWFRIVTGVLMALVCAVLLYQFWLFSQVVWYNYRDPGSSAVMREELSRLREDNPALELKYEWVPYDKINRTLKRAVVASEDSKFTEHDGVEWDAIRKAWEYNQKQQEAGRSKMRGGSTITQQLAKNLFLSSSRSYLRKGQELVLTYMIEHVMSKERILELYLNVAEWGVGVFGAEAAARHYFNTSAASLGASQSARLAAMLPNPRFYDSHRNSRYLNSRVGVLTRRMQMVDIP
>NZ_CP053986.1|WP_062681115.1|5630070_5630934_-|shikimate-dehydrogenase
MTEASPLARYAVIGNPIAHSRSPQIHAMFSRQTGKPLRYDRLLAPVDGFAEAVAAFVAEGGVGLNVTVPFKLDAYALAAGRLSARARLAGAVNTLSWRDGAWHGCNTDGVGLVSDLLRLGRRLSGASVLLVGAGGAARGVLQPLAEAGCARIHIVNRTAARALELAEAWRQSGVSPQTQVTAGGLADAAQPGGWDLVVNATASGLRDAAPDLPPGLYAPGAAAYDMMYGAQPTAFMKQAEADGAALTADGLGMLVGQAAESFFIWHGLRPDPAPVLAALRADLAAGH
>NZ_CP053986.1|WP_082775734.1|5630930_5631872_-|TonB-family-protein
MPARAADVDSLYNAFVQRPDSSSTLSRYLWWLGAPAQHYLRIGIAISLLVHAGALAWRFGTSAPSRPPVTSLEIVLLNARSETPPDTPRAQAQNQMSGGGNAEHGLSTTPLPRTGESAETIVLEAMRRRQVQLEAEQTRLMTQLRSADKAGAERQAVNPWPDGADLGRDAEDQASVIQSAQVAALAARVQQYSAEPRKQFVAPSAEASRYAAYLDAWRTRIETVGTQHYPDEARGRIYGSLRITVSVRADGSIANVEIDQPSQHAVLNQAARRIVQLAAPFPPFPPDIARDTDVLVITRTWHFVNDTLETQAP
>NZ_CP053986.1|WP_062681116.1|5631908_5632997_-|ABC-transporter-ATP-binding-protein
MIELSVEDLHLDYGDNPVLKGVSMQLRQGEVVSLLGPSGSGKTTLLRAVAGLEGPKRGRITIGERVVYDGAARQEIPAEERNLGLVFQSYALWPHKTVFENVAYPLKLRKTPGAEVRERVQAVLDQLGLGKLGQRHPHALSGGQQQRVAIGRALVYSPPVILLDEPLSNLDAKLREEARAFLRELIIRLGLSALMVTHDQSEAMAISDRILLLNNGKIEQQGTPQEMYGAPSTLFTAEFMGSNNRLDGKVTEVRDGQARIEGRGWSLWGKASAGVAAGQDGTAVIRVEQVRLADDPDGNHLDMPLLTSMYLGDRWEYLFRTPDADPAHTLALRAYGPEGREPGPCRLALPAGKVWVFPRAGA
>NZ_CP053986.1|WP_062681117.1|5632989_5634768_-|iron-ABC-transporter-permease
MQSLRRKWQSLPRGVVVLITALAIYVPLSFIIVQSFLSAPFFSPSKTFSLDAFRFIFADPDFYKALKSGFILAFGLAIIAIPLGGMLAFLMIRTDLPGRRWIEPLILVPVFVSPMVLGFGYVVAAGPVGFFSTWAQNILGFVPWNVYSLTSIVIIAGLTHVPHAYLYISSALRSMGSDVEEAARVAGATPLRVMVSVSLPMVRPAMLYATVLLFFLGLEVFGLVLVLGDPEGNLVLATYLYKLTNKLGIPSYHLMAAVAVVLICMTIPLVMLQRRLMRSANRFVTVKGKASRARPLPLGKWRWVAGAVVALWLLVTIVVPLMGVLLRAFVSNWGMGVSLLDVLSLDAFRTVFAQPNLLRAIVNSVAIGVFGGALAVMCYMFVGLAMHRKPDNVTRFMDYSVLVPRAVPGLLAGLAFLWVFLFVPMWLDNALDVDENGWLSALPFAEWLRENFIEWLRAMRSTIFSVWLAYTVVWMAYGLRLISSTLLQVGPELEEAARSAGARRGQITRHVTVPLAKYGLIGSWLLMFLIFEREYSTGVYLLSPGTETIGSMLVSLWASGAIDIVAALSFINIVLVVIGLGIALRFGVKLHD
>NZ_CP053986.1|WP_062681118.1|5634885_5635983_-|ABC-transporter-substrate-binding-protein
MLAKSQLAAACAAAFAIATGSAFAQQVPAGYPADYQKILDGAKKEGKVVIYSTTDTKAAGPIIKGFEALYPGVKVEYNDMNSTELYNRYISEQAAGGGSGDIVWSSSMDSALKLATDYALKYKSPESGKLPAWAVWKDSAYGTTYEPAVFIYNKRLIPANEVPTTHAALAQLVSSQPDKFKNKVTTYDIEKSAVGFMLAVQDKANDPKYFETLKGIGSGGLIVQSSTGTMMERVSSGENLIGYNILGSYAETRAKTDPSLGVAYPTDYALVLSRVAFISKKAKNKNAAKLWMDYLLSQKGQGIMANQADLASVRDDIEGDNDVDGMTKKLGASLKPIPVDETLLDYLEQNKRLQFIKDWRAATGK
>NZ_CP053986.1|WP_062681119.1|5636088_5638581_-|extracellular-solute-binding-protein
MSIPESFSIRRRVFTLGVLLLACALIGLVFFLRGYAQRAAEQAFDRLLAASALTIAGSVQIEDNNVTVEPPVSSLAMLSGGERVFYEARASNGRLITGYDDLAPGLPLAQSATPVFAYLRYHDEPVRVATVGRLVSASQHAGWVTVRVAETLGSRAALADEILGRSVLPLVVVSLVALGLLWFGVQRAFAPLGAVERELRSRAPDDLAPLATPVPREVKRLAEALNAFMQRLSGIMDTLNTLVADAAHQVRTPLASLRAQAEVALDETDPQRLHARLERIHQNATHASQLINQLLMDATITHRLGKGARTLVGVAETINETRRRIGPLEAQRLRIEIAPGVRRARIAGDRVALREMLRNLVDNALRYAPEGPVDIQATPVAGFRVALTVSDRGPGVADDEKDAVQQRFVRGRAGDAQPGSGLGLAIVRSVAVAHGGSLWLQDRPGGGLTARIILPLARSAPWRAAAAGLGALCIAGLLLAAAPAPVRAADFAEIVTRYPAPQPSSRILTIAGPTDTPVVAPLIQGFQSQRPDVSVVYREMGSRELYEAAIEGRLKDVDVLMSSASDLQIRLANDGYALSYASPYAAKLPSWAIWRHEVYGFTFEPAVIVYNPKRFTEATVPRSRQDLLRLLERDPARLHGRVGTYDISASSVGYLLAEQDELVSSNFWGLANAMGQVGVRLSATSAEILDAIENDDIDIGYNILGSYALSRQAAGSPIGVVFPQDYVLVLARSVLIARTAPNPDLGRALVDWLLSPAGQQVASSHAALGSIMEDTPGRWTSEAVLARSQGIVQPVVLSPALLVGLDQRRHSRFVQNWIRLVTDTPARDYP
>NZ_CP053986.1|WP_062681120.1|5638567_5639239_-|response-regulator-transcription-factor
MRILLVEDNLDLGDAVESKLRSAGHSVQWVRDGVAALRWGLDETWDALVLDINLPGKDGFTVIRELRAAGLEAPVLVMTARSEIEDKIDMLDLGADDYLVKPFDLRELEARLRALMRRPTGQTTSVTAYGNLSLDLANRHVSLAGTPLELGRREFRLLEILVGRLGQTVAKERLMNQLFDLDDGSLNALELLISRLRKKLAGASIDIVTVRGVGYQARNHEHP

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1731482 : 1739884

uncultured_Mediterranean_phage(28.57%)

tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_062682562.1\|1731482_1732334_-	peptidoglycan DD-metalloendopeptidase family protein	A0A292GJG6	Xanthomonas_phage	4.9e-14	40.2
WP_062682561.1\|1732351_1733176_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	4.3e-31	45.8
WP_062682560.1\|1733160_1733919_-	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	4.9e-66	50.8
WP_062682559.1\|1734098_1734737_+	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA
WP_062682558.1\|1734927_1735959_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	2.1e-91	51.4
WP_062682557.1\|1736081_1737374_+	NCS2 family permease	A0A0R6PHV4	Moraxella_phage	9.3e-65	35.6
WP_062682556.1\|1737601_1738606_+	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA
WP_062682555.1\|1738748_1739123_+	thioredoxin family protein	V9SJ74	Achromobacter_phage	5.5e-10	28.9
WP_062682610.1\|1739299_1739884_-	YigZ family protein	A0A1X9I5T8	Streptococcus_phage	3.3e-22	37.0

DBSCAN-SWA_2

2982303 : 3013364

Pseudomonas_phage(21.05%)

tail,holin,protease,portal,head,capsid,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_062681466.1\|2982303_2982807_-	DUF2514 family protein	Q3HQV1	Burkholderia_phage	2.2e-06	37.8
WP_062681380.1\|2982833_2983367_-	hypothetical protein	A0A0H5AXX8	Pseudomonas_phage	7.5e-29	47.7
WP_062681381.1\|2983363_2983633_-\|holin	phage holin family protein	NA	NA	NA	NA
WP_062681382.1\|2983643_2983997_-	hypothetical protein	NA	NA	NA	NA
WP_062681383.1\|2984075_2984594_-	hypothetical protein	NA	NA	NA	NA
WP_062681384.1\|2984593_2985265_-	hypothetical protein	NA	NA	NA	NA
WP_062681385.1\|2985266_2989223_-	hypothetical protein	I7HDJ4	Xanthomonas_virus	9.2e-47	29.1
WP_062681386.1\|2989210_2989597_-	hypothetical protein	NA	NA	NA	NA
WP_062681387.1\|2989598_2990075_-	DUF1833 family protein	I7GYA2	Xanthomonas_virus	9.1e-10	25.9
WP_062681388.1\|2990076_2990424_-	hypothetical protein	Q2NPH3	Xanthomonas_virus	2.1e-08	33.3
WP_062681389.1\|2990425_2993386_-\|tail	phage tail tape measure protein	A5H1M1	Xanthomonas_virus	6.0e-27	32.5
WP_062681390.1\|2993419_2993677_-	hypothetical protein	NA	NA	NA	NA
WP_062681391.1\|2993748_2994081_-	hypothetical protein	NA	NA	NA	NA
WP_075873267.1\|2994091_2994589_-	hypothetical protein	NA	NA	NA	NA
WP_062681393.1\|2994650_2995022_-	DUF3168 domain-containing protein	NA	NA	NA	NA
WP_062681394.1\|2995021_2995507_-	hypothetical protein	NA	NA	NA	NA
WP_156494253.1\|2995503_2995659_-	hypothetical protein	NA	NA	NA	NA
WP_062681467.1\|2995724_2996099_-\|head,tail	head-tail adaptor protein	H2BDB4	Pseudomonas_virus	2.6e-28	50.8
WP_062681395.1\|2996098_2996428_-\|head,tail	phage gp6-like head-tail connector protein	H2BDB3	Pseudomonas_virus	1.0e-20	57.4
WP_062681396.1\|2996430_2996655_-	hypothetical protein	NA	NA	NA	NA
WP_062681397.1\|2996702_2997881_-\|capsid	phage major capsid protein	A0A2H4PI18	Pseudomonas_phage	3.9e-102	53.8
WP_062681398.1\|2997891_2998761_-\|protease	Clp protease ClpP	A0A0U4B0F3	Pseudomonas_phage	2.6e-79	52.7
WP_062681399.1\|2998772_3000071_-\|portal	phage portal protein	G0ZT36	Aeromonas_phage	1.2e-144	61.4
WP_062681400.1\|3000067_3001837_-\|terminase	terminase large subunit	A0A0U4B0M7	Pseudomonas_phage	1.8e-265	74.7
WP_062681401.1\|3001814_3002243_-	hypothetical protein	NA	NA	NA	NA
WP_165695612.1\|3002353_3002584_-	HNH endonuclease	NA	NA	NA	NA
WP_062681402.1\|3002703_3003075_-	hypothetical protein	NA	NA	NA	NA
WP_115599002.1\|3003519_3004449_+	hypothetical protein	NA	NA	NA	NA
WP_075873257.1\|3004463_3005141_-	hypothetical protein	Q3HR05	Burkholderia_phage	3.5e-31	48.2
WP_062681404.1\|3005140_3005554_-	hypothetical protein	NA	NA	NA	NA
WP_062681405.1\|3005559_3006318_-	hypothetical protein	NA	NA	NA	NA
WP_131828717.1\|3006289_3007135_-	helix-turn-helix domain-containing protein	A4JX55	Burkholderia_virus	6.3e-46	50.9
WP_062681407.1\|3007131_3007614_-	DUF1364 family protein	Q8W6N7	Burkholderia_virus	7.8e-17	53.7
WP_062681408.1\|3007604_3007910_-	hypothetical protein	NA	NA	NA	NA
WP_062681409.1\|3007902_3008208_-	hypothetical protein	A0A1J0GUZ1	Halomonas_phage	1.3e-06	33.7
WP_062681410.1\|3008201_3008717_-	hypothetical protein	B7SYH6	Stenotrophomonas_phage	8.9e-27	38.1
WP_131828718.1\|3008800_3009091_-	hypothetical protein	NA	NA	NA	NA
WP_131828719.1\|3009285_3009534_+	hypothetical protein	NA	NA	NA	NA
WP_075873259.1\|3009547_3009745_-	hypothetical protein	NA	NA	NA	NA
WP_062681412.1\|3009831_3010515_+	helix-turn-helix domain-containing protein	A0A1I9KG86	Aeromonas_phage	3.4e-34	37.1
WP_062681413.1\|3011055_3011997_+	hypothetical protein	NA	NA	NA	NA
WP_131828720.1\|3012157_3013078_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_172600295.1\|3013160_3013364_-	cold shock domain-containing protein	A0A2H4N7Y6	Lake_Baikal_phage	1.2e-14	59.7

DBSCAN-SWA_3

6696214 : 6719921

Pseudomonas_phage(43.75%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_062683015.1\|6696214_6697438_-	DUF3596 domain-containing protein	A0A1W6JTA0	Pseudomonas_phage	4.8e-63	37.7
WP_062683014.1\|6697434_6697632_-	excisionase family protein	NA	NA	NA	NA
WP_062683013.1\|6697628_6697814_-	hypothetical protein	NA	NA	NA	NA
WP_062683012.1\|6697806_6698319_-	class I SAM-dependent methyltransferase	A0A0N7IRF6	Acinetobacter_phage	9.7e-58	66.0
WP_131828715.1\|6698311_6699289_-	hypothetical protein	A0A2H5BQE8	Pseudomonas_phage	1.2e-37	77.0
WP_062683010.1\|6699285_6699528_-	hypothetical protein	NA	NA	NA	NA
WP_062683009.1\|6700476_6701112_-	YqaJ viral recombinase family protein	A0A0U2BXF3	Paracoccus_phage	2.0e-20	38.5
WP_087881363.1\|6701111_6701792_-	ERF family protein	B5WZW4	Pseudomonas_phage	2.9e-78	92.5
WP_062683008.1\|6701892_6702993_-	hypothetical protein	Q9MC69	Pseudomonas_phage	7.7e-36	46.7
WP_087881360.1\|6702994_6703162_-	hypothetical protein	NA	NA	NA	NA
WP_062683007.1\|6703161_6703527_-	hypothetical protein	NA	NA	NA	NA
WP_088146988.1\|6703612_6703981_-	hypothetical protein	NA	NA	NA	NA
WP_062683005.1\|6703983_6704229_-	hypothetical protein	NA	NA	NA	NA
WP_082775834.1\|6704266_6705052_-	pentapeptide repeat-containing protein	A0A2P9HXG2	Yersinia_phage	5.7e-09	56.9
WP_131828714.1\|6705221_6705737_-	hypothetical protein	NA	NA	NA	NA
WP_165695611.1\|6706218_6706647_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_062683004.1\|6706645_6706939_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_062683003.1\|6706961_6707156_+	hypothetical protein	NA	NA	NA	NA
WP_062683002.1\|6707157_6707433_-	CRISPR-associated endonuclease Cas2	NA	NA	NA	NA
WP_156494257.1\|6707538_6707712_-	hypothetical protein	NA	NA	NA	NA
WP_087881359.1\|6707822_6708089_+	DNA-binding protein	E5E3P2	Burkholderia_phage	9.5e-17	51.9
WP_062683000.1\|6708090_6708546_+	recombination protein NinB	NA	NA	NA	NA
WP_082775832.1\|6708545_6709163_+	HNH endonuclease	A0A2I7RT07	Vibrio_phage	1.1e-20	40.0
WP_062683065.1\|6709155_6709560_+	DUF1364 family protein	Q3HR02	Burkholderia_phage	1.6e-23	50.9
WP_131828712.1\|6709556_6710474_+	hypothetical protein	NA	NA	NA	NA
WP_062682997.1\|6710470_6711826_+	replicative DNA helicase	H2BD70	Pseudomonas_phage	5.9e-62	36.0
WP_062682996.1\|6711828_6712044_+	hypothetical protein	NA	NA	NA	NA
WP_082775836.1\|6712412_6712787_+	hypothetical protein	R9ZZU8	Cellulophaga_phage	1.9e-31	63.5
WP_062682995.1\|6712783_6713206_+	hypothetical protein	NA	NA	NA	NA
WP_131828711.1\|6713304_6713487_+	hypothetical protein	NA	NA	NA	NA
WP_131828710.1\|6713492_6713942_+	hypothetical protein	NA	NA	NA	NA
WP_062682993.1\|6714036_6714495_+	hypothetical protein	A0A2I7RPR2	Vibrio_phage	2.0e-09	34.3
WP_062682992.1\|6714436_6715882_+	hypothetical protein	X5IGD1	Pseudomonas_phage	7.4e-79	38.0
WP_062682991.1\|6715878_6717948_+	hypothetical protein	A0A248SKZ2	Klebsiella_phage	1.4e-33	26.0
WP_075873244.1\|6718059_6718812_+	lipase chaperone	NA	NA	NA	NA
WP_062682989.1\|6718823_6719921_+	DUF4043 family protein	A0A0S3UG53	Pseudomonas_phage	2.7e-12	25.0

Anti-CRISPR protein detection

Acr_ID: NZ_CP053986.1|WP_062681378.1|2980653_2981106_+|hypothetical-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP053986.1|WP_062681378.1|2980653_2981106_+|hypothetical-protein

2980653_2981106_+

150 aa aa

hit_Aca_id	identity	query_coverage	hit_coverage
gnl\|BL_ORD_ID\|33	0.5496688741721855	1	0.993421052631579

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP053986

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CRISPR-Cas detection and classification

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Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

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