CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP053453	Gemmataceae bacterium strain PL17 plasmid pPL17-1, complete sequence	0 crisprs	RT,PD-DExK	0	0	0	0
NZ_CP053452	Gemmataceae bacterium strain PL17 chromosome, complete genome	42 crisprs	cas3,cas1,cas2,cas8u1,cas7,csb2gr5,csa3,RT,PD-DExK,DEDDh,DinG	4	21	14	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP053452_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053452_1

43400-43478

Orphan

Consensus_repeat	Method
AACAAAGCGAGCAAACGAGCAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP053452_1

>merge|NZ_CP053452|1|43400-43478|CRISPRCasFinder
AACAAAGCGAGCAAACGAGCAAAGGTGAGCGGTCTTCTGGAACGGACTGGTCAGCGAGCAAAGCGAGCAAACGAGCAAA

>NZ_CP053452|1|1|43400-43478|CRISPRCasFinder
AACAAAGCGAGCAAACGAGCAAA	GGTGAGCGGTCTTCTGGAACGGACTGGTCAGCG
AGCAAAGCGAGCAAACGAGCAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053452.1\|WP_171468931.1\|43566_46224_-\|DNA-primase	unknown	unknown	gnl\|CDD\|223435
NZ_CP053452.1\|WP_171468932.1\|46574_47507_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171468924.1\|32218_32416_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171468939.1\|66006_66228_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171468934.1\|48086_50597_+\|bifunctional-DNA-primase/polymerase	unknown	unknown	gnl\|CDD\|378140
NZ_CP053452.1\|WP_171468922.1\|28985_30008_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171468923.1\|30461_32093_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227897
NZ_CP053452.1\|WP_171468938.1\|65557_66019_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|273628
NZ_CP053452.1\|WP_171468927.1\|35407_36715_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP053452.1\|WP_171475901.1\|42283_43315_-\|site-specific-tyrosine-recombinase-XerC	unknown	unknown	gnl\|CDD\|234935
NZ_CP053452.1\|WP_171468928.1\|38056_40264_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171468935.1\|52215_52824_-\|SMI1/KNR4-family-protein	unknown	unknown	gnl\|CDD\|378155
NZ_CP053452.1\|WP_171468926.1\|34074_34908_-\|D-glycero-beta-D-manno-heptose-7-phosphate-kinase	unknown	unknown	gnl\|CDD\|274029
NZ_CP053452.1\|WP_171475902.1\|50901_51504_+\|recombinase-family-protein	unknown	unknown	gnl\|CDD\|365969
NZ_CP053452.1\|WP_171468936.1\|52825_64180_-\|VCBS-repeat-containing-protein	unknown	unknown	gnl\|CDD\|380149
NZ_CP053452.1\|WP_171468937.1\|64853_65558_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|366154
NZ_CP053452.1\|WP_171468930.1\|41461_42244_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171468929.1\|40935_41418_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171468933.1\|47606_48008_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171468925.1\|32466_33885_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|340850

Protein	Function_ID	Function_description	E-value
NZ_CP053452.1\|WP_171468931.1\|43566_46224_-\|DNA-primase	gnl\|CDD\|223435	COG0358, DnaG, DNA primase (bacterial type) [DNA replication, recombination, and repair].	1.08827e-13
NZ_CP053452.1\|WP_171468923.1\|30461_32093_-\|hypothetical-protein	gnl\|CDD\|227897	COG5610, COG5610, Predicted hydrolase (HAD superfamily) [General function prediction only].	1.10286e-21
NZ_CP053452.1\|WP_171468937.1\|64853_65558_+\|glycosyltransferase	gnl\|CDD\|366154	pfam00535, Glycos_transf_2, Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.	6.46564e-33
NZ_CP053452.1\|WP_171468936.1\|52825_64180_-\|VCBS-repeat-containing-protein	gnl\|CDD\|380149	NF012181, MSCRAMM_SdrD, MSCRAMM family adhesin SdrD. Features of this protein family include a YSIRK-type signal peptide at the N-terminus and a variable-length C-terminal region of Ser-Asp (SD) repeats followed by an LPXTG motif for surface immobilization by sortase.	8.31215e-26
NZ_CP053452.1\|WP_171468927.1\|35407_36715_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	2.10441e-21
NZ_CP053452.1\|WP_171475901.1\|42283_43315_-\|site-specific-tyrosine-recombinase-XerC	gnl\|CDD\|234935	PRK01287, xerC, site-specific tyrosine recombinase XerC; Reviewed.	9.29734e-136
NZ_CP053452.1\|WP_171468938.1\|65557_66019_+\|hypothetical-protein	gnl\|CDD\|273628	TIGR01444, 2-O-methyltransferase_NoeI, methyltransferase, FkbM family. Members of this family are characterized by two well-conserved short regions separated by a variable in both sequence and length. The first of the two regions is found in a large number of proteins outside this subfamily, a number of which have been characterized as methyltransferases. One member of the present family, FkbM, was shown to be required for a specific methylation in the biosynthesis of the immunosuppressant FK506 in Streptomyces strain MA6548.	2.7085e-08
NZ_CP053452.1\|WP_171468935.1\|52215_52824_-\|SMI1/KNR4-family-protein	gnl\|CDD\|378155	pfam09346, SMI1_KNR4, SMI1 / KNR4 family (SUKH-1). Proteins in this family are involved in the regulation of 1,3-beta-glucan synthase activity and cell-wall formation. Genome contextual information showed that SMI1 are primary immunity proteins in bacterial toxin systems.	0.00849015
NZ_CP053452.1\|WP_171468926.1\|34074_34908_-\|D-glycero-beta-D-manno-heptose-7-phosphate-kinase	gnl\|CDD\|274029	TIGR02198, Uncharacterized_sugar_kinase_BU060, rfaE bifunctional protein, domain I. RfaE is a protein involved in the biosynthesis of ADP-L-glycero-D-manno-heptose, a precursor for LPS inner core biosynthesis. RfaE is a bifunctional protein in E. coli, and separate proteins in some other genome. The longer, N-terminal domain I (this family) is suggested to act in D-glycero-D-manno-heptose 1-phosphate biosynthesis, while domain II (TIGR02199) adds ADP to yield ADP-D-glycero-D-manno-heptose. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides].	4.15714e-84
NZ_CP053452.1\|WP_171475902.1\|50901_51504_+\|recombinase-family-protein	gnl\|CDD\|365969	pfam00239, Resolvase, Resolvase, N terminal domain. The N-terminal domain of the resolvase family (this family) contains the active site and the dimer interface. The extended arm at the C-terminus of this domain connects to the C-terminal helix-turn-helix domain of resolvase - see pfam02796.	5.31463e-40
NZ_CP053452.1\|WP_171468925.1\|32466_33885_-\|glycosyltransferase	gnl\|CDD\|340850	cd03823, GT4_ExpE7-like, glycosyltransferase ExpE7 and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).	2.35103e-26
NZ_CP053452.1\|WP_171468934.1\|48086_50597_+\|bifunctional-DNA-primase/polymerase	gnl\|CDD\|378140	pfam09250, Prim-Pol, Bifunctional DNA primase/polymerase, N-terminal. Members of this family adopt a structure consisting of a core of antiparallel beta sheets. They are found in various bacterial hypothetical proteins, and have been shown to harbour both primase and polymerase activities.	1.83875e-52

>NZ_CP053452.1|WP_171475901.1|42283_43315_-|site-specific-tyrosine-recombinase-XerC
MGKRGTRQSGKVIGDATDPQGMTALAKAYLEWGRVHNYSELTTDHHLRYLNAFLKWAADRGIAKPSDVTKPILERYQRWLFQYRKTNGDPLSFSTQKCYLVPLRSWFKWLAKHNHILFNPASELELPKQSQTLPKNILTAGEAEIVLGQPDTSDPLGLRDRAILETFYSTGMRRKELIGLKPYDFDRERQTVMIRQGKGKKDRVIPIGERALDWIGRYERDARPKLLVSGKPTDLLFLTHFGEAFTLDRLSQMVKGYIAQAETGKAGSCHVFRHTMATLMLENGCDIRFIQVMLGHANLKTTEIYTQVSIRKLVEAHRATHPAKMPQKTAAEQSSKESKAPPA
>NZ_CP053452.1|WP_171468930.1|41461_42244_-|hypothetical-protein
MSLDVSRAGRMTPGCSPCRSEPASGKSDLLFENLRLGKNAPAATRAGLLRSQTLESIGENESSLRIADYHTYFVGCDEWGFSVWAHNTSAFNKIVESVFKENTVARNEAWELLKAGDRDGFIKALERQGAKPEAIKDILDEIYVSDEIFKAVATKGELYPESWVKWREAPLSEAQLKSKLPFDPKLSTDPIFVVVDGDWNYLMNGNHRTMAARLDGKPIEVLKLTKKQYEALFGEEFKPGNYTSQPGIDPRKPSGTRKPN
>NZ_CP053452.1|WP_171468929.1|40935_41418_-|hypothetical-protein
MMLYHISIKFLPQAWGVTLVAMETGETWSGDSVKLMRPERLHSAPSLHAEAAADWFLSQGAQITSTSPDLLRFSYGDIEIIVSVIENEVCMIECRFGITPRSNKRIDDWVDFVASWPEEWLLRVVDVASGASYSLSDLRSCITATDEWQRFSAKFEWGRG
>NZ_CP053452.1|WP_171468928.1|38056_40264_-|hypothetical-protein
MQAVAISRQPGATPGYYLGDDFGTDDLLSAFTEFGIKRVLTTSEKVVEKLLAAGLEVFTVKLPLGVSVSDYAVRTKDPADALGALLRGAEWAGKGKPTSLPVVVCTATPDAQNGTLTELLEADDEPDTEETLIDNEEDDNEKTDHELEPPQLVVEEQPPVRIASPVPPAPQTDEATVSENEVVLTFGTRKYRVRGLEKNATPDVLKVNVLATNGVGMFIDTFDLYSAKHRTGFLAQTATELNVEEATVKADIGRVLLKLEELQDARLRQNQPTTTAHSEMTAADQNDALALLRDPHLLDRIVNDFAVVGDRTNKLVGYLAAVSRKLDQPLAVLIQSTSAAGKTTLMEAVLNFCPPEDVVKYSAMTGQSLYYIGDGGLRHKILAIVEEEGAAKASYALKLLQSEGELRIASTGKEGNTGRLTTQDYHVAGPTMLFLTTTGITTDEELLNRCVVLTVQEDREQTRAIHDLQRRRQTLDGLLAANSHQNTLALHRNAQRLLKPLLVVNPYAERLTFPTTRTRTRRDHQKYLTLIRTITLLHQHQRPVRTVEHNGKPVEFIEATVEDIAAANALASIVLGRCLDDLPPQTRNLLGLLDAFVNDQCRVQRVERADFRFSRRQVREATGWGDTQLKIHLKRLTELEFVGVHRDRQTNRHAYELLFACDDAGRVLPELLNVDELRRAEAGCEPSRSDSEAERMVASRGLVGSLSEVCRGGEIGATTDGVCNTGTPHEITSKT
>NZ_CP053452.1|WP_171468927.1|35407_36715_-|tetratricopeptide-repeat-protein
MDPTATDLHNTLGVALAGCERFAEAEAAYREALRLEPRNVSAHSNLGNTLRSQGRLAEAEVSLREALRLKADYPEAHNNLGIVLVQQGREAEGQKHYEEAVRLRSTYAEARMNRSLSWLADGDFVRGWPEYEARFRVNRKHKPPPGPRWDGAPLGGQILLVTSEQGLGDSIQFVRYLRPAKERGGTVLFDCPEPLAALVATCPGVDRVVSRGKGVTYDTHIPLLSLPALFGVPPEAPTAPVPYLTPDPARVDHWRRELAAVPGLRVGIAWQGSAAHKGDKLRSVPLTRFGPLAAVPGVTLCSLQKGFGAEQLAAPEAAGLGIVDLGARTASDMADVAALMMSLDLIVAVDTALVHLAGALGRPAWVALPFAADWRWQRHAETTRWYTSVRLVRQGAWADWDGVFARLTADLAVAARLKAEGRWTGTLAPADGAGP
>NZ_CP053452.1|WP_171468926.1|34074_34908_-|D-glycero-beta-D-manno-heptose-7-phosphate-kinase
MSRAAERPAPPDWPAAVAALAGGRLLVVGDVMLDEYVAGDARRVCPEAPVPVVEAGRHWAVPGGAANAAANAAALGGRVLLSGATGGDPAAGALARAVEATGVDPAGLVADPDRPTTTKLRVLARGQQVIRVDTETRARLGSEPAARLAAWVERTVPAVDAVLVSDYGKGVFEGDFAARVIGAARRAGRPVVVDPKGADPHRYRGATVVKPNVSELADLTGRTLRTPADLVSAAHGLAEALDGTWVLVTRGAEGMALFRAGRPARRAPPARPAGCST
>NZ_CP053452.1|WP_171468925.1|32466_33885_-|glycosyltransferase
MTPDPAPGGGCRPVPPVLLFASYHAYLDHSSGAALATRDLFEALSARGWSCRVVCGPALDYGDGRGPAEVLREHQIPHHLERCAPPTGERYELFHYALNGVPVCQYRPETFAPHRPATRAQGVPFLDVVSRACARFHPDVVLTYGGLPFAAHLMRRVRRAGARVLFCLHNFDYRDPELLRAADALWVPSEFARAAYRARVGVDAAAVPWPWDHARVRAERADGRFVTFVNPVPVKGVAWFARIAAEAYRRRPDIPFLVVEGRGGADGLRRLPIDLSALTNLNVMRSTPRPGAFYARSRVVLMPSLWEETFGRVAAEALVNGIPVLATRRGALPETLGGAGLLFDVPGRYTEPARMSDVPAPAEVAPWVAKIERLWDEPAFYAEHRERALERARVWEPERLCAGAGAFLKRVGRGAPDRRHRTAAAGTGAGGLSRRACGTRAPAPRSRAGHRRNTPVPRHQARPSKRWFGSPS
>NZ_CP053452.1|WP_171468924.1|32218_32416_+|hypothetical-protein
MPGVGLGFDPQVGRAPGEAVAHERGVPVQVEEDVPRVPDPAEHQRVEDVERDHPGGRQRTVEGVP
>NZ_CP053452.1|WP_171468923.1|30461_32093_-|hypothetical-protein
MLLCRPNPRLRDLFHRAVGTGKPVVALSDTYHRRSLLVRLLEAVGTPLPADAIFASSEWRVNKQSGHLFDAAFNTLQVAPAEVLHVGDHPVSDFRTPRTRGVKAVLHGHHGTGHLRTAGAAPDAPLRSLLRAHASYAARGTLAPGGFWWQLGHTTFGPLMVGFALWLRQRFRADRIDRAYFLLRDGEIFHRVFEALFPPAADVPACSRLAASRRAYVFPVLDGAPDFVLPNLTVCAGPRPVGEFLDRLGVPAAAYGDDFHACGFRDPAERIDGRREGPRLLALFDRPRVRQALLETSRRERECLVGYLRQQGVLSAGRVALIDLGWHGTIHKAAQLLATAFGTGPQITGYYLATFPKFRNVAVPHLRARAYLGGPGDTDPLVRAIATAPQLLEIVCSSAAGSLLHFARSGHGFDPVLRANPAGADQLHALGEVHAGTVAFAREYRDTPAALRADAIPPALAAEDLLRLLTNPTKDEATRVGGLAHGDDFGTDAVRYAARFRPTSDTPEAVWEDYLHAFWKPGLLNQPSPQGAVLRTLLWLTQD
>NZ_CP053452.1|WP_171468922.1|28985_30008_+|hypothetical-protein
MTTLARIEANQRNGLLSTGPRTAEGKAVVSRNATTHGIFAAVPVLPGECPGAWETHRAGVVESLAPVGLLEVNLAERAALVLWRLQRLARYEAETMAAEMEDADVPPLPPPEDDFSTLDPPTAPKTREGQLRDIRRELRTARQELSEVIPARDVFAAEADASAVVAFEVAESVLEAACSRAESAGNLRTDPPAFASKPFMRRLGLTGADARKVKWSVDLIRRGVLLYAGFTEEPAETFLESVRNDLDAWADERARTVRRLEGEAVAVVRLLDGAGARTHAAKLLLGDGRDERIAKYERHLHTLLTSTLHELERLQARREGQSVPPPAVADVTVAIGPRTE
>NZ_CP053452.1|WP_171468931.1|43566_46224_-|DNA-primase
MPDLTLDSSADDPKLLAQIVAYYHQTLKESPDALAYLRKRGITNPAVIDHFRVGYSDRTLGLKLPIKARTAGAVIRERLHRLGLYRESGHEHFHGSVIFPVAAADGTGRIVDIYGRKTRTDLRAGTPLDTHLNNDKLGVWNVEAFAGAAEVVLCSSLFDALTFWNHGCRNATTMFGTNALTDDLLAAFKEFNVRRVLTTDEKVVEKLLVAGLEVFLVRLPLDTDVNAYARQTKDPADALGSLLRGAEWAGKGKPTSAPVVACTAAPEAQNESLSELLGDDPDEEDESEPGEGTDHETNPPVLVIEEQAPIRTASPVPPAPQADEATVSENQVVLTFGTRKYRVRGLEKNATPDVLKANVLATNGVGMFIDTFDLYSAKHRTGFQAQAAAEMNVEEATVKADIGRVLLKLEELQDARLRRNEPTTPVPSQMTAADQNDALALLRDPHLLDRIVNDFAVVGDRTNKLVGYLAAVSRKLDQPLAVLIQSTSAAGKTTLMEAVLNFCPPEDVVKYSAMTGQSLYYIGDGGLRHKILAIVEEEGAAKASYALKLLQSEGELRIASTGKEGNTGRLTTQEYHVAGPTMLFLTTTGITTDEELLNRCLVLTVQEDREQTRAIHDLQRKRQTLDGLLAANSHQSTLTLHRNAQRLLKPLLVVNPFAERLTFPTTRTRTRRDHQKYLTLIRTITLLHQHQRPVRTVEHNGKAVEFIEATVEDIAAANALASVVLGRCLDDLPPQTRNLLGLLDAFVTEQCRVQSVERADFRFSRRQVREATAWGDTQLKLHLKRLVELEFVGVHRDRQTNRHAYELLFACNDAGHVLPELLNVAELRRAEVGCEPSRSGSEPNQAVVGRGLVGPMSGLCRAEEIDATTVSIGNTGQTNRIESES
>NZ_CP053452.1|WP_171468932.1|46574_47507_+|hypothetical-protein
MTDDAKQAAWREYCRQLEAIGVDPYAPDLPADDPRHAQMFAIVTEYEAATTHKLALPPNWEGHDPIQPVDSLPNVAEWLAFQWRLVKGWELAGDKAKPSALEDAARTIRNAFRVLDWLGVDTRPERPRPTTDLEAAKKQIDALEQWVREKHKSGWEPTPNKADPAPAPTTKKHPKRDEVPDDYEANIRIKKYLDIHPKATIRDVAEEVGLSIGKIAQLDAWRRVMAERKAAKPAPNRSERPLTDKMLAATGKEDDPSEKVIEDEAIFRWLLEKAQPKERAELHMKTPSERATLIDMVREQYQEERAESDG
>NZ_CP053452.1|WP_171468933.1|47606_48008_+|hypothetical-protein
MEQRSNALSQWAGFDVENSKMKLKVSGGVPEGSYLAKFTKVEPTTNGFGPGLKWAWEITSGANTGQSVICTTSNSPSPKNRCGKILSGMLGKALNTGEEFDTSTLVGQNFLVIVRKSETGGTFVDSVTKAPVA
>NZ_CP053452.1|WP_171468934.1|48086_50597_+|bifunctional-DNA-primase/polymerase
MNNTNVLLDAALNFAARGWAVIPLHTFADGMCTCEDPTCTSPAKHPLTPNGVHGATTDDAIIRGWWAEADIANVGIATGNGLLVLDIDAKHGGLASLAQLEVRYGRLPTTPTVATGGGGKHFYFRLPTGTKIGNRAGIAPGIDVRGDGGYVVAVPSLHSSGQRYEWLVTPDTPLAEAPDWLLTMLRTNAPPRPTPVPKTDAITLIVPPASPDLANHPGAGEGERNATLCKLIGVHLARGDSAESIEPLAMAWRDRCSPPMSEAEVLRTLNSLAAKHQRSVPVTSPTDSDDLDGVQLPDPPHWPTLDEAALHGVLGEMVRTLEPETEADPVGILLSMLVAFGNAVGRGPHFPVEGDHHHANLFTILVGDSSRGRKGTSLGRTLTLFGDADAEWKRDCHTTGLSSGEGLIFAVRDPVESLEPVKEKGKITGYQKVLKDQGVTDKRLFVVEPEFAQTLKVLKREGNTLSPVVRQAWDSGALSVMTKTNAARATETHVSILGHITRPELAKCLSDTDCFNGFANRFLWALVRRSKLLPDGGNGLDLIPLKQKLAKVVAEAKTIPAMSRTPDARNLWHQLYPELTAEKAGLYGAVVGRGEAQTLRLSMLYALLDGSPQIDVPHLQAATAVWRYCETSARLLFADGPGETGDPLEQLLLQTIRREPGINRRGLHKAIGGHLPAKELVQALARLRDRNQVHCELVATGGRPSECWSPGSAPKPVCVVVPTVTDDERASTSHSSGSPPPPAPVPPCSPVKMSLTQLFDAVNAIGGKFRHDGHRVIVDAPGPTISPAILAAVVDHQGWLASVYSPPPKSVISDALPRNTGDELTEGEFYAELQAM
>NZ_CP053452.1|WP_171475902.1|50901_51504_+|recombinase-family-protein
MAVGVYLRVSSAKGQETRSQEPDLQTWAKAQTDEVVWYRDRFTGTTMERPGLDRLLADVRSGKVSKVCVWRLDRLGRTAKGLLTLLDELQVLGVGFVSLREGFDLATPAGRLMAGVLASVAAYETEVRKERQLAGIAKAKSEGKTWGGRKAGTRVRLTEEKEAVIRQLHGQGKTVASIARTVGLTRKTIYRALSQVTANS
>NZ_CP053452.1|WP_171468935.1|52215_52824_-|SMI1/KNR4-family-protein
MSGMTQEYSEALIAAHDHLVAKGVPFNNGLTDEEVRSIEDRFAFRFPPDLRAFLQYAIPIGKGFPDWRGSDRHLWEMLRWPEEGIIFDIRNNVFWWPDWGDKPSEESAAVEIATTRLRQLPPLIPVFGHSYLPCAPLEPGNPVFSIHQADVIHRGRNLSDFLLWVHHDPADESIESKYPVYEPDYRHIIFWTDLTRKNYDLS
>NZ_CP053452.1|WP_171468936.1|52825_64180_-|VCBS-repeat-containing-protein
MRFIAFARQARAALTFVARRTPAAFTLIDRLFVYRSAYREPGDYSAGFDRVRLELVPLEARALLSGTPVPGPVVLAAATGQVNAYAAGTGALDFSITPFAGYSGPLNVASGDLNGDGVPDVVAAEGNGGGPLVRVFDGTTGAALAGAFGGFLAFEPSYTGGVQVAVADVNGDGVPDIIAAAQRADGAEVRVFSGSDGSELADFTASGVAFAGGFSLAAGDFTGSGRADVVVGGAGGWVSVYDPLSGTQLSGPLGGFAAFGPGYTGGVVSVAADPLAGVVNPGATSELAVGTGAGVTTEVKVFNARGAVLQDFEPFGASDTAGARVALAYISNPTAPTVPDVVVGSGAGGADAVRVFRGTTGAPLSGAEGSYAPFGSDASGVAVAASNDPSGSSGSSGSSGSGSSVSGEVWNDANDNGVLDPGETGIAGVTVELLSGSGALLVTTSTNASGGYAFAGLGAGSYQIEAVTGGTVTEQPGVFTLTVNQQLQNENVGIYLGGSGSSGGSGSSGGSGSSGGSGSSGGSGSSGGSGSSGGSGSSGGSGSSGGSGSSGGSGSSGGSGSSGGSGGSGGSGSSGGSGSSGGSITISGVVWYDNNIDEVQDDGETGAPGVTVTLSNPGIVYGTAVTDASGHYAFTMSGAGTYTVNFGPQPGYDYDTPGPLFFFTGAAFTNVTVTSGAVGTVSAGLVERASIGSHVWYDTNDDGVQDGTEPNASGVTVSLTGGGSWAGGGSWSVLTWNTTDASGNYHFTEPPGTYTLTFTAPHGYGFSTPTGGVTTQTVTAGEVDTAADAGLFYTLASIGSNVWDDLNDDGTQEAGETNMAGVAVALTGGSLTASLVQTTNASGDYDFTALPAGTYTVTFTAPPGDVFSTPTGGVSTQTVTAGEVDTAASAGLVDAQTTTTLVADPVTSTEGADVTLTATVTPAVAISDEPPTGEVTFTDAGVTLGVAELNGLTGADRAVLTTAELPLGNSTVTATYGGNAVYLTSSGTTTVAVTAPAETWGLDAEIPETEPEQGAYLLSLGQDQVDLNRGAVRATVPLDLAQSDFGRSAASFALVYNGATVQPLLVESELDGEAAAGTPTAVYATLIIDGTAGSPVSVPLTGYVPGDPFAMPAILVPPLSTGAHTWELEVQVDESGGGTATETVTGTVTYVNRVGSPYGSGWGVSGVDQLVPTTGGVLWVSGDGDARLFAGTGTFTSPAGDYGTLVATGSGYTYAAYDGDTEVFNTAGAETRLTYPTALGWTFTYATSGGLAAVTAPDGGTSTFSYGGSSGLLSGIAEPGARALAFSHTGADLTGITDVDGSARTLGYSGTSHLLGSDAWAPWAAAFSYNADDQVDAAALGGGTEDYTITPANALGVAAVTDGDGDVTTYYLDSLGRRVAEAQPGGVDQAWSYTPGGLVTAFTDARGQTTRYAYASGQLTGVTNANGSTESYTYGGVDNQVSRAADEDGDVTAYGYDAYGDLTSATTGYGTTAAETTSYTWAGGLMLTATDPDGNTTTYGYNAQDRVTAQVTTTPGAVVVDDEAFTYNGAGYLATSTAGVGATGAATTSYTYDGKGQLLGRTNPAGDATSYTYAAAGDVLYETDGNGVGTGYVYNGADERTAEVDDANQAVPEPRTFTFDPAGNETRAVDANGNLTVDTYNADGWLLTAKTYNASGTLFGGHTYTYDADADVLTDTDGDGNVTRDTYDAEDRLVFAGTYGSGRLIRSEADTYDGDGNPLTATDGDGNTTSYTYDADGNVLTRVQTASGTVVSSATYTYDADNNVQTDTGGDGNVTSYAYVGNELTALRKYAAGGALVASGAYSYDRKGNALTSTDGNGNVTAYAYDGDNRVLSTVVRSAAGTVVSSGADTFDNDGNVLTDTDGDGNVTSYTYDANDDVLTEVVKTSAGVLVSSAAYTYDDDGNELTGTDYVSTGAVGRETVNAYDPNGNVLTSKQYDGSGALIGSVVNTYDLDGNIGTSTDGNADVTDYGYLGNELVQEVVTNSSGTLVRASGYQYDLAGKVLVSNDGNQVYTFNAYAGDELISTTERASDSPSGAVISSASYTYDPDGNVLTATDALGNVTKSVYTGDLLTSETVRYGTTLAATTSYTYDGDDNVRTVTDPNGNVTSYAYNGDNDVTSTVVKNSGGAVVTSDTKTYDGTDNVLTDTDADGNVTTSVYAGNRLVSTTTTDPGGTVVAGATYTYDGDDNVLTVTDHLGVVTRDTYDGDRLVSETVRYGTALAATTSYTYDGDENVATVTDPNGNVTAYAYSDDQVTSETVRASGSGGPGTGPVVRSSGDQYDAAGDVTQETDGAGNTTTNVYAGGRLTYSETTDPSGHLISSASYTYDGADHVLTATDGDGVVTGYAYTGDRLASETVRYGTTLAATTSYTYDGDDNVATVTDPNGNVTSYTYNGDNDVLSTVVKTAAGTVVTSDTKTYDGTDNVLTETDGDGNVTSYTYDGGRVAYTQTTDPSGHLISSISYTYDGAEHVLTATDHLGVVTGYAYAGDRLASETVRYGTTAAATTSYTYDGDDNVATVTDPNGNVTSYTYNGDNDVLSTVVKNSGGAVVSSDTKTYDGTDNVLTDTDGDGNMTSYTYDGGQLTYTQTTDPSGHLISSASYTYDGDNNVLTTTDHLGDVTRNVYTLGRLASATVGSGTTAAATTSYTYDGDGNVASITDPDGNRTSFTYNASGQVLTTTTPLGTTTNTYDGNGNRTSTVDPLGRKITYAYDGNELTTEAWYNSGGTVTDTKSYTYDADGNMLSAGDASGAYTWTYANDRVATQKDPNGITLTYGYDSDDHVTSISDSQGGSTTLGYNADGQVTWEAYQNGATQLRVNVGYDPAGNVTSETRYSNAAGTGTAVGTTTFTYDGNEETGITATDATGGVVSSYGYTYNAAGELATQTANGTTTGYTYDATGQLVQAGATGYGYDANGNPTGTGHTIGTDNELSSDGTWNYTYDAAGNLTAEVGVSNGLTWNYTYNDANQLTSAVEKATSGGTVLESASYVYDVLGHLASESVTASGTTTGSHYAYTADGTLYADVGTGGTIGTRYIAGAGGADTWLARVTGSGGAWLLSDYEGSITRVVALTGGVQDAISYDAWGNVTGETAPGARGALGFQGGRSDAATGNWLFGAREYSPTRHDWTTQDPSGFGGGDSNLNRFVGNGPTDGTDPSGLQYIVTYQERGADQIINLMRVHAKIKVSKEKLPSGNYLLQATELLPGAVGQNIGETVKSILGNTKDTKNDKANQFWRQVLTAFQPDGPNLYFGGASSSEGASGFRAATIGDFENFVWDRTSMSPSKNASLAPPGGANSGGTSTTSLGGEPAPGPAGPLLNPAKALAVLFFAPDEILQRHSWEGDFSTFGQYPTARPPSVPLSAIQNPVSVPWDPREDLPVRGAPIPGEGLLPGGNAFRGGSIARGATEGAATRVVAAERTAARGTAAERTAAEGALASSVVKGPNCFAAGTPLLTPTGSKAIDQFVPGDLVLSRDEFDVDGVVAPKVVEEVFARTGKIIQVHVGTRAIDVTSEHPFWVHSKGWLPARELIPGDRLVGHDGQWSVVKQVVDADQWATVYNLRVADFHTYFVGCDEWGFSVWAHNTGGCDVWAALGGKAEEFATLPKAKQDALNAIAEAANNSATSRTTLRDMLREVEGANGAKPNGSNAMSLADDLIAARPKPGTPAASTAAQAPTEAVVRQSTLADLTPAQRQRIENKLVDIEHVQNGQRAPSGQWSERDGIVFNNREGLPASTKGYLEYRVPGSDGKPSGARIVINQDTGQIYYSNHYNADGYGFTEIIGTTNKVLGKK
>NZ_CP053452.1|WP_171468937.1|64853_65558_+|glycosyltransferase
MSHSAPLVSIVMPVFNGARFLDRALASLRAQTLGDWELLAVDDASTDDSATRLDACARDPRVRVFRHPVNRGQAAARNTALAAAAGELIAYLDQDDEFYPDHLARAHALRDRADVLLFRYDLVEERPGHPGFGGATAYDPGARLWALFTETIAVPLGVVHRRALLARTGGFDEALGRYQGSDEDGDLWRRFARAGARLLPVPAKSGRYHVRADSFARTRPRRRRARRRPPPRPR
>NZ_CP053452.1|WP_171468938.1|65557_66019_+|hypothetical-protein
MSFDVARGPTRHTVTMPPADGWVMGRVFDQHTYGGLAPAWLSRAPTVVDVGARCGAFAVYAHLMIHPAAAIHCFEPNPTRVGHLRRNLAAVPRATVAPFGLGPADAPADPFPAPGSRGGHATGPARTPAGRVPAHSGTPPRYGTSAAGGRWTY
>NZ_CP053452.1|WP_171468939.1|66006_66228_+|hypothetical-protein
MDVLKIDAAGAEADILDRLGSRLARTRVVLVDYSRGSLRRQVDALLTGHELFGAVVRSPAAGTLKYVRADLLG

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Crispr_ID: NZ_CP053452_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053452_2

824998-825081

Orphan

Consensus_repeat	Method
TCGGAACGGCGTCAGGATCGGCTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP053452_2

>merge|NZ_CP053452|2|824998-825081|CRISPRCasFinder
TCGGAACGGCGTCAGGATCGGCTATAGCCAGTGGAACGGGGAATTCGGTGCTGGCCTCGATTGGAACGGCGTCAGGATCGGCTA

>NZ_CP053452|2|2|824998-825081|CRISPRCasFinder
TCGGAACGGCGTCAGGATCGGCTA	TAGCCAGTGGAACGGGGAATTCGGTGCTGGCCTCGA
TTGGAACGGCGTCAGGATCGGCTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053452.1\|WP_171469486.1\|817527_817776_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171469489.1\|820823_821432_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171469497.1\|826441_828958_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223021
NZ_CP053452.1\|WP_171475941.1\|830082_832275_-\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP053452.1\|WP_171469504.1\|838436_839720_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|130981
NZ_CP053452.1\|WP_171469501.1\|836608_837007_+\|response-regulator	unknown	unknown	gnl\|CDD\|333815
NZ_CP053452.1\|WP_171469494.1\|823650_824166_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171469493.1\|823484_823670_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171469498.1\|829013_829895_-\|NPCBM/NEW2-domain-containing-protein	unknown	unknown	gnl\|CDD\|377970
NZ_CP053452.1\|WP_171469487.1\|818006_819071_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372582
NZ_CP053452.1\|WP_171469490.1\|821434_822019_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379276
NZ_CP053452.1\|WP_171469488.1\|820202_820718_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171475940.1\|819096_819858_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274730
NZ_CP053452.1\|WP_171469502.1\|837110_837383_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171469503.1\|837847_838174_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171469496.1\|825402_825771_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171469500.1\|834791_836282_-\|protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP053452.1\|WP_171469499.1\|832529_834710_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|274350
NZ_CP053452.1\|WP_171469492.1\|822760_823495_+\|NAD-dependent-epimerase/dehydratase-family-protein	unknown	unknown	gnl\|CDD\|274028
NZ_CP053452.1\|WP_171469491.1\|822040_822592_+\|methyltransferase	unknown	unknown	gnl\|CDD\|227069

Protein	Function_ID	Function_description	E-value
NZ_CP053452.1\|WP_171475941.1\|830082_832275_-\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	1.78028e-43
NZ_CP053452.1\|WP_171469504.1\|838436_839720_-\|hypothetical-protein	gnl\|CDD\|130981	TIGR01926, peroxid_rel, uncharacterized peroxidase-related enzyme. This protein family with length of about 200 amino acids. One member, from Myxococcus xanthus, is a selenoprotein, with an otherwise conserved Cys replaced by Sec. This family is drawn narrowly enough to suggest that These proteins contain a domain described by TIGR00778, with a CxxCxxxHxxxxxxxG motif. Some members of that family are known to act as peroxidases or correlate with resistance to oxidative stress.	3.99449e-09
NZ_CP053452.1\|WP_171469501.1\|836608_837007_+\|response-regulator	gnl\|CDD\|333815	pfam00072, Response_reg, Response regulator receiver domain. This domain receives the signal from the sensor partner in bacterial two-component systems. It is usually found N-terminal to a DNA binding effector domain.	4.75063e-17
NZ_CP053452.1\|WP_171469498.1\|829013_829895_-\|NPCBM/NEW2-domain-containing-protein	gnl\|CDD\|377970	pfam08305, NPCBM, NPCBM/NEW2 domain. This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins. This domain has also been called the NEW2 domain (Naumoff DG. Phylogenetic analysis of alpha-galactosidases of the GH27 family. Molecular Biology (Engl Transl). (2004)38:388-399.).	9.34839e-15
NZ_CP053452.1\|WP_171469487.1\|818006_819071_+\|hypothetical-protein	gnl\|CDD\|372582	pfam13369, Transglut_core2, Transglutaminase-like superfamily.	0.00148683
NZ_CP053452.1\|WP_171469490.1\|821434_822019_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379276	pfam13578, Methyltransf_24, Methyltransferase domain. This family appears to be a methyltransferase domain.	2.95847e-13
NZ_CP053452.1\|WP_171469497.1\|826441_828958_+\|hypothetical-protein	gnl\|CDD\|223021	PHA03247, PHA03247, large tegument protein UL36; Provisional.	2.34008e-07
NZ_CP053452.1\|WP_171475940.1\|819096_819858_+\|hypothetical-protein	gnl\|CDD\|274730	TIGR03696, tRNA_nuclease_WapA, RHS repeat-associated core domain. This model represents a conserved unique core sequence shared by large numbers of proteins. It is occasional in the Archaea Methanosarcina barkeri) but common in bacteria and eukaryotes. Most fall into two large classes. One class consists of long proteins in which two classes of repeats are abundant: an FG-GAP repeat (pfam01839) class, and an RHS repeat (pfam05593) or YD repeat (TIGR01643). This class includes secreted bacterial insecticidal toxins and intercellular signalling proteins such as the teneurins in animals. The other class consists of uncharacterized proteins shorter than 400 amino acids, where this core domain of about 75 amino acids tends to occur in the N-terminal half. Over twenty such proteins are found in Pseudomonas putida alone; little sequence similarity or repeat structure is found among these proteins outside the region modeled by this domain.	2.8609e-09
NZ_CP053452.1\|WP_171469500.1\|834791_836282_-\|protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	1.23193e-40
NZ_CP053452.1\|WP_171469499.1\|832529_834710_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|274350	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.	4.04977e-29
NZ_CP053452.1\|WP_171469492.1\|822760_823495_+\|NAD-dependent-epimerase/dehydratase-family-protein	gnl\|CDD\|274028	TIGR02197, heptose_epim, ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides].	3.25322e-59
NZ_CP053452.1\|WP_171469491.1\|822040_822592_+\|methyltransferase	gnl\|CDD\|227069	COG4725, IME4, Transcriptional activator, adenine-specific DNA methyltransferase [Signal transduction mechanisms / Transcription].	1.32636e-32

>NZ_CP053452.1|WP_171469494.1|823650_824166_+|hypothetical-protein
MSQYDPDYPNSAANPFYHIVVGGGSGGGGSGILEATGVNAEQAPVGNLQVSQVITDLVGKLITLPYCNPEAMVSGTGSATNTANTSVIAAQGSGVRIYVTSIVITNTSATNTFVNILDGTTTKLVYPAAAGGGAVHTLAVPLRLSANSALQFSAGNSASTVYVSAIGYTGR
>NZ_CP053452.1|WP_171469493.1|823484_823670_+|hypothetical-protein
MENNYWLNKAEEKDMLRARMAAKLITVIVRDTILADVSSIIDKAIENEPARAKYPHEPIRS
>NZ_CP053452.1|WP_171469492.1|822760_823495_+|NAD-dependent-epimerase/dehydratase-family-protein
MPKDYETLIHLAAITDPQTANEADVFRVNYAEAVEFFERALVAGVKRIVWASSASVYGDGPAPQTEGQTVRPLTAYAESKALLEVSAARLSAKYGVPMIGLRFSNVYGPGEAHKGKSASVVYQLVRQMRNGERPRLFWHGEQSRDWVSVHDVCRAITLATERGGSGVYNVGSGVATCFNNVVATINEQGRLDLTPDYIPNPFKGYQSYTKLDLTRSGAHLGYVPQVDLVNGIRELLTSEEINGK
>NZ_CP053452.1|WP_171469491.1|822040_822592_+|methyltransferase
MSKLFSTILLDPPWPETKIGKFDETRHKRADEPPYSTLSIEDIAALPIGDLADTSCNIWLWTTSRSLPDGFDLLRRWGFKYLNTVTWVKPSGFGAWWVNRTQIMLMGYRGKLVMNEKYRPNVLFAPSRRHSQKPENSYELIERVSPGPYLEVFARTQRSPEWVAIGNEIDGKDIRESIAGFLN
>NZ_CP053452.1|WP_171469490.1|821434_822019_-|class-I-SAM-dependent-methyltransferase
MEKVKSKLFTTDKEIIGSLLNPVDANQWFVCSNQIYHWYPPIAEAIRPRSIGEIGCRWGYSLKALLEGWSDVNFVVGYDFETYQPGSNDYCRKHLAPLFPKIPFTFHNQDTQKLDTLGNVCFDLFSVDGDHTTPGAYHDMNLVWPHIEDGGIMMVDDLTDTRVHQAWAQFTREKGLVGWYVPTLHGLGLVRKEG
>NZ_CP053452.1|WP_171469489.1|820823_821432_-|hypothetical-protein
MPEFFMTIQTVASRKQCLEDTLKSLAETDWSISPVIVEDTANLPNKEASQGVTGGKVLSTALAVPGWDYLLACEDDVIFNKNLRHNLTEWAPVKHGICLVGTLYHGGEVYSDTAKGYGMAPCGLIAGSQGVVIRRDWAEELLRRWGALKRHGMTDLRFFRSLDAVFPFVFVHNPNLVQHKTEPSIWGGPKHTTSNFSPDYKS
>NZ_CP053452.1|WP_171469488.1|820202_820718_-|hypothetical-protein
MAKKPSKSDELAAAIHSASQPEKPATPAPAPATSGFTPPDNFAGFIKEVVTKIGHKSGKADVLAGITAQHGAEAAKWAEEKSGLSVAINNANKAAGFSGDDASPRKASAPSSSGEPTLADLMHAQDTLYTLGMGAEQLLKLVAELKSFGDLNTLEACLTAIIKIQTSGRAK
>NZ_CP053452.1|WP_171475940.1|819096_819858_+|hypothetical-protein
MGRWLTPDPIGFAGGDANIYRFEGNDPENHVDPSGEKIVALKSKSIVPDDSMVFVYIPDSYGGDINDYVSQIYPQYKIYMYDKDFNDKVLKEAFPLRFFISGAAKDSQLEKEIAAILTIAKGASVPVAIPGLGSEMGNPEKYGDPCVRWTKKVEDAWTKLTKGRNTTLKFYRMELRYPSNTSEKHSIIILSYKLNGNTSLLGLDIGSVNAVMGNDTRYTSFFFDPNSAAADGKLNKEFTEDLAGWLKAMRGQK
>NZ_CP053452.1|WP_171469487.1|818006_819071_+|hypothetical-protein
MQYPLIPHWRKLALLSNGELGRYDVADVHLSCAEGLPGADEIDRNYCLYKLDDWKDRVKEYTTLLMPQFRRKPREYENSEAYFRALAMITVLQRDCGVRYNPAKIPDDVPFGTADCFIHGIIQGEGGTCASLPVVYAAVGRRLGYPIKLVTTRAKKGGHLFVRWDDPKTGERFNIEASGHGMGTPDDDYFREGLYDVSPEVEVDGCYLQSKTPRMELAGFLSSRAFQWSFVRDWWRCVDAWAWAAALVPENKLYRNSLKTSMIEWDKEQRARKPIGFPHLLVRAIKRQFPESLPLELEKDICGLTATHNMLSDPRLEEKYWKPMRSGVCQRAPYQAVADFAPDTSFLINLHFHA
>NZ_CP053452.1|WP_171469486.1|817527_817776_+|hypothetical-protein
MQKIRVVGVHHMANAVRLMVNTLHDAEWLAENARLAGFVASVKPPKDGNSATELHYVLIGGKVDDLRTYLTGNSELELPQSW
>NZ_CP053452.1|WP_171469496.1|825402_825771_-|hypothetical-protein
MADTDKPDEYPAKYATEVLIRAHEFIGSLLAAGNAEAIVSGVKKLAKGGFVAPLKDARVPSELADDFGEALPKWPVPEKVEDVLNTYKQYELVAKRRKLSDGEKAELGKLVEAVQILLAQNG
>NZ_CP053452.1|WP_171469497.1|826441_828958_+|hypothetical-protein
MSWPLSHEFNEAVQHPRTAFADPDLQSTEAVVGATGLPLPRSGNFADVYQMRGADKRDWAVKCFTRPVVGLAERYARVSEALAAANFPFTVGFRFLAEGIRVGGQWRPVVTMEWVEGLLLNQVVRENAARPAVLAALGLMWVKLCKRLRETGVAHADLQHGNVLLVPGSRPGAYGLKLIDYDGMYVPALANTPSGEAGHPSFQHPARTATRAYSPDVDRFPHLVILTALQGLVTGGSALWERHDNGDNLLFTEADFRAPHESKLLRELWLTGDPAVQSLVGRLAIACGKPMPQTPWVDELAPEGKPAPLDNDTYRAAAAALGLARPVPIPLPPEPTAPPLELPDHFENLEVAPAPSPEKPPVPPSGSGPLVQAAKSSPKMKGLSKSGSGEKPVPAAVRRAEPERTPRTRTDESERGRNIAGWQIVVAAGVMLVAIAGAVLALRNKPVETAERKPDEEPVNAQTPTPPPVPTAPKEQATRPPDPKPKEPDRTGPKVKTPDPPPKPKDVPPPPVVPEPAVLKPRWTATAGTDGARAALCADAHTVMVGSARSTLITLDLATGTKRPQSAWYGLTGGDNFCTLDDGRVARCTPDETELPTWEVKTWKTTEKIRVPAIPAGSGTAKHAMARPSPDGRFLLVARTASAPGVSPPVPLRVFDTRSEKAVVETDWTCGSAHYTADSLRVLVAEHGGKFRWFQLPAGEPDGDWNYGPPPAGRAHAVTSVNANGRVIGYNGPAKFDADSGPCFIDGKSGTVLHRFGPPYSSRSPVVLSADGRAAAVLKEPVGAEVTIDVVGVPKGEVIARATVPTSGGSPTIFLTGDSRVLLAHDPKTGTLWRFDLP
>NZ_CP053452.1|WP_171469498.1|829013_829895_-|NPCBM/NEW2-domain-containing-protein
MPAALRLAVPLVVLLGAAAVPGRAADADAVKEKLFQAKKTYDVELQAFRKAVEDHLNKREDEVRNSGTKKLVDQARAERDRFVSAGEAPPNLPPAVQNPITTARAALNAAYTDAVKEYVRIKEDEAAEAAENEQREFRFTSALAFGKRTHLASLRHYDLKCSNGWFSNNGVCPNKKVKYQVNGEFAPHSIFLHPPTKGTGQVKYPLGGSWTALRATVGVPKIEDNAGHPASALTFEVLGDGKSLWKSEPVTRWNEYQSFAVKVEKVKTLTLLVHSADQAEWARSVFVEPVLFE
>NZ_CP053452.1|WP_171475941.1|830082_832275_-|serine/threonine-protein-kinase
MSVSYKCPSPACGVALRTPLRVPSGKSVACPKCGFRFVAEQLGAGDSVVPSTAPRVADDPPVTREQGDADRARLGPQLAIQATDPIRLDIQPGDQVPGLSSWLLERQLGVGGFGAVWLARHEWKPEYRAVKFCTHPDARHRLVTHEKKVLVRVMKHAGDHPNIVPLLECNLSGETPWLMYEYVEGGTLADAVREWQARSQPKRISKAVKALFMIAAAIGHCHRLATPIVHRDLKPANVLRDQNGVLRVTDFGIGGAAVAHLADGQTGGFQTNSGRVPTLLRAAGSFGYASPQQRNGDPPDPRDDVYALGVLAFQMLLGDLTLWPCPEMADDLRALGLPRGVIALLVNSVAHNAARRPADAHEWRVALEALTTRSHGDRARRSARRPRRPARSAPGTRTSHRRDTHRGPVRFLFSPQGRRRGPRARSRAFNAAAPTQNKRPLNRWKELTSPDNRLNIVSSIRNVRRGSAPGTARLEYRRGHARSRFGVTRRVCESHRARGPGRHRADADRNRPRRVRVESGPVPGGGGEVVRQAGGRRAHHGRPKGRGAGESRTGRVLRDGGSTERRARRGAEAADDRAGRVRGGHGARDQGLHSGQEGRGRGGRRAGAPRVPPRGLEAPRRPEDRGPGRSPPDRAARRPLDGAEVHRRGRDRGRGPDRGREHSPVRAARGVRHLQLGGQPARVARLSPGRGRPTGVREHHDRQSGSAQSQRVAHAQVAADRGGNADLGRR
>NZ_CP053452.1|WP_171469499.1|832529_834710_-|tetratricopeptide-repeat-protein
MFRFALPVVLLGAPVALARPIASPYAALRAVAAVERGDQLLTESRFAEAIKEFDAAARLDPRNAKAFRFRAWAWLRMGDSSRAVADYDRAVHLDPNNMGLYASRADAWARLGEYDRALTGLDEAIRRAPDEASLFVARSRVWSARGDSARAVRDLTLASACAARTSEAFGCRAGAWMDLGRFDRALADLEDALRLDPRNAAALQCFGVLCLLRNESDLALTYLDRSVEADPTYTKALIARGGAWALKREWDRAIADLDRAVRMDPIAPSAFMNRGRVRAAKGEFTKALEDFDAAVRLAPRDAKVFFNRAVVRASTQPDRAIADYTEAIRLDSGYLAPLVNRADLWAAKQEWAKAVRDLDEVIRLRPDLTDLDRSHRPCGVAVFTEHVPTPAELYVQRGRCRVAGGIAGGASDFSEALRLDPTHVPALTARGEAFLAMGEPGAAMSDFDAALELAPDCAQARTGRAGARCMKGEWDGVIADCDAALRLDPKCATALVARSLAWLVKGEWDRTIADCDAALRLDPKRADAHANRSGAWGGKTEWDRAIADCDAALRLDPKCAAAFANRGFARMGRGEWDRAIADCDAALENNPALSSVVANRGAARLFRGEWERAAADLDAALAANPNDETGLPFRSLLRAACADPKYRDARQAYADAKRACDRTQWKKGFALAALAAAYAEAGQFDEAVALQKRALEDAAYAKVDYLEPRARLELYAAKKPYRLPGK
>NZ_CP053452.1|WP_171469500.1|834791_836282_-|protein-kinase
MSDAGDRLPVDPNTHKQSPTDVARRTPRSLFAPGDPLPNLEMWVLERRLGGGGFGEVWLARHERKGEAAVKFCTDPVARHQLVTHEKTVVARVMRHGGNHPNVVPLLECNLSGEIPWLMYEYVEGGTLAGAVAEWRAAAAAGSAAPVRTLHAITGALAKFHRLDPPLVHRDMKPENILMAGRVPRITDFGIGGAAEEAARVERALDGTGLEVRVPTMLQAAGSSRYAPHEQFLGSPANPRDDVYAIGVIAYQLVLGDLTAIPGPDTAAELRALRVPSELASLIVRSVALDPRHRPKDAAEWETKLEALVRKKTVAGRPSAPVPESTSRDEPTEELASISGSELPVPVPVSQALDLSARGRWYVRPAGRPEAEWQIVTTTPARLRLAPGEVYRFSINSAATADDVDAIRALAGLTSLRYLNLSYCAGVTDAALAHLKAFPGLRQLFLRGCPGVTDAGLVHLHELTALATLELIDCTRLTAAGLAALRAALPGCKVYG
>NZ_CP053452.1|WP_171469501.1|836608_837007_+|response-regulator
MTATDIVESPLGGLRVLVAEGEEDGAVALTAVLRYNGFDTREARTEEDMMRTARETGPAVLILDLDLPGGDNCDVIRRVLKLPNPPEVVVVTAHTAPALRTAALRAGAAAYLLKPADPIELVRLVTRLGAKL
>NZ_CP053452.1|WP_171469502.1|837110_837383_-|hypothetical-protein
MSVDSEPLAGQRYSLLWCSACARTIVCNRVEILGFIRSGWPRCCQSEMGLFIEAERPVPGDTRVVAEPLTLPGSNEGTAIIPVPAARTPR
>NZ_CP053452.1|WP_171469503.1|837847_838174_-|hypothetical-protein
MRTYLFAGVSGVALALTAGTPGAAGAQVYVYPSINTSPYVTPIGYAYPSYNYSYGYTYPGYSTYSYGWTNPYSTWAWSGYRTYPTYYGSYWGGPRSGYYGGYRGWRRR
>NZ_CP053452.1|WP_171469504.1|838436_839720_-|hypothetical-protein
MTALTFTLFLGAATAADPVPAPAESSKPVALTRDEEKALLEKHKAAKPRLPMPPADPSNPLARVNNGAFRAHYLPPDLRDSGFARDPDPAMTLDNTFKVKLFWITSRGNNCYYCLGHQEYKLLGAGVSDDDIAALDGDWRAAPAKERAAYAFTKALTHAPHRVTAADIAALKAHYTATQVAEILVTVAGYNSTNRWTDGLNIPGEGDGARFKKDGITADFSTFKTPTSDKYAEQRTAVAPVKLAARPPLEARDKVEALWKAPRTPALPLADAKAVGEVWGAGAAPNWAALLATFPKAMKGRVVGLKNATEKGNLDAKLKAQIAWVAARHDRAWYALAVARERLLRAGVSADDVWKLDGDRKHLTESEQAALALTEVLTVAPWQVTDEMVERCRKSFKDAEVAEIVYHACNAAFFDRVTEAAQLPLDK

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Crispr_ID: NZ_CP053452_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053452_3

1427540-1427652

Orphan

Consensus_repeat	Method
CAAGGCCGAGGCCGAGGCCAAGGCCGCACGCAAGGCGGAAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP053452_3

>merge|NZ_CP053452|3|1427540-1427652|CRISPRCasFinder
CAAGGCCGAGGCCGAGGCCAAGGCCGCACGCAAGGCGGAAGGGGAGGCGAGGACGGCGGAAGGGGACGCCCGGTCGGCGGAGACCAAGGCCGAGGCCGAAGCCAAGGCCGCAC

>NZ_CP053452|3|3|1427540-1427652|CRISPRCasFinder
CAAGGCCGAGGCCGAGGCCAAGGCCGCACGCAAGGCGGAAG	GGGAGGCGAGGACGGCGGAAGGGGACGCCCG
GTCGGCGGAGACCAAGGCCGAGGCCGAAGCCAAGGCCGCAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053452.1\|WP_171469898.1\|1423986_1424400_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171469896.1\|1422887_1423328_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171469893.1\|1419820_1419961_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171469910.1\|1437293_1437785_-\|dual-specificity-protein-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|350355
NZ_CP053452.1\|WP_171469903.1\|1428701_1430246_-\|IS66-family-transposase	unknown	unknown	gnl\|CDD\|376980
NZ_CP053452.1\|WP_171469900.1\|1425068_1425413_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171475963.1\|1419981_1420224_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171469905.1\|1430625_1430946_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171468900.1\|1432613_1432991_-\|IS66-family-insertion-sequence-element-accessory-protein-TnpB	unknown	unknown	gnl\|CDD\|377551
NZ_CP053452.1\|WP_171469897.1\|1423452_1423857_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171468866.1\|1432984_1433332_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171469904.1\|1430203_1430632_-\|IS66-family-insertion-sequence-element-accessory-protein-TnpB	unknown	unknown	gnl\|CDD\|377551
NZ_CP053452.1\|WP_171469894.1\|1420888_1421296_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171469909.1\|1435325_1437026_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171469907.1\|1433716_1434049_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171469908.1\|1434455_1434953_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171469901.1\|1425557_1426103_+\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|254323
NZ_CP053452.1\|WP_171469906.1\|1431968_1432235_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171469899.1\|1424503_1424974_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171469895.1\|1421406_1421658_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP053452.1\|WP_171469901.1\|1425557_1426103_+\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|254323	pfam07638, Sigma70_ECF, ECF sigma factor. These proteins are probably RNA polymerase sigma factors belonging to the extra-cytoplasmic function (ECF) subfamily and show sequence similarity to pfam04542 and pfam04545.	1.09089e-54
NZ_CP053452.1\|WP_171469904.1\|1430203_1430632_-\|IS66-family-insertion-sequence-element-accessory-protein-TnpB	gnl\|CDD\|377551	pfam05717, TnpB_IS66, IS66 Orf2 like protein. This protein is found in insertion sequences related to IS66. The function of these proteins is uncertain, but they are probably essential for transposition.	2.26495e-38
NZ_CP053452.1\|WP_171469903.1\|1428701_1430246_-\|IS66-family-transposase	gnl\|CDD\|376980	pfam03050, DDE_Tnp_IS66, Transposase IS66 family. Transposase proteins are necessary for efficient DNA transposition. This family includes IS66 from Agrobacterium tumefaciens.	2.49193e-90
NZ_CP053452.1\|WP_171468900.1\|1432613_1432991_-\|IS66-family-insertion-sequence-element-accessory-protein-TnpB	gnl\|CDD\|377551	pfam05717, TnpB_IS66, IS66 Orf2 like protein. This protein is found in insertion sequences related to IS66. The function of these proteins is uncertain, but they are probably essential for transposition.	2.4029e-39
NZ_CP053452.1\|WP_171469910.1\|1437293_1437785_-\|dual-specificity-protein-phosphatase-family-protein	gnl\|CDD\|350355	cd14505, CDKN3-like, cyclin-dependent kinase inhibitor 3 and similar proteins. This family is composed of eukaryotic cyclin-dependent kinase inhibitor 3 (CDKN3) and related archaeal and bacterial proteins. CDKN3 is also known as kinase-associated phosphatase (KAP), CDK2-associated dual-specificity phosphatase, cyclin-dependent kinase interactor 1 (CDI1), or cyclin-dependent kinase-interacting protein 2 (CIP2). It has been characterized as dual-specificity phosphatase, which function as a protein-serine/threonine phosphatase (EC 3.1.3.16) and protein-tyrosine-phosphatase (EC 3.1.3.48). It dephosphorylates CDK2 at a threonine residue in a cyclin-dependent manner, resulting in the inhibition of G1/S cell cycle progression. It also interacts with CDK1 and controls progression through mitosis by dephosphorylating CDC2. CDKN3 may also function as a tumor suppressor; its loss of function was found in a variety of cancers including glioblastoma and hepatocellular carcinoma. However, it has also been found over-expressed in many cancers such as breast, cervical, lung and prostate cancers, and may also have an oncogenic function.	2.78576e-26

>NZ_CP053452.1|WP_171469901.1|1425557_1426103_+|sigma-70-family-RNA-polymerase-sigma-factor
MSDVTRLLAAAAAGDHWAAADLLPLVYNELRKLAAARMAAENPGHTLDGTALVHEAYLRLVGDQHFDGRGHFFAAAAEAMRRILVNHASDRKRLKRGGGRTRVELLDQPASLAEDPDLVLSLDDLLTRLDADDPAAARLAHLHLFSGLSVEEAGDALGMSRAVAYRNWKYARAWLRDALGK
>NZ_CP053452.1|WP_171469900.1|1425068_1425413_-|hypothetical-protein
MSKAKPVPEVVRRRAVGAVATAWEAGCPVADWRPQGQAAIAETCLRRYGSLARRGVAAGDRTGAIRDLARGLIEASGRERNRVGPLIRDYEWLAEQVLSAITDTAQGAEPDPPA
>NZ_CP053452.1|WP_171469899.1|1424503_1424974_-|hypothetical-protein
MSQWASMTVLPAEDFARLQADRDAPVSGDRERFDLHPLWYNFHELYRDEPGPLRFIVQGDVAERPIEWCLGVLPDQPEDEGDGTYYALVSPPTVAAIVAAIRAFPPGEVIGRLRKSRPGWVQYKKGRDDFSTAFEGIARAYAVAAAQRAGLTILVC
>NZ_CP053452.1|WP_171469898.1|1423986_1424400_-|hypothetical-protein
MGEWLRWAFGWACGALAVLKFAAGLWCWVELRRKWLELPELWGVDWLDIVFRVERAFGMPLTAADFAGWTTGARVGLTAGQLWELVADKLRGAGAEVPADGWERVVAVLSEALNVRAERIATESRLCADLDMGSGPE
>NZ_CP053452.1|WP_171469897.1|1423452_1423857_-|hypothetical-protein
MRPATDHLYHPDGYHHDLTEAVRRIAPAFRRVVIDRDRGDTWVRGGYDELGRLNAPRVIRESHLSMLGRTAHIIVADEAGCAEFYLVGGEDIEVEYASDAHRAECRGVVRVLAEVLGYERMDKVEPPAFGRPQG
>NZ_CP053452.1|WP_171469896.1|1422887_1423328_-|hypothetical-protein
MRLEPLTSFTWATHGVPLAALAVRVEALAAGLDLPLRMWDEPGLGPARGFGCRMPSGRACLLEELELAIRYQGARGPTVYVEAADLGALGVAPMVAEVLGALGLSRSDLAGVAGTDAQQGAAELVSRMSRRSGGAAEPDAAPDPAT
>NZ_CP053452.1|WP_171469895.1|1421406_1421658_-|hypothetical-protein
MDHREPDPAGAVFDLDLFLAGWDEWFPAAEGLRTVDGLLAALSVDRGGAGGESADLVSELAGLREWLTKALACGSRFRIEAAI
>NZ_CP053452.1|WP_171469894.1|1420888_1421296_-|hypothetical-protein
MTSWGAFVRSERPLVGCFCPVALLHELREAFGPALECDGTDRLAGHGERTARTAAGLGIRPDSPVVLCAARNEVQFGPRYEFRLRVGPSAFVSGTLDRYSIRVACEREADFPEPVRGQFLAFLASLQLGGVRVDG
>NZ_CP053452.1|WP_171475963.1|1419981_1420224_-|hypothetical-protein
MRDVFGNPFRPVVFSPSWRTGTATALARQMYETRDFSAMPILADALQDAGCDDTDALDHCRGSGPHVRGCWVVDLVLGKE
>NZ_CP053452.1|WP_171469893.1|1419820_1419961_-|hypothetical-protein
MRSGPRRGRVRRVIAIVYHLVGKWGTVFTLMGVYCLREKPRGDEDG
>NZ_CP053452.1|WP_171469903.1|1428701_1430246_-|IS66-family-transposase
MPPTDDIDVLRQKLTHVEAVIAELRGVVAGLRKQVEAQQAHFHRLVKRTFGRGGERVEGPTLFDGIDPPEAEVPPPVAPPVPEPPAPRKRKGHGRRRKPADLPRRREEIDLSAAEKLCACCGTAKIRIGQVVSERLDYQPMSLFVRELVRPTYACRSCESQGHDPQIARATLPPEPIPKSGIGSGLLAHVIVSKMVDHLPLHRQESILARHGWDVCRSTLCDHLRKCGELLTPLYDLMHRRLLRSFAIHADDTPLVQLRPRRTAFAWVYLGDAANPYTVFDLTAGRRQEFPQAFLGGYRGFVHADAYDGYNGGHNNIRHLGCWMHARRYFVEAEPSDPRAVEALAFVRTLYAVERAIHDERDRPGRTFTDADVVRVRRTRAGPILTAFAGWLDVQHRSATPKSLFGQAVGYARNQWASLVRYLDDARFAIDNGAAERAIRPLATGRANWLHVGGDGGLKTASVLLSVCATATRHRLNPWEYLREVLDRIAHRPAGADVGDLLPDARVKPHGQTR
>NZ_CP053452.1|WP_171469904.1|1430203_1430632_-|IS66-family-insertion-sequence-element-accessory-protein-TnpB
MLTLLPGGRILVAVEPADGRRGIDSLAGVVRSALNGDPLSGDLFVFRTRRADKLKILAWMGDGFALSLRRLEKGTFAFPAATDASVPVTPTQLAMILGGLDPAKARERRRYKLRRDSRYPDHPAVLNPACRRPMTSTCFARS
>NZ_CP053452.1|WP_171469905.1|1430625_1430946_-|hypothetical-protein
MSAHRPKKVRFWRGTIDAWKQSGQTVNAFCRARQLTRSNFDRWRRILAAEAGISSPPSASAFVPVRVVAEPMAEIVLRSGVVVRLPLGAVPDAVTRLVTAVGAATC
>NZ_CP053452.1|WP_171469906.1|1431968_1432235_-|hypothetical-protein
MCIGQTQTEQLDCDPTPYFVRRTIRKTYACQQCPRRSGPRTGSDRHAEYRRTDRQGTVWSGLVGRGSRREVPRPPAAAPPSRPDRARG
>NZ_CP053452.1|WP_171468900.1|1432613_1432991_-|IS66-family-insertion-sequence-element-accessory-protein-TnpB
MLSIPPTTQLWYGGAVDLRLGFDGLYRHVQSTLQADPLSGHLFIFTNRSANRLKALYWTRHGLCLWCQRLERGRYHFPTPTDRKLELTATEFAMILDGIDYSSAKRFTRYCRPKASESDLRTRTS
>NZ_CP053452.1|WP_171468866.1|1432984_1433332_-|hypothetical-protein
MPAVPAASRRDPAATRRRWAERLERFRRSGQTIAQFCAAEGVSPPSFYVWRRTLADHAPSPVPVTPTLVPIRLTPSPAGPPIEVVFPSGTVLRFPVDARPEVIAALVHAVEGRPC
>NZ_CP053452.1|WP_171469907.1|1433716_1434049_-|hypothetical-protein
MIIFGTRQEELDLGPVHPQDCEVCNKADQPFRLRLVYRYDHVWFVLGHVRALSYVIVCGDCGTPFRIPRAAGRKLGRLAREPIPLLRRYGCLLVFSAFVLIAGLAAVLGY
>NZ_CP053452.1|WP_171469908.1|1434455_1434953_-|hypothetical-protein
MAEPTQINLSRALKLKNRVVHRLSQFDTQIATYNSVIEDNQEYDVRQLYKARMVLAEQLVKLKVAINAANQPIQGLIFELAECKALVAMLGKVNTRHGPSVEGFSGARTNYVAQFRKPDIDTEVRRVEKEIDRLQDELDRFNHRTLIAVDASLLAEPDPPPDATR
>NZ_CP053452.1|WP_171469909.1|1435325_1437026_-|hypothetical-protein
MSNILGAVLLLASLGADYRHDLKQLDQLLAWHEHYGLPLPPQNAELVQVVTIPVPVEAFSPEKAPARILAFRVDGNLSFANSEHWKGQIASVKGVAPAASLVHGKVFAEWLDVALVARERGWEPLALAAFRRWKTDNEWPRTEKEFATRALWHWKRSLHATPDVPLTVVAKYLRRVLRTLSEDEFDPDLLRSVELALQPRNAPPGSDEALVDDLVNVRDWPNEERGGYGFQKDPRYRAVVRRGLAVVPELVAHLDDDRITRAGDICNNTHRVKFIAKDILEQLNGGTFFPGDDDERTAIAKWFADANKLGEEKYLMERLFSEDVYFPDTVLWLLAEKYPQRLSEVAHKFFDKVAARGFYAWNSDNAWYFSKAVAGARISDADKRTILEYAARHTDPVSRTAGIYYLRPFSPKLAKNRLLRSLSELETEPMVPQRGFRNAVPQYSLAKIVAEGTDPEEWKALALAVRRANVADRIEFLGAIASATTPHARKHRLAFLADYLTDDDALVDSQAFGANFPRLEVRNAVAVRLADLFQFDTEEQKHAWDEAEWRELRTKVRTKVQEEMRR
>NZ_CP053452.1|WP_171469910.1|1437293_1437785_-|dual-specificity-protein-phosphatase-family-protein
MPRPRAGDWLGDEAASWRKQTLNIVVSLLDDDEVAELGLGAEPECCSRAGLTFARFPVPDRGVPASPAAVSELVTVLVAELRAGRGVGIHCRIGVGRSAALAVCVLAALGVPVESAWVAVQRARGQSVPDTPAQRAWVTDWFAHTLPSKQRPAEPAAAPDPAT

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Crispr_ID: NZ_CP053452_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053452_4

1460920-1461020

Orphan

Consensus_repeat	Method
CCGCACCCGGCCCCGCCGTCACC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP053452_4

>merge|NZ_CP053452|4|1460920-1461020|CRISPRCasFinder
CCACACCCGCCCCCGCCGCACCCACCGCCACCGCACCCGGCCCCGCCGTCACCACCGCTACCCGCGGTACAGCCGGTGCCGCACCCGCCCCCGCCGTCACC

>NZ_CP053452|4|4|1460920-1461020|CRISPRCasFinder
CCACACCCGCCCCCGCCGCACCC	ACCGCCACCGCACCCGGCCCCGCCGTCACCACCGCTACCCGCGGTACAGCCGGTG
CCGCACCCGCCCCCGCCGTCACC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053452.1\|WP_171469941.1\|1467738_1468956_-\|HEAT-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|293787
NZ_CP053452.1\|WP_171469931.1\|1453293_1454274_-\|DUF1559-domain-containing-protein	unknown	unknown	gnl\|CDD\|284919
NZ_CP053452.1\|WP_171469928.1\|1451949_1452093_+\|DUF2695-domain-containing-protein	unknown	unknown	gnl\|CDD\|378505
NZ_CP053452.1\|WP_171469939.1\|1465480_1466194_-\|response-regulator	unknown	unknown	gnl\|CDD\|225114
NZ_CP053452.1\|WP_171469934.1\|1458038_1459379_+\|DUF1552-domain-containing-protein	unknown	unknown	gnl\|CDD\|377875
NZ_CP053452.1\|WP_171469926.1\|1451409_1451577_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171469935.1\|1459477_1460833_-\|C4-dicarboxylate-transporter-DcuC	unknown	unknown	gnl\|CDD\|225611
NZ_CP053452.1\|WP_171469932.1\|1454962_1457335_+\|DUF1592-domain-containing-protein	unknown	unknown	gnl\|CDD\|377886
NZ_CP053452.1\|WP_171469945.1\|1472975_1474160_-\|thioredoxin-family-protein	unknown	unknown	gnl\|CDD\|379034
NZ_CP053452.1\|WP_171469929.1\|1452264_1452579_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171469942.1\|1469391_1470789_-\|IS66-family-transposase	unknown	unknown	gnl\|CDD\|376980
NZ_CP053452.1\|WP_171469940.1\|1466200_1467436_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237526
NZ_CP053452.1\|WP_171469944.1\|1471772_1472870_+\|tagatose-1,6-diphosphate-aldolase	unknown	unknown	gnl\|CDD\|237236
NZ_CP053452.1\|WP_171475966.1\|1474267_1475167_-\|tyrosine-recombinase-XerC	unknown	unknown	gnl\|CDD\|234698
NZ_CP053452.1\|WP_171469937.1\|1462445_1464659_-\|protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP053452.1\|WP_171469927.1\|1451776_1451953_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171469930.1\|1452819_1453266_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171469933.1\|1457514_1457880_+\|GxxExxY-protein	unknown	unknown	gnl\|CDD\|275083
NZ_CP053452.1\|WP_171469943.1\|1470903_1471731_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171469938.1\|1464655_1465228_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274375

Protein	Function_ID	Function_description	E-value
NZ_CP053452.1\|WP_171469945.1\|1472975_1474160_-\|thioredoxin-family-protein	gnl\|CDD\|379034	pfam13098, Thioredoxin_2, Thioredoxin-like domain.	2.91448e-13
NZ_CP053452.1\|WP_171469931.1\|1453293_1454274_-\|DUF1559-domain-containing-protein	gnl\|CDD\|284919	pfam07596, SBP_bac_10, Protein of unknown function (DUF1559). A large family of paralogous proteins apparently unique to planctomycetes.	2.16607e-33
NZ_CP053452.1\|WP_171469928.1\|1451949_1452093_+\|DUF2695-domain-containing-protein	gnl\|CDD\|378505	pfam10905, DUF2695, Protein of unknown function (DUF2695). This bacterial family of proteins has no known function.	0.00319376
NZ_CP053452.1\|WP_171469934.1\|1458038_1459379_+\|DUF1552-domain-containing-protein	gnl\|CDD\|377875	pfam07586, HXXSHH, Protein of unknown function (DUF1552). A family of proteins identified in Rhodopirellula baltica.	2.80348e-132
NZ_CP053452.1\|WP_171469941.1\|1467738_1468956_-\|HEAT-repeat-domain-containing-protein	gnl\|CDD\|293787	sd00044, HEAT, HEAT repeats. The canonical HEAT repeat consists of two helices forming a helical hairpin. HEAT repeats are found in a diverse family of proteins, including the four proteins from which its name is based: Huntingtin, Elongation factor 3, the PR65/A subunit of protein phosphatase 2A (PP2A), and the lipid kinase TOR (target of rapamycin). The HEAT repeat family is related to armadillo (ARM)/beta-catenin-like repeats.	4.40001e-10
NZ_CP053452.1\|WP_171469944.1\|1471772_1472870_+\|tagatose-1,6-diphosphate-aldolase	gnl\|CDD\|237236	PRK12858, PRK12858, tagatose 1,6-diphosphate aldolase; Reviewed.	9.63544e-75
NZ_CP053452.1\|WP_171469932.1\|1454962_1457335_+\|DUF1592-domain-containing-protein	gnl\|CDD\|377886	pfam07631, PSD4, Protein of unknown function (DUF1592). A region of similarity shared by several Rhodopirellula baltica cytochrome-like proteins that are predicted to be secreted. These proteins also match pfam07627, pfam07626, and pfam07624.	8.04293e-68
NZ_CP053452.1\|WP_171469942.1\|1469391_1470789_-\|IS66-family-transposase	gnl\|CDD\|376980	pfam03050, DDE_Tnp_IS66, Transposase IS66 family. Transposase proteins are necessary for efficient DNA transposition. This family includes IS66 from Agrobacterium tumefaciens.	2.0232e-37
NZ_CP053452.1\|WP_171469940.1\|1466200_1467436_-\|hypothetical-protein	gnl\|CDD\|237526	PRK13837, PRK13837, two-component system VirA-like sensor kinase.	1.39635e-28
NZ_CP053452.1\|WP_171469939.1\|1465480_1466194_-\|response-regulator	gnl\|CDD\|225114	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms].	1.36863e-22
NZ_CP053452.1\|WP_171475966.1\|1474267_1475167_-\|tyrosine-recombinase-XerC	gnl\|CDD\|234698	PRK00236, xerC, site-specific tyrosine recombinase XerC; Reviewed.	1.95887e-125
NZ_CP053452.1\|WP_171469937.1\|1462445_1464659_-\|protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	4.15459e-82
NZ_CP053452.1\|WP_171469935.1\|1459477_1460833_-\|C4-dicarboxylate-transporter-DcuC	gnl\|CDD\|225611	COG3069, DcuC, C4-dicarboxylate transporter [Energy production and conversion].	1.82944e-23
NZ_CP053452.1\|WP_171469938.1\|1464655_1465228_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|274375	TIGR02984, Sig-70_plancto1, RNA polymerase sigma-70 factor, Planctomycetaceae-specific subfamily 1. This group of sigma factors are members of the sigma-70 family (TIGR02937) and are apparently found only in the Planctomycetaceae family including the genuses Gemmata and Pirellula (in which seven sequences are found).	1.25888e-49
NZ_CP053452.1\|WP_171469933.1\|1457514_1457880_+\|GxxExxY-protein	gnl\|CDD\|275083	TIGR04256, conserved_hypothetical_protein, GxxExxY protein. Members of this protein family average about 130 residues in length and include an almost perfectly conserved motif GxxExxY. Members occur in a wide range of prokaryotes, including Proteobacteria, Perrucomicrobia, Cyanobacteria, Bacteriodetes, Archaea, etc.	2.26554e-55

>NZ_CP053452.1|WP_171469935.1|1459477_1460833_-|C4-dicarboxylate-transporter-DcuC
MTFAMLPVLVLIALAVYAVVRGADVRLVLLAAALAIAGLSGDVTPVIREFLGTFSNEKFVVPICTAMGFAYVLKHTGCERHLVRLLVRPIAHARGLLVPGVVVVGFLVNVPVISQTSTAVCIGPVVIPLMRAAGYSMLTIGACLLLGTSVGGELLNPGAPELLTVFDKTGVTSTEQARRYLPAPVFTLLAVSGAVIWLLSLWWERSKRPEPSSDPGAAQVESQLERINLLKAAVPLVPLGLLFASGLPAPFNGVDVPDAWVVLPKSGHRDPLYGSRLIGLAMLVGVGAAMVAAPRRARDCVKHFFDGAGYGFANIISLIVAANCFGAAVRESGLAAELGRVIESNPRLMDPLAAFVPLAFAALGGSGMASTQSLYGFFYGPAVALGLDPTSVGALVAVGSAAGRTMSPVAAVVLMCASLTGSRPLDLVKRVAAPLLIGIVVVLALRGAGVL
>NZ_CP053452.1|WP_171469934.1|1458038_1459379_+|DUF1552-domain-containing-protein
MKSISRRAALKGLGTAVALPFLESLAGAAPAASAVAAPKRLAFIYVPNGVNMPEWTPRAEGPLKELTGTLAPLNPFKDHVNVLSGLACDKARANGDGPGDHARAMSAFLTGRQARKTHGADIRAGVSADQHVANAIGDRTRFPSLELGIERGGSTGNCDSGYSCAYSHNLSWRGESTPNSKEVDPKAVFERLFSGTDPKELAEARAKRELYNKSVLDFVMEDAKGLNSTLGSGDQKKLDEYLTSVREVEQQIQKARAANTAPVPKPDMKAPTGIPKDVQDHIRLMCDLMVLAYQTDLTRVVTLPFANEGSNRPYKHIEVPEGHHDLSHHGNDAKKLEKIAKINKFHTEQLAYLLGKMKAVKEPNGTSLLDSVMLVYGSGNGDGNRHNHDELPVLLVGKGGGTIESGRHISFPKHADTPITNLFLALFERMGTPTRTFGDSTGVLKI
>NZ_CP053452.1|WP_171469933.1|1457514_1457880_+|GxxExxY-protein
MARSPELSSGPAIEVHRIMGPGLLESVYQRCPCHELNLRSIPFEPQVPLPLLYKGREHGNELIPDVLVDGRLILELKAVDELAPVHEAQLLTYLRLSGIKLGLLINFNVRFLKDGIRRRIL
>NZ_CP053452.1|WP_171469932.1|1454962_1457335_+|DUF1592-domain-containing-protein
MGLRTALVLFGTAVAGSGAGAWLIPTLARPSTVAAKPAEAPTGPAAPPEDATFTTKVLPLINKYCLECHNGEKAKGGLTLEGYVSEAHARKDRKNWLAIQHVIASGEMPPKKKPQPTKDEKEFLLDWIANSLTKVDCTTPKDPGRVTLRRLNRAEYNNTIRDLCGVDSKPADEFPADDVGYGFDNIGDVLSFQPVLLEKYLAAADKVLATALHVPEPVKSSKQGFGSQNILVLPRSAKTPDPGNKIVFKSDGSAFLEKFNFPAEGEYIIRFRAWGTKAGDEFPKATVRVSGDDVESFAVEAEQGKAKVYEARTRIKRGERRVAVAFVNAFEDKPNKKFRELGLERIEIEGPFGPVPPPEPASVKVLLVARPGSGTDARSAAEAVLTAFARRAYRRPVTPDEVARLMKLYDTATKQGEAFPAALKLPMKAALVSPHFLYRIEEDPKNPNDVRTLNDFEFATRLSYFLWSSMPDEELFALAARGELRKPGTLEAQVKRMLKDPKAKALSENFAGQWLELRKLNALAPDKGYFPGWDDALRNAMVREAEAFFEYVVQNDRSVLEFLDADYTFVNDRLAKHYGIPNVTGAQFRQVKLPDGRRGGVITMASTLTVTSNPTRTSPVKRGKWILENVLGTPPPPPAPDVPELPPTGQLKGTLRQQMEQHRADPACAVCHSKLDPLGFGLENFDGIGGWRTQDNKKDIDPSGELPGGVKFSGPAELRKVLLGKSDQFRSCFAEKLLTFGLGRGLEYYDKCALDDIVKAAKANDDKFSALVLAVVKSDPFQKRKGKRSE
>NZ_CP053452.1|WP_171469931.1|1453293_1454274_-|DUF1559-domain-containing-protein
MRPHLSPGARPRRGPATGFTLIELLVVIAIIAILIGLLLPAVQKVREAAARMQCSNNLKQLGIATHAYHDVNGAFPFEDGPMSLPANGLVPPSIFVQVLPFIEQGNLYQQMSAQPGGLNNFIGNQTLANTVAIKTFLCPSRRSAPGGLGKVDYAGTYNGGIDELDITNYQPSATGDRSILNTAGTSMTAVTNGAGTSNTLLLAHKILQPVNYSGAPSTLANPCGPGTSCKDLGWAVTLKGQTGYDHMRWCDTYAGGSNAHRGYFKDDNNVDENHLGGPHTSGSPVLWADGGVRMYSYGYVDSSGYSDDAVWQSFWSYNRSWQNTPP
>NZ_CP053452.1|WP_171469930.1|1452819_1453266_+|hypothetical-protein
MERWSPLTLALAPVLDRIAPEPMTDETRDRLEVIVGDHGLSGPSPPAWMVELFGDIRAGHTARPRRWVPGGYPLGEMGLANVLADVEAELFPLGVDDYGEDVTWPVPGCGVRVVVTRESAAPGPWVYLERLPGRGEPADPHAAPAPPA
>NZ_CP053452.1|WP_171469929.1|1452264_1452579_+|hypothetical-protein
MYCPHCGRTLVESGGKFFCYPGQACFAGGVAAALRERFPAPRPAAPEFEVGCRPDEWWCPGCGVPLGEGSACSVCGGTIADLRVRLVELAPHRDENGSWAWGHS
>NZ_CP053452.1|WP_171469928.1|1451949_1452093_+|DUF2695-domain-containing-protein
MRAWCAASGLEFAPVEAWLLDTGGGCDCEALAGAEPAFREACGEPGG
>NZ_CP053452.1|WP_171469927.1|1451776_1451953_+|hypothetical-protein
MANRSGRQNRKAALAVWKAEQRAAARAKFPLPAAARSALFDDSTRGCPAAAATTRSGW
>NZ_CP053452.1|WP_171469926.1|1451409_1451577_-|hypothetical-protein
MNFSASVAGLSRPFGPRGRENLERIIGRERRETAAGGGAEAAGTTAEAPGSCPSP
>NZ_CP053452.1|WP_171469937.1|1462445_1464659_-|protein-kinase
MSAHGQTRVDELAAEFLAAVERGDPPHPAEWLARHPAHAAELAAFLADLGRFGPFLGLPALPPDLDRTAGYSSDESARGSEPPADRFGEYELVGVIGEGAMGVVHRAILVGTSLTVALKRLKVAFGDADASLFLEEVTAQSGLRHPNIVPVYHVGERDGRPYFTMPLVTGGGLDRQVGRFRDDVRGAAELIVKVARAVHHAHQRQVIHRDLKPANILLDETGEPFVADFGLAARLGATGAADAGPAGSLPWMAPEAVRGGPVTTGVDVWALGAILYELITGVRPFRGATRAELRAAILDHDPPPPRGLNRRVPPDLDAVCRRCLEKKPERRYESASAVALELERWLQDRPVRARTPTRREQVARWCRHNPAATWGGLLLVALLVGGVGLGVELAGEQAAALRSAVCRSNEHTAWHVAGSVLRKLDDLAAPVSRAADDERLRAACRAGKREAVEHELGLLFTRGAPPFETVYVLDPAGTIVALIETGGAGPPGTGVVGRSFPDRDYFTGARKHARESGRERVHVSRVFRSVHDQKDKFAISCPLRPGAPSEEPWVLAATITTDDTLGLIKLQDGDLKTALLVPRDPSSSRVPGEPDGPAGYLILVHDAFGGKKGTPCAPFPVDQPGPVPVPNGRPELSYPVEPGAPPFPQNSNYHDPVADHGHPRYAGRWLTGAARVGNTEMVVIVQQREDVALAPQRAFFERFAAWAGGVAVVGLLVFAALAGARARRTRGALREEK
>NZ_CP053452.1|WP_171469938.1|1464655_1465228_-|sigma-70-family-RNA-polymerase-sigma-factor
MGADPEPDLIGPHRGYLTAVARFQLAARPWLAARLDASDLAQQVMLKAHAARGEFRGRTAAEAVAWLRQILARTLANELRAHAQAKRDVGAERSLEADLGASSCRLDAWLAADQTSPSERAVMHERAAALAAAVEQLPPDQRDIVLWKHCEGLSLAAIVARTGRTPAAVAGALRRGLERLRELMSESDPS
>NZ_CP053452.1|WP_171469939.1|1465480_1466194_-|response-regulator
MPYDVEDRLTQTPKPLFPPQTPAPKAQGGARELQSSGDIRILILDDDPHTCAVIQAALSNRDFVIEVVSDPMLVESALAGPHSYHLIVLDYVLPGLEAEQVFGWIRDRQPDANIVVVTGYPSVDSAINCLRAKTCDYLTKPFQVDQLREIVFRCLESKGLLRMTEDALKEALGTAIRERRKALNLTLANMSDRTGVSLGYLSQIELGKNSASIETLYRICLALGMKMSELFHAVQRN
>NZ_CP053452.1|WP_171469940.1|1466200_1467436_-|hypothetical-protein
MSSPGTLSAALAFLPNWWQETTDLAAFDELLAGWGRACGWRACGFVWTGENGTVVKTVQGGSHVDAPAPLEVPDALRRLKSGEATTLYSIPNTAGRVFAAVHPSGRPVGVLWAEKPAGQPWVDAERAYLALTAKTIERAPAVAAVVGPVIDPDRLYQRLGDTAVIAGRMAHDFDNLLQGIIGFSDLTLPLVAPGSQAASFVAEIGKVGQRGITFTQQLHHLSRSGQVKPNPASVPLAVTKEEARLKATAPPGVRVEKEFAPGLPSVAVEAGPLQIVLGHLLENAVEACPQGGVVRVAARPVELSDADARAYLGRVGVGGHLQITVSDTGPGIKPEVRRRLFVEPFYTTKVRHRGLGLATAYRVLCAHRGGIQIEPVPPPGTGTQVRVVLPLAAARPPAVANGSVAATAVGG
>NZ_CP053452.1|WP_171469941.1|1467738_1468956_-|HEAT-repeat-domain-containing-protein
MLSAAPRFVGAFVLLALAVGFAPGQEADPVYEGRKVSKWIDIVQNDGSARQRALAVDALGKIWILHKHKDAIPNVCRALRVDASTAVRAQAAIVLAGLQDKELGSKALIDALGTEKESRVRKEIIAAMAKFPEVCALGIDPLITSLKDPDPAVKVAAAEALALAGSQVKTMAKSAAPGLVPLLKDTNKSVRIAAVYALGRIQPEGASTIAESMAAMLASEKDADIKRELIGALGLLGEKSEVVVEAIGTALFDANDEVRRTAARTLGTFGAEGAILADDLLKVIAADKLKDVRVDAVRAFGSTLGPARVKARLKDLRPQLDPAKQPDYEVRLALVEEIGALGWEHLGMDLASLDPAIKAEAQHTLGTLRLRLADPQVKVREAAGIAVRKIEKKPEPKKESEKKDQ
>NZ_CP053452.1|WP_171469942.1|1469391_1470789_-|IS66-family-transposase
MDEPSCPGCRELSKQVAELTAQVAELTRKLDEAVRAGKRQAAPFRKGPPKPDPKTPGRKPGDAHGKHGHRPPPPPEQVAECHEAHLPDACPHCRGRLVETGTADQYQTDIPRTPLIRKFRVHIGHCEACGKRTQGRHPLQTSDTLGAAASQIGPNAQAAAAILHTQMGLSHGKVAAVFDALFGITLTRGASAQIDLRAAVRLEPDYTQILDEVRSSEQIAGDETGWRIGGHPAWLHAWVGDRATAYAIDSKRSADVLERVIGRDWSGVLSHDGFASYERFEGAIHQQCVAHVLRRARELLERATRGAVRFPRQVIALFTEAVHWRNGYVPGTWSDNQLDAHRVSFDDRLLELVRRPRAVPEYATLARHLRNHFEQWFAFVFDPRIEPTNWKAEQAIRPAVVNRKVWGGNRTEVGAKAQGVLMSVFETCRRQALSVVDHVSQSLRWFGNRLLPRPTLLPARQPSPN
>NZ_CP053452.1|WP_171469943.1|1470903_1471731_+|hypothetical-protein
MSHELVGLIGLDREEVTELKARVECRLVSFDMMPKVQLRDQHLYLARFGTWDWVGPVTKVVFHGIFEDDLPGIAALALWGGQCLPSASGLLDCRPRIANMARVRRVSRFATLPRSYTDAETTFRTDTPSVAKWGEWHCGVGKERFTGEWTAQEPSLIEPFIEGEAVRVTAIGDTLFQLRLGGDDWKKSIHHAGADFVPLNSDLAADMRHLRDHFDLAVCAADYIIAADGNPHLLELNHVPNVTQFPAIRSAYLDLAAQWIAEPPAVSPVLPIGHF
>NZ_CP053452.1|WP_171469944.1|1471772_1472870_+|tagatose-1,6-diphosphate-aldolase
MATTSITRLYGLGLTPGKLRGLQRISNPNGTLSMVATDQNSSMIKMMKKALKDATGEDREPTYAEIADAKVMLSRALSPHCSGLLVDGYYGYASTIAAYAVPPGTGLLIRVEKSGADKNAAGAPCGEVEPGWGVHKIKRCGADAVKLLAQFEPGEFDSAEKNFEFTRQMYEQCIEHDILFLLEPIHFPYNGEKEGAASQVARKASTVIESAKYLSRYCDIYKSEFPGTLGVETDAQLVDNLKRLNDACVKPWVLLSAGVDYDKYKKQVEMAMKAGASGILGGRAFWKEFFTYNSPADRQKFAETECVKRVKETDAIVRTGTPWFAKYGLTMEDLHGIRTTEGWHARYGGGTAVKGSGPVDPNAVY
>NZ_CP053452.1|WP_171469945.1|1472975_1474160_-|thioredoxin-family-protein
MRRLSARSFALFPLVTVSALGLVQPALAQPARPVPAPAAPLVWRTDYNSARKEAQEKGLPLMVVVGTTDCFYCRKLEAGPFKDPAVTDLLAGGFVPLKLDASRAPDLAKALKVQLYPTMVLAAPDGKIHAFIEGYVEADRLAEQLKRTATAVATADWAARDFNEASKALGASDYPRAVTLLKGITRDAGEKPVGVKAKQILEEVEKLAAGNLAQAKLLEQRGRTQDAMDALAGTVKQFAGTRAASDAATQLAGLAEKPEEVEQRRRRLARDLLAVARDDFRSDRLYDCIQKCEQLASAFAELPEARDANALLADIKNNPERLAKACDQMNDRTAAMYMALAESWSKKGQSAEAAGCLKKVMALCPNTRHADLAQAELNRLQSRTAPAVPAGLRP
>NZ_CP053452.1|WP_171475966.1|1474267_1475167_-|tyrosine-recombinase-XerC
MEQGLAEFLTHLGLEKNASEKTVKSYREDLTQALVFARDRLKKSHVDPADWTTRLLRAFVAWLHEQKYAKTTIARRLAAVRSFGKFLCRGGVLAANPAQGLRGPRQDKRLPHFLTLADVHKLLAAPPGADWAGRRDRAMLETLYSAGIRVSELVGLDLLSVDLNDGVITVRGKGKKERLALLGPDAVRAIRVWLDDRAVLLKAAGKDTPAVFLNNKGGRLTTRSVGRLLAKHLKAAGLDPRTSPHTLRHSFATHMLDAGADIRGVQELLGHKSLATTQVYTHVSTQRLQKSYQKAHPRS

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Crispr_ID: NZ_CP053452_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053452_5

1575127-1575226

Orphan

Consensus_repeat	Method
GCGAGCGGCGCGGCGTGAGCCCGCCGGTGCTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP053452_5

>merge|NZ_CP053452|5|1575127-1575226|CRISPRCasFinder
GCGAGCGGCGCGGCGTGAGCCCGCCGGTGCTAGGAGAACCCGATGACCGACACCGGTCTCTTTCTGTCGCGAGCGGCGCGGCGTGAGTCCGCCGGTGCTA

>NZ_CP053452|5|5|1575127-1575226|CRISPRCasFinder
GCGAGCGGCGCGGCGTGAGCCCGCCGGTGCTA	GGAGAACCCGATGACCGACACCGGTCTCTTTCTGTC
GCGAGCGGCGCGGCGTGAGTCCGCCGGTGCTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053452.1\|WP_171470016.1\|1586517_1586817_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171470001.1\|1562558_1563284_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213222
NZ_CP053452.1\|WP_171470004.1\|1566762_1567410_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171470008.1\|1570428_1571307_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP053452.1\|WP_171470013.1\|1583002_1584535_-\|xylulose-kinase	unknown	unknown	gnl\|CDD\|212658
NZ_CP053452.1\|WP_171470011.1\|1576787_1578260_+\|PQQ-binding-like-beta-propeller-repeat-protein	unknown	unknown	gnl\|CDD\|224437
NZ_CP053452.1\|WP_171470012.1\|1578617_1581929_+\|efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223911
NZ_CP053452.1\|WP_171470015.1\|1585962_1586337_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|381146
NZ_CP053452.1\|WP_171470019.1\|1589696_1590479_-\|indole-3-glycerol-phosphate-synthase-TrpC	unknown	unknown	gnl\|CDD\|234710
NZ_CP053452.1\|WP_171470005.1\|1567530_1568400_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171470010.1\|1575348_1576533_-\|beta-lactamase-family-protein	unknown	unknown	gnl\|CDD\|365903
NZ_CP053452.1\|WP_171470003.1\|1565140_1566730_+\|PAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|237425
NZ_CP053452.1\|WP_171470006.1\|1568598_1569534_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171470014.1\|1584703_1585966_+\|trypsin-like-peptidase-domain-containing-protein	unknown	unknown	gnl\|CDD\|379142
NZ_CP053452.1\|WP_171470002.1\|1563457_1564831_+\|sel1-repeat-family-protein	unknown	unknown	gnl\|CDD\|223861
NZ_CP053452.1\|WP_171470009.1\|1571303_1573349_-\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP053452.1\|WP_171470018.1\|1587883_1589683_+\|DUF2029-domain-containing-protein	unknown	unknown	gnl\|CDD\|378217
NZ_CP053452.1\|WP_171475974.1\|1573999_1575076_-\|DUF2891-domain-containing-protein	unknown	unknown	gnl\|CDD\|378592
NZ_CP053452.1\|WP_171470007.1\|1570021_1570339_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171470017.1\|1587032_1587887_+\|diaminopimelate-epimerase	unknown	unknown	gnl\|CDD\|234768

Protein	Function_ID	Function_description	E-value
NZ_CP053452.1\|WP_171470001.1\|1562558_1563284_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	2.9776e-102
NZ_CP053452.1\|WP_171470015.1\|1585962_1586337_+\|hypothetical-protein	gnl\|CDD\|381146	cd19919, REC_NtrC, phosphoacceptor receiver (REC) domain of DNA-binding transcriptional regulator NtrC. DNA-binding transcriptional regulator NtrC is also called nitrogen regulation protein NR(I) or nitrogen regulator I (NRI). It contains an N-terminal receiver (REC) domain, followed by a sigma-54 interaction domain, and a C-terminal helix-turn-helix DNA-binding domain. It is part of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. DNA-binding response regulator NtrC is phosphorylated by NtrB; phosphorylation of the N-terminal REC domain activates the central sigma-54 interaction domain and leads to the transcriptional activation from promoters that require sigma(54)-containing RNA polymerase. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	1.22441e-06
NZ_CP053452.1\|WP_171470008.1\|1570428_1571307_-\|hypothetical-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	7.24122e-07
NZ_CP053452.1\|WP_171470013.1\|1583002_1584535_-\|xylulose-kinase	gnl\|CDD\|212658	cd00366, FGGY, FGGY family of carbohydrate kinases. This family is predominantly composed of glycerol kinase (GK) and similar carbohydrate kinases including rhamnulokinase (RhuK), xylulokinase (XK), gluconokinase (GntK), ribulokinase (RBK), and fuculokinase (FK). These enzymes catalyze the transfer of a phosphate group, usually from ATP, to their carbohydrate substrates. The monomer of FGGY proteins contains two large domains, which are separated by a deep cleft that forms the active site. One domain is primarily involved in sugar substrate binding, and the other is mainly responsible for ATP binding. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain. Substrate-induced conformational changes and a divalent cation may be required for the catalytic activity.	1.59024e-41
NZ_CP053452.1\|WP_171470011.1\|1576787_1578260_+\|PQQ-binding-like-beta-propeller-repeat-protein	gnl\|CDD\|224437	COG1520, COG1520, FOG: WD40-like repeat [Function unknown].	7.73863e-12
NZ_CP053452.1\|WP_171470019.1\|1589696_1590479_-\|indole-3-glycerol-phosphate-synthase-TrpC	gnl\|CDD\|234710	PRK00278, trpC, indole-3-glycerol phosphate synthase TrpC.	5.0496e-133
NZ_CP053452.1\|WP_171470012.1\|1578617_1581929_+\|efflux-RND-transporter-permease-subunit	gnl\|CDD\|223911	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms].	0
NZ_CP053452.1\|WP_171470010.1\|1575348_1576533_-\|beta-lactamase-family-protein	gnl\|CDD\|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	1.29069e-65
NZ_CP053452.1\|WP_171470003.1\|1565140_1566730_+\|PAS-domain-containing-protein	gnl\|CDD\|237425	PRK13557, PRK13557, histidine kinase; Provisional.	8.20036e-135
NZ_CP053452.1\|WP_171470009.1\|1571303_1573349_-\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	5.67835e-57
NZ_CP053452.1\|WP_171470002.1\|1563457_1564831_+\|sel1-repeat-family-protein	gnl\|CDD\|223861	COG0790, COG0790, FOG: TPR repeat, SEL1 subfamily [General function prediction only].	1.54687e-47
NZ_CP053452.1\|WP_171470014.1\|1584703_1585966_+\|trypsin-like-peptidase-domain-containing-protein	gnl\|CDD\|379142	pfam13365, Trypsin_2, Trypsin-like peptidase domain. This family includes trypsin-like peptidase domains.	5.99327e-23
NZ_CP053452.1\|WP_171470018.1\|1587883_1589683_+\|DUF2029-domain-containing-protein	gnl\|CDD\|378217	pfam09594, GT87, Glycosyltransferase family 87. The enzymes in this family are glycosyltransferases. PimE is involved in phosphatidylinositol mannoside (PIM) synthesis, a major class of glycolipids in all mycobacteria. PimE is a polyprenol-phosphate-mannose-dependent mannosyltransferase that transfers the fifth mannose of PIM. The family also includes alpha(1-->3) arabinofuranosyltransferase, invloved in the synthesis of of mycobacterial arabinogalactan.	2.68907e-14
NZ_CP053452.1\|WP_171475974.1\|1573999_1575076_-\|DUF2891-domain-containing-protein	gnl\|CDD\|378592	pfam11199, DUF2891, Protein of unknown function (DUF2891). This is a bacterial family of uncharacterized proteins.	0
NZ_CP053452.1\|WP_171470017.1\|1587032_1587887_+\|diaminopimelate-epimerase	gnl\|CDD\|234768	PRK00450, dapF, diaminopimelate epimerase; Provisional.	4.72273e-132

>NZ_CP053452.1|WP_171475974.1|1573999_1575076_-|DUF2891-domain-containing-protein
MGLAAVPAAEPPAPAPRGETLTRERASAFAKLALKGARKEFPNKTGHVQLDAADMKTPKGLHPAFYGCYDWHSAVHGHWMLVRVLRAHPDLPDAKGVRAVLAEHLTAENLKAETDYFNRGEAKSFERPYGWAWLLKLAEELHTWDDPDAKKWAANLKPLAGLIANRYVEFFPKQTYPIRAGVHSNTAFGLTFAHDYAVTTGNKKLRAAIEDRARAYYAKDADAPARWEPDGADFLSPSLCEADLMRRVLPPAEFRDWFHKYLPGAVKGEPATLFAPATVTDRTDPQLVHLDGLNLSRAWCLRGILTSLPKDDPARAVLVASAAKHAEAGLKHVASGDYAGEHWLASFAVWMLALPTPE
>NZ_CP053452.1|WP_171470009.1|1571303_1573349_-|serine/threonine-protein-kinase
MSRKSSTPGFDTLTRTPLPATGWPPNVPPGEDLPTFRLPARAASSATGTGAPDPLTTTPPPKDDLKLSASAWSADDGDDFPAATRAPRVGETIQGFRLVGELGRGAFARVFLAHQEALADRPVALKVTLRPTREAERLARLQHTNVVPVYSVHDAAPAQLICMPYLGRVTLADLIRAYRVEHPSRLSGRKSTSARAARATAVDSKSASKSATDPKAPPGPARAPVWTWAAAAEPPIVGDPRAVLQVLAQLAAGLGHAHDRGILHLDIKPANVLLADTGEPMLLDFNLSFDAARPDREMVGGTMPYMAVEQLLDMRARGKGAIDRRTDLYSLGVLAFELLTGTVPFPATREQLRDLDRQTAARRQGPPALRPLNPGVTPAVEAIVRKLLAPEPVDRYQSADEVRTDVERHLADLPLWYARERSVRERFGKWRRRNPGVAPGWPPRASSAWRSGSAGPSTVGRRRSRGPRPSAAPGPRARPSIRRGSISCSSTTPAPSARGGGARRSTARRVRAAGRRGLAGAPGRAPADRRGARRPGRRPRGTDGPARRDEVAAGRDPAGIGPAGADRGGVETQRGGAGLLRRHGAGGGGPAGRGSGAGGRRNVCRARGRPRGPRAGPARPVPRRGRGARAGAVRRRDPAPRPRHRSGTRPRGGAVLSGVLPAASGAVPAGPGAASTRPASS
>NZ_CP053452.1|WP_171470008.1|1570428_1571307_-|hypothetical-protein
MKSDPRPAYQRGLMYATAKKPERAEAEFTKAIALDPNHADAYRFRALARYRLAVLKSWRKDGEKDRAAALAGAESDLAAALERGAPVLAVRLLRAHVRDARGDRAGAGADRAATKDAVLKTEADYLVRGWGRLDTDPNGALADFRKAAELNPRSLVALQNQAHVLADKLKDTEGALVVATKVADLYPEFAPARSGRAVILARLGRRGDAHEEIERARQLSEDAETTYVAASVYSITSVTHAADQTKALDLLRQAIRDGYGDLATMAHDADMNPLRAVQEYQNIMQAAKSLYR
>NZ_CP053452.1|WP_171470007.1|1570021_1570339_+|hypothetical-protein
MALIPVSAELRFPLKPARLSMNFRARLSLFALETRENPSVPGIDPTGGTAPAPVTTTTTTTATTTTDPTSIALAAATAGATVPTTNVLTATNSIYNTPVVGPTGP
>NZ_CP053452.1|WP_171470006.1|1568598_1569534_-|hypothetical-protein
MRRARIVLAVLIAVLAGLAVSALAVRWLRPPAEPAWTDDYDVTAQPPEEIAPGTVIERGPPAGWSHLVIKSLPRVRANEVVRLPSNRLMSRDDLARQVAWMFTAFTADVVPERHGHHTRYRIRAIGLGLGANVNGRDTILTSSTAESFGLKPDFFGVQKTTLDIGYRIQQQARVVIHGPSFALVDTPVTFRCGKKNRMVRFRYALLVDQPTGRLDVLAWRLGAESGGCADLSRAVLLRPDTIDEAELIPDLAEFDRLNIPNELAFGVDDLPPNRLEVALPPDLSPLVGGTKFTPDAARTLEDDLRKLLLPQ
>NZ_CP053452.1|WP_171470005.1|1567530_1568400_-|hypothetical-protein
MYTLALALLATAPAQPPAKHEDQNPLYKNLLESGLDVGGGVKVKFPAPSMPDGLDGTKQTAIIKELIGAQYSYDEFVRNSNVAPQLLKIRDIAPSDPKAPARGVDVWFVAYGDFKRLEDEKFLDRVTSTNRGGGKGGPLTNPDLAKRKIELPKGNQKREGYGHVEFDFLEKVRLNAAGHAMWSRTSESVVAAAEIDPRFLDDKEFPNQWRSITKTGGQTKVGDPNPWSGAGMYFKITKLAAPEGALFVEQHVVFAEPTGWFDGANLLRSKLSIAVQDNVRTMRREFQKK
>NZ_CP053452.1|WP_171470004.1|1566762_1567410_-|hypothetical-protein
MRRVVVAFALAFALAVLSFTFAPAAPIPKEPAPIPYFPTRTGAKWVWKTNDPKETLVVTEVNKKDAGALTVTVCWEADGEHSNFGTFLVTDKGLFSKDFAGKELNPPICLLKSPPKAGDKWETRTGLVDGLFELCQKCKVLEAEWVEVPAGKFKAFPVVSEITVSVKFGPAQQKAPEPITRTEWYAPGIGLVKLKHKRGTDDEVRELQSFTPAKE
>NZ_CP053452.1|WP_171470003.1|1565140_1566730_+|PAS-domain-containing-protein
MTPTLHLRPPQTPPLTPPPSRVLRLAAAQFALLPQAAEAMALGMIVTDATRPENPIVYCNPGFERLTGYTSEETLGRNCRFLQGPDTDPNELARLRLAVREKCACSVVLRNYRKDRTSFWNALSVTPLADADGVVTHFVGVLHDITPMKELEAQFLQAQKMEVVGRLTGGVAHDFNNLLTVINGFTEAALDTLAADHPAAAMLAEVAAAGERAAGLTRQLLAFSRKGTGRRTRADLSATTSGCEGMIRRLIGAGVALVVRVGTSMGSVAVDPGRVEQIVMNLAINARDAMPAGGTLTISTLSADVPNGAPHHADVPPGRYAVLRVTDTGHGMDAATRARIFEPFFTTKPAGRGTGLGLSTVVEIVRGAGGHVRVESEPGRGTAFTVYLPQAIAAPTDPVPDSSGEYRMRGWEVVLVVDDDAPVRAVMCLALRARGYTVLEAADATEALVLARTHDGPIHLAISDVLVPTASGAALAGELRAARPGLRVLLVSGYSGETEIDEGPDAAFLAKPFTPAALATKVRAVLDRT
>NZ_CP053452.1|WP_171470002.1|1563457_1564831_+|sel1-repeat-family-protein
MNYRIVAAPALLVTLTVCAWQGKNLITRSEPTDASAPELTTPPGDDGVAADYSEVERLWREYRGSKDFIKENSEKRIAAWKTAAEEGSAKGMVLYARCLQDGAGVTKDAVDAAGWLRKAAELSNPNAMFLLAKCYCDGEGVAKDAAATVSWLRKAAELGNTGAMVDLGKCYLDGTGVPRDVRQLVKCSRQAAERGDPMGLHDLGACYINGVGVAKDAAKAVPLFRQAAERGLALGMHALGACYFYGVGVPKDVAEAVKWFRKGAELGNAQAMAELGACYFEGDCVPKDVAEAVKWYRKGAELGSAQAMNNLGLCHRDGTGVAKDLGEAAKWYRKAAEFGYPEAVNNLGWCYLTGDGVAKDAVEGVKWFRKAVELGDTRAMKNLGGCYFNGWGVERSAAEAVNWYLKAAELGDTDAQFVLQQIREANVTDPRSGPAGTVGPQSTATSFCPSPTTKLRP
>NZ_CP053452.1|WP_171470001.1|1562558_1563284_+|ABC-transporter-ATP-binding-protein
MTDGPSHLLFADRVAKTYPDGDVHALNGVTLGVRAGQSVAITGPSGCGKSTLLNLLGMLDRPDSGQVLFRGRAVTTRREIDRFRARHIGFVFQSFFLLPTLTARENVQVPMFEGPPRTGRERAQKADELLELVGMAGRARHRPLQLSVGERQRVALARALANDPVLLLADEPTGNLDSDNADKVLDLLSALQKKHNLALIVVTHSQEVADRADRVVKMRDGRIVSDSGSDLVPAPDPAATG
>NZ_CP053452.1|WP_171470010.1|1575348_1576533_-|beta-lactamase-family-protein
MRLRLTLLGSTLLALVGPPVAPAAEPNVSDGLLPFVEKNQLAGAVVLVASADKVLATEAVGFADREARVAMTTDDLFWIASMTKPMTAAALMMLVDEKKVALDDPIEKYLPEFKAATVLAYQDKDTTLLKKPARAPTVRDCLRHTSGMPFRSALEEPTLDRFLLRDAVRGYALTPLQYEPGTKHVYSNAGINTAGRIIEVVGGTNYEDFMAKRLFVPLGMTDTVWRPTAEQMKRLAKSYKPTKDGTNLEVIPVTQLAQPLTDPHRQPVPAGGLFSTAKDTAAFGQMILRGGTHGDKRLLSEAAVRELTGTQTYGVLGKGEGGYGLGFSTSRRAKVGGPAVAGPCGHGGAYATHLWINPDNKLVTVYMVQHAGFPGEGGRARDVFEQAAAKMYGK
>NZ_CP053452.1|WP_171470011.1|1576787_1578260_+|PQQ-binding-like-beta-propeller-repeat-protein
MRRFRPVFALTVLAPLFVSDTRADDWPSFRGPQGTGVITDTKPPSDWGADKNVAWKVAVPGVAWSCPIVIGDKVILTTAFSEGQPKPKAGFGGGKGGPGGPGGGKGGPGGPGEGKGGPGGPGGGFGKGGAPPKETYQFKVICLNRTTGKLMWEKLAKEARPTIPTHGSNTYATETPVSDGERVYAYFGMTGLFCYDLAGTEIWKKDLGSYSMMFGFGTASSPVLAGDKLIVQCDNDEKSFLVALDKKTGEQKWKIDRPEKSGWSTPLVWATKDRTDLVVIGGQKIRGYDPESGQEVWALEVGGGQCSASPAADSERLYVGVGQGGGGPGGPKGGGGAGGGRAGTLFAVKAGAKGDITPKAGAASSDGVAWTAAKAWPAAASPLVYEGFVYVLDRNGGTISCFDAKTGKAEYTKERIPNAGAFWASPWAADGQIFCLDETGATHVLKAGAEFDLVRVNKLGRDMYWATPAASGGALFIRSVDSLYCIGAKP
>NZ_CP053452.1|WP_171470012.1|1578617_1581929_+|efflux-RND-transporter-permease-subunit
MNPIVFAMRYPYAVMVGVVAVLIGSGLAATRLHADVFPPLNQPVVYICQPYGGMSPDQMEGLLTNYYEFHLLYVNAVHHVESRNVTGMTLIKVFFHPGTDMGQATAELVAAVNRARFMMPPGTVPPFVARTDTGTAPVGFLVLKSDTRSIKDIQDIATLRVRPQFANIPGVSSPPAFGGNQRAIVVNVNPDAVTKQGLTLWQVTEAVSAGNPVTPSGTLKVGDRQFLVTSNAMVGAKPAQELAQVPVKPGPHPVLLGDVATIEDSADLTAGYALVNGRRSVYMLITKRADASTVTVVNDLKAALPRMRTSVPEDVDITFEFDQSPIVTEAMWGVGTEGLIGALLTGLMVLLFLRDWRSVIVVVLNIPLALAAAAFALWASGQTLNLMTLGGLALAVGILVDEATVEVENIHTQLLKFDNVARAVRTGNSETAVPRLLAMLCILAVFVPSFFMEGAARELFVPLSLAVGYSMIASYVLSSTFVPVLSVWLLRPGHPHADAKGGLFGKLMDAYEAVVARIVYRKGLVAPGYLIAALALAALLYLNLGTAIFPPTDKGQFLLRLKAPTGTRIERTEELAQEATRLIKEEAGAGNVEATVGYIGMFPTNYPIQAIHQWTSGPGECLLKVALRESSGLRVEEQKEKLRTKLDTGLKAWLAARWKEDGLPRVEIDARLPGLRLSFEPGDLVSDVMSFGAPTPVEVQVSGSDMAANLAFATALRDRLVTIPDLRDVQLNPAQDYPTISLTIDRARAATMNVTARDVGLSLVPATASSRYMQPIYWRDPKNGQAYIVQVQVPPPQIGSIMALGNIPVGQKVVAEAGASGGSGNGTGSGGEPPGVVLLRDTLAPSGGAMPGTTAEEIYRYNMRRAVSITANVATQDLGKVRAAVQRAIADSGEPARGVQVDVRGQLNTLNLVQTSLGRGLLLAILAIALLLTAYFQSIRLALVSVAAVPATLCGVGLTLWATGTTLNLQSFMGAIMALGVSVANAILLVTFAERARLLHGGAVRAAVEGGRSRLRPILMTSCAMVAGMLPMAIGASAGGDQTAPLGRAVVGGLTASTLTTLFILPAVFAVVQRRASVAGASLDPDDPNSGRYDENRVKLFDE
>NZ_CP053452.1|WP_171470013.1|1583002_1584535_-|xylulose-kinase
MSQPLRCVSPNAIIVGYDFSTGGVKALAFDLTGRTVAQVRLPTDLWTEGGVSELNLMQLEGQARAATRALNAALIRHAKLEYWLAAGVSATHHSAGRIDETLNQVRRAICWNDQTLAGYHAEGLKRLGGQDRAKELTGGPWAVRYSLSHLVKDEHTLSAADWERTEWILPHGPLAAGYLTGRFEFTSVSSAASTGIMDLRTNQWNRKMLDALAGPEHRKLAWDALPAILDMNSPIGKLVPDLLPNRHTADTLPWIFPTLDDQAAGLIGGGAVDAGQVAIILGNSAVVNSSSAQLPHSGTLDAMKLNWGPYLWMRCYSNGAQFVDVVAGKDWYKVEDDAAQVPPRCNGVSVLPFLLSEPSVGVEKPQVKWAPAEPAERPVRVRACLEALAFLLARAVREHEAAGQSVTRITVSGGMARSQLMCAILASVLNRPLERLVSDEGPALGAAVAALAGLESYLRKQQGIAEPYTAADAVAAMVKFRDRVEPVAAWVPDYARGMEAFENHLGERGA
>NZ_CP053452.1|WP_171470014.1|1584703_1585966_+|trypsin-like-peptidase-domain-containing-protein
MPRARFWTTALAALVLAPGLAPAQEKADPPRAEPVDAGASVYQKVVRSSAWVLSDRGGGRLATGSGTLIDKGRRLVLTNYHVVGEVKTATVFFPVFEGKKPVSDRKYYLDRKGKLGIPGEVIEIDKQADLVLIRLDRVPEGVPDLALAAESPDPGQAVHSIGNPGKSGALWVYTPGKVRQVYSKKWKAKLDERTTVSFDAKVIETDSPTNPGDSGGPLVNDRGELVGVTQGGALDAQAISIFVDLSEVKRLVNRRAVQALRSDARTSADVKDPPKPAREKPLESKDDGKFFGEEAWKKVAPAAEKLLKQKNIDFVVETMMAPKGDAEKLKAMTGTEREKFFKELAEERTKELKLNGILILVSKAPATLYVYDPHPADFPDGFASKLKSALIASFREKKFDEGLQKAIDMTLEAKGLGEKK
>NZ_CP053452.1|WP_171470015.1|1585962_1586337_+|hypothetical-protein
MTEATCHGLMLCDDLIFFSRVSGAARAAGLTVRMVRSAADLLTAARAAQPGGVIVDVHNPGLDLPALLAVLKDACPEMPRVTAYGSHVEAAVLRAARQAGCDRVLPRSQFVEELEGQIREWLAK
>NZ_CP053452.1|WP_171470016.1|1586517_1586817_-|hypothetical-protein
MGTAKPKTRTVRIVRPPDADGVGVLCIETDGTCQFYTFLELRCEIGGRGFAVHRLGQGDLYHVRVGAPEDVSCECMGFLRWGHCKHVSALAALIRQGEV
>NZ_CP053452.1|WP_171470017.1|1587032_1587887_+|diaminopimelate-epimerase
MRFTKMHGLGNDYVYVDCVRTRPPANPAQLSQAVSDRHFGIGADGLILICPSERADARMRMFNADGSESEMCGNGIRCVAKFVHDHGIATKSRLTIETGRGVLGLDLEVRDGKAVRVRVNMGEPILESAKIPTTLPGDPPVNAKLVAGGTTFEVTCVSMGNPHAVVYAGDEFFRTDTRDLVAELGPKLEYHEAFPRRINAHFVRVHSPSEVTMRTWERGSGITLACGTGACSVCVAGVLTGRTGRKLLAHLPGGDLELEWAEADNCVYMTGPATEVFTGEWPTA
>NZ_CP053452.1|WP_171470018.1|1587883_1589683_+|DUF2029-domain-containing-protein
MTAPPSPPDHGYVFPPRYWAWLGAPRTLAVLLWVAAIGCGVAFTYRSFHWFDSPATEAPDRRRADGNAGHAQIDFGGQWLMGRMLVTGHGRELYHRQRQRRVLQDGFLIEHEAPIQRGDVLPQGATQSPARPGEDWQHDSANLMNWFMGSDPTTEWKVVGGSAVAPLARSPGNPLFGIALEEAAAARVTRDIVETVNKPAVGGPLYPPVHVLFYAPLGAIDSPQRAYHVFQVFCALLIPVAGLGVNVLTRGRIWWSVATLGLFLFPGTRGALDLGQNPTLSLCIVIWGWALASRGRNVGGGMVWGLLAFKPVWAAAFFLVPLLMRRWRFCLAMVLTGAALGLLTLPFVGVDSWFHWLQIGSEASDLYKVNNNWIHLSRDLQGLPRRVLLDFDTPDEAERKSGLADALALGLLGAVFAATVVVYALRGDRTRPTGLSAGFLFLGAYLTCFHFMYYDVLLASVGCAVLFADPKRYLRTEAFAVTPAPVEPAVPADRALPAPAAPAKPLGARMLGYVNSFPLTVVVALFVLENSLSGMELEATVGIRYYATPATDGSTNVRVPRLKGDTGPRYPTDTFLVLALWAWCGWRLVRGDETRAAEK
>NZ_CP053452.1|WP_171470019.1|1589696_1590479_-|indole-3-glycerol-phosphate-synthase-TrpC
MTTILDRIVETKRGEIARAKATVSEAELERAVADLPPARDFHAAIRRFNQITLIAEVKKASPSAGVIRPDFDPVAIATTYEAHGAAAISVLTDVEYFQGSLKYLTAVKAAVGVPVLRKDFILDRYQLLEARAAGADAVLLIAECLPGERLAALQSEAVALGLHTLVELHDADQLPRVLGCGAPVIGINNRDLRTFTTRLEHTLELLAQIPADRTVVSESGIKTHADLRTLGEAGARAVLVGESLMRAGDIGAALDALRGR

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Crispr_ID: NZ_CP053452_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053452_6

1578295-1578441

Orphan

Consensus_repeat	Method
CGCAGGCAACGCAGATCCGAAGAACAGAATTCTTCTTGTCTTCATC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP053452_6

>merge|NZ_CP053452|6|1578295-1578441|CRISPRCasFinder
CGCAGGCAACGCAGATCCGAAGAACAGAATTCTTCTTGTCTTCATCTGCGTCGCCTGCGTCATCTGTGGCTCTTCGCACTTGCAGAATGAGCCGCAGATGACGCAGGCAACGCAGATCCGAAGAACAGATTTCTTCTTGTCTTCATC

>NZ_CP053452|6|6|1578295-1578441|CRISPRCasFinder
CGCAGGCAACGCAGATCCGAAGAACAGAATTCTTCTTGTCTTCATC	TGCGTCGCCTGCGTCATCTGTGGCTCTTCGCACTTGCAGAATGAGCCGCAGATGA
CGCAGGCAACGCAGATCCGAAGAACAGATTTCTTCTTGTCTTCATC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053452.1\|WP_171470016.1\|1586517_1586817_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171470020.1\|1590678_1590957_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171470004.1\|1566762_1567410_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171470008.1\|1570428_1571307_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP053452.1\|WP_171470013.1\|1583002_1584535_-\|xylulose-kinase	unknown	unknown	gnl\|CDD\|212658
NZ_CP053452.1\|WP_171470011.1\|1576787_1578260_+\|PQQ-binding-like-beta-propeller-repeat-protein	unknown	unknown	gnl\|CDD\|224437
NZ_CP053452.1\|WP_171470021.1\|1591015_1591783_-\|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|226476
NZ_CP053452.1\|WP_171470015.1\|1585962_1586337_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|381146
NZ_CP053452.1\|WP_171470019.1\|1589696_1590479_-\|indole-3-glycerol-phosphate-synthase-TrpC	unknown	unknown	gnl\|CDD\|234710
NZ_CP053452.1\|WP_171470012.1\|1578617_1581929_+\|efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223911
NZ_CP053452.1\|WP_171470010.1\|1575348_1576533_-\|beta-lactamase-family-protein	unknown	unknown	gnl\|CDD\|365903
NZ_CP053452.1\|WP_171470003.1\|1565140_1566730_+\|PAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|237425
NZ_CP053452.1\|WP_171470006.1\|1568598_1569534_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171470014.1\|1584703_1585966_+\|trypsin-like-peptidase-domain-containing-protein	unknown	unknown	gnl\|CDD\|379142
NZ_CP053452.1\|WP_171470005.1\|1567530_1568400_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171470009.1\|1571303_1573349_-\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP053452.1\|WP_171470018.1\|1587883_1589683_+\|DUF2029-domain-containing-protein	unknown	unknown	gnl\|CDD\|378217
NZ_CP053452.1\|WP_171475974.1\|1573999_1575076_-\|DUF2891-domain-containing-protein	unknown	unknown	gnl\|CDD\|378592
NZ_CP053452.1\|WP_171470007.1\|1570021_1570339_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171470017.1\|1587032_1587887_+\|diaminopimelate-epimerase	unknown	unknown	gnl\|CDD\|234768

Protein	Function_ID	Function_description	E-value
NZ_CP053452.1\|WP_171470015.1\|1585962_1586337_+\|hypothetical-protein	gnl\|CDD\|381146	cd19919, REC_NtrC, phosphoacceptor receiver (REC) domain of DNA-binding transcriptional regulator NtrC. DNA-binding transcriptional regulator NtrC is also called nitrogen regulation protein NR(I) or nitrogen regulator I (NRI). It contains an N-terminal receiver (REC) domain, followed by a sigma-54 interaction domain, and a C-terminal helix-turn-helix DNA-binding domain. It is part of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. DNA-binding response regulator NtrC is phosphorylated by NtrB; phosphorylation of the N-terminal REC domain activates the central sigma-54 interaction domain and leads to the transcriptional activation from promoters that require sigma(54)-containing RNA polymerase. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	1.22441e-06
NZ_CP053452.1\|WP_171470008.1\|1570428_1571307_-\|hypothetical-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	7.24122e-07
NZ_CP053452.1\|WP_171470013.1\|1583002_1584535_-\|xylulose-kinase	gnl\|CDD\|212658	cd00366, FGGY, FGGY family of carbohydrate kinases. This family is predominantly composed of glycerol kinase (GK) and similar carbohydrate kinases including rhamnulokinase (RhuK), xylulokinase (XK), gluconokinase (GntK), ribulokinase (RBK), and fuculokinase (FK). These enzymes catalyze the transfer of a phosphate group, usually from ATP, to their carbohydrate substrates. The monomer of FGGY proteins contains two large domains, which are separated by a deep cleft that forms the active site. One domain is primarily involved in sugar substrate binding, and the other is mainly responsible for ATP binding. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain. Substrate-induced conformational changes and a divalent cation may be required for the catalytic activity.	1.59024e-41
NZ_CP053452.1\|WP_171470011.1\|1576787_1578260_+\|PQQ-binding-like-beta-propeller-repeat-protein	gnl\|CDD\|224437	COG1520, COG1520, FOG: WD40-like repeat [Function unknown].	7.73863e-12
NZ_CP053452.1\|WP_171470021.1\|1591015_1591783_-\|SDR-family-NAD(P)-dependent-oxidoreductase	gnl\|CDD\|226476	COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane].	1.52899e-107
NZ_CP053452.1\|WP_171470019.1\|1589696_1590479_-\|indole-3-glycerol-phosphate-synthase-TrpC	gnl\|CDD\|234710	PRK00278, trpC, indole-3-glycerol phosphate synthase TrpC.	5.0496e-133
NZ_CP053452.1\|WP_171470012.1\|1578617_1581929_+\|efflux-RND-transporter-permease-subunit	gnl\|CDD\|223911	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms].	0
NZ_CP053452.1\|WP_171470010.1\|1575348_1576533_-\|beta-lactamase-family-protein	gnl\|CDD\|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	1.29069e-65
NZ_CP053452.1\|WP_171470017.1\|1587032_1587887_+\|diaminopimelate-epimerase	gnl\|CDD\|234768	PRK00450, dapF, diaminopimelate epimerase; Provisional.	4.72273e-132
NZ_CP053452.1\|WP_171470009.1\|1571303_1573349_-\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	5.67835e-57
NZ_CP053452.1\|WP_171470014.1\|1584703_1585966_+\|trypsin-like-peptidase-domain-containing-protein	gnl\|CDD\|379142	pfam13365, Trypsin_2, Trypsin-like peptidase domain. This family includes trypsin-like peptidase domains.	5.99327e-23
NZ_CP053452.1\|WP_171470018.1\|1587883_1589683_+\|DUF2029-domain-containing-protein	gnl\|CDD\|378217	pfam09594, GT87, Glycosyltransferase family 87. The enzymes in this family are glycosyltransferases. PimE is involved in phosphatidylinositol mannoside (PIM) synthesis, a major class of glycolipids in all mycobacteria. PimE is a polyprenol-phosphate-mannose-dependent mannosyltransferase that transfers the fifth mannose of PIM. The family also includes alpha(1-->3) arabinofuranosyltransferase, invloved in the synthesis of of mycobacterial arabinogalactan.	2.68907e-14
NZ_CP053452.1\|WP_171475974.1\|1573999_1575076_-\|DUF2891-domain-containing-protein	gnl\|CDD\|378592	pfam11199, DUF2891, Protein of unknown function (DUF2891). This is a bacterial family of uncharacterized proteins.	0
NZ_CP053452.1\|WP_171470003.1\|1565140_1566730_+\|PAS-domain-containing-protein	gnl\|CDD\|237425	PRK13557, PRK13557, histidine kinase; Provisional.	8.20036e-135

>NZ_CP053452.1|WP_171470011.1|1576787_1578260_+|PQQ-binding-like-beta-propeller-repeat-protein
MRRFRPVFALTVLAPLFVSDTRADDWPSFRGPQGTGVITDTKPPSDWGADKNVAWKVAVPGVAWSCPIVIGDKVILTTAFSEGQPKPKAGFGGGKGGPGGPGGGKGGPGGPGEGKGGPGGPGGGFGKGGAPPKETYQFKVICLNRTTGKLMWEKLAKEARPTIPTHGSNTYATETPVSDGERVYAYFGMTGLFCYDLAGTEIWKKDLGSYSMMFGFGTASSPVLAGDKLIVQCDNDEKSFLVALDKKTGEQKWKIDRPEKSGWSTPLVWATKDRTDLVVIGGQKIRGYDPESGQEVWALEVGGGQCSASPAADSERLYVGVGQGGGGPGGPKGGGGAGGGRAGTLFAVKAGAKGDITPKAGAASSDGVAWTAAKAWPAAASPLVYEGFVYVLDRNGGTISCFDAKTGKAEYTKERIPNAGAFWASPWAADGQIFCLDETGATHVLKAGAEFDLVRVNKLGRDMYWATPAASGGALFIRSVDSLYCIGAKP
>NZ_CP053452.1|WP_171470010.1|1575348_1576533_-|beta-lactamase-family-protein
MRLRLTLLGSTLLALVGPPVAPAAEPNVSDGLLPFVEKNQLAGAVVLVASADKVLATEAVGFADREARVAMTTDDLFWIASMTKPMTAAALMMLVDEKKVALDDPIEKYLPEFKAATVLAYQDKDTTLLKKPARAPTVRDCLRHTSGMPFRSALEEPTLDRFLLRDAVRGYALTPLQYEPGTKHVYSNAGINTAGRIIEVVGGTNYEDFMAKRLFVPLGMTDTVWRPTAEQMKRLAKSYKPTKDGTNLEVIPVTQLAQPLTDPHRQPVPAGGLFSTAKDTAAFGQMILRGGTHGDKRLLSEAAVRELTGTQTYGVLGKGEGGYGLGFSTSRRAKVGGPAVAGPCGHGGAYATHLWINPDNKLVTVYMVQHAGFPGEGGRARDVFEQAAAKMYGK
>NZ_CP053452.1|WP_171475974.1|1573999_1575076_-|DUF2891-domain-containing-protein
MGLAAVPAAEPPAPAPRGETLTRERASAFAKLALKGARKEFPNKTGHVQLDAADMKTPKGLHPAFYGCYDWHSAVHGHWMLVRVLRAHPDLPDAKGVRAVLAEHLTAENLKAETDYFNRGEAKSFERPYGWAWLLKLAEELHTWDDPDAKKWAANLKPLAGLIANRYVEFFPKQTYPIRAGVHSNTAFGLTFAHDYAVTTGNKKLRAAIEDRARAYYAKDADAPARWEPDGADFLSPSLCEADLMRRVLPPAEFRDWFHKYLPGAVKGEPATLFAPATVTDRTDPQLVHLDGLNLSRAWCLRGILTSLPKDDPARAVLVASAAKHAEAGLKHVASGDYAGEHWLASFAVWMLALPTPE
>NZ_CP053452.1|WP_171470009.1|1571303_1573349_-|serine/threonine-protein-kinase
MSRKSSTPGFDTLTRTPLPATGWPPNVPPGEDLPTFRLPARAASSATGTGAPDPLTTTPPPKDDLKLSASAWSADDGDDFPAATRAPRVGETIQGFRLVGELGRGAFARVFLAHQEALADRPVALKVTLRPTREAERLARLQHTNVVPVYSVHDAAPAQLICMPYLGRVTLADLIRAYRVEHPSRLSGRKSTSARAARATAVDSKSASKSATDPKAPPGPARAPVWTWAAAAEPPIVGDPRAVLQVLAQLAAGLGHAHDRGILHLDIKPANVLLADTGEPMLLDFNLSFDAARPDREMVGGTMPYMAVEQLLDMRARGKGAIDRRTDLYSLGVLAFELLTGTVPFPATREQLRDLDRQTAARRQGPPALRPLNPGVTPAVEAIVRKLLAPEPVDRYQSADEVRTDVERHLADLPLWYARERSVRERFGKWRRRNPGVAPGWPPRASSAWRSGSAGPSTVGRRRSRGPRPSAAPGPRARPSIRRGSISCSSTTPAPSARGGGARRSTARRVRAAGRRGLAGAPGRAPADRRGARRPGRRPRGTDGPARRDEVAAGRDPAGIGPAGADRGGVETQRGGAGLLRRHGAGGGGPAGRGSGAGGRRNVCRARGRPRGPRAGPARPVPRRGRGARAGAVRRRDPAPRPRHRSGTRPRGGAVLSGVLPAASGAVPAGPGAASTRPASS
>NZ_CP053452.1|WP_171470008.1|1570428_1571307_-|hypothetical-protein
MKSDPRPAYQRGLMYATAKKPERAEAEFTKAIALDPNHADAYRFRALARYRLAVLKSWRKDGEKDRAAALAGAESDLAAALERGAPVLAVRLLRAHVRDARGDRAGAGADRAATKDAVLKTEADYLVRGWGRLDTDPNGALADFRKAAELNPRSLVALQNQAHVLADKLKDTEGALVVATKVADLYPEFAPARSGRAVILARLGRRGDAHEEIERARQLSEDAETTYVAASVYSITSVTHAADQTKALDLLRQAIRDGYGDLATMAHDADMNPLRAVQEYQNIMQAAKSLYR
>NZ_CP053452.1|WP_171470007.1|1570021_1570339_+|hypothetical-protein
MALIPVSAELRFPLKPARLSMNFRARLSLFALETRENPSVPGIDPTGGTAPAPVTTTTTTTATTTTDPTSIALAAATAGATVPTTNVLTATNSIYNTPVVGPTGP
>NZ_CP053452.1|WP_171470006.1|1568598_1569534_-|hypothetical-protein
MRRARIVLAVLIAVLAGLAVSALAVRWLRPPAEPAWTDDYDVTAQPPEEIAPGTVIERGPPAGWSHLVIKSLPRVRANEVVRLPSNRLMSRDDLARQVAWMFTAFTADVVPERHGHHTRYRIRAIGLGLGANVNGRDTILTSSTAESFGLKPDFFGVQKTTLDIGYRIQQQARVVIHGPSFALVDTPVTFRCGKKNRMVRFRYALLVDQPTGRLDVLAWRLGAESGGCADLSRAVLLRPDTIDEAELIPDLAEFDRLNIPNELAFGVDDLPPNRLEVALPPDLSPLVGGTKFTPDAARTLEDDLRKLLLPQ
>NZ_CP053452.1|WP_171470005.1|1567530_1568400_-|hypothetical-protein
MYTLALALLATAPAQPPAKHEDQNPLYKNLLESGLDVGGGVKVKFPAPSMPDGLDGTKQTAIIKELIGAQYSYDEFVRNSNVAPQLLKIRDIAPSDPKAPARGVDVWFVAYGDFKRLEDEKFLDRVTSTNRGGGKGGPLTNPDLAKRKIELPKGNQKREGYGHVEFDFLEKVRLNAAGHAMWSRTSESVVAAAEIDPRFLDDKEFPNQWRSITKTGGQTKVGDPNPWSGAGMYFKITKLAAPEGALFVEQHVVFAEPTGWFDGANLLRSKLSIAVQDNVRTMRREFQKK
>NZ_CP053452.1|WP_171470004.1|1566762_1567410_-|hypothetical-protein
MRRVVVAFALAFALAVLSFTFAPAAPIPKEPAPIPYFPTRTGAKWVWKTNDPKETLVVTEVNKKDAGALTVTVCWEADGEHSNFGTFLVTDKGLFSKDFAGKELNPPICLLKSPPKAGDKWETRTGLVDGLFELCQKCKVLEAEWVEVPAGKFKAFPVVSEITVSVKFGPAQQKAPEPITRTEWYAPGIGLVKLKHKRGTDDEVRELQSFTPAKE
>NZ_CP053452.1|WP_171470003.1|1565140_1566730_+|PAS-domain-containing-protein
MTPTLHLRPPQTPPLTPPPSRVLRLAAAQFALLPQAAEAMALGMIVTDATRPENPIVYCNPGFERLTGYTSEETLGRNCRFLQGPDTDPNELARLRLAVREKCACSVVLRNYRKDRTSFWNALSVTPLADADGVVTHFVGVLHDITPMKELEAQFLQAQKMEVVGRLTGGVAHDFNNLLTVINGFTEAALDTLAADHPAAAMLAEVAAAGERAAGLTRQLLAFSRKGTGRRTRADLSATTSGCEGMIRRLIGAGVALVVRVGTSMGSVAVDPGRVEQIVMNLAINARDAMPAGGTLTISTLSADVPNGAPHHADVPPGRYAVLRVTDTGHGMDAATRARIFEPFFTTKPAGRGTGLGLSTVVEIVRGAGGHVRVESEPGRGTAFTVYLPQAIAAPTDPVPDSSGEYRMRGWEVVLVVDDDAPVRAVMCLALRARGYTVLEAADATEALVLARTHDGPIHLAISDVLVPTASGAALAGELRAARPGLRVLLVSGYSGETEIDEGPDAAFLAKPFTPAALATKVRAVLDRT
>NZ_CP053452.1|WP_171470012.1|1578617_1581929_+|efflux-RND-transporter-permease-subunit
MNPIVFAMRYPYAVMVGVVAVLIGSGLAATRLHADVFPPLNQPVVYICQPYGGMSPDQMEGLLTNYYEFHLLYVNAVHHVESRNVTGMTLIKVFFHPGTDMGQATAELVAAVNRARFMMPPGTVPPFVARTDTGTAPVGFLVLKSDTRSIKDIQDIATLRVRPQFANIPGVSSPPAFGGNQRAIVVNVNPDAVTKQGLTLWQVTEAVSAGNPVTPSGTLKVGDRQFLVTSNAMVGAKPAQELAQVPVKPGPHPVLLGDVATIEDSADLTAGYALVNGRRSVYMLITKRADASTVTVVNDLKAALPRMRTSVPEDVDITFEFDQSPIVTEAMWGVGTEGLIGALLTGLMVLLFLRDWRSVIVVVLNIPLALAAAAFALWASGQTLNLMTLGGLALAVGILVDEATVEVENIHTQLLKFDNVARAVRTGNSETAVPRLLAMLCILAVFVPSFFMEGAARELFVPLSLAVGYSMIASYVLSSTFVPVLSVWLLRPGHPHADAKGGLFGKLMDAYEAVVARIVYRKGLVAPGYLIAALALAALLYLNLGTAIFPPTDKGQFLLRLKAPTGTRIERTEELAQEATRLIKEEAGAGNVEATVGYIGMFPTNYPIQAIHQWTSGPGECLLKVALRESSGLRVEEQKEKLRTKLDTGLKAWLAARWKEDGLPRVEIDARLPGLRLSFEPGDLVSDVMSFGAPTPVEVQVSGSDMAANLAFATALRDRLVTIPDLRDVQLNPAQDYPTISLTIDRARAATMNVTARDVGLSLVPATASSRYMQPIYWRDPKNGQAYIVQVQVPPPQIGSIMALGNIPVGQKVVAEAGASGGSGNGTGSGGEPPGVVLLRDTLAPSGGAMPGTTAEEIYRYNMRRAVSITANVATQDLGKVRAAVQRAIADSGEPARGVQVDVRGQLNTLNLVQTSLGRGLLLAILAIALLLTAYFQSIRLALVSVAAVPATLCGVGLTLWATGTTLNLQSFMGAIMALGVSVANAILLVTFAERARLLHGGAVRAAVEGGRSRLRPILMTSCAMVAGMLPMAIGASAGGDQTAPLGRAVVGGLTASTLTTLFILPAVFAVVQRRASVAGASLDPDDPNSGRYDENRVKLFDE
>NZ_CP053452.1|WP_171470013.1|1583002_1584535_-|xylulose-kinase
MSQPLRCVSPNAIIVGYDFSTGGVKALAFDLTGRTVAQVRLPTDLWTEGGVSELNLMQLEGQARAATRALNAALIRHAKLEYWLAAGVSATHHSAGRIDETLNQVRRAICWNDQTLAGYHAEGLKRLGGQDRAKELTGGPWAVRYSLSHLVKDEHTLSAADWERTEWILPHGPLAAGYLTGRFEFTSVSSAASTGIMDLRTNQWNRKMLDALAGPEHRKLAWDALPAILDMNSPIGKLVPDLLPNRHTADTLPWIFPTLDDQAAGLIGGGAVDAGQVAIILGNSAVVNSSSAQLPHSGTLDAMKLNWGPYLWMRCYSNGAQFVDVVAGKDWYKVEDDAAQVPPRCNGVSVLPFLLSEPSVGVEKPQVKWAPAEPAERPVRVRACLEALAFLLARAVREHEAAGQSVTRITVSGGMARSQLMCAILASVLNRPLERLVSDEGPALGAAVAALAGLESYLRKQQGIAEPYTAADAVAAMVKFRDRVEPVAAWVPDYARGMEAFENHLGERGA
>NZ_CP053452.1|WP_171470014.1|1584703_1585966_+|trypsin-like-peptidase-domain-containing-protein
MPRARFWTTALAALVLAPGLAPAQEKADPPRAEPVDAGASVYQKVVRSSAWVLSDRGGGRLATGSGTLIDKGRRLVLTNYHVVGEVKTATVFFPVFEGKKPVSDRKYYLDRKGKLGIPGEVIEIDKQADLVLIRLDRVPEGVPDLALAAESPDPGQAVHSIGNPGKSGALWVYTPGKVRQVYSKKWKAKLDERTTVSFDAKVIETDSPTNPGDSGGPLVNDRGELVGVTQGGALDAQAISIFVDLSEVKRLVNRRAVQALRSDARTSADVKDPPKPAREKPLESKDDGKFFGEEAWKKVAPAAEKLLKQKNIDFVVETMMAPKGDAEKLKAMTGTEREKFFKELAEERTKELKLNGILILVSKAPATLYVYDPHPADFPDGFASKLKSALIASFREKKFDEGLQKAIDMTLEAKGLGEKK
>NZ_CP053452.1|WP_171470015.1|1585962_1586337_+|hypothetical-protein
MTEATCHGLMLCDDLIFFSRVSGAARAAGLTVRMVRSAADLLTAARAAQPGGVIVDVHNPGLDLPALLAVLKDACPEMPRVTAYGSHVEAAVLRAARQAGCDRVLPRSQFVEELEGQIREWLAK
>NZ_CP053452.1|WP_171470016.1|1586517_1586817_-|hypothetical-protein
MGTAKPKTRTVRIVRPPDADGVGVLCIETDGTCQFYTFLELRCEIGGRGFAVHRLGQGDLYHVRVGAPEDVSCECMGFLRWGHCKHVSALAALIRQGEV
>NZ_CP053452.1|WP_171470017.1|1587032_1587887_+|diaminopimelate-epimerase
MRFTKMHGLGNDYVYVDCVRTRPPANPAQLSQAVSDRHFGIGADGLILICPSERADARMRMFNADGSESEMCGNGIRCVAKFVHDHGIATKSRLTIETGRGVLGLDLEVRDGKAVRVRVNMGEPILESAKIPTTLPGDPPVNAKLVAGGTTFEVTCVSMGNPHAVVYAGDEFFRTDTRDLVAELGPKLEYHEAFPRRINAHFVRVHSPSEVTMRTWERGSGITLACGTGACSVCVAGVLTGRTGRKLLAHLPGGDLELEWAEADNCVYMTGPATEVFTGEWPTA
>NZ_CP053452.1|WP_171470018.1|1587883_1589683_+|DUF2029-domain-containing-protein
MTAPPSPPDHGYVFPPRYWAWLGAPRTLAVLLWVAAIGCGVAFTYRSFHWFDSPATEAPDRRRADGNAGHAQIDFGGQWLMGRMLVTGHGRELYHRQRQRRVLQDGFLIEHEAPIQRGDVLPQGATQSPARPGEDWQHDSANLMNWFMGSDPTTEWKVVGGSAVAPLARSPGNPLFGIALEEAAAARVTRDIVETVNKPAVGGPLYPPVHVLFYAPLGAIDSPQRAYHVFQVFCALLIPVAGLGVNVLTRGRIWWSVATLGLFLFPGTRGALDLGQNPTLSLCIVIWGWALASRGRNVGGGMVWGLLAFKPVWAAAFFLVPLLMRRWRFCLAMVLTGAALGLLTLPFVGVDSWFHWLQIGSEASDLYKVNNNWIHLSRDLQGLPRRVLLDFDTPDEAERKSGLADALALGLLGAVFAATVVVYALRGDRTRPTGLSAGFLFLGAYLTCFHFMYYDVLLASVGCAVLFADPKRYLRTEAFAVTPAPVEPAVPADRALPAPAAPAKPLGARMLGYVNSFPLTVVVALFVLENSLSGMELEATVGIRYYATPATDGSTNVRVPRLKGDTGPRYPTDTFLVLALWAWCGWRLVRGDETRAAEK
>NZ_CP053452.1|WP_171470019.1|1589696_1590479_-|indole-3-glycerol-phosphate-synthase-TrpC
MTTILDRIVETKRGEIARAKATVSEAELERAVADLPPARDFHAAIRRFNQITLIAEVKKASPSAGVIRPDFDPVAIATTYEAHGAAAISVLTDVEYFQGSLKYLTAVKAAVGVPVLRKDFILDRYQLLEARAAGADAVLLIAECLPGERLAALQSEAVALGLHTLVELHDADQLPRVLGCGAPVIGINNRDLRTFTTRLEHTLELLAQIPADRTVVSESGIKTHADLRTLGEAGARAVLVGESLMRAGDIGAALDALRGR
>NZ_CP053452.1|WP_171470020.1|1590678_1590957_+|hypothetical-protein
MAKGAARPAERHSVRWRCDKLLDRTKAAKTDETFRIQCDHLTAFCKTFGARSTDALKAHEVNDRLDQGDRTSSAKALGVTIIKVTHISDTIA
>NZ_CP053452.1|WP_171470021.1|1591015_1591783_-|SDR-family-NAD(P)-dependent-oxidoreductase
MNPTGNTILITGGGSGIGRALAEAFHALGNRVVIAGRRRSTLAEVAAANPGMAYAELDIDDPAAVRAFAARVTAEHPALNVLINNAGIMRPEDLVSGRYDPADAEAIVATNLLGPIRLTAALLPHLRAQPRSAVVNVTSGLAFVPLAATPTYSATKAAVHSYTVSLRHQLRGTTTEVIELIPPYVQTDLTPGQASDPRAMPLVDFIAEVMRIFTTRPDATEVVVERCKPLRFAAENGSFGAVFSALNPTGSTHGH

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Crispr_ID: NZ_CP053452_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053452_7

1730272-1730384

Orphan

Consensus_repeat	Method
CCGCCCGCCCGACCACGGGCGCCCCGGCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP053452_7

>merge|NZ_CP053452|7|1730272-1730384|CRISPRCasFinder
CCGGCCCGCAGACCGCCGGGACCCCGGCCGCCCGCCCGACCACGGGCGCCCCGGCCTCCGGGGCCCAGACCGCCGGGACCCCGACCGCCCGCCCGACCACGGGCGCCCCGGCC

>NZ_CP053452|7|7|1730272-1730384|CRISPRCasFinder
CCGGCCCGCAGACCGCCGGGACCCCGGCC	GCCCGCCCGACCACGGGCGCCCCGGCCTCCGGGGCCCAGACCGCCGGGACCCCGA
CCGCCCGCCCGACCACGGGCGCCCCGGCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053452.1\|WP_171470120.1\|1734153_1735872_+\|RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|224511
NZ_CP053452.1\|WP_171470115.1\|1726119_1727367_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171470125.1\|1748022_1749633_+\|PAS-domain-S-box-protein	unknown	unknown	gnl\|CDD\|182070
NZ_CP053452.1\|WP_171470109.1\|1715473_1717993_-\|DUF1553-domain-containing-protein	unknown	unknown	gnl\|CDD\|377876
NZ_CP053452.1\|WP_171475980.1\|1747239_1747515_-\|DUF1508-domain-containing-protein	unknown	unknown	gnl\|CDD\|225956
NZ_CP053452.1\|WP_171470123.1\|1744407_1744941_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171470124.1\|1745053_1747108_+\|PQQ-binding-like-beta-propeller-repeat-protein	unknown	unknown	gnl\|CDD\|225201
NZ_CP053452.1\|WP_171470112.1\|1721431_1722931_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340877
NZ_CP053452.1\|WP_171470110.1\|1719121_1720456_+\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP053452.1\|WP_171470117.1\|1728416_1729229_+\|sugar-phosphate-isomerase/epimerase	unknown	unknown	gnl\|CDD\|224007
NZ_CP053452.1\|WP_171470119.1\|1730998_1733833_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274175
NZ_CP053452.1\|WP_171470111.1\|1720456_1720825_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226809
NZ_CP053452.1\|WP_171470108.1\|1713867_1715349_-\|enterochelin-esterase	unknown	unknown	gnl\|CDD\|366286
NZ_CP053452.1\|WP_171470121.1\|1736045_1740245_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|275380
NZ_CP053452.1\|WP_171470114.1\|1724109_1726107_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366129
NZ_CP053452.1\|WP_171470122.1\|1740422_1743917_+\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|238121
NZ_CP053452.1\|WP_171470113.1\|1723141_1724110_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235334
NZ_CP053452.1\|WP_171470126.1\|1749566_1751582_+\|PAS-domain-S-box-protein	unknown	unknown	gnl\|CDD\|237425
NZ_CP053452.1\|WP_171470116.1\|1727462_1728329_+\|branched-chain-amino-acid-aminotransferase	unknown	unknown	gnl\|CDD\|181025
NZ_CP053452.1\|WP_171470127.1\|1751772_1752591_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP053452.1\|WP_171470120.1\|1734153_1735872_+\|RNA-polymerase-sigma-factor	gnl\|CDD\|224511	COG1595, RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription].	6.88396e-22
NZ_CP053452.1\|WP_171470113.1\|1723141_1724110_+\|hypothetical-protein	gnl\|CDD\|235334	PRK05035, PRK05035, electron transport complex protein RnfC; Provisional.	0.000812951
NZ_CP053452.1\|WP_171470109.1\|1715473_1717993_-\|DUF1553-domain-containing-protein	gnl\|CDD\|377876	pfam07587, PSD1, Protein of unknown function (DUF1553). A family of proteins found in Rhodopirellula baltica.	2.17024e-51
NZ_CP053452.1\|WP_171475980.1\|1747239_1747515_-\|DUF1508-domain-containing-protein	gnl\|CDD\|225956	COG3422, COG3422, Uncharacterized conserved protein [Function unknown].	8.44819e-07
NZ_CP053452.1\|WP_171470124.1\|1745053_1747108_+\|PQQ-binding-like-beta-propeller-repeat-protein	gnl\|CDD\|225201	COG2319, COG2319, FOG: WD40 repeat [General function prediction only].	4.12038e-27
NZ_CP053452.1\|WP_171470125.1\|1748022_1749633_+\|PAS-domain-S-box-protein	gnl\|CDD\|182070	PRK09776, PRK09776, putative diguanylate cyclase; Provisional.	3.48128e-31
NZ_CP053452.1\|WP_171470110.1\|1719121_1720456_+\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	6.87297e-79
NZ_CP053452.1\|WP_171470117.1\|1728416_1729229_+\|sugar-phosphate-isomerase/epimerase	gnl\|CDD\|224007	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism].	1.00753e-33
NZ_CP053452.1\|WP_171470119.1\|1730998_1733833_+\|hypothetical-protein	gnl\|CDD\|274175	TIGR02517, Putative_type_II_secretion_system_protein_D, type II secretion system protein D. In Gram-negative bacteria, proteins that have first crossed the inner member by Sec-dependent protein transport can be exported across the outer membrane by type II secretion, also called the main terminal branch of the general secretion pathway. Members of this family are general secretion pathway protein D. In Yersinia enterocolitica, a second member of this family is part of a novel second type II secretion system specifically associated with virulence (See ). This family is closely homologous to the type IV pilus outer membrane secretin PilQ (TIGR02515) and to the type III secretion system pore YscC/HrcC (TIGR02516). [Protein fate, Protein and peptide secretion and trafficking].	2.64622e-19
NZ_CP053452.1\|WP_171470111.1\|1720456_1720825_-\|hypothetical-protein	gnl\|CDD\|226809	COG4372, COG4372, Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown].	0.000905599
NZ_CP053452.1\|WP_171470108.1\|1713867_1715349_-\|enterochelin-esterase	gnl\|CDD\|366286	pfam00756, Esterase, Putative esterase. This family contains Esterase D. However it is not clear if all members of the family have the same function. This family is related to the pfam00135 family.	0.00117006
NZ_CP053452.1\|WP_171470121.1\|1736045_1740245_-\|hypothetical-protein	gnl\|CDD\|275380	sd00033, LRR_RI, leucine-rich repeats, ribonuclease inhibitor (RI)-like subfamily. A leucine-rich repeat (LRR) is a structural protein motif of 20-30 amino acids that is unusually rich in the hydrophobic amino acid leucine. The conserved eleven-residue sequence motif (LxxLxLxxN/CxL) within the LRRs corresponds to the beta-strand and adjacent loop regions, whereas the remaining parts of the repeats are variable. LRRs fold together to form a solenoid protein domain, termed leucine-rich repeat domain. Leucine-rich repeats are usually involved in protein-protein interactions.	9.09451e-25
NZ_CP053452.1\|WP_171470114.1\|1724109_1726107_+\|hypothetical-protein	gnl\|CDD\|366129	pfam00493, MCM, MCM2/3/5 family.	0.00240935
NZ_CP053452.1\|WP_171470122.1\|1740422_1743917_+\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|238121	cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment.	2.17542e-32
NZ_CP053452.1\|WP_171470112.1\|1721431_1722931_-\|MFS-transporter	gnl\|CDD\|340877	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily. This family is composed of predominantly bacterial transporters for hexuronate (ExuT), glucarate (GudP), galactarate (GarP), and galactonate (DgoT). They mediate the uptake of these compounds into the cell. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.93431e-58
NZ_CP053452.1\|WP_171470126.1\|1749566_1751582_+\|PAS-domain-S-box-protein	gnl\|CDD\|237425	PRK13557, PRK13557, histidine kinase; Provisional.	4.66185e-116
NZ_CP053452.1\|WP_171470116.1\|1727462_1728329_+\|branched-chain-amino-acid-aminotransferase	gnl\|CDD\|181025	PRK07544, PRK07544, branched-chain amino acid aminotransferase; Validated.	3.99293e-159

>NZ_CP053452.1|WP_171470117.1|1728416_1729229_+|sugar-phosphate-isomerase/epimerase
MKSAVTISLVPEARGGPFVYWDDLAAGCRAAAALGFDAVEVFPPGPDAVSPDDLRALLDDNGLALAAVGTGAGWVKHKLSLTSPDDATRDRAVAFVRSVMDLAARFEAPAIIGSMQGKWEGAVSKPVALRYLGHALFKLDQHAADLGTTLLYEPLNRYETNLVNTLGDAAQLLTGASLEHVKILADLYHMNIEEANLPGAIRAAGRHIGHVHFADSNRRAAGLGHTDFAPIVAALADVGYSGYLSAEVLPLPDTDAAARQTIDTFRRLVG
>NZ_CP053452.1|WP_171470116.1|1727462_1728329_+|branched-chain-amino-acid-aminotransferase
MAAPALPMDDRDGVIWLNGHLVPWREAKVHVLVHSLHYGNSVFEGERIYGGKVFKLTEHSQRLHKSANMLAYELPFSVAELDAATKLVVAENKLDSGYVRPLAWRGPEVIGVSAIGTKVHVAIAAFPWGAYYGQRAIKLITSRWKRPSPESSPAGSKAAGLYIICTLAKDEALAAGAQDALMHDYKGRLSEATGANLFLVLNGELHTPTTETILNGITRQTVMDLARTRGIKVVEREIWPDELARASEVFLTGTAVEVQPVAAIDKLTFEVGPITQQMIADYSAAVRS
>NZ_CP053452.1|WP_171470115.1|1726119_1727367_+|hypothetical-protein
MTDQPITIELLNPTPVAFVGEPLPLRLVIRCPDQGRPTTLRTIRSRNTQIAELDADIFERDTPIGPGDVYRCTVVALFRTTGHIADPLFVVLAGVDADARVVPVPTPPMRVVPSLRGELRASAESICTYDTGTKVDVTLAHAGPTRFDNFRLAIGPVDSVRAGVSDQYRPTFAKGEQIKFSTVVSAERLSLELDAFVAGERIGPVSVPLAIPKVKDVDAAALFRFLEPKKLTRADVRVFTLDEDRTDVRPLAGLFPVYGGGNKYRVEIKPAHPHTQGVKLRGASGVVEVSDMPPDAGIWSFQMVVVSNAVFTTSATLHFDVVTPDGPQQGELNLSIRPQNGKLWIVAVTAGAAVTVKGMAAVVPTVLNPGDLWTTLQTAMLKIETAWDLLQLVSIPVIRVGLWLADQLIRPFQDD
>NZ_CP053452.1|WP_171470114.1|1724109_1726107_+|hypothetical-protein
MSTPPDTSPELCRLSLLREFKLRRLHRSGDTSSPFADRIVTAHNDRGLIDLCELHGEVRDAIAQQIEGVHTNRRSQVVLLSGDAGTGKSHILRYFAQPAVAEQQGYVCVGGSNDWKVNEFQPCLLDWMITALTLPAPSEDHTLLERVRAIGFRAVEQLLENRTALKRCTAKGRRRFFGLLSGQRASYETIQQLTHERDPAVFRLLDFTKFGEEVCTRFLAESSNPVHRYAMRVLLTYLFPDAVEMGMGTRDRVLNWFRRRPDDGYWLKRLGVSDDLDRRYAVADAIRLLVHLFSPDLSHRLSVPGDEHRSLVFLLVFDQAEGRDELFDSLEDWNRFFAHLSELYNTLPNVLVLFTMTLHLRNELHPRMERQFKDRIRKDERFVLRQPAPVEIQSLYRARLAAWLADDPIQQEHFAALPADEQYLPFGPEQVVEIGGTQSLRAALEQFDLRFKEALEALVIEPGYDFEYVLQEQQALIQSQSEWDYTADHLDEVWELLEPLVELLAVEYGGVQLIKIEDDAADNVRVLKLTFEDPAFSGTWVCVYLARFASQYKAQIQKCAELLRGKQTARYSVWMVRAREMDAEFPKPDQMFGGLIDTDTEARLWAVKHLLDKRAEYETNRTWPDAWKLIRDEIGKSYLGAMFAHARDRVNAKKASVLSDESVAT
>NZ_CP053452.1|WP_171470113.1|1723141_1724110_+|hypothetical-protein
MSEVPVLDPAQRDAVRSAVLAAAVTPQKRADLVKAAKAVVTAKKDKEKKAVAEGVIDEMIQAGELHKQSAAATAPIGITKPPLKNDPEKVRAALLASAETPQTLAKLITAAVAATKADKAFVTDEANKLISSEQLHKHSTAAKPPYGAKKKEAPHALDIAPGKAAFAGLLKAAKKVTNVAPGVSLDEVIQRLRAALANEVARPVPVVAAPPPVAPPLAHPEPAPVAAPITPEQIRSGLRAAYDELCLFPEFEDKLVEIRRLYHTAARLLPGLTVPQFHHELEHLQGLRQLELHSLNEVQQAKEPELAIRHNDRLLYYVMWGK
>NZ_CP053452.1|WP_171470112.1|1721431_1722931_-|MFS-transporter
MPQRYVIVAITAVAALWMYIDRVCFATLSEPMKVELLLPLAPEPDEPPGAFQRVVRWFLSDALSDDDLAAAKKMKRKSLGDGAPAGAGELTDAEVTAAKKRKWADTRMSFALGAFFLTYALFQIPMGTLADRYGARRVLALSIAAWSLVTMATGFVLGFAALLGIRLLLGVTEAGAYPAAAGLVKRWAPPSRRGLCSSVVALGGRIGGVIAPWLTALLAVGLVGAALVEWAVTPDAVPPEPGETPTNWRGVFVVYGACGLAVAALFWLVVRDRPPGTEAEADTGRSAAPAELTLVQRIGLLARTRNMWCFGGVQFGVNMGWAFIVTLLPTYLKQEFGTPVETVGPMQTVALAIGACGMICGGAFTDLARARLGPKYGRSVPIVVALSGGALVFFVVPTLPTAWAAVVALGVMAFLVDMHNPSLWSFAQDVGGKNVGAALGWGNMWGNLGAAVSPVLLNAVRQSAGWNAAFLCCGVAFTCAAVCGLVLDATKPVDEPPLA
>NZ_CP053452.1|WP_171470111.1|1720456_1720825_-|hypothetical-protein
MLFDPDADELSLFRLGEKGYSADLPNAAGRRPIPELELEIALLDGWVRYWFRGELLPLLGDLLRQLNATRDELAAAATALTAAKTELTAARSELDAERQARAALEAELARLRAGAKPGTAQP
>NZ_CP053452.1|WP_171470110.1|1719121_1720456_+|serine/threonine-protein-kinase
MLSPVTDAPTTRDTFLEAVRAADVLTPSQQTKARALAPPGPADSTADALVAAGLLTRFQADRLLSGRTDGFLLGPYTVLEQIGRGTLSRVYKAKHRTMNRPVAIKVLAAALTRTRAEREAFQREVRAAGKLAHPNIVTAVDAGDLHDRCYLVLEFVDGPNLEALVRQRGPLPVAQACEFVRQTAAGLHHAHEKGLVHRDLKPTNLMVVRPTPSAPLTVKIADFGVPKDGTEPTAYSAPELSEAAAAPAAPRADLYALGGVFYFLLTGRPPEGDGTVPLSQCRPDVPPEVAAIVHRLLERSPALRVGSAEELLYDLDAVCVPVAVPLDGAVDFDAPAPLPYPGQDTGYLTGRNAIPTDVVHPLPGSGAYSLSDAVPSPWEQITNESDGDTMPLEPDATPTPRTMRRPKPTGRGESVPLWVTASLLVSIVLVCLMSIGAIAKMLLK
>NZ_CP053452.1|WP_171470109.1|1715473_1717993_-|DUF1553-domain-containing-protein
MQSAMTHVTPSVCARKVGFFLALFAAAAPATGVAAPPSEADERKVVIGQPAGVEVVPQAVTLRGARDARQLVVTGKYADGSARDLTAVVEARVEPAGVVDLQDGLYLRPVKNGTATVVVTANGGVTRVPVTVTGMDKPSPVSFRRDLIAAMNVGGCNAGACHGTPSGKNGFKLSLRGFDPAADFLQLTREQFGRRTDKHDPEASLLFLKGIGRVPHEGGQRFGATSVPGEMTLAWLAEGLRDDAPTLPPVKRLDVAPGARILKTPARWQQLSVVANFADNTSRDVTRLTVFSSSDPSIADVTPGGLVEFKRAGEIAVLVRYLEEMVSVRLTYLEPRDGFAWPNPPETNFVDTLVFAKLKQMSITPSGLSEDHEFVRRAYLDCIGRMPTADEAKAFLADKAAKKRETLIDALVDTPEFADFWALKWADVLRSSRKTIQVKGSYGMQAWLRGHFLKNTPMDKIVQEIITSNGNSYANPPANYYRIAKDPTALAETTAQLFLGVRMQCAKCHNHPFERWSQDDYYGMAAWFARVRTKPEPGGPKPQGGAEVVFTARDGEVNQPRTGKQMKPRYIGTGDADVKPGEDRRAVLAAWLTAPENAFFSKSVANRVWFHLMGKGIVDPVDDFRESNPSCNDELLDALAKDFAKNKFDMKRLVKTVMKSRTYQLSAQPNDFNRDDNKYFSHTVTKLLTAEQLLDAICDFTAVPEKFAGLPAGTRATQLPDGEVNHPFLKAFGQPARELACECERESDGNLAQALQLINGPTVNEKVRNPNNRLGRLLAAKKTDAEILTDLYFAALGRAPFDDEKQIALDHVAKREDKRKAWEDVAWALINTREFLFRH
>NZ_CP053452.1|WP_171470108.1|1713867_1715349_-|enterochelin-esterase
MRRSLAVLALLVFAHHAPAAEPKPLEFKLTFDKAAFDKPFTGRVYVTIRPTPASPPAGLNWFKPEPGLARDVKDWKPGEPLVLDAKAIAYPAPLADLKPGKYHVSAVMDRDLGGIDFLASPGNVYAKPLPVELDPKSSGTIELKLDQVVKPREFKETDAVKLVDIESKLLTQFHRTPMRVRAGVVLPPSFGKEPNRKYAVVYEVTGFGGNHFGAVGAAARKAWAVGDAEMIWVVLDANCRLGHHVFADSANNGPVGTALVEELVPHIEKAYRGSGVRFTTGHSSGGWSSLWLQVAYPDTFSGCWSTAPDPVDFRDFQLIDIYAKGANAFTDAAGSPRPLARRDGKPALFFQPFSDMEEYMNRGGQLGSFEAVFSPRGPDGKPQRLWNRKTGAIDAAVAKAWESYDIRLVLERNWETLGPKLAGKIHVYMGEDDTFYLDGATRLLKASLATLKSDAVVELFPKRHHGNLVDAALRKRMNEEMAAALHAREKTGP
>NZ_CP053452.1|WP_171470119.1|1730998_1733833_+|hypothetical-protein
MPEEARGLLNSIDAERFARKQRTAAEAVKNAKAAFEQKDYQRTLSVLVMIDPNLLTPEAKGTRDQLLATCKVELGKSGPGGDVVATGGAQPDKSLLPPADPAPPNPPGVARVGPDAKTDGPAAQADALRRVEVQKLRSEGLKVQQDAGAAFGRGETDLAMQLLMDYSNRVRSSGLDAAAIAQLLRPVEGRLDTFRIMKGQQDALTRQTKEKREAREQLTTRGVVEEERKQEVAALVRRYHDLVKKNDFAGAERVALQAKQLDPDDPAVTALAEMAKLQKRVKYAEKAKSDREQIFLDGLNNAEEMGPLVTTEDPVAIQLRSLARSRNRGSLDNAHLRTRTPAEFDIELKLDKPISIEFTQTPLDQVIDNLKVSTGLPLVIDYRALDDEKISQVQPITIKPGTAVAAKNVLAFALEQAGLSYVVEHDMVKVTTLKKSKGRLVTKVFSVADLVTPVPNFALPDYANFDKMLKSNPLNSGQIMLQGLNTPGSTTPNVPPNGLTGGQGVSNPLPAAALGQGAMPGIQGQHWTGGRLETHPLNSSSTMTSENNTKQEQLIRLITSMVRPYAWDGHGGAGKVEFFDIGNALVVNQTADVIQEVADLLEALRRLQDLAVAVEVRIVSLSESFFERMGVDFSINIQTHNTSLEPALTSGNSRQSPFINSLNGYNGYTVGLTPAGTFTPDLNVPIQSTSFSRAIPGFGNYPNTPGNDGGISLGLAFLNDIQVYTFMEMAQGDQRANIMQAPKLTLFNGQTATLTVTNTQFFVTNVQVVSVNGQIVFIPQNQALPGPGNFNQGGSTTISIQAVVSADRRFVRLNLPVNLSVQSGASVPLFPITTFITPVFEGGSQGQPIPFTQFLQQPAFTTMNIQTTVVCPDGGTVLLGGLKTLRESRNEFGPPFLSKIPYLNRLFKNVGVGRDTTHVMIMVTPRIIINSEEEIVQTEGGLRP
>NZ_CP053452.1|WP_171470120.1|1734153_1735872_+|RNA-polymerase-sigma-factor
MGTSSRGLFGFLARLRPPPPVDSDADLLGRYVNTADQLAFTGLVRRHGPMVLAVCRRRLGRGADAEDAFQAVFLARARSAHAIARRERCPAGSTGRRTRSHSRRPGAGAGRPTTELATEVPMPAAPPAWETDELKAALDAEVADLPDRFRSVVVLCLVEARPRAEAAAVLGVPVGTVDSRLNAARKRLQARLTRRGIAIGLGAALDPMLCEPAAATGGRVLELITSTVSAVLAEAAGSETGAVSPAVVELSRGVTMTTTKLRLLAALGVTLGLIGGAGAGIYFATAADPVPPVTRVTETPTTATEQPKAGAPDRPDAKAEPRASGEAALLKPFGKEVGDGTNLRDLFAYIENQTQLVLRVDVAAFQRIGVISRGDADTPDLFLNAVYATKVVLPRRVELLPTRDVLADALAQIQSSHPCTYQVRGSQLVIVPAFIPPVRPGVDPLGPGDADGNTPSITERILSEQIYGGVVRVTVDRKPATEILADLRAQTGANIVLDPRCEALDKKVLTVTLSDVRLYDALRVLADMADLKMVCVGNIYYITTAANAKAFQPPAPRPAVPMAPQPPSVGGK
>NZ_CP053452.1|WP_171470121.1|1736045_1740245_-|hypothetical-protein
MAVSVICDHCRQELKVPERALGKRGRCSLCGKIFTATRPPADPAELPIADEADPLAEPAPTETEGPPSEPRPAKRRTVRPASQSLLRLTTLFGGLLGAACCGFLFHLWQRADTELGPLMGFARMLVEGGARDPQFANELAAIEQFERHRTAYPYMLLAAFAGAVGGLMGALRVGVLGGLVMLAGAAAPAIVLPKTLLFTAPLIVAGLLGFMVQSQARANRNAELASAGPRKRIRLQHPLVVLAAVLGLLALIPYAALMVYVLRTAADNQEKEIAKLRGNRDNKPAPPAPAAPRAAAGPAPRPEAVGNVGAGTKPPEKPKGPPVGSLRDQIAAAGAGVKLVKLDLSPAGLDATLDAPEGCQITESYGTVRVTKDEHFGLSIVLGRASIASARANLSNNESLADTADLVFMKNKWGDKPDYRFTVSKVVGHQDVSVENDRQVKDKSVEHDRAYCLLMIRCAESLARKTPLPTDPTAALAPFKAEPRSEAGGEAKDSIRLGAKATDATLALLAKFPDTRALDLSNTRVTDDGIAHLKALPRLETLNLYGRGLTDATIVHLAGLRHLKELDLTGAQITDDGLTAVAGLSELETLNLGSSWTSKLKGPGLAALAKAKKLKTLRLRGQDFDDTVLAHLKGLTGLVEIDLGGTKILGPGLTQLNGLPRLARLNIGNTKINDAGLAGAAGLVRLEELDLSHTQLTGPGLVHLKGMAGLKVLKLDSDKVTDAGVAHLAGLTALEVLNLNGTLVTDAAAAHLKGLKNLRALNLSQTALTDAGLKELDALEDLDELVLWGSKVSNAYRLKKLKPPVAGKLKPADPRAMVKRLNGKLTEGEGGDKPIVSVVFDEGKLTDADLADLRELKDLRVLNLGFGNAVTDAGLFYLKGLTNLEELHLSGTAVRGDGLMYLAKLTKLKRLYLPGSDLTAKQLAPLAALVDLEDFPCNLNGEAAAKLQVLSHLTKLRHLDLPGRGLTDPALEHIGKMAGLRALFVPASGEWRLTDAGLAHFKGLKNLKVLSLPGAAVSGTGFKHLAGLTQLEELRLDGAPFGDEGLKEVRALTGLRALSLVRTNVTDAGLEHLGALTELRELHLGSTRVTGTGFEKLKALPNLEELSVEGAPFSDAGVKHLRAALPGLNDLVLDGTDVTDAGLEHLKGMNQLGRLSLVRTRVTGTGFAAVGELPALADLRATGSAFTDAGAGHLAGMKRLQTLDLSDTPVTGAGFAKLKGLKALRSLLLQGSQLNDAGLKEVGELTDLGVLALGRTRITDAGLPALNGLTRLQHLALEGTRVTGAGLKDVTALAKVSSINLSQTRATGEGLEHLKNFPELTNLYLEQTLVWDGGLARMKDLPKLQFVNVQGTRITDAGLAGLAGLKALQTVNANQTQVTGAGAEKLRGALPNVRVFADD
>NZ_CP053452.1|WP_171470122.1|1740422_1743917_+|sigma-70-family-RNA-polymerase-sigma-factor
MTMRTALRLVRGANEPPDGTDSELLRRFTESGDEAAFAAVFDRHAGMVLGVCKRALADPRDAEDACQATFLVLARKARTGRWHTSVANWLHATARRVARNVRVTSARRVRREAAAAVPEAVPAVDRMSARELLEALDDELARLPARYREPLVLCHLEGLTRDQAARRLGLRPGTVKIRLERGRRRLAAALTARGTTPVPSCSRRPSLRPRRPRSRLSGPTLAAVGGRPSATVAALADGVSSTGTVFGLAGLAFGIIVIALGLLLGSVNGSNPAPDLPKKAEPAAPVAAATDAFGDPLPPGAVARLGTVRFRFGMWPWYVVPSPDGSKLATFGANGQHVESMTISDATSGRPLRTVALAGARVQSAQWLPDGRGFAVLQTNTTDYAVWEFTDEKAAPPTYTGLKEMRAITNGIFVASTVSPNGKLVAGASQAGDEGTAGRLEVWALVPGGKVRAAAARHTIDTPDGFVWLGFTPDSKRLVGVTRHREPNRPGAAAGPGQPVPVVPGAKADTARVVVWDAATGKELLAIKTPGGLTRAYAIAPDGATLFAAGEKGRVAAFDLATEKERFVVDAGPPEQKDDPARYVSHLVVAAGGRTLLLVENMQAVAALDAATGKSLWRNTGREAKQVYALAALPDGKRFVIGCVDGTIVFGDAATGKVIDPGPGHRGGVRAVALDGAGRVAVTSGSDATFRRWELASGREAGTVEITGLVGFHANAFSPDRRTAVGTGWQDNKGVVVLADVATGRTLTRLKGDTHSLFEATMFGGQPAAWVPDGSVILTDADCGVRFGPDGKEVRTYSTKEINAGSDAYSVAVSRDGRRVALVGRGPRGVHPVTGWVAVFDAATGKLIRAAQTPQTLASVAFAPDGTVLVSGSVYPPSQRLGVPPAEAGTAAAVGLFDPSGGKMHYPFADPTDGTTFRQAAVLCVSPTGYQIAVAEHDDSITVYERASGAVRRRLRGHVNQVYQLAFTPDGARLVSVSWDGTGLVWDAAPPRPATPPVATDAERLKWWEGLLAADGPTAHRTMGELAADPAGTVSLLKAKLNSKPPTDAEIDKPISGLGAEAFADREAASRALERFGAAAVPRVKARLSGVESAEVRRRLGEFLARHDRPDRLTGTRLRERRAVELLEVMATADARSLLDELARSGSHPLAEDAATAAARLRAR
>NZ_CP053452.1|WP_171470123.1|1744407_1744941_+|hypothetical-protein
MHRFSTVPAALIGLTTIFAVGALAAPARTHAVGWDLWHFADEWTSFRDAETAAQDLDFGLEQARRREVVCDDIAISLCEDRITLDEAIKDIGAFADSSPDWIVQLRAVYSGRGDVAPTATDREVLARYLRARIKSLIGTAEAVGDTARATALSARLTRFDREAREHPGSAPAPQTRR
>NZ_CP053452.1|WP_171470124.1|1745053_1747108_+|PQQ-binding-like-beta-propeller-repeat-protein
MTARHWLPALGAAALIATAATADDPKGASGDPLPQGAKVRLGSTRMRVPTGWYSFALAADGRSLVTLSERGKVIAIDVTTGAVNGGPVPFVRPVRMELSADGTRGVTTGYGGPVVYDLATGTVKAKIDFVVPFGESSGLLSADGKVLALGGGKGANQKVRALVWDVEKNEKRAEVEVLQNQAANAVISGDGTVLATWGNHFKEFKPGAEPKPEEDHSRVAQFWDAASGAERGRYRVSGYAVSTVALAPDGKTAVVGSGDGGVYLVDTTNGALLRRLFGRSDQGNRVAFSKDGKRVAVGGADGTVQIYDPATGARVSRTGCPVGPLPYGGVRELKFTGAGTVTAWAVVNAAAVVWEVPSGRLLSPTGGHTGAVDSVAFTADGKTVLTAGNGAVLRWDPATGKQTGAVRLRAPGRAGDADALGARFGPGALTIRTGGSAPAVYETESGDQLFALRGPGDYNSESILCTDGRTLLVATRPGGPAPKAEPAAMRVPVWDTTTGIKLAELEPRFGTLVAAGTSPDRKTVVTLVGVRVGDTFKTDHFVTGWDLATGKNLGEVPVAPAPGQHVLVPAPDNTAALVATESGKLAVVDFVAGKVVREIDTERQVPTAVSPFSPDGKWFAVGSGSSGFGPKPAVRVYDWKSGKVVRTFRGHDTGIQSLAFSPDGKALASGSLDTTVLLWDISEK
>NZ_CP053452.1|WP_171475980.1|1747239_1747515_-|DUF1508-domain-containing-protein
MVLAVGFSVAPAQDKKGDAKKDAKAAEKVGTVEIYKDRSGEFRFRVKDVDGKVVAMPPKGYDTKEECQKVLDLIKVTLNTAKVTEVKDDKK
>NZ_CP053452.1|WP_171470125.1|1748022_1749633_+|PAS-domain-S-box-protein
MLDVLEPLFDSSGFTPRWQCGAWAPALGWLHILSDLGVWSAYMAIPAGLGFFVLRRKDVPFRRILILFTAFILACGTTHLMEAVTFWWPAYRLAAALKLATAVISWVTVVALVGVVPRMLAMRAPEELEKEIVARRAAEAELVGANAALERRVRERTEELTRANAALHTERERFRTTLSSIGDAVIATDLAGRVTFLNPVAESQTGWSAQGAVGQDLRTVFHIVNETTRTSVENPAARALREGIVVGLANHTVLIARDGSERPIDDSAAPIRDGTGGVAGAVLVFRDISERRLAEAQIRESEERYRMLFEANPHPMWVYDRETLGFLAVNNAATAKYGYTRDEFLGLTLKDIRPPEDVPALLASIAADTGGLDEAGVWRHRLKDGRVVHVRIVSHTLTFAGRAAEVVLSQDVTDQLRAETALRHSEERFRAFMDHSPAAAWITDADGRVVYHSASYPRTFQLPAGEIVGRPVEDLYPPDLAEAYLRTTRAVAAGGAAATAAASGSAPTARPASSWCTSSRCRGRTAGRRWAGWPLT
>NZ_CP053452.1|WP_171470126.1|1749566_1751582_+|PAS-domain-S-box-protein
MYKFPLPGPDGRTQVGGVAVDVTEARAAEAALRASEERLLLALSAGNMGTFDWHIPTGRLVWSRAHYELFGYDGAAPFPVEYHHFIDRVHPADRPAVEAAIGAARRNRSLYTHEYRVRALGGTERWVADTGRFSYGPAGAAVRMLGVVQDVTARKAAELALRESERVLRQVIDTDPNYIVLKDRDGRFTLANRAMADAYGTTPEEMVGRTDADFHPVPSEVAAYRAADRAVLDTGTEYHSPEEPFTTAGGRRLWLRTTKRPLIGADGRRVAVLMVALDVTAQKRLEDQVRQAQKLEAVGQLAGGVAHDFNNLLTVVNGCGELLLTDMAADAAPRPLVEDIVRAGQRGAALTRQLLAFSRQQMLRVEVFDPNRVLEETAKLLARLLGEDVTVRTVLDPAAGFVRADVGQVEQVVINLAVNGRDAMPRGGALVIETAPVDVAAADLPASTDARPGRYVRLAVADTGTGMPPEVQAHLFEPFFTTKPPGKGTGLGLATVYGIVRQSGGFLTVRTEVGRGTTVAVHLPRHEPEPAAPKSAPRPKPRATGHETVLVVEDEETVRALTTAVLARQGYRVEAAESGAEALALCERLRTQPDLVLTDVVMPGMSGRELAEALTARFPQLKVVFLSGYTADAVLRHGVEEERVAFLQKPYTPDALARFVREVLDGPGGPA
>NZ_CP053452.1|WP_171470127.1|1751772_1752591_+|hypothetical-protein
MSKTKLGYVLVAAVLLTSLGGYALGQFQLKPSPKAAAVAPPGATFTTPLTVPPTAIEALVPLKAEEPKAARAEETKPTTGRRREAVIKLPVGTFVKDMDVGQYGSGRLTWTFEDDKVYGTIEANVMGVEVELKTEAEFSMSSSGTIYGIVTGFELTHVKIAAGGELGEIAEYAKFAKLAEPLINEMLTDLPFSYQFRLSGDKLTILNYRALLAGPNPLGKIGGVIGGGDNGLAVLSGFQAFAVAIEGTYTAGETDSRDKPKTKPVIRKPSKK

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Crispr_ID: NZ_CP053452_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053452_8

1830542-1830642

Orphan

Consensus_repeat	Method
AGAGGATCGCCTCCCGGAGCCGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP053452_8

>merge|NZ_CP053452|8|1830542-1830642|CRISPRCasFinder
AGAGGATCGCCTCCCGGAGCCGGCCGTCCTCGAGTTTGACCGTTGGGATCGGGCACTCCCACCCGCCCCCCGCCCGGAGCAGGATCGCCTCCCGGAGCCGG

>NZ_CP053452|8|8|1830542-1830642|CRISPRCasFinder
AGAGGATCGCCTCCCGGAGCCGG	CCGTCCTCGAGTTTGACCGTTGGGATCGGGCACTCCCACCCGCCCCCCGCCCGGA
GCAGGATCGCCTCCCGGAGCCGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053452.1\|WP_171470180.1\|1832585_1833680_-\|GAF-domain-containing-protein	unknown	unknown	gnl\|CDD\|270916
NZ_CP053452.1\|WP_171475983.1\|1826399_1827653_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133055
NZ_CP053452.1\|WP_171470182.1\|1835170_1835533_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236138
NZ_CP053452.1\|WP_171470177.1\|1823963_1825736_+\|PD40-domain-containing-protein	unknown	unknown	gnl\|CDD\|238121
NZ_CP053452.1\|WP_171470174.1\|1818210_1818651_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171470184.1\|1836436_1837129_-\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|99749
NZ_CP053452.1\|WP_171470176.1\|1821077_1822625_+\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274357
NZ_CP053452.1\|WP_171470175.1\|1818920_1820852_+\|DUF1549-domain-containing-protein	unknown	unknown	gnl\|CDD\|377872
NZ_CP053452.1\|WP_171469115.1\|1841050_1841431_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171470181.1\|1833768_1835223_-\|transcription-termination-factor-Rho	unknown	unknown	gnl\|CDD\|236490
NZ_CP053452.1\|WP_171470186.1\|1840448_1840847_-\|RidA-family-protein	unknown	unknown	gnl\|CDD\|100011
NZ_CP053452.1\|WP_171468988.1\|1822660_1823335_-\|transposase	unknown	unknown	gnl\|CDD\|315923
NZ_CP053452.1\|WP_171470171.1\|1813777_1816417_-\|phosphate-ABC-transporter-substrate-binding-protein-PstS	unknown	unknown	gnl\|CDD\|273374
NZ_CP053452.1\|WP_171468987.1\|1823382_1823904_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|379267
NZ_CP053452.1\|WP_171468847.1\|1832104_1832437_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|270916
NZ_CP053452.1\|WP_171470185.1\|1837181_1840091_-\|DNA-polymerase-I	unknown	unknown	gnl\|CDD\|273160
NZ_CP053452.1\|WP_171470173.1\|1817091_1817703_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171470179.1\|1831527_1831992_-\|6,7-dimethyl-8-ribityllumazine-synthase	unknown	unknown	gnl\|CDD\|234606
NZ_CP053452.1\|WP_171470172.1\|1816726_1816969_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171470183.1\|1835783_1836440_-\|dephospho-CoA-kinase	unknown	unknown	gnl\|CDD\|234620

Protein	Function_ID	Function_description	E-value
NZ_CP053452.1\|WP_171470180.1\|1832585_1833680_-\|GAF-domain-containing-protein	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	9.32727e-28
NZ_CP053452.1\|WP_171475983.1\|1826399_1827653_+\|glycosyltransferase	gnl\|CDD\|133055	cd06433, GT_2_WfgS_like, WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.	4.47967e-83
NZ_CP053452.1\|WP_171470182.1\|1835170_1835533_-\|hypothetical-protein	gnl\|CDD\|236138	PRK07994, PRK07994, DNA polymerase III subunits gamma and tau; Validated.	5.75746e-05
NZ_CP053452.1\|WP_171470177.1\|1823963_1825736_+\|PD40-domain-containing-protein	gnl\|CDD\|238121	cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment.	1.26396e-58
NZ_CP053452.1\|WP_171470184.1\|1836436_1837129_-\|Uma2-family-endonuclease	gnl\|CDD\|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	5.26048e-20
NZ_CP053452.1\|WP_171470176.1\|1821077_1822625_+\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	7.10985e-26
NZ_CP053452.1\|WP_171470175.1\|1818920_1820852_+\|DUF1549-domain-containing-protein	gnl\|CDD\|377872	pfam07583, PSCyt2, Protein of unknown function (DUF1549). A family of paralogues in the planctomyces.	2.73413e-35
NZ_CP053452.1\|WP_171470186.1\|1840448_1840847_-\|RidA-family-protein	gnl\|CDD\|100011	cd06154, YjgF_YER057c_UK114_like_6, This group of proteins belong to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function. The conserved domain is similar in structure to chorismate mutase but there is no sequence similarity and no functional connection. Members of this family have been implicated in isoleucine (Yeo7, Ibm1, aldR) and purine (YjgF) biosynthesis, as well as threonine anaerobic degradation (tdcF) and mitochondrial DNA maintenance (Ibm1). This domain homotrimerizes forming a distinct intersubunit cavity that may serve as a small molecule binding site.	2.33617e-60
NZ_CP053452.1\|WP_171468988.1\|1822660_1823335_-\|transposase	gnl\|CDD\|315923	pfam13358, DDE_3, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	3.44493e-23
NZ_CP053452.1\|WP_171470171.1\|1813777_1816417_-\|phosphate-ABC-transporter-substrate-binding-protein-PstS	gnl\|CDD\|273374	TIGR00975, precursor_PBP-3_PstS-3_Antigen_Ag88., phosphate ABC transporter, phosphate-binding protein. This family represents one type of (periplasmic, in Gram-negative bacteria) phosphate-binding protein found in phosphate ABC (ATP-binding cassette) transporters. This protein is accompanied, generally in the same operon, by an ATP binding protein and (usually) two permease proteins. [Transport and binding proteins, Anions].	1.4536e-100
NZ_CP053452.1\|WP_171468987.1\|1823382_1823904_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|379267	pfam13565, HTH_32, Homeodomain-like domain.	8.03892e-07
NZ_CP053452.1\|WP_171470185.1\|1837181_1840091_-\|DNA-polymerase-I	gnl\|CDD\|273160	TIGR00593, DNA_polymerase_I, DNA polymerase I. All proteins in this family for which functions are known are DNA polymerases Many also have an exonuclease motif. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP053452.1\|WP_171468847.1\|1832104_1832437_-\|hypothetical-protein	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	4.31303e-15
NZ_CP053452.1\|WP_171470179.1\|1831527_1831992_-\|6,7-dimethyl-8-ribityllumazine-synthase	gnl\|CDD\|234606	PRK00061, ribH, 6,7-dimethyl-8-ribityllumazine synthase; Provisional.	4.28953e-76
NZ_CP053452.1\|WP_171470181.1\|1833768_1835223_-\|transcription-termination-factor-Rho	gnl\|CDD\|236490	PRK09376, rho, transcription termination factor Rho; Provisional.	0
NZ_CP053452.1\|WP_171470183.1\|1835783_1836440_-\|dephospho-CoA-kinase	gnl\|CDD\|234620	PRK00081, coaE, dephospho-CoA kinase; Reviewed.	1.35855e-60

>NZ_CP053452.1|WP_171475983.1|1826399_1827653_+|glycosyltransferase
MRVSTPPLVSIVTPSFNQGAFVRQTIDSVLAQDYPHIDYRVVDGGSTDETVAVLKSYGTRVRWVSEKDRGQAHAINKGMAEARGEIRAYLNSDDLLRPGAVRRVVEHFQTRPACDLVYGRDAFIDAAGAYVGMYPTADYSFAALADGCCISQPATFWRKRLADRIGPFDESLHLVMDYDYWLRADRAGGTLEHIPDVLAHTRLHRQTKTSGGGAPAAFQARYHREVFAVCLRHAGFVSSRYVYGWLLAAVFNAHPWTWRYEEPITRIVQTWYQNRYRRGKKRWRAALSVVYNERQYVLPFLRRQVAALNPRGWVRTAPARVDLADDLWLGPEFALAHAGGPVRLAGVPARASVMRVYRAGTEIAAVELRAHEPADVCVEADAGPLRITFSDSEPLPDGRRVSFKLHGTTLFTERAVA
>NZ_CP053452.1|WP_171470177.1|1823963_1825736_+|PD40-domain-containing-protein
MMEGQFSQRDLAREDRKTKKVRLWDVDEGKERPQLADQPEMLWQSLVFSPDGKTLVGMSHPVTIRIWDVSTGKKLRDIQAHDYQVFHLAFTGDGKRLYAADGHGVSIWDPTTGKPLDDVGGHRYTIDDAAWSPDGKRLASGAGYTDNVARVWDPATGRKLFDLVGHKSGIEQVAYNPAGSLLATGSQDGTARLWDAATGKELHAFAAKDGMVYAMTFTPDGRFLVTGGRTALHVWDVAGRKEARSIPHTGDLLLQIAFLRDGKRILVGDYKNGNRVIDFATGREEVRLAAAKRPGEGAFSVAVSPGNDRVALADPDGTVRLVDAGTGREVCVLAGPVTDHPDGRNALGLAFSPDGRTVAVAYRLGEVRVYEVATGSERFRFVGHTNAPTGVRFSPDGGRLCSFAGDHTLLIWDVTGARLSPAPAPTSANAAWADLLAPDAKKGFAAIRYLAADPPAAVRFVTAGVKPAAPVDPQVVAGLIEKLGSAEFAERERASKELAALAPAVPDQLRAAVGKSDSQEVRARLGAIVSRVSETKLSGEGLRAVRAVEVLEQIGTPDAQKVLAELAAGAPGSALTQNATAALGRLKLKK
>NZ_CP053452.1|WP_171468987.1|1823382_1823904_-|helix-turn-helix-domain-containing-protein
MPGKAAKVVITERQQEILQRWVRSRSCPRGLAQRAEIILLAFDRLQNGPIANHLGCERHAVGIWRRRWAAAFDTLVRIECLEGLSTLERAIEDVLSDNPRSGCPGTFAPDQIARIIAVACEPPEDSGRPVTHWTPTALAEEVVARRIVPSISVRHVGRLLKVPNSSPIGVGIG
>NZ_CP053452.1|WP_171468988.1|1822660_1823335_-|transposase
MCDCYQAAPTGLKSGVHTVCVDEMTGVQAKERIAPTKPMRPGQVEKVEFEYKRHGTQCLIGNFEVATGQVIAPTVQATRGEKDFATHIERTVATDPQAGWIFVADNLTTHTSATLVLWVASLCGVAAESLGQKGKSGVLKSVATRKAFLTDPRHRVRFVYVPKHTSWLNQVEIWFSVLARRVVRRGNFRSVADLREKILAYIAYHNRTRAKPYKWTYTGRPLNV
>NZ_CP053452.1|WP_171470176.1|1821077_1822625_+|sigma-70-family-RNA-polymerase-sigma-factor
MSDAVRLIQLIRVAAPTAGPAPADTDLLHRYATERDETAFTELVRRNGPLVLRTCRNVLGEAHADDAFQAVFLLLARSAARLTCTGSLTGWLHAAAVRIAQRARRGEERRRKREVARRTPAISDDLTWKEVREVLDAEIATLPERYRLPLVLCYLQEMTRGEAARQIGCPVGVLRGRLDRGRERLRRRLARYGLPLAAPVLAIGATPPVPAALAARTVRAVMTSMGSAPSALVGLVSTGIPWRMALFVPVFAALALVLAAAGQPTGAPPASDTPAPKDRTTATSAPEPATDILGDPLPPGAVARLGSARFHHGKNVTRVIVGADGNLAASEAGYGDYKLWAGDTGRSIPLWDGLTDLEQSQNRFALTSAGGQLAAVVWNANGSRLLDPVSGKTIRTLPPLKLKGLSIAEVSPDGKVVAALRWEFTAGRVVSAFRIWSAETGLWTDLDEAAGQPSHRAVLFSADSKRVTYRTVDGAVRVWDVTSARPLFQLPAIGQQISEEAMALSPDGKLLDHVG
>NZ_CP053452.1|WP_171470175.1|1818920_1820852_+|DUF1549-domain-containing-protein
MIRHSLVAGLAAGILWASAHTSAAADEPKTPGVSPQTQKINEFIAKGWESAGIKRPADRANDYEFLRRAFIDLIGRVPAVEEIYDFEQDKSPNKRVRLVQRLLNEKKYAPKGPTGKAYTEVSGLKKVPIDYSAQYASNFSELWSVWLLTRSGVDDTYREQFQLWLEEQLDNNVPYRDFVTGLITATGKSNENGAVHFVFRHLGDPIQADMKGQRVDLEKFGKYDNVPITSRVTRMFLGIQTQCTQCHDHPQAKGWVQTDFWGVNAFFRQTDKRGQQTAMGKKGAAGVANAVELVDVPDWNKEAMVLYDRRDGRRSASFAVMLKDVAQAEKEEKSTKVLTGSGAQTGKTRRQILAEWVLQHDNFEKAYVNRMWGHLFGRGLQQEPTVDDFKRENEVVHPELLQYLADQFKQYNHDSKKLLEWICTSDVYQLSHVASKEKGLTDVKYDPYFARMPLKALSPEVLFESLSLATRARSRMTDEAYKALKRTWNTRLVRNFGDDEGNEANFNGTIVQALLMMNGKDLNDQIKTEKAKGLIHDVVLKHSRGGGTSPTGVYDELFLMTVSRHPTPEEVRKLEVIRSGGAHINLGAPAPSGPPAKGPNPKGPTPKPSGANAPVAGAYANDVAFYEDVFWALLNTNEFMLNH
>NZ_CP053452.1|WP_171470174.1|1818210_1818651_-|hypothetical-protein
MDYDLKRVAEYIRSAETEELLDRVTVYREGMEPAALDLMEGELDRRGVSVAQIAAHDAKQRTGAIMLSDGTARRCSFCDRPAVQQARGWHRLRLRVPFAALFIGRGSAPLGFSVPLFPRVFAYCSFHWRPPKESPADANLPHEPGS
>NZ_CP053452.1|WP_171470173.1|1817091_1817703_+|hypothetical-protein
MPSKSVTALTIVLSVAIWEIGLRQQLVSSVTAGSGEPAAKDNAELARMYSEDQADRSPKDGKPIDWRVVGPRDKERLKKMRELYSDGKLATGADYYHAAMLLQHSDAAADFLLAHELSVVAVSKGEERAKWLAAATEDRFLTNIGRPQRFGTQYRADGPDQPYRLCKVENGVTDGLRRAYNAPTLEQAKAREAEMNEKPAKSK
>NZ_CP053452.1|WP_171470172.1|1816726_1816969_+|hypothetical-protein
MADRMSTRIRYDRIRDNGAKSRTINGSLKRKAQASRTVRMKKLINEGTFPYTPAVQSWLSVQLGIPFTQISEDQAKAAAK
>NZ_CP053452.1|WP_171470171.1|1813777_1816417_-|phosphate-ABC-transporter-substrate-binding-protein-PstS
MSTQLSAGEQLLDAALRSGLLTSLHLQPYARTAANEGAEAVANRLIADRLLTQFQAKQLLAGKVRGFFLAEKFKALALIGSGQLGAVLLCENLPDRKLAAVKMLKAEDGSGRLAALERLVREGLAAVRECPNVVRVQDLVRTSPSPLLVMDYVDGRNLQQLVAQTGPLSVQRAVHYVKQAAVVLQNIHGKRVVHKGVKPGNLILDRAGVIHVAEVGLVTIFQDLAREANPAVRDDPAAGGTADYLSPEQAGRTGVVDHRSDLYSLGATLYFLLTGQGPFETEPLARKLIGHQFRQPVPVRDIRPEVPVRLAEILSKMMAKNPADRYQSPADLVLDLGPWGQSAPAPSATELPRLLPVGYRLGLVSGPGGSEAGTGSVTDIRWSGEMNRAPAEAPVNEKSRIARRLEAEPEPDPEAEPEFEVAEEPEPEMPPAPRSRIINKAALGDNGPPTASRARLSPKSVVGGKTAAAPAAPAKASQGTRLLLLVLISLVVAVVIAGLWWIATPGSPALPTSPSKPPVVQKPEPDPVGKKDTKVEPKADPKANPGGTGGDPKVDPKVAPVSDIVITGSGSTFIKPAMDYWTRLYEEKYGIKITYSGIGSTRGVENMVDRVLDFGCTDAFMSNKQLEKARDKHGDIVHIPLALGAVVVTYNLPTVKEQVRLTGAVLAHIYLGKIKKWNDDAITASNPGITLPDLPITVIRRSDGSGTTAIWTDFLNKASPLDWGPDKVGTSITWPTGEDAEKNDGVAKAVSRKEGAVGYVELSFALERNLRFAQVKNRAEKFVQPSLENVTAAANAALQNVPPDLRFTLTDPPGEDSYPIVGMSWAIIYANQPGPKGKELVKFLRWAIHDGQSNLKALRYSPLPAKLVAKIDEKLSSIQ
>NZ_CP053452.1|WP_171470179.1|1831527_1831992_-|6,7-dimethyl-8-ribityllumazine-synthase
MLYEGDFSPPDGRFVLVAARFNGFIVDQLVAGATDAFRRHGVSDDRIDLVRVPGAYEIPLVAQRLGASGTFAAVVCLGCVIRGDTDHYDHVAGAATSGIAQAALASGVPVVFGVLTCDTLEQAIHRAGAKAGNKGFEAAVCAVEMVNLLKKLPG
>NZ_CP053452.1|WP_171468847.1|1832104_1832437_-|hypothetical-protein
MFSLGALLYELVCGTSPWTKEQERQLAAGVPLDVRPQPMGRFRRRVPPALEALVQRALAPDPTDRPTAAELAAELDALAPTLDDTPVRPLPAEFTDPDVTSVLPAVKWPA
>NZ_CP053452.1|WP_171470180.1|1832585_1833680_-|GAF-domain-containing-protein
MPDMTAQPSAPADRMTELVEVIQKLSQARDLPTVQDIVRHAARRLTDADGATFVLCEGDHCHFVDEEAVGPLWKGQRFLMANCVSGWAMTNRRPVVIEDVFADPRVPHDTYRPTFVKSLVVVPIRTIEPIGAIGTYWATRHRATDDEVRLIQALADTTAVALENVRVITELEDRVRARTAELESSNRQLVAANCELMAAQQQADRVFAAYAKVLPGSVLDGKYRLDEELGSGGFGVVFRGRHLGLDCPIAVKVFRPVAGNDSGLDLQRFLREGATAARISHPNAVRVLDSGVSSGGVAFLAMELLRGRSLGRERAAVGALPLRAPPPSPGPLPTCWPRPTARASFTATSSRTTCSCTTTGAGKS
>NZ_CP053452.1|WP_171470181.1|1833768_1835223_-|transcription-termination-factor-Rho
MARPEPPREVSRPESPREAPREHTRAERPVDRAEPPAPPRVDPNEHGFDAETNSRYEQIKKGNTYITELQHMTIAQLQKAAKDANVPREEYAGLKKQDLVYRILRELSEANGLMFGEGTLEVLPDGFGFLRSPDYNYLPCPDDIYISPSQIRRFGLRTGAVVAGQTRPPKENERYFALLRVEAINYAEPDLLTSKVVFDDLTPLHPERRLKLETSHDELNTRVIDLITPIGKGQRGLIVAPPRTGKTVLLQKMANSIIQNHPECYVIVLLIDERPEEVTDMSRTVKGPRVEVVSSTFDEAPERHVQVSEMVIEKAKRLVEYGTDVVILLDSITRLARAYNTVSPGSGKLLSGGLDATALYKPKRFFGAARNIEEGGSLTILATALVDTGSKMDEVIFEEFKGTGNMEIHLERRMVERRVYPAIDVNRSGTRKEEMLRSEDELRLVHIMHRILADMNPVEAMDLLLKQLGKHKTNAEFLHSVTLT
>NZ_CP053452.1|WP_171470182.1|1835170_1835533_-|hypothetical-protein
MSESKSDTVKPARSTTRGRPKKVVAAPPVVEQPVVPPAEDDGFGAGIVDAAPAAPPPVTPPPPPPPVVVARRRRPRSPHRSLWRPPRSPHRWPKRAPARTAARSGPPGAAARGVAPRKSA
>NZ_CP053452.1|WP_171470183.1|1835783_1836440_-|dephospho-CoA-kinase
MTRFKHGPKPVIGLVGAIGAGKSTAAKCFTARGGYAIDADALGHEALQQPEIIAALVGKWGEGICKPDGTLDRREIGRIVFADPRQRNALEATVFPYIGERTRQEIFSAQVNPAVAFVLLDAAVLLEAGWGEMVDRLVYVDAPRDTRLARLAARNGWTEAELTAREAAQWPAAEKRARANAVLVNDAGIADLQCQVDRWLAEQSPPHAARTQEILNSD
>NZ_CP053452.1|WP_171470184.1|1836436_1837129_-|Uma2-family-endonuclease
MAGKMESEMWIVGPQSPPIEYPSGDGQPLAETWLHVQAIMPLHQALEDFFRDRSDVFVASDLFWYRQEGSSQKVAPDVMVVPGVGARPRRSFFSWEENGAGPAVVFEMASENTWRDDLDDKYDQYERLGVREYFLFDPEGLYLVPRLQGYRLNGTAYRRLRGAELTSELGFGLRAEDTIVRLIDLKTGRPIPTRAEAVEAERKRADALQMEVERLRARLQQLGRSNGSEG
>NZ_CP053452.1|WP_171470185.1|1837181_1840091_-|DNA-polymerase-I
MIFQMFFGVGPMTAPDGRPTNAVFGVTRSLMNLYDRGADYLIATLDHAEPTFREKIDATYKAHRDPPPDDLLLQEPLIQQVMEAMRIPFLIAPGYEADDVMATVSSEAAARGLDVFLCTSDKDCRQLVTNKVKMLNLRKDGEILDAAAIEADWGVRPDQVIDFQSLVGDSVDNIPGVPGVGPKTAAKWLQQFGTLDNLIAHADTAPGGPKVKQALKDAIANGNLAKSKQLVTLDKHVPIKFDWEGWKRRDWDGQKLLELFHEFGFRGFSERVRRTLAGSGAKKNAEALATAGLAPTPASAEAAPVAESGAKKPAKRKKSTTAAPRTASLFDDLMEEPGAMAALAPAVTQASAEAAVPTDTWSYAGYTTIDTDEKFVTFLAALKKQTAFVFDLETTGLNPVADPIVGYSFAWEPKVAYYLPVRAPQEDAQLDPDRTLAALKPVFENPRVQKRNHNIKFDQIVLAAAGVSLAGVAGDSMLAHYLLDPGARAHGLDDLTLRDLGHKNVAISELIGKGKKQITMDRVRVPLVTRYAGEDADAALQLAALYEPQLAAKGFRELYDTVEVPLIGVLAEMERVGIRVDVPFLEKLGAEMAVELAGIEKGVYELAGRVFNIGSLKELQKILFEEMKLPVQKRTGIKNEPSTDQESLERLAALGHALPKTLIEYRKLIKLKNTYVDVLPALADKGGRVHTSFNQAAVETGRLSSSDPNLQNIPARTEQGAQLRKAFIPRDGWTLVTADYSQIELRLLAQFCGDETLRAAFAEDRDVHTAVAAQIFKVNETDVTKAQRGMAKTVNFGVIYGMSAMGLSVRLAISRKEAEDFIDAYFARYPKVLEYQQTLLGNAHRTGEVRTILGRHRALNKDAINPHSRYQNRGQAEREAINYEIQGSAADLMKRAMLAVSRQLAARKLQSRMLLTVHDELVFEAPPHEVSAVAKLARDEMIGAIQLDVPLKVDVAAGPNWLDVEDVPG
>NZ_CP053452.1|WP_171470186.1|1840448_1840847_-|RidA-family-protein
MGRRLISSGSTFEDEIGYSRAVVDGDWVFVSGTTGFDYQTMTIVDSMPEQTEQCLRNIQAALAQAGASLADVVRVTYVVPKADEFRECWPVLRRYFGAVRPAATMISAGLADPRMRIEIEVTARLRASDVPA
>NZ_CP053452.1|WP_171469115.1|1841050_1841431_+|hypothetical-protein
MSTPRFTAEELDRLRALAAEWGKIVSKRAFGEDGPGLDVDFRTMEQIATAAAQGLTEGALQQMLQQQAQKVPDESPCPVCGERCPTRTHTRALAAQGATVQQAERIAHCPACRRDFFPPAGDSGVG

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Crispr_ID: NZ_CP053452_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053452_9

1903897-1907936

Unclear

Consensus_repeat	Method
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	PILER-CR
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CRISPRCasFinder
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CRT

55 spacers

cas8u1,csb2gr5,cas7,cas3,cas2,cas1

The CRISPR arrays of NZ_CP053452_9

>merge|NZ_CP053452|9|1903897-1907936|PILER-CR,CRISPRCasFinder,CRT
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGCCCTAGGCTGGTGGCGTCGGTCGGGGCCGCACGGAAGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGGTCGCTCCCGGGAGCGGCCCGAGTCCGTTCGCCGGGGGCGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGTTGCCATGCGAAGCCCCTTCAATGCGACCACAGATTTTGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGAAGATGGTGTTGGCGACGAGGTCCCACTGCGCCGCGGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGTTGATGAGGAGCTGCTTCTCGGCGGCCTCGTCGGGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGGATCTGGTTGACCACCTGAAGGACCTGGCCCAGAAGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGAAGTCCGCCCGCGTCTCGTAGGCCCCGAAGTCGGAGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGCCAGTCCTCGCGCACGGCCCAGCCCCAGGCGAGGTTGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGTTTGCCTCACACTTGGGGCAATTCCACTTCTTATGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGGCGGATCTCCTTGCCGTCGGCGCTGGCCTCGTCTTCGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGATTCAGATCCTCTCCCGGCCCCCGGCGGCGTACTACTTCGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGTGCGACAGGCCGAAGACGCCCATGCGGCGCCGCACGTCCTCGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGCCGAGCCTGGAAGCGGAACTCGTGAGCCGCTCGATCGGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGTTGCCGCCCTCGACCCGGACCGTCAGGGCGAACCCGGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGGTGAAGTCCATGACCGACCCGGAGAAATGGGCTCTGAGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGTTTGCCGACATGGGCACGCGGCCCGTCGGCGCGAGCATGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGTTGATGTCCGCGAGGAGCTTCTTGCCCGTCTCGGCGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGCCGGGCTGATGGGATTCAGCCCGGCGTGACTGATGGTGGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGACGCCGCCGGCGAGGAGGTCTGGTTCCTGGAGGACGCTTGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGCGCCAGCGCCTGTACGCCCTCATGGGCCTCGAGGAGGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGTGTCAGGCCCCCGGCGTCTCCCCGTACTCCCCATACGTGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGGAGTCCCTGGCGAAGGTCATGGGCAAGCCCGTGTCCCGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGTGTGTTAGGTGCCCCCAACTGGCATTTCGCCACGCGGGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGGATGAGCAGCGACCTAGTGGGAAGGCGATTCGGACGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGGGACGGCCCCTTGACGAGCGCGACGGCGGGGAAGGTGGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGAGTTCGTCTTCGGTTCGGGCCGCGGCGATGGCGTCGGGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGGAGTGCGCGTCGTGGCCGGACCTCGCGACGCGGTTCGAGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGCTTATGAAGTCGGCGGTAACGGTCGTGACGGCGTCGCTGGGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGTTCATCAACTTCGGGCGAGGCCCGGACGTGCACTGGGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGTCGTTTCTGCACGCCCCGTGCCATCGGCCGGGCATGGAGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGGTGAACGCGTAGGCGGTCGTGCCCACCTTGACGGAGCCGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGACGATCCACGGCGGGGTCCAGCCCCAGAGCGTCGTCGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGCGCGGACAGCGTCCTTTTGTTCGGCGGCGCAATCACGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGAAGGCGTTCTGCGTGTCGCGCGGCGACACGCTTCGTAGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGCCAACCGGGCAGGTTCAGGATGTTCACGACCCCTCCCGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGGCGGCGTACCAGCGGGCCATGCTCGCGTCCGTCGAGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGGCGAACAACGTGGCCCCGAGCACCGCGATCACAAACGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGCGCCCCATCCAGCTGACCACGAAGTAGTAGTAGGCCCAGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGAGCGCGTCGAACACGGCCTTGAGCTTGAACATCAGGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGTGGCCGCGCTGAGCCCGGTCCCGGCGGGCCTGTGACGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGTCATATACGAGGTAGCTGCCCGGAGTGGCGTAAGCGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGATGTTCTCGAGTTCGGCGTCGCGGTCGAGCTCCTCCCGGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGTTACAAACCACGAAAAAATGAAATCGAGTGTTGACAAGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGAGGGCAACAAGGGCAGCAAGGCCGCACCGGTGGTCGCGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGCGAGAACATTCACACCGCTCGGTACACAAAACTCTAGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGCAACCGGGCCTCGAGCCGTGCCCGGTCCTGAAGGCACTCTGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGCTTGAGATACCAGGCCAGCACGTCGGCCACGCGCTCAGCGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGGGAGGGGCGGCGGGGGGACCAGAGGCGCGAGAGGCGGCGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGGCGGTGTAGCCCGCGTACCCCAGCGCCCGCAGCAGGCGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGGGAAACCTCGGCACCGACCTGCTTCGTACCCTTCGTGGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGTACGAGATGTGCTTTATTGGGACGGAGTTTATAGTCGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGGTTATGGCCTACCCCAAACCTGCCGAACGGCGGCCGGGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGGTCTCAACCTTCGGGGCCGGCGTCTCGGGAGCGGGGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGTCTAAAGCGTAGGCCAGGCAAGGCAATTCCGCTCGGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGTGCACCAGCTGCCCGGCCTTGACCACCGGCGCGTAGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG

>NZ_CP053452|9|1|1903897-1907936|PILER-CR
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CCCTAGGCTGGTGGCGTCGGTCGGGGCCGCACGGAA
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GTCGCTCCCGGGAGCGGCCCGAGTCCGTTCGCCGGGGGC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TTGCCATGCGAAGCCCCTTCAATGCGACCACAGATTTT
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	AAGATGGTGTTGGCGACGAGGTCCCACTGCGCCGCG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TTGATGAGGAGCTGCTTCTCGGCGGCCTCGTCGG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GATCTGGTTGACCACCTGAAGGACCTGGCCCAGAA
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	AAGTCCGCCCGCGTCTCGTAGGCCCCGAAGTCGGA
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CCAGTCCTCGCGCACGGCCCAGCCCCAGGCGAGGTT
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TTTGCCTCACACTTGGGGCAATTCCACTTCTTAT
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GCGGATCTCCTTGCCGTCGGCGCTGGCCTCGTCTTC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	ATTCAGATCCTCTCCCGGCCCCCGGCGGCGTACTACTTC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TGCGACAGGCCGAAGACGCCCATGCGGCGCCGCACGTCCTC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CCGAGCCTGGAAGCGGAACTCGTGAGCCGCTCGATCG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TTGCCGCCCTCGACCCGGACCGTCAGGGCGAACCCG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GTGAAGTCCATGACCGACCCGGAGAAATGGGCTCTGA
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TTTGCCGACATGGGCACGCGGCCCGTCGGCGCGAGCAT
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TTGATGTCCGCGAGGAGCTTCTTGCCCGTCTCGGC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CCGGGCTGATGGGATTCAGCCCGGCGTGACTGATGGTG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	ACGCCGCCGGCGAGGAGGTCTGGTTCCTGGAGGACGCTT
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CGCCAGCGCCTGTACGCCCTCATGGGCCTCGAGGAG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TGTCAGGCCCCCGGCGTCTCCCCGTACTCCCCATACGT
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GAGTCCCTGGCGAAGGTCATGGGCAAGCCCGTGTCCC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TGTGTTAGGTGCCCCCAACTGGCATTTCGCCACGCGG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GATGAGCAGCGACCTAGTGGGAAGGCGATTCGGAC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GGACGGCCCCTTGACGAGCGCGACGGCGGGGAAGGTG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	AGTTCGTCTTCGGTTCGGGCCGCGGCGATGGCGTCGG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GAGTGCGCGTCGTGGCCGGACCTCGCGACGCGGTTCGA
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CTTATGAAGTCGGCGGTAACGGTCGTGACGGCGTCGCTGG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TTCATCAACTTCGGGCGAGGCCCGGACGTGCACTGG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TCGTTTCTGCACGCCCCGTGCCATCGGCCGGGCATGGA
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GTGAACGCGTAGGCGGTCGTGCCCACCTTGACGGAGCC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	ACGATCCACGGCGGGGTCCAGCCCCAGAGCGTCGTC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CGCGGACAGCGTCCTTTTGTTCGGCGGCGCAATCAC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	AAGGCGTTCTGCGTGTCGCGCGGCGACACGCTTCGTA
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CCAACCGGGCAGGTTCAGGATGTTCACGACCCCTCCC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GCGGCGTACCAGCGGGCCATGCTCGCGTCCGTCGA
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GCGAACAACGTGGCCCCGAGCACCGCGATCACAAAC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CGCCCCATCCAGCTGACCACGAAGTAGTAGTAGGCCCA
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	AGCGCGTCGAACACGGCCTTGAGCTTGAACATCAG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TGGCCGCGCTGAGCCCGGTCCCGGCGGGCCTGTGAC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TCATATACGAGGTAGCTGCCCGGAGTGGCGTAAGC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	ATGTTCTCGAGTTCGGCGTCGCGGTCGAGCTCCTCCCG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TTACAAACCACGAAAAAATGAAATCGAGTGTTGACAA
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	AGGGCAACAAGGGCAGCAAGGCCGCACCGGTGGTCGC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CGAGAACATTCACACCGCTCGGTACACAAAACTCTA
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CAACCGGGCCTCGAGCCGTGCCCGGTCCTGAAGGCACTCT
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CTTGAGATACCAGGCCAGCACGTCGGCCACGCGCTCAGC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GGAGGGGCGGCGGGGGGACCAGAGGCGCGAGAGGCGGC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GCGGTGTAGCCCGCGTACCCCAGCGCCCGCAGCAGGC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GGAAACCTCGGCACCGACCTGCTTCGTACCCTTCGTG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TACGAGATGTGCTTTATTGGGACGGAGTTTATAGTC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GTTATGGCCTACCCCAAACCTGCCGAACGGCGGCCGG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GTCTCAACCTTCGGGGCCGGCGTCTCGGGAGCGGG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TCTAAAGCGTAGGCCAGGCAAGGCAATTCCGCTCG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TGCACCAGCTGCCCGGCCTTGACCACCGGCGCGTA
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG

>NZ_CP053452|9|9|1903897-1907936|CRISPRCasFinder
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CCCTAGGCTGGTGGCGTCGGTCGGGGCCGCACGGAA
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GTCGCTCCCGGGAGCGGCCCGAGTCCGTTCGCCGGGGGC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TTGCCATGCGAAGCCCCTTCAATGCGACCACAGATTTT
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	AAGATGGTGTTGGCGACGAGGTCCCACTGCGCCGCG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TTGATGAGGAGCTGCTTCTCGGCGGCCTCGTCGG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GATCTGGTTGACCACCTGAAGGACCTGGCCCAGAA
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	AAGTCCGCCCGCGTCTCGTAGGCCCCGAAGTCGGA
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CCAGTCCTCGCGCACGGCCCAGCCCCAGGCGAGGTT
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TTTGCCTCACACTTGGGGCAATTCCACTTCTTAT
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GCGGATCTCCTTGCCGTCGGCGCTGGCCTCGTCTTC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	ATTCAGATCCTCTCCCGGCCCCCGGCGGCGTACTACTTC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TGCGACAGGCCGAAGACGCCCATGCGGCGCCGCACGTCCTC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CCGAGCCTGGAAGCGGAACTCGTGAGCCGCTCGATCG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TTGCCGCCCTCGACCCGGACCGTCAGGGCGAACCCG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GTGAAGTCCATGACCGACCCGGAGAAATGGGCTCTGA
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TTTGCCGACATGGGCACGCGGCCCGTCGGCGCGAGCAT
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TTGATGTCCGCGAGGAGCTTCTTGCCCGTCTCGGC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CCGGGCTGATGGGATTCAGCCCGGCGTGACTGATGGTG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	ACGCCGCCGGCGAGGAGGTCTGGTTCCTGGAGGACGCTT
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CGCCAGCGCCTGTACGCCCTCATGGGCCTCGAGGAG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TGTCAGGCCCCCGGCGTCTCCCCGTACTCCCCATACGT
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GAGTCCCTGGCGAAGGTCATGGGCAAGCCCGTGTCCC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TGTGTTAGGTGCCCCCAACTGGCATTTCGCCACGCGG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GATGAGCAGCGACCTAGTGGGAAGGCGATTCGGAC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GGACGGCCCCTTGACGAGCGCGACGGCGGGGAAGGTG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	AGTTCGTCTTCGGTTCGGGCCGCGGCGATGGCGTCGG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GAGTGCGCGTCGTGGCCGGACCTCGCGACGCGGTTCGA
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CTTATGAAGTCGGCGGTAACGGTCGTGACGGCGTCGCTGG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TTCATCAACTTCGGGCGAGGCCCGGACGTGCACTGG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TCGTTTCTGCACGCCCCGTGCCATCGGCCGGGCATGGA
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GTGAACGCGTAGGCGGTCGTGCCCACCTTGACGGAGCC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	ACGATCCACGGCGGGGTCCAGCCCCAGAGCGTCGTC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CGCGGACAGCGTCCTTTTGTTCGGCGGCGCAATCAC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	AAGGCGTTCTGCGTGTCGCGCGGCGACACGCTTCGTA
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CCAACCGGGCAGGTTCAGGATGTTCACGACCCCTCCC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GCGGCGTACCAGCGGGCCATGCTCGCGTCCGTCGA
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GCGAACAACGTGGCCCCGAGCACCGCGATCACAAAC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CGCCCCATCCAGCTGACCACGAAGTAGTAGTAGGCCCA
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	AGCGCGTCGAACACGGCCTTGAGCTTGAACATCAG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TGGCCGCGCTGAGCCCGGTCCCGGCGGGCCTGTGAC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TCATATACGAGGTAGCTGCCCGGAGTGGCGTAAGC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	ATGTTCTCGAGTTCGGCGTCGCGGTCGAGCTCCTCCCG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TTACAAACCACGAAAAAATGAAATCGAGTGTTGACAA
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	AGGGCAACAAGGGCAGCAAGGCCGCACCGGTGGTCGC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CGAGAACATTCACACCGCTCGGTACACAAAACTCTA
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CAACCGGGCCTCGAGCCGTGCCCGGTCCTGAAGGCACTCT
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CTTGAGATACCAGGCCAGCACGTCGGCCACGCGCTCAGC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GGAGGGGCGGCGGGGGGACCAGAGGCGCGAGAGGCGGC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GCGGTGTAGCCCGCGTACCCCAGCGCCCGCAGCAGGC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GGAAACCTCGGCACCGACCTGCTTCGTACCCTTCGTG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TACGAGATGTGCTTTATTGGGACGGAGTTTATAGTC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GTTATGGCCTACCCCAAACCTGCCGAACGGCGGCCGG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GTCTCAACCTTCGGGGCCGGCGTCTCGGGAGCGGG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TCTAAAGCGTAGGCCAGGCAAGGCAATTCCGCTCG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TGCACCAGCTGCCCGGCCTTGACCACCGGCGCGTA
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG

>NZ_CP053452|9|1|1903897-1907936|CRT
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CCCTAGGCTGGTGGCGTCGGTCGGGGCCGCACGGAA
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GTCGCTCCCGGGAGCGGCCCGAGTCCGTTCGCCGGGGGC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TTGCCATGCGAAGCCCCTTCAATGCGACCACAGATTTT
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	AAGATGGTGTTGGCGACGAGGTCCCACTGCGCCGCG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TTGATGAGGAGCTGCTTCTCGGCGGCCTCGTCGG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GATCTGGTTGACCACCTGAAGGACCTGGCCCAGAA
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	AAGTCCGCCCGCGTCTCGTAGGCCCCGAAGTCGGA
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CCAGTCCTCGCGCACGGCCCAGCCCCAGGCGAGGTT
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TTTGCCTCACACTTGGGGCAATTCCACTTCTTAT
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GCGGATCTCCTTGCCGTCGGCGCTGGCCTCGTCTTC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	ATTCAGATCCTCTCCCGGCCCCCGGCGGCGTACTACTTC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TGCGACAGGCCGAAGACGCCCATGCGGCGCCGCACGTCCTC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CCGAGCCTGGAAGCGGAACTCGTGAGCCGCTCGATCG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TTGCCGCCCTCGACCCGGACCGTCAGGGCGAACCCG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GTGAAGTCCATGACCGACCCGGAGAAATGGGCTCTGA
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TTTGCCGACATGGGCACGCGGCCCGTCGGCGCGAGCAT
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TTGATGTCCGCGAGGAGCTTCTTGCCCGTCTCGGC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CCGGGCTGATGGGATTCAGCCCGGCGTGACTGATGGTG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	ACGCCGCCGGCGAGGAGGTCTGGTTCCTGGAGGACGCTT
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CGCCAGCGCCTGTACGCCCTCATGGGCCTCGAGGAG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TGTCAGGCCCCCGGCGTCTCCCCGTACTCCCCATACGT
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GAGTCCCTGGCGAAGGTCATGGGCAAGCCCGTGTCCC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TGTGTTAGGTGCCCCCAACTGGCATTTCGCCACGCGG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GATGAGCAGCGACCTAGTGGGAAGGCGATTCGGAC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GGACGGCCCCTTGACGAGCGCGACGGCGGGGAAGGTG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	AGTTCGTCTTCGGTTCGGGCCGCGGCGATGGCGTCGG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GAGTGCGCGTCGTGGCCGGACCTCGCGACGCGGTTCGA
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CTTATGAAGTCGGCGGTAACGGTCGTGACGGCGTCGCTGG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TTCATCAACTTCGGGCGAGGCCCGGACGTGCACTGG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TCGTTTCTGCACGCCCCGTGCCATCGGCCGGGCATGGA
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GTGAACGCGTAGGCGGTCGTGCCCACCTTGACGGAGCC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	ACGATCCACGGCGGGGTCCAGCCCCAGAGCGTCGTC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CGCGGACAGCGTCCTTTTGTTCGGCGGCGCAATCAC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	AAGGCGTTCTGCGTGTCGCGCGGCGACACGCTTCGTA
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CCAACCGGGCAGGTTCAGGATGTTCACGACCCCTCCC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GCGGCGTACCAGCGGGCCATGCTCGCGTCCGTCGA
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GCGAACAACGTGGCCCCGAGCACCGCGATCACAAAC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CGCCCCATCCAGCTGACCACGAAGTAGTAGTAGGCCCA
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	AGCGCGTCGAACACGGCCTTGAGCTTGAACATCAG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TGGCCGCGCTGAGCCCGGTCCCGGCGGGCCTGTGAC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TCATATACGAGGTAGCTGCCCGGAGTGGCGTAAGC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	ATGTTCTCGAGTTCGGCGTCGCGGTCGAGCTCCTCCCG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TTACAAACCACGAAAAAATGAAATCGAGTGTTGACAA
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	AGGGCAACAAGGGCAGCAAGGCCGCACCGGTGGTCGC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CGAGAACATTCACACCGCTCGGTACACAAAACTCTA
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CAACCGGGCCTCGAGCCGTGCCCGGTCCTGAAGGCACTCT
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CTTGAGATACCAGGCCAGCACGTCGGCCACGCGCTCAGC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GGAGGGGCGGCGGGGGGACCAGAGGCGCGAGAGGCGGC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GCGGTGTAGCCCGCGTACCCCAGCGCCCGCAGCAGGC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GGAAACCTCGGCACCGACCTGCTTCGTACCCTTCGTG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TACGAGATGTGCTTTATTGGGACGGAGTTTATAGTC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GTTATGGCCTACCCCAAACCTGCCGAACGGCGGCCGG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GTCTCAACCTTCGGGGCCGGCGTCTCGGGAGCGGG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TCTAAAGCGTAGGCCAGGCAAGGCAATTCCGCTCG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TGCACCAGCTGCCCGGCCTTGACCACCGGCGCGTA
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053452.1\|WP_171470220.1\|1891079_1893053_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223496
NZ_CP053452.1\|WP_171468897.1\|1917740_1918943_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171470230.1\|1921071_1921839_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171470225.1\|1897794_1899969_+\|type-I-U-CRISPR-associated-protein-Csx17	cas8u1	cd09767_cas8u1_CAS-I-U	gnl\|CDD\|274989
NZ_CP053452.1\|WP_171470226.1\|1899974_1901060_+\|type-I-U-CRISPR-associated-protein-Cas7	cas7	cd09678_cas7_CAS-I-U	gnl\|CDD\|378223
NZ_CP053452.1\|WP_171470227.1\|1901066_1902677_+\|type-I-U-CRISPR-associated-protein-Cas5/Cas6	csb2gr5	pfam09609_csb2gr5_CAS-I-U	gnl\|CDD\|320705
NZ_CP053452.1\|WP_171470223.1\|1895123_1895408_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP053452.1\|WP_171468988.1\|1890385_1891060_+\|transposase	unknown	unknown	gnl\|CDD\|315923
NZ_CP053452.1\|WP_171470222.1\|1893402_1895124_+\|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|376633
NZ_CP053452.1\|WP_171468866.1\|1913240_1913588_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171470229.1\|1920466_1920979_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274357
NZ_CP053452.1\|WP_171468900.1\|1909595_1909973_-\|IS66-family-insertion-sequence-element-accessory-protein-TnpB	unknown	unknown	gnl\|CDD\|377551
NZ_CP053452.1\|WP_171468899.1\|1913972_1915529_+\|IS66-family-transposase	unknown	unknown	gnl\|CDD\|376980
NZ_CP053452.1\|WP_171468899.1\|1908025_1909582_-\|IS66-family-transposase	unknown	unknown	gnl\|CDD\|376980
NZ_CP053452.1\|WP_171470228.1\|1902839_1903655_+\|hypothetical-protein	cas8u1	mkCas0114_cas8u1_CAS-I-U	unknown
NZ_CP053452.1\|WP_171468898.1\|1915812_1917369_+\|IS66-family-transposase	unknown	unknown	gnl\|CDD\|376980
NZ_CP053452.1\|WP_171470221.1\|1893151_1893361_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171470224.1\|1895404_1897798_+\|CRISPR-associated-helicase-Cas3'	cas3	cd09696_cas3_CAS-I-U	gnl\|CDD\|274235
NZ_CP053452.1\|WP_171468900.1\|1913581_1913959_+\|IS66-family-insertion-sequence-element-accessory-protein-TnpB	unknown	unknown	gnl\|CDD\|377551
NZ_CP053452.1\|WP_171468866.1\|1909966_1910314_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP053452.1\|WP_171470220.1\|1891079_1893053_+\|hypothetical-protein	gnl\|CDD\|223496	COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair].	6.42727e-16
NZ_CP053452.1\|WP_171470225.1\|1897794_1899969_+\|type-I-U-CRISPR-associated-protein-Csx17	gnl\|CDD\|274989	TIGR04113, hypothetical_protein_AaLAA1DRAFT_1703, CRISPR-associated protein Csx17, subtype Dpsyc. Members of this protein family are found exclusively in CRISPR-associated (cas) type I system gene clusters of the Dpsyc subtype. Markers for that type include a variant form of cas3 (model TIGR02621) and the GSU0054-like protein family (model TIGR02165). This family occurs in less than half of known Dpsyc clusters.	0
NZ_CP053452.1\|WP_171470226.1\|1899974_1901060_+\|type-I-U-CRISPR-associated-protein-Cas7	gnl\|CDD\|378223	pfam09617, Cas_GSU0053, CRISPR-associated protein GSU0053 (Cas_GSU0053). This entry is found in CRISPR-associated (cas) proteins in the genomes of Geobacter sulfurreducens PCA and Desulfotalea psychrophila LSv54 (both Desulfobacterales from the Deltaproteobacteria), Gemmata obscuriglobus (a Planctomycete), and Actinomyces naeslundii MG1 (Actinobacteria).	5.46677e-42
NZ_CP053452.1\|WP_171470227.1\|1901066_1902677_+\|type-I-U-CRISPR-associated-protein-Cas5/Cas6	gnl\|CDD\|320705	cd09734, Csb2_I-U, CRISPR/Cas system-associated protein Csb2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Duplicated RAMP domains; also known as GSU0054 family.	1.45076e-36
NZ_CP053452.1\|WP_171470223.1\|1895123_1895408_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	4.84418e-25
NZ_CP053452.1\|WP_171468988.1\|1890385_1891060_+\|transposase	gnl\|CDD\|315923	pfam13358, DDE_3, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	3.44493e-23
NZ_CP053452.1\|WP_171470222.1\|1893402_1895124_+\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	3.72652e-121
NZ_CP053452.1\|WP_171470229.1\|1920466_1920979_+\|hypothetical-protein	gnl\|CDD\|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	4.02492e-07
NZ_CP053452.1\|WP_171468899.1\|1913972_1915529_+\|IS66-family-transposase	gnl\|CDD\|376980	pfam03050, DDE_Tnp_IS66, Transposase IS66 family. Transposase proteins are necessary for efficient DNA transposition. This family includes IS66 from Agrobacterium tumefaciens.	3.24166e-90
NZ_CP053452.1\|WP_171468899.1\|1908025_1909582_-\|IS66-family-transposase	gnl\|CDD\|376980	pfam03050, DDE_Tnp_IS66, Transposase IS66 family. Transposase proteins are necessary for efficient DNA transposition. This family includes IS66 from Agrobacterium tumefaciens.	3.24166e-90
NZ_CP053452.1\|WP_171470224.1\|1895404_1897798_+\|CRISPR-associated-helicase-Cas3'	gnl\|CDD\|274235	TIGR02621, CRISPR-associated_helicase_Cas3, CRISPR-associated helicase Cas3, subtype Dpsyc. This model describes a CRISPR-associated putative DEAH-box helicase, or Cas3, of a subtype found in Actinomyces naeslundii MG1, Geobacter sulfurreducens PCA, Gemmata obscuriglobus UQM 2246, and Desulfotalea psychrophila. This protein includes both DEAH and HD motifs.	7.03033e-58
NZ_CP053452.1\|WP_171468898.1\|1915812_1917369_+\|IS66-family-transposase	gnl\|CDD\|376980	pfam03050, DDE_Tnp_IS66, Transposase IS66 family. Transposase proteins are necessary for efficient DNA transposition. This family includes IS66 from Agrobacterium tumefaciens.	6.71559e-93
NZ_CP053452.1\|WP_171468900.1\|1909595_1909973_-\|IS66-family-insertion-sequence-element-accessory-protein-TnpB	gnl\|CDD\|377551	pfam05717, TnpB_IS66, IS66 Orf2 like protein. This protein is found in insertion sequences related to IS66. The function of these proteins is uncertain, but they are probably essential for transposition.	2.4029e-39
NZ_CP053452.1\|WP_171468900.1\|1913581_1913959_+\|IS66-family-insertion-sequence-element-accessory-protein-TnpB	gnl\|CDD\|377551	pfam05717, TnpB_IS66, IS66 Orf2 like protein. This protein is found in insertion sequences related to IS66. The function of these proteins is uncertain, but they are probably essential for transposition.	2.4029e-39

>NZ_CP053452.1|WP_171470228.1|1902839_1903655_+|hypothetical-protein
MSWGRHRSPTVPVLHLPGPPPSPTDVDAYLASRLAKSVEDHPSAWVVEMLERGLGKDATRDFSDIKRHAVPPVHADRHRLDWVTALSCESAIDADRQLQKVRCDYLIGNLKSLLAGAGADHLRRTLFDTWDYADGRSNQSLHGEPSEDRRHAYQWHQPNGDPTRKRRGGMLGANRLALEAWPLFPSFPDGPDRVRTRGFRGNRAGSTFWLWPLWSSCLTPDAVASILSVPNLQSSAGDTDSVRCLGVTAVYRSQRILVGKTPNLTPADAIV
>NZ_CP053452.1|WP_171470227.1|1901066_1902677_+|type-I-U-CRISPR-associated-protein-Cas5/Cas6
MPVTLKLTFPGGRYHATPWGRHVNEGVAEWPLSPWRLLRAFVATWKRKCADLSEEQVRRVLAPLLPAPKFHLPPARVAHTRHYMPWEKKGPADHTLVFDTFVSIGRNDPLFVHWADANLNPEEAAALTRLADNLTTLGRAEGWVQVEVTSETADWNCEPKAQSTSIEELVPVFCPDPATAFGDEHYPPKPDAKALKKGLKPGDLLFDCPRWHLCLDTETIHGERWPRVPGSAWVSYARPANAFTRRTAPAAPPARAARLPTVARFLLDGPVLPFVTNTIRVAEAFRLAAMGRFGAWCRQHQREGVEFCRTDQPDKFSSPTLSGKHLNGEMRADHGHAHYLPTAEGDDTRRLTHLTVYAENGFGPGEVAALTAVREFEVPAGGGRMQPLRTQLVGLGTRDLFRTAVPLFGASAVWRSVTPFVAHRHPKRRGSKRDAPLVMGPDGRQSFAELAVRELVARREIAPLTGVEPIEVFDGGTRSVEFERGRARPGDDGRSRSHAGFRLTFANRVSGPVSLGYACHYGLGLFVPDRTERSGD
>NZ_CP053452.1|WP_171470226.1|1899974_1901060_+|type-I-U-CRISPR-associated-protein-Cas7
MPVDLEALKSAPRILIEAALKPVAGTRIQPTGFPDLGPATYQDADDVPTLLVESAQSMANRLEAVCWDEGANAIATELEGLSYVNVKLAGLGDGTDTTNSLQEFHRLNSPYIMSGKTADGKAFADVLKPELGLASVAGAGKKATKKKDDTATADEPAATEKEPDDVAGVVNLRKLATVCFKYDPNSLVHGVFLEKIAGRLRHPRALSAFIEATGVGRADSGGVKFDRALPKPKVAGLDAKGGYGNVPFHRTEFTAKAITAFFSFDLSQIRGYGLPADATALLTVLSLWKVRKFLDSNMRLRSACELELAEGDKSIVVKRPLDSFKLPTADDLAAELKKLINKCKDLFAKPVVTELTWKAKE
>NZ_CP053452.1|WP_171470225.1|1897794_1899969_+|type-I-U-CRISPR-associated-protein-Csx17
MSVVELPGCTPEPLMSYLKALGVFRLIADQADSSARGCWRGGRFVLETTLSRDSLVKFFSEQFHPSPILAPWNGGSGFYGGGSDPLNAIAHSTNSRLTLYRDTIAAVRQIAPAGKPKDEDKASLLVRCRAALSDEVVPWLDTCFVLGEEGPGYFPLLGTGGNDGRLDFTNNFMQRLADVIAFTAGVPAPAASKGWLASALFANDPALTAYEKAAVGQFNPGGIGGANGVQGNFEANSRVNPWDFVLMIEGALLFAGSVARRLGATVGDRAVFPFTVNSVAVGYGSATASEETTDGSRAELWLPLWDEPARFAEIRQLFGEGRAQVNRRQAKNSIEFALAVNLLGVSRGVTEFSRYGFLKRNGLAFLAAPLGRVPVNPRPAARLLEEAPLRDWLDRLRLACREKDKTPARYQTALRDIDRAIFEFATRSELGELADHRGLLDVLRAVGRAEHTLAGGLAFCKDKYLKPLQGLSVQWLEQANDGSPEFALAASVAGISESKGVGPLRVFLEEVEAKGAYFNWSPGSTSSVWSKRSLTDNLAAVFRRRQMEAFRTGQSGLPLKSPRPASLESLFHFLAEHTDDEKLHDLLWGLSAIDWNTVEDFKLPAVPAPDLAIPFEFGVPRLLVSPFATTDGGETTTPDQDVFHALASGRGDAVSQCVDRAAKRLKSSGLLVNGYRNRYRAGASLGVASAIQPARLLAAMLFPLSDRDLMRIANAVLYPPETQE
>NZ_CP053452.1|WP_171470224.1|1895404_1897798_+|CRISPR-associated-helicase-Cas3'
MTTWKSFVEFFQAATGGRDPYPYQSRFADASTLPHLLRAPTGAGKTATAVLGWLWRWKTKPKETPRRLVYCLPMRVLVEQSYHEAEAWLKSLELSNDICLPLPLMGGSDSGDWHLTPEKPAILIGTQDMLLSRALNRGYAATRFHWPIEFGLLNNDCLWIFDEPQLMASGVSTSAQLAGLRHSLKTFGECRSVWMSATLEPNWLDTVDFRGKFPAAPMELAATDYATPALDRRMTASKTLGRLNAAVSKDMKDVAKEVLRLHKEAGEAQTLVVLNTVDRAKAVFAALQDLRKKSELPKLLLVHSRFRPHERGELNRLLQEKGEAAKDRIIVATQVVEAGVDISARTLVTELAPWASAVQRIGRCNRTGDDGPGRVYWIDLDEEKQGMPYEVTDLTFARKQLNALDGKDVSPKALDDFKTQNKIMLPFAHKHVLRRRDLLDLFDTSPDLSGNDIDVSRFVRSDDPDTDVQVFWRAVDSTGPTADEPDEHRAELCNVPIGQARDFLSKIAEQKLSGFVWDHIDREWVKLDPRQVRPALTILLPVAAGGYHTELGWTGDTKNAVAALPPDLARAARKEATDSDSNCETPHPRTIAQHTEGVCKAVDSILGAVDALLPNGWPERLQTAARWHDVGKGHDAFQIGMRRANPGLVAGTLWAKSGVSVRLRHGRKYFRHELASALVALQSGQSFEIAYLILAHHGKARLSIRALPKEDMPDDPKTLFALGVHDGDTLPSVDLGGVTFSGIKLDLSPMQLGGDSWTARALKLLEELGPFKLAYLEALLRAADQRVSNAERRRESP
>NZ_CP053452.1|WP_171470223.1|1895123_1895408_+|CRISPR-associated-endonuclease-Cas2
MDSYLVCYDISNPKRLRKVARTCEDFGYRKQFSVFLVRVSPTDFVRLRSRLYDIINLDEDQVLFIPLTESALQRTEAIGRPTDAYNKHDVVIIL
>NZ_CP053452.1|WP_171470222.1|1893402_1895124_+|CRISPR-associated-endonuclease-Cas1
MSATTDPIPVRALNQVTYCPRLYFLQYVDCVMPVNEHVEGGLFDHRRVDSGDLKNKTRTDRGTATSRGIALSSEALGISGILDVIEEKNGEQYPVETKHGKAPHDDDGKPTIWDNDAVQLCAQALLMEEAFGQPVPRGYQFHAGSRERVPLEFTDALRQKTQAAITRCRELQVLDAPPEPLPAELRHRCFGCSLASVCQPEEILYQIGHPNPADADAPSAKTLPDVRLVIPRSDNGAVLYLQEPGSSVGKRSEHLVIKKDGKEMNRVPLHAVRQVVVCGNVQVSTQALETMAENEIGVSYVTGHGRFIGSFVPAPAKNVSLREAQFRKFSDPAACLELSKSVVRAKLANQRTLLMRTLRGEEEARGSHEPAAKGIYGLLAGLDRVTSVESVLGTEGQGAALYFGEFGRFLKQPPTGKGFDFTTRNRRPPRDPVNALLSFAYAMLAKDCFAAVCTVGFDPYKGFFHQGRHGKPSLALDLMEEFRPVIADSVVLTLINNESLTPADFIIWRDACNLTDAGRKAFFAAYEQRKSAEVTHPVYGYRMSYARMLEVQARMLAAFVRGEIPTYTGFMVR
>NZ_CP053452.1|WP_171470221.1|1893151_1893361_+|hypothetical-protein
MESVLVAAYTQLLKAHPNACSVDRILEHPNLRTQFLELVRTSAVERPEFDVLHTLNNLRKRSKLPRRSD
>NZ_CP053452.1|WP_171470220.1|1891079_1893053_+|hypothetical-protein
MVAAEFSQRDLEGERACIERQLREAAARAAEGEQIRENHQRFEELERVLPSVSESLVLCARLVEHDADITRFSSELAAAMAARDSAAAAVADLRGRATACEGRAQNAGRETERLRERIDRDRRSLALADEVATLERKLRDIPTDLDVRLAAAEQSVREYGEQQRAAGERRSAAAGLLKAAEKRRRDFDSVTIGAECSRCGQPVSEEHARRERAELDDEVQCHRTERDATTHDETTATAALTAATTERDQLANVVRERNRVRDRFHDQRGVLAAQGICADAAVLRAEIEEHTRQAEGFDRAAADARGEKQEAEAAAAGQEATREQADARVATLTLRLTTATTRQATDAGRMDTLLDLLPSAWRDRVPAMTDADLHRELTDLDQLRTSDIRAQFLKLTEDATRRNEWGLRLTALDSAIEQVPTEARCSVPSAESLLKTTGERLASAKADHQSALGRNEQFRGHAERRRTLDEQHRALDLDCRLHDELADLLGAQRLQRDLVRTAEREIVRYANDTVRNLSRGDLTIELDDADDGPDRAFALRVRRAENPTPIGVVFLSGSQKFRVAVAVALAIGRFASRQARPLESVIIDEGFGSLDRDGLQAMGDELRNLQQCHSLRRLILVSHQEEFVARFPVGYRLEPGDGGTTAVRFRRECGAEV
>NZ_CP053452.1|WP_171468988.1|1890385_1891060_+|transposase
MCDCYQAAPTGLKSGVHTVCVDEMTGVQAKERIAPTKPMRPGQVEKVEFEYKRHGTQCLIGNFEVATGQVIAPTVQATRGEKDFATHIERTVATDPQAGWIFVADNLTTHTSATLVLWVASLCGVAAESLGQKGKSGVLKSVATRKAFLTDPRHRVRFVYVPKHTSWLNQVEIWFSVLARRVVRRGNFRSVADLREKILAYIAYHNRTRAKPYKWTYTGRPLNV
>NZ_CP053452.1|WP_171468899.1|1908025_1909582_-|IS66-family-transposase
MDSDAPLPTDVLTLQGMVRALQAENADLRTQLQRQAEQFQRTIDDLRAEVAALKAKLDRATTHRFGRRSERTPKPPKVPGDGPAKRRHDHGRSPLPAHLERRDTVLDLTPDERRCSGCGGDRVCIGQTQTEQLDCDPTPYFVRRTIRKTYACQQCPPTVRAEDRIRTATPSTVGPIDKGLCGPGLLAEVLVGKFLDHLPLHRQVARIGRAGVTVSESTLGDWVKQSAVLLTSLYQLMLERVRTCPVLWSDDTRSRFAQPGERTMPHGHFWVGIGDPTAPYTAFHFTTGYDAASGPDQFLGGFRGHVHADCLAQYNGLFAAGAKHVACWSHARRKFLGAGDPGAKAVERINRLYHIEHTLPAPDSPEHIVARRATRQARALPILNDLKAWLDAALGTALPKSALGAAIRYVANHWAAFVRYTEDGRLSIDNNLSERTLRLIAVGRSNWKFVGSAKAGAHAAVHFSVVGTCRHLGLDATAYLREVLPALHALGEKPTADQLAPLLPDVWAKRQQSRLLVA
>NZ_CP053452.1|WP_171468900.1|1909595_1909973_-|IS66-family-insertion-sequence-element-accessory-protein-TnpB
MLSIPPTTQLWYGGAVDLRLGFDGLYRHVQSTLQADPLSGHLFIFTNRSANRLKALYWTRHGLCLWCQRLERGRYHFPTPTDRKLELTATEFAMILDGIDYSSAKRFTRYCRPKASESDLRTRTS
>NZ_CP053452.1|WP_171468866.1|1909966_1910314_-|hypothetical-protein
MPAVPAASRRDPAATRRRWAERLERFRRSGQTIAQFCAAEGVSPPSFYVWRRTLADHAPSPVPVTPTLVPIRLTPSPAGPPIEVVFPSGTVLRFPVDARPEVIAALVHAVEGRPC
>NZ_CP053452.1|WP_171468866.1|1913240_1913588_+|hypothetical-protein
MPAVPAASRRDPAATRRRWAERLERFRRSGQTIAQFCAAEGVSPPSFYVWRRTLADHAPSPVPVTPTLVPIRLTPSPAGPPIEVVFPSGTVLRFPVDARPEVIAALVHAVEGRPC
>NZ_CP053452.1|WP_171468900.1|1913581_1913959_+|IS66-family-insertion-sequence-element-accessory-protein-TnpB
MLSIPPTTQLWYGGAVDLRLGFDGLYRHVQSTLQADPLSGHLFIFTNRSANRLKALYWTRHGLCLWCQRLERGRYHFPTPTDRKLELTATEFAMILDGIDYSSAKRFTRYCRPKASESDLRTRTS
>NZ_CP053452.1|WP_171468899.1|1913972_1915529_+|IS66-family-transposase
MDSDAPLPTDVLTLQGMVRALQAENADLRTQLQRQAEQFQRTIDDLRAEVAALKAKLDRATTHRFGRRSERTPKPPKVPGDGPAKRRHDHGRSPLPAHLERRDTVLDLTPDERRCSGCGGDRVCIGQTQTEQLDCDPTPYFVRRTIRKTYACQQCPPTVRAEDRIRTATPSTVGPIDKGLCGPGLLAEVLVGKFLDHLPLHRQVARIGRAGVTVSESTLGDWVKQSAVLLTSLYQLMLERVRTCPVLWSDDTRSRFAQPGERTMPHGHFWVGIGDPTAPYTAFHFTTGYDAASGPDQFLGGFRGHVHADCLAQYNGLFAAGAKHVACWSHARRKFLGAGDPGAKAVERINRLYHIEHTLPAPDSPEHIVARRATRQARALPILNDLKAWLDAALGTALPKSALGAAIRYVANHWAAFVRYTEDGRLSIDNNLSERTLRLIAVGRSNWKFVGSAKAGAHAAVHFSVVGTCRHLGLDATAYLREVLPALHALGEKPTADQLAPLLPDVWAKRQQSRLLVA
>NZ_CP053452.1|WP_171468898.1|1915812_1917369_+|IS66-family-transposase
MGADSPLPNDVPTLQDLVRGLRAESAELRTQLRDQAQQFQRTIDELRAEVAALKAKLDRATTHRFGRRSERTPKPPKSPGDPTVKRRHDHGRASLPAHLPRRDTVLDLTPEERRCPGCGGDRVCIGQTQTEQLDCDPTPYFVRRTIRKTYACPQCPTTVPVEERIRTATPSTVGPINKGLCGPGVLAEVIVGKYLDHLPLHRQVARIARAGVTVAESTLGDWMKQSAVLLTPLYQLMLERVRACPVIWSDDTRSRFAKPGERTMPQGHFWVTIGDPTVPYTLFHFTTGYDAATGPDRFLGGFRGHVHADCLAQYNGLFANGAKHVACWAHARRKFLAAGDVATEAVEFIHRLYHLEHQLAPPDTPERIAARHATRQSQAVPVLNDLKAWLDAALVAALPKSAVAIAIRYVANHWAAFVRYTEDGRLSLDNNLSERTLRLIAVGRSNWKFVGSAKAGERSAVHYSVVGTCRHLGLDAAAYLRQVLPALHALGEKPTADQLEPLLPDVWAKRQQSRPLAA
>NZ_CP053452.1|WP_171468897.1|1917740_1918943_+|hypothetical-protein
MSECEKRWPRVSNTGKVGGGLLLGVAVALAVIGAETRGQDVKKPPAGSVDAGKKTGAKAGPLYGNQGGEKVLPADTREPNTVMRARREDSFFLIRNPRFGKEAGKEANGPKTLLLDYEVVARGKIGGGTLVLRDEDGIWGEAKLTTLANQGSGTIRLVGVQQIKGMFPPVPGGGGLPRRPQKNVDLPENFELYLVHGDDRYDPPLQFMVSNAAVMGKMTTTSRPRDWRADEIERYNRGPLAYKSPNEHPDVGVDVPRLPAPGGLQKFRYVDPNGRLLGLDYAVGSWENRKVVSALAPVYSDDQPQQHTARSIAREGYAVSGAEMNLDKYVCGIRLLFQRVKEDGTFDATDAYEGEWIGVPPGKGDPTKLVNDGRRVVGIHVQRVAIVDRFALVVTGKAKE
>NZ_CP053452.1|WP_171470229.1|1920466_1920979_+|hypothetical-protein
MCTPSQVCSDPRCMVAAAGWCVLSDLIQSVLGRGGGIGPEDLADLRQRVLLVVFRRRQPHEAPENLRGLAAAVARRARRDWFFHPPRRPIPWCEVVAEVADRSFDEADVNLRADLDLLADDARAVLVAVAIKGLTRREVAARLRLTSHEVRMLYREAVTFLARLWCIPGP
>NZ_CP053452.1|WP_171470230.1|1921071_1921839_+|hypothetical-protein
MQPPLPSSNTAPDGASARTTPAALEEPAGAVSGLNRKDAIAKPVYPALAAHQRAEEEWALHPVAVELDVWWTRLDGAFGLDIPRTPLRLEKDTRRNCFGYFRPGHNELGLKLEIALALDPHTDEAGLDWGELIGTLLHESGHLWQHLHGQQQSGTYGHHNKELRDRLRSCGLLVDYRGHQTYAPSSPFLDLLARYGVAPPRTMARPDGAPARKAGRSRKVQKLRKWSCGCQNARVGTRQFVASCGVCDRRFLPAV

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Crispr_ID: NZ_CP053452_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053452_10

1910415-1912691

Unclear

Consensus_repeat	Method
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	PILER-CR
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CRISPRCasFinder
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CRT

31 spacers

cas8u1,csb2gr5,cas7,cas3,cas2,cas1

The CRISPR arrays of NZ_CP053452_10

>merge|NZ_CP053452|10|1910415-1912691|PILER-CR,CRISPRCasFinder,CRT
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGGTGCCGCTCTTGGACTTCGTCGCTTTGGTGGACACGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGTACTTCTGCGGGATTTGTTTCATCGTCAGGTTCTAGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGTTACCTACCCTACCGGGTTTTTGTTTATACCTAAGAGGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGCCCTTAATGGCCGTCTCATTGTCCTTCCCTGCGTTCGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGATAGGAAAGCTATGGTAGTAGAAGAAGAGGTTAAGGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGCTCACTCGTAAAGAGTACAACGACCTTACTGAATTGGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGTCTTCATTGCCCATTTCTGGGTACTCCTATGATTCGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGGATCTTCAGCTCGGCCGCCAGGCGCTTGAGGTACCCGAGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGTGGATCGTCATCCTGTCCTCCCACCACGTAATGAGATGGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGTCTCATCGTACTCTTTTGCCTCACCAAACCACTGAGACGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGAGACCGTCGTGAGCCGGGTGGAGCGGCTGCTCCCGAGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGGCGAGAACGCCGGCGTCAAGGACCGGATGGGCAAGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGCCTTGGGCCGCGGCCGCGATCGCCGCAGCGCCATGTCGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGAGATTCCGGCCGCTGTGGGCGATCGCCTCGTTGAGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGGACGACCTGCGGCAGCCGCAGGTCATGCAGCCGGTGTGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGGTTGGAACTGTTGCGGTCGAGATGCCGGGCGGTTGGGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGGGTCACTGGATCCCCAGAACGCGCCCGCGGGATCGAGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGCTCGCTCTTCGCTTCGCTGATGGCGGCTTCGAGGATCGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGCCGTACACCACCGCGCGCTGGGCTGCCGTGAGCGTGGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGTTCATCACCTCTGAAGTGCCCGCGTCGCGCGAAGGTTGTAGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGCGCTCGCGTGAGTACCGTCGCCATCGGAATACCTCGTGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGCCCCACCGCTTGAGACGGTACGCCCGCAGTTGGCGAGGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGAGCAACTCATCGCCATCGGCCTCACGCCCGAGATGGCGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGGCGGACAGCGCTGGCAGGTGCGGGATCAGCGCGTGAAGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGGTGAGCGCGGCGACGATGGCGGCCGGGTTCAGGACGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGCGAACTCGGCGACGTGATTATCCCGTCCGCCGTCCTGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGGTGGCCGGTTCACTAGCACTCTGCTCTGCCGGGCGGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGCACGACGGGTGCGGCACGGAGGCGTGCGCGTGTGGGGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGCGTGCGGCCTGTTCGCCGCTCCTACACACACCTGAAGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGCTGCCGATCCCGAAGGCCGACGAGTCGGAGATCGAGGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGGAACCCGGAGAGGACCGTCAGCGGGGCCGACTGTCCGTGTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGC

>NZ_CP053452|10|2|1910415-1912691|PILER-CR
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GTGCCGCTCTTGGACTTCGTCGCTTTGGTGGACAC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TACTTCTGCGGGATTTGTTTCATCGTCAGGTTCTA
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TTACCTACCCTACCGGGTTTTTGTTTATACCTAAGAG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CCCTTAATGGCCGTCTCATTGTCCTTCCCTGCGTTC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	ATAGGAAAGCTATGGTAGTAGAAGAAGAGGTTAAG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CTCACTCGTAAAGAGTACAACGACCTTACTGAATTG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TCTTCATTGCCCATTTCTGGGTACTCCTATGATTC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GATCTTCAGCTCGGCCGCCAGGCGCTTGAGGTACCCGA
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TGGATCGTCATCCTGTCCTCCCACCACGTAATGAGATG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TCTCATCGTACTCTTTTGCCTCACCAAACCACTGAGAC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	AGACCGTCGTGAGCCGGGTGGAGCGGCTGCTCCCGA
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GCGAGAACGCCGGCGTCAAGGACCGGATGGGCAA
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CCTTGGGCCGCGGCCGCGATCGCCGCAGCGCCATGTC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	AGATTCCGGCCGCTGTGGGCGATCGCCTCGTTGA
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GACGACCTGCGGCAGCCGCAGGTCATGCAGCCGGTGT
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GTTGGAACTGTTGCGGTCGAGATGCCGGGCGGTTGG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GGTCACTGGATCCCCAGAACGCGCCCGCGGGATCGA
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CTCGCTCTTCGCTTCGCTGATGGCGGCTTCGAGGATC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CCGTACACCACCGCGCGCTGGGCTGCCGTGAGCGTG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TTCATCACCTCTGAAGTGCCCGCGTCGCGCGAAGGTTGTA
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CGCTCGCGTGAGTACCGTCGCCATCGGAATACCTCGT
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CCCCACCGCTTGAGACGGTACGCCCGCAGTTGGCGAG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	AGCAACTCATCGCCATCGGCCTCACGCCCGAGATGGC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GCGGACAGCGCTGGCAGGTGCGGGATCAGCGCGTGAA
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GTGAGCGCGGCGACGATGGCGGCCGGGTTCAGGAC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CGAACTCGGCGACGTGATTATCCCGTCCGCCGTCCT
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GTGGCCGGTTCACTAGCACTCTGCTCTGCCGGGCG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CACGACGGGTGCGGCACGGAGGCGTGCGCGTGTGGG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CGTGCGGCCTGTTCGCCGCTCCTACACACACCTGAA
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CTGCCGATCCCGAAGGCCGACGAGTCGGAGATCGAG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	AACCCGGAGAGGACCGTCAGCGGGGCCGACTGTCCGT
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGC

>NZ_CP053452|10|10|1910415-1912691|CRISPRCasFinder
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GTGCCGCTCTTGGACTTCGTCGCTTTGGTGGACAC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TACTTCTGCGGGATTTGTTTCATCGTCAGGTTCTA
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TTACCTACCCTACCGGGTTTTTGTTTATACCTAAGAG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CCCTTAATGGCCGTCTCATTGTCCTTCCCTGCGTTC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	ATAGGAAAGCTATGGTAGTAGAAGAAGAGGTTAAG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CTCACTCGTAAAGAGTACAACGACCTTACTGAATTG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TCTTCATTGCCCATTTCTGGGTACTCCTATGATTC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GATCTTCAGCTCGGCCGCCAGGCGCTTGAGGTACCCGA
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TGGATCGTCATCCTGTCCTCCCACCACGTAATGAGATG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TCTCATCGTACTCTTTTGCCTCACCAAACCACTGAGAC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	AGACCGTCGTGAGCCGGGTGGAGCGGCTGCTCCCGA
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GCGAGAACGCCGGCGTCAAGGACCGGATGGGCAA
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CCTTGGGCCGCGGCCGCGATCGCCGCAGCGCCATGTC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	AGATTCCGGCCGCTGTGGGCGATCGCCTCGTTGA
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GACGACCTGCGGCAGCCGCAGGTCATGCAGCCGGTGT
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GTTGGAACTGTTGCGGTCGAGATGCCGGGCGGTTGG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GGTCACTGGATCCCCAGAACGCGCCCGCGGGATCGA
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CTCGCTCTTCGCTTCGCTGATGGCGGCTTCGAGGATC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CCGTACACCACCGCGCGCTGGGCTGCCGTGAGCGTG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TTCATCACCTCTGAAGTGCCCGCGTCGCGCGAAGGTTGTA
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CGCTCGCGTGAGTACCGTCGCCATCGGAATACCTCGT
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CCCCACCGCTTGAGACGGTACGCCCGCAGTTGGCGAG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	AGCAACTCATCGCCATCGGCCTCACGCCCGAGATGGC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GCGGACAGCGCTGGCAGGTGCGGGATCAGCGCGTGAA
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GTGAGCGCGGCGACGATGGCGGCCGGGTTCAGGAC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CGAACTCGGCGACGTGATTATCCCGTCCGCCGTCCT
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GTGGCCGGTTCACTAGCACTCTGCTCTGCCGGGCG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CACGACGGGTGCGGCACGGAGGCGTGCGCGTGTGGG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CGTGCGGCCTGTTCGCCGCTCCTACACACACCTGAA
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CTGCCGATCCCGAAGGCCGACGAGTCGGAGATCGAG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	AACCCGGAGAGGACCGTCAGCGGGGCCGACTGTCCGT
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGC

>NZ_CP053452|10|2|1910415-1912691|CRT
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GTGCCGCTCTTGGACTTCGTCGCTTTGGTGGACAC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TACTTCTGCGGGATTTGTTTCATCGTCAGGTTCTA
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TTACCTACCCTACCGGGTTTTTGTTTATACCTAAGAG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CCCTTAATGGCCGTCTCATTGTCCTTCCCTGCGTTC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	ATAGGAAAGCTATGGTAGTAGAAGAAGAGGTTAAG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CTCACTCGTAAAGAGTACAACGACCTTACTGAATTG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TCTTCATTGCCCATTTCTGGGTACTCCTATGATTC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GATCTTCAGCTCGGCCGCCAGGCGCTTGAGGTACCCGA
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TGGATCGTCATCCTGTCCTCCCACCACGTAATGAGATG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TCTCATCGTACTCTTTTGCCTCACCAAACCACTGAGAC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	AGACCGTCGTGAGCCGGGTGGAGCGGCTGCTCCCGA
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GCGAGAACGCCGGCGTCAAGGACCGGATGGGCAA
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CCTTGGGCCGCGGCCGCGATCGCCGCAGCGCCATGTC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	AGATTCCGGCCGCTGTGGGCGATCGCCTCGTTGA
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GACGACCTGCGGCAGCCGCAGGTCATGCAGCCGGTGT
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GTTGGAACTGTTGCGGTCGAGATGCCGGGCGGTTGG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GGTCACTGGATCCCCAGAACGCGCCCGCGGGATCGA
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CTCGCTCTTCGCTTCGCTGATGGCGGCTTCGAGGATC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CCGTACACCACCGCGCGCTGGGCTGCCGTGAGCGTG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	TTCATCACCTCTGAAGTGCCCGCGTCGCGCGAAGGTTGTA
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CGCTCGCGTGAGTACCGTCGCCATCGGAATACCTCGT
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CCCCACCGCTTGAGACGGTACGCCCGCAGTTGGCGAG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	AGCAACTCATCGCCATCGGCCTCACGCCCGAGATGGC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GCGGACAGCGCTGGCAGGTGCGGGATCAGCGCGTGAA
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GTGAGCGCGGCGACGATGGCGGCCGGGTTCAGGAC
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CGAACTCGGCGACGTGATTATCCCGTCCGCCGTCCT
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	GTGGCCGGTTCACTAGCACTCTGCTCTGCCGGGCG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CACGACGGGTGCGGCACGGAGGCGTGCGCGTGTGGG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CGTGCGGCCTGTTCGCCGCTCCTACACACACCTGAA
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	CTGCCGATCCCGAAGGCCGACGAGTCGGAGATCGAG
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGG	AACCCGGAGAGGACCGTCAGCGGGGCCGACTGTCCGT
GTTCTCCACGGCTCACCGCCGTGGCCGAATTGAAGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053452.1\|WP_171470232.1\|1922795_1923059_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171468897.1\|1917740_1918943_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171470230.1\|1921071_1921839_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171470225.1\|1897794_1899969_+\|type-I-U-CRISPR-associated-protein-Csx17	cas8u1	cd09767_cas8u1_CAS-I-U	gnl\|CDD\|274989
NZ_CP053452.1\|WP_171470226.1\|1899974_1901060_+\|type-I-U-CRISPR-associated-protein-Cas7	cas7	cd09678_cas7_CAS-I-U	gnl\|CDD\|378223
NZ_CP053452.1\|WP_171470233.1\|1923085_1923301_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171470227.1\|1901066_1902677_+\|type-I-U-CRISPR-associated-protein-Cas5/Cas6	csb2gr5	pfam09609_csb2gr5_CAS-I-U	gnl\|CDD\|320705
NZ_CP053452.1\|WP_171470223.1\|1895123_1895408_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP053452.1\|WP_171470222.1\|1893402_1895124_+\|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|376633
NZ_CP053452.1\|WP_171468866.1\|1913240_1913588_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171470229.1\|1920466_1920979_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274357
NZ_CP053452.1\|WP_171468899.1\|1913972_1915529_+\|IS66-family-transposase	unknown	unknown	gnl\|CDD\|376980
NZ_CP053452.1\|WP_171468899.1\|1908025_1909582_-\|IS66-family-transposase	unknown	unknown	gnl\|CDD\|376980
NZ_CP053452.1\|WP_171470228.1\|1902839_1903655_+\|hypothetical-protein	cas8u1	mkCas0114_cas8u1_CAS-I-U	unknown
NZ_CP053452.1\|WP_171468898.1\|1915812_1917369_+\|IS66-family-transposase	unknown	unknown	gnl\|CDD\|376980
NZ_CP053452.1\|WP_171468900.1\|1909595_1909973_-\|IS66-family-insertion-sequence-element-accessory-protein-TnpB	unknown	unknown	gnl\|CDD\|377551
NZ_CP053452.1\|WP_171470224.1\|1895404_1897798_+\|CRISPR-associated-helicase-Cas3'	cas3	cd09696_cas3_CAS-I-U	gnl\|CDD\|274235
NZ_CP053452.1\|WP_171470231.1\|1921956_1922766_+\|ParB-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|272946
NZ_CP053452.1\|WP_171468900.1\|1913581_1913959_+\|IS66-family-insertion-sequence-element-accessory-protein-TnpB	unknown	unknown	gnl\|CDD\|377551
NZ_CP053452.1\|WP_171468866.1\|1909966_1910314_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP053452.1\|WP_171470225.1\|1897794_1899969_+\|type-I-U-CRISPR-associated-protein-Csx17	gnl\|CDD\|274989	TIGR04113, hypothetical_protein_AaLAA1DRAFT_1703, CRISPR-associated protein Csx17, subtype Dpsyc. Members of this protein family are found exclusively in CRISPR-associated (cas) type I system gene clusters of the Dpsyc subtype. Markers for that type include a variant form of cas3 (model TIGR02621) and the GSU0054-like protein family (model TIGR02165). This family occurs in less than half of known Dpsyc clusters.	0
NZ_CP053452.1\|WP_171470226.1\|1899974_1901060_+\|type-I-U-CRISPR-associated-protein-Cas7	gnl\|CDD\|378223	pfam09617, Cas_GSU0053, CRISPR-associated protein GSU0053 (Cas_GSU0053). This entry is found in CRISPR-associated (cas) proteins in the genomes of Geobacter sulfurreducens PCA and Desulfotalea psychrophila LSv54 (both Desulfobacterales from the Deltaproteobacteria), Gemmata obscuriglobus (a Planctomycete), and Actinomyces naeslundii MG1 (Actinobacteria).	5.46677e-42
NZ_CP053452.1\|WP_171470227.1\|1901066_1902677_+\|type-I-U-CRISPR-associated-protein-Cas5/Cas6	gnl\|CDD\|320705	cd09734, Csb2_I-U, CRISPR/Cas system-associated protein Csb2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Duplicated RAMP domains; also known as GSU0054 family.	1.45076e-36
NZ_CP053452.1\|WP_171470223.1\|1895123_1895408_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	4.84418e-25
NZ_CP053452.1\|WP_171470222.1\|1893402_1895124_+\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	3.72652e-121
NZ_CP053452.1\|WP_171470231.1\|1921956_1922766_+\|ParB-N-terminal-domain-containing-protein	gnl\|CDD\|272946	TIGR00180, Probable_chromosome-partitioning_protein_ParB, ParB/RepB/Spo0J family partition protein. This model represents the most well-conserved core of a set of chromosomal and plasmid partition proteins related to ParB, including Spo0J, RepB, and SopB. Spo0J has been shown to bind a specific DNA sequence that, when introduced into a plasmid, can serve as partition site. Study of RepB, which has nicking-closing activity, suggests that it forms a transient protein-DNA covalent intermediate during the strand transfer reaction.	1.47562e-10
NZ_CP053452.1\|WP_171470229.1\|1920466_1920979_+\|hypothetical-protein	gnl\|CDD\|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	4.02492e-07
NZ_CP053452.1\|WP_171468899.1\|1913972_1915529_+\|IS66-family-transposase	gnl\|CDD\|376980	pfam03050, DDE_Tnp_IS66, Transposase IS66 family. Transposase proteins are necessary for efficient DNA transposition. This family includes IS66 from Agrobacterium tumefaciens.	3.24166e-90
NZ_CP053452.1\|WP_171468899.1\|1908025_1909582_-\|IS66-family-transposase	gnl\|CDD\|376980	pfam03050, DDE_Tnp_IS66, Transposase IS66 family. Transposase proteins are necessary for efficient DNA transposition. This family includes IS66 from Agrobacterium tumefaciens.	3.24166e-90
NZ_CP053452.1\|WP_171470224.1\|1895404_1897798_+\|CRISPR-associated-helicase-Cas3'	gnl\|CDD\|274235	TIGR02621, CRISPR-associated_helicase_Cas3, CRISPR-associated helicase Cas3, subtype Dpsyc. This model describes a CRISPR-associated putative DEAH-box helicase, or Cas3, of a subtype found in Actinomyces naeslundii MG1, Geobacter sulfurreducens PCA, Gemmata obscuriglobus UQM 2246, and Desulfotalea psychrophila. This protein includes both DEAH and HD motifs.	7.03033e-58
NZ_CP053452.1\|WP_171468898.1\|1915812_1917369_+\|IS66-family-transposase	gnl\|CDD\|376980	pfam03050, DDE_Tnp_IS66, Transposase IS66 family. Transposase proteins are necessary for efficient DNA transposition. This family includes IS66 from Agrobacterium tumefaciens.	6.71559e-93
NZ_CP053452.1\|WP_171468900.1\|1909595_1909973_-\|IS66-family-insertion-sequence-element-accessory-protein-TnpB	gnl\|CDD\|377551	pfam05717, TnpB_IS66, IS66 Orf2 like protein. This protein is found in insertion sequences related to IS66. The function of these proteins is uncertain, but they are probably essential for transposition.	2.4029e-39
NZ_CP053452.1\|WP_171468900.1\|1913581_1913959_+\|IS66-family-insertion-sequence-element-accessory-protein-TnpB	gnl\|CDD\|377551	pfam05717, TnpB_IS66, IS66 Orf2 like protein. This protein is found in insertion sequences related to IS66. The function of these proteins is uncertain, but they are probably essential for transposition.	2.4029e-39

>NZ_CP053452.1|WP_171468866.1|1909966_1910314_-|hypothetical-protein
MPAVPAASRRDPAATRRRWAERLERFRRSGQTIAQFCAAEGVSPPSFYVWRRTLADHAPSPVPVTPTLVPIRLTPSPAGPPIEVVFPSGTVLRFPVDARPEVIAALVHAVEGRPC
>NZ_CP053452.1|WP_171468900.1|1909595_1909973_-|IS66-family-insertion-sequence-element-accessory-protein-TnpB
MLSIPPTTQLWYGGAVDLRLGFDGLYRHVQSTLQADPLSGHLFIFTNRSANRLKALYWTRHGLCLWCQRLERGRYHFPTPTDRKLELTATEFAMILDGIDYSSAKRFTRYCRPKASESDLRTRTS
>NZ_CP053452.1|WP_171468899.1|1908025_1909582_-|IS66-family-transposase
MDSDAPLPTDVLTLQGMVRALQAENADLRTQLQRQAEQFQRTIDDLRAEVAALKAKLDRATTHRFGRRSERTPKPPKVPGDGPAKRRHDHGRSPLPAHLERRDTVLDLTPDERRCSGCGGDRVCIGQTQTEQLDCDPTPYFVRRTIRKTYACQQCPPTVRAEDRIRTATPSTVGPIDKGLCGPGLLAEVLVGKFLDHLPLHRQVARIGRAGVTVSESTLGDWVKQSAVLLTSLYQLMLERVRTCPVLWSDDTRSRFAQPGERTMPHGHFWVGIGDPTAPYTAFHFTTGYDAASGPDQFLGGFRGHVHADCLAQYNGLFAAGAKHVACWSHARRKFLGAGDPGAKAVERINRLYHIEHTLPAPDSPEHIVARRATRQARALPILNDLKAWLDAALGTALPKSALGAAIRYVANHWAAFVRYTEDGRLSIDNNLSERTLRLIAVGRSNWKFVGSAKAGAHAAVHFSVVGTCRHLGLDATAYLREVLPALHALGEKPTADQLAPLLPDVWAKRQQSRLLVA
>NZ_CP053452.1|WP_171470228.1|1902839_1903655_+|hypothetical-protein
MSWGRHRSPTVPVLHLPGPPPSPTDVDAYLASRLAKSVEDHPSAWVVEMLERGLGKDATRDFSDIKRHAVPPVHADRHRLDWVTALSCESAIDADRQLQKVRCDYLIGNLKSLLAGAGADHLRRTLFDTWDYADGRSNQSLHGEPSEDRRHAYQWHQPNGDPTRKRRGGMLGANRLALEAWPLFPSFPDGPDRVRTRGFRGNRAGSTFWLWPLWSSCLTPDAVASILSVPNLQSSAGDTDSVRCLGVTAVYRSQRILVGKTPNLTPADAIV
>NZ_CP053452.1|WP_171470227.1|1901066_1902677_+|type-I-U-CRISPR-associated-protein-Cas5/Cas6
MPVTLKLTFPGGRYHATPWGRHVNEGVAEWPLSPWRLLRAFVATWKRKCADLSEEQVRRVLAPLLPAPKFHLPPARVAHTRHYMPWEKKGPADHTLVFDTFVSIGRNDPLFVHWADANLNPEEAAALTRLADNLTTLGRAEGWVQVEVTSETADWNCEPKAQSTSIEELVPVFCPDPATAFGDEHYPPKPDAKALKKGLKPGDLLFDCPRWHLCLDTETIHGERWPRVPGSAWVSYARPANAFTRRTAPAAPPARAARLPTVARFLLDGPVLPFVTNTIRVAEAFRLAAMGRFGAWCRQHQREGVEFCRTDQPDKFSSPTLSGKHLNGEMRADHGHAHYLPTAEGDDTRRLTHLTVYAENGFGPGEVAALTAVREFEVPAGGGRMQPLRTQLVGLGTRDLFRTAVPLFGASAVWRSVTPFVAHRHPKRRGSKRDAPLVMGPDGRQSFAELAVRELVARREIAPLTGVEPIEVFDGGTRSVEFERGRARPGDDGRSRSHAGFRLTFANRVSGPVSLGYACHYGLGLFVPDRTERSGD
>NZ_CP053452.1|WP_171470226.1|1899974_1901060_+|type-I-U-CRISPR-associated-protein-Cas7
MPVDLEALKSAPRILIEAALKPVAGTRIQPTGFPDLGPATYQDADDVPTLLVESAQSMANRLEAVCWDEGANAIATELEGLSYVNVKLAGLGDGTDTTNSLQEFHRLNSPYIMSGKTADGKAFADVLKPELGLASVAGAGKKATKKKDDTATADEPAATEKEPDDVAGVVNLRKLATVCFKYDPNSLVHGVFLEKIAGRLRHPRALSAFIEATGVGRADSGGVKFDRALPKPKVAGLDAKGGYGNVPFHRTEFTAKAITAFFSFDLSQIRGYGLPADATALLTVLSLWKVRKFLDSNMRLRSACELELAEGDKSIVVKRPLDSFKLPTADDLAAELKKLINKCKDLFAKPVVTELTWKAKE
>NZ_CP053452.1|WP_171470225.1|1897794_1899969_+|type-I-U-CRISPR-associated-protein-Csx17
MSVVELPGCTPEPLMSYLKALGVFRLIADQADSSARGCWRGGRFVLETTLSRDSLVKFFSEQFHPSPILAPWNGGSGFYGGGSDPLNAIAHSTNSRLTLYRDTIAAVRQIAPAGKPKDEDKASLLVRCRAALSDEVVPWLDTCFVLGEEGPGYFPLLGTGGNDGRLDFTNNFMQRLADVIAFTAGVPAPAASKGWLASALFANDPALTAYEKAAVGQFNPGGIGGANGVQGNFEANSRVNPWDFVLMIEGALLFAGSVARRLGATVGDRAVFPFTVNSVAVGYGSATASEETTDGSRAELWLPLWDEPARFAEIRQLFGEGRAQVNRRQAKNSIEFALAVNLLGVSRGVTEFSRYGFLKRNGLAFLAAPLGRVPVNPRPAARLLEEAPLRDWLDRLRLACREKDKTPARYQTALRDIDRAIFEFATRSELGELADHRGLLDVLRAVGRAEHTLAGGLAFCKDKYLKPLQGLSVQWLEQANDGSPEFALAASVAGISESKGVGPLRVFLEEVEAKGAYFNWSPGSTSSVWSKRSLTDNLAAVFRRRQMEAFRTGQSGLPLKSPRPASLESLFHFLAEHTDDEKLHDLLWGLSAIDWNTVEDFKLPAVPAPDLAIPFEFGVPRLLVSPFATTDGGETTTPDQDVFHALASGRGDAVSQCVDRAAKRLKSSGLLVNGYRNRYRAGASLGVASAIQPARLLAAMLFPLSDRDLMRIANAVLYPPETQE
>NZ_CP053452.1|WP_171470224.1|1895404_1897798_+|CRISPR-associated-helicase-Cas3'
MTTWKSFVEFFQAATGGRDPYPYQSRFADASTLPHLLRAPTGAGKTATAVLGWLWRWKTKPKETPRRLVYCLPMRVLVEQSYHEAEAWLKSLELSNDICLPLPLMGGSDSGDWHLTPEKPAILIGTQDMLLSRALNRGYAATRFHWPIEFGLLNNDCLWIFDEPQLMASGVSTSAQLAGLRHSLKTFGECRSVWMSATLEPNWLDTVDFRGKFPAAPMELAATDYATPALDRRMTASKTLGRLNAAVSKDMKDVAKEVLRLHKEAGEAQTLVVLNTVDRAKAVFAALQDLRKKSELPKLLLVHSRFRPHERGELNRLLQEKGEAAKDRIIVATQVVEAGVDISARTLVTELAPWASAVQRIGRCNRTGDDGPGRVYWIDLDEEKQGMPYEVTDLTFARKQLNALDGKDVSPKALDDFKTQNKIMLPFAHKHVLRRRDLLDLFDTSPDLSGNDIDVSRFVRSDDPDTDVQVFWRAVDSTGPTADEPDEHRAELCNVPIGQARDFLSKIAEQKLSGFVWDHIDREWVKLDPRQVRPALTILLPVAAGGYHTELGWTGDTKNAVAALPPDLARAARKEATDSDSNCETPHPRTIAQHTEGVCKAVDSILGAVDALLPNGWPERLQTAARWHDVGKGHDAFQIGMRRANPGLVAGTLWAKSGVSVRLRHGRKYFRHELASALVALQSGQSFEIAYLILAHHGKARLSIRALPKEDMPDDPKTLFALGVHDGDTLPSVDLGGVTFSGIKLDLSPMQLGGDSWTARALKLLEELGPFKLAYLEALLRAADQRVSNAERRRESP
>NZ_CP053452.1|WP_171470223.1|1895123_1895408_+|CRISPR-associated-endonuclease-Cas2
MDSYLVCYDISNPKRLRKVARTCEDFGYRKQFSVFLVRVSPTDFVRLRSRLYDIINLDEDQVLFIPLTESALQRTEAIGRPTDAYNKHDVVIIL
>NZ_CP053452.1|WP_171470222.1|1893402_1895124_+|CRISPR-associated-endonuclease-Cas1
MSATTDPIPVRALNQVTYCPRLYFLQYVDCVMPVNEHVEGGLFDHRRVDSGDLKNKTRTDRGTATSRGIALSSEALGISGILDVIEEKNGEQYPVETKHGKAPHDDDGKPTIWDNDAVQLCAQALLMEEAFGQPVPRGYQFHAGSRERVPLEFTDALRQKTQAAITRCRELQVLDAPPEPLPAELRHRCFGCSLASVCQPEEILYQIGHPNPADADAPSAKTLPDVRLVIPRSDNGAVLYLQEPGSSVGKRSEHLVIKKDGKEMNRVPLHAVRQVVVCGNVQVSTQALETMAENEIGVSYVTGHGRFIGSFVPAPAKNVSLREAQFRKFSDPAACLELSKSVVRAKLANQRTLLMRTLRGEEEARGSHEPAAKGIYGLLAGLDRVTSVESVLGTEGQGAALYFGEFGRFLKQPPTGKGFDFTTRNRRPPRDPVNALLSFAYAMLAKDCFAAVCTVGFDPYKGFFHQGRHGKPSLALDLMEEFRPVIADSVVLTLINNESLTPADFIIWRDACNLTDAGRKAFFAAYEQRKSAEVTHPVYGYRMSYARMLEVQARMLAAFVRGEIPTYTGFMVR
>NZ_CP053452.1|WP_171468866.1|1913240_1913588_+|hypothetical-protein
MPAVPAASRRDPAATRRRWAERLERFRRSGQTIAQFCAAEGVSPPSFYVWRRTLADHAPSPVPVTPTLVPIRLTPSPAGPPIEVVFPSGTVLRFPVDARPEVIAALVHAVEGRPC
>NZ_CP053452.1|WP_171468900.1|1913581_1913959_+|IS66-family-insertion-sequence-element-accessory-protein-TnpB
MLSIPPTTQLWYGGAVDLRLGFDGLYRHVQSTLQADPLSGHLFIFTNRSANRLKALYWTRHGLCLWCQRLERGRYHFPTPTDRKLELTATEFAMILDGIDYSSAKRFTRYCRPKASESDLRTRTS
>NZ_CP053452.1|WP_171468899.1|1913972_1915529_+|IS66-family-transposase
MDSDAPLPTDVLTLQGMVRALQAENADLRTQLQRQAEQFQRTIDDLRAEVAALKAKLDRATTHRFGRRSERTPKPPKVPGDGPAKRRHDHGRSPLPAHLERRDTVLDLTPDERRCSGCGGDRVCIGQTQTEQLDCDPTPYFVRRTIRKTYACQQCPPTVRAEDRIRTATPSTVGPIDKGLCGPGLLAEVLVGKFLDHLPLHRQVARIGRAGVTVSESTLGDWVKQSAVLLTSLYQLMLERVRTCPVLWSDDTRSRFAQPGERTMPHGHFWVGIGDPTAPYTAFHFTTGYDAASGPDQFLGGFRGHVHADCLAQYNGLFAAGAKHVACWSHARRKFLGAGDPGAKAVERINRLYHIEHTLPAPDSPEHIVARRATRQARALPILNDLKAWLDAALGTALPKSALGAAIRYVANHWAAFVRYTEDGRLSIDNNLSERTLRLIAVGRSNWKFVGSAKAGAHAAVHFSVVGTCRHLGLDATAYLREVLPALHALGEKPTADQLAPLLPDVWAKRQQSRLLVA
>NZ_CP053452.1|WP_171468898.1|1915812_1917369_+|IS66-family-transposase
MGADSPLPNDVPTLQDLVRGLRAESAELRTQLRDQAQQFQRTIDELRAEVAALKAKLDRATTHRFGRRSERTPKPPKSPGDPTVKRRHDHGRASLPAHLPRRDTVLDLTPEERRCPGCGGDRVCIGQTQTEQLDCDPTPYFVRRTIRKTYACPQCPTTVPVEERIRTATPSTVGPINKGLCGPGVLAEVIVGKYLDHLPLHRQVARIARAGVTVAESTLGDWMKQSAVLLTPLYQLMLERVRACPVIWSDDTRSRFAKPGERTMPQGHFWVTIGDPTVPYTLFHFTTGYDAATGPDRFLGGFRGHVHADCLAQYNGLFANGAKHVACWAHARRKFLAAGDVATEAVEFIHRLYHLEHQLAPPDTPERIAARHATRQSQAVPVLNDLKAWLDAALVAALPKSAVAIAIRYVANHWAAFVRYTEDGRLSLDNNLSERTLRLIAVGRSNWKFVGSAKAGERSAVHYSVVGTCRHLGLDAAAYLRQVLPALHALGEKPTADQLEPLLPDVWAKRQQSRPLAA
>NZ_CP053452.1|WP_171468897.1|1917740_1918943_+|hypothetical-protein
MSECEKRWPRVSNTGKVGGGLLLGVAVALAVIGAETRGQDVKKPPAGSVDAGKKTGAKAGPLYGNQGGEKVLPADTREPNTVMRARREDSFFLIRNPRFGKEAGKEANGPKTLLLDYEVVARGKIGGGTLVLRDEDGIWGEAKLTTLANQGSGTIRLVGVQQIKGMFPPVPGGGGLPRRPQKNVDLPENFELYLVHGDDRYDPPLQFMVSNAAVMGKMTTTSRPRDWRADEIERYNRGPLAYKSPNEHPDVGVDVPRLPAPGGLQKFRYVDPNGRLLGLDYAVGSWENRKVVSALAPVYSDDQPQQHTARSIAREGYAVSGAEMNLDKYVCGIRLLFQRVKEDGTFDATDAYEGEWIGVPPGKGDPTKLVNDGRRVVGIHVQRVAIVDRFALVVTGKAKE
>NZ_CP053452.1|WP_171470229.1|1920466_1920979_+|hypothetical-protein
MCTPSQVCSDPRCMVAAAGWCVLSDLIQSVLGRGGGIGPEDLADLRQRVLLVVFRRRQPHEAPENLRGLAAAVARRARRDWFFHPPRRPIPWCEVVAEVADRSFDEADVNLRADLDLLADDARAVLVAVAIKGLTRREVAARLRLTSHEVRMLYREAVTFLARLWCIPGP
>NZ_CP053452.1|WP_171470230.1|1921071_1921839_+|hypothetical-protein
MQPPLPSSNTAPDGASARTTPAALEEPAGAVSGLNRKDAIAKPVYPALAAHQRAEEEWALHPVAVELDVWWTRLDGAFGLDIPRTPLRLEKDTRRNCFGYFRPGHNELGLKLEIALALDPHTDEAGLDWGELIGTLLHESGHLWQHLHGQQQSGTYGHHNKELRDRLRSCGLLVDYRGHQTYAPSSPFLDLLARYGVAPPRTMARPDGAPARKAGRSRKVQKLRKWSCGCQNARVGTRQFVASCGVCDRRFLPAV
>NZ_CP053452.1|WP_171470231.1|1921956_1922766_+|ParB-N-terminal-domain-containing-protein
MAALRLHTVPLTACDIAFNPRSARDPDYCRSLGENIRMNGQQVPLIGFYQVERFQVADGGCRVVGMQLAGLTEALALDLGKQPTAAELLMAQASVDLYKEFLPPLDRAQLYRSLLDARGCTAVQLAHDLCVSDSTVGKYLSLLTLPANLQQQINAGTLEFSKACVLAQEPDPVRQLELAMAAPNLSRTALARLAMKGRRAKATSEKFSKVRCQLVNGTIVTVSGAGLDWEGLIDAISAALDYARKAHRDSLDIKTAEKVWKERASGKKV
>NZ_CP053452.1|WP_171470232.1|1922795_1923059_+|hypothetical-protein
MVQFNPADPLLRLTFIVCCVVFTIAFFVEVGSYLVWCVRVIEKIRERRHQRVLELLDRQLAADKLKWAAREDIPLPPIPEPPHERKT
>NZ_CP053452.1|WP_171470233.1|1923085_1923301_+|hypothetical-protein
MLLSLVVVICVFVGATGFFLHVFNTVIWSLRALDGIRERKHQRVLELLDKQIVADKAKWPAAEQAPLPVSE

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Crispr_ID: NZ_CP053452_11

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053452_11

1983020-1983092

Orphan

Consensus_repeat	Method
TCGCGAGCGGCGCGGCGTGAGCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP053452_11

>merge|NZ_CP053452|11|1983020-1983092|CRISPRCasFinder
TCGCGAGCGGCGCGGCGTGAGCCCGCCGGTGAAAGAAGAAAGTATGGCGGTCGCGAGCGGCGCGGCGTGGGCC

>NZ_CP053452|11|11|1983020-1983092|CRISPRCasFinder
TCGCGAGCGGCGCGGCGTGAGCC	CGCCGGTGAAAGAAGAAAGTATGGCGG
TCGCGAGCGGCGCGGCGTGGGCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053452.1\|WP_171470282.1\|1972741_1973731_+\|CoA-transferase-subunit-A	unknown	unknown	gnl\|CDD\|224702
NZ_CP053452.1\|WP_171470294.1\|1987758_1988391_-\|Fe(2+)-trafficking-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP053452.1\|WP_171470286.1\|1979608_1980187_-\|redoxin-domain-containing-protein	unknown	unknown	gnl\|CDD\|239268
NZ_CP053452.1\|WP_171470289.1\|1982360_1983011_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274347
NZ_CP053452.1\|WP_171470292.1\|1986036_1986456_-\|exosortase/archaeosortase-family-protein	unknown	unknown	gnl\|CDD\|378248
NZ_CP053452.1\|WP_171470299.1\|1992385_1993024_-\|aminoacyl-tRNA-hydrolase	unknown	unknown	gnl\|CDD\|235457
NZ_CP053452.1\|WP_171470291.1\|1985524_1986151_-\|exosortase/archaeosortase-family-protein	unknown	unknown	gnl\|CDD\|378248
NZ_CP053452.1\|WP_171470296.1\|1990079_1990655_-\|50S-ribosomal-protein-L9	unknown	unknown	gnl\|CDD\|234659
NZ_CP053452.1\|WP_171470283.1\|1973816_1975448_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171475988.1\|1975514_1975784_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171470281.1\|1972114_1972543_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|215573
NZ_CP053452.1\|WP_171470295.1\|1988546_1989353_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171470285.1\|1977632_1979117_-\|cytochrome-C-peroxidase	unknown	unknown	gnl\|CDD\|376999
NZ_CP053452.1\|WP_171470288.1\|1981427_1982162_-\|sugar-transferase	unknown	unknown	gnl\|CDD\|376775
NZ_CP053452.1\|WP_171470298.1\|1991568_1992084_-\|30S-ribosomal-protein-S6	unknown	unknown	gnl\|CDD\|275385
NZ_CP053452.1\|WP_171470297.1\|1990759_1991311_-\|single-stranded-DNA-binding-protein	unknown	unknown	gnl\|CDD\|366099
NZ_CP053452.1\|WP_171470284.1\|1976414_1977203_-\|DUF480-domain-containing-protein	unknown	unknown	gnl\|CDD\|377312
NZ_CP053452.1\|WP_171470287.1\|1980183_1981212_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133016
NZ_CP053452.1\|WP_171470293.1\|1986891_1987563_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377368
NZ_CP053452.1\|WP_171470290.1\|1983137_1985399_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|349772

Protein	Function_ID	Function_description	E-value
NZ_CP053452.1\|WP_171470282.1\|1972741_1973731_+\|CoA-transferase-subunit-A	gnl\|CDD\|224702	COG1788, AtoD, Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit [Lipid metabolism].	1.55574e-48
NZ_CP053452.1\|WP_171470294.1\|1987758_1988391_-\|Fe(2+)-trafficking-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	6.55458e-14
NZ_CP053452.1\|WP_171470286.1\|1979608_1980187_-\|redoxin-domain-containing-protein	gnl\|CDD\|239268	cd02970, PRX_like2, Peroxiredoxin (PRX)-like 2 family; hypothetical proteins that show sequence similarity to PRXs. Members of this group contain a CXXC motif, similar to TRX. The second cysteine in the motif corresponds to the peroxidatic cysteine of PRX, however, these proteins do not contain the other two residues of the catalytic triad of PRX. PRXs confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF. TRXs alter the redox state of target proteins by catalyzing the reduction of their disulfide bonds via the CXXC motif using reducing equivalents derived from either NADPH or ferredoxins.	1.94823e-19
NZ_CP053452.1\|WP_171470289.1\|1982360_1983011_-\|hypothetical-protein	gnl\|CDD\|274347	TIGR02914, hypothetical_protein, EpsI family protein. In Methylobacillus sp strain 12S, EpsI is encoded immediately downstream of the multiple-membrane-spanning putative transporter EpsH, and is predicted to be a periplasmic protein involved in, but not required for, expression of the exopolysaccharide methanolan. In a number of other species, protein homologous to EpsI is encoded either next to EpsH or, more often, combined in a fused gene. We have proposed renaming EpsH, or the EpsHI fusion protein, to exosortase, based on its phylogenetic association with the PEP-CTERM proposed protein targeting signal. [Transport and binding proteins, Unknown substrate].	0.00491969
NZ_CP053452.1\|WP_171470292.1\|1986036_1986456_-\|exosortase/archaeosortase-family-protein	gnl\|CDD\|378248	pfam09721, Exosortase_EpsH, Transmembrane exosortase (Exosortase_EpsH). Members of this family are designated exosortase, analogous to sortase in cell wall sorting mediated by LPXTG domains in Gram-positive bacteria. The phylogenetic distribution of the proteins in this entry is nearly perfectly correlated with the distribution of the proteins having the PEP-CTERM anchor motif, IPR013424. Members of this entry are integral membrane proteins with eight predicted transmembrane helices in common. Some members of this family have long trailing sequences past the region described by this model. This model does not include the region of the first predicted transmembrane region. The best characterized member is EpsH of Methylobacillus sp. 12S, where it is part of a locus associated with biosynthesis of the exopolysaccharide methanol-an.	4.00368e-08
NZ_CP053452.1\|WP_171470299.1\|1992385_1993024_-\|aminoacyl-tRNA-hydrolase	gnl\|CDD\|235457	PRK05426, PRK05426, peptidyl-tRNA hydrolase; Provisional.	1.79347e-100
NZ_CP053452.1\|WP_171470291.1\|1985524_1986151_-\|exosortase/archaeosortase-family-protein	gnl\|CDD\|378248	pfam09721, Exosortase_EpsH, Transmembrane exosortase (Exosortase_EpsH). Members of this family are designated exosortase, analogous to sortase in cell wall sorting mediated by LPXTG domains in Gram-positive bacteria. The phylogenetic distribution of the proteins in this entry is nearly perfectly correlated with the distribution of the proteins having the PEP-CTERM anchor motif, IPR013424. Members of this entry are integral membrane proteins with eight predicted transmembrane helices in common. Some members of this family have long trailing sequences past the region described by this model. This model does not include the region of the first predicted transmembrane region. The best characterized member is EpsH of Methylobacillus sp. 12S, where it is part of a locus associated with biosynthesis of the exopolysaccharide methanol-an.	2.36098e-36
NZ_CP053452.1\|WP_171470296.1\|1990079_1990655_-\|50S-ribosomal-protein-L9	gnl\|CDD\|234659	PRK00137, rplI, 50S ribosomal protein L9; Reviewed.	1.12379e-33
NZ_CP053452.1\|WP_171470288.1\|1981427_1982162_-\|sugar-transferase	gnl\|CDD\|376775	pfam02397, Bac_transf, Bacterial sugar transferase. This Pfam family represents a conserved region from a number of different bacterial sugar transferases, involved in diverse biosynthesis pathways.	1.0553e-72
NZ_CP053452.1\|WP_171470298.1\|1991568_1992084_-\|30S-ribosomal-protein-S6	gnl\|CDD\|275385	cd00473, bS6, Bacterial ribosomal protein S6. bS6 is one of the components of the small subunit of the prokaryotic ribosome, a ribonucleoprotein organelle that decodes the genetic information in messenger RNA and forms peptide bonds to synthesize the corresponding polypeptides. Ribosomes consist of a large and a small subunit, which assemble during the initiation stage of protein synthesis. Prokaryotic ribosomes consist of three molecules of RNA and more than 50 proteins. The small subunits of bacterial and eukaryotic ribosomes have the same overall shapes (with structural elements described as head, body, platform, beak and shoulder). The bacterial ribosomal protein S6 is important for the assembly of the central domain of the small subunit via heterodimerization with ribosomal protein S18.	6.06329e-19
NZ_CP053452.1\|WP_171470281.1\|1972114_1972543_+\|hypothetical-protein	gnl\|CDD\|215573	PLN03098, LPA1, LOW PSII ACCUMULATION1; Provisional.	5.53526e-07
NZ_CP053452.1\|WP_171470285.1\|1977632_1979117_-\|cytochrome-C-peroxidase	gnl\|CDD\|376999	pfam03150, CCP_MauG, Di-haem cytochrome c peroxidase. This is a family of distinct cytochrome c peroxidases (CCPs) that contain two haem groups. Similar to other cytochrome c peroxidases, they reduce hydrogen peroxide to water using c-type haem as an oxidisable substrate. However, since they possess two, instead of one, haem prosthetic groups, bacterial CCPs reduce hydrogen peroxide without the need to generate semi-stable free radicals. The two haem groups have significantly different redox potentials. The high potential (+320 mV) haem feeds electrons from electron shuttle proteins to the low potential (-330 mV) haem, where peroxide is reduced (indeed, the low potential site is known as the peroxidatic site). The CCP protein itself is structured into two domains, each containing one c-type haem group, with a calcium-binding site at the domain interface. This family also includes MauG proteins, whose similarity to di-haem CCP was previously recognized.	1.08534e-60
NZ_CP053452.1\|WP_171470297.1\|1990759_1991311_-\|single-stranded-DNA-binding-protein	gnl\|CDD\|366099	pfam00436, SSB, Single-strand binding protein family. This family includes single stranded binding proteins and also the primosomal replication protein N (PriB). PriB forms a complex with PriA, PriC and ssDNA.	6.57913e-29
NZ_CP053452.1\|WP_171470284.1\|1976414_1977203_-\|DUF480-domain-containing-protein	gnl\|CDD\|377312	pfam04337, DUF480, Protein of unknown function, DUF480. This family consists of several proteins of uncharacterized function.	1.63841e-58
NZ_CP053452.1\|WP_171470287.1\|1980183_1981212_-\|glycosyltransferase	gnl\|CDD\|133016	cd02525, Succinoglycan_BP_ExoA, ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.	1.25558e-70
NZ_CP053452.1\|WP_171470293.1\|1986891_1987563_-\|hypothetical-protein	gnl\|CDD\|377368	pfam04468, PSP1, PSP1 C-terminal conserved region. This region is present in both eukaryotes and eubacteria. The yeast PSP1 protein is involved in suppressing mutations in the DNA polymerase alpha subunit in yeast.	1.4696e-08
NZ_CP053452.1\|WP_171470290.1\|1983137_1985399_-\|hypothetical-protein	gnl\|CDD\|349772	cd05387, BY-kinase, bacterial tyrosine-kinase. Bacterial tyrosine (BY)-kinases catalyze the autophosphorylation on a C-terminal tyrosine cluster and also phosphorylate endogenous protein substrates by using ATP as phosphoryl donor. Besides their capacity to function as tyrosine kinase, most of these proteins are also involved in the production and transport of exopolysaccharides. BY-kinases are involved in a number of physiological processes ranging from stress resistance to pathogenicity.	1.02908e-39

>NZ_CP053452.1|WP_171470289.1|1982360_1983011_-|hypothetical-protein
MIKPLTFFSVLALLVCGALVHGAVTQRWGIFVPDTELNDRLHALEVRLGDWLPTEVPTEMPLNERSTATSRRYQSPSGRTVVVSFISGIPGSVATHTPDVCYPGSGYKTLREPRKEPFALPDGRECVAYVADFEKKSQTKLDRVRVRWAWTTDGVWIAPDRPRWLFAGQLRSPMLYKVYIATTLPDAPGEAATEDDAATKAFVAAAWAQYSAAFGR
>NZ_CP053452.1|WP_171470288.1|1981427_1982162_-|sugar-transferase
MARPVNRLSPVRVSPRSALRTPANPAPRLRPNPAAPPVPPAGERARAAVDFVLAALGLVPAVPLIVLCAAAVRLTSRGPAVYAQERVGRGGAVFTLYKIRTMYHDCERLTGPQWSAPGDARVTPVGRVLRKLHLDELPQLFNVLRGEMALVGPRPERPEIVARLREVVVGYDRRHAVRPGITGFAQIHLPPDTCVRSVRNKLVYDLFYLRTRSWQMDLCILAATGLKALGLKKLYHRAPRVPTE
>NZ_CP053452.1|WP_171470287.1|1980183_1981212_-|glycosyltransferase
MPSVSVIVPVRNESRSVEHTLRLLLTQDFPPGAFEVIVADGASTDDTVPVVRRLQSEFANLKLVFNYGRLASSGRNTAIRHATKDVIVVVDGHCHVPDRGYLKKLSAAFEASGADSLGRPQPLGVERPTPFQRAVSAARSSRLGHNPDSDIYSNEAKFVPPQSTAVAYTRHVVHTIGLFDQEFDACEDVEFNERVHAAGLTCYFTPTVQIVYEPRGSFRALFYQLGRYGGGRAKLACKHPKSLSVPALVPPLWAVWVLAAGALCGAVPYLGALWLASLALYAAVLLGAGAVLGRGQPVAVAARIPVVFVAIHFGFAWGFWKESVKQVRRRLWPPPGGHKLPA
>NZ_CP053452.1|WP_171470286.1|1979608_1980187_-|redoxin-domain-containing-protein
MRPGDTVPDFAFLRPDGSRGQLSEFCTADFLLLVFLRHLACAACNAHLGEVDAARERFAARGCPVLVVSQAKPKILTLYTSRKVWGVPLVGDPDRAVYTVFGLERAGRLAFFKPLVLWRFFRAMTKGYLAARPYAGEDQRQLGGDFIITRERKLVFAYRSIDPTDRPSVAALLATLPASPTAGERTPATANG
>NZ_CP053452.1|WP_171470285.1|1977632_1979117_-|cytochrome-C-peroxidase
MTPHRLLSALVLLASAAPVVAQPEPKLEAADFLLPDESKMTPFKDRVPMVFVTSNQPEWKALKGFWTDGTQEDADPVTGLKVTRKVVKLKVPLGLTQAPVVPPENPMTVEKWVLGKKLYYDEILSSDGTVACASCHAPAKGFADGKRTSTGINNALGPINAPTVFNAAYNRFQFWDGRGTSLEDQAQGPVGNSKEMFGGKADPWEEAVTRLRANPGYVKAFNAVFGHAPTRDAAAKAVAAYERTVLLGNGLHDRAEAAMRTRVIEEESGKFVLTAADYATALKAEFAANGPALKDLGLDAAKDAARADAFGKRLLAGRDLFFGKARCTNCHTGDTYTDHTFHNLGVGAKSGELPLDDFGRFLRLPTGHKDTAFVGAFKTPGVRGLLHTAPYMHSGDEKTLEEVVEFYDRGGNVNAWLDEKMRDTAAEAAYVKARAAGKPVDPAVKTYGPAKKPIIPLKLNLTPQEKADLVLFMKALNGDPLDPLVADPARFPGK
>NZ_CP053452.1|WP_171470284.1|1976414_1977203_-|DUF480-domain-containing-protein
MSADATPSPQPQPAPNAPAPAPTPAPGPTWDPLSPIERRILGVLVEKQKTSKTADSYPLSLNALVTGCNQKSNRDPVLELDEVEVEEAVEALQPRGLVTRITGGRVDRFRHELYAVWTGGGPELAVLAELLLRGPQTKGDLRTRAARMAPIDSLDALEDVLGPLVERRLVVYLTDPDRRGAVVTHGFHTADELVRLTAQHSHAPTPVAELAPVPGRAAAPAGGLEAKLTAAVAEIDALKARVAALETQLADALKRPVPPAGG
>NZ_CP053452.1|WP_171475988.1|1975514_1975784_-|hypothetical-protein
MPVELHSERLLREVYGRPYAFVPFLADWRTDNVTRIARRVYTAREFSAMPILADALQDAGCDDDDLLAHCRNGRRHVRGCWVLDQILNH
>NZ_CP053452.1|WP_171470283.1|1973816_1975448_+|hypothetical-protein
MPTPTPLANYTSYKGLPPLAGLCTIEEAARPGLSVEECVRRLKRLHYGFKRLHQLLTARITAEPIYELKTGFAHHAYLCAEHATALRTRIGELREPPLGLEDVPHPALEAFFDEILAAPTTEELVEGAYGTAIDQLWHGIRKYRDDTNPLTDAPSRRVLRFALDEVNDMGNWGARVTSSLVEPDSERQTALEEWGKYLGSLLAAAGGLDGTATTTASGGREPHGHPSTQLNTVAASHGAAAPGSAQAISSQPVFSQPVSPQPVSPLGGLTPPTRRGEGVPRRYSATPYRYDPVPKRDERFTDPWNQGVNAEAFLYNPAYPARAKALMMLYKRLREIDVPEMMASIITQTPGKPWGYYRDMSRQLWDEARHAMMGEVGFVALGVDWTRAKITLNWSHRLNTECTPMERHGVLYFIEQGLMPRTGKRYEFETGQGSALPLVATLQDFDWADEVLHSQIGRQWYVPLFGSPKEALDFGDAAWSRVLSNWATVKDRGLTGHENWWPAVYEMACRAEGVPPDAAVLAFAETYEGKRADLKAVGEGLSG
>NZ_CP053452.1|WP_171470282.1|1972741_1973731_+|CoA-transferase-subunit-A
MAAPLFSSPASDDARAAFAAKPRGLTDKVMSVAEAVTRFVRDGDYLATGGFGTNRIPAAVCHEILRQRKQHLGFAGHTTTHDFQILAAGNLTGRGQTLAKVDAAYIVGLEARGLSPHARRVVESGTVRVAEWSNYTLALRYTAAAMGVPFVPARSLLGTDTLANCPAKVLTCPFTGEALVAVPALYPDVAAIHVHEADRYGNCRFSGTSVADVELSRAAKRVVITCERLVPHEEMRRDPHRTQIPFLCVDAVCEVPHGSYPGNMPGEYFSDEDHLRSWMEVEKDSAAFAQFLEDHIYGVRDFAEYLEQCGGLRRLQALRQRELLLHLGK
>NZ_CP053452.1|WP_171470281.1|1972114_1972543_+|hypothetical-protein
MPHPKRSAPTETFPPGSVLGVLAERSQLDFELEFLGKILGAVPDYADALRAQACNLTLKGRLKDGLAVDEKLVTVRPTDPTAHYNLACRYALLKQRDKALTALRRAVELGYRDFEFMLEDHDLDSIRKDPRFRKLVKEFKGQ
>NZ_CP053452.1|WP_171470290.1|1983137_1985399_-|hypothetical-protein
MTGPSFATPAPLAPAAHPGHKAAPKAPPPGRPALKPGAKPDEGGGLPVFTYLRLHWLMIVFCGSLLGAGGAALAWELLASKYESYGLFQVASAQTPIGNQSNAAGGRTDFGTYVKTTANLLKTDFVLNAALRDIKDLPTIKAQPDPIKYLEEEVVVAWQDGSEVIRVTFKGREPQDAKRIVDAIQNAFIKEVIDKEVKSKKAFLDLVEKWQKEIQRVLEAEKPAKAAGAAPAGAADAGTKPAAEKAPPGTPPEDILMRLDPGFFLKQFATLDHEVRTLPLTIAGYKRDETVMKDQLKALQDLEIPKATKGMMENDHEVVAQYQKMVRARTEYEFRLNAAENKTAPGILRLKAAYEEQSRKYEELKKDKIDAYDGWNRTKEAKVIAISLQKVIRDTQAAEERLEFSKKMLVEVANKVREIPIPADKAGGAVQHGFNEKEYTTSSSVLESTDGILRRLVTQYYQTKLELNSPQRVTVLQAGSHPTQKDTKKQLMGTIFAGVMGFALMAAGVVGFETVSRRVSSLAEVKAAVLAPVVGVVPGLPGAATGRDPVKRAAMNEAVDKLRAYVSQSWLSRGATTIAVTSAIGDEGKAFTAFGLASSLAQAGYKTLLVDFDLREPALHAFAGVPNQVGVCELLRAETDLRSAVLSLPSGLNLLPAGKWSDEARKAATGEKLENLLGRLKEPYDCVVLHGHALLTVAESVEVARRCEVVLVCARYRETVTPLLKRAAERVATMEIPFSGVVYVGSTEREALY
>NZ_CP053452.1|WP_171470291.1|1985524_1986151_-|exosortase/archaeosortase-family-protein
MLFHQLDAASLLLALAAIALAVGGLPLLKRAGPAIAFLIFMVPLPYELERNVGAPLKTAATVSSTYLLQTLGLPAIRDGNLILIDEIRLGVVDACSGLKMMVTFAAFSVGAVLLTQRSRFEKLLVLLGVVPVAVLTNVLRITATGVSFAATADKGAQDFLHNLHGWLMMPVGLALLALELWVLKRLVVDDREPMDPAALFAEPGAGYR
>NZ_CP053452.1|WP_171470292.1|1986036_1986456_-|exosortase/archaeosortase-family-protein
MSSISPAVPFSPPSALAPARTAVWQAAALAGVLGWAYLPMLRVFADKWLNDPQYSHGLLVPFFSAYLIWRAGQGGAVALRPAPVVGCGLLVAILGLRARPARCCSTNWTRRRCCWRSPRSPSRSAGCRSSSGPGRRSPS
>NZ_CP053452.1|WP_171470293.1|1986891_1987563_-|hypothetical-protein
MTPACLVQFGRSGFVGRFTGAVTVPRGERVIVRSPRGVEPGVVLCGPGGTVAPALSTEGEVLRVATAEDERHVAALSDRGAELLTLAGEAAAERGLPLAFVDAELTLDGHLILHGLAWGACDATALFADLSARFGLAVRLLDLSQTAVTRDPPATDGCGKPGCGTSGGGCSSCGTATDGENTGGCSTGSCARGKVKSAAEMTAYFTDLRRKMEAAAGTRTPLA
>NZ_CP053452.1|WP_171470294.1|1987758_1988391_-|Fe(2+)-trafficking-protein
MNNLADQIARFRNMAQEDPDNDLAHFRLGQFLLDDGQYEEAAKSFRRTLELTPEFSKVFQLLGECLIKLDQKAEAVEVLTKGWTTADDRGDRMPRDAMAKLLQQLGAPVPQKQIAITDEGSPGAGTGFRCERPGCMEGKRAVQLPAPPVPDAIGLRIHTDICAACWTLWWKDLSIKVINELRLDLSSEGGQFEYDRNMREFMGFEPEPPK
>NZ_CP053452.1|WP_171470295.1|1988546_1989353_-|hypothetical-protein
MLTTIALALLAGTPAQPADLKLSNVRMTIGELGPPREGNKLLPGDVLFVAYDIDGITIDGEGNAVYTMAMEVSDGAGKLIFKQDPRELTEFVPLRGNKMPARAFITIGLDQPPGVYNCKISVSDPKTKAVGTLNVKFEVLKKEFGVVAVFTTHDSKGELSAPNSGQVGQMLFVQFSIASFDRDKNKQPNVKVEFQVFDDKGLPTLTAPRKHVQTGAAPPVKDDEGAFALQFPLFLNRPGKFVVEIFATDEVSKKTSRYRLPVTVVAAN
>NZ_CP053452.1|WP_171470296.1|1990079_1990655_-|50S-ribosomal-protein-L9
MAKTAKKGDAASAKPAEKKLPQKKVRVRNQVKRGPHGGTLVVLVDDTPHVGKQGEVVEVKPGYARNYLIPYGKAVIPTVENLRTLEQYKIKVEKAREAKIADLKVLAEQLTRLPAVTIEANATEEGHLYGSIGPIEVSKTLKGKNLKVEPEMVKLENPIKEANTLTEVPLSLGYGIEAKIQVLVVALQGKK
>NZ_CP053452.1|WP_171470297.1|1990759_1991311_-|single-stranded-DNA-binding-protein
MATLNKVMLIGRLTKPPEPPRVLPNSGSTVVKFRFAVGRSRKNEAGGWDKDPNQLYIDCEVFSRPDSKRNLADLISKYAKQGDLMYVEGRLVFEEWDDKNGGGKRSKHKLVVDSVEFLGGRNAEGGGGEGEGGGGGRQYGGGQYGGGGSGGSRQTGGGRSAPPPDSDDDFGGNSGGGGDPIPF
>NZ_CP053452.1|WP_171470298.1|1991568_1992084_-|30S-ribosomal-protein-S6
MPIKMYETLFLLDPTKVSADADGVKQQLHTLIERSGGTIEISRPWDYNHKLTYPIAKSKKGSFHIVYYKFESTKQAELEREFALQEGLILRQLTSKLDPKWQDLILEVAREDHGNGFALRGMQDEAAVQTDPSAIGGEPIPPGLNDDIPPPRDGGGGGPRRGRREMAEKPD
>NZ_CP053452.1|WP_171470299.1|1992385_1993024_-|aminoacyl-tRNA-hydrolase
MKLIVGLGNPGPKYAGTRHNVGFDVIDYLAAAPGCTPFREKFEALVAEVKEGDETVLLVKPLTFMNLSGRAVRAIADFYKVPVEGLLVVCDDLNLPLGKLRIRIKGSHGGQNGLRNIQEQLGTDAYTRLRLGVGQPAFDAVDHVLSKFKAGERATVEEAIATAAQAALLWTRRGAEAAMNQFNGGDEKEKPKKEKKPRPDDKKADASDKPTL

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Crispr_ID: NZ_CP053452_12

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053452_12

2624952-2625118

Orphan

Consensus_repeat	Method
AGCCCGGCGTCCGTCAGCGCGGT	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP053452_12

>merge|NZ_CP053452|12|2624952-2625118|CRISPRCasFinder
AGCCCGGCGTCCGTCAGCGCGGTGCGGCCCAGGTGCAGCCAGTGCAGGTGCTCGAACCCGTTGAGGTGGGCGAGGCCGGCGTCCGTCAGCGCGGTCCCGCTGAGGTCGAGGACCTTCAGCGTCTTGAGGTCTTTGAGGCGGGCGAGGCCGGCGTCCGTCACCGGCGT

>NZ_CP053452|12|12|2624952-2625118|CRISPRCasFinder
AGCCCGGCGTCCGTCAGCGCGGT	GCGGCCCAGGTGCAGCCAGTGCAGGTGCTCGAACCCGTTGAGGTGGGCG
AGGCCGGCGTCCGTCAGCGCGGT	CCCGCTGAGGTCGAGGACCTTCAGCGTCTTGAGGTCTTTGAGGCGGGCG
AGGCCGGCGTCCGTCACCGGCGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053452.1\|WP_171470793.1\|2638886_2639183_-\|transposase	unknown	unknown	gnl\|CDD\|379129
NZ_CP053452.1\|WP_171470778.1\|2612070_2612604_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171470791.1\|2635923_2636883_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171470779.1\|2613082_2615986_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376626
NZ_CP053452.1\|WP_171470784.1\|2619844_2622505_-\|PAS-domain-S-box-protein	unknown	unknown	gnl\|CDD\|237425
NZ_CP053452.1\|WP_171470787.1\|2629987_2632690_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|340838
NZ_CP053452.1\|WP_171468857.1\|2639790_2639958_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237855
NZ_CP053452.1\|WP_171470794.1\|2640022_2643466_-\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP053452.1\|WP_171470780.1\|2616450_2617068_-\|RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|224511
NZ_CP053452.1\|WP_171470785.1\|2622745_2624248_-\|DUF1501-domain-containing-protein	unknown	unknown	gnl\|CDD\|369346
NZ_CP053452.1\|WP_171470792.1\|2637026_2638688_-\|outer-membrane-beta-barrel-protein	unknown	unknown	gnl\|CDD\|369446
NZ_CP053452.1\|WP_171470789.1\|2634369_2634780_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171470783.1\|2619290_2619680_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171470790.1\|2634999_2635515_+\|thiol-peroxidase	unknown	unknown	gnl\|CDD\|179055
NZ_CP053452.1\|WP_171470782.1\|2618583_2619267_+\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|372995
NZ_CP053452.1\|WP_171470788.1\|2632786_2633920_+\|NADH:flavin-oxidoreductase/NADH-oxidase	unknown	unknown	gnl\|CDD\|239242
NZ_CP053452.1\|WP_171476017.1\|2615909_2616359_-\|zf-HC2-domain-containing-protein	unknown	unknown	gnl\|CDD\|379219
NZ_CP053452.1\|WP_171470786.1\|2628201_2628966_+\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274357
NZ_CP053452.1\|WP_171470781.1\|2617357_2618587_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|379114
NZ_CP053452.1\|WP_171470777.1\|2611093_2611861_-\|TIGR03000-domain-containing-protein	unknown	unknown	gnl\|CDD\|274383

Protein	Function_ID	Function_description	E-value
NZ_CP053452.1\|WP_171470793.1\|2638886_2639183_-\|transposase	gnl\|CDD\|379129	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096).	4.88899e-28
NZ_CP053452.1\|WP_171470777.1\|2611093_2611861_-\|TIGR03000-domain-containing-protein	gnl\|CDD\|274383	TIGR03000, plancto_dom_1, Planctomycetes uncharacterized domain TIGR03000. Domains described by this model are found, so far, only in the Planctomycetes (Pirellula sp. strain 1 and Gemmata obscuriglobus), in up to six proteins per genome, and may be duplicated within a protein. The function is unknown.	2.52069e-13
NZ_CP053452.1\|WP_171470779.1\|2613082_2615986_-\|hypothetical-protein	gnl\|CDD\|376626	pfam01835, A2M_N, MG2 domain. This is the MG2 (macroglobulin) domain of alpha-2-macroglobulin.	8.927e-05
NZ_CP053452.1\|WP_171470784.1\|2619844_2622505_-\|PAS-domain-S-box-protein	gnl\|CDD\|237425	PRK13557, PRK13557, histidine kinase; Provisional.	2.83809e-95
NZ_CP053452.1\|WP_171470787.1\|2629987_2632690_+\|glycosyltransferase	gnl\|CDD\|340838	cd03809, GT4_MtfB-like, glycosyltransferases MtfB, WbpX, and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. MtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.	7.37912e-48
NZ_CP053452.1\|WP_171468857.1\|2639790_2639958_+\|hypothetical-protein	gnl\|CDD\|237855	PRK14900, valS, valyl-tRNA synthetase; Provisional.	3.94292e-05
NZ_CP053452.1\|WP_171470794.1\|2640022_2643466_-\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	3.41676e-99
NZ_CP053452.1\|WP_171470780.1\|2616450_2617068_-\|RNA-polymerase-sigma-factor	gnl\|CDD\|224511	COG1595, RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription].	2.09074e-34
NZ_CP053452.1\|WP_171470785.1\|2622745_2624248_-\|DUF1501-domain-containing-protein	gnl\|CDD\|369346	pfam07394, DUF1501, Protein of unknown function (DUF1501). This family contains a number of hypothetical bacterial proteins of unknown function approximately 400 residues long.	4.34753e-77
NZ_CP053452.1\|WP_171470792.1\|2637026_2638688_-\|outer-membrane-beta-barrel-protein	gnl\|CDD\|369446	pfam07642, BBP2, Putative beta-barrel porin-2, OmpL-like. bbp2. BBP2 is a family of putative porin proteins that are likely to be outer membrane beta barrel proteins porins.	1.18161e-12
NZ_CP053452.1\|WP_171470790.1\|2634999_2635515_+\|thiol-peroxidase	gnl\|CDD\|179055	PRK00522, tpx, thiol peroxidase.	1.90857e-74
NZ_CP053452.1\|WP_171470782.1\|2618583_2619267_+\|HNH-endonuclease	gnl\|CDD\|372995	pfam14279, HNH_5, HNH endonuclease. This domain is related to other HNH domain families such as pfam01844. Suggesting that these proteins have a nucleic acid cleaving function.	0.000398726
NZ_CP053452.1\|WP_171476017.1\|2615909_2616359_-\|zf-HC2-domain-containing-protein	gnl\|CDD\|379219	pfam13490, zf-HC2, Putative zinc-finger. This is a putative zinc-finger found in some anti-sigma factor proteins.	2.79181e-07
NZ_CP053452.1\|WP_171470786.1\|2628201_2628966_+\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	9.34996e-29
NZ_CP053452.1\|WP_171470781.1\|2617357_2618587_+\|AAA-family-ATPase	gnl\|CDD\|379114	pfam13304, AAA_21, AAA domain, putative AbiEii toxin, Type IV TA system. Several members are annotated as being of the abortive phage resistance system, in which case the family would be acting as the toxin for a type IV toxin-antitoxin resistance system.	5.68698e-15
NZ_CP053452.1\|WP_171470788.1\|2632786_2633920_+\|NADH:flavin-oxidoreductase/NADH-oxidase	gnl\|CDD\|239242	cd02932, OYE_YqiM_FMN, Old yellow enzyme (OYE) YqjM-like FMN binding domain. YqjM is involved in the oxidative stress response of Bacillus subtilis. Like the other OYE members, each monomer of YqjM contains FMN as a non-covalently bound cofactor and uses NADPH as a reducing agent. The YqjM enzyme exists as a homotetramer that is assembled as a dimer of catalytically dependent dimers, while other OYE members exist only as monomers or dimers. Moreover, the protein displays a shared active site architecture where an arginine finger at the COOH terminus of one monomer extends into the active site of the adjacent monomer and is directly involved in substrate recognition. Another remarkable difference in the binding of the ligand in YqjM is represented by the contribution of the NH2-terminal tyrosine instead of a COOH-terminal tyrosine in OYE and its homologs.	0

>NZ_CP053452.1|WP_171470785.1|2622745_2624248_-|DUF1501-domain-containing-protein
MLRVLGHPKRLCNGITRRDLLTAGSALGLTLPAFLRAGAGRTGPETAQGRDKHFGRAKACILLYLYGSPSQIELADQKPNAPVEVRGELKSIKSTLPGCDVCELLPHTSRVMHNVTVVRSVTHPYPIHGVAYATTSVPEIDVAMELAPHDARHWPFIGSAVAHLEHRKNPASARKPVPDNIALPFPFSSQRTGEVQRAGPYPAFLGNQFSPHFTRFHGAATAKIAKTLADRTVEFDEPYAGVSPDSYFALGGEPAADITLDRLNTRKSLLGQMEDARRGRDAAYGSRGPRDPFRELAYSLVGSNVARNALDVRREPAKTRASYGHMLFGQSCLAARRLVEAGSRFVTVFWDEFGLAGSGWDTHWEHYPRMRNELMPGLDRGFSGLIADLDQRGMLDETLVLVLSEHGRTPKLNSAKGAGRDHWSQAYSVLLAGGGIARGKTVGKTDSIGGTVVDRPVSPKDVLATAYHLLGYDLETTLTDKTSRPVPIVPGGQVLRDVLA
>NZ_CP053452.1|WP_171470784.1|2619844_2622505_-|PAS-domain-S-box-protein
MTGLDPAELAQALFSEIGDALFLLDPETDQLIEVNPVALRLTGYARAELLGFSAAHLFRFEAPGGAQRLRGAFTKTMVFHGQDGFLLRTKGDAWVPVGLTVSRLHVAPKTLGLIIARDDRERRAALAQTRRMEAELRAVLGSSPAALWSAERAPGPDVFAGWQFRYVAPLLARTAGRPVEYFDGPFKWIEVVHAADREAYRTALRRLLTGGTEVEQLYRVQPADGGVRWVRDRLQVVRDASGRPVRLDGCVTDVTEQRRAEDALRQSEERFRALVEKSRDGILLVDERSDIRYATPALRSVLGYDPAAAVGRNWLALVHPDDRAAARERLADSLNRPGEDVPFTFRGAAADGALRVIEMNGVNRLDDPSVRAVVINYRDVTERDEAVRGRAREHALLEGLFASVPDIVVYKDRAGRLLGANPAFEALAGRPPAELVGTSCEELFTGEWAERVRAAEEGVLATGQTARCKEWVPYANGRKVLLDIALAPLRDDAGAPVGLIVVGRDVTEQDRLEDELRQSHKMEAVGRLAGGIAHDFNNLLTVVLGNLELVRSGAASGSEADDLLAGTERAARQAAELTKQMLGFARRQPLRTVTVDLNALVRDALSLLRRGIDPRVAVRFRPAADLCPVAADPVQVQQILMNLCLNARDAMPDGGTLTLETANDDGPPDAAPVRRVRLSVTDTGIGMTDEVRAKVFDPFFTTKGVGQGTGLGLAVVYGVAKAHGGWVDVTSAPGAGSRFDVYLPCAAATDERASAPGAPPDARKGSGQTVLVADDEAGVRDLARTALEMAGYRVLVAADGAEAVAVFRTAPARVALAVLDASMPRLSGRQVFAAIRKLDPAVKVLFASGYHDSGSGADAPGTHVLNKPYTPSELAAAVHDMLAAPR
>NZ_CP053452.1|WP_171470783.1|2619290_2619680_-|hypothetical-protein
MKNPQGSRTVSILWRVSVCAWIGVGLYWFYLSYISRFSAEDVHDEGRRVVTALEEYKSARGQYPRRLEDTSVAEQKFPKGVAFAYSVNESFQSYVLVVSGGGHTWRYFSAMKNWQHVPPGAERATAPAE
>NZ_CP053452.1|WP_171470782.1|2618583_2619267_+|HNH-endonuclease
MIRLHKGPPPDILVNKAAEWTKEYKDALAAKTMTDTIRYRYRHADIKLALRRDSHNKCIYCESDIGFGQIDHIHPVTKCPDEIVLWENLALVCPECNTHKSDYHAPTEPLINPFVHEPSAHLLFLGSMVVAVLGDAMGLRTLKQMNLNRWDLIQKRTKRLERLVPLIEQWRAHPDGATKTILRNAIRDEASDAMDYAATVRAYLKGVLGWDHPPDASAPDTAVATSG
>NZ_CP053452.1|WP_171470781.1|2617357_2618587_+|AAA-family-ATPase
MFSKLVIHHWRQFNHVEIDFHRRLTVLTGVNGSGKTTLLHLLNRHWGWTNQYVSSPPSNGTESRKYWAGFWGEEETSSGTNVARYHTIGKLDYLNGESVWLTVSSDVAEVFEVGPPPRKVPGVYVPSYRLPYRFEPITTVPVKLDAKQQIFDGYADEVRIRYFGGGQNRLPSFHLKRALMSLALFGYGGAAVEPDAEAVKIFEGFENILRVTLPESLRFKKLKVRVPEVLLVTDTGEFPLEAVSGGIAAVIDIAWQIHMYAQLHDEFVVVIDEPEAHLHPALQQRLLPDLLTAFPKAQFVIATHSPFMVTSVPDSNVYVLNYNAERKVDSTLLDRANKAGSADEILMDVLGVPSTIPQWARTKIDSLLEDFSKGPFTQASVNQLKTKMSDLGMAHLFPEVLATAAEGKP
>NZ_CP053452.1|WP_171470780.1|2616450_2617068_-|RNA-polymerase-sigma-factor
MAKHGAPPIVRPPAGTDPAPAPPPVGPPPAGGRPGDDALVAMFNQVRDELVSTLLYLLGNADDAQDAAQEAFLKCWRARASVPDVQNLRAWIFRVGLNAAKDFQRSAWNRKSRPLPEEDLMIPTRDETPGQGVEDQEALDRLRQAITQLRQDEKEVFLLRQNGDLTYEQIAEIRNAPVGTVKTQMRAALIKLRKVLNPVGEKDEG
>NZ_CP053452.1|WP_171476017.1|2615909_2616359_-|zf-HC2-domain-containing-protein
MNCEHCHSLLLDQLYGLLDGPEAAAVEEHLATCPACARRVETARVQGLIARAAKGAFPGTRFEPPVPTKVGSRTPPPLPYPPRFPPPRRCHRERGRPARPHASGARGPRVGGRRRSSDCRSGHRRVGPRNLRPGRRREPRRPGRVARGR
>NZ_CP053452.1|WP_171470779.1|2613082_2615986_-|hypothetical-protein
MSVLEIFDRAAAANRDARAAWRAADDAVGAVETVRLRRAQSLSDAGLKLAAAEQAQASLLSKWVSAQKEAVQADANRKLVVEVQKPATVQPGAPNDFLVVVRDSRPLWETAGKRMVAEVHAVDASDAVIFSQPLDPERKGDTHPLRLPAAAWAQVKPNAELYLVVAQVDEKTLARTELQERVRLAGPAFATLLVTDKAAYRPGERLFFRSLTLDRATFRPPGREQVLRYELRRPGDHRTVSGLSVTGTTGLVRVSGAGRVDLVRTADGQPVRGVGCGEFVLPEDLADGDYTLVLHEQELPGGRPPTVPLPVTRTVTVRTGAADTCRKQIGFRAAAFAPGQTVDAWAELKFQDKALPGAAVTAVTAQADGEPLDGIEAPKETDADGRARIRFRLPAEVPDGDVRLRVTFRTPLGGEETVAQRVPVVGNRLKVEFFPECGDTVVAGVPCKVYVRATTPAGQPVDIRGTVTDGREELAKVESLRDDRHPGANRGLAAFTYTPKLGGRAWLKLDAPAGAYAPILTSGPVPSSAVALFGGPGAVAARTGFLLPEQASDGVVMSVLDPVTAPGTPIRVRLYSVGRVRTLVVGAYTRGHLSDTQKVVVEPELPQIVRLMAGPDPRGGVVRVTAFEELAEVPGEPKPDLKPVAERLVFRKPGEELKLQYAIRTAAPAAPLPAGTFRAGSEVQLSVTATDEKGAPAAAVLWAAAVNSGVAPGAKDRLMPTHFLLAGEVKSPDDLEYADFLLTDDPRAGEALDLLLGTQGWRRFVEQPAHPHVRAPFPSPDVARLLVQNGQYATWTEPAPVRDQRKLFETYAPLYETAVRAVAQAKLDLDAVGATARDTTEIERTAAAAASARPRAREAEGGDRRRRPCAGAAVPLGGVVRRRGTGRVCSLLRRAVAGATDRPVPARLQYARVRWPRRLPRGRCRLGRRRHGERRGPRPSGSPIGKRGLADAPGRPGPSDGRRAPCV
>NZ_CP053452.1|WP_171470778.1|2612070_2612604_-|hypothetical-protein
MSLRKLDPSIPAVERDEDLKRDGDRAAKYATDRAATLAPAVDAYLAVAGRQPASLAVQRYAAQQARVVAAPVPPLVVREYAAARPEPAPVPDAGAPDTVLWQPVIVLPAAGTTALNFHLGDLPGGYQLMIAGHTADGRLGATRGIVTVVPGPTPAPIGPGAPAGAIPPAAPVAPGPR
>NZ_CP053452.1|WP_171470777.1|2611093_2611861_-|TIGR03000-domain-containing-protein
MRSRAFWSVVIVCVCLPLAGRADDTGPLGIFHHYGYPRGPRVAPYWSYPGLTKGPTITYPTPPKYTGFFGYGLVPVDCSDKTWPNGVSFCRPPVPVYGPLPATFGDDPLVKQWRSTLAPGLVNYGWIGLYSAMPRPKHLSVHAWPTVNGTGTGPASGNPGTGATAGGCLTLSVKLPQAGAEVLVDGRATTQTGTDRTYESPPLETGRVYGYTVTARWVEGGQVVEVTKAVTGGPGEVVRVDFGAPAGAPAVAAGK
>NZ_CP053452.1|WP_171470786.1|2628201_2628966_+|sigma-70-family-RNA-polymerase-sigma-factor
MDDTPFTAVDRDLLKRCLHREPGSWNDFVDRFLSLIYHTIGYTAHLRSVRVGPEDVEDIAAEVLLQIVASDFKVLREFRKESSLATYLTVIARRICVHELVRRQKVRDAIKRGDSRLAEPEPDDAPAAQKGMESLEEVEKLLRRLSGREREIVRLYYLEGRTYEEISTETDVPVNTIGAILSRARKKLRDMAAPSASGVTAVLDSTPAPAAAKPKVAKATAKPAPPTASIRPTKPSRVKPKADPLSEQKAEADE
>NZ_CP053452.1|WP_171470787.1|2629987_2632690_+|glycosyltransferase
MNVGIDLRPLSAGESGGLVTLVRGLAAELFSLGCADTFTVFTSPRSGLPFPVPSNVNVCELDDGPPAFDTALARSEIDVLLRAYPTDEPLAFPPAHEVTIVPDLLHADRPDQLPPETVARRAVAFARAATCGAVAVPSLSTLAQFQKHFPTARATPFLVPPVPPRLRERLAAPLTTEDTARVPGGPFFLYPAHGWPHKNHAGLLRAWERFRTRHPHHVLVLTGTGKCVPGLLAAAPDPSVRDLGYVSDRLLAELYDRATALVFPSLYEGFGLPLLEAFDVGRPVLCGNTSALSEVGGDAVLAVDATNADALAAALERLATDPDLRAALATRGRARHDVYAAGSGPRALLGALTDVAARAVPPEQVRAGQRIAAERLAAAEADRAARLNQLVALHDEAARQRAYIERREAERATEYDRLFDAPPGPLVSVVVTMGDTRGAPERCVRAWTQEQTFPRDRIEVIVGFDGKKPDELEQVKRVLGPTDRVVHVPTDSESGPWAAGARHARGRWLYFAEAHSYGEPECLEEMIRYLVATRRPGASSRSLGLGESLSARLEERLYDRVKPVRVADDHWSKLFLRGAALEREVYHRVGGLQGEYGRFSEPLLAARLHRAGYRLGYAPRSIVRHWNTTSFAQLEEHVHDYATCECAFRLTDPDPVWDSYFGTPTEWARGGRTDPALARVEARVRLGGLLRGAGSVRELAKLLPACVLGGRWWRWPAASGRVLRKLRVHLMEHGEARTDAFAALWQRYAAGARLDVLTRIASHTVTPRESVAIDEFPAPLLVGFHPLERYGGLPFRWAEPLAHVKLALPPGEQIVELVTRELRPPLGLEAFVNGRRAPVENRTAEDGRVRVTVHESARRTGLQYLTLKCVPWSAAGDTRALGLPLFGLRRAVAARQLRAA
>NZ_CP053452.1|WP_171470788.1|2632786_2633920_+|NADH:flavin-oxidoreductase/NADH-oxidase
MSDSPHAGCRSAVSDDRNLPDTDLLTPFTIRGVRLRNRIVVSPMCQYCASNGMADDWHLVHLGSRAAGGAGLVFVEATAVAPEGRITPGDLGIWSDAHAEPLARIAAFVTRMGAVPAIQLAHAGRKASCGLPWEGGGQLALDNGGWETLAPSAVPFAETDRPPTALSEAGIRAVIGQFQAAATRAVRAGFRVIELHAAHGYLMHEFLSPLSNRRTDRYGGSLENRTRIVLETATVLRGVVPAELPLFVRISATDWVEGGWDLPQSVALAKALKPLGVDLIDCSSGALVPGAKIPVGKGYQVPFADAIRKEADILTGAVGLITDPHQANEVVTSGAADLVFLAREMLREPYWALKAQQALNQEPAWPTQYGYAVKRRP
>NZ_CP053452.1|WP_171470789.1|2634369_2634780_+|hypothetical-protein
MASHRLARTMVRPNYGIVYLRSNLFGPDRYAKGIMASSTKLPFEKDLPTRDRIFKWFGELRRDRRHLRGGFRSVYPVQLRSEAHRQMRLDTGVSVAELGLGTWTRVGDGLWLWELTDAEVTKAKALFERSGLLLAA
>NZ_CP053452.1|WP_171470790.1|2634999_2635515_+|thiol-peroxidase
MARTVTFKNNPVTLAGPELKPGDTAPSYTGLSGLSPVTLADTPAKARLFSVVPSLDTGVCSLQTKKFDDGIKALGDAVACYTVSLDLPFAQKRFCTAEGIATMQTVSDVHDHSFGQNWGVLIESGLPLKLLARSVFVVDKAGKITYAEYVPEVTNHPNYDAALDALKAAAK
>NZ_CP053452.1|WP_171470791.1|2635923_2636883_+|hypothetical-protein
MTFYRCAGLALAVALTGAAGTSGRATAAWDNVFQVCCNDCNKPRASYYAPQACPQPCPQPEMRISYVQRSYYQPVTEYVRKSYYEPVTKNVTSYYYEPVTEYKYSTYYDPCTGCPQRVSTPVTSYRLRSQCNSVTSYVERTAMVPVTSLRQVNYQQPVVSYYYPPQPTGTSFYPLPPASPPAGPSVNELRENPPSVMPQTNGSDTIPPTTVPTTPGSNPRNTKLRPEKTVARSSVVSVRGEVVLNDQITPRAGAKLVFVNAEKMDQKEYATANPYGEFDVRLPAGRWYMYVGGEGGKATYHKQIAVGDRDTVDYKVVSR
>NZ_CP053452.1|WP_171470792.1|2637026_2638688_-|outer-membrane-beta-barrel-protein
MLTAVLLTAGLVGQPPAAAGPAPGAPLAPVRVDPPVPPIGGVQIPNAGLGYPVSRNGPPVAAPEGDATGTAGGNGTDAKGAAAQDNPRRYPPFLKPRSDEGGDFYQRLYREYYKQFFPDPNAKTEEPSPPPRRALPSPWSAPPFPGDEYQGYPLLGVPSVYGTSPIMQALYAGPNGQAIKDGRIFFEGWATSSGNVSTAKNSNVPTSYWVVPNRMELDQLVFKLERLPDTVQTDHWDWGFRSVAMYGIDYRYTTAGGWGSDQLLKHNLLNGWDPVEQYFNVYIPGILGGTDVRVGRWIACPDIESQYSINNYLGSHSILFTYDTYTDTGIMITQKLDDQWTVQAALHSGTDMAPWYPGAVATFAAGVRWVSLSNADAFYTWVNALNSSQFRHFQQYGQPLGHDNFNYIVSTWEHRFNEWCHTKTEAYFMWQKNAEVGGTPSAGPVQPFGGGGGDGTLLPGTSLAYGVLNYTMFKLCDRDYVTVRNEVYRDERGMRTGVAGTYTSHTVGLSHQFNDVMMLRPEIGFYRNWDNPAFDGGTRKNLLLAGFDFTVRF
>NZ_CP053452.1|WP_171470793.1|2638886_2639183_-|transposase
MTAPSGHTPHPEPEPKDLTDAEWTLVSPLLPVPKPGGRPRTIDLRAVVNAILHIQRAACPWRGLPRRYPNHSSVRTYYDRWVRDGTWDRVRAALGAPQ
>NZ_CP053452.1|WP_171468857.1|2639790_2639958_+|hypothetical-protein
MSIVRIGMSEDGKFGSGYDAIFGTKSGTEKKPAAKAPAKKPAAAKAPAKKAAKKK
>NZ_CP053452.1|WP_171470794.1|2640022_2643466_-|serine/threonine-protein-kinase
MAAVLKARDLELGRIVALKILPPEAARDPESVNRFKQEGRAAAKLDHDNVARVYFCGEDQGLHFIAFEFVEGDNLRVLIDRRGPLTAAECVPYMMQVAAGLNHAAERGVVHRDIKPSNILITPDGRAKIVDMGLARYLDSDAVNGGVTQSGVTLGTFDYISPEQALDPRRADVRSDIYSLGCTFYHALTGRPPVPEGTAARKLRAHQNEPPLDPRELNPAVPDELAAVLAHMMAKAPADRYQTPTELIAHLKGLAERLRLGADPLANDSATKAVPAETRLLPQEPRVRPWWVLAVAAVALAAVAFVVATSNPGPAPGVFGGADLAKEKAPDVPLPSEKGVGPPVGLKPPTGPVTTVPALVDRLEDPNATGRVRVELGPGKFDLTKLPRSVSFKGRSLELVGAPGGGTRVVLAADQNRDAPGSLVLKATDETKSLTLRNIWFDLTLTRNVTEEVPPRTELFGLQLDAAQVSLDDCVFSTSDRNLDSYSPRSVAVTRSTAGPLRLDVLRCLFAPGSGVGVTVPTGAKVYVTDSGFAPHEAGIHIESPLIAGADPRAQTTDVQLEHSSFMLDPGECAVETDAPAATSVTTADCLFAPVGGPPVLPTFPTTSAAISRGVVVRVRGARPDGVEVKPRSGRTNAFYNVDLLGTRDDTIEAGDKGFVALKQRPWAIGDTLAAARDPESPWKAFRLKVAGPEVDGALLTVDKKPEPLGAAFYQPDNKRRLTYEGMDGFTWGGIARPKPAAEVRQKVWYPKPPPGTEALPGVYANLGALLDQLRPGEDVLIRHDGELPCDTIKLRSQAKPNEGEFRVTFRPYPGCQPVLTVHKDSELDQTLFKLLGGEVTFENVHFRLAPDQPKERQTVTAVALLGGKGCAFNSCVFTLAEEDEAKVAAVHLPDVEKAMVMKADTRVVPKVTFTNCLVRGRGRGVWVGASRPVTLEMTNTLTALDGPVFFAEAGGEAVAGTSTAKFTRVTVLAGGPVVEMHGKSAEARSSGLVKLDVETSRCLFVAVKDAGLPLVELDGVEPTDWKTVLGWQIKEGEGNRYVNFDPSADLAVIRPGGDGLEKRWTRTDWVANIGEPTNADKRFGTITFAAPVPLLKGLAAVRPADVVAREFLFQDLEDAKTLDAGVDQQEWKKKPLPLANLTKPKP

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Crispr_ID: NZ_CP053452_13

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053452_13

2764786-2764874

Orphan

Consensus_repeat	Method
GTGGGCGACGCCGGCGCGGCGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP053452_13

>merge|NZ_CP053452|13|2764786-2764874|CRISPRCasFinder
GTGGGCGACGCCGGCGCGGCGGCGCTCGCCGCGGCGCGGTCGCTCTCCGGGCTGCTCGAACTCGACCTGCGCGACGCCGACGTGGGCGA

>NZ_CP053452|13|13|2764786-2764874|CRISPRCasFinder
GTGGGCGACGCCGGCGCGGCGGC	GCTCGCCGCGGCGCGGTCGCTCTCCGGGCTGCTCGAACTCGAC
CTGCGCGACGCCGACGTGGGCGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053452.1\|WP_171470889.1\|2762248_2763364_-\|HlyC/CorC-family-transporter	unknown	unknown	gnl\|CDD\|224173
NZ_CP053452.1\|WP_171470882.1\|2753681_2754416_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|366102
NZ_CP053452.1\|WP_171470893.1\|2767839_2769105_+\|TIGR02996-domain-containing-protein	unknown	unknown	gnl\|CDD\|274381
NZ_CP053452.1\|WP_171470900.1\|2777657_2779118_-\|TIGR01777-family-protein	unknown	unknown	gnl\|CDD\|187553
NZ_CP053452.1\|WP_171470896.1\|2774137_2774641_-\|DUF4365-domain-containing-protein	unknown	unknown	gnl\|CDD\|379535
NZ_CP053452.1\|WP_171470894.1\|2771055_2773737_-\|WD40-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|238121
NZ_CP053452.1\|WP_171476026.1\|2754501_2756034_+\|aldehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|143434
NZ_CP053452.1\|WP_171470885.1\|2758313_2759315_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP053452.1\|WP_171470891.1\|2765079_2766243_+\|TIGR02996-domain-containing-protein	unknown	unknown	gnl\|CDD\|274381
NZ_CP053452.1\|WP_171470892.1\|2766360_2767626_+\|TIGR02996-domain-containing-protein	unknown	unknown	gnl\|CDD\|274381
NZ_CP053452.1\|WP_171470884.1\|2757234_2758203_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171470881.1\|2751473_2753366_-\|aspartate-kinase	unknown	unknown	gnl\|CDD\|236018
NZ_CP053452.1\|WP_171470895.1\|2773832_2774141_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171470886.1\|2759450_2760236_+\|ABC-transporter-permease	unknown	unknown	unknown
NZ_CP053452.1\|WP_171470899.1\|2777237_2777594_-\|STAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|132914
NZ_CP053452.1\|WP_171470887.1\|2760250_2760547_-\|zinc-ribbon-domain-containing-protein	unknown	unknown	gnl\|CDD\|379084
NZ_CP053452.1\|WP_171470897.1\|2775080_2775950_-\|fumarylacetoacetate-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|223257
NZ_CP053452.1\|WP_171470888.1\|2760783_2762088_-\|DUF1015-domain-containing-protein	unknown	unknown	gnl\|CDD\|377633
NZ_CP053452.1\|WP_171470898.1\|2776087_2777266_+\|cysteine-desulfurase	unknown	unknown	gnl\|CDD\|224029
NZ_CP053452.1\|WP_171470883.1\|2756076_2757105_+\|alcohol-dehydrogenase-AdhP	unknown	unknown	gnl\|CDD\|176257

Protein	Function_ID	Function_description	E-value
NZ_CP053452.1\|WP_171470889.1\|2762248_2763364_-\|HlyC/CorC-family-transporter	gnl\|CDD\|224173	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only].	1.17813e-101
NZ_CP053452.1\|WP_171470882.1\|2753681_2754416_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|366102	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.	2.07199e-09
NZ_CP053452.1\|WP_171470893.1\|2767839_2769105_+\|TIGR02996-domain-containing-protein	gnl\|CDD\|274381	TIGR02996, rpt_mate_G_obs, repeat-companion domain TIGR02996. This model describes an abundant paralogous domain of Gemmata obscuriglobus UQM 2246, a member of the Planctomycetes. The domain also occurs, although rarely, in Myxococcus xanthus DK 1622 and related species. Most member proteins have extensive repeats similar to the leucine-rich repeat, or another repeat class or region of low-complexity sequence. This domain is not repeated, and in Gemmata is usually found at the protein N-terminus.	5.79448e-17
NZ_CP053452.1\|WP_171470900.1\|2777657_2779118_-\|TIGR01777-family-protein	gnl\|CDD\|187553	cd05242, SDR_a8, atypical (a) SDRs, subgroup 8. This subgroup contains atypical SDRs of unknown function. Proteins in this subgroup have a glycine-rich NAD(P)-binding motif consensus that resembles that of the extended SDRs, (GXXGXXG or GGXGXXG), but lacks the characteristic active site residues of the SDRs. A Cys often replaces the usual Lys of the YXXXK active site motif, while the upstream Ser is generally present and Arg replaces the usual Asn. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	9.9274e-117
NZ_CP053452.1\|WP_171470896.1\|2774137_2774641_-\|DUF4365-domain-containing-protein	gnl\|CDD\|379535	pfam14280, DUF4365, Domain of unknown function (DUF4365). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria, eukaryotes and viruses. Proteins in this family are typically between 182 and 530 amino acids in length. There is a single completely conserved residue D that may be functionally important.	1.77798e-23
NZ_CP053452.1\|WP_171470894.1\|2771055_2773737_-\|WD40-repeat-domain-containing-protein	gnl\|CDD\|238121	cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment.	6.08236e-60
NZ_CP053452.1\|WP_171476026.1\|2754501_2756034_+\|aldehyde-dehydrogenase	gnl\|CDD\|143434	cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like. Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression.	0
NZ_CP053452.1\|WP_171470885.1\|2758313_2759315_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	5.64287e-80
NZ_CP053452.1\|WP_171470891.1\|2765079_2766243_+\|TIGR02996-domain-containing-protein	gnl\|CDD\|274381	TIGR02996, rpt_mate_G_obs, repeat-companion domain TIGR02996. This model describes an abundant paralogous domain of Gemmata obscuriglobus UQM 2246, a member of the Planctomycetes. The domain also occurs, although rarely, in Myxococcus xanthus DK 1622 and related species. Most member proteins have extensive repeats similar to the leucine-rich repeat, or another repeat class or region of low-complexity sequence. This domain is not repeated, and in Gemmata is usually found at the protein N-terminus.	3.53236e-15
NZ_CP053452.1\|WP_171470892.1\|2766360_2767626_+\|TIGR02996-domain-containing-protein	gnl\|CDD\|274381	TIGR02996, rpt_mate_G_obs, repeat-companion domain TIGR02996. This model describes an abundant paralogous domain of Gemmata obscuriglobus UQM 2246, a member of the Planctomycetes. The domain also occurs, although rarely, in Myxococcus xanthus DK 1622 and related species. Most member proteins have extensive repeats similar to the leucine-rich repeat, or another repeat class or region of low-complexity sequence. This domain is not repeated, and in Gemmata is usually found at the protein N-terminus.	3.16386e-13
NZ_CP053452.1\|WP_171470881.1\|2751473_2753366_-\|aspartate-kinase	gnl\|CDD\|236018	PRK07431, PRK07431, aspartate kinase; Provisional.	0
NZ_CP053452.1\|WP_171470888.1\|2760783_2762088_-\|DUF1015-domain-containing-protein	gnl\|CDD\|377633	pfam06245, DUF1015, Protein of unknown function (DUF1015). Family of proteins with unknown function found in archaea and bacteria.	1.1688e-140
NZ_CP053452.1\|WP_171470899.1\|2777237_2777594_-\|STAS-domain-containing-protein	gnl\|CDD\|132914	cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation. Anti-anti-sigma factors play an important role in the regulation of several sigma factors and their corresponding anti-sigma factors. Upon dephosphorylation they bind the anti-sigma factor and induce the release of the sigma factor from the anti-sigma factor. In a feedback mechanism the anti-anti-sigma factor can be inactivated via phosphorylation by the anti-sigma factor. Well studied examples from Bacillus subtilis are SpoIIAA (regulating sigmaF and sigmaC which play an important role in sporulation) and RsbV (regulating sigmaB involved in the general stress response). The STAS domain is also found in the C- terminal region of sulphate transporters and stressosomes.	2.12867e-11
NZ_CP053452.1\|WP_171470897.1\|2775080_2775950_-\|fumarylacetoacetate-hydrolase-family-protein	gnl\|CDD\|223257	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism].	1.5723e-100
NZ_CP053452.1\|WP_171470887.1\|2760250_2760547_-\|zinc-ribbon-domain-containing-protein	gnl\|CDD\|379084	pfam13240, zinc_ribbon_2, zinc-ribbon domain. This family consists of a single zinc ribbon domain, ie half of a pair as in family DZR. pfam12773.	3.46101e-05
NZ_CP053452.1\|WP_171470898.1\|2776087_2777266_+\|cysteine-desulfurase	gnl\|CDD\|224029	COG1104, NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism].	5.64661e-167
NZ_CP053452.1\|WP_171470883.1\|2756076_2757105_+\|alcohol-dehydrogenase-AdhP	gnl\|CDD\|176257	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	0

>NZ_CP053452.1|WP_171470889.1|2762248_2763364_-|HlyC/CorC-family-transporter
MGLFAIPLLVAVNGFFVAAEFALVSIRPTRVEELVNDGKTGAAALLHAITDLDRSVAACQLGITVASLALGFVSEPAVHHLIQPLMAGLPPEWTRVLSIVVTLGLITYMHVVFGEQMPKLAALQASESVGLWVAGPVNLFGRVASPLIRLMNGSSTWFLRRLGYRDTGDEGEVHSVDELRLLVEDSEQAGAIDADAADMVLNVFALADKTVRDCMVPREKMAALDVNSPPDRVMEIARLGAHTRLPVYDGTPDNIVGIVNTKDLFFLFSTSGVVLLEDALYPATFLAPDEPVANAFRLFRKSHRPMSIVRDATGAVLGLITLEDVLEEIVGDIEDEHDVPVPKLKLARRRAAGASGPQVHRPRAPEKPAGS
>NZ_CP053452.1|WP_171470888.1|2760783_2762088_-|DUF1015-domain-containing-protein
MADIRGFRGFRYDLGSVGTLSDVVAPPYDVIDTALQQKLYDASPYNAIRLELTRDEPGDDDQHNKYTRAGNTLREWVAANVIRQDTARGLYVYEQEYTVEGATFTRRGLMARVRLEAFGKGKVFPHEQTMSGPKEDRLKLYRATGFNLSPVFGLYPDEGEVFALLEPLIRSAPPLVAKDHLGVTNRLWSVTDSATVSKVIGLMGPKPVYIADGHHRYETGVKYLEERRALGEVADDEAAPNFCLMMLVGMSDPGLLILPTHRLVSGLAANVTAPQLEAALGGHFDIVERTGTDARAAWEHIEMDGAQTTLGFGTVADGQWLVAKLRDTTVMAELAPEQSDDWRGLGVSVLHKLVLDRLLRERIGGEPACKYVHLLSEVTDATAKRECQLACLVPPATMEHVERIAGNGEKMPPKSTYFYPKLLTGLVFNSLKKD
>NZ_CP053452.1|WP_171470887.1|2760250_2760547_-|zinc-ribbon-domain-containing-protein
MARTRHDDPDDDSDEYDAETDYDPDDPETYPAGLYADEERAVVPCPHCRAEIDEEAQQCPKCGMYLSREDAPREGKSAAWIVMMALAFLAALAWALGR
>NZ_CP053452.1|WP_171470886.1|2759450_2760236_+|ABC-transporter-permease
MEASPAVVTVRFNKFLPYWAVLQTDLRQTARSWVYRLWVLMTVLAAAGLLLYRVGLHKEAGLFQSAAAQSGDLFRVMVVGSLALVVVLAVSAVGSERGTVADSVLSRGISRHQYFLAKWHARLVVVTVTFAVLACAVLMASYLLFKDDTQSDLSLGGGLVAVLAVCAVLAAIVSWGVTIGALTNGTVLGITVFWLVLYGSAFLLSLLPEPWPSPERQLARLKYVLQGQYNAAVLTQLLVASGVASVAAAVVGLAGFSKRDV
>NZ_CP053452.1|WP_171470885.1|2758313_2759315_+|ABC-transporter-ATP-binding-protein
MAEATELVVETQHLTKIYQNRQIALNDVSLTIEPGCVLGLLGPNGAGKTTFLRLVLGLHRPTAGWAKVFKQTMSPNAADLRRRIGYIPTNPQFPKGMTPIVYLDYIARLFGLPADVRKPKLATLIRAVDLLPHSGDSIAHFTPGMTARLAVAASLINEPDLLIWDEPTHGLDIEARRSMLELIKRLAAEKTLIISSHNLSDVDEVCNHACVLNKGQLIFHGSLQDLKGRIRKNHYELDLDGEQKAITKTVQAVRALKDVTHAVLRHRRLDVKLGDETSNALVLAQLFQTLADHKVSLITVRSVGMQTEQAYLDLVEKEEGRGFARLYQTAEAA
>NZ_CP053452.1|WP_171470884.1|2757234_2758203_+|hypothetical-protein
MWFFLPRWDEIGALFRFAIVIPGFGFRPHERIAIARIGAFTAPEVAMRTLGYAIALGLTLLVAGPTASSPPPPVFDLGVCGTNATDIVVTDPDGVVLECWRGELRPGDIVRLGPARLTPANALPWDCLRLRPDRALSGYYRDYESQVLCGHRSHYDPGPNSQTPEGVEYKLPRIELWPTDEVSQLERRLVLFLRKEGREAAAVWAPVAVPRTDRMELGYVNKDLAWATRRVHQKFGRFSTSIAWVEAGRVLVLQASLERISYQNWSPQLTPIALDYEHFKTQVLALPAPPRLALDTKSREFTPSSHMTLTGLSTRLWAPPTK
>NZ_CP053452.1|WP_171470883.1|2756076_2757105_+|alcohol-dehydrogenase-AdhP
MANTMRAAVVRAFGKPLTIEELPVPAPKAGQVLVKIATTGVCHTDLHAVNGDWPVKPKPPFVPGHEGIGHVVAAGAGVTHVKEGDLVGIPWLYSACGHCEHCFAGWETLCEKQENAGYSVNGSFSEYCVADPDYVGRIPANADLVEIAPVLCAGVTVYKGLKVTGARPGQWVVVSGVGGLGHMAVQYARAMGLHVAAVDVDDKKLDLARKLGAAVTVNAGTTDPAAYVKKETGGAHGVLVTAVSPKAFEQALGMVRRGGTVALNGLPPGTFPLSIFDMVLGGITVRGSIVGTRLDLQEALDFAGAGLVKATVTADKLENINDVFERMHKGQIEGRVVLDLRG
>NZ_CP053452.1|WP_171476026.1|2754501_2756034_+|aldehyde-dehydrogenase
MFSRGLSFPQVAPVHAHPFAARYGNFIGGRFVEPNAGKYFDNISPINGQFLCQVPRSDAADVERALDAAHAAKAAWGAVPPAKRATILNCIADRIEAHINRVAAAETWDNGKPIRESLNADIPLAIDHFRYFAGCVRAQEGSVSQIDADTVAYHFHEPLGVVGQIIPWNFPVLMAAWKLAPALAAGNCVVLKPAEQTPASILVVTELIADLLPPGVLNIVNGFGREVGLPLAESKRIAKIAFTGSTATGRVIAHAAANNLIPATLELGGKSPSIFFDDVMAKDDDFLNKAVEGFVMFAFNQGEVCTCPSRALVQESIYGRFMERALARVAQIKQGDPLDPATMIGAQASREQLQKVLKYIDIGRAEGAELLIGGKQAHLGGALSGGFYVQPTVFRGQNAMHIFQEEIFGPVLAVTTFEDDAEALAIANDTEYGLGAGVWSRDVNRCYHVGRGIQAGRVWTNCYHAYPAHAAFGGYKHSGIGRENHKMMLDHYQQTKNLLVSYNPEPVGFF
>NZ_CP053452.1|WP_171470882.1|2753681_2754416_-|TetR/AcrR-family-transcriptional-regulator
MSTLTRRQREYADREERLLDEAGRLLVANGFDGLTLDRLAAATDFSKGLMYKHFASKEDLVAALAVRSLRVRLARFVRAAEFKGTSRERILAIEVGEELSFRQNPHHMGSELIVKMGGLETRVADDRRSALHALERECFGIARRVVEGAVRGNDLRLHPPLTPAAIVLSIMATKWGLFSTIQNYRPLLVHQGLTTPLATFRPALHAVLDGFGWRPLASEFDYEESYRRILAELFAEDAIRFGAV
>NZ_CP053452.1|WP_171470881.1|2751473_2753366_-|aspartate-kinase
MGVVVQKFGGSSVKDAERVMEAARKAIRAKNAGNQVIVVVSAQGSTTDDLIAKAAEITAAPSAREMDMLLATGEQISIALTAMAIHELGERAVSFTGPQVGIVTDSTHRKARIKKIDTQRLCEALDSGHIVVLAGFQGVDELGDISTLGRGGSDTTAVAVAAAVKLAGYDVECEIYTDVDGVYTTDPRIVPDARKMDAISYDEMLEMASMGAGVMHSRSIEFAKKFDVPLMVRNAQSDAVGTWIVPEAPWMSEIPACGVALAIDEARLVLEGVPDRPGVSHRVFAALADANIAVDMIAQSVGTGGKATIGFTVLNTELDKTKKLLAPIVTDLGATLTETGKVSKVSVVGAGMRAMSGVAERMFQALAAEGVNLKMITTGDIKISVLVEEDGAPESGVFELPSGEPIKKAHLESKKAVRGRKALKAVHSAFALAKARKGAGEQPTSSDFKPRPNPLVVAATRDREAAIARLDGMEDVLVSGAHLNLEQSRITIHDLPDRPGNCSKVFNAVATGGILVDMIVQNQSGPAKAELSFTVPRADLTRALKRTQDVVREIDPACRVVGDGDIAVLFVLGVGMRTHTGVARTMFGALAARGINISMINTSEVCVGVVVERARGEEALACLTEAFKLG
>NZ_CP053452.1|WP_171470891.1|2765079_2766243_+|TIGR02996-domain-containing-protein
MTDRDALYRAILDNPEDDTLRLVYADALEESGDPQRADFIRTQVELSHLPEYDPLWVRARCQGHGRTYNPSWTAELDLPHGIDWAQAPFRRGLPGAVQVSDGAAFVPHADELFSRYPIESLELPTLSIPEARAFAGCSRIERLTSLSLTAGIGQHVVREVLASPHLSRLTELRVGSGLTTPETVSAILRSWVFNRLTSLGVRNDQRQGGPLAGGLARLSQPPRLKKLDLSGNRLTADTLAALVASEAVAAVDDLNLSDNNLGAAGGGGGSRGAHCRPLRAAPAPPRGRRRRGWTRWSARPSSPNCGASRSPGTISDRRRPSPWPTAPSRTCASSTCARPGSGTAARLHSRTVPVSPACSNSTWPSHTSVTRGPRRWPTRRTSAGCST
>NZ_CP053452.1|WP_171470892.1|2766360_2767626_+|TIGR02996-domain-containing-protein
MSDRAALLAAICAHPDEDTPRLAYADWLDEHADTVPAPAAARAHAQFIRDDIAMWLREEYDPLRLRWVLIEKPKREAEAWVRDALPALHWGNFARDPLFRRGFPWTVTVPPASAPHAPADLTVAAPIERLGISHCGGHITELLRAAPWRRRLRAVEFDHRGNRSPTDTLSRIAFERLDRLAFRHDAITTAEARELVAAPLFRGLAAFRIVRARVGTVIPDALAHANRPGSLRELHLVECGVAQMPLADFLNSPAASGLESLSVGGDRTNSSLKFRAFGLVTDMPPLRALDVSDESPGELGIEFLLGSPFPPVLRRLDLSRCSLNRDRVRALAGGAFGALRVLWLYGNSVGNDGAVALAQSPHLSGLLVLDLGFAQVGDEGIGAILESPLADGLVLLDLTGSPASAEMKEVLKARMGDRVRL
>NZ_CP053452.1|WP_171470893.1|2767839_2769105_+|TIGR02996-domain-containing-protein
MSDRDALLAAIRAHPDEDTPRLVYADYLEEHDAPARAAFVRTQVEYARTPPWEPFAVRLRWRQPDTVSGKPFVKDLPPVPGSVIEWPSEPFRRGFAWALTLHHASMWDRFAEPLFEQFPLGKLFLSHGTLDDWVRVGASGSVRQLRELVFNVSPIEPLLVLRDKPDACGVTDLHFRRASGAGMPEVIEDLLRAPLGRAVRGLHFHTGYESLNDLIDALNTGGPLERLSFSVMGLTADLVRRLFDGPAGSALTALRVRDERLGDEGLHALAETLPAGLSDLELSKIDTRGGGLEALARCDRLAGLQRLNMSRNPLTPRAAKVLAQSRVLAGLRSLDLSECGIDARFVRHVVHSKFWWNLVELDLRKNPLAALGVKHLLDAPVPPGLAALALDGDALGGDSRLALIKKYGEAVRFVANEVQGW
>NZ_CP053452.1|WP_171470894.1|2771055_2773737_-|WD40-repeat-domain-containing-protein
MRRTFLTPLALLALMMLGSPARAGEGDPKALALQAQTVLKAHCYRCHGQEGSVEGALNYVTDLGKLVARKKVVPGDPKGSRLYRRVDEGTMPPPDEHPRPSAAEIAVLKKWIEAGAPGGERAARTTVTQNDVSAAVLADLETMDRRARRFQRYFTLTHLHNAGLSDEELQTYRNALAKLVNSLSWGSKITTPVPVDANRTVLRIDLRWFVWDATVWNRVLQEYPYGVLDDSVTARAVAVGTAAKQPLVRADWFVGTASRAPLYYDILQLPANLSELEKQIRVDAAENIRQERVTRVAFNGSGISRFNRVLERHDSAQGMYWRTYDFDEPPANLVDRINGGLVPDRRNVFAFPLGPAGLAENPFQHAGGEAIFALPNGLHAYYLTNAVNARLDKGPLAIVSDPKRPDRAVEAGVSCMSCHVTGILPKADQVLDHLAKNPRAFKPAEVEVIRALYPGKDAGLKLMEADAKKYAEAVAKTGAKVSRYEAVSTITQKYEADIDLLTAASEVGLSADAFRGRIGQSDALVKHVGSLRAGGTVSRQLWVQAFGDIVRELHLGGLYQSNLNGPTLRDNTGELDPLEARGDSANGWAFTPDGRRAVVASGDRSVRYYDVEGRRDIKRFVGHTASVWAVALSPDGKFAASGSMDGTARVWDVQSGLEVAKYTDHTSLVSAVAFVPGDGTNRGIVSGSFDGTVAFWKTADGQPAWRAEHLGLVTALAVDPRGGFVAVATENALLVLDLATGRERKRYGKFAAPLSAVAISPNGKWIAAGDDAGTVRVWLVGEDKARFTLTGHEGGVRSVAIKDGGRWVLTGGADRTLRLWDTSAAKQEVPIFRTHGAGVTGVAFLDNGTQTVSGDRDLVVLPWKIDTFLGAAPVVAPKVEPPKAPARIPHAEP
>NZ_CP053452.1|WP_171470895.1|2773832_2774141_-|hypothetical-protein
MIREPMPTTEQIRAYLTAHDWRPGWAIGSVGAMYVYRELSDDGNPLTVFVPASEAFDDYTQRVLDIADSLRVLERRDREAVLADMLATDPTPAPRTPPVPVP
>NZ_CP053452.1|WP_171470896.1|2774137_2774641_-|DUF4365-domain-containing-protein
MTDEHRMEHLSRAYVQAVAAVAGCTCARPEQDYGSDLTLRRVERVGNAFMLVGRNLDLQLKSTTTATFTTDEVVYDLDIRAYNNLRRATHGAPLYLVLFVMPPDQGEWMAQSEDRLELRHCAYWLSLRRAPAVPNTSTVRVGIPRQNRFTPEALSRIMDAIRRQEDL
>NZ_CP053452.1|WP_171470897.1|2775080_2775950_-|fumarylacetoacetate-hydrolase-family-protein
MKLATIQTPHGPRVALAVADGYIDLHATDPGLPTCIKALLAASPTVRKAAAETATSKSAVKYAANAVKLLPPVPNPSKILCVGLNYRDHAIEGGKAIPTEPVLFAKFPNTLIAHGDPIKLPKVAEKVDYEAELVIVIGKTGKHIPNTDAAFEYVGGYTVGHDVSARDWQFRGEEKQWTIGKTFDTFAPTGPVLVTPDELTNPHKLQVQLRLNGTTLQNSNTKEFIFGVPHILWFLSQVVTLEPGDLIFTGTPPGVGIARKPPVLLKPGDVAEVEIEGIGTLKNPVVAES
>NZ_CP053452.1|WP_171470898.1|2776087_2777266_+|cysteine-desulfurase
MNTSPIYLDYNATTPVDPAVLAALLPHIQDHFGNPSSAHAYGRSAHDAVEAGRVHVAALVGAEPDEIVFTGGGSEASNHAIKGACLRSGESPAALHVITTRVEHPATARPIEFLRAFGVKVTVLPVDRFGLVDPDAVKHAITPRTRLVSVMHSNNEVGTLMPVREIATIARARGVLVHTDCAQSLGKVPVDVNALGVDLLTVAGHKLYAPKGVGALFVRRGVTLDPLIHGAGHETGRRAGTENVPYIAALGRACTLAAQSLPGATDRLRTLRDRLYTRLHARLGERISINGHPELRLPNTLNVNFIGHVGAELLAKVPGVAASTGSACHDGKVSLSPVLAAMGVAPEVGRGAVRLSVGRFTTEEEVDHAADLLAGAASEAPGALTPGAGARR
>NZ_CP053452.1|WP_171470899.1|2777237_2777594_-|STAS-domain-containing-protein
MSSPVVELPLEATETDGRITVRFPASTTLAEVNAAAFARAMHGLVEGKDRPHLLIDLAGVVMLTSVILAKLVTLNATLRDTGGRLTLFNPTPGVLQVFKVTRLDSFLEVLSDAHPLPV
>NZ_CP053452.1|WP_171470900.1|2777657_2779118_-|TIGR01777-family-protein
MPNAIFEPRSPMPVSAEELYAWHARPLAFQRLQPPWEDATVVNQEGTFGTDGYRVTVRAGLVGPVSGTWVAELYDFRPGQQFQDRELQGPFAFWNHTHRFVPDTPTSSVLEDHIEYRLPFGRPGRVAAGAMVEQRLAAMFAYRHALTASDLRRHAAFAHRPRLTVAVTGSRGLIGSDLVSFLTTGGHKVVRLVTGSAAPPFDDGTKWVPWKPDGPLPEAALDGVDAVVHLAGDNVADGRWSAEKKKRILESRTGPTRNVAQAIAALPAERRPKVFVCASAVGFYGTRGDEELTEDSSPGTGFFPGVVRAWEGACAPARDAGVRTVNLRIGVALSPKGGALGKQLFAFKMGTGAVLGSGKQWQSWVTVNDIVGAIHHALYTDTLSGSVNAVGPNPVTNREFTKALGRVLNRPAFFWLPRPALRVLFGEVADEALLASTRVRPAKLVASGFHFDHTELEPALRFLLGRHIVDSSRPGYNRSASVQTLL

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Crispr_ID: NZ_CP053452_14

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053452_14

3003589-3003662

Orphan

Consensus_repeat	Method
TCGTCCTCATAGCGGCGCCGGCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP053452_14

>merge|NZ_CP053452|14|3003589-3003662|CRISPRCasFinder
TCGTCCTCATAGCGGCGCCGGCGGCGCGGGCGGTCGTCGTCATCATCCTCATCGTCCTCATCGCGGCGCCGGCG

>NZ_CP053452|14|14|3003589-3003662|CRISPRCasFinder
TCGTCCTCATAGCGGCGCCGGCG	GCGCGGGCGGTCGTCGTCATCATCCTCA
TCGTCCTCATCGCGGCGCCGGCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053452.1\|WP_171471053.1\|2994365_2995646_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171468866.1\|3020810_3021158_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171471061.1\|3007350_3008265_+\|DUF1559-domain-containing-protein	unknown	unknown	gnl\|CDD\|284919
NZ_CP053452.1\|WP_171471051.1\|2986709_2990084_+\|efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|273335
NZ_CP053452.1\|WP_171471052.1\|2990981_2994227_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|153237
NZ_CP053452.1\|WP_171471065.1\|3015088_3015775_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171471062.1\|3008344_3008560_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171471066.1\|3015941_3016964_+\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|178323
NZ_CP053452.1\|WP_171471055.1\|2998174_2999236_-\|trypsin-like-peptidase-domain-containing-protein	unknown	unknown	gnl\|CDD\|379142
NZ_CP053452.1\|WP_171471056.1\|2999680_3001123_-\|amidohydrolase	unknown	unknown	gnl\|CDD\|349922
NZ_CP053452.1\|WP_171476033.1\|2985582_2986668_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|273776
NZ_CP053452.1\|WP_171471057.1\|3001307_3001850_+\|DUF2721-domain-containing-protein	unknown	unknown	gnl\|CDD\|378544
NZ_CP053452.1\|WP_171471067.1\|3017084_3017960_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171471064.1\|3013809_3014994_-\|chorismate-synthase	unknown	unknown	gnl\|CDD\|235438
NZ_CP053452.1\|WP_171471063.1\|3008616_3009804_-\|FAD-dependent-monooxygenase	unknown	unknown	gnl\|CDD\|223727
NZ_CP053452.1\|WP_171471058.1\|3001979_3002879_+\|DNA/RNA-non-specific-endonuclease	unknown	unknown	gnl\|CDD\|224777
NZ_CP053452.1\|WP_171471059.1\|3002887_3003355_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171471060.1\|3004210_3006991_-\|aconitate-hydratase-AcnA	unknown	unknown	gnl\|CDD\|236445
NZ_CP053452.1\|WP_171471068.1\|3018200_3020690_+\|zinc-dependent-metalloprotease	unknown	unknown	gnl\|CDD\|379818
NZ_CP053452.1\|WP_171471054.1\|2995642_2998009_+\|serine-hydrolase	unknown	unknown	gnl\|CDD\|350617

Protein	Function_ID	Function_description	E-value
NZ_CP053452.1\|WP_171471061.1\|3007350_3008265_+\|DUF1559-domain-containing-protein	gnl\|CDD\|284919	pfam07596, SBP_bac_10, Protein of unknown function (DUF1559). A large family of paralogous proteins apparently unique to planctomycetes.	6.26033e-33
NZ_CP053452.1\|WP_171471051.1\|2986709_2990084_+\|efflux-RND-transporter-permease-subunit	gnl\|CDD\|273335	TIGR00915, Probable_aminoglycoside_efflux_pump, The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family. Proteins scoring above the trusted cutoff (1000) form a tight clade within the RND (Resistance-Nodulation-Cell Division) superfamily. Proteins scoring greater than the noise cutoff (100) appear to form a larger clade, cleanly separated from more distant homologs that include cadmium/zinc/cobalt resistance transporters. This family is one of several subfamilies within the scope of pfam00873. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Unknown substrate].	0
NZ_CP053452.1\|WP_171471052.1\|2990981_2994227_+\|hypothetical-protein	gnl\|CDD\|153237	cd03143, A4_beta-galactosidase_middle_domain, A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. This group includes proteins similar to beta-galactosidase from Thermus thermophilus. Beta-Galactosidase hydrolyzes the beta-1,4-D-galactosidic linkage of lactose, as well as those of related chromogens, o-nitrophenyl-beta-D-galactopyranoside (ONP-Gal) and 5-bromo-4-chloro-3-indolyl-beta-D-galactoside (X-gal). This A4 beta-galactosidase middle domain lacks the catalytic triad of typical GATase1 domains. The reactive Cys residue found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow in typical GATase1 domains is not conserved in this group.	0.000976299
NZ_CP053452.1\|WP_171471066.1\|3015941_3016964_+\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|178323	PLN02721, PLN02721, threonine aldolase.	1.02302e-119
NZ_CP053452.1\|WP_171471055.1\|2998174_2999236_-\|trypsin-like-peptidase-domain-containing-protein	gnl\|CDD\|379142	pfam13365, Trypsin_2, Trypsin-like peptidase domain. This family includes trypsin-like peptidase domains.	2.00176e-19
NZ_CP053452.1\|WP_171471056.1\|2999680_3001123_-\|amidohydrolase	gnl\|CDD\|349922	cd05673, M20_Acy1L2_AbgB, M20 Peptidase Aminoacylase 1-like protein 2 aminobenzoyl-glutamate utilization protein B subfamily. Peptidase M20 family, ACY1L2 aminobenzoyl-glutamate utilization protein B (AbgB) subfamily. This group contains mostly bacterial amidohydrolases, including gene products of abgB that catalyze the cleavage of p-aminobenzoyl-glutamate, a folate catabolite in Escherichia coli, to p-aminobenzoate and glutamate. p-Aminobenzoyl-glutamate is a natural end product of folate catabolism, and its utilization is initiated by the abg region gene product, AbgT, by enabling uptake of its into the cell in a concentration-dependent, saturable manner. It is subsequently cleaved by AbgA and AbgB (sometimes referred to as AbgAB).	2.96255e-171
NZ_CP053452.1\|WP_171476033.1\|2985582_2986668_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	2.81111e-38
NZ_CP053452.1\|WP_171471057.1\|3001307_3001850_+\|DUF2721-domain-containing-protein	gnl\|CDD\|378544	pfam11026, DUF2721, Protein of unknown function (DUF2721). This family is conserved in bacteria. The function is not known.	1.22567e-21
NZ_CP053452.1\|WP_171471064.1\|3013809_3014994_-\|chorismate-synthase	gnl\|CDD\|235438	PRK05382, PRK05382, chorismate synthase; Validated.	0
NZ_CP053452.1\|WP_171471063.1\|3008616_3009804_-\|FAD-dependent-monooxygenase	gnl\|CDD\|223727	COG0654, UbiH, 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion].	3.69865e-62
NZ_CP053452.1\|WP_171471058.1\|3001979_3002879_+\|DNA/RNA-non-specific-endonuclease	gnl\|CDD\|224777	COG1864, NUC1, DNA/RNA endonuclease G, NUC1 [Nucleotide transport and metabolism].	6.8142e-60
NZ_CP053452.1\|WP_171471060.1\|3004210_3006991_-\|aconitate-hydratase-AcnA	gnl\|CDD\|236445	PRK09277, PRK09277, aconitate hydratase AcnA.	0
NZ_CP053452.1\|WP_171471068.1\|3018200_3020690_+\|zinc-dependent-metalloprotease	gnl\|CDD\|379818	pfam16313, DUF4953, Met-zincin. This is a family of uncharacterized proteins that carry the highly characteristic met-zincin mmotif HExxHxxGxxH, the extended zinc-binding domain of metallopeptidases.	1.39873e-120
NZ_CP053452.1\|WP_171471054.1\|2995642_2998009_+\|serine-hydrolase	gnl\|CDD\|350617	cd14840, D-Ala-D-Ala_dipeptidase_Aad, D-Ala-D-Ala dipeptidase (includes Lactobacillus plantarum Aad peptidase). D-Ala-D-Ala dipeptidase (also known as D-alanyl-D-alanine dipeptidase vanX; VanX; EC 3.4.13.22) is a Zn2+-dependent enzyme that mediates resistance to the antibiotic vancomycin in Enterococci and other bacteria (both Gram-positive and Gram-negative). It is part of a gene cluster that affects cell-wall biosynthesis. The operon triggers the termination of peptidoglycan precursors by D-Ala-(R)-lactate instead of D-Ala-D-Ala dipeptides. The enzyme is stereospecific, as L-Ala-L-Ala, D-Ala-L-Ala and L-Ala-D-Ala are not substrates. This subfamily includes Lactobacillus Aad peptidase and belongs in the MEROPS peptidase family M15, subfamily D.	6.0142e-87

>NZ_CP053452.1|WP_171471059.1|3002887_3003355_-|hypothetical-protein
MYRQHDRMLEQLFFVGVFAGGLVLALILVASFVSAVGRVLRRVSPEHRRMEPAQVWLNLIPIFNFIWLTVTVERVAESLRNEFRERGMDDPEEPYGRRYGLTVLVLLATGCLFYPAFICYPIAFCYWIAYWRQLNRYAERLRSGAYVPPPVDEGW
>NZ_CP053452.1|WP_171471058.1|3001979_3002879_+|DNA/RNA-non-specific-endonuclease
MASNSPLDKLSPTQRLALAVAILVIGAVITQVRGCKQPGPAPQPGEPGQTLANRNVRFGLPAGAKPDPESRDAYLIDRPQYVLSYNDTKKVPNWVCWNLTATDVGHTKRTVSFEPDPDLPAGFHRVTSGAYTGGGFDRGHMCPSKDRSDTEENNRALFFMTNIVPQAPACNQKGWERLEAHCRDLAHKGSELYIAAGPHGQGGAGTDGKKDVIGHGPTKIEVPAAVWKVVLVLPSGDAVPDARARTIAVWMPNDQTVTDDWKKYAVTIAEVEQRTGYKFFPLVPEDVAAALKGRADAGP
>NZ_CP053452.1|WP_171471057.1|3001307_3001850_+|DUF2721-domain-containing-protein
MTAIDFLGAGQILGAMITPALLISAGGTLALSTANRLGRVVDRVRALADMAEALPDGAATPEVLEKRALIADQIGWHTQRLQLLQHTLVTIYTAIGLLVGASLTVGLSASTDWALGWIPVAFGLSGAFSLLIAAARLIRESRLAVRGSLYEIDHLRKVVARKTTHPPAPDEKPEGGQGEQ
>NZ_CP053452.1|WP_171471056.1|2999680_3001123_-|amidohydrolase
MRLFSLLAVLALPAVAGAQKDAVIKSAAAHADANWGTALKIWTWAEPGYQEKKSADALAEVAERAGFQVKRGVAKIPTAFTAEFGSGTPVIGILGEFDALPELSQEAVPFRQPRKDANSYGHACGHHLFGTASLSASIAIAEQIRAGKLKGTVRYYMCPAEEGGAAKVFMTRAGLFDDCDTVLHWHPGARNSAGDASCLARVAVKFRFHGTAAHAAGAPDKGRSALDALVLTMHGVELLREHTPDGTRLHHTVTSGGGAPNVVPEFAEGFFYVRHPKADVVQKLYPRLLKCAQAGALATETKLEVVYLGGTMEILPNDTLARVAKKNLTALNDLKYDETETRFALRLRETFGEKAPPLEEVQQVFDVSGKSSGGSTDVGDVSWVVPVVGFGTACWVPGTPGHSWQAVACGGTTIAKKGMNLAARTLAATAYDLFTDADLRAAARGELTKRLDGRKYTAMLEKDQPPPLDYRDPPKRGSKE
>NZ_CP053452.1|WP_171471055.1|2998174_2999236_-|trypsin-like-peptidase-domain-containing-protein
MTRVPLLALAVLALGFVATAPADPPRPGAPAVAPAPAGAEPKYINDDEMYEQFFDKLEELAKEKKPLAHVDLIAKLQPRPAGVTPAKPAAKALSPEEVYRAAVASVFVVGSVHPDKDGNWQTGTYATAWVVAADGVLVTNWHVFEDLKNGEVFGAADRNGTAYPLTDFLGGDKTADVAVFRIAAKGLTPLPVAPGHAEIGSWVGLISHPGDLFYVYTQGAVTRYSTNKNEDDKVEKWMGVTAEFASGSSGSPLLNKYGAVVGMAALTLSLDANDDPKKPVRRTRPLAPRRPSRGDDKKNEKPKGKAPEVPGDKPKVKDPEKPDMKPEIGKGSPQQMVVKMAVPGPIVLKWIGK
>NZ_CP053452.1|WP_171471054.1|2995642_2998009_+|serine-hydrolase
MRGTPLTASRRLSVLVLFALAPPALAQPSVPPAEPYKAAAAELEKLITHEVDDKKLPALSVALVDDQKVVWAAGFGFQDRDRKIPATAETVYRVGSVSKLFTDVAVMQLVEEGKIALDAPVAAYIPDFKPSYKEGERPITLRMLMSHRSGLIREPPVGNYFDPSEPGLAKTVASLNGIGLIYPPESRIKYSNAAIGVVGYALEKSQQEQFEKYVQRRVLDVLGMKSSSFLPKSSLKPRLADAVMWTYHGREFPAPAFELGEAPAGCMYSTVLDLAKFQSCLFAGGKLGDKPFIKPETLAEMFRPQFAAKGTTAGFGLGFMVGEFEGKPRVSHGGAIYGFATTFVALPGEKLGAIVVASRDVSNAVTGRIADDALRLMLAARAGAPLPKIEASEPFTPEEARGLAGRYRAGDRWGDLFETGGKAFFVSDRGGAIVQLRKFGGGLIADDVQAWGTKYGRADGKITIGQLVFEKEKPALDPPPAPPAAFAGLIGEYGYDHLPLSIYEREGKLHALIELTEIDPLTQESDDVYAFPADRGMYHGEKLIFTRDKTGRATKVTAASVVFERRKIDGENGETFKIKPVKPLDEIRKAALAAKPPVETGEFRAPDLVDLATLDGVKFDIRYATENNFLSTPFYTSAKAFMQKPAAEALARVHTKLKAQGYGLLVFDAYRPWQVTKMFWDATPEKFHGFVADPSKGSRHNRGCAVDLTLYDLKTGKPVEMVSGYDEFSDRAFPDYTGGTSRQRWHRDRLRAAMHAEGFSVYEEEWWHFDYKDWKKYPILNKTFEELK
>NZ_CP053452.1|WP_171471053.1|2994365_2995646_+|hypothetical-protein
MRHTIPLIALTLFASPALAQPKAPFPYAWGTAYHILPGTHTDESGYFSLCEGKNGKIYIGTAAYGLNAYLIEFDPKTNKQRIVVDVNKVCDLITPSTPTYAAQSKVHTRNYVAPSGKIYVGSKQGYRRGKDDTADYPGGYVVAYDPETDKSENLGMPLRGEGVNDVTADEKAGLVYVVTCEDHHWMILDLKTKKYREPDPALRVTPYAQTLLDAKGRAVVVTRDFKLARFDPATNKLEVGELASSGKAVGAADDKLGPACWAATADAKTAYLVRMSDPTLFRIDLTADGPKVPVAVLGKLIGGKNHDTRGSLIVGTSGRVHALYRVDNDTKFGTGYLHHLVTYDPKTEKAIDHGVLAVKNPDWFDFGPGKGGNPKPWAHGFHKLPDGTYTPLHAHMALIQAKDGTFYATIIYPFTLLKLEPHPAPK
>NZ_CP053452.1|WP_171471052.1|2990981_2994227_+|hypothetical-protein
MSRRVLIVLAAFVTLVAPATAGAQDKKPVRLFAEAEDFTVTSPGWTVMPYRDNYYAGTFAVTFLSRMGCLSAPDEIDAGKKAVAEQTITIPYDDTFELLVRYEQPFQFAAEFTVEVEQGGKVVARFPCGRLTDPKIWGLNGHKRVPMHRFEWSGTDNIVWQQPGHVKLAGGAAKLRLIATEQKDGDKPRENIAKRNVDVICLTNDKAGIEAQKKTNYLEFDGWLVQDGDAFVRFTNPKDAPQPVVPVVKPFDQGQHSPYSVHVRDWPTTLVLKSGRAVSPTNYQIAGPRSTRVKAEALAPVVDAPKGAIPDAEFLQPGDTSGWVPLGNVLDSLNSSQWVPVVNAKGKSDEVYLRLEFGTPDGKGGIKVVKNITVKGPAQNLSPACFDVPGCVNPNPDLAAALINNYWLPQIRTQKEVLDWLNTEVAKFPKLGAAPKRLPIYGIMGFGGAHAAFPEAKQLGLALGDNTTFNATGKKRELVAHWGDPSLEWITKQEKSRKGGFDDLGIVSYGDEIHLPALPLTDDEFAKWLKDTGVTVEGAVKYTTDTTHPLYYYSQIAAKEKGAARYAAGTAYYKSKGVLTGANYSPHANYLVTELDYIRPFKLKAMSMPWTEDYAWQIAEFSPQIVGYLVSGLRAGAKYDDLPIHMYVMPHSPGQVPNEFRLSYYASLAHGAKMINYFCATPSAVGATENYVDSYDLPMWKQIYTCTREAGIFEDYVVDGKVRPAKVGLLLSSTDEVITRVNNFSLALHNNERKALYYALRHAQVPVDFLSEDDVIEGRARGYSLIYVTQQYVHSKCLDALQKWCEAGGTAVAMVGGGFQNEFQKENPAAAKFYGASAGKIVADPNLVSKYLTRENVPFLSKHDLPRYEPMDAVQWCLRGLPKKEPDPNPVPEHIFNVPVIAWKQALAPTDGTVIGKFKDGAPAVVSKPHGRGRAVLFGFLPGQAYLKSGLPVRPVDRGASAESYAHYLPTSMNLVLLSRLTDDFLGRDVREAKPVVTTDGLVETTCIDTPAKDGKPARLAVPLVNWSGAELTSLTITVRGVDAASKVRSVERGELKFTQLKGGIQITMPLNVADMLLIDK
>NZ_CP053452.1|WP_171471051.1|2986709_2990084_+|efflux-RND-transporter-permease-subunit
MFTKILYRPALAIVVSILILFLGGIGAKTLPTAQFPAIAPPTVQVAITYPGASATVLVNTVLIPLEQSINGVQNMRYIQSDATSAGEATIRIYFEPGTDPNINVVNVQNRVNIMINRVPPLVRREGVLVSQVVPSMLMYVNIYSTDPAADEKTLYNFANVNVMPRLKRIQGMGIPRNLGNRNFAMRVWLNPDRMRAYKLSSEDVMKALDEQSVIGSPGRLGRASGKTSQSREYVLTYVGRYTEPEQYANVILRANPEGEIVRLKDVGDVELGSEFYDIYSNVDGHPATSIILKQSPGSNAATVIKEIKKELEQIKKKSFPPGMKYELAYDVSQFLDASIEKVLHTLLEAFILVSLVVYMFLGDVRSTLIPILAVPVSLVGTFFVLKLMGLSINLITLFALVLAIGVVVDDAIVVVEAVHAKMHAKHLSPFPAAREVIQEISGAIIAITLVMTSVFVPVTFMTGPVGTFYRQFGITMAAAIVLSGLVALTLTPVLCAMILKPHGPAGREPKPHGVRRVLLYVLGGLLALGLSCLAYYLWGPVGFLLLFAPLLQRPFDRAVETVTRGYAGVLKRTVTRRALVTGVVVAFATGIYVVNMWLPTGFIPGEDQGIIYGIIQTPAGSTLEYTNTKSRELQALAKETDGVTSVTSVAGYEVLTEGRGSNAGTCIINLKNWSARTLNARQIIAQLEAKCRQRMTDTKVEFFEPPAVPGFGTASGFSLRLLDETNATDYKRLGKVTDKFMADLKRRKELSNLFTFYTANYPQYELVINNDAAMQKGVSIGKALDNLNILIGSTYEQGFVRFNQFYKVYVQAGPEFRRYPEDLDALFIRNDRGDMVPYSAFMSVQMKEGLNEITRYNLYPSAAIKGAPAPGYSSGQAIKAVQEVAAETLPNGYDIGWEGLSYDESREGDEAVYIFLVVIVFVYLVLVGQYESFLLPLAVILSLPIGVFGSLFLLKATGLSNDVYSQIGLIMLVGLLGKNAILIVEFAVQRRQEGMPLKEAAVAGGELRFRPIQMTSFAFIAGLLPMVVATGAGAVGNRTIGTTGVGGTLVGTVIGVLVIPGLYYLFAKMADGRKLLGDETSEPISEPADNALGAHDRAHSEPDADPAVRPNPGPRSGGSVEPPC
>NZ_CP053452.1|WP_171476033.1|2985582_2986668_+|efflux-RND-transporter-periplasmic-adaptor-subunit
MGRGPRGFAATHKRTAVRRPRRHRTERSSAPTGGTVRVVRPTGDGWRPGHGERQQGQQAQRHPPGKTDAIELTLPVNDAVRRSCTAQIEYNNTNQLYESQLKVVSKQEVLEYGAKLAKARAKLQLSEAKLNFATVRAPFDGIIDRLYEQQGSLVQQGDTLTALSDNSVMWVYFNVPEARYLDYMAKLGPGQNDHQDYETRIQAFLSELNRQTRIELVLANGSTFLHAGKITTIEAKFNNQTGNVAFRADFPNPNRLLRHGQTGNILLKQTLHNALVIPVRATFQILDKRYVYVIGEDRTVHQREVVVQNELDDLFVITSGLGVNDKIVLDGVQQVRDGDEVEGFEFREPAAVLEHQKYHAE
>NZ_CP053452.1|WP_171471060.1|3004210_3006991_-|aconitate-hydratase-AcnA
MPTGNSFDSRSTLSVGGKAYTIYKLAAVEREFSQAKRLPYALKILLENLLRNEGVSLAVRKADVEALARWQPKDEPTVEIAFTPARVLMQDFTGVPCVVDLAAMRDAMKSLGGDPSKINPLVPVELVIDHSVQVDEYGTARAFADNVALEYERNDERYTFLRWGQKAFNNFQVVPPGTGICHQVNLEYLARSVFVDGHGTAYPDTLVGTDSHTTMVNGLGVLGWGVGGIEAEAAMLGQPVSMLIPQVIGFKLSGRLAAGATATDLVLTVTQMLRKKGVVGKFVEFFGPGLADLPLADRATIANMAPEYGATCGIFPVDAETVRYLEQTGRPAELVALVEAYYKEQGLFHDANTPDAVYTDTLELDLAKVVPSMAGPARPQDRVALADMKQAFADALPKLKTGTKKPTAVPLPLAAPVGEAIGGGPAGAFGAKTAPDIAPGSLADGSVVIAAITSCTNTSNPSVMVAAGVLAQKAVARGLSTKPWVKTSLAPGSQVVTDYLTAGGLIDDLNKLHFNVVGYGCTTCIGNSGPLPEAVSKEIADGGLVVSAVLSGNRNFEGRVHPEVRANYLASPPLVVAYALAGRVDIDWATEPIGTDADGRAVMLADIWPTHEEVAAVIDRSITREAFERIYGRVYEGDAQWKALQVPTGALYSWSATSTYIANPPYFRTMGVVPSAVHEIEGARVLALLGDSITTDHISPAGNIKKDSAAGKYLLEHGVAQKDFNQYGARRGHHEVMMRGTFANVRLRNRLVPPREDGSVVEGGFTRHLPGDEVVSIFDAAMAYQKDGVPLVIIGGKEYGSGSSRDWAAKGTLLLGVKVVLAESYERIHRSNLVGMGVLPLQFKTGESAASHGLTGEEVYDFGGLVAGLEKNFDGPARELTVTATRPDGTTVAFKAVCRIDTPQEVQYYKNGGILPYVLRQLNAAK
>NZ_CP053452.1|WP_171471061.1|3007350_3008265_+|DUF1559-domain-containing-protein
MPALKVRPDRRAFTLIELLVVIAIIAILIGLLLPAVQKVREAAARMSSSNNLKQMGLALHNHEGTMGRIPALVGVYTGNTSDPYYTVRGVSAITALLPYIEQDNLRKDMFDGYWTYAWWGGASGDNPYSKVIKTFTSPADASGANGLSARTGWGGCSYAANALLFAPTDGTGAMTNWDSALTIAKIQDGSSNTIAYTEKAIDCSSGNSTTDGGSLWGVEWSPWWPVVWANALGQPYLASDPLILPVRQPTQTTCDWRRPSTPHVGGMLAVMADGSVRSVSSGVSGPTLWLAAKPNDGQVLPSDW
>NZ_CP053452.1|WP_171471062.1|3008344_3008560_+|hypothetical-protein
MKPTSRLLCAALLALSGGCRGETQSTSTNPNNEVIQVPKGLTDPKAKVSAPATGMADPKAKMSALMGPKGP
>NZ_CP053452.1|WP_171471063.1|3008616_3009804_-|FAD-dependent-monooxygenase
MPRALRVGVVGFGMAGATTAYLLARDGHRVTLIERAPEVGPIGAGVLLQCSGQAVLKHLGALDRVLAHAAPIDELYARHAGSGRTLVRNRYGDYEPGCRAYGVHRGVLFNALRNLVETQPVDVRLGAEIVTREITPGGGVLLTDRTGTRHGPFDCVVCGDGSRSHLRTTFGFTASVLEYDHGTLWATVPGAGVPGKLLQVVRGTRQLFGLLPLGDGLVSLYWGLPTRDLAAVRARGLDALKREIVAFCPEAADPLDFVQDFDQLLHTTYRHVHMPRRHDGRVLFIGDAAHAMSPHLGQGINLAMVDAWRLAACLRDADTPAAAFRAFGARQRAYVRYYSLVTWFLSPFFQSDWRVLGWGRDRVLPVLPRIPVVRRQMLMTVAGLKGGFLNGRITI
>NZ_CP053452.1|WP_171471064.1|3013809_3014994_-|chorismate-synthase
MAGNTFGKLFRVTTAGVSHGPGYLCIIDGCPAGLELSVEDLLPDLARRRPGQSKLTTQRDEADAPEIWSGVFEGRTDGTPIGLLFRNGDQRSGDYGDIKDKYRPGHADYTFDAKYGFRDYRGGGRSSARETVCRVAAGAVAKKVLARAGVRVLGYVKQVGDVVADVPDPTAVTLEQVEATPVRCPVPEAAARMIALIDAVRMDRDSVGGVCELVAAGVPPGLGEPVFDKLKADLGKALLSLPAVLGFEYGAGFAVANMRGSVNNDVFAPEPTQPHESPVAADAADCNAAVWEPPGSPGAHAPGSARVRTESNRHGGMLGGISSGMPIVCRAAIKPTSSIPRTQRTVTRTGEPTEILVKGRHDPCLLPRFVPMGEAMVALVLVDHLLRSRAGRLD
>NZ_CP053452.1|WP_171471065.1|3015088_3015775_+|hypothetical-protein
MRTLFAAAVLLGAAALVPAQPPKDPPKAPPKDAPKDPPPDRDADAVPKDLGPKYGVKTRLKQYPQTTPKESLRSVLAAVEGADYTYIVAQLLDPKFVAAAVADRAKQLEPGAEAELAQLRDFQRANRDRIAPEDRVPLDPVGLRALAAVKATERGFKRLVRDVEQKLLDDPQTVKEFRRILRDGSFAEADPAASATHPDMKGRTLYFNKIGDRWFLENRQTEEPKKEP
>NZ_CP053452.1|WP_171471066.1|3015941_3016964_+|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme
MIDLRSDTVTKPTPGMLAAMSAAAVGDDVYGEDPTVNDLERHTAALFGKEAGLFVPTGTMANQIAVRVHCRPQDEILIEATSHICLWEAGGPAALSGVTCHTIDGRHGLLSVADLDGKVRPDDMHSVRTRLVALENTHNRGGGTTYSLGAVNEVSRWARANGLAVHLDGARIWNAIVKTGVAAEAWGKPFDTVAVCFSKGLGTPAGSMLLGPRDLIAHGRRVRKLFGGAMRQVGYLAAACRYALDHHIERLADDHANAQRIAKAVAEVPGFTLAPPEVETNLVWFEVDARHGTAKQVSERLKAEGILVAPLGTRVIRAVTHLGVTRAECERAAVAIRRLA
>NZ_CP053452.1|WP_171471067.1|3017084_3017960_-|hypothetical-protein
MMPLCLVALCAVGADPEPYPYPSTAPLTPPYVAEKRYPFFLKPLEKRIRAKVADLALPGAGKPEPTGSYLWQPVYKEDHILRGPTRPYVPQPGDIVMSADGSVFWKAMHNLAGTSHPTHSMIVVALPDGKMGILEGGPHDTLKCRVLEALPHMASYEKEGRVWVRARACPLTPEQSARLTEFAMATNLREFAIWRLALQLTPFRPRGPLRTAFVGKPHGIDHNSYYCSELVCEACVYAGIMDPETTRPSATYPRDIFMDHSLNPYLNRHLKLAPAWDPPARWTSYPSAPTK
>NZ_CP053452.1|WP_171471068.1|3018200_3020690_+|zinc-dependent-metalloprotease
MPIRSLLGAGLLAALVSLATPTLPALAAKQPAPKGAAKAGDLKKYDDVVTKDFATQAGVFAVHRHEDKLYFEIPQDKLGRLFLWHAEVAKGPGGGGMFGSWGGSALGHMVLKFERRGNKVYLWKVGFAKRSDGKAVQASIDASATDAIIASFAVECEGKDRAAVINVSDTFIQGLGELPLTRASGTGAGASVDTSRSYLSDVKAFPTNIEVRATLTFRTSGAGGGAPFGPAAGGAKSATAVVHQSLVALPEAPMQGRLADPRVGYFTEEFVDYSHAKHWAVAREFINRYRLEKKDPSAAVSEVVKPITFYLSKEIPEKWRPYMKQGVEDWAPAFEKAGFKNAIVCKDAPTRAEDPNWDPEDARYSVIRWVAEPVQNAMGPHVHDPRSGEVISAHIVFWHDIVKTSQIWYFLQCSAVDTKARKFPLPDDTTGAMIRYVCAHEVGHTLGLRHNHRASQAFSVSQLRDPKFCAEYGSVASIMSYGRCNYVAQPEDKVDAKHLLPKIAPYDDFAIAWGYKPIAGVKTPDEEKKTLDEWAAKQLENPFLRFGGEDGPAQVDPTVLTENIGSDPVQVTALGLKNLDRVLDHVLAATTEKGEDYELLAEVYQDMIRHRTGWLLAVAKQVGGVTENRTLGGRGGEAFVRVPKDKQKEAVKFLLDNAFTTPTKLLNPGLLNQFKYTGAATDVANLQRNLLRSLLSAARLARLADAELLSPDKAYTTVELVTDIQDGLFTELKADAPKIDPLRRQLQRAYLDVLKAEFQPAPAPTGPQVPNANVTRPGSELRAVARLTLADLETKLAAAAPKAADATTRAHIDDLRGEIGTILTADKKK
>NZ_CP053452.1|WP_171468866.1|3020810_3021158_+|hypothetical-protein
MPAVPAASRRDPAATRRRWAERLERFRRSGQTIAQFCAAEGVSPPSFYVWRRTLADHAPSPVPVTPTLVPIRLTPSPAGPPIEVVFPSGTVLRFPVDARPEVIAALVHAVEGRPC

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Crispr_ID: NZ_CP053452_15

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053452_15

3094576-3094743

Orphan

Consensus_repeat	Method
GAAGTTGCCGTCGCTCGATGTGCCGAA	CRISPRCasFinder

3 spacers

The CRISPR arrays of NZ_CP053452_15

>merge|NZ_CP053452|15|3094576-3094743|CRISPRCasFinder
GAAGTTGCCGTCCCTCACCGAACCGAAGCTGCCGTCACTTACCGAACCGAAGCTGCCGTCACTCACCGAGCCGAAGTTGCCGTCGCTCGATGTGCCGAAACTGCCGTCGCTCGATGTGCCGTCGGGGTCGGTCGGCGACCTGAAGTTGCCGTCGCTCGATGTGCCGAA

>NZ_CP053452|15|15|3094576-3094743|CRISPRCasFinder
GAAGTTGCCGTCCCTCACCGAACCGAA	GCTGCCGTCACTTACCGAACC
GAAGCTGCCGTCACTCACCGAGCCGAA	GTTGCCGTCGCTCGATGTGCC
GAAACTGCCGTCGCTCGATGTGCCGTC	GGGGTCGGTCGGCGACCT
GAAGTTGCCGTCGCTCGATGTGCCGAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053452.1\|WP_171471129.1\|3095378_3097187_-\|HAD-IA-family-hydrolase	unknown	unknown	gnl\|CDD\|340951
NZ_CP053452.1\|WP_171471125.1\|3091424_3091862_-\|TIGR03067-domain-containing-protein	unknown	unknown	gnl\|CDD\|274415
NZ_CP053452.1\|WP_171471136.1\|3105379_3106300_-\|WD40-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|225201
NZ_CP053452.1\|WP_171471134.1\|3103719_3104064_-\|histidine-triad-nucleotide-binding-protein	unknown	unknown	gnl\|CDD\|238607
NZ_CP053452.1\|WP_171471120.1\|3087214_3087844_+\|uracil-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|234653
NZ_CP053452.1\|WP_171471123.1\|3089973_3090774_-\|VTT-domain-containing-protein	unknown	unknown	gnl\|CDD\|182775
NZ_CP053452.1\|WP_171471127.1\|3092531_3093956_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226584
NZ_CP053452.1\|WP_171471131.1\|3098757_3099639_+\|UbiA-family-prenyltransferase	unknown	unknown	gnl\|CDD\|237247
NZ_CP053452.1\|WP_171471126.1\|3091935_3092400_-\|TIGR03067-domain-containing-protein	unknown	unknown	gnl\|CDD\|274415
NZ_CP053452.1\|WP_171471130.1\|3097292_3098057_+\|DeoR/GlpR-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224268
NZ_CP053452.1\|WP_171471121.1\|3087934_3088474_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171471133.1\|3103000_3103717_-\|YggS-family-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|143483
NZ_CP053452.1\|WP_171471122.1\|3088772_3089954_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171471135.1\|3104332_3105274_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|234574
NZ_CP053452.1\|WP_171471124.1\|3090906_3091344_-\|TIGR03067-domain-containing-protein	unknown	unknown	gnl\|CDD\|274415
NZ_CP053452.1\|WP_171471132.1\|3099787_3102940_+\|c-type-cytochrome	unknown	unknown	gnl\|CDD\|274225
NZ_CP053452.1\|WP_171471138.1\|3107865_3109290_-\|MATE-family-efflux-transporter	unknown	unknown	gnl\|CDD\|240542
NZ_CP053452.1\|WP_171471137.1\|3106723_3107854_+\|TIGR02996-domain-containing-protein	unknown	unknown	gnl\|CDD\|274381
NZ_CP053452.1\|WP_171471119.1\|3086638_3087040_+\|cytidine-deaminase	unknown	unknown	gnl\|CDD\|180142
NZ_CP053452.1\|WP_171471118.1\|3085331_3086642_+\|thymidine-phosphorylase	unknown	unknown	gnl\|CDD\|274244

Protein	Function_ID	Function_description	E-value
NZ_CP053452.1\|WP_171471129.1\|3095378_3097187_-\|HAD-IA-family-hydrolase	gnl\|CDD\|340951	cd17393, MFS_MosC_like, Membrane protein MosC and similar proteins of the Major Facilitator Superfamily of transporters. The gene encoding Sinorhizobium meliloti membrane protein MosC is part of the mos locus, which encodes the biosynthesis of the rhizopine 3-O-methyl-scyllo-inosamine. MosC belongs to the bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein 4 (FucP/MFSD4) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.11211e-65
NZ_CP053452.1\|WP_171471125.1\|3091424_3091862_-\|TIGR03067-domain-containing-protein	gnl\|CDD\|274415	TIGR03067, Planc_TIGR03067, Planctomycetes uncharacterized domain TIGR03067. This domain occurs in several species, mostly from the Planctomycetes division of the bacteria. It is expanded into a paralogous family of at least twenty-five members in Gemmata obscuriglobus UQM 2246. This family appears related to TIGR03066, which also is expanded into a large paralogous family in Gemmata obscuriglobus. [Unknown function, General].	1.12652e-23
NZ_CP053452.1\|WP_171471136.1\|3105379_3106300_-\|WD40-repeat-domain-containing-protein	gnl\|CDD\|225201	COG2319, COG2319, FOG: WD40 repeat [General function prediction only].	1.14761e-11
NZ_CP053452.1\|WP_171471134.1\|3103719_3104064_-\|histidine-triad-nucleotide-binding-protein	gnl\|CDD\|238607	cd01276, PKCI_related, Protein Kinase C Interacting protein related (PKCI): PKCI and related proteins belong to the ubiquitous HIT family of hydrolases that act on alpha-phosphates of ribonucleotides. The members of this subgroup have a conserved HxHxHxx motif (x is a hydrophobic residue) that is a signature for this family. No enzymatic activity has been reported however, for PKCI and its related members.	1.65017e-54
NZ_CP053452.1\|WP_171471120.1\|3087214_3087844_+\|uracil-phosphoribosyltransferase	gnl\|CDD\|234653	PRK00129, upp, uracil phosphoribosyltransferase; Reviewed.	1.6592e-103
NZ_CP053452.1\|WP_171471123.1\|3089973_3090774_-\|VTT-domain-containing-protein	gnl\|CDD\|182775	PRK10847, PRK10847, DedA family protein.	2.14011e-49
NZ_CP053452.1\|WP_171471127.1\|3092531_3093956_-\|hypothetical-protein	gnl\|CDD\|226584	COG4099, COG4099, Predicted peptidase [General function prediction only].	1.66327e-15
NZ_CP053452.1\|WP_171471131.1\|3098757_3099639_+\|UbiA-family-prenyltransferase	gnl\|CDD\|237247	PRK12886, ubiA, prenyltransferase; Reviewed.	4.50183e-91
NZ_CP053452.1\|WP_171471126.1\|3091935_3092400_-\|TIGR03067-domain-containing-protein	gnl\|CDD\|274415	TIGR03067, Planc_TIGR03067, Planctomycetes uncharacterized domain TIGR03067. This domain occurs in several species, mostly from the Planctomycetes division of the bacteria. It is expanded into a paralogous family of at least twenty-five members in Gemmata obscuriglobus UQM 2246. This family appears related to TIGR03066, which also is expanded into a large paralogous family in Gemmata obscuriglobus. [Unknown function, General].	2.79601e-13
NZ_CP053452.1\|WP_171471130.1\|3097292_3098057_+\|DeoR/GlpR-transcriptional-regulator	gnl\|CDD\|224268	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism].	6.90709e-68
NZ_CP053452.1\|WP_171471133.1\|3103000_3103717_-\|YggS-family-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|143483	cd00635, PLPDE_III_YBL036c_like, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes, YBL036c-like proteins. This family contains mostly uncharacterized proteins, widely distributed among eukaryotes, bacteria and archaea, that bear similarity to the yeast hypothetical protein YBL036c, which is homologous to a Pseudomonas aeruginosa gene that is co-transcribed with a known proline biosynthetic gene. YBL036c is a single domain monomeric protein with a typical TIM barrel fold. It binds the PLP cofactor and has been shown to exhibit amino acid racemase activity. The YBL036c structure is similar to the N-terminal domain of the fold type III PLP-dependent enzymes, bacterial alanine racemase and eukaryotic ornithine decarboxylase, which are two-domain dimeric proteins. The lack of a second domain in YBL036c may explain limited D- to L-alanine racemase or non-specific racemase activity.	1.58516e-105
NZ_CP053452.1\|WP_171471135.1\|3104332_3105274_+\|hypothetical-protein	gnl\|CDD\|234574	PRK00015, rnhB, ribonuclease HII; Validated.	0.000116916
NZ_CP053452.1\|WP_171471124.1\|3090906_3091344_-\|TIGR03067-domain-containing-protein	gnl\|CDD\|274415	TIGR03067, Planc_TIGR03067, Planctomycetes uncharacterized domain TIGR03067. This domain occurs in several species, mostly from the Planctomycetes division of the bacteria. It is expanded into a paralogous family of at least twenty-five members in Gemmata obscuriglobus UQM 2246. This family appears related to TIGR03066, which also is expanded into a large paralogous family in Gemmata obscuriglobus. [Unknown function, General].	1.07625e-10
NZ_CP053452.1\|WP_171471132.1\|3099787_3102940_+\|c-type-cytochrome	gnl\|CDD\|274225	TIGR02604, Piru_Ver_Nterm, putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) (SP\|Q44091) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.	3.03261e-55
NZ_CP053452.1\|WP_171471138.1\|3107865_3109290_-\|MATE-family-efflux-transporter	gnl\|CDD\|240542	cd13137, MATE_NorM_like, Subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins similar to Thermotoga marina NorM. The integral membrane proteins from the MATE family are involved in exporting metabolites across the cell membrane and are responsible for multidrug resistance (MDR) in many bacteria and animals. A number of family members are involved in the synthesis of peptidoglycan components in bacteria.	4.91268e-104
NZ_CP053452.1\|WP_171471137.1\|3106723_3107854_+\|TIGR02996-domain-containing-protein	gnl\|CDD\|274381	TIGR02996, rpt_mate_G_obs, repeat-companion domain TIGR02996. This model describes an abundant paralogous domain of Gemmata obscuriglobus UQM 2246, a member of the Planctomycetes. The domain also occurs, although rarely, in Myxococcus xanthus DK 1622 and related species. Most member proteins have extensive repeats similar to the leucine-rich repeat, or another repeat class or region of low-complexity sequence. This domain is not repeated, and in Gemmata is usually found at the protein N-terminus.	2.05481e-16
NZ_CP053452.1\|WP_171471119.1\|3086638_3087040_+\|cytidine-deaminase	gnl\|CDD\|180142	PRK05578, PRK05578, cytidine deaminase; Validated.	1.38492e-48
NZ_CP053452.1\|WP_171471118.1\|3085331_3086642_+\|thymidine-phosphorylase	gnl\|CDD\|274244	TIGR02644, Thymidine_phosphorylase, pyrimidine-nucleoside phosphorylase. In general, members of this protein family are designated pyrimidine-nucleoside phosphorylase, enzyme family EC 2.4.2.2, as in Bacillus subtilis, and more narrowly as the enzyme family EC 2.4.2.4, thymidine phosphorylase (alternate name: pyrimidine phosphorylase), as in Escherichia coli. The set of proteins encompassed by this model is designated subfamily rather than equivalog for this reason; the protein name from this model should be used when TIGR02643 does not score above trusted cutoff. [Purines, pyrimidines, nucleosides, and nucleotides, Other].	0

>NZ_CP053452.1|WP_171471127.1|3092531_3093956_-|hypothetical-protein
MRGLLAATVGLLLAGTGFAQPRPDPADLPAMRYELGQRLKRFEAAWEKHDGAAGRKRALVSIEPLTRQFFSFQFGEAGRGLDRATLALATEDEPGTSRQWATSLYAVPERRVVDGTARDLSVTIKPLYPVKGDVPKGLEVQLWFTDKQVISAKPDKFPFTMTVPLPPLGEFKGLDRKLYFLAEAGREVRHTGAGVTQIADLKPRLAALKKTVAAWERIDSIEKATARDRAELVADLASGTVPETDLPAADLLANAEVMLDGKPFFTAAKPGQFWMSVPTGANTATATRVFVPRGLDASRPVPVVVALHGAGGSENLFFEGYGAGHIVTECRKRGWLLVAPRSGLMFNSGPPVLEVLAELAKRYPIDLNRVFVVGHSMGAAQTVALVQKHPGKFAAVAALGGGGGVRDAAAFATVPLFIGVGEKDGVALTGARGLNKALAGAKSLTYKEYPNIEHMVIVREALPDVFAMFDRAGK
>NZ_CP053452.1|WP_171471126.1|3091935_3092400_-|TIGR03067-domain-containing-protein
MRPIHACALAVGMLVLGSVAAADESADKKALKELEGTYLLVAAEGKGVNVTEADLKKVPDADRKLVVKGEQITTYFNGKENPATVRLNASQTPAHIDFTVTKDGKTDVNYGIYKLENGVLTICALEKGDAKDRPKEFKAAGKEYLMVLKKHDAK
>NZ_CP053452.1|WP_171471125.1|3091424_3091862_-|TIGR03067-domain-containing-protein
MTRSATALVLLAFSLTGLARADEKALKELEGTYKLVTVERDGKAADKALIDTVTVTIKGGEFIMTFSPEDKKVAKITATADPKLSTIDLAPQDGEAKGKTFPGIYKLEKGEVVLAFSEKGDRPKEFKSENETTFIRMKKVEKTEK
>NZ_CP053452.1|WP_171471124.1|3090906_3091344_-|TIGR03067-domain-containing-protein
MRTLTAAFVLALAGWAVGAADDPKDAAKKLEGVYEVLDVTIGGKPDPKKDGIKGVEIKNGEFVIKLDKRNDPAKFTLDPTQSPAHIDISPDGTNKVPGIYQVKETDTGTELIVVIALADKGERPKDFKGGGKDHVMLKLLRKKAK
>NZ_CP053452.1|WP_171471123.1|3089973_3090774_-|VTT-domain-containing-protein
MEDFFTQVWKILETLFDFRNLSHPERFEAALNQPGVFWAALVAVNIIVFTETGLLIGFLLPGDSLLVVLGIVAQLSGWGLVPFIASLCCAAIIGDTVGYWIGNKAGPAIFSRPSSRFFKQAYLLRAKAFYEKHGGKTIILARFVPIVRTFVPVVAGAAKMNYRTFLSYNVIGGVAWIVSMLLFGYYLIPIANPPMQKLLGDPNFTWAKQIDKVVIAVIFVSVLPIAWKAGRHWLDKRKPPTTGSPAVPAVAASVAAETPSPSPTSP
>NZ_CP053452.1|WP_171471122.1|3088772_3089954_-|hypothetical-protein
MSFQASGTVKCWKKYDCLGCGAVYRHRFSRSVTGGGMTAQHAEANAQRAGMKALLNKVDPCPCPECGRVQPRMVGHTKLWEHKVVTSITFGVLAFVTVLGATSAMGREVAALAAFSVAGLGALAHLWYAGSNPNSNPEANKEHAAGKVDAGEVEVLRPGDTSFGEPAPPLVTRSHLVYFALGLGAAALALVPVAVRVANGWALGPTDPPVFGPGDTFRVTFPNKIDCVRSTWNGTPKVTFNGNVPGAIVSSNTATWGTSMSIKASETHTSPTLWADITLPDDPHLSNSEVSGRVEMTVSYPQANGPRGMSDGQTVIETAFRVQLATPYAWQTYRQAWWVGLLACTVLSALAGWGFAGLASRMKWGSPPGLVESIDTPPSDQPHEAPNRPQSRL
>NZ_CP053452.1|WP_171471121.1|3087934_3088474_-|hypothetical-protein
MHRLSCLLLAAGVALVGSARGDDKPVVVKLDKLSAPVPAEWKKEKPSNLLRTYQFKLPGAKDHPDAELAIFNQSLPGADKNFPKWKGSFVVPDGKTVDDISKTAKWEVPGAKVDVLDVSGTWKYKERPQDKKETLLDDWRVIWVIVDEKDETFHLRLSGPAVTVAEHAAKFEKWVKSFK
>NZ_CP053452.1|WP_171471120.1|3087214_3087844_+|uracil-phosphoribosyltransferase
MPAPVSVSTHPLIQHKLARLRAAATKPPEFRALVAAISHGLFFEATRDLRLAPIGVETPLTQTTCQHIADRVGLVPVLRAGLGMAEAMLEALPEAVVWHLGLYRDHATLKPVTYYNKMPPKPDMDVALVLDPMLATGGSAIAAIDILKTTGTPRIIFAGLIAAPEGVAALQAAHPDVPVFLAALDSRLNEVGYIVPGLGDAGDRQFGTA
>NZ_CP053452.1|WP_171471119.1|3086638_3087040_+|cytidine-deaminase
MTDPLVTAATAARERAFAPFSKFRVGAALEAPDGTIVPGCNVESASYGLTMCAERAAICRGVGDGFRCFKRVAVVTDTEAPTPPCGACRQLLWEFAPDAEVLLANLTGAVVKWTVRDLIPGAFDAKQLTRRES
>NZ_CP053452.1|WP_171471118.1|3085331_3086642_+|thymidine-phosphorylase
MRPGDVIQTKRDGGELSHAQIAAFVNAAARLDGSGWEKYHLTALLMAIYLKGMTPAETAHLTRAMAESGTRLDLADIAGPKVDKHSTGGVGDKTSLILGPLAAACGVVVPMMSGRGLGHSGGTLDKLESIPGFNVNLTEAQFRAALRKVGLGMIGQTADIAPADKTLYALRDVTATVESIPLITASILSKKLAEGISGLVMDVKCGAGAFMKTREQARALAESLVAVGTANGLRVSALITAMDAPLGRYVGNALEVIESIEALKGNGPADLTDLSVKLAARMVELAGIATGPDAEAKVRTALSSGAGLDVFRKCIEQQGGDPRVIDDYSRLPRAPGTVPFVAGTAGSITSINAEQVGIAVRVLGGGRNRAEDEIDHRVGIIVRAKPGEYVTADQTVFELHGCDAAKMSQAAAILSGAYTLGEAPPPEPPLVLGELT
>NZ_CP053452.1|WP_171471129.1|3095378_3097187_-|HAD-IA-family-hydrolase
MSEERRSTTNLKVAISGWFLLNGFVVASWVAHIPRQATALEIPPDTLGLVLLGMAVGSILGMTVAPTAIRRVGADRAAWMAGIVYTLLIPLPLLAGSVVALGLSLVLLGAFHGLLDVTMNAAAARYERDLGRPVMSAFHGWFSVGMVVGVTGGSAALAAGLAPAAHAAIVVGIGVGLLLMCRPTARSTPDGPTVARETRPRTVDHRAYALAAIAFVCLFLEGAMADWAGLLAVAFGAGPAVAPLAYAAFTAAWAGGRFLGDRLTASVGDVVIVRTGGLLAAVGVGFALLAASPGGVAIGCAVAGLGLANAVPVLFRAAAGTDPAGRGLALVTGIGYAGFLVGPPLVGFTAAAVGLPRAMLLVVAGGVLLSFGANALRRRRPAVATGPAGIDCRAVLFDMDGTLVDSALACEVLWREWAARVGVDPAPILAVHHGRRPEETLRLTYPEHATAETADWLQTRQIGVTDGLKAVAGAAALLDALADRPWAVVTSASRALAESRLRAVGLWRGGLLIGADDVTEGKPSPEGYLAAARALGVSPGECVVLEDAPAGVEAGTRAGMAVVAVTTTHAPTALATPHVVRDLAGVSATLDDKGGIRLVLIG
>NZ_CP053452.1|WP_171471130.1|3097292_3098057_+|DeoR/GlpR-transcriptional-regulator
MSPKERRKEIVELVDSGEPSTPAELATRFGVSEDSIRRDLRVLADRGLVRRVHGGALPRSPAAIPYGERVEQQPLVKQRIAARTADRLAALRAVCLDGGTTVLEVARRLPSEFRGTVVTVSLPVATELAARSGVEVVQLGGRVSGFSHTVIGSDVVDALRRYRFDVCVLGVCSLDPRAGLTVPDRDEAFVKAAMVERSASVVAVASRTKLGTAEPFLVAPASAVGTLVTDADPHEPLVEALMGMGVEVVCVPGE
>NZ_CP053452.1|WP_171471131.1|3098757_3099639_+|UbiA-family-prenyltransferase
MPTVARKLLELIRFSHTVFALPFALLAAALAWKDEPARWQDGVGILLCMVFARSAAMAFNRIVDRRIDAANPRTANRHLPAGTLSVGVVWAFTFLCCAGFVASTLLFYVRVPENPWPLYLSVPTLLFVMGYSLAKRFTSLAHFWLGVALMLAPVAAWVAVRGFTDMAPPLLLGLAVAFWVAGFDIFYACQDAAFDVATGLHSVPARFGVATSLRIAAACHAVMFGLLVGLYFASPHLGGVFLAGLGAVGALLVYEHRLVRADDLTGVNRAFFHVNGVISLGLLAVVLVQLALR
>NZ_CP053452.1|WP_171471132.1|3099787_3102940_+|c-type-cytochrome
MRPVLSFIALLVLAASALGQPKLPNLPPDLMAPTDALTPADERKQFTVPDGFDVQLVAAEPDIQKPIQMAFDARGRLWVTTSYHYPFAAQGKATDKLFVLSDFDPATGKAKKVQTFADDLNIPIGILPLPDCKSCIVSSVGEIRKYTDTTGAGKADKMEVLYSGFGSRDTHGMYNSFTLMPDGWVYACHGFSNDSTVRGKDGHEVKMNSGNTFRFRPDGSRIEVWTRGQVNPFGIAVDPWFNLYTADCHSKPITQLIPGAYYDSFGKPHDGLGFAPHVTHHDHGSTALCGLTWYDADQFPKEYKGTMFLGNVVTNRVNFDAITWKGATPVAKEQPDFLVSKDRWFRPVDIKLGPDGALYVADFYNKIIGHYEVDLKDPRRDKDRGRVWRIVWRGKDGKAPAAEAPRADFTAAKDDELLDDLLHPNLTVRLLAGNQLRSRSAAGTRLESDGLLSRLTKNRDRAESVWAWAAFILAAGKEPPQKNFYWAAVEYAKDPQNGIKPEHLTGHLVRALAGRSQWGDDERKLLLDVFKSLDSPHLTRAAVEAVIAHPHADLVAPVIAALKKCAPDDTHLRMAAKIALRNCLRDDPKAWPPYKDDKVLKKDFDPSYAEIALAIPNGLAADYLLSQLDEKRIAEPRLVATAEHIARYGDWYAAIADITRAKTGSPALLGDALLGAFRGVQARGARLDEFAAQRVLAFTANQLKQADPTGPLDEVSLQRLSCAARVLIALPAVTKEWGKVPVPEPIASRLEGWVEQPNVPADLRAASADALLRVAPEQGLTTLRKLIGDTKLPPAFQERLLVVLASSGNREARLDARDALKTVPYRIAVPVATSLAGTRDGADLLLIAVKDGKAPARLLQEKAIRERLRGSDAPDWQKRVTDLTKSLAPADQRIADLIKTRATGFATAKADKVEGAKLFTKHCAACHRIGDTGGKIAPQLDGIGVRGAERLFEDVLDPNRNVDQAFRARSITLTSERTLTALMLRVEGEVLVVADLEGREQRIPLKDIAVNRETMLSAMPANFADVVPEADMYHIVAYLLDQKAKDPPKK
>NZ_CP053452.1|WP_171471133.1|3103000_3103717_-|YggS-family-pyridoxal-phosphate-dependent-enzyme
MTDTELRAVLADRVAGVRARITDACRRAGRDPAGVTLVAVTKSVTPRVAAVAAELGCRDLGEGRPQELWKKAEAVPGVNWHLVGHLQRNKIDRTVPLAALVHSVDSERVLDALDAFGRKRGVPVPVLLEVNCSGEGSKGGFAPDAVPAACDRAGTLAGVTVRGLMTMAAYADDPQATRPTFVTLRELRDSMRTRSGLPLADLSMGMSNDFEVAVEEGATLVRVGTTLFEGLEPASGAA
>NZ_CP053452.1|WP_171471134.1|3103719_3104064_-|histidine-triad-nucleotide-binding-protein
MLADNLFLKIIDKTIPAKIAYEDDQCLAFHDIRPQAPVHVLIIPKKVIRTHDDATAEDQMLLGHLHLVAIKLARQLGLVEGYRLVVNCNEHGGQTVPHLHMHLLGGRDMTWPPG
>NZ_CP053452.1|WP_171471135.1|3104332_3105274_+|hypothetical-protein
MPWVVGIDEAGYGPNLGPLVQAAVALRLPEGDPAGWATLASVVRRAHERPDGRLLIDDSKKVYTRGGLEALERGVWSITGADPRPLHEFLWSGDDVPAWGDELCAEAWFDGDDAVPLHIAPDAEWAASEPVRGAIGGQWTGDYRIVPAPRFNRMVDEYGSKGTVLGRGLIELLGALTGAVPQDGEPLLFACDKQGGRNFYGSILQEAFPDGWVVAERESADESRYRVEGLPREVTITFRPRADGDSVSVALASMVCKYLREVCMWQFNRFWAGHVPGLQPTAGYPVDAKRFYAEIRPAMDRLGLTADQVWRKK
>NZ_CP053452.1|WP_171471136.1|3105379_3106300_-|WD40-repeat-domain-containing-protein
MRVLRTAPGEVLDVAFSPDCRAVAAAVEGKGVFLWNLDSPTIAPVRYDAEDGYRPGGLGFSPDGRQLAWLTLNGRRTHDRDTRAAMTAAFPLYNANGMYHCSDAAGTRAVSNHSFPDHTLIGWKWVGDEWVHQWKLSTRELFVGRMTLAPAGDRFAMVTCVTQGGRWWEQPMRLEVRDAATAVELAAGSYPYRYAPRLQFHPTGCQVAGINNMTLLAWPLPAGGDPRLVQNDNRKHFTALAYHPNGHRLFVTSNDETVHVFDTQSLDRVSRYTWQLDKLSAVTISPDGSLAAAGSGNGNVVVWDLD
>NZ_CP053452.1|WP_171471137.1|3106723_3107854_+|TIGR02996-domain-containing-protein
MTDETALLRVIAAHPDEDTPRLAYADWFEEHGNPDRAAFIRGQIELARLETDSLHRRAVAFQCRTLLDTHEEDWLDPRDAFSFDWNWARGFVETFTTSPADLDVQDSALFRTHPFRRLWLWELNGSADGVELIPAGNALTALDLIGNNLNVNQLKKLAKAKHLPHLRELGLMFNALRDTAVKVLCGEPFFQTLDLIRLGANPFTDRGRDQLRAHFGARVTFAHDREPDRLYAIRDDFFNVGWGTEFTQFFLLAGEHQQRLAVFDHAGNLLRTEDRDVPHPVGADYHKRAINREAARDGWLEELGYRSETIKVKRFQFADAVGLTPFNTWADVFDGREAGPYDIRGSLTRWLEEGQYRFTVGGNDHWLDRSGEMTAL
>NZ_CP053452.1|WP_171471138.1|3107865_3109290_-|MATE-family-efflux-transporter
MNAPAVPPDRLSKPLWRQVLALALPALAQQYLHLVVQLSDQYLAGRFELPDPQQRTGYLSALNTAGYLYWFVSSYTVLVSVGSTALVARFVGAGNWPLAKHATGQAVVLAAVFGVLGAAAALVGLPDLIDALQLHGAAARVCVEFLTPLAALLVFQITESACAACLAGAGDTRTGLKVLGLVAVLNVPLAWGLCFGIGPWAGLGFVGIALGTGLSHVIGCVTLLVILARGRSGLKLHLANLVPDFPLIRRLLWVSVPAAVDSLSAAFCQLWFLSIVNRLGDTAAAAHGIALRWEALGFLSGAAFGTAAMTLVGQNLGAREPARAARCGWAAFAIGGAVMSGMGLLFLLFARPMFRVFCPDPHLSGIVETGAPALRLIACAMPALASQIVFTAALRGAGDARVPVLFSWCGFLGVRIPLAYLLTAPRVDLGALGVVPGADMGLFGAWIAMCTDLWVRGAFFAVRFASGKWKTVEV

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Crispr_ID: NZ_CP053452_16

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053452_16

3136328-3136432

Orphan

Consensus_repeat	Method
CCCCCTCCCTGCAGGGAGGGGGTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP053452_16

>merge|NZ_CP053452|16|3136328-3136432|CRISPRCasFinder
CCCCCTCCCTGCAGGGAGGGGGTGAACGCGCGCGAAGCCTCCTCCAACTCTCCAGAGGCACCGGAACTCCGTAGGTCTTGCCCCCCTCCCTTCAGGGAGGGGGTG

>NZ_CP053452|16|16|3136328-3136432|CRISPRCasFinder
CCCCCTCCCTGCAGGGAGGGGGTG	AACGCGCGCGAAGCCTCCTCCAACTCTCCAGAGGCACCGGAACTCCGTAGGTCTTGC
CCCCCTCCCTTCAGGGAGGGGGTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053452.1\|WP_171471156.1\|3130323_3130650_+\|multidrug-efflux-SMR-transporter	unknown	unknown	gnl\|CDD\|224987
NZ_CP053452.1\|WP_171471166.1\|3147918_3149175_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|334588
NZ_CP053452.1\|WP_171471163.1\|3141563_3142388_-\|uracil-DNA-glycosylase	unknown	unknown	gnl\|CDD\|235376
NZ_CP053452.1\|WP_171471161.1\|3136471_3137692_-\|FtsX-like-permease-family-protein	unknown	unknown	gnl\|CDD\|130253
NZ_CP053452.1\|WP_171471165.1\|3145516_3147424_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|372641
NZ_CP053452.1\|WP_171471157.1\|3130863_3131979_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171471164.1\|3142813_3143317_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171471162.1\|3139461_3141432_+\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_CP053452.1\|WP_171471159.1\|3133151_3134702_-\|MBOAT-family-protein	unknown	unknown	gnl\|CDD\|224610
NZ_CP053452.1\|WP_171471168.1\|3150096_3151236_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171471169.1\|3151287_3152444_+\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP053452.1\|WP_171471160.1\|3134976_3136320_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|274374
NZ_CP053452.1\|WP_171471154.1\|3127517_3128315_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|130156
NZ_CP053452.1\|WP_171476039.1\|3124130_3126380_+\|translation-initiation-factor-IF-2	unknown	unknown	gnl\|CDD\|235401
NZ_CP053452.1\|WP_171471153.1\|3126891_3127422_+\|30S-ribosome-binding-factor-RbfA	unknown	unknown	gnl\|CDD\|234787
NZ_CP053452.1\|WP_171471167.1\|3149174_3150095_+\|Bpu10I-family-restriction-endonuclease	unknown	unknown	gnl\|CDD\|370555
NZ_CP053452.1\|WP_171471158.1\|3131975_3133133_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171476040.1\|3143867_3144806_-\|replication-initiator-protein-A	unknown	unknown	gnl\|CDD\|370826
NZ_CP053452.1\|WP_171471152.1\|3126428_3126755_+\|DUF503-domain-containing-protein	unknown	unknown	gnl\|CDD\|377364
NZ_CP053452.1\|WP_171471155.1\|3128954_3130214_+\|pyridoxal-phosphate-dependent-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|223234

Protein	Function_ID	Function_description	E-value
NZ_CP053452.1\|WP_171471156.1\|3130323_3130650_+\|multidrug-efflux-SMR-transporter	gnl\|CDD\|224987	COG2076, EmrE, Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism].	4.79849e-31
NZ_CP053452.1\|WP_171471166.1\|3147918_3149175_+\|hypothetical-protein	gnl\|CDD\|334588	pfam01555, N6_N4_Mtase, DNA methylase. Members of this family are DNA methylases. The family contains both N-4 cytosine-specific DNA methylases and N-6 Adenine-specific DNA methylases.	5.96751e-08
NZ_CP053452.1\|WP_171471163.1\|3141563_3142388_-\|uracil-DNA-glycosylase	gnl\|CDD\|235376	PRK05254, PRK05254, uracil-DNA glycosylase; Provisional.	3.24818e-135
NZ_CP053452.1\|WP_171471161.1\|3136471_3137692_-\|FtsX-like-permease-family-protein	gnl\|CDD\|130253	TIGR01185, membrane_spanning_subunit, DevC protein. This model describes a predicted membrane subunit, DevC, of an ABC transporter known so far from two species of cyanobacteria. Some experimental data from mutational analysis suggest that this protein along with DevA and DevB encoded in the same operon may be involved in the transport/export of glycolipids. [Transport and binding proteins, Other].	1.99301e-99
NZ_CP053452.1\|WP_171471165.1\|3145516_3147424_+\|ATP-binding-protein	gnl\|CDD\|372641	pfam13589, HATPase_c_3, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. This family represents, additionally, the structurally related ATPase domains of histidine kinase, DNA gyrase B and HSP90.	9.21916e-17
NZ_CP053452.1\|WP_171471159.1\|3133151_3134702_-\|MBOAT-family-protein	gnl\|CDD\|224610	COG1696, DltB, Predicted membrane protein involved in D-alanine export [Cell envelope biogenesis, outer membrane].	1.94789e-78
NZ_CP053452.1\|WP_171471169.1\|3151287_3152444_+\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	7.78642e-70
NZ_CP053452.1\|WP_171471162.1\|3139461_3141432_+\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	1.47563e-24
NZ_CP053452.1\|WP_171471160.1\|3134976_3136320_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|274374	TIGR02982, heterocyst_DevA, ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.	1.25564e-87
NZ_CP053452.1\|WP_171471154.1\|3127517_3128315_+\|hypothetical-protein	gnl\|CDD\|130156	TIGR01084, A/G-specific_adenine_glycosylase, A/G-specific adenine glycosylase. This equivalog model identifies mutY members of the pfam00730 superfamily (HhH-GPD: Helix-hairpin-helix and Gly/Pro rich loop followed by a conserved aspartate). The major members of the superfamily are nth and mutY. [DNA metabolism, DNA replication, recombination, and repair].	5.94735e-09
NZ_CP053452.1\|WP_171476039.1\|3124130_3126380_+\|translation-initiation-factor-IF-2	gnl\|CDD\|235401	PRK05306, infB, translation initiation factor IF-2; Validated.	0
NZ_CP053452.1\|WP_171471153.1\|3126891_3127422_+\|30S-ribosome-binding-factor-RbfA	gnl\|CDD\|234787	PRK00521, rbfA, 30S ribosome-binding factor RbfA.	2.34003e-40
NZ_CP053452.1\|WP_171471167.1\|3149174_3150095_+\|Bpu10I-family-restriction-endonuclease	gnl\|CDD\|370555	pfam09549, RE_Bpu10I, Bpu10I restriction endonuclease. This family includes the Bpu10I (recognizes and cleaves CCTNAGC (-5/-2)) restriction endonucleases.	3.91023e-114
NZ_CP053452.1\|WP_171471152.1\|3126428_3126755_+\|DUF503-domain-containing-protein	gnl\|CDD\|377364	pfam04456, DUF503, Protein of unknown function (DUF503). Family of hypothetical bacterial proteins.	1.04634e-21
NZ_CP053452.1\|WP_171476040.1\|3143867_3144806_-\|replication-initiator-protein-A	gnl\|CDD\|370826	pfam10134, RPA, Replication initiator protein A. Members of this family of bacterial proteins are single-stranded DNA binding proteins that are involved in DNA replication, repair and recombination.	1.33775e-104
NZ_CP053452.1\|WP_171471155.1\|3128954_3130214_+\|pyridoxal-phosphate-dependent-aminotransferase-family-protein	gnl\|CDD\|223234	COG0156, BioF, 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism].	6.41553e-97

>NZ_CP053452.1|WP_171471160.1|3134976_3136320_-|ATP-binding-cassette-domain-containing-protein
MGPSHLPPPGQPVLRIRGVNHYFGTGDTRTQVLFGNTLEVMPGELVIMSGPSGSGKTTILTLIGGLRTLQEGEIEVWDADRGDYRTLRGTPEPELVTVRRLIGFIFQRHNLFDSLTAVQNIRMAQRLKENGPADPDRDARDLLTYLLLGERDLSGNPQKSRFDYKPAALSGGQRQRVAIARALINRPKLVLADEPTAALDANSGLAVVTLLQELARERSAAELRALVRAAEEAGENGRLAEWQVVLLKRIANEHGTTSLIVTHDARIMNLADRIVHMERGRIESNVVVAERLFVREGLRQSPAFAAILPEEQEKIADAVLIGVHPNEAVRPDQLAARPGRVEVYEPGQVIVREGDPVNELSKFYLIRRGTVEVLRAANGAPQKLTEMGPGRYFGEVAFLLNQPRNATVRALTRAEVYTVDRATFDKFRSVSLPFVERMLANFRAGEG
>NZ_CP053452.1|WP_171471159.1|3133151_3134702_-|MBOAT-family-protein
MPFLLAAAEADTIAKATADAAHASAPVYFQKLHNLLPAPFFHTPGFLAFFAIVLAVYWFIPRRWQMARVWVLVVASFHFYAAWSYELAFLVTGTTVADYLFGRVMGLSKRPGFRRLIVVASIVMNLGILCYFKYRGFFLNELYDGLRALGAQPGFEKLNPLAVFVPFGISFYTFEAISYAVDVYRRKIEPETSLPRFLLFILFFPHLVAGPIVRAGDFLTQARRPKRWNWVRVQAGVQLFLIGAFKKMAIADRMALFCDPVFKDPEHYSTSAVWLAVLAYAVRIYCDFSGYSDMAVGAAHLLGYKLVNNFNMPYLATNVSDFWRRWHVSLSTWLRDYVFIPLGGSRGSRWLNYRNLLVTMTVGGLWHGAAWGYILWGLAHGLMLVAHRQFRDYCEGKPRLTAFLETAFGTGLRIVLTFVCVSLCWVLFQPELSKALAIYAKLFQFQRGVGLPLNNSILWYLVGFLFACQWLVRSGVWAKVYPRLPAPVLGTGYAVCLCAALVLAPDNGTTFIYFQF
>NZ_CP053452.1|WP_171471158.1|3131975_3133133_-|hypothetical-protein
MTERTTARTLPQFARRLVSVRLKRPVVVRAPTRTPQRRTATRRAAQALGAGLVVFALLQIGLAVAARSALISDPFYGDKERLLRRVERAGAPGAVKVLALGSSRTEHGFAAGNVEHAAGAAGRPATAFNFGTSAAGPVTNDVYLRRLLADGHAPALLLLEVLPVLMADTGAEPPETRTLAADRLSWAETDRLVGRYEFPAQFRADRAAADGLPWQSHRFKLLGRVAPKTLPYQLRFNTSRMTDAHGWLPPAGGPGPDPQAGARTVAAYRDTLRDWRPGAAPAAALRDTLALCRAEHIDVALVLMPEASMFRALSPPVVQRRLSEFLAGTSAAFGCRLIDARDWVPDDGFLDGHHLLRPGAVVFTDRLTAEVIVPYLRDRSAGVKP
>NZ_CP053452.1|WP_171471157.1|3130863_3131979_-|hypothetical-protein
MIARALEMTILPLTRVFARSAPARPRGADRRRSARWVLLYGVLAFGLLTLALETAAETVRPEWRDPEYGYRLRAVRRWQRERPDRPLVLVLGSSRTQFGVSPADMNLPDEPGAPLVYNFGYTSAFPLGMWFQLSRLFDDGIQPAVVLVEFASIHTRIDGPAEVQFELMGLRLSAGDVRRFAPYTSDPTVFGRQLDAARRNPWASRRPALMGDLLPDWRTADVRANNRVWESMDPYGRIFFRLEGTVDPTRRLREEGRKHASGLDAGEPGAVSDRALRDLAAACHARGIKLALFRAPESPEYRTMYTPAGRTSFDEYARTLARDFGAPVFPAPDMDEADFADGFHLLPAGAAKYSRWLAERHLKPWLAEALR
>NZ_CP053452.1|WP_171471156.1|3130323_3130650_+|multidrug-efflux-SMR-transporter
MHWLYLIAAGCFECSFTTCLKLSEGLTRTGWTVAFVLLSVVSFGLLTLAAQKIPLGTAYAVWTGIGAVGTALVGIIWFKDPATFWRLFFLAGVIGSLIGLKLVSPDHD
>NZ_CP053452.1|WP_171471155.1|3128954_3130214_+|pyridoxal-phosphate-dependent-aminotransferase-family-protein
MPAPLDRLIDSLSRTGMTRFFRRMFDDYPDLLMKDQQVDEVGPDRAIKLGGRWVTNFGSDSFLGLDQDARVKAAVERGVRAWGTHNGSSRAFSSVEPNVRAERKIARWMGTEAALIYPSVTLANTGALPGLVTRQDVVVADQYAHNSIDEGLKLAKARGVRTAKFAHNDPAALDETLRALQPYRYAVVAVDGVYSMSGQLPPLAEFRSIARDRSACLYVDDAHATGVLGACGRGTVLEALDGYDNVLSVGSLSKGFSCLGGFVAGKQAAIDVLKLRSNSLIFGGPVPPPYLEAVCEVVDILSSAEYPVLRAKLDANVRRLSEGAARIGLAVMGGLVPIVSVLVGPEEATLKAGKFLYERGYYVQSVVFPAVPHGAGVLRMQVNANHAPAQIDALLDALAALKQSAALPEPSALAALMAA
>NZ_CP053452.1|WP_171471154.1|3127517_3128315_+|hypothetical-protein
MPAITNKQQLLTHAQAALKKRFPLPELEPEAPRPLLEELLFAICREGSTTEDAVAAYDRLRKTFVDWNEVRVSTVQEVADALRPLPHAGPRAGWIIGVLHAVFEMNYSYDLGDMEKKGLKQAAKQVSRYFNDSDLKKLGLKQAAKQIARFKQVNDFAVAWVVQRSLGGHAIPLDGPTVRVLQRLGVVEEVDPDDLESLRGGIEHVIPKARGPEFTELMSIHAKELCTETAPHCTKCPLLSECPAGQELTKKPAKDAAEPKPKKSR
>NZ_CP053452.1|WP_171471153.1|3126891_3127422_+|30S-ribosome-binding-factor-RbfA
MKSHRLARVSEVIRETAANAILFELKDPRVKNVTVTRAEVSGDLQHAKVFVSVMGSEREQQLTMHGLKSAAGFVQTKVADRLTSRYVPHVTFVLDEGVKKSIEIGRLIREETERLAADHPSGATGAHGAETPEEDEDAEEEDAGAAPADPNSPPPARETARAPGAAAADGSTDRPT
>NZ_CP053452.1|WP_171471152.1|3126428_3126755_+|DUF503-domain-containing-protein
MFRVPRPALFDMVIGSLQCRLLVRESRTLKDKRQVVRSVLDRMTAAFNVSAAEVDTHDDVKVATLGFAAVGFEHAAVRGALQKIADALRVHPVAEYLGGEIAVGSEVV
>NZ_CP053452.1|WP_171476039.1|3124130_3126380_+|translation-initiation-factor-IF-2
MIDRLRAASARGQRLTLTDVARTPAAAPGQPNKPGEGPARPGGPPRPGAAPAARPGEAVDDEEEKKKSGVIGRDSRHKNRGSDRGRSSGGPRVDRGSVILGPGGQVDLIDQQSGSRRGPRAALLRKAQRRGEIKPIIKEGKIEIGLPITVRSLSEAIGMKTGELAKRLLKETNQLYGNNSPVDFDTAALIAVEKNIELVVKRQKTAEEILIEEFEQMATNVDPEKLRPRPPIVTIMGHVDHGKTTLLDRIRQSNVAAGEVGGITQVIRAWSVMHKVKDPETGEKVIESPITFLDTPGHEAFTKMRARGANVTDIAVIVVAATDGVMPQTEEAVAHARAADVRIVVAINKVDAPNANVDRTRRQLYNLSLLPDNMGGDVQFVETSALTGQGIDDLLDAIVIESEINLAGELLADPARPAFGTCLEGYMTADEGVMATVLVQQGTLKKGDILLCGANYGRVRSMQNDQGVNIEEAGPSTPVLVTGLGGVPNADDPFYVVEELTTAAKIAEARETKDREKTLNRFAPVNVENFAATKSKQKITELKIILKAEARGSVEAIRKELEKLTHEEVTTRILHAGIGAITESDVQLALTSPEDTLVIGFNVTADDAAMHLAEERDISLREYQIIYNLVDDVKAQLEGRLKPIEEVVHLGRAVVRQTFKHGKVGTIAGCYVTSGVLERSARVRVIRGGVVVFPPADKVVGLDSLKRFKDDAKEVREGFECGLKITDFNDIKVDDVIEAFKIESRARTL
>NZ_CP053452.1|WP_171471161.1|3136471_3137692_-|FtsX-like-permease-family-protein
MAHPPPVPLAWRNLAHDKVRFALFASGIGFAVVLMGVQYGIMNAMLDSNTVLIRRLKCELVLVNPNKSALMFPEGVSRRRIEQALGVPGVASVAPVYLEYSAAQMRHTASDPARRTNTRRVRVIGVDPAADVLDLPGVTAAEWQALQTPGTALYDRKSRPHPDGTNHPGESVFGTLAAGTRTELAGREIVLVGGFEMGFDFSTDGSLVVSDRTFERWVREPYYPTSPTAEADLGCVKLAPGADPDDVRAALRAKFAAEGDVLVLTRDELVSREKRFWWTNTPIGFAFGAGVVLGFIVGMVICYQILASDVADHLPEYATLKAIGYTNRYLSWVVLQESLILAAGGFVPGMAVTYGTYLLLTHVTGLPLTLTPGRFALVLGLTVVMCAASGMMAVGKVKQVDPADVF
>NZ_CP053452.1|WP_171471162.1|3139461_3141432_+|HAMP-domain-containing-histidine-kinase
MPGPDALADGLRALDPPFFDPAGDRLAGSGEFVVVLRPTPRVEGVLTYPDAVLDAYTRGAGAWTHQHARPIVQTVRPSERRGRRMSSTLTPVLPAAPPPQVWRYAGRLAPLAVLWAVLVGLLAWLLHTRANWGEESDRADVREWLDNTRVFRKTLTELVRDYIDLLHAENRGLDHADRVKNKRAEIEETLRALVEPTRLYSGQLPLFPNVYALEIELAGVADPDDRSAPVFGWASPKPRPGGSAQAQLRTLEYEPALHRPGAAATVRCVYQLHSFNRMQKQQDEYRRWQSVGAVVLVPTTLFAVVLVVRFLRRERASELEAWRAAAESEHRERELLTAQVERELIERTLLESRVKHQEAERGKEELGRKLLEQELEAAKLEARAAEAEHSALEMKSQLYASIGIMAGSYAHNIKNLLVRPNDLIARCMEAAGPGGEQHGMLEEVKATLGTVTERLQQILRTVRRDPANAEVTQVDANALFRDTQRTWAEMAHDKWKLALTADAPPGPALVIGDLSHLQQAVENLVFNARDATFEMRNHLRDEAKRETDPAARRQKLLSAAAWRGEVHLAARRDGAHVVLEVRDNGIGMTDEVRRNCLKTHFSTKRDNALYEGYSAGMGLGLSFVAMVLEHHKAALEIDSAPLRGTTFRIRFPLASE
>NZ_CP053452.1|WP_171471163.1|3141563_3142388_-|uracil-DNA-glycosylase
MGKKKKPAETASLFDEEQAAVAPAADKTEPAALPPEELPPLPAGVPGLPPDLDPSWLAALNPETRKPYWADLAKFVSEERKNFTVFPPAADVFNAFRYAPLDKLKVLLLGQDPYHGPGQAHGLCFSVRPGVALPPSLRNIYRELDTDLGIPPVKHGYLVSWAKQGVLMLNACLTVRRGAANSHAGKGWEKFTDAAIRAVNDQKRTIVFVLWGGYAQKKLPLIDPSRHVVVKSAHPSPFSEHNFFGTKPFSKINAALEAAGETPIDWRLPEKAEE
>NZ_CP053452.1|WP_171471164.1|3142813_3143317_-|hypothetical-protein
MGVQMGLVLSLVSAANLPCRSSSSASSEPQRINYGALFFAYEDFLANVIRTKELTYSSKKKPIKEAFATHFDDALADFCWNHDEVDLARLVRNALAYNGARFGKDLENYKARFVDVSGTSKALLRREHFNPVDGIIQITPDNTAYLFGVLKERVTMIVEALAQSLTL
>NZ_CP053452.1|WP_171476040.1|3143867_3144806_-|replication-initiator-protein-A
MSKRTQPKGDTQPDLFTASFADIPIRDQRDTMERPFFSLSKKPRLAPIEYRVGDVWVEVTANSKFGMASIWDADILIWAATQVTEAIDRGLSPDRTIRFHPYNLLKAVRRPVGGDHYRRLREALDRLTHTAVRTNIRAEGKKKSSSFHWLEGWNEVINEATGDTMAMTLTLPDWLFNGIVTKGGVLTIHEDYFLLTGGIERWLYRVARKHAGTQELGWQFTMRQLHEKSGSAARFSDFALDVRRVVDSDGLPEYALSVHRTEADEIITFTPRCRLDATDPRFRPPRNPRRRVGLGITEPALSLAQMVTADQA
>NZ_CP053452.1|WP_171471165.1|3145516_3147424_+|ATP-binding-protein
MSESTVPQAEMQPPTDFSPEWGGSAPRGGKTVVTRALKDGARVPLFLGQTLIKSLRDLGYNSTTSALCEHVDNSIQWGATEVRVYFRQSGKQPNQKIDILVYDNGKGMAPHVLKVAMAFGGSMVYDNRAGIGRYGMGMKAAALNTAKSVDVISWQEPNAFYSMTLDVEKIGQDRNNMIELPDPQMTDELPSDVASMFTKPMDGAKKSAEAQDLFAEDSDNLHERLGKTGTIVYLPACDRLTYSTAKTLADHAIKDMGRIYRRFIDKGVKLYINNSLVEAFDPTYWLESARHTKVEGITEKKSSLVDSWTVEVPIAEDSRTTTPVRVRIFMLPVQTWAALPRQTLRNGLHVYDTHTVSYVRNSREVDIGAEPRLKINKHHTNSWMRVEIEFNADADEAFGVAANKQGARLQQFAAKAILDHDNKRFAKTVADVRKAIREQHLKVTAEKLAGQTSEAEQHATAADSLQSVVLPAPPTDTADQQAALEANLRGLAAGLRREGETEEQAFERVKASKFLTDLKHQEYAPFYDTEFKYGKLIVRVNTAHPFYREVWQPIADLAKKSIQVSDSEDGEAVGSDVADASRKALLGLELTLFSLARAQTQMMVGNAQEQQLNQMFRTLRKSWSDVLETQFIKAE
>NZ_CP053452.1|WP_171471166.1|3147918_3149175_+|hypothetical-protein
MSITTGPDFDGVPLDTRTIAQDRLNIGNKARSNLFPWNGQFSPQLIEALLTTYASTGAFVLDPFLGSGTVLHEAGRLGHPAFGSEVNPAAFKMALVYRFLNVKVATRRNAIEEADELLQDILPSSPSLFSPQSKRQAAPIQQAITDAVLSAESPLPKILLESLVVLLNFGDKELTAAGVQKAWGGLRDTLLTLPFSEAAIDLANCDARALPLADASADIVITSPPYVNVFNYHQQYRKSVEALGWNLLEVAKSEIGSNRKNRGNRFLTVIQYCIDMTAVLMELRRACKPSARVVMVMGRESNVRKTRFFNGEIMATLAARSAGYCFASRQERVFQNRFGEKIHEDILHLTPHPITGPLTPPSIIAREVMTAARARAPEESIADLTGALEKLDEIQPSPMYSRDAALSARPSRKKKEVV
>NZ_CP053452.1|WP_171471167.1|3149174_3150095_+|Bpu10I-family-restriction-endonuclease
MALPTPHLEKLTATLANEKLPPVDSPRIDAAIVRYKKWIVDLNAVTGTPQQRIQALVALLNDYRRYIDLELVFDSPQDFLYRQKGQLKLDNSVIEEFLPHLVQPAVLPEIAGHEVVVGPTTCFSSVYFSTSLEIPVVGGGLEIRAKDQDFAISKKLFLKASHDAAFGAQHTVTKETHIGFVVSECKTNLDKTMFQEACATAHDVKAAVSGARYYLLCEWLDMTPLSTAPTDIDEIILLRKAKRLNSNVRAKYANFAGRKANRANYLKHLTDNPFRVEVFERFINHIRGILRNEAPVESDVLARGYF
>NZ_CP053452.1|WP_171471168.1|3150096_3151236_-|hypothetical-protein
MGKPTAALAHHPFALDQDIAEGMALWCLKRQSCQFGRIAAKKGQIHFCILHERDLADGDKGLAEKIAKGKRLWKQRALVNMQSPPSGMMLLFASPRVTLAAPDDNLRRFADRLLELAGWAPQRRGKKLDNAISSDFLYLKNPADGFAYGFQFNVDFFAASGDGRWWHDHRIPGGIAFTANSAGHMRHFKDWYESPATDHGQWAVKQAMITVSQAHPTKGEGTEAAPKSPQDEGRVTWLRPLDGRGKPLVNESPCPLNPVPAALQWKDWTRYEGLLHTDHAVRAEFFDGREEAATGAAPYLMDLTYLYDRRQADFINFMAGFRISDDAVYQETGRPETWMTRDGEQTKPHRTDAQVGEMNALLRKCYGWPKLPSLTDDVS
>NZ_CP053452.1|WP_171471169.1|3151287_3152444_+|IS3-family-transposase
MARKTYTREFKLQAVQMLTDQKLSVAEVARKLGVSEGCLRAWKSAAQADGAGAFPGHGNATPGDDELRRLRAEVTRLKAERDLFKKSRGVFREPAELTFAFIAANEDQWPVRWMCDALDVSASGYYAWATRPDSATEQWRRELLSQIRAVHAEVKHRYGSPRMRAALNARGHECSENTVAELMREHGIRAKAPRRFVRTTDSRHQLPVFENVLDRNFEPDGPNRAWGTDITYIPTADGWLYLAVVEDLFSRMIVGWSMDASMESRLVVDALDMAVARRCPGAGLLSHSDRGTQYASAHYQGVLAGHGIVCSMSGVAQCWDNAPVESFFASLKRELVHDEEYTTREQAKGSIFEYLEVFYNRVRLHSSLGFLSPAEFERTYNQKHP

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Crispr_ID: NZ_CP053452_17

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053452_17

3452060-3452162

Orphan

Consensus_repeat	Method
CGGTTGAAGTGGCGCCGCACCCGCGCCCGGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP053452_17

>merge|NZ_CP053452|17|3452060-3452162|CRISPRCasFinder
CGGTTGAAGTGGCGCCGCACCCGCGCCCGGTCGGTGACTCCTCTTCGCCTTCGGCTGTTGCGCCAGCCGCAGCGGTCGAAGTGGCGCCGCACCCGCGCCCGGT

>NZ_CP053452|17|17|3452060-3452162|CRISPRCasFinder
CGGTTGAAGTGGCGCCGCACCCGCGCCCGGT	CGGTGACTCCTCTTCGCCTTCGGCTGTTGCGCCAGCCGCAG
CGGTCGAAGTGGCGCCGCACCCGCGCCCGGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053452.1\|WP_171471412.1\|3461430_3462966_+\|M48-family-metalloprotease	unknown	unknown	gnl\|CDD\|320704
NZ_CP053452.1\|WP_171471409.1\|3454776_3456852_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171471414.1\|3465056_3465641_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171468860.1\|3460649_3461342_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237695
NZ_CP053452.1\|WP_171471403.1\|3447670_3448777_+\|phosphate/phosphite/phosphonate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270291
NZ_CP053452.1\|WP_171471406.1\|3450875_3451232_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235904
NZ_CP053452.1\|WP_171471415.1\|3465774_3467985_+\|thioredoxin-family-protein	unknown	unknown	gnl\|CDD\|226685
NZ_CP053452.1\|WP_171476057.1\|3452314_3453652_-\|DUF1501-domain-containing-protein	unknown	unknown	gnl\|CDD\|369346
NZ_CP053452.1\|WP_171471410.1\|3457165_3459508_+\|DUF11-domain-containing-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171471400.1\|3443201_3443489_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP053452.1\|WP_171471397.1\|3439908_3441015_-\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP053452.1\|WP_171471399.1\|3442626_3443157_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP053452.1\|WP_171471405.1\|3449993_3450461_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378467
NZ_CP053452.1\|WP_171471398.1\|3441967_3442486_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171471401.1\|3443720_3444092_+\|phosphoribosyl-AMP-cyclohydrolase	unknown	unknown	gnl\|CDD\|234598
NZ_CP053452.1\|WP_171471404.1\|3448952_3449921_+\|DUF1559-domain-containing-protein	unknown	unknown	gnl\|CDD\|284919
NZ_CP053452.1\|WP_171471411.1\|3459999_3460590_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274383
NZ_CP053452.1\|WP_171471413.1\|3463132_3464968_+\|redoxin-domain-containing-protein	unknown	unknown	gnl\|CDD\|215497
NZ_CP053452.1\|WP_171471402.1\|3444211_3447328_+\|c-type-cytochrome	unknown	unknown	gnl\|CDD\|274225
NZ_CP053452.1\|WP_171471408.1\|3453759_3454506_-\|DUF4058-family-protein	unknown	unknown	gnl\|CDD\|379094

Protein	Function_ID	Function_description	E-value
NZ_CP053452.1\|WP_171471412.1\|3461430_3462966_+\|M48-family-metalloprotease	gnl\|CDD\|320704	cd07345, M48A_Ste24p-like, Peptidase M48 subfamily A-like, putative CaaX prenyl protease. This family contains peptidase family M48 subfamily A-like CaaX prenyl protease 1, most of which are uncharacterized. Some of these contain tetratricopeptide (TPR) repeats at the C-terminus. Proteins in this family contain the zinc metalloprotease motif (HEXXH), likely exposed on the cytoplasmic side. They are thought to be possibly associated with the endoplasmic reticulum (ER), regardless of whether their genes possess the conventional signal motif (KKXX) in the C-terminal. These proteins putatively remove the C-terminal three residues of farnesylated proteins proteolytically.	1.05861e-63
NZ_CP053452.1\|WP_171471415.1\|3465774_3467985_+\|thioredoxin-family-protein	gnl\|CDD\|226685	COG4232, COG4232, Thiol:disulfide interchange protein [Posttranslational modification, protein turnover, chaperones / Energy production and conversion].	3.63231e-37
NZ_CP053452.1\|WP_171468860.1\|3460649_3461342_+\|hypothetical-protein	gnl\|CDD\|237695	PRK14376, PRK14376, membrane protein insertion efficiency factor YidD.	0.00761013
NZ_CP053452.1\|WP_171471403.1\|3447670_3448777_+\|phosphate/phosphite/phosphonate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270291	cd13573, PBP2_PnhD_3, Substrate binding domain of uncharacterized ABC-type phosphonate-like transporter; contains the type 2 periplasmic binding fold. This subfamily includes putative periplasmic binding component of an ABC transport system similar to alkylphosphonate binding domain PnhD. These domains are found in PnhD-like proteins that are predicted to function as initial receptors in hypophosphite, phosphonate, or phosphate ABC transport in archaea and eubacteria. They belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	2.45753e-60
NZ_CP053452.1\|WP_171471406.1\|3450875_3451232_+\|hypothetical-protein	gnl\|CDD\|235904	PRK06995, flhF, flagellar biosynthesis protein FlhF.	5.02561e-05
NZ_CP053452.1\|WP_171476057.1\|3452314_3453652_-\|DUF1501-domain-containing-protein	gnl\|CDD\|369346	pfam07394, DUF1501, Protein of unknown function (DUF1501). This family contains a number of hypothetical bacterial proteins of unknown function approximately 400 residues long.	5.33441e-78
NZ_CP053452.1\|WP_171471400.1\|3443201_3443489_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	8.12601e-10
NZ_CP053452.1\|WP_171471397.1\|3439908_3441015_-\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	4.0333e-61
NZ_CP053452.1\|WP_171471399.1\|3442626_3443157_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	6.6701e-11
NZ_CP053452.1\|WP_171471405.1\|3449993_3450461_+\|hypothetical-protein	gnl\|CDD\|378467	pfam10670, DUF4198, Domain of unknown function (DUF4198). This family was previously missannotated in Pfam as NikM.	0.0035477
NZ_CP053452.1\|WP_171471413.1\|3463132_3464968_+\|redoxin-domain-containing-protein	gnl\|CDD\|215497	PLN02919, PLN02919, haloacid dehalogenase-like hydrolase family protein.	3.32402e-154
NZ_CP053452.1\|WP_171471401.1\|3443720_3444092_+\|phosphoribosyl-AMP-cyclohydrolase	gnl\|CDD\|234598	PRK00051, hisI, phosphoribosyl-AMP cyclohydrolase; Reviewed.	2.30883e-73
NZ_CP053452.1\|WP_171471404.1\|3448952_3449921_+\|DUF1559-domain-containing-protein	gnl\|CDD\|284919	pfam07596, SBP_bac_10, Protein of unknown function (DUF1559). A large family of paralogous proteins apparently unique to planctomycetes.	4.66534e-50
NZ_CP053452.1\|WP_171471411.1\|3459999_3460590_+\|hypothetical-protein	gnl\|CDD\|274383	TIGR03000, plancto_dom_1, Planctomycetes uncharacterized domain TIGR03000. Domains described by this model are found, so far, only in the Planctomycetes (Pirellula sp. strain 1 and Gemmata obscuriglobus), in up to six proteins per genome, and may be duplicated within a protein. The function is unknown.	3.20651e-05
NZ_CP053452.1\|WP_171471402.1\|3444211_3447328_+\|c-type-cytochrome	gnl\|CDD\|274225	TIGR02604, Piru_Ver_Nterm, putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) (SP\|Q44091) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.	1.40834e-44
NZ_CP053452.1\|WP_171471408.1\|3453759_3454506_-\|DUF4058-family-protein	gnl\|CDD\|379094	pfam13267, DUF4058, Protein of unknown function (DUF4058). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 244 and 264 amino acids in length.	2.11549e-06

>NZ_CP053452.1|WP_171471406.1|3450875_3451232_+|hypothetical-protein
MAIEFVCPACGGTLRVGDETAGRVIRCGGCMTALRVPAADADTGPAVPPNPYDNGRQYPPSDPAPARGRPVPAAANTASLPDAPPARPVAPPRRAPRPGRRPRAGTPVPPPPAPAPRW
>NZ_CP053452.1|WP_171471405.1|3449993_3450461_+|hypothetical-protein
MLRLRSAVRGVARLSLGVVLVLGGCSHSASYTQNESVEGTVTLDGVPVANAVVQFVPDIDPKVQAPSSSGYTDEKGHFKLTCDNTKPGAVVGKHNVVVLPGRSGGGADDEEAKAAPRAKVAPVPNVYSLASTTPLKIEVTVENHSYDLALTKRGQ
>NZ_CP053452.1|WP_171471404.1|3448952_3449921_+|DUF1559-domain-containing-protein
MRSHPRSRSAFTLIELLVVIAIIAILIGLLLPAVQKVREAASRMKCSNNLKQLGLAAFSYEGAMSKFPPGVNLPYTTAVASGQSAGPVFPGQYMSLFEALLPYIEQQNLYNQLNFTTGQYGNALGQTSPAATIVQTYLCPSDTAPKQTTYTNGGKTYYFGANTYGGNPGVVGFYTTSMDQTGIFFINSSVTITGITDGTSNTFMFGERNRLDPTYDRIYGGGTAGAFGQRSGWAWSNNLPGFDYLFGAVQTINWVMPTNLTSDPGYVNEDQRFSVYGSQHTNGANFCFADGSVRYLTNSVPVLILQELSTRANGEVIDASQY
>NZ_CP053452.1|WP_171471403.1|3447670_3448777_+|phosphate/phosphite/phosphonate-ABC-transporter-substrate-binding-protein
MSETVPAWGRSESEQQPQRKSSWAYTLAVVVLLVVGATGYFLYVESQNPPPPPVDELAGLREYLAHLSGHQKLADGYVDTDPQDLVADTPKDPAKWVTVNGALMFSVVATDDPVLAAEQWRPLMAALGAATGKNVKYADDVRTVEDQLAAVRDGRLHVTAFNTGAVPGAVNTAGFVPLFAPADARGRFGYEMEILVRADSPIKTPADLKGKTVGFVALSSNSGAKAPLVALKDEFRLLPGRDYRYAMTGDHVRSVKELVAGRHDAVCVANDLVRRAEAAGEVDKTRYRSIYTSRSFPPLCFGVPHQLAPDLRAKVTAAFAAFKFDPATPVGKRYTVQGKTGFAPVNYEKDWEFVRKIDEALSHLLDAK
>NZ_CP053452.1|WP_171471402.1|3444211_3447328_+|c-type-cytochrome
MYRLALVSLLALPPAASAQPVTHQVKLNGHTFTLPQGFTIEVAAGADLAPRPIVAAFDDQGRLYVCDSSGSNARVTEQVKNKPHRILRLESTKGDGRFDKQTVFVKNVMFPEGAMWLNGSLYVGAPPHIWKFTDTDDDGVADKEEVWFDGKTLTGCANDLHGPYRGPDGWIYWCKGAFAKQEYTVNGKKFATRAAHIFRARPDGTGVEPVMTGGMDNPVDVVFTPGGDIIFDTTFFQHPGGGKRDGLVHAVYGAVYGKDHDPVYEHPWTSPTLMPPMTHMGPAAPAGLHRYESDQFGKEYVNNIFCCQFNLRKVSRHVLVPKGSTYETRDSDFVVSDNIDFHPTDVIEDADGSLLIVDTGGWYKLCCPTSQLVKPDVTGAIYRVKKAGAHKVDDPRGLKVDWVKADLADLADRLDDPRPVVRTRATDAILARGEAGIKTLAGIIFVSHWSDSAYVRAVAALTGVNHPLARQAARQCLGPLVQGDLALAGIHAAGTWRDKEAVDDLVSVLRREGLPREKRAAAAALGRIGDAKAVPALLAALAADSNDRTLDHALTYALIEIGDATQTAQGLKSPAPRVRRACLAALENIPDSGLGTRAVFAELDVNDPALRETAWWIAGRHPQWGDQLAGYFKEKFQHLEKLTPAEQDELVSRAVPFLKANAVRATAGDALAAEASASAQRALLRGLAKSGLKAFPAEWKAGVRRALGSRSDEVVRDAILVLRAAPPNAADFHDLSEGAAKDRARQTLPTPKELVYALAAVGPVGTALPPEPAALVIADLHRDQPGAVRSAAADRLARAALANESLVALTAALKTLHPLELPKLIGVFAKSTDEAVGLALVAALRDPAVRPAVRAEAVKPILDKYPQAVKDGAEKLYAELAAARKGETARLEKLLADMKPGDVRRGQLVFNSAKTNCIACHKVGYVGGSAGPDLTRIGGIRTERDLLESVLFPSASFVRSYEPYRVVTNNDRVLNGVLKKDAPDEIVIVVAADKEERVARSDIESIAPSTVSLMPAGMEQQLTAQDLADLIAFLKACK
>NZ_CP053452.1|WP_171471401.1|3443720_3444092_+|phosphoribosyl-AMP-cyclohydrolase
MLDFEKAGGLVAAVAQDADTGEVLMLAWMNREAFEETVRTGRAVYFSRSRNKLWRKGEESGNVQEVKGVFIDCDADTVLLKVKQIGGAACHEGYKSCFFRRLDDGELKVIAERIFDPKAVYKK
>NZ_CP053452.1|WP_171471400.1|3443201_3443489_-|tetratricopeptide-repeat-protein
MYRRLCYALAMVAWAFSPITAEEPKTVAEFNSRGLVWQEKGEFDKAIKDYDEVIRLDPKSASGFLGRGNAWFQKGEFDKADKDFAEAKRLRELKE
>NZ_CP053452.1|WP_171471399.1|3442626_3443157_+|GNAT-family-N-acetyltransferase
MPEIRIARLAASQPVREALSAILVEAVANGGSVSFMHPLPVAEADAFWDRSLAAAARGERIVLGAFDGDTLVGTVTLILDLPPNQPHRAEVAKMMTRVSHRGRGTAKALLRAAERLALDHGRTLLVLDTATDGSASALYESVGYERAGVIPDYALKPHGGLTGTIFYWKRLGNPPA
>NZ_CP053452.1|WP_171471398.1|3441967_3442486_+|hypothetical-protein
MKVLAWFVAASALLVAGSTHAQDKKSDPKLTVENLEQGFGLKMKSVAYNAPKPPPKTRTLVSGDKPADKTDIVITFEFTKGVTDVRQLLWLHESFAPSAGVPFAFNQLPLIFHFFDEDNVCIEKAVISSIEGDLSGIKGEAFRIILSGPTEVFKRAKRIEARYYLPPPKLDP
>NZ_CP053452.1|WP_171471397.1|3439908_3441015_-|Gfo/Idh/MocA-family-oxidoreductase
MPEPLGFALVGCGMIARFHAKAIQEIPGARVAALVSRTAESASHLLKDTQLPPCPVFHSVEDAVRAPGVGAVIITTPSGAHREPALVAAAAGKHVVVEKPLEITGPRCQAIIDACDRAGVKLCTIFPSRFGDANNALKAAVEAGKFGRLTLGETTCKWWRTQKYYDEGGWKGTQALDGGGALMNQAIHNVDLLLWMMGDATHVSGFTATLAHERIEVEDTAVAVIRFKSGALGVIQATTSVHPGYPKTIAVHGDRGSAVIEQDDVLRWDFEPATPDDAQVKERFAAKVGSTGAGLGGNLREVPPTKTGGAADPKAISHEGHRRQLADFVAAVHENRAPRVDGREGKRAVDVICAIYESARTGRTVELK
>NZ_CP053452.1|WP_171476057.1|3452314_3453652_-|DUF1501-domain-containing-protein
MDVLTLRDRTRRDFLRAGALGFGGLTLPDLLRLRAAQGEPARTPRAVIMICLAGGPSHLETYDMKPDAPAGYRGEFNPIRTNLPGFDVCEHMPLQAKIADKLALVRTVQFVEPMQHELEEVYTGFPKAQHRPSFGAVVSKFRGGDPRLPGYVSLEYGTTTTSYESPQYLGATHRPLQLAGTEGVRTLSLHRDVSPAKLDDRRDLLKAFDTMRRTADARREGADMDAYTARALDIITSPKAREAFDLTKEPVKVRAKYGENRYEKYVYVGTKPDSQWDGHQFLLARRLVEAGVPVVTLRAGLWDHHGNVVSGAGGTIFSGMKTMLPLLDRGIHALVTDLHERGLDKEVLVLVWGEFGRTPKISQNGRDHWPETGFALFAGAVRAGQVVGQTDSRGERPKTRAVTAQNVLGTVYHALGIDWKQKVPDFTGRPIQLLDDGEPIAELVS
>NZ_CP053452.1|WP_171471408.1|3453759_3454506_-|DUF4058-family-protein
MHDWTRVDPNDYHDFHFAWIAAIRQALNTGRLPDGYFAMAEHTTPPYVPDVLTLTLPTPDGAPAVEDEPTNEHGGVATLAPPVTRVASTEHGKKRKPAGRRRVAVRHVRNRRLVAVIEIVSPSNKASKAEFADLRDKSVELLRAGVHVLLIDPFPPTPRDPKGLHDAVWRALTGKRFDPPADKPLTLAAYAAVGGNTFSAFVEPLAVGDRLADMPVFLTPQAHVAAPLEETYQSAWAGFPVPLRPLLG
>NZ_CP053452.1|WP_171471409.1|3454776_3456852_-|hypothetical-protein
MSRRPTWAITFLGFGFGLGAVLLTSTSREAVAQPKAPAIVAAPQAPTINTPASFGAKVGEEVELTFTGGNLTDPTGLLLGCPAKVTIPTDNKNGTEPGKLRVKVTVDPKCPIGLYTVRVATKNGISNARPFVVDALPLAASTAANRTKDAAQAVTVPVSVSGIITAETSEFFKVKVNANQKLTFEVLARRIGSPLDPIVVLHDAKTKRELIDLYADDTPGLQGDCRLTHTFKEPGEILVEVRDTTHRGGGDFAYRLRIGEFPGATTAYPLAAQRGKPVTVGFAGPDAIDPVSVTAPSDSGLAAFYVAPPAGGWPLPVLLTDYPQATEQEPNDEPAKANKLPVPGGVSAKFDKAKDVDHFAITGKKGQKLAISVLTFEVNSPAEVLVRVLDAKGGQVAANNPAAPANRFEFTPAADGEYVIACEHQNFLSGPNEVYHLSVVPVGPDFTVALAFDRGEAAAGGSTGVFATVSRLNGFAGSVELTIDGDSALSGKSALPPNQQIAFVPLAVKDGTKTGGYAFRVKATASIDGATVTRYGTMTDAVKANLAGMTNPPVEMFNQCALGVVEKLPFTIKFTPEPATIEKGKAGKIVVDATRGDGADADIVLAPLYLPPTIVPAIKPIPKGQTKGEIGLTVQPPTPAGATPLLFRVTTKVGGKDYAFIPPPVTIDVVEPKKEEPKKELPKKEQPKKGK
>NZ_CP053452.1|WP_171471410.1|3457165_3459508_+|DUF11-domain-containing-protein
MSARLAALVLSAVALPAAGCTYNPAAFPFIVPPGPIQQTHAKPRGFGYFRDYDPKATRIEVKPNGQANAPLGSQIVLVASVLDKEGRPRRDRRVEWMIEGPGNIIEADESGLYAGRGYKVDNKYAVTYTSYIPKKMTRGNDDPKDDVAIEPGQTFVVISSAIPGETVVTAYAPEVYNWDNGRVVTKVVWGDGRFSFPAPTTVRIGGETTLTTTVTPSATEPQSAFRVRYRVIDGPAAVLVSKSAAGTGTSLAGSGATETEAATDENGAAAVRLVESDPKPGRTRIAVEVLKAPDTGTGPGTVVGRRDVTVEWAKAELKLRVNAPQAASPNGPFPVTVALDNTTGVESKDARVRVTLSDGAVLGSSEPPPIKQDEKGALIFDLPPVSGKGKQAVTLQVQPKKLGSVTIMAEAVTGDGMQANTSAVTRIEQGKLQLHLEAPSVGLAGERIPVRIAVTNGSTTPAENVTVWAAFDAGLTSASGANPVEIAGGTIAPGHTQTFDLPLAAKATGRYGVRASATGDGNLSAKADPIAVDVRRAELAVALNGPKIAYIGQGADWTLTVANRGEATLSNVAARVTVPAELNVTTADGGSISAGLVEWKLGDLRAGEQKSFKFSGETSKFAAQAVVSAAVSGDVVNNGANVGAPVEGKAETALAVIGTPALALELATPPGLVEVGKRVSYQIRVKNQGTVSAQKIDVTAFAPPELKAVRGSGGTADARIDGTGRITFPTVDELQPGQTLTLTVEVDTAQAGDARFKVEVAAAHIKNTLKEEQSTRITGK
>NZ_CP053452.1|WP_171471411.1|3459999_3460590_+|hypothetical-protein
MFRTLAVLGTLVAFTATATAQPGTTRNWPYVPGAPLPAASVPQGSQGTTVYFPVALPTGWGIGWGYQTYNPWTGFSYAFGGIVPTNPTPPETPAPTAESPRRPEAAVVLSNEFPATLALQFPAAAEVWLDGKKVSGDAATERVLKSPVLRPDQTYAFNVKARWTTGDKTYEATRVVKLGSGDRSRLLIVSGDEVRK
>NZ_CP053452.1|WP_171468860.1|3460649_3461342_+|hypothetical-protein
MSRFFVPALTVVAFATFAPTALAQHGGRGGQMGGGSSQRTLPLSPGVFPGSSIGPGTQFLPQQTPRFVPNNGIAGGGTTQYLRPNAGFGAGSSRFGLVNGVGFGFGYGYGGYGYGYGYNGYGYGNGDYGYSYGYAPVYYHRRHWFGGWYQPNIILGNEFPATLTVQLPSGEVPKEYSLTSPVLKPEERYTFAVNVRWTSGGKTYEAKRDVTLGAGDRSRLLIVSGTEVKE
>NZ_CP053452.1|WP_171471412.1|3461430_3462966_+|M48-family-metalloprotease
MPILLVFALVAACLPIDWPVPPFAPERETAAALTGGSVALVLALAFGLRTWVVVTLRRDPDRRIEVAQAYGRCRRLLFFVNIGAVAACVLSFGWGWLVRSQLQVQWNGESQLAPFAEFAVPLPYFVVLVGCWVIYYDAERALYHALHVGRRVFWPRHAYLLHNARQFLLMVLLPVGLVVTQQTLTRFAPETTRTDLYRAASLAVVPAMLLFMPLLLKPLLGLQTMPPGATRAHLEALAQRLNFRCTDFLLWPTHGAAVNALIAGLMPRVRYVVFTDRILEDLPQDELDAVLGHEIGHAKHGHLWFYAAFLALSLSVLAALGLLVDQQLRASDALKRPEYEAWLKENETWLALPPVVLVACYLFVVFGALSRRCERQADVFGCKSVSCGNPTCTGHDAATVFPPGGNALCPTGIRTFARALERVGEVPPPAAPEPWTLRRVVREARVWARHWLHGPVPHRVAFLLSLIERPAAEPRFQRRVFTFKCGLMLILTLALVALGETVGWRDLLDVM
>NZ_CP053452.1|WP_171471413.1|3463132_3464968_+|redoxin-domain-containing-protein
MSEAPLPADAPAAHTSAPPVPPKARFRWPLAIVLALGCGTALVACSAVWDRTRPAAEPGAQAKGTPAPERPGKTEPVAFRQADDKKDEKEKKKTPAPELDGGIAWLNTAGPLSLKKDLKGKVVILDFWTLCCINCIHIMPDLAKLEKKYPNELVVIGVHSAKFENEKVTASIRKAVLRYQIEHPVVNDANHAIWDKYEIEAWPTMVVIDPEGNLVGGISGEGNYELLDVVVGKLVEEHKKKKTLDEKPIRFDLAKYRESGDTPLFFPGKVVADEKGGRLFIADSTHHRIVVTDLQGNRIAVAGTGTPGKTDGAFDKAQFDDPQGLAVRGDTLFVADRKNHLIREIDLKARTVATVAGTGEQDHEADSRRLTTPVPAKEIGLNSPWDVLLDGNALYIAMAGHHQIWRLDLQAKKIEPYAGNGRETLTDGLLRGSSFAQPSALTTDGKDLFVADSETSSLRQLPLTATPEARVKTLVGRDLFAFGDVDGPGQVANDPLGTKREARLQHALGVVHVDGKLYVADTYNSKIKVFDLKTGELATLVSGRPFGPFGPSVLNEPGGISYANGKLYVADTNAHRIRVIDRATLAVTTLTLKGVEPPVVPKDAKAERKPK
>NZ_CP053452.1|WP_171471414.1|3465056_3465641_+|hypothetical-protein
MTRVCVAMFAMAVAALLATVPGTATAQKWYDKAVKKVEGRFTPAEAKPGQTVTFTLTVELNDGYHTYPTTQPDKLAASMTNLIKFPAAGTVVFVGDTLDPKDFATKEEPELGIKDLRYNTGTVVYTRKAVVSPKAAAGAATVKLTTFSLSVCDKTNCFPAKNVPVEAALKVLDGPPVAVEKAYADEVAKALGGK
>NZ_CP053452.1|WP_171471415.1|3465774_3467985_+|thioredoxin-family-protein
MMSRSALVLVAFALCGLSAPVSAQPLGDPFPKDGFAPPAGKLPAKFAKLADVSVSVTPAKVKAGETVTVRLTVAPKAGGYTYPAAPEDAKQTSRNEIELPAPGDLIFIDPVTDPALKWETKPRDADAPNGPKDQYTHQAVTWAFKAVVSPKAKSGAKSIPLDGVRLQVCDAKNCYIVGGEKLPPVEFRVEEGTSDKVNPDDLKRAQAIVNGPPPANAGPGQVEPPPASGSPVKTESRKTAKSTEAYADELKTLGTAIVPADEAGTKQTGLWGFIATAALWGLISLVTPCVFPMIPITVSIFLKQAHGSLRERLKLAGVYSLTIISVLGVSAFALLKFMAVLSTDPVTNILLGVLFLVLALSLFGMFELGLPNVLQKRLQAKQSQGGVVGTIFGALAFTVISFTCVAPFLGGFAGISAGSDGSGGDIVLPTAREIAGGLAFATAFAAPFFVLALVPGLMKALPRSGGWLDNVKVVMGFLELAAALKFLRTAELRLLPATQYFTYDLVLSGWVAISGACGLYLLNVFRLPHDEERPNIGVPRLLFALLFIGLALYLAPALLKGADGKGQRPAGAVYAWVEAFLLPEDAPVLGAKQEDVWRTDLKDALDAARKSGRPVFLDFTGVTCTNCKINERDVFPQSAIREDLQQFEKVKLYTDEVPAALYGTDPGRQVRKAEAKANGEFQNSVFKDIALPMYVVLVPQPDGAVKVLGLTEGKINDTGDFSKFLKDSLEKAKSKK

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Crispr_ID: NZ_CP053452_18

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053452_18

3825750-3825860

Orphan

Consensus_repeat	Method
AGCGGACATCACGCGGAGCGTGATGACTACGGTGCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP053452_18

>merge|NZ_CP053452|18|3825750-3825860|CRISPRCasFinder
AGCGGACATCACGCGGAGCGTGATGACTACGGTGCGGAGTATCGCTCCCGTGCGGTCCCACAACCGCGCCCCGATAGCGGACATCACGCGGAGCGTGATGACTACGATGCG

>NZ_CP053452|18|18|3825750-3825860|CRISPRCasFinder
AGCGGACATCACGCGGAGCGTGATGACTACGGTGCG	GAGTATCGCTCCCGTGCGGTCCCACAACCGCGCCCCGAT
AGCGGACATCACGCGGAGCGTGATGACTACGATGCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053452.1\|WP_171471651.1\|3818036_3818516_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP053452.1\|WP_171471665.1\|3832476_3832734_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171471661.1\|3827638_3828127_+\|dual-specificity-protein-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|350354
NZ_CP053452.1\|WP_171471658.1\|3824448_3824919_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171471660.1\|3825969_3827433_+\|IS66-family-transposase	unknown	unknown	gnl\|CDD\|376980
NZ_CP053452.1\|WP_171471669.1\|3837632_3838301_-\|DUF4198-domain-containing-protein	unknown	unknown	gnl\|CDD\|378467
NZ_CP053452.1\|WP_171471657.1\|3823590_3824274_+\|PepSY-associated-TM-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|374499
NZ_CP053452.1\|WP_171471667.1\|3833778_3834984_-\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|369777
NZ_CP053452.1\|WP_171471662.1\|3828232_3829981_+\|alkaline-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|293740
NZ_CP053452.1\|WP_171471664.1\|3830901_3832353_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236090
NZ_CP053452.1\|WP_171471654.1\|3819802_3820414_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171471668.1\|3835394_3836981_+\|DUF4139-domain-containing-protein	unknown	unknown	gnl\|CDD\|379285
NZ_CP053452.1\|WP_171471659.1\|3825078_3825636_+\|peptide-chain-release-factor-like-protein	unknown	unknown	gnl\|CDD\|376337
NZ_CP053452.1\|WP_171471650.1\|3817682_3818033_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171471655.1\|3820462_3821512_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|290220
NZ_CP053452.1\|WP_171471652.1\|3818619_3819132_+\|adenine-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|235028
NZ_CP053452.1\|WP_171471656.1\|3821887_3823456_+\|DUF2271-domain-containing-protein	unknown	unknown	gnl\|CDD\|224394
NZ_CP053452.1\|WP_171471666.1\|3833082_3833619_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171471663.1\|3830337_3830622_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171471653.1\|3819160_3819697_+\|DUF1542-domain-containing-protein	unknown	unknown	gnl\|CDD\|336743

Protein	Function_ID	Function_description	E-value
NZ_CP053452.1\|WP_171471651.1\|3818036_3818516_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.14751e-08
NZ_CP053452.1\|WP_171471661.1\|3827638_3828127_+\|dual-specificity-protein-phosphatase-family-protein	gnl\|CDD\|350354	cd14504, DUSP23, dual specificity phosphatase 23. Dual specificity phosphatase 23 (DUSP23), also known as VH1-like phosphatase Z (VHZ) or low molecular mass dual specificity phosphatase 3 (LDP-3), functions as a protein-serine/threonine phosphatase (EC 3.1.3.16) and a protein-tyrosine-phosphatase (EC 3.1.3.48). It deactivates its MAPK substrates by dephosphorylating the threonine and tyrosine residues in the conserved Thr-Xaa-Tyr motif residing in their activation sites. DUSP23 is an atypical DUSP; it contains the catalytic dual specificity phosphatase domain but lacks the N-terminal Cdc25/rhodanese-like domain that is present in typical DUSPs or MKPs. It is able to enhance activation of JNK and p38 MAPK, and has been shown to dephosphorylate p44-ERK1 (MAPK3) in vitro. It has been associated with cell growth and human primary cancers. It has also been identified as a cell-cell adhesion regulatory protein; it promotes the dephosphorylation of beta-catenin at Tyr 142 and enhances the interaction between alpha- and beta-catenin.	1.92044e-52
NZ_CP053452.1\|WP_171471660.1\|3825969_3827433_+\|IS66-family-transposase	gnl\|CDD\|376980	pfam03050, DDE_Tnp_IS66, Transposase IS66 family. Transposase proteins are necessary for efficient DNA transposition. This family includes IS66 from Agrobacterium tumefaciens.	1.1288e-39
NZ_CP053452.1\|WP_171471653.1\|3819160_3819697_+\|DUF1542-domain-containing-protein	gnl\|CDD\|336743	pfam07564, DUF1542, Domain of Unknown Function (DUF1542). This domain is found in several cell surface proteins. Some are involved in antibiotic resistance and/or cellular adhesion.	0.00196945
NZ_CP053452.1\|WP_171471657.1\|3823590_3824274_+\|PepSY-associated-TM-helix-domain-containing-protein	gnl\|CDD\|374499	pfam16357, PepSY_TM_like_2, Putative PepSY_TM-like. This is a family of bacterial proteins with three PepSY-like TM regions.	2.27462e-24
NZ_CP053452.1\|WP_171471667.1\|3833778_3834984_-\|methyltransferase-domain-containing-protein	gnl\|CDD\|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	1.60557e-11
NZ_CP053452.1\|WP_171471664.1\|3830901_3832353_+\|hypothetical-protein	gnl\|CDD\|236090	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated.	0.000499243
NZ_CP053452.1\|WP_171471668.1\|3835394_3836981_+\|DUF4139-domain-containing-protein	gnl\|CDD\|379285	pfam13598, DUF4139, Domain of unknown function (DUF4139). This family is usually found at the C-terminus of proteins.	5.27422e-09
NZ_CP053452.1\|WP_171471662.1\|3828232_3829981_+\|alkaline-phosphatase-family-protein	gnl\|CDD\|293740	cd16016, AP-SPAP, SPAP is a subclass of alkaline phosphatase (AP). Alkaline phosphatases are non-specific phosphomonoesterases that catalyze the hydrolysis reaction via a phosphoseryl intermediate to produce inorganic phosphate and the corresponding alcohol, optimally at high pH. Alkaline phosphatase exists as a dimer, each monomer binding 2 zinc atoms and one magnesium atom, which are essential for enzymatic activity. Although SPAP is a subclass of alkaline phosphatase, SPAP has many differences from other APs: 1) the catalytic residue is a threonine instead of serine, 2) there is no binding pocket for the third metal ion, and 3) the arginine residue forming bidentate hydrogen bonding is deleted in SPAP. A lysine and an asparagine residue, recruited together for the first time into the active site, bind the substrate phosphoryl group in a manner not observed before in any other AP.	5.77685e-81
NZ_CP053452.1\|WP_171471655.1\|3820462_3821512_-\|hypothetical-protein	gnl\|CDD\|290220	pfam13485, Peptidase_MA_2, Peptidase MA superfamily.	0.00129586
NZ_CP053452.1\|WP_171471652.1\|3818619_3819132_+\|adenine-phosphoribosyltransferase	gnl\|CDD\|235028	PRK02304, PRK02304, adenine phosphoribosyltransferase; Provisional.	6.33636e-93
NZ_CP053452.1\|WP_171471656.1\|3821887_3823456_+\|DUF2271-domain-containing-protein	gnl\|CDD\|224394	COG1477, ApbE, Membrane-associated lipoprotein involved in thiamine biosynthesis [Coenzyme metabolism].	2.26033e-76
NZ_CP053452.1\|WP_171471669.1\|3837632_3838301_-\|DUF4198-domain-containing-protein	gnl\|CDD\|378467	pfam10670, DUF4198, Domain of unknown function (DUF4198). This family was previously missannotated in Pfam as NikM.	1.45092e-08
NZ_CP053452.1\|WP_171471659.1\|3825078_3825636_+\|peptide-chain-release-factor-like-protein	gnl\|CDD\|376337	pfam00472, RF-1, RF-1 domain. This domain is found in peptide chain release factors such as RF-1 and RF-2, and a number of smaller proteins of unknown function. This domain contains the peptidyl-tRNA hydrolase activity. The domain contains a highly conserved motif GGQ, where the glutamine is thought to coordinate the water that mediates the hydrolysis.	2.45669e-26

>NZ_CP053452.1|WP_171471659.1|3825078_3825636_+|peptide-chain-release-factor-like-protein
MAHSPPSAQGLPRATWSRLTEDQLLAQCDVDTYRASGPGGQKRNKTSSAVRLRHEPTGLIVIAEESRSQHENKAKALKRLWHALFLELRDPLPVGITPEVVAELPDYAAARDRSGRLHMSAKDPRFWPAVGVVLDVLAAVEARVADAATLLGVSTGNLIDFLQTEPKVWQEANRLRTVCGHKALR
>NZ_CP053452.1|WP_171471658.1|3824448_3824919_-|hypothetical-protein
MGLDLSVGTLAWCLANGEAEGADWTRRDMREINRLLAANGLSAHVEPETLPNLRDRCRLHGMPYSWIHYLRRAIAFARQSPADFRPLNEDQDPNDARVDREIDLFQSHLICHSDSDGYYVPIDFWNPLFDDTDVLVGAFWALVRRGCVNSLKWLCY
>NZ_CP053452.1|WP_171471657.1|3823590_3824274_+|PepSY-associated-TM-helix-domain-containing-protein
MSRFHRWLLKTARTVHVYVTLFGLTLILFFAVTGFMLNHTEWFLPDDARLEAQTRRDARPLPLDRLPGGKLPVPSEASGEATGDEKLAVVEALRKEFDIRGELSSFGFVRDDNDRQQIKVEFKRAGGETVATIDTETAKTEVAATYQGWAIVMTDLHRGNRGNLSNEVKRTGRVWSFVIDGTCVLLLVVCATGLVMWWSLKSRGKWGAVLFLLGTAGAVGAYYWFVP
>NZ_CP053452.1|WP_171471656.1|3821887_3823456_+|DUF2271-domain-containing-protein
MFAPAPRSVLVLLLVALAAGFLLARPGSTRPPDPPAPRADEFSFHRDHVIGTSLDLCIVAPDEGTAEDAELTVLNEIERLRTIFSTYDATTEISKLNRTREPVRVSAEMAEVLKAYELWQRKSDGAFNGQVGELVRAWRDGEKADREPAALTLDRIVADLKKPGWRRDAGTNTVTRLTDQPLNLNAIGKGFIIQNAFDAVREQHPTVSGLLINLGGDIRAWGAPPGGTGWAVGIQNPFRHFDNAPPLAGLRLTNRAVATSGGYERFYTINGKRYSHVFDPRTGRPAEGVASATVVAADNVTANALATTLCVLKPEDGLKLVASVPGAECLIIAADGKPFPSAGLRRFEVTAAPVPARQDKEDEKAEEPKAGAWPEGYQVTVAVELPKIEAKRYRRPYTAIWIENDKGKAVRTLAVWGNAPKYLKDLGDWWKIGKGDADLVKAVTRATRGPGKYDLVWDGKDDKGAALPQGTYTVRVEVHREFGAHLRQSGKIECKDKPATVKLEKNAETAETVIEFKKPEKK
>NZ_CP053452.1|WP_171471655.1|3820462_3821512_-|hypothetical-protein
MTLRRQLGALVAVLIAPAFASAATYDTANFRTEAPTDKLAKEFGELAEKYRTDKAVDWLGHPMPQWPRRCPLKVQISQGSAGGATTFTFGQDGNGKSIVTSISMEIRGEASQLKFSVLPHEVTHTVLAHHFGRPVPRWADEGGSVLSENDEERFNHDVRCRELLNAGRGITLRALFKMTEYPRDMIVLYAEGYSVCHFLVRKGGDSQEGRGKLLQFLAAGMQGNTQDSWNAAANKVYGFESVDAMEAAWLTALKTPPVRVAREAAPQAGLASSSGRNEIRTSAPPVVPVLEPPVRAARGATPDSEPSRPAYLPPTDPGSLGSTPVTRPIAPDRPPPVLLPPEIPKPVRQ
>NZ_CP053452.1|WP_171471654.1|3819802_3820414_+|hypothetical-protein
MATAECPACDRAVEVEDAYREWTVRCPHCDAEFVPNDVARAAAARRRREEEKYEDEMYGVPSAVRKEALQLVAGPALWLEICGWMSVLIATGIGALCIGLAVEIANNPQVNANDEPAALFAFLGCFSVVLGVPYGVAMAIGARKMRALSSRGWAMAAAILGVASFSMFGCWGLVPTGIGIWALVVLNKPAVSETLGPIRRNRT
>NZ_CP053452.1|WP_171471653.1|3819160_3819697_+|DUF1542-domain-containing-protein
MSGYPDDRDDELDRRDDELDIRTAKSAVIVPAIGLIVVAAFGLLSIVSGIIQFPGLDAAFDEQIDQVEANPQFTAEQKKQQVQMWNQLRDVTKAAWFPLYGIIGLVSILIFVGGFKLMNLSSPGLVYLSAILSFVPCVSGCCFLGLVFGIWALVVMGKPEVKAGFAARRRAAYSSDAN
>NZ_CP053452.1|WP_171471652.1|3818619_3819132_+|adenine-phosphoribosyltransferase
MDLKARVRDVPDFPKPGILFKDIMPLLADPPAFAFAVDALCARYTAADIDVIAAAEARGFLFAAPMAIQMKKPLIPLRKPGKLPGATRSFKYDLEYGSAELHVHADAIRAGSRVLVVDDVLATGGTMAAACQLVEHAGGAVIGCAFLIELAFLNGRAPLAGRDIFSLLTY
>NZ_CP053452.1|WP_171471651.1|3818036_3818516_-|GNAT-family-N-acetyltransferase
MTLSVRRATPADEATLVMFNKAIAWETEHKRLDPAVLAAGVRAVLADPARGFYTVAERGGEVVGQMMITFEWSDWRNGWFWWVQSVYVHEDARRGGVFRALYRAIEQQAAADPSVIGLRLYFETDNARARATYRALGMTDTTYGLMERYPLPGRESHVS
>NZ_CP053452.1|WP_171471650.1|3817682_3818033_-|hypothetical-protein
MTPLFPNTWFAAGVITDESAADFARYAAAAPHRPARHWMWAAFRDWCEERERLTAAECRAIYTLGEGDPDANLGTAMMCRALYERTCPGDLREAAKGSDRVPVRRAAVKFTHSRSG
>NZ_CP053452.1|WP_171471660.1|3825969_3827433_+|IS66-family-transposase
MTPIPQPPELPSDLPPQVVAYIRILEATIAELTAQVTGLTTRVAELEARLNQNSTNSSKPPSSDAPHTKPAPPKPSSGKRRGGQPGHPKAERTLLPPDEIRTLKPATCRGCAHPLTGDDSNPAVHQVHEVPVVTPHVTEYRCHRLRCPHCGTTTVAAVPAEAATGYGPRAQAVAALLTGSCRLGKRGTSQLFADLFGLPLSPAMVCKLQHRTAEALKPVAEEALMYTCGQPANVDETSWKQGQKRAWLWVAVTTLVVAFLIRKTRGRSAFEDLRDGSTAVHTTDRYPVYTHLDKHKRQLCWAHLRRDFQAMIDRGGSGTAIGAALLACSDALFENWYRVRDGTLTRSTFRSVYIPALRRQVGEFLRTGAACGCAKTAATCGELLPVEASLWTFARVVGVEPTNNAAEREVRHAVCWRKTSFGTDSERGSRFVERILTVIASCRRQKRNVLAFLIDAVTAHRTGAKAPTLVPAQAQQQNVVNPLFANC
>NZ_CP053452.1|WP_171471661.1|3827638_3828127_+|dual-specificity-protein-phosphatase-family-protein
MPPPGFSWVDRPRLAALARPRSDDDLRWLRRNGVDVLVSLTEDALPRHWVNDAGLLGVVVPVPDMEAPTDRQLDHILATVRKANSSGMGVAVHCAAGLGRTGTVLAAYFVAAGLSAREALVKVRNLRPGSVETAEQERAIERYARRMAGADADPPAGADDPA
>NZ_CP053452.1|WP_171471662.1|3828232_3829981_+|alkaline-phosphatase-family-protein
MRPAIVLAPLAVLAAAVTGVAVFALTRPVTPPPERKVRLAVLVVFDQMRGDFLERWQPLFGPDGFVRLQRDGAWFTNCHYPYGVTTTGPGHASMLTGACGDRHGIVNNDWREKGESVYCAASPRYKLVPSPPYPGDKKGAERAGGTPDALLSETVADVLKEATRGRAKVFGLSLKDRSAVLPTGRRPDGAYWFYGVFGTSTYYAGGVRPWVAEFNRAKLADRWFGTEWAKFRSEVDYAAWSGADKILGEGKGVAQGVTFPHPMKGVDEKKGGDEKKPSEQGIGPKYYEALANSPFGNDLLLEFAKTCIYAEKLGQHYDPDLLVVSFSSNDLIGHTWGPDSQEVLDVTLRADAIMADLLTFLDKRVGRDQYLLAVCADHGVCPLPEVSRARGITEAQRVDPQELHKALDAHLTALFPATQPTAGKTAGWVEGMGFPWVYLNPRVVRLSGQSREAIAAEAAKFLATRPGVFRTLTRSELSGPVPESDEIATREKRSFHPARSGDVCVILQPYCLPSAAIGTGTTHGSPFDYDTHVPLLVYGPGISGGPRDEPTTPQALAGIFAKWLEVRRPKDAAFPVPETLQQ
>NZ_CP053452.1|WP_171471663.1|3830337_3830622_-|hypothetical-protein
MTLRRTLLGVAGVVAVCGAALAGPPSGPLSEGREVDPVVRDFQLNEPPAAVRREPAPVDQKGDLFRGSLLAALYEAIMHGITIPLGSGRVDDMH
>NZ_CP053452.1|WP_171471664.1|3830901_3832353_+|hypothetical-protein
MRRKLVLGAGLVAFVGGSAAAQFAVDRPQTAAPLPGGVQPAAAPPAPVLGGYQPLTPPSAPTSPSAPMYSSPTAPRGGAYVPPVDGLRPATYGSQTSLYGSPAPAPGVVPAAASLPVHIEIPTVLGKDHPWLIKPEHGPYFIMVKSYVRPAKDSRAAKEALERGEKGLSARELAEGLAAEIRDTYKVQAFLYEYISEERKAEERALIIARQKARTEYVGQLDAIKQKAQIQGMDFLDPDNKLRVRKHDQFDQIGVLVGGFQTDTDASKALVQLKKWPTPKNEVLLDKGLVLNTTGTKPSAESGSINPYPGAFVVPNPVIARATQPTGQAAAVDPFLKKLNDAHPYNLFKATKGWTLAVKSFTAPVEIVNKSDSGQMRKMAAGKGAEALLAGELQAEEMAKAIRAMKGPGGQSLNLEAFVLHTRTASLVTIGQFDSPDDPALLATKRLLSGLSAHVSEDQAGARKSVNAPTLFDNMIPMPVPKS
>NZ_CP053452.1|WP_171471665.1|3832476_3832734_+|hypothetical-protein
MVRLRRAAVLCGGDGAQEVRGEADAVRGGAGAPGGHVADELRRWAKHRASSPAPRAAAHACRTPASAHTTPDSTRACQPGQCRRA
>NZ_CP053452.1|WP_171471666.1|3833082_3833619_+|hypothetical-protein
MPSRLSSRNPITPTSGVTSARATAPSTSSRKPSGTVTSGFSSSTHGPAVSRHPRLTAAANQVVVEPPHGHAAEPGHAGREPVRRRGVIDHPHLGRSGADGRRPPELPHEAGGVLPLTVVDDNDGQLGGRRCDRSVRREAAVVTGCGHGRVRRGAVWRVSQGHEGSFPVPAAGPPAVAR
>NZ_CP053452.1|WP_171471667.1|3833778_3834984_-|methyltransferase-domain-containing-protein
MLPSPLDRWHDPALLDHLAQVRKPWDALTQRIARAVLAAYLPAPTGQLVEVGAGGGQLLDWLPPALAAHATHTEPSEPLLNAFRQRHPGAHAVRAEATALPVPTGSAGAVLGLCVFDTIPDLASVRDEVGRVLRPGGVVVHFLDLATSPDCLFPELIAGGELPLTNFARDPALVAVLTDEQKALLAPANEFDEVLAVGWEPFRRFVEVLEQAKHPLVAALGPYSGLHRPGRLDPERLARGFMAASADPTRLLALNRALLSLTLSARQMGREWPLRAVSSRAHIRERLRAAFGPAHGFATEFAGPVAAREIVPAGDTLPAGTRFVLRHAGRTVTRSEFPESEFGRVVSELDHSPVPPRAPGAGQIVHETTVEVFVARRNGCGNFSGRQPLSGTRDGCDRVAG
>NZ_CP053452.1|WP_171471668.1|3835394_3836981_+|DUF4139-domain-containing-protein
MRTIRVLAAGLALALLGSPAPADDTPVKSKIVGVDLFKNGLAIVKREATLGRAGTYTIDDVPTPVHGTFYIDSTGTVDVAVRMRDVEVPATETVPGNLQDDLAGKKVVVHFRGDKRAPVAGTMMKIKPPRADEQAAAGRFLVLQTAKGRVYLEPSEVMAVESEDAGTTVTRRRPQLALTLAETDKAETKVTIRYIATGLSWAPSYRLDISDPKTLALEQNAVVRNELADLDGAEVRLISGYPSVQYAHVRSLISPRATFASFFAELAGGRSWEADAASNSIVSQQAVSLNLRAPGGGWGGSNLALGATPAGEGVDLHYQSIGKRTLAAGDALALTVARGKAEYERIVEWLVPDTRNAHGQPEGNGEGDVWDALKFKNPLAFPMTTGPATVTANGQFNGQRTSYWVNSGEETVLHVEKALSVRTRATETEQLNKDGSGRDLIWLGGRQYRKTTVEGELAVSNHRKETIALVIRRRFSGELVQADGDPKRQLREEGVYSVNKRQEMLWTLPLKGGEEKKLKYTYTVLMPH
>NZ_CP053452.1|WP_171471669.1|3837632_3838301_-|DUF4198-domain-containing-protein
MYRTFGALVIGLFAAAAAQAHYPFVVPDDKGESAKVVFSDTLEPDANVNIEKIASTKLTLRDATGKEAPLEWKKGDGFLAVNVPGRGDRVVYGTTDYGVIQKGDDKPFRLAYYPKATIGAASAKAVGAKLPLEIVAVPALSKVRFQVLAAGKPVADSEVTVLLPAGGKKGVKTDKDGYTPTFEGAGRYGVQAKVIDPKEGEHAGKKFSETRSYATLVCDVSK

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Crispr_ID: NZ_CP053452_20

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053452_20

3913866-3914024

Orphan

Consensus_repeat	Method
ACGGTGACGGTCTTCTGCACCGGCACC	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP053452_20

>merge|NZ_CP053452|20|3913866-3914024|CRISPRCasFinder
ACGGTGACGGTCTTCTGCACCGGCACCTTCTGCATCACGGTGACGGTCTTCTGCACCGGCACCCGCTCGGTGACGGTGACGGTCTTCTGCACCGGCACCCGCTCGGTGACGCACTTGTTCTCGGTGACGGTCTCGGTGACCATCTTGTTCACGGTCACC

>NZ_CP053452|20|20|3913866-3914024|CRISPRCasFinder
ACGGTGACGGTCTTCTGCACCGGCACC	TTCTGCATCACGGTGACGGTCTTCTGCACCGGCACCCGCTCGGTG
ACGGTGACGGTCTTCTGCACCGGCACC	CGCTCGGTGACGCACTTGTTCTCGGTGACGGTC
TCGGTGACCATCTTGTTCACGGTCACC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053452.1\|WP_171471716.1\|3904052_3904964_+\|sterol-desaturase-family-protein	unknown	unknown	gnl\|CDD\|225546
NZ_CP053452.1\|WP_171471732.1\|3927698_3928760_+\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|379157
NZ_CP053452.1\|WP_171476069.1\|3927382_3927628_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171471724.1\|3914856_3916725_+\|L-lactate-permease	unknown	unknown	gnl\|CDD\|224535
NZ_CP053452.1\|WP_171476068.1\|3905419_3907033_-\|chromosomal-replication-initiator-protein-DnaA	unknown	unknown	gnl\|CDD\|234667
NZ_CP053452.1\|WP_171471718.1\|3905170_3905410_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171471720.1\|3908430_3909285_+\|FAD-dependent-thymidylate-synthase	unknown	unknown	gnl\|CDD\|234847
NZ_CP053452.1\|WP_171471727.1\|3918806_3919985_+\|ribosome-small-subunit-dependent-GTPase-A	unknown	unknown	gnl\|CDD\|206747
NZ_CP053452.1\|WP_171471729.1\|3923518_3923959_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|275124
NZ_CP053452.1\|WP_171471714.1\|3903113_3903542_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171471721.1\|3909416_3910706_+\|SGNH/GDSL-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|238872
NZ_CP053452.1\|WP_171471730.1\|3923940_3925467_-\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP053452.1\|WP_171471726.1\|3917468_3918497_-\|PmoA-family-protein	unknown	unknown	gnl\|CDD\|379468
NZ_CP053452.1\|WP_171471725.1\|3916773_3917469_-\|dual-specificity-protein-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|350376
NZ_CP053452.1\|WP_171471717.1\|3904926_3905157_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171471719.1\|3907407_3908295_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379228
NZ_CP053452.1\|WP_171471731.1\|3925699_3926806_+\|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit	unknown	unknown	gnl\|CDD\|237139
NZ_CP053452.1\|WP_171471728.1\|3920185_3922981_+\|WD40-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|238121
NZ_CP053452.1\|WP_171471722.1\|3910879_3912682_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|239264
NZ_CP053452.1\|WP_171471715.1\|3903631_3904033_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237057

Protein	Function_ID	Function_description	E-value
NZ_CP053452.1\|WP_171471716.1\|3904052_3904964_+\|sterol-desaturase-family-protein	gnl\|CDD\|225546	COG3000, ERG3, Sterol desaturase [Lipid metabolism].	2.30707e-35
NZ_CP053452.1\|WP_171471731.1\|3925699_3926806_+\|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit	gnl\|CDD\|237139	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit.	0
NZ_CP053452.1\|WP_171471724.1\|3914856_3916725_+\|L-lactate-permease	gnl\|CDD\|224535	COG1620, LldP, L-lactate permease [Energy production and conversion].	5.71849e-133
NZ_CP053452.1\|WP_171476068.1\|3905419_3907033_-\|chromosomal-replication-initiator-protein-DnaA	gnl\|CDD\|234667	PRK00149, dnaA, chromosomal replication initiator protein DnaA.	7.60646e-106
NZ_CP053452.1\|WP_171471732.1\|3927698_3928760_+\|HNH-endonuclease	gnl\|CDD\|379157	pfam13391, HNH_2, HNH endonuclease.	1.02399e-06
NZ_CP053452.1\|WP_171471720.1\|3908430_3909285_+\|FAD-dependent-thymidylate-synthase	gnl\|CDD\|234847	PRK00847, thyX, FAD-dependent thymidylate synthase; Reviewed.	1.30833e-61
NZ_CP053452.1\|WP_171471729.1\|3923518_3923959_+\|hypothetical-protein	gnl\|CDD\|275124	TIGR04320, hypothetical_protein, SEC10/PgrA surface exclusion domain. This model describes a conserved domain found in surface proteins of a number of Firmutes. Many members have LPXTG C-terminal anchoring motifs and a substantial number have the KxYKxGKxW putative sorting signal at the N-terminus. The tetracycline resistance plasmid pCF10 in Enterococcus faecalis promotes conjugal plasmid transfer in response to sex pheromones, but PgrA/Sec10 encoded by that plasmid, a member of this family, specifically inhibits the ability of cells to receive homologous plasmids. The phenomenon is called surface exclusion.	0.00870476
NZ_CP053452.1\|WP_171471721.1\|3909416_3910706_+\|SGNH/GDSL-hydrolase-family-protein	gnl\|CDD\|238872	cd01834, SGNH_hydrolase_like_2, SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.	1.0848e-36
NZ_CP053452.1\|WP_171471730.1\|3923940_3925467_-\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	1.44733e-28
NZ_CP053452.1\|WP_171471727.1\|3918806_3919985_+\|ribosome-small-subunit-dependent-GTPase-A	gnl\|CDD\|206747	cd01854, YjeQ_EngC, Ribosomal interacting GTPase YjeQ/EngC, a circularly permuted subfamily of the Ras GTPases. YjeQ (YloQ in Bacillus subtilis) is a ribosomal small subunit-dependent GTPase; hence also known as RsgA. YjeQ is a late-stage ribosomal biogenesis factor involved in the 30S subunit maturation, and it represents a protein family whose members are broadly conserved in bacteria and have been shown to be essential to the growth of E. coli and B. subtilis. Proteins of the YjeQ family contain all sequence motifs typical of the vast class of P-loop-containing GTPases, but show a circular permutation, with a G4-G1-G3 pattern of motifs as opposed to the regular G1-G3-G4 pattern seen in most GTPases. All YjeQ family proteins display a unique domain architecture, which includes an N-terminal OB-fold RNA-binding domain, the central permuted GTPase domain, and a zinc knuckle-like C-terminal cysteine domain.	3.41309e-110
NZ_CP053452.1\|WP_171471725.1\|3916773_3917469_-\|dual-specificity-protein-phosphatase-family-protein	gnl\|CDD\|350376	cd14527, DSP_bac, unknown subfamily of bacterial and plant dual specificity protein phosphatases. This subfamily is composed of uncharacterized bacterial and plant dual-specificity protein phosphatases. DUSPs function as a protein-serine/threonine phosphatases (EC 3.1.3.16) and a protein-tyrosine-phosphatases (EC 3.1.3.48).	1.76867e-31
NZ_CP053452.1\|WP_171471719.1\|3907407_3908295_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379228	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	3.85351e-09
NZ_CP053452.1\|WP_171471715.1\|3903631_3904033_+\|hypothetical-protein	gnl\|CDD\|237057	PRK12323, PRK12323, DNA polymerase III subunit gamma/tau.	0.0019216
NZ_CP053452.1\|WP_171471728.1\|3920185_3922981_+\|WD40-repeat-domain-containing-protein	gnl\|CDD\|238121	cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment.	5.04382e-43
NZ_CP053452.1\|WP_171471722.1\|3910879_3912682_+\|hypothetical-protein	gnl\|CDD\|239264	cd02966, TlpA_like_family, TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.	6.23266e-09
NZ_CP053452.1\|WP_171471726.1\|3917468_3918497_-\|PmoA-family-protein	gnl\|CDD\|379468	pfam14100, PmoA, Methane oxygenase PmoA. This family is a putative methane oxygenase.	1.89712e-57

>NZ_CP053452.1|WP_171471722.1|3910879_3912682_+|hypothetical-protein
MRPLSRLLLLAGCAWFAAHAAGAQEPKAQPKPPDKAPAKGDKAEPVPGRKTRKIEGFTFVFSEDAVTADPSKYERPPLEVLEYECKLLSKMLSPKALDVLRRLVIFVDWDDRVALANGRSGAALASYYSHSPQQIVAEGKHPLQSRGVTIHSLKALTEQRQPKNDARIPCLLLHEFAHAVHDQLFGYDHAGIKAAYEQAMERSLYEKDFYAATNAREFFAEMTCVYLDRLNYYPHTRADLKKHDPVTFKTLEGIWSVAEPATKTAKAPLPHSEKASLDVSLPADVKFGPTLAGPEPVAADLAGKVVLIGYWGAEFTNVLPRLDRLHGELADYGLVVVGAHAYERTPEEIKAAAEKRDVRVAVVRGTFIKDESGKAFKGQPGGRAVLFDHTGKCVYRSSAYDADAAVRAAVGKRLLATAVGSDEVPPAFKSVADAFAAGAGPVAAYPKLGPLTNSSDADTKDRAKKLAELILAPGQKALTGAQASAKSDPVGAFVAAEQVAARFKNTPLAAKATNLTTNLRGDKAVAAELKARTVATQVQQLGNRLRAQEGSFSPGESAFLSKNQAAIEQLKALLEQLRKQYPTARATAEAEKVAREFQIP
>NZ_CP053452.1|WP_171471721.1|3909416_3910706_+|SGNH/GDSL-hydrolase-family-protein
MARLFSPAALTGVLATIVALAAPPVRAAEPKAAPAPADAPAFFFKPNDRIVFLGDSITEQYQYSSYIELYLTTRMPKGNFTFLNAGIGGDTAYGGASRFQTHVLAEKPTAVTINFGMNDGGYGAFNPGNNKVFVEKTAAMLEMADKAGARVALLSPNAVDRRNKSNGKQYVETQKQFYAPLKDLAAKHKVSYVDQYATTRAATEKMEVDDPAAKKAVPYPDGFHTASPGGLLMAHAILTGLHAPALVSDVGIQVGNGKADTKACTVTDLKGDETSVSFTRTDDALPMPVQKDWLPMLPYTNELKDLNYYGLTVKGLNGGDYTVTIDGAAVGKFSAKELAAGVNLGTVTTGPVWEQGNKVLRAINAKNEMVKQRFFGVVRFTPPDWLADVAAERKPIELKKRMDKIDAAQAEIYKLAAPVAHKFEVTPAQ
>NZ_CP053452.1|WP_171471720.1|3908430_3909285_+|FAD-dependent-thymidylate-synthase
MVVPTPYAVTSAVDNGIRVITDPSVYVLGKQTVDAAELDRFLADHGVSWESDSEVAGEVLTETAGRVCYMSFAKPRPGGNAAYLTHIKEVGHGSVLEHAVWNLLLTGVSRSLTHELVRHRAGFGFSQLSQRYVDESVAEYVEPDIIANDPELHAIWLETVKQSHAAYVKLAEALNAKLADSAAATAAMLPPGADRTTRRKAARQAARSVLPNATETKIFITGNARALRHFMEQRGSAQAEPEIRKLAGKILDVLQKDAPNLFGDYQKVPLPDGTFELVTPFKKV
>NZ_CP053452.1|WP_171471719.1|3907407_3908295_-|GNAT-family-N-acetyltransferase
MPPFVVSRAASHELLPACRILFEGRAEHSRDYLLAEGGASGLFVARAASGRLHAAALVESLSGALGVALVPRGDSPAVVDAVAAAGCAWLRERGVKVCQAFVAEREEAEAAALARHGFRPVTQLAYLRRAVGPSFGAPTPPVLWHPWPSEPTREHTDLLLATHDGTLDCPEMNDTRTPEEIVGGFRPTDVANRSWWSAADAGGAVGVLLLVGGPDCALEVSYLGLAPGARGRGLAGSLLRFADDVARLMGRRELSVSVDVRNAPAMKLYARHGFVEYDRRGVWLAHFLVPESVTD
>NZ_CP053452.1|WP_171476068.1|3905419_3907033_-|chromosomal-replication-initiator-protein-DnaA
MGGEPPAGSPRTPLPASGGKPPAGSPLSVASRRPTAEALADAVAARVGAGRFNLWFQGHARFVPLGTAVVVASRNPHTQEWLEHTFGAAVKEAVAEVCGAGVPVQWEVDAEALDGVEETRNVERGTRSEDKTGKELPVPRSAPRTSPSADAAPRAAPPQVDLFGDPVVPPKPKLKRPNPDEVALARPLATQRTGRRWKALADFVAGPCNRVAHASALSVVEEPGQGANPLVIHGPVGTGKTHLLEGIYLGLKKQGDQRPCYVTAEEFTTRFVQASRLGKMSAFRRQFRECSTLLLDDLHFLATRKATQEEFLHTFDALVADGRQVVVTTDCHPRLADELMPELVDRLLGGAVWGLLPPDPETRLEILRKKSCGAAPAIPDAVLKSLAASLRGNVRELEGAVNSVRHYAKVTGRPADMQTAREALGDLLRHAVRVVSVADVDAAVCATLRLAAGTLQSKARSWAVSHPRMIAIYLCRKHTAATYGEISKHFGAKTHSTAVAAEKKVRAWADKSASVAIGDRDWPVKELLDRVERELQR
>NZ_CP053452.1|WP_171471718.1|3905170_3905410_+|hypothetical-protein
MDDAARTELRAVWNSAPASDDPLLVWAVADIAFRLERNPESEGESRPQNTRVMFSRPLSALFDIPDTDTVWIHSVWRHA
>NZ_CP053452.1|WP_171471717.1|3904926_3905157_+|hypothetical-protein
MDEQMRAKLGKDEPVMICTADGVVLGYFTPTTQPQKLKLEPQIDEEEIARRLADRTPPTYTTEEVIIYLRGLEKGQ
>NZ_CP053452.1|WP_171471716.1|3904052_3904964_+|sterol-desaturase-family-protein
MDITALLLGTGLSLLFLVAVFRPLELAFPAKPGQRFFRPAWALDLSFLLGQYLLWNGLVFWCLWHSRDALGALVPPEFRSAVAAQPFWLRIVEVVLLSDFCVYWGHRLQHRSSFLWRFHSVHHTAEHLDWLAAHREHPLDTVYTLTLINLPAFVLGFPLETLAGFIAFRGIWAIYIHSNVRLPLGPLRSILGAPELHHWHHSRDRDAGNYGNVCPLMDRIFGTHVCPDHEPESFGINQPSPTTWIGHMVQPLLPRRRKSGGEGAAGAKGEGELECVGEVSHTGGTDDPTDNRGRADACEVGQR
>NZ_CP053452.1|WP_171471715.1|3903631_3904033_+|hypothetical-protein
MSRARPYLQAAALVSSVLLVGAFIGCRSGAFQPFAKPEPQPATQPAPEKPPTFMPGSKSPGSVGPGYAIGLSPAGGSAPNDPARPTTTEPAPEKKPVLMGGPKSAPVFGPVTGPTPANEPPAPPPATPNTPAP
>NZ_CP053452.1|WP_171471714.1|3903113_3903542_+|hypothetical-protein
MDRAKPYLKVAALLSAVALVGALVAYRAGAFSTPVPSEAPGDPQPTAVPRPTAEQLAPTPDPHPALMYGSKSAPAFLPGESAQALGAVPGPVPVTPTSPDKPPTFIGGSKSIILVPAGQLPGLTPSHPPNMPPPTPPGAPKP
>NZ_CP053452.1|WP_171471724.1|3914856_3916725_+|L-lactate-permease
MPLAYVQELNPLPVGGYTVVSTAVAGLPVLVLFYLLVGRRWLASWAGCAGAVVAVLLAWLVYGMAPEMAGAAFGYGAAFGLMPIGWTVFAAMLLYNVTVETGQFTVIRRSIGGLSTDARVQAVLIGFAFGAFMEGAAGAGSPVAICGAMLVGLGVPPFRAAVICLIANTSPVCYGGLGVPIITLATSSGVSADRISIMCGHQLPILSCLIPLYMVKCMCTWRQTLAIWPALVVGGGSFAAFQFFFATAHAYGLVPIWQLTDIGGGLFSLAALALFLKFVWKPRDEWRFPEGVPSAERQPPVRPGARGADAPRPDPLSEHAKEEVEHLFGTAPAAHPEAPLTVRTVAVAWAPWILMALCLVGSGVVRHLEGKKGAALDLFGLKTYYDVEVPGLHQRVQRADRLVPPGTTDEDKREKAVFRFNWLTAPGTPVAVAALISMVLLRMARAQVAAVCRNTAWQMRVPIPTIAFMLGLSYVTKFAGMDATLGVAFAATGVLYPFFAAVLGWLGVFLTGTDAGSNALFGGLQKITATEVWNAHHAGALSELTLEQAQVLICTANSTGGVMGKMIDAQSICVATAGTNQVGKEADIFKAVIGHSLFLASIVGLLTALQAFVPPFTLMVPK
>NZ_CP053452.1|WP_171471725.1|3916773_3917469_-|dual-specificity-protein-phosphatase-family-protein
MSAYGLVFAALAALAVATGALAREWVLRAGAAAVALSFLVVAVAYSGAGPRLLFKSPTGRRFVWAWGVHWPFFVFTAFAYHLSRLLTREAAHVRVAPNVFLGRRLSAREARHASAEGWLAVLDLAAELPEAPPLRTVTHYRSLPVLDATAMSLQELRAAVEWVTRHAASGPVYVHCALGHGRSAVVVAAYLIATGQAPDAPAALKHLRERRPGVRLHRSQRRVLDQFAGEG
>NZ_CP053452.1|WP_171471726.1|3917468_3918497_-|PmoA-family-protein
MRCHLFPLIVVLVLPRVAPADDVSIVVGKDAIEFRAGPAVVAKYATAASVAKPYLYPVLAPNGVGVTRAWPVEKGLPGEASRDHVHQKSVWFCHGDVIPEGIELKVKSVNKGDKGVDFWSEAKDKDGTARHGTIACVNVGKPVPHGKDHASIETHNEWRTPDGTKIMDEVRVIHFTDGKEGRTFAFDITLRATVCPITFGDTKEGSFGIRVHDELRPQEKTGAIVTTADGKTVAPPAKDNMPIWGYPTDWIDYSGTVDGKEVGIAVFDHPSNPRSSWHVRAYGLNAANPFGRVLSLFPSQRDKTELLKIAKGGELKLKYAVYAHTGDVKSGKVAEAFDQFKK
>NZ_CP053452.1|WP_171471727.1|3918806_3919985_+|ribosome-small-subunit-dependent-GTPase-A
MSKKKKVRVELRKNREKPPRENDLTRDFAEGDGRADDAQSGERVRAKGSLSRYRTVVQTEATDGTAMPAVDEGECVRGRVLRVHGLASVVETDDGRIFRCAVRRLLKSLATDERSVVTTGDVVWIRAARGSTAPAPEPPPSDEPGQVPAVEGVIERVEPRHGVLTRASRRREHVLVANVDQLVIVMSLVEPDLKPHLIDRYLAVAQQGELKPVLCLNKADLADAVELQPLIGLYSQLGIPVFLCSARTGYGVERLREQLRGRSTVFSGQSGVGKSSLLNAIQPDLALAVKSVSEVNQKGRHTTTYSQLIKLDFGGWVVDTPGVRQMQLWDARPEEMEGYFPEFRPFVPLCGFPDCTHTHETDCAVKDAVARRYITSRRYHSYLGLFNGTAEE
>NZ_CP053452.1|WP_171471728.1|3920185_3922981_+|WD40-repeat-domain-containing-protein
MSRFAVRRVATQLLRNESRRPRLAGDERFANVRDEDAFAELVARPGAAALRGGFAMKAVALAAAVLVACGVAFASVIGPASETPDSSNDPPAAAPKTNESAGADVPSEALPASAVARLGTVRLRTIGQVKHMAFSPDGTKLASWSGDYSGTDEFTVWDAKTGRALRRVDLAGATVHRLTWLADGRGIALIGSGGLDTVPVVWEFTDEKGARSPVKPWRIVKPLHAITGPSGSEPDNEYDACYTISPDGRVLATGKAGQLLVDREVQLWEVKTGVKANALRPLKGGVIHPGNCEEIDFTPDARTLVVFKQAKYLGNHQFERERLVTVWDVKTSREKVRFTAPCPATSGRPAVALSDTTLAIGLDSGGTSLWDLKTGKERRIDTAHASKKPSEGVGTHSVAFSPDGTTLATGGGDGATKLWDLASGHLRHTLAGHHTWVQALAVAPNGKRIASGGADGMIRLWDTATGADACPLPGHKCLIGKVVLSPDGKLAVTAGADGTLRWWDAATGAERRSVAVPGALTGLAVSPDGKTVLTGAGDGKLRMWDSETGREKPATLQADVELGPLSFTPDGKHLVAVAGPKVTIWEWPGLKLARTIDMLKPGPNAVPAPTDNLTSWCQSAAVSPDGKWLVTTAWQSGSEEIDGVRSPFASNGVADVWELASGKRVRRLAKAHISFRFGTLCSGQFRSGTFTTDGRFVLIGANGAITRNDGKDGESFSDEVNLLDPIAGRVVQGFDESPASGSDRGRYSGASALSPNGRTYYVSYSTGEIVGYEVSTGKPRRAFVGHRGYIDGLAFSADGRRLISGSHDGTALVWDATLAGRRAPRANPLTDAEVTKLWDTVDGNDARAAFAAMAELARSPDQAMEVLRRHVKPTPAAPTDATRVRHIRAVELLEGLGTPAARKLLTELAAGKADAPLTLDAAAALKRLGKP
>NZ_CP053452.1|WP_171471729.1|3923518_3923959_+|hypothetical-protein
MPRSIKMIGFVLVTLFGAYGCAKGPGTASTDNTNATAHAQKLEDDYRAAIAARDQFRQKLVTAEEKYTKAQKQLQQELEQTRATAAAEKESLRGEVKARTGERDALNAQFETFRKSLKELLGSADTAVGALNLPAPKPAADQGAVR
>NZ_CP053452.1|WP_171471730.1|3923940_3925467_-|Gfo/Idh/MocA-family-oxidoreductase
MPTPLDRRKFFGSAAALSLSAASYGNVSGSNDRVRVGFLGCGGRAQAHIDLITRFASEGKPVAPVAVCDVWDGLEDEYDVHFGGKVTRRRYSQGLYPSARKCQLDRADRTRVTKDYRVVLDRPDVDVVCITTPDHWHGKMTVDALAAGKDVYVEKPMTRTAEEAVAVVDAWKHTGRVVTVGVQAMADAVWMRAFDAVRTGAIGHVAHAQTGLFRNDARGQWRFYRLAKQMTPQTVDWDLFLGHAFECAGARVGPTPREQPFDRASFAQWRCVWPFSGGPFTDMLSHHITRMSAAMGVRFPARVAAGGGLYLEYDGRDVPDVGTVVADYEEGCQLVVTATTLSGYPMEEVIRGRLGAIKFVRGGFQVFKDDPTRGASYPPRMEQSPEPVSFEAVEPPRNETEALWENFLECVRARRQSTFSPPDLGAVAVATAAMAVQSYRTGAALFWDKEKRAIASADSTWAKRWEKRSRDRAKPNQVFGWSGGDGGTVQPPPHQSLAERPDCYRTAP
>NZ_CP053452.1|WP_171471731.1|3925699_3926806_+|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit
MHAKLALADGTVFTGRGFGATGETIGEVVFNTSMMGYQEVLTDPSYTGQIVTMTYPLIGNYGTTADDQESARVQVAGFIVRQLARVPSNFRSTSTLHDFLKASHVVGIEGIDTRALVRRLRVRGSMNGVLSTADLDDASLVQKARAFPGMEGRDLVKEVVPAQAFHWNTGFGAFADHVLPHRPATKRVVAIDYGMKWNILRCLAQTGCDVTVVPGTASAEEVLSHDPDGIFLSNGPGDPAAVGYAITTVKNLIGKKPIFGICLGHQLLGLAFGAKTFKLKFGHRGANQPVRNELTKKIEITTQNHGFAVDPTTLPKDVMPTHINLNDNTLEGLKHTSLPVFSVQYHPEAAAGPHDSSYLFEEFRTMMG
>NZ_CP053452.1|WP_171476069.1|3927382_3927628_+|hypothetical-protein
MLRDVFGNPFRPINFAPDLRTDTALALATQMYESRDFGAMPVLADALQDAGCDSDDILSHCRGPGPHARGCWVVDRVLGKE
>NZ_CP053452.1|WP_171471732.1|3927698_3928760_+|HNH-endonuclease
MSSSFLQYFNVEKMGRFPNGADALLTTRMGVYSKLAAVQQARGGTVYVISGLGKPKKYVLWEAFTIEDITKQDDQFVVSGPGRVLLPPAELSGKAFEKFKAACANFIGFRKIDDQTYTATLKSLADANAQAALSPACEAFCGELIAAFPKMGDAYYYRGHVRQHLGNAIGAKADFEQALKLGTNFPNETRAAIAAGEKPAVSSAPAARTDIAAQVVTRGVFSEKTPAGVSVGVWQGVLQRRGAEDLRQRLLKAYGGKCAISGTDAEAALEVALIDPDGPTEPKNALLLRADLRTLFDLNLLRIYPRTRKVLLAEAVQSGTYARLWARPLRAPARKDDAPAFAALEKRWTATKV

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Crispr_ID: NZ_CP053452_19

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053452_19

3913371-3913560

Orphan

Consensus_repeat	Method
ACGGTGACGGTCTTCTGCACCGGCACC	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP053452_19

>merge|NZ_CP053452|19|3913371-3913560|CRISPRCasFinder
ACCTTGACCTTCTCCTGAACCGGCACGCACACGGTCACGTTGCGGGTGGCCTGGTAGGGGACGCACTTGTTCACGTTGACGGTCTTGGTCACCGTCTCAACGGTCGGCACGCAGCGGGTGCGGGTGACGGGCACGGCCACCGTCTTAGTCACGCACTCGTAGGCGGTGATGGTCTTGGTGACCGGCACGC

>NZ_CP053452|19|19|3913371-3913560|CRISPRCasFinder
ACCTTGACCTTCTCCTGAACCGGCACG	CACACGGTCACGTTGCGGGTGGCCTGGTAGGGGACGCACTTGTTC
ACGTTGACGGTCTTGGTCACCGTCTCA	ACGGTCGGCACGCAGCGGGTGCGGGTGACGGGCACGGCCACCGTCTTAGTCACGCACTCGTAG
GCGGTGATGGTCTTGGTGACCGGCACGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053452.1\|WP_171471716.1\|3904052_3904964_+\|sterol-desaturase-family-protein	unknown	unknown	gnl\|CDD\|225546
NZ_CP053452.1\|WP_171471732.1\|3927698_3928760_+\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|379157
NZ_CP053452.1\|WP_171476069.1\|3927382_3927628_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171471724.1\|3914856_3916725_+\|L-lactate-permease	unknown	unknown	gnl\|CDD\|224535
NZ_CP053452.1\|WP_171476068.1\|3905419_3907033_-\|chromosomal-replication-initiator-protein-DnaA	unknown	unknown	gnl\|CDD\|234667
NZ_CP053452.1\|WP_171471718.1\|3905170_3905410_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171471720.1\|3908430_3909285_+\|FAD-dependent-thymidylate-synthase	unknown	unknown	gnl\|CDD\|234847
NZ_CP053452.1\|WP_171471727.1\|3918806_3919985_+\|ribosome-small-subunit-dependent-GTPase-A	unknown	unknown	gnl\|CDD\|206747
NZ_CP053452.1\|WP_171471729.1\|3923518_3923959_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|275124
NZ_CP053452.1\|WP_171471714.1\|3903113_3903542_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171471721.1\|3909416_3910706_+\|SGNH/GDSL-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|238872
NZ_CP053452.1\|WP_171471730.1\|3923940_3925467_-\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP053452.1\|WP_171471726.1\|3917468_3918497_-\|PmoA-family-protein	unknown	unknown	gnl\|CDD\|379468
NZ_CP053452.1\|WP_171471725.1\|3916773_3917469_-\|dual-specificity-protein-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|350376
NZ_CP053452.1\|WP_171471717.1\|3904926_3905157_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171471719.1\|3907407_3908295_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379228
NZ_CP053452.1\|WP_171471731.1\|3925699_3926806_+\|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit	unknown	unknown	gnl\|CDD\|237139
NZ_CP053452.1\|WP_171471728.1\|3920185_3922981_+\|WD40-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|238121
NZ_CP053452.1\|WP_171471722.1\|3910879_3912682_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|239264
NZ_CP053452.1\|WP_171471715.1\|3903631_3904033_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237057

Protein	Function_ID	Function_description	E-value
NZ_CP053452.1\|WP_171471716.1\|3904052_3904964_+\|sterol-desaturase-family-protein	gnl\|CDD\|225546	COG3000, ERG3, Sterol desaturase [Lipid metabolism].	2.30707e-35
NZ_CP053452.1\|WP_171471731.1\|3925699_3926806_+\|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit	gnl\|CDD\|237139	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit.	0
NZ_CP053452.1\|WP_171471724.1\|3914856_3916725_+\|L-lactate-permease	gnl\|CDD\|224535	COG1620, LldP, L-lactate permease [Energy production and conversion].	5.71849e-133
NZ_CP053452.1\|WP_171476068.1\|3905419_3907033_-\|chromosomal-replication-initiator-protein-DnaA	gnl\|CDD\|234667	PRK00149, dnaA, chromosomal replication initiator protein DnaA.	7.60646e-106
NZ_CP053452.1\|WP_171471732.1\|3927698_3928760_+\|HNH-endonuclease	gnl\|CDD\|379157	pfam13391, HNH_2, HNH endonuclease.	1.02399e-06
NZ_CP053452.1\|WP_171471720.1\|3908430_3909285_+\|FAD-dependent-thymidylate-synthase	gnl\|CDD\|234847	PRK00847, thyX, FAD-dependent thymidylate synthase; Reviewed.	1.30833e-61
NZ_CP053452.1\|WP_171471729.1\|3923518_3923959_+\|hypothetical-protein	gnl\|CDD\|275124	TIGR04320, hypothetical_protein, SEC10/PgrA surface exclusion domain. This model describes a conserved domain found in surface proteins of a number of Firmutes. Many members have LPXTG C-terminal anchoring motifs and a substantial number have the KxYKxGKxW putative sorting signal at the N-terminus. The tetracycline resistance plasmid pCF10 in Enterococcus faecalis promotes conjugal plasmid transfer in response to sex pheromones, but PgrA/Sec10 encoded by that plasmid, a member of this family, specifically inhibits the ability of cells to receive homologous plasmids. The phenomenon is called surface exclusion.	0.00870476
NZ_CP053452.1\|WP_171471721.1\|3909416_3910706_+\|SGNH/GDSL-hydrolase-family-protein	gnl\|CDD\|238872	cd01834, SGNH_hydrolase_like_2, SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.	1.0848e-36
NZ_CP053452.1\|WP_171471730.1\|3923940_3925467_-\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	1.44733e-28
NZ_CP053452.1\|WP_171471727.1\|3918806_3919985_+\|ribosome-small-subunit-dependent-GTPase-A	gnl\|CDD\|206747	cd01854, YjeQ_EngC, Ribosomal interacting GTPase YjeQ/EngC, a circularly permuted subfamily of the Ras GTPases. YjeQ (YloQ in Bacillus subtilis) is a ribosomal small subunit-dependent GTPase; hence also known as RsgA. YjeQ is a late-stage ribosomal biogenesis factor involved in the 30S subunit maturation, and it represents a protein family whose members are broadly conserved in bacteria and have been shown to be essential to the growth of E. coli and B. subtilis. Proteins of the YjeQ family contain all sequence motifs typical of the vast class of P-loop-containing GTPases, but show a circular permutation, with a G4-G1-G3 pattern of motifs as opposed to the regular G1-G3-G4 pattern seen in most GTPases. All YjeQ family proteins display a unique domain architecture, which includes an N-terminal OB-fold RNA-binding domain, the central permuted GTPase domain, and a zinc knuckle-like C-terminal cysteine domain.	3.41309e-110
NZ_CP053452.1\|WP_171471725.1\|3916773_3917469_-\|dual-specificity-protein-phosphatase-family-protein	gnl\|CDD\|350376	cd14527, DSP_bac, unknown subfamily of bacterial and plant dual specificity protein phosphatases. This subfamily is composed of uncharacterized bacterial and plant dual-specificity protein phosphatases. DUSPs function as a protein-serine/threonine phosphatases (EC 3.1.3.16) and a protein-tyrosine-phosphatases (EC 3.1.3.48).	1.76867e-31
NZ_CP053452.1\|WP_171471719.1\|3907407_3908295_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379228	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	3.85351e-09
NZ_CP053452.1\|WP_171471715.1\|3903631_3904033_+\|hypothetical-protein	gnl\|CDD\|237057	PRK12323, PRK12323, DNA polymerase III subunit gamma/tau.	0.0019216
NZ_CP053452.1\|WP_171471728.1\|3920185_3922981_+\|WD40-repeat-domain-containing-protein	gnl\|CDD\|238121	cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment.	5.04382e-43
NZ_CP053452.1\|WP_171471722.1\|3910879_3912682_+\|hypothetical-protein	gnl\|CDD\|239264	cd02966, TlpA_like_family, TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.	6.23266e-09
NZ_CP053452.1\|WP_171471726.1\|3917468_3918497_-\|PmoA-family-protein	gnl\|CDD\|379468	pfam14100, PmoA, Methane oxygenase PmoA. This family is a putative methane oxygenase.	1.89712e-57

>NZ_CP053452.1|WP_171471722.1|3910879_3912682_+|hypothetical-protein
MRPLSRLLLLAGCAWFAAHAAGAQEPKAQPKPPDKAPAKGDKAEPVPGRKTRKIEGFTFVFSEDAVTADPSKYERPPLEVLEYECKLLSKMLSPKALDVLRRLVIFVDWDDRVALANGRSGAALASYYSHSPQQIVAEGKHPLQSRGVTIHSLKALTEQRQPKNDARIPCLLLHEFAHAVHDQLFGYDHAGIKAAYEQAMERSLYEKDFYAATNAREFFAEMTCVYLDRLNYYPHTRADLKKHDPVTFKTLEGIWSVAEPATKTAKAPLPHSEKASLDVSLPADVKFGPTLAGPEPVAADLAGKVVLIGYWGAEFTNVLPRLDRLHGELADYGLVVVGAHAYERTPEEIKAAAEKRDVRVAVVRGTFIKDESGKAFKGQPGGRAVLFDHTGKCVYRSSAYDADAAVRAAVGKRLLATAVGSDEVPPAFKSVADAFAAGAGPVAAYPKLGPLTNSSDADTKDRAKKLAELILAPGQKALTGAQASAKSDPVGAFVAAEQVAARFKNTPLAAKATNLTTNLRGDKAVAAELKARTVATQVQQLGNRLRAQEGSFSPGESAFLSKNQAAIEQLKALLEQLRKQYPTARATAEAEKVAREFQIP
>NZ_CP053452.1|WP_171471721.1|3909416_3910706_+|SGNH/GDSL-hydrolase-family-protein
MARLFSPAALTGVLATIVALAAPPVRAAEPKAAPAPADAPAFFFKPNDRIVFLGDSITEQYQYSSYIELYLTTRMPKGNFTFLNAGIGGDTAYGGASRFQTHVLAEKPTAVTINFGMNDGGYGAFNPGNNKVFVEKTAAMLEMADKAGARVALLSPNAVDRRNKSNGKQYVETQKQFYAPLKDLAAKHKVSYVDQYATTRAATEKMEVDDPAAKKAVPYPDGFHTASPGGLLMAHAILTGLHAPALVSDVGIQVGNGKADTKACTVTDLKGDETSVSFTRTDDALPMPVQKDWLPMLPYTNELKDLNYYGLTVKGLNGGDYTVTIDGAAVGKFSAKELAAGVNLGTVTTGPVWEQGNKVLRAINAKNEMVKQRFFGVVRFTPPDWLADVAAERKPIELKKRMDKIDAAQAEIYKLAAPVAHKFEVTPAQ
>NZ_CP053452.1|WP_171471720.1|3908430_3909285_+|FAD-dependent-thymidylate-synthase
MVVPTPYAVTSAVDNGIRVITDPSVYVLGKQTVDAAELDRFLADHGVSWESDSEVAGEVLTETAGRVCYMSFAKPRPGGNAAYLTHIKEVGHGSVLEHAVWNLLLTGVSRSLTHELVRHRAGFGFSQLSQRYVDESVAEYVEPDIIANDPELHAIWLETVKQSHAAYVKLAEALNAKLADSAAATAAMLPPGADRTTRRKAARQAARSVLPNATETKIFITGNARALRHFMEQRGSAQAEPEIRKLAGKILDVLQKDAPNLFGDYQKVPLPDGTFELVTPFKKV
>NZ_CP053452.1|WP_171471719.1|3907407_3908295_-|GNAT-family-N-acetyltransferase
MPPFVVSRAASHELLPACRILFEGRAEHSRDYLLAEGGASGLFVARAASGRLHAAALVESLSGALGVALVPRGDSPAVVDAVAAAGCAWLRERGVKVCQAFVAEREEAEAAALARHGFRPVTQLAYLRRAVGPSFGAPTPPVLWHPWPSEPTREHTDLLLATHDGTLDCPEMNDTRTPEEIVGGFRPTDVANRSWWSAADAGGAVGVLLLVGGPDCALEVSYLGLAPGARGRGLAGSLLRFADDVARLMGRRELSVSVDVRNAPAMKLYARHGFVEYDRRGVWLAHFLVPESVTD
>NZ_CP053452.1|WP_171476068.1|3905419_3907033_-|chromosomal-replication-initiator-protein-DnaA
MGGEPPAGSPRTPLPASGGKPPAGSPLSVASRRPTAEALADAVAARVGAGRFNLWFQGHARFVPLGTAVVVASRNPHTQEWLEHTFGAAVKEAVAEVCGAGVPVQWEVDAEALDGVEETRNVERGTRSEDKTGKELPVPRSAPRTSPSADAAPRAAPPQVDLFGDPVVPPKPKLKRPNPDEVALARPLATQRTGRRWKALADFVAGPCNRVAHASALSVVEEPGQGANPLVIHGPVGTGKTHLLEGIYLGLKKQGDQRPCYVTAEEFTTRFVQASRLGKMSAFRRQFRECSTLLLDDLHFLATRKATQEEFLHTFDALVADGRQVVVTTDCHPRLADELMPELVDRLLGGAVWGLLPPDPETRLEILRKKSCGAAPAIPDAVLKSLAASLRGNVRELEGAVNSVRHYAKVTGRPADMQTAREALGDLLRHAVRVVSVADVDAAVCATLRLAAGTLQSKARSWAVSHPRMIAIYLCRKHTAATYGEISKHFGAKTHSTAVAAEKKVRAWADKSASVAIGDRDWPVKELLDRVERELQR
>NZ_CP053452.1|WP_171471718.1|3905170_3905410_+|hypothetical-protein
MDDAARTELRAVWNSAPASDDPLLVWAVADIAFRLERNPESEGESRPQNTRVMFSRPLSALFDIPDTDTVWIHSVWRHA
>NZ_CP053452.1|WP_171471717.1|3904926_3905157_+|hypothetical-protein
MDEQMRAKLGKDEPVMICTADGVVLGYFTPTTQPQKLKLEPQIDEEEIARRLADRTPPTYTTEEVIIYLRGLEKGQ
>NZ_CP053452.1|WP_171471716.1|3904052_3904964_+|sterol-desaturase-family-protein
MDITALLLGTGLSLLFLVAVFRPLELAFPAKPGQRFFRPAWALDLSFLLGQYLLWNGLVFWCLWHSRDALGALVPPEFRSAVAAQPFWLRIVEVVLLSDFCVYWGHRLQHRSSFLWRFHSVHHTAEHLDWLAAHREHPLDTVYTLTLINLPAFVLGFPLETLAGFIAFRGIWAIYIHSNVRLPLGPLRSILGAPELHHWHHSRDRDAGNYGNVCPLMDRIFGTHVCPDHEPESFGINQPSPTTWIGHMVQPLLPRRRKSGGEGAAGAKGEGELECVGEVSHTGGTDDPTDNRGRADACEVGQR
>NZ_CP053452.1|WP_171471715.1|3903631_3904033_+|hypothetical-protein
MSRARPYLQAAALVSSVLLVGAFIGCRSGAFQPFAKPEPQPATQPAPEKPPTFMPGSKSPGSVGPGYAIGLSPAGGSAPNDPARPTTTEPAPEKKPVLMGGPKSAPVFGPVTGPTPANEPPAPPPATPNTPAP
>NZ_CP053452.1|WP_171471714.1|3903113_3903542_+|hypothetical-protein
MDRAKPYLKVAALLSAVALVGALVAYRAGAFSTPVPSEAPGDPQPTAVPRPTAEQLAPTPDPHPALMYGSKSAPAFLPGESAQALGAVPGPVPVTPTSPDKPPTFIGGSKSIILVPAGQLPGLTPSHPPNMPPPTPPGAPKP
>NZ_CP053452.1|WP_171471724.1|3914856_3916725_+|L-lactate-permease
MPLAYVQELNPLPVGGYTVVSTAVAGLPVLVLFYLLVGRRWLASWAGCAGAVVAVLLAWLVYGMAPEMAGAAFGYGAAFGLMPIGWTVFAAMLLYNVTVETGQFTVIRRSIGGLSTDARVQAVLIGFAFGAFMEGAAGAGSPVAICGAMLVGLGVPPFRAAVICLIANTSPVCYGGLGVPIITLATSSGVSADRISIMCGHQLPILSCLIPLYMVKCMCTWRQTLAIWPALVVGGGSFAAFQFFFATAHAYGLVPIWQLTDIGGGLFSLAALALFLKFVWKPRDEWRFPEGVPSAERQPPVRPGARGADAPRPDPLSEHAKEEVEHLFGTAPAAHPEAPLTVRTVAVAWAPWILMALCLVGSGVVRHLEGKKGAALDLFGLKTYYDVEVPGLHQRVQRADRLVPPGTTDEDKREKAVFRFNWLTAPGTPVAVAALISMVLLRMARAQVAAVCRNTAWQMRVPIPTIAFMLGLSYVTKFAGMDATLGVAFAATGVLYPFFAAVLGWLGVFLTGTDAGSNALFGGLQKITATEVWNAHHAGALSELTLEQAQVLICTANSTGGVMGKMIDAQSICVATAGTNQVGKEADIFKAVIGHSLFLASIVGLLTALQAFVPPFTLMVPK
>NZ_CP053452.1|WP_171471725.1|3916773_3917469_-|dual-specificity-protein-phosphatase-family-protein
MSAYGLVFAALAALAVATGALAREWVLRAGAAAVALSFLVVAVAYSGAGPRLLFKSPTGRRFVWAWGVHWPFFVFTAFAYHLSRLLTREAAHVRVAPNVFLGRRLSAREARHASAEGWLAVLDLAAELPEAPPLRTVTHYRSLPVLDATAMSLQELRAAVEWVTRHAASGPVYVHCALGHGRSAVVVAAYLIATGQAPDAPAALKHLRERRPGVRLHRSQRRVLDQFAGEG
>NZ_CP053452.1|WP_171471726.1|3917468_3918497_-|PmoA-family-protein
MRCHLFPLIVVLVLPRVAPADDVSIVVGKDAIEFRAGPAVVAKYATAASVAKPYLYPVLAPNGVGVTRAWPVEKGLPGEASRDHVHQKSVWFCHGDVIPEGIELKVKSVNKGDKGVDFWSEAKDKDGTARHGTIACVNVGKPVPHGKDHASIETHNEWRTPDGTKIMDEVRVIHFTDGKEGRTFAFDITLRATVCPITFGDTKEGSFGIRVHDELRPQEKTGAIVTTADGKTVAPPAKDNMPIWGYPTDWIDYSGTVDGKEVGIAVFDHPSNPRSSWHVRAYGLNAANPFGRVLSLFPSQRDKTELLKIAKGGELKLKYAVYAHTGDVKSGKVAEAFDQFKK
>NZ_CP053452.1|WP_171471727.1|3918806_3919985_+|ribosome-small-subunit-dependent-GTPase-A
MSKKKKVRVELRKNREKPPRENDLTRDFAEGDGRADDAQSGERVRAKGSLSRYRTVVQTEATDGTAMPAVDEGECVRGRVLRVHGLASVVETDDGRIFRCAVRRLLKSLATDERSVVTTGDVVWIRAARGSTAPAPEPPPSDEPGQVPAVEGVIERVEPRHGVLTRASRRREHVLVANVDQLVIVMSLVEPDLKPHLIDRYLAVAQQGELKPVLCLNKADLADAVELQPLIGLYSQLGIPVFLCSARTGYGVERLREQLRGRSTVFSGQSGVGKSSLLNAIQPDLALAVKSVSEVNQKGRHTTTYSQLIKLDFGGWVVDTPGVRQMQLWDARPEEMEGYFPEFRPFVPLCGFPDCTHTHETDCAVKDAVARRYITSRRYHSYLGLFNGTAEE
>NZ_CP053452.1|WP_171471728.1|3920185_3922981_+|WD40-repeat-domain-containing-protein
MSRFAVRRVATQLLRNESRRPRLAGDERFANVRDEDAFAELVARPGAAALRGGFAMKAVALAAAVLVACGVAFASVIGPASETPDSSNDPPAAAPKTNESAGADVPSEALPASAVARLGTVRLRTIGQVKHMAFSPDGTKLASWSGDYSGTDEFTVWDAKTGRALRRVDLAGATVHRLTWLADGRGIALIGSGGLDTVPVVWEFTDEKGARSPVKPWRIVKPLHAITGPSGSEPDNEYDACYTISPDGRVLATGKAGQLLVDREVQLWEVKTGVKANALRPLKGGVIHPGNCEEIDFTPDARTLVVFKQAKYLGNHQFERERLVTVWDVKTSREKVRFTAPCPATSGRPAVALSDTTLAIGLDSGGTSLWDLKTGKERRIDTAHASKKPSEGVGTHSVAFSPDGTTLATGGGDGATKLWDLASGHLRHTLAGHHTWVQALAVAPNGKRIASGGADGMIRLWDTATGADACPLPGHKCLIGKVVLSPDGKLAVTAGADGTLRWWDAATGAERRSVAVPGALTGLAVSPDGKTVLTGAGDGKLRMWDSETGREKPATLQADVELGPLSFTPDGKHLVAVAGPKVTIWEWPGLKLARTIDMLKPGPNAVPAPTDNLTSWCQSAAVSPDGKWLVTTAWQSGSEEIDGVRSPFASNGVADVWELASGKRVRRLAKAHISFRFGTLCSGQFRSGTFTTDGRFVLIGANGAITRNDGKDGESFSDEVNLLDPIAGRVVQGFDESPASGSDRGRYSGASALSPNGRTYYVSYSTGEIVGYEVSTGKPRRAFVGHRGYIDGLAFSADGRRLISGSHDGTALVWDATLAGRRAPRANPLTDAEVTKLWDTVDGNDARAAFAAMAELARSPDQAMEVLRRHVKPTPAAPTDATRVRHIRAVELLEGLGTPAARKLLTELAAGKADAPLTLDAAAALKRLGKP
>NZ_CP053452.1|WP_171471729.1|3923518_3923959_+|hypothetical-protein
MPRSIKMIGFVLVTLFGAYGCAKGPGTASTDNTNATAHAQKLEDDYRAAIAARDQFRQKLVTAEEKYTKAQKQLQQELEQTRATAAAEKESLRGEVKARTGERDALNAQFETFRKSLKELLGSADTAVGALNLPAPKPAADQGAVR
>NZ_CP053452.1|WP_171471730.1|3923940_3925467_-|Gfo/Idh/MocA-family-oxidoreductase
MPTPLDRRKFFGSAAALSLSAASYGNVSGSNDRVRVGFLGCGGRAQAHIDLITRFASEGKPVAPVAVCDVWDGLEDEYDVHFGGKVTRRRYSQGLYPSARKCQLDRADRTRVTKDYRVVLDRPDVDVVCITTPDHWHGKMTVDALAAGKDVYVEKPMTRTAEEAVAVVDAWKHTGRVVTVGVQAMADAVWMRAFDAVRTGAIGHVAHAQTGLFRNDARGQWRFYRLAKQMTPQTVDWDLFLGHAFECAGARVGPTPREQPFDRASFAQWRCVWPFSGGPFTDMLSHHITRMSAAMGVRFPARVAAGGGLYLEYDGRDVPDVGTVVADYEEGCQLVVTATTLSGYPMEEVIRGRLGAIKFVRGGFQVFKDDPTRGASYPPRMEQSPEPVSFEAVEPPRNETEALWENFLECVRARRQSTFSPPDLGAVAVATAAMAVQSYRTGAALFWDKEKRAIASADSTWAKRWEKRSRDRAKPNQVFGWSGGDGGTVQPPPHQSLAERPDCYRTAP
>NZ_CP053452.1|WP_171471731.1|3925699_3926806_+|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit
MHAKLALADGTVFTGRGFGATGETIGEVVFNTSMMGYQEVLTDPSYTGQIVTMTYPLIGNYGTTADDQESARVQVAGFIVRQLARVPSNFRSTSTLHDFLKASHVVGIEGIDTRALVRRLRVRGSMNGVLSTADLDDASLVQKARAFPGMEGRDLVKEVVPAQAFHWNTGFGAFADHVLPHRPATKRVVAIDYGMKWNILRCLAQTGCDVTVVPGTASAEEVLSHDPDGIFLSNGPGDPAAVGYAITTVKNLIGKKPIFGICLGHQLLGLAFGAKTFKLKFGHRGANQPVRNELTKKIEITTQNHGFAVDPTTLPKDVMPTHINLNDNTLEGLKHTSLPVFSVQYHPEAAAGPHDSSYLFEEFRTMMG
>NZ_CP053452.1|WP_171476069.1|3927382_3927628_+|hypothetical-protein
MLRDVFGNPFRPINFAPDLRTDTALALATQMYESRDFGAMPVLADALQDAGCDSDDILSHCRGPGPHARGCWVVDRVLGKE
>NZ_CP053452.1|WP_171471732.1|3927698_3928760_+|HNH-endonuclease
MSSSFLQYFNVEKMGRFPNGADALLTTRMGVYSKLAAVQQARGGTVYVISGLGKPKKYVLWEAFTIEDITKQDDQFVVSGPGRVLLPPAELSGKAFEKFKAACANFIGFRKIDDQTYTATLKSLADANAQAALSPACEAFCGELIAAFPKMGDAYYYRGHVRQHLGNAIGAKADFEQALKLGTNFPNETRAAIAAGEKPAVSSAPAARTDIAAQVVTRGVFSEKTPAGVSVGVWQGVLQRRGAEDLRQRLLKAYGGKCAISGTDAEAALEVALIDPDGPTEPKNALLLRADLRTLFDLNLLRIYPRTRKVLLAEAVQSGTYARLWARPLRAPARKDDAPAFAALEKRWTATKV

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Crispr_ID: NZ_CP053452_21

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053452_21

4485190-4485275

Orphan

Consensus_repeat	Method
GGTCGTTCTGCCGAGATCGGACCCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP053452_21

>merge|NZ_CP053452|21|4485190-4485275|CRISPRCasFinder
GGTCGTTCTGCCGAGATCGGACCCGCACACGACCTTTCCGAAGGTCGATCCGAAGGGGCCGGTCGTTCTGCCGAAATCGGACCCGC

>NZ_CP053452|21|21|4485190-4485275|CRISPRCasFinder
GGTCGTTCTGCCGAGATCGGACCCGC	ACACGACCTTTCCGAAGGTCGATCCGAAGGGGCC
GGTCGTTCTGCCGAAATCGGACCCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053452.1\|WP_171472148.1\|4485492_4485747_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171472140.1\|4474551_4475103_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171472150.1\|4486494_4487094_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274357
NZ_CP053452.1\|WP_171472144.1\|4477815_4478385_-\|3-isopropylmalate-dehydratase	unknown	unknown	gnl\|CDD\|177701
NZ_CP053452.1\|WP_171472145.1\|4478748_4480722_+\|sigma-54-interacting-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225114
NZ_CP053452.1\|WP_171472155.1\|4494624_4495002_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237030
NZ_CP053452.1\|WP_171472146.1\|4481050_4483216_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|239264
NZ_CP053452.1\|WP_171472152.1\|4490474_4491377_+\|HEAT-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|293787
NZ_CP053452.1\|WP_171472141.1\|4474991_4476089_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|239264
NZ_CP053452.1\|WP_171472138.1\|4473254_4473449_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171472156.1\|4495118_4498649_-\|protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP053452.1\|WP_171472153.1\|4491406_4493020_-\|aldehyde-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|143417
NZ_CP053452.1\|WP_171472137.1\|4472492_4473086_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171472143.1\|4476778_4477774_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171472149.1\|4485964_4486276_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274311
NZ_CP053452.1\|WP_171472154.1\|4493075_4494326_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223021
NZ_CP053452.1\|WP_171472151.1\|4489358_4490303_+\|prolyl-oligopeptidase-family-serine-peptidase	unknown	unknown	gnl\|CDD\|224423
NZ_CP053452.1\|WP_171476087.1\|4487339_4489052_+\|SMP-30/gluconolactonase/LRE-family-protein	unknown	unknown	gnl\|CDD\|369882
NZ_CP053452.1\|WP_171472139.1\|4473541_4474378_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171472142.1\|4476239_4476731_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP053452.1\|WP_171472155.1\|4494624_4495002_+\|hypothetical-protein	gnl\|CDD\|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	6.20308e-11
NZ_CP053452.1\|WP_171472153.1\|4491406_4493020_-\|aldehyde-dehydrogenase-family-protein	gnl\|CDD\|143417	cd07099, ALDH_DDALDH, Methylomonas sp. 4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid.	5.69313e-107
NZ_CP053452.1\|WP_171472150.1\|4486494_4487094_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	7.02511e-10
NZ_CP053452.1\|WP_171472144.1\|4477815_4478385_-\|3-isopropylmalate-dehydratase	gnl\|CDD\|177701	PLN00072, PLN00072, 3-isopropylmalate isomerase/dehydratase small subunit; Provisional.	9.25208e-73
NZ_CP053452.1\|WP_171472145.1\|4478748_4480722_+\|sigma-54-interacting-transcriptional-regulator	gnl\|CDD\|225114	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms].	3.05021e-119
NZ_CP053452.1\|WP_171472146.1\|4481050_4483216_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|239264	cd02966, TlpA_like_family, TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.	1.63e-28
NZ_CP053452.1\|WP_171472152.1\|4490474_4491377_+\|HEAT-repeat-domain-containing-protein	gnl\|CDD\|293787	sd00044, HEAT, HEAT repeats. The canonical HEAT repeat consists of two helices forming a helical hairpin. HEAT repeats are found in a diverse family of proteins, including the four proteins from which its name is based: Huntingtin, Elongation factor 3, the PR65/A subunit of protein phosphatase 2A (PP2A), and the lipid kinase TOR (target of rapamycin). The HEAT repeat family is related to armadillo (ARM)/beta-catenin-like repeats.	1.54337e-13
NZ_CP053452.1\|WP_171472141.1\|4474991_4476089_+\|hypothetical-protein	gnl\|CDD\|239264	cd02966, TlpA_like_family, TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.	1.4671e-08
NZ_CP053452.1\|WP_171472156.1\|4495118_4498649_-\|protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	4.06578e-94
NZ_CP053452.1\|WP_171472154.1\|4493075_4494326_-\|hypothetical-protein	gnl\|CDD\|223021	PHA03247, PHA03247, large tegument protein UL36; Provisional.	2.33745e-09
NZ_CP053452.1\|WP_171472149.1\|4485964_4486276_-\|hypothetical-protein	gnl\|CDD\|274311	TIGR02813, omega-3_polyunsaturated_fatty_acid_synthase_PfaA, polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.	0.000389846
NZ_CP053452.1\|WP_171472151.1\|4489358_4490303_+\|prolyl-oligopeptidase-family-serine-peptidase	gnl\|CDD\|224423	COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism].	4.48809e-19
NZ_CP053452.1\|WP_171476087.1\|4487339_4489052_+\|SMP-30/gluconolactonase/LRE-family-protein	gnl\|CDD\|369882	pfam08450, SGL, SMP-30/Gluconolaconase/LRE-like region. This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30), gluconolactonase and luciferin-regenerating enzyme (LRE). SMP-30 is known to hydrolyze diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 and LRE.	1.23617e-26

>NZ_CP053452.1|WP_171472146.1|4481050_4483216_-|sigma-70-family-RNA-polymerase-sigma-factor
MDRTASETAAHCLRAARAALAGGGATDADLLDRFVRFRDESAFELLVWRHRRLILGVCRRALRHEQDAEDAFQATFLVLARKAGTVGRGESLAGWLHTVAARVARAARAAASRRASRERPGVDLSTVPDRGADAPDLVPPGLLTILDNEIAGLPRKHREPLVLCYLEGMTYRQAADRLAVPVGTLSARLAKAKAQLQARLTRRGVGLPAAALALFPWGSARGAESEFVHLTARAAKASASEGRSSVVASPYACQLAERVIQVMYLTKLKIVAASVLAVFVLVGGAFGLAPGRTGEDGKSPRPAAAPDKGSATLRGTWTQTVIDEVTVGGKPQPPKERTITFVITDDRIKVLDDEGFVEDEMTYKLDPTASPAGIDLTSQTLGAFPGVYRLDGERLRIVYNGARGGSRPAEVPAEGAVRPFGLIERDLKRVSAEPKSVAQRFANAPGCFWMLPPARLTSFSTNGFVLLYEKDADGAAILTLAAAAATDPQSRAPEYRPVLFDAKQQRFVPVVVTGGSSSGRRDGATVVLYRWRMDPKVLPADKVARVGVEQLTAEAHRAAARDAEERARKRGVEVFPYPEVGKAYVFAVKTSDGKTVASKDLKGKVVVIDWWASWCGPCVRLLPEVKNLYEKRRGEGLEVVGVNLDRDPETATKASRRLGVEWPQVLVPDDEAGRELWLTAVGTESIPLVLVLDRKGVLRAINPQDLKATVGKLLDEEPKDK
>NZ_CP053452.1|WP_171472145.1|4478748_4480722_+|sigma-54-interacting-transcriptional-regulator
MRARLTLEGGDCVPSSLDLSPTGQPVTLGRSRDNTIVLRDELASRLHAKIYFEDGRWHVRDFGLNGTRVDGQRVNGSIELADGQRVRIGEVVLKIVLEPKTPPRPVKDAPATMPVNAKTEGPHNATKVHEIPPERQAPGDPPPEQAAKQLRVDELTALCKFMTGAVEAKTPHDLTTFALRAILNQTAAKLAGYLSLDPEDPGPKIVMPESAAIDVPLSRRLTVQAQAQGKTIWLFPELSASHPPTDSLSAFADAICIPLKASGEPFATLHVYRSGRAFSERDVRFIEAVAGFLAHGLEILRTRRTLEAENSRLRTHTPAADDIIGGSNAVILLRQQILRAAPQPFTVLVQGESGSGKELVALALHRNSRRTEGPLVVVNCAAIAPTLLEAELFGYKKGAFSGADRDHPGLFQQADEGTLFLDEVGELSLECQAKLLRVIEGKAFRPVGATGDMKVDVRIVAATHRDLDKDAKSGRFRQDLLFRLKVIQIRVPPLREHPEDIPELAAFFLAKVSSECRRNFKLTAAAMRKLQAHTWPGNVRQLRAAIESAAVMSESDTLDADALPLTGVTELQTPVAVPAVSVDLPPSLDIVEIEKWAICRAMRQTGGNVSHAAKLLNMSRDTLHNKLKKLKEEGIDRAMLTNTPAPLGVPEPVSTDA
>NZ_CP053452.1|WP_171472144.1|4477815_4478385_-|3-isopropylmalate-dehydratase
MQTRIEGVAYVLGDNIDTDQIIPAHYLTFNPSIPAEYKMFGKYALSGVPDDAAGLPKGHVPFHSPGGDEFVSPYTIVIGGKNFGCGSSREHAPIALAAAGVVAVVAEFYARIFYRNSVNGGYLVPLESKERLIDRICTGDELAIDIVAGTLTNTTSGESFALLPLGEVAPIIEAGGLFSYAKKVGMLGV
>NZ_CP053452.1|WP_171472143.1|4476778_4477774_+|hypothetical-protein
MKTFGLTLAAAVLLPLAGCAWLKEHMGKDTNADRTGKGLLPKDVQPEKFVSYLNEHAARLRSIAFADVRVTAQDRSGVVPSPPITLSTGDLFASQPRNFCLRARSGGIIDAKVLLGSNNEEFWVYAKVPTVDPMYYFASHTDFAEGRAKLPGGIPFEPEWVLQTLGMITLPLSDGQPELPPGAPTVAPANRYSLKLDKHTYTLSWPAVTPGGTAVIKEIVFEGEPATGSKPQVKKHVIRDAKSNKIICFAEIKTAKTVPIGADPRSGALSVQYPTKMLLRWEEQKFEMELELANAKINQPLAPEEARRLYTRPNIQDVRQINLAGGELPFK
>NZ_CP053452.1|WP_171472142.1|4476239_4476731_+|hypothetical-protein
MTDYDIQGPARVCAVTGRELKPGDRFFAALTEDAGRMVRTDYAADAWPGPPQGAVAYWAGKVPAADNKPRKPVVNDDLLLDCFDRLKGSADPDGLNFRYVAALLLMRRKRFKFEDAARDDQGRDVMIVRDARGGAVHHVIDPRLTDDQIAAVQTEVFRVLGWE
>NZ_CP053452.1|WP_171472141.1|4474991_4476089_+|hypothetical-protein
MFPPRPPKTAADKPWAVASADTGRPAETWQAQGTDLVTAERCALIVMNQAHANWAAPVGGKLAWHRADAAWVARDGIAHKVHRVIKHRDGLARELAAWVEVKYELTSQTCVNGRLFDRYRRDVEFAFAAAADVAPLLPDARLHAARFEKELKKLDLYLADADNSSPYREAVLAVRRQIDAARRGEAVSPFAPAGWLSSATVPKRAAWPEPGRLAPDFTAGPFRLADARGRPVVLVFFKPGSETTDLTLAVADALHQKYGTRSDVVPLAVWGDAAAGVKDRDRRKLTVPIYDGTQAETAFGVDSVPRFVVLDGGGVVQWTFSGVGAETGHSAREQLERLLPAVAPGAPDGTIHTPAPGTAAPARRP
>NZ_CP053452.1|WP_171472140.1|4474551_4475103_+|hypothetical-protein
MNSGFLALALLGPAAPTEGLQKGDELKFVGTVEEAVDRPGNRFRRSQALVVRVLVLERTDAWTDVAVLTLLTRTDDAVTGAVAAVTGGAPEKAHPPGVRLDLVRAHADGTAHVLLPVGAPPLALDAKTPARTLPVPRSTPSPRSSSACSRPGRRRPPRTSRGRSRPPTRAGRPKRGRRRAPTW
>NZ_CP053452.1|WP_171472139.1|4473541_4474378_-|hypothetical-protein
MVLFLVFLMLMLALFALFLGGGLVAQGYLYQNPAERMPLRALAAAVLVAGFMTLWVRIDQRAPGRYDTFFNFTPSSTVEFQEFEAVRWTGAGDKLKLDAGGNPVETTVKFKRAVGGKSGPFLEAGTGEPFKLNGSTTSGTQYMTGAIRVKAADDPEPVRYKVTLKEDPRTKTKTYKPDSKFEEEKGSRYVDAHQMGTLVVPSTGTVVLALLLNFMLMAVWLVAIWPVLRFSLGHAVVFAGALGLITMLAVMPVLFRHVRESKPPAPAAALTRPAVTRV
>NZ_CP053452.1|WP_171472138.1|4473254_4473449_-|hypothetical-protein
MRYVLFAAAVGLLAPPLGAAETCGFGTKLDFVDSPKGAAAIAKKEQKLVLVLHVSGHFEDPGLT
>NZ_CP053452.1|WP_171472137.1|4472492_4473086_-|hypothetical-protein
MLHCVAGPVDAPTFLREAKWVVETTKTCMKESKNDGAKFKELFRKAHAEKLRQEFGIVVEAVTYDPPEAMDPKDALTYRDPTGRPLAPKLPPPPLDGPDVSLTAGKFEAMQKAAGAAPGNRIAADCKGRRVVVTNQSLVHQILAAHAMAPIDRVYGTVFENVLGEKISTKPVDVVKPFTWVDRDGNRLKPLPPGASK
>NZ_CP053452.1|WP_171472148.1|4485492_4485747_-|hypothetical-protein
MRTALLSLAAAAALAVSAGSADARPPAHRGGGHAVYHGAYHRHGDWGHPGYYRSYNYPPYWHGYRGWGVRPFGPTWSLRAVCGE
>NZ_CP053452.1|WP_171472149.1|4485964_4486276_-|hypothetical-protein
MKLGTLSAAVLGLVVSASAASAQQPVYPVSPGLPPVVVNQPPVVISQPPVVVAAPPVVVAPRPLVVVAPPILPVVRPVVVGYPYGFYGRPYYHGGYYHHGYHR
>NZ_CP053452.1|WP_171472150.1|4486494_4487094_-|sigma-70-family-RNA-polymerase-sigma-factor
MTQYLPSKRSSRNVMVAMVLGTALAASSAKASASTAAAAPGSKAVTDISKYCQTCWRNARLPADRWQDCTQAVFVRLLERVEAEKWGTVLVDSETAERREFLRAIDAVKKRTQRARKFATLSPELAERRPVNNVTRDDREAVAKAAAEHLSPRQRRVLELTADGWAVPDIAAELGTTVERVSDEKYKAIKKLQHTFGVA
>NZ_CP053452.1|WP_171476087.1|4487339_4489052_+|SMP-30/gluconolactonase/LRE-family-protein
MCRLLSLLFVLPAVAFAPAEEPKQPDTPKGTTFTFTFAKSKVFPGTTRNVTVYVPAQYDGKTPACVYVNQDGLPGYVPPTFDKLIAAKEMPVTVAIGVTPGEVPAANKDALPRFNRSYEYDGLGDAYARMLLNELLPEVETKTASGDRAIVLSKRGTDRAIGGASSGAIAAFTAAWERPDAFSRVFSTIGTYVSLRGGDVYPGLIRKFEPKPIRVYLQDGSKDLNIYGGDWWMANQTMDRALLFAGYEVKHSWNEGGHNGGLAAEVFPEATRWLWKDWPELPKAGQGSSQLKEILIPGEDWKLVGEGYKFTEGPATDAKGDVFFNDVGASKTYKVVGGKPVEWLADSKRGDGQRFGPDGKLYANASGESKVLAWDAEGRSTVFAGGFKGNDLVVLHSGAIYDTAPFDTPNNSKIYYISPKGEKKVVDTGLKFANGITTSPDQTLLYVSDSNTHWVYSYSIQTDGTLANKQKYYHLYARDQDDNSGADGLRCDRDGRLWVATRAGLQVCDQAGRVNAIIPTPNGNVSNLTFGGADMDVLYATCGDKVYSRKVKVKGANAFEKPIKPRRPNL
>NZ_CP053452.1|WP_171472151.1|4489358_4490303_+|prolyl-oligopeptidase-family-serine-peptidase
MHLIRFFSFGFVFVAVVAGCNQKSVTNPDGKTSLAEARKGHTTKLAKQHKANEPVPDPPAKVFRKVKYESPAGKLAAYVTPDPKGGKKHPAIVWITGGDCNTIGDVWSPAKASNDQSARQYREAGIVMMFPSLRGGNDNPGAQENFYGEVDDVLAAAEYLAKQEYVDASRIYLGGHSTGGTLALLVAEVPNKFRAVFSFGPVEDIKGYGGQFTEAVKTSDAREVELRSPGYWLNSVQCPTFVFEGDQQGNLSSLQAMAKASTSPKVKFYPVKRATHFSILAPVNTLIAQKILADTEKETKLSFTEAELNKPFGG
>NZ_CP053452.1|WP_171472152.1|4490474_4491377_+|HEAT-repeat-domain-containing-protein
MTTADDPLPALIRELRSQSPADRTRAAKDLGRLGWLAREALPALVGALQDDDAKVRESAAHAVGLMGPEALPALVEMLGHDDKYVRRNAVWALGKLGPLARPALNDLCLALKDADPRTASGAAQALGGLGADGADAVPPLAEAMRGTNIVLCRLAAKALSQIGPPALATLIAHLQHADPFIRGESALAIGWMGGTARSAVPFLARVVRGPESALVRTPGPLSKTPTAIVPPDSDTTTPPQINDSGDASADVNCRVYAAQALGRIGPAAIGALADLRDASLGAPESVRQAAEQAIRHIQGL
>NZ_CP053452.1|WP_171472153.1|4491406_4493020_-|aldehyde-dehydrogenase-family-protein
MAAFRSELTTARAVQAAWARCAVADRLRPVRALRALLVERAADICAAVRADIARPRAEVLATEVLPAAAALKYLEKRAARVLAPERVSWWDQPTWLAGCRDTIHHRPWGVVGVIGTWNYPVYLNVGQIAQALVAGNAVLWKPSENVPRTAELTDELFRAAGFPEGLLQTLPATREAGPLLAETDVDHVVFTGSDAVGRKLAARLGERLVPSTLELSGCDAMFVLADANVELAAKAAWFGLTLNRGQTCIAVRRIFVSREKWTAFGAALASLARREPMGLVTPGQHEQAGRLIEDAVKRGATELANRNGEGARVAGAPTPQPPPFREGEQPTAPCSPLQSEGNRGVSSSHSPTFLLNAAPDAAICREACFAPVAAVIPFDVLETAVEMAKQSPFGLSASIFTADVAKARELAASIPSGSVVVNDVLAPTAHPATPFGGRGASGWGVTQGAEGLLAMTVPQVVTVRGGTFRPHFDEAVNPDPATEQIVHGLIRWTHARGLSEQVRGLWQMMKGIGRTARRKAAGSDAQPTASDSTGSAR
>NZ_CP053452.1|WP_171472154.1|4493075_4494326_-|hypothetical-protein
MIRMSVVCAGCLLPVLTGCGSLRHLTGTDTATGPTANAPAPAPRPEVNPIANTAWDTFHERQPQPSSNEFHEGFLAGYTDYLNRGPAALPPTPPSSYTASKKPPAPGSDDLVSDYHHGFRYGVYAAMVGKRSGDSVASASPAKAAPAASAGKPGPDSAATVPAKLPAAVTVSKPSPDSTLSPPAATVDVRSTDSVNAAPPAVSVSKPSTDSGPSAPVVKNPAPDTHPNFNTPAVTQWNTFPLPTRAPKGADQPPANVGSSRPATESARTAPQTSSAAPRTPTESGRTVPPLPKPELPIIPPFNPDLSGAEKLVPLPVPTDPGRFPLPSPPLPAPDTKVIPLPVPSGEPRNVLPPIREPLSLPVPVVKTDLPIPLVPTPPVSGASVPTPALPTSGTPLPPILGTIPPVPFRPTIDEK
>NZ_CP053452.1|WP_171472155.1|4494624_4495002_+|hypothetical-protein
MAKAKKAVAAKPATKKVAAKPAAKKVAAKPAAKKVAAKPVATKSVATKSVAKPAAKKVAAKPVAAKPTTKKAAPAASKVTKKPATKKKPVAKAPAAPAPEPAAAPAPAPEPAPAAPEAPPAAPPA
>NZ_CP053452.1|WP_171472156.1|4495118_4498649_-|protein-kinase
MPDCPDDTELAGFLNESLPTERLEPVSGHVDGCPRCQARLDRLTEQTSGAVARYKELQPSALPDSRSGATASPDADTQILGARNPLAALAHAELPTVPGFDVAAEIGRGGMGVVYRARHRRLNRLVALKMILAGTAADPRVVQRFMIEAEVLARIQHPQVVQVFEVGTYQGPSGVPIPYLAMELLEGGSLGRKLRERNTAPGPRWPAPRAAAELIEGLARAVHAAHLRGVIHRDLKPGNILFSAEPGTASAEPNPRAGPVPRSAPRAPGSALPKVLDFGLAKFTRDAGADLTQSGQVVGTPQYMAPEQAAGGKDLGPAADVYALGAILYECLAGRPPFTGAEPISVLLKVVSERPPDVRALRPEVPRDLAAVTMKCLEKDPGRRYASAEALADDLRLFLDDRPTLARPVTNRERAWLWAKRNPVVAGLIAALGVVLVAAFVTVASLWVKAERTARDERDAKTEALRAQERADGETKRAAESLREVQRQKARLEFDRAVRSCEEGRVRDGLAQFLRTAELAEETGQADLARVARVNLAAWPHELPPAPRAFPHADQPRAVAFLPDGRLVAAGRSGDLCLWNTATGERVPYRSDSRLIDVLGRSLGVTYWTVAVSPDGRTLAAGASDGLVTLWDVGSPVPRRSFRVSNEDAWAVGFSSDTVLWSNDGANGLKRWDLAAGPAPTVTALAPNSKFDGDTVQTLAVSRDGKRVYTGDRAARVREWDTETAAVAHTWPFRGWGAKVALVRSWALRGWITDVVVSPDGKRLAATGTDGTVWVIDLTTGAVVLELSLAGAYGNGVAFAPNRPLLVATDGDGNARLWRLDTGQAVGVPLRLPGEVTRPRFRPDSDEFAVPAGTAVYLSGAREVPGALLSAGRGLRVRGLDFSPTGDRLVAADDSGSYELFDPRTGARLQYVPKVGRSPLVVRYDPVRARVFAGTRAGVEWLAAPDFRRTNIVRLSDTLGRVHRIECRSAGVYAMGATQVGRFDPAAFEPPKLSGPIEGVREGVVLNTMSVRPDGREVLVSFGDRVVVLDAVTLKPLREWRVGDGLLDARYMPDGKNVFVARRDNVAELLDATTGAPTAARPMPHTRAVTGVDVAARGTVLLTGSRDGTARFWDAATGLPLGAPLRHPGPVTYVAATRDGDRVAAGTDTGHVMVWDLPPAPAAGTIDALRAELKKK

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Crispr_ID: NZ_CP053452_22

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053452_22

4489107-4489187

Orphan

Consensus_repeat	Method
GTAAGCCCCCCGAGGAAACGAGGAGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP053452_22

>merge|NZ_CP053452|22|4489107-4489187|CRISPRCasFinder
GTAAGCCCCCCGAGGAAACGAGGAGCTGTGAAGACGCGGGAGTCACAGACGCCCGGTAAGCCCCCCGAGGAAACGAAGAGC

>NZ_CP053452|22|22|4489107-4489187|CRISPRCasFinder
GTAAGCCCCCCGAGGAAACGAGGAGC	TGTGAAGACGCGGGAGTCACAGACGCCCG
GTAAGCCCCCCGAGGAAACGAAGAGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053452.1\|WP_171472155.1\|4494624_4495002_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237030
NZ_CP053452.1\|WP_171472160.1\|4502354_4502717_-\|carboxypeptidase-regulatory-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|379297
NZ_CP053452.1\|WP_171472153.1\|4491406_4493020_-\|aldehyde-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|143417
NZ_CP053452.1\|WP_171472150.1\|4486494_4487094_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274357
NZ_CP053452.1\|WP_171472144.1\|4477815_4478385_-\|3-isopropylmalate-dehydratase	unknown	unknown	gnl\|CDD\|177701
NZ_CP053452.1\|WP_171472145.1\|4478748_4480722_+\|sigma-54-interacting-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225114
NZ_CP053452.1\|WP_171472146.1\|4481050_4483216_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|239264
NZ_CP053452.1\|WP_171472152.1\|4490474_4491377_+\|HEAT-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|293787
NZ_CP053452.1\|WP_171472148.1\|4485492_4485747_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171472156.1\|4495118_4498649_-\|protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP053452.1\|WP_171472154.1\|4493075_4494326_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223021
NZ_CP053452.1\|WP_171472158.1\|4499611_4500988_+\|DUF1501-domain-containing-protein	unknown	unknown	gnl\|CDD\|369346
NZ_CP053452.1\|WP_171472143.1\|4476778_4477774_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171472159.1\|4501120_4502179_-\|transaldolase	unknown	unknown	gnl\|CDD\|188642
NZ_CP053452.1\|WP_171472149.1\|4485964_4486276_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274311
NZ_CP053452.1\|WP_171472157.1\|4498728_4499340_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274357
NZ_CP053452.1\|WP_171472151.1\|4489358_4490303_+\|prolyl-oligopeptidase-family-serine-peptidase	unknown	unknown	gnl\|CDD\|224423
NZ_CP053452.1\|WP_171476087.1\|4487339_4489052_+\|SMP-30/gluconolactonase/LRE-family-protein	unknown	unknown	gnl\|CDD\|369882
NZ_CP053452.1\|WP_171472142.1\|4476239_4476731_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171472147.1\|4483588_4485433_+\|YXWGXW-repeat-containing-protein	unknown	unknown	gnl\|CDD\|237057

Protein	Function_ID	Function_description	E-value
NZ_CP053452.1\|WP_171472160.1\|4502354_4502717_-\|carboxypeptidase-regulatory-like-domain-containing-protein	gnl\|CDD\|379297	pfam13620, CarboxypepD_reg, Carboxypeptidase regulatory-like domain.	6.34565e-05
NZ_CP053452.1\|WP_171472153.1\|4491406_4493020_-\|aldehyde-dehydrogenase-family-protein	gnl\|CDD\|143417	cd07099, ALDH_DDALDH, Methylomonas sp. 4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid.	5.69313e-107
NZ_CP053452.1\|WP_171472150.1\|4486494_4487094_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	7.02511e-10
NZ_CP053452.1\|WP_171472144.1\|4477815_4478385_-\|3-isopropylmalate-dehydratase	gnl\|CDD\|177701	PLN00072, PLN00072, 3-isopropylmalate isomerase/dehydratase small subunit; Provisional.	9.25208e-73
NZ_CP053452.1\|WP_171472145.1\|4478748_4480722_+\|sigma-54-interacting-transcriptional-regulator	gnl\|CDD\|225114	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms].	3.05021e-119
NZ_CP053452.1\|WP_171472146.1\|4481050_4483216_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|239264	cd02966, TlpA_like_family, TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.	1.63e-28
NZ_CP053452.1\|WP_171472152.1\|4490474_4491377_+\|HEAT-repeat-domain-containing-protein	gnl\|CDD\|293787	sd00044, HEAT, HEAT repeats. The canonical HEAT repeat consists of two helices forming a helical hairpin. HEAT repeats are found in a diverse family of proteins, including the four proteins from which its name is based: Huntingtin, Elongation factor 3, the PR65/A subunit of protein phosphatase 2A (PP2A), and the lipid kinase TOR (target of rapamycin). The HEAT repeat family is related to armadillo (ARM)/beta-catenin-like repeats.	1.54337e-13
NZ_CP053452.1\|WP_171472155.1\|4494624_4495002_+\|hypothetical-protein	gnl\|CDD\|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	6.20308e-11
NZ_CP053452.1\|WP_171472156.1\|4495118_4498649_-\|protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	4.06578e-94
NZ_CP053452.1\|WP_171472154.1\|4493075_4494326_-\|hypothetical-protein	gnl\|CDD\|223021	PHA03247, PHA03247, large tegument protein UL36; Provisional.	2.33745e-09
NZ_CP053452.1\|WP_171472159.1\|4501120_4502179_-\|transaldolase	gnl\|CDD\|188642	cd00955, Transaldolase_like, Transaldolase-like proteins from plants and bacteria. Transaldolase-like proteins from plants and bacteria. Transaldolase is found in the non-oxidative branch of the pentose phosphate pathway, that catalyze the reversible transfer of a dihydroxyacetone group from fructose-6-phosphate to erythrose-4-phosphate yielding sedoheptulose-7-phosphate and glyceraldehyde-3-phosphate. They are members of the class I aldolases, who are characterized by using a Schiff-base mechanism for stabilization of the reaction intermediates.	2.01895e-84
NZ_CP053452.1\|WP_171472149.1\|4485964_4486276_-\|hypothetical-protein	gnl\|CDD\|274311	TIGR02813, omega-3_polyunsaturated_fatty_acid_synthase_PfaA, polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.	0.000389846
NZ_CP053452.1\|WP_171472157.1\|4498728_4499340_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	6.58234e-16
NZ_CP053452.1\|WP_171472151.1\|4489358_4490303_+\|prolyl-oligopeptidase-family-serine-peptidase	gnl\|CDD\|224423	COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism].	4.48809e-19
NZ_CP053452.1\|WP_171476087.1\|4487339_4489052_+\|SMP-30/gluconolactonase/LRE-family-protein	gnl\|CDD\|369882	pfam08450, SGL, SMP-30/Gluconolaconase/LRE-like region. This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30), gluconolactonase and luciferin-regenerating enzyme (LRE). SMP-30 is known to hydrolyze diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 and LRE.	1.23617e-26
NZ_CP053452.1\|WP_171472158.1\|4499611_4500988_+\|DUF1501-domain-containing-protein	gnl\|CDD\|369346	pfam07394, DUF1501, Protein of unknown function (DUF1501). This family contains a number of hypothetical bacterial proteins of unknown function approximately 400 residues long.	3.22044e-96
NZ_CP053452.1\|WP_171472147.1\|4483588_4485433_+\|YXWGXW-repeat-containing-protein	gnl\|CDD\|237057	PRK12323, PRK12323, DNA polymerase III subunit gamma/tau.	0.000170151

>NZ_CP053452.1|WP_171476087.1|4487339_4489052_+|SMP-30/gluconolactonase/LRE-family-protein
MCRLLSLLFVLPAVAFAPAEEPKQPDTPKGTTFTFTFAKSKVFPGTTRNVTVYVPAQYDGKTPACVYVNQDGLPGYVPPTFDKLIAAKEMPVTVAIGVTPGEVPAANKDALPRFNRSYEYDGLGDAYARMLLNELLPEVETKTASGDRAIVLSKRGTDRAIGGASSGAIAAFTAAWERPDAFSRVFSTIGTYVSLRGGDVYPGLIRKFEPKPIRVYLQDGSKDLNIYGGDWWMANQTMDRALLFAGYEVKHSWNEGGHNGGLAAEVFPEATRWLWKDWPELPKAGQGSSQLKEILIPGEDWKLVGEGYKFTEGPATDAKGDVFFNDVGASKTYKVVGGKPVEWLADSKRGDGQRFGPDGKLYANASGESKVLAWDAEGRSTVFAGGFKGNDLVVLHSGAIYDTAPFDTPNNSKIYYISPKGEKKVVDTGLKFANGITTSPDQTLLYVSDSNTHWVYSYSIQTDGTLANKQKYYHLYARDQDDNSGADGLRCDRDGRLWVATRAGLQVCDQAGRVNAIIPTPNGNVSNLTFGGADMDVLYATCGDKVYSRKVKVKGANAFEKPIKPRRPNL
>NZ_CP053452.1|WP_171472150.1|4486494_4487094_-|sigma-70-family-RNA-polymerase-sigma-factor
MTQYLPSKRSSRNVMVAMVLGTALAASSAKASASTAAAAPGSKAVTDISKYCQTCWRNARLPADRWQDCTQAVFVRLLERVEAEKWGTVLVDSETAERREFLRAIDAVKKRTQRARKFATLSPELAERRPVNNVTRDDREAVAKAAAEHLSPRQRRVLELTADGWAVPDIAAELGTTVERVSDEKYKAIKKLQHTFGVA
>NZ_CP053452.1|WP_171472149.1|4485964_4486276_-|hypothetical-protein
MKLGTLSAAVLGLVVSASAASAQQPVYPVSPGLPPVVVNQPPVVISQPPVVVAAPPVVVAPRPLVVVAPPILPVVRPVVVGYPYGFYGRPYYHGGYYHHGYHR
>NZ_CP053452.1|WP_171472148.1|4485492_4485747_-|hypothetical-protein
MRTALLSLAAAAALAVSAGSADARPPAHRGGGHAVYHGAYHRHGDWGHPGYYRSYNYPPYWHGYRGWGVRPFGPTWSLRAVCGE
>NZ_CP053452.1|WP_171472147.1|4483588_4485433_+|YXWGXW-repeat-containing-protein
MPERLRKVLPLCAIGSLLAILVAGFGAAQEPIPLKQPDPVPAPLPVPGQPAQGDGPEVLAKGPVHEAFAATAEAPAATPIVAKQPPDPIEELPPDQKPEGDNVQWIPGYWHWDEESSRFIWISGFWRQPPPGRVWVPGSWREARGGWQWVPGFWQPVAAPKPQQPQQQPEIEYLNEPPVSVEVGPTVAAPTATCFYVPGSWVWRGRYVWRPGVWVEYRPTWVWVPARFQWTPAGYVFVEGYWDYPLGTRGVMFAPVAFPQAVYAQPGFVYTPVYVVSEPCMVGALFVRRGHACYYFGDYYDGAYATAGYTAWCGTYTRTGFTIGFGVGRSWGYDPLWSYYSVTYRDTPGWHRGVGDLYGGRYRGEIARPPVTLVQQNTTINNITKTTVVNVTNNVTVVNGATIVNNKDVSHVAMVAPLKVAPDLQRTKYQPVTVEARRAAAVTAKQFNEVSVQRSRQETALVAQAAARPMGLVGPAAPVQPRTVKLDVPRTAVTQAHVIDERKAPPPAPHQAGSAAHPKVDLPHTEVPRVDRGQVVLPRSDPHTTFPKVDPKGPVVLPKSDPRPDPAKIDPKGPPTTFPKIDPKGPLPKLPAPLPKGPQALPPKEHSKSEPSKP
>NZ_CP053452.1|WP_171472146.1|4481050_4483216_-|sigma-70-family-RNA-polymerase-sigma-factor
MDRTASETAAHCLRAARAALAGGGATDADLLDRFVRFRDESAFELLVWRHRRLILGVCRRALRHEQDAEDAFQATFLVLARKAGTVGRGESLAGWLHTVAARVARAARAAASRRASRERPGVDLSTVPDRGADAPDLVPPGLLTILDNEIAGLPRKHREPLVLCYLEGMTYRQAADRLAVPVGTLSARLAKAKAQLQARLTRRGVGLPAAALALFPWGSARGAESEFVHLTARAAKASASEGRSSVVASPYACQLAERVIQVMYLTKLKIVAASVLAVFVLVGGAFGLAPGRTGEDGKSPRPAAAPDKGSATLRGTWTQTVIDEVTVGGKPQPPKERTITFVITDDRIKVLDDEGFVEDEMTYKLDPTASPAGIDLTSQTLGAFPGVYRLDGERLRIVYNGARGGSRPAEVPAEGAVRPFGLIERDLKRVSAEPKSVAQRFANAPGCFWMLPPARLTSFSTNGFVLLYEKDADGAAILTLAAAAATDPQSRAPEYRPVLFDAKQQRFVPVVVTGGSSSGRRDGATVVLYRWRMDPKVLPADKVARVGVEQLTAEAHRAAARDAEERARKRGVEVFPYPEVGKAYVFAVKTSDGKTVASKDLKGKVVVIDWWASWCGPCVRLLPEVKNLYEKRRGEGLEVVGVNLDRDPETATKASRRLGVEWPQVLVPDDEAGRELWLTAVGTESIPLVLVLDRKGVLRAINPQDLKATVGKLLDEEPKDK
>NZ_CP053452.1|WP_171472145.1|4478748_4480722_+|sigma-54-interacting-transcriptional-regulator
MRARLTLEGGDCVPSSLDLSPTGQPVTLGRSRDNTIVLRDELASRLHAKIYFEDGRWHVRDFGLNGTRVDGQRVNGSIELADGQRVRIGEVVLKIVLEPKTPPRPVKDAPATMPVNAKTEGPHNATKVHEIPPERQAPGDPPPEQAAKQLRVDELTALCKFMTGAVEAKTPHDLTTFALRAILNQTAAKLAGYLSLDPEDPGPKIVMPESAAIDVPLSRRLTVQAQAQGKTIWLFPELSASHPPTDSLSAFADAICIPLKASGEPFATLHVYRSGRAFSERDVRFIEAVAGFLAHGLEILRTRRTLEAENSRLRTHTPAADDIIGGSNAVILLRQQILRAAPQPFTVLVQGESGSGKELVALALHRNSRRTEGPLVVVNCAAIAPTLLEAELFGYKKGAFSGADRDHPGLFQQADEGTLFLDEVGELSLECQAKLLRVIEGKAFRPVGATGDMKVDVRIVAATHRDLDKDAKSGRFRQDLLFRLKVIQIRVPPLREHPEDIPELAAFFLAKVSSECRRNFKLTAAAMRKLQAHTWPGNVRQLRAAIESAAVMSESDTLDADALPLTGVTELQTPVAVPAVSVDLPPSLDIVEIEKWAICRAMRQTGGNVSHAAKLLNMSRDTLHNKLKKLKEEGIDRAMLTNTPAPLGVPEPVSTDA
>NZ_CP053452.1|WP_171472144.1|4477815_4478385_-|3-isopropylmalate-dehydratase
MQTRIEGVAYVLGDNIDTDQIIPAHYLTFNPSIPAEYKMFGKYALSGVPDDAAGLPKGHVPFHSPGGDEFVSPYTIVIGGKNFGCGSSREHAPIALAAAGVVAVVAEFYARIFYRNSVNGGYLVPLESKERLIDRICTGDELAIDIVAGTLTNTTSGESFALLPLGEVAPIIEAGGLFSYAKKVGMLGV
>NZ_CP053452.1|WP_171472143.1|4476778_4477774_+|hypothetical-protein
MKTFGLTLAAAVLLPLAGCAWLKEHMGKDTNADRTGKGLLPKDVQPEKFVSYLNEHAARLRSIAFADVRVTAQDRSGVVPSPPITLSTGDLFASQPRNFCLRARSGGIIDAKVLLGSNNEEFWVYAKVPTVDPMYYFASHTDFAEGRAKLPGGIPFEPEWVLQTLGMITLPLSDGQPELPPGAPTVAPANRYSLKLDKHTYTLSWPAVTPGGTAVIKEIVFEGEPATGSKPQVKKHVIRDAKSNKIICFAEIKTAKTVPIGADPRSGALSVQYPTKMLLRWEEQKFEMELELANAKINQPLAPEEARRLYTRPNIQDVRQINLAGGELPFK
>NZ_CP053452.1|WP_171472142.1|4476239_4476731_+|hypothetical-protein
MTDYDIQGPARVCAVTGRELKPGDRFFAALTEDAGRMVRTDYAADAWPGPPQGAVAYWAGKVPAADNKPRKPVVNDDLLLDCFDRLKGSADPDGLNFRYVAALLLMRRKRFKFEDAARDDQGRDVMIVRDARGGAVHHVIDPRLTDDQIAAVQTEVFRVLGWE
>NZ_CP053452.1|WP_171472151.1|4489358_4490303_+|prolyl-oligopeptidase-family-serine-peptidase
MHLIRFFSFGFVFVAVVAGCNQKSVTNPDGKTSLAEARKGHTTKLAKQHKANEPVPDPPAKVFRKVKYESPAGKLAAYVTPDPKGGKKHPAIVWITGGDCNTIGDVWSPAKASNDQSARQYREAGIVMMFPSLRGGNDNPGAQENFYGEVDDVLAAAEYLAKQEYVDASRIYLGGHSTGGTLALLVAEVPNKFRAVFSFGPVEDIKGYGGQFTEAVKTSDAREVELRSPGYWLNSVQCPTFVFEGDQQGNLSSLQAMAKASTSPKVKFYPVKRATHFSILAPVNTLIAQKILADTEKETKLSFTEAELNKPFGG
>NZ_CP053452.1|WP_171472152.1|4490474_4491377_+|HEAT-repeat-domain-containing-protein
MTTADDPLPALIRELRSQSPADRTRAAKDLGRLGWLAREALPALVGALQDDDAKVRESAAHAVGLMGPEALPALVEMLGHDDKYVRRNAVWALGKLGPLARPALNDLCLALKDADPRTASGAAQALGGLGADGADAVPPLAEAMRGTNIVLCRLAAKALSQIGPPALATLIAHLQHADPFIRGESALAIGWMGGTARSAVPFLARVVRGPESALVRTPGPLSKTPTAIVPPDSDTTTPPQINDSGDASADVNCRVYAAQALGRIGPAAIGALADLRDASLGAPESVRQAAEQAIRHIQGL
>NZ_CP053452.1|WP_171472153.1|4491406_4493020_-|aldehyde-dehydrogenase-family-protein
MAAFRSELTTARAVQAAWARCAVADRLRPVRALRALLVERAADICAAVRADIARPRAEVLATEVLPAAAALKYLEKRAARVLAPERVSWWDQPTWLAGCRDTIHHRPWGVVGVIGTWNYPVYLNVGQIAQALVAGNAVLWKPSENVPRTAELTDELFRAAGFPEGLLQTLPATREAGPLLAETDVDHVVFTGSDAVGRKLAARLGERLVPSTLELSGCDAMFVLADANVELAAKAAWFGLTLNRGQTCIAVRRIFVSREKWTAFGAALASLARREPMGLVTPGQHEQAGRLIEDAVKRGATELANRNGEGARVAGAPTPQPPPFREGEQPTAPCSPLQSEGNRGVSSSHSPTFLLNAAPDAAICREACFAPVAAVIPFDVLETAVEMAKQSPFGLSASIFTADVAKARELAASIPSGSVVVNDVLAPTAHPATPFGGRGASGWGVTQGAEGLLAMTVPQVVTVRGGTFRPHFDEAVNPDPATEQIVHGLIRWTHARGLSEQVRGLWQMMKGIGRTARRKAAGSDAQPTASDSTGSAR
>NZ_CP053452.1|WP_171472154.1|4493075_4494326_-|hypothetical-protein
MIRMSVVCAGCLLPVLTGCGSLRHLTGTDTATGPTANAPAPAPRPEVNPIANTAWDTFHERQPQPSSNEFHEGFLAGYTDYLNRGPAALPPTPPSSYTASKKPPAPGSDDLVSDYHHGFRYGVYAAMVGKRSGDSVASASPAKAAPAASAGKPGPDSAATVPAKLPAAVTVSKPSPDSTLSPPAATVDVRSTDSVNAAPPAVSVSKPSTDSGPSAPVVKNPAPDTHPNFNTPAVTQWNTFPLPTRAPKGADQPPANVGSSRPATESARTAPQTSSAAPRTPTESGRTVPPLPKPELPIIPPFNPDLSGAEKLVPLPVPTDPGRFPLPSPPLPAPDTKVIPLPVPSGEPRNVLPPIREPLSLPVPVVKTDLPIPLVPTPPVSGASVPTPALPTSGTPLPPILGTIPPVPFRPTIDEK
>NZ_CP053452.1|WP_171472155.1|4494624_4495002_+|hypothetical-protein
MAKAKKAVAAKPATKKVAAKPAAKKVAAKPAAKKVAAKPVATKSVATKSVAKPAAKKVAAKPVAAKPTTKKAAPAASKVTKKPATKKKPVAKAPAAPAPEPAAAPAPAPEPAPAAPEAPPAAPPA
>NZ_CP053452.1|WP_171472156.1|4495118_4498649_-|protein-kinase
MPDCPDDTELAGFLNESLPTERLEPVSGHVDGCPRCQARLDRLTEQTSGAVARYKELQPSALPDSRSGATASPDADTQILGARNPLAALAHAELPTVPGFDVAAEIGRGGMGVVYRARHRRLNRLVALKMILAGTAADPRVVQRFMIEAEVLARIQHPQVVQVFEVGTYQGPSGVPIPYLAMELLEGGSLGRKLRERNTAPGPRWPAPRAAAELIEGLARAVHAAHLRGVIHRDLKPGNILFSAEPGTASAEPNPRAGPVPRSAPRAPGSALPKVLDFGLAKFTRDAGADLTQSGQVVGTPQYMAPEQAAGGKDLGPAADVYALGAILYECLAGRPPFTGAEPISVLLKVVSERPPDVRALRPEVPRDLAAVTMKCLEKDPGRRYASAEALADDLRLFLDDRPTLARPVTNRERAWLWAKRNPVVAGLIAALGVVLVAAFVTVASLWVKAERTARDERDAKTEALRAQERADGETKRAAESLREVQRQKARLEFDRAVRSCEEGRVRDGLAQFLRTAELAEETGQADLARVARVNLAAWPHELPPAPRAFPHADQPRAVAFLPDGRLVAAGRSGDLCLWNTATGERVPYRSDSRLIDVLGRSLGVTYWTVAVSPDGRTLAAGASDGLVTLWDVGSPVPRRSFRVSNEDAWAVGFSSDTVLWSNDGANGLKRWDLAAGPAPTVTALAPNSKFDGDTVQTLAVSRDGKRVYTGDRAARVREWDTETAAVAHTWPFRGWGAKVALVRSWALRGWITDVVVSPDGKRLAATGTDGTVWVIDLTTGAVVLELSLAGAYGNGVAFAPNRPLLVATDGDGNARLWRLDTGQAVGVPLRLPGEVTRPRFRPDSDEFAVPAGTAVYLSGAREVPGALLSAGRGLRVRGLDFSPTGDRLVAADDSGSYELFDPRTGARLQYVPKVGRSPLVVRYDPVRARVFAGTRAGVEWLAAPDFRRTNIVRLSDTLGRVHRIECRSAGVYAMGATQVGRFDPAAFEPPKLSGPIEGVREGVVLNTMSVRPDGREVLVSFGDRVVVLDAVTLKPLREWRVGDGLLDARYMPDGKNVFVARRDNVAELLDATTGAPTAARPMPHTRAVTGVDVAARGTVLLTGSRDGTARFWDAATGLPLGAPLRHPGPVTYVAATRDGDRVAAGTDTGHVMVWDLPPAPAAGTIDALRAELKKK
>NZ_CP053452.1|WP_171472157.1|4498728_4499340_-|sigma-70-family-RNA-polymerase-sigma-factor
MGADSADTTRVTLLHRLNQDPNDQLSWAEFVRVYGPTIRVWLMHWGLQDADAQDVAQNVLLRLTAKLPQFQYDPNKSFRGWLKTLTHHAWHDFVTEAGRRTRGSGDTSVLDQLQSIEAREDLTARVEATFDKELLEVALVRAKARVADTTWQAFKLVALEGVSPQAAADQLGVRVSQVYLAKHRLQKVVQEEIRAIEGAGSTE
>NZ_CP053452.1|WP_171472158.1|4499611_4500988_+|DUF1501-domain-containing-protein
MPADHVGCDEFRTTLRRPDRRAFVRAGVFGAGAVSLNGLLRTEARASGGSSQGRTNNVILLWMRGGPSHHDMWDPKPYAPVEVRGEFGVTDTNVPGIRLSDMLPLSAKMMDKWAIVRSLNHHDAGHSTGDQICFTGYNAGPAPDENVYPSIGSVVSKQLGHLSTTVPPYVMIPRLLPGAGSAYLGVAHKPFETQADPAQPGPFKLPNFKLADGVSFDQIGDRKGLLSRFDTLRRDADASGQMDAADKFQQRAWDILTSRAARDAFDLDREPAKVRERYGLIPAFDPKAADRCGAPNWAQRMLLARRLVEAGVRIVTVDLRWWDTHVKGFESLKLGFLPRWDRAYTALLEDLDSRGLLETTLVLAWGEFGRTPKVNAQAGRDHYPNVFSAAVAGGPVKGGRVVGESDSNGAFPKANPKSPQDVLATVYRHLGVDTEATYPDNGRPVPVLPHGKPIDELC
>NZ_CP053452.1|WP_171472159.1|4501120_4502179_-|transaldolase
MTPLQSLVATGTKLWLDSVDPDLIKSNREQGATGATSNPIIISDLLKTGRFDADMKAFFAQGLDDEAVAWAMTNQLVKNAQDVFADVWADTRGDDGWVSFELDPLLEDLAQTKNTAERTAEYVRLGKTWAAGHKNRMIKVPATPGGLGAIEELVASGVAVNITLIFSERQYLLARDAVYRAVQRRTDKENVKTVYSIFVSRVDVYTETHVPTLIPAAQGLVGIVNAKRIWKMNKDFWADKGLARKQEMIFASTGTKKMKDGTTPPAWKYVEALAGSDIETNPPQTNADVAKSGRTFTKQVDQLPPADVLADIDAKVDMKKLEETLMSEGLSKFADPHKALLKLIGEKRAALK
>NZ_CP053452.1|WP_171472160.1|4502354_4502717_-|carboxypeptidase-regulatory-like-domain-containing-protein
MRRTVLPLALVPVLALAAGCGAIGGLEAHPDALTGKITYNGQPVKSVALTVTGPDGKPSGGATNDEGVYTIPNPPKGTLQIQLSAPGGKAAFPVKYTKPNSGLSVAYTGGRLTHNIDLTP

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Crispr_ID: NZ_CP053452_23

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053452_23

5089777-5089878

Orphan

Consensus_repeat	Method
CAGCCCCTCCCTGAAGGGAGGGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP053452_23

>merge|NZ_CP053452|23|5089777-5089878|CRISPRCasFinder
CAGCCCCTCCCTGAAGGGAGGGGAGCAAGACCTCCGGAACGCCTGTGTTTTGAGAGAGTCGGAGGAGGCGTCGCGCCGTCACCCCCTCCCTGAAGGGAGGGG

>NZ_CP053452|23|23|5089777-5089878|CRISPRCasFinder
CAGCCCCTCCCTGAAGGGAGGGG	AGCAAGACCTCCGGAACGCCTGTGTTTTGAGAGAGTCGGAGGAGGCGTCGCGCCGT
CACCCCCTCCCTGAAGGGAGGGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053452.1\|WP_171472573.1\|5086920_5089569_+\|pre-peptidase-C-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|367843
NZ_CP053452.1\|WP_171472583.1\|5109719_5110796_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171472579.1\|5103138_5104746_-\|HEAT-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|379311
NZ_CP053452.1\|WP_171472569.1\|5083154_5083691_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171472577.1\|5096515_5099377_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|238121
NZ_CP053452.1\|WP_171472574.1\|5089944_5091438_+\|NB-ARC-domain-protein	unknown	unknown	gnl\|CDD\|238121
NZ_CP053452.1\|WP_171468900.1\|5079483_5079861_-\|IS66-family-insertion-sequence-element-accessory-protein-TnpB	unknown	unknown	gnl\|CDD\|377551
NZ_CP053452.1\|WP_171472566.1\|5080170_5080854_-\|Tad-domain-containing-protein	unknown	unknown	gnl\|CDD\|379164
NZ_CP053452.1\|WP_171472571.1\|5084521_5085757_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340866
NZ_CP053452.1\|WP_171472572.1\|5085937_5086705_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223377
NZ_CP053452.1\|WP_171472581.1\|5107154_5107922_-\|HEAT-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|379311
NZ_CP053452.1\|WP_171472578.1\|5099580_5102916_+\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|225201
NZ_CP053452.1\|WP_171472580.1\|5105045_5106968_+\|trypsin-like-peptidase-domain-containing-protein	unknown	unknown	gnl\|CDD\|379142
NZ_CP053452.1\|WP_171472568.1\|5082238_5083066_+\|metallophosphoesterase	unknown	unknown	gnl\|CDD\|163664
NZ_CP053452.1\|WP_171468866.1\|5079854_5080202_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171472576.1\|5095456_5096305_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|275032
NZ_CP053452.1\|WP_171472567.1\|5081611_5082061_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171472575.1\|5092001_5095328_+\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274357
NZ_CP053452.1\|WP_171472582.1\|5108832_5109522_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171472570.1\|5083852_5084386_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP053452.1\|WP_171472579.1\|5103138_5104746_-\|HEAT-repeat-domain-containing-protein	gnl\|CDD\|379311	pfam13646, HEAT_2, HEAT repeats. This family includes multiple HEAT repeats.	0.00018446
NZ_CP053452.1\|WP_171472574.1\|5089944_5091438_+\|NB-ARC-domain-protein	gnl\|CDD\|238121	cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment.	3.55753e-61
NZ_CP053452.1\|WP_171468900.1\|5079483_5079861_-\|IS66-family-insertion-sequence-element-accessory-protein-TnpB	gnl\|CDD\|377551	pfam05717, TnpB_IS66, IS66 Orf2 like protein. This protein is found in insertion sequences related to IS66. The function of these proteins is uncertain, but they are probably essential for transposition.	2.4029e-39
NZ_CP053452.1\|WP_171472566.1\|5080170_5080854_-\|Tad-domain-containing-protein	gnl\|CDD\|379164	pfam13400, Tad, Putative Flp pilus-assembly TadE/G-like. This is an N-terminal domain on a family of putative Flp pilus-assembly proteins. The exact function is not known. The Flp-pilus biogenesis genes include the Tad genes, and some members of this family are putatively assigned as being TadG.	5.96183e-05
NZ_CP053452.1\|WP_171472571.1\|5084521_5085757_+\|MFS-transporter	gnl\|CDD\|340866	cd06177, MFS_NHS, Nucleoside:H(+) symporter family of the Major Facilitator Superfamily of transporters. The prototypical members of the Nucleoside:H(+) symporter (NHS) family are Escherichia coli nucleoside permease NupG and xanthosine permease. Nucleoside:H(+) symporters are proton-driven transporters that facilitate the import of nucleosides across the cytoplasmic membrane. NupG is a broad-specificity transporter of purine and pyrimidine nucleosides. Xanthosine permease is involved in the uptake of xanthosine and other nucleosides such as inosine, adenosine, cytidine, uridine and thymidine. The NHS family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.226e-73
NZ_CP053452.1\|WP_171472572.1\|5085937_5086705_+\|SDR-family-oxidoreductase	gnl\|CDD\|223377	COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only].	2.59308e-92
NZ_CP053452.1\|WP_171472581.1\|5107154_5107922_-\|HEAT-repeat-domain-containing-protein	gnl\|CDD\|379311	pfam13646, HEAT_2, HEAT repeats. This family includes multiple HEAT repeats.	4.06352e-08
NZ_CP053452.1\|WP_171472578.1\|5099580_5102916_+\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|225201	COG2319, COG2319, FOG: WD40 repeat [General function prediction only].	1.27859e-44
NZ_CP053452.1\|WP_171472580.1\|5105045_5106968_+\|trypsin-like-peptidase-domain-containing-protein	gnl\|CDD\|379142	pfam13365, Trypsin_2, Trypsin-like peptidase domain. This family includes trypsin-like peptidase domains.	2.2901e-21
NZ_CP053452.1\|WP_171472568.1\|5082238_5083066_+\|metallophosphoesterase	gnl\|CDD\|163664	cd07421, MPP_Rhilphs, Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	7.44789e-13
NZ_CP053452.1\|WP_171472573.1\|5086920_5089569_+\|pre-peptidase-C-terminal-domain-containing-protein	gnl\|CDD\|367843	pfam04151, PPC, Bacterial pre-peptidase C-terminal domain. This domain is normally found at the C-terminus of secreted bacterial peptidases. They are not present in the active peptidase. It is possible that they fulfill a similar role to the PKD (pfam00801) domain, which also are found in this context. Visual analysis suggests that PKD and PPC are distantly related (personal obs:Bateman A, Yeats C).	0.00189374
NZ_CP053452.1\|WP_171472576.1\|5095456_5096305_+\|hypothetical-protein	gnl\|CDD\|275032	TIGR04179, hypothetical_protein_GM18DRAFT_2302, rhombotail lipoprotein. Members of this protein family are probable lipoproteins. Nearly every member ends with a C-terminal region consisting of a glycine-rich probable cleavage site, a hydrophobic probable transmembrane helix, and a cluster of basic residues, as described in putative protein sorting region model TIGR03501. Furthermore, members tend to be encoded next to a rhomboid family protease, called rhombosortase (TIGR03902) predicted to perform a C-terminal cleavage.	0.00149741
NZ_CP053452.1\|WP_171472577.1\|5096515_5099377_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|238121	cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment.	1.44153e-47
NZ_CP053452.1\|WP_171472575.1\|5092001_5095328_+\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	8.77031e-28

>NZ_CP053452.1|WP_171472573.1|5086920_5089569_+|pre-peptidase-C-terminal-domain-containing-protein
MRRLVFGLVLLVVCGPAVAQPPPPGLPSARVQHVFPLGVKAGTSVEVIVTGNDLEEPEKLFFSHPGIRGEYVSPPKDPTPDPKDPKKTVPPPKTNPAGPHKFKVTAAGDVPPGLYDLRFVGKWGASNPRTFAVSDQIEVAEKEPNNDVPEAQKVELGTTVSGVISAPTDVDYTSFTGKKGQRIIVSCLASSIDSKAAPMIEVFDLSGRKLAANRNYHENDALLDVILPADGDYYVRLFQFTYTVGGPDYFYRLSIGTAPWIDAVFPPVVEPGKPTAVTVYGRNLPGGQPADGVTADGRPLEKLIVTVTPPADAVGKLTSLTHVNPTTALQDGFTYALKGPGGVSNPVVIYLAGDKLTVLTAPANTPDAAAVLDGPGEVAGFLARRGDRAWVAFRAKKGEKVALNLAAERIGSNGDFFFSVRDGKDPKRDLSGEQDDDNDTLHPFGFYTRTSDPGPYTFTAPEDGKYYVMVGCRESSYLSGPKAAFRLRLGSLVPDFCAVVMPYSRFYQTGSAAWQGGTQAYHVFAHRADGYTGTLEVAAEGLPAGVTAKPLMIGPAARWGVLVLNVAPGTAPVTSAITVKVTGTDPVGKTLVRSARPASVTWGTQQPDQNIPVVSKLDQSLVLAVRGEKAPFHITADVPNATVKSGMGKEEKVNGPIIVMKQGDKASVPVRVEWATDEKPNVTLTVESMLQQQQNAPVTVGIAGQPTKDKPDVVVNLDARTNAAPGTYTVTLRGLSQVPFQKDPMAKGKGPNLPAEGFSTPITVQVIPTAVVKIAAPTLPGNTLKIGTDGELVVKVDRQHDYAGEIKLKFAPPTGVTGVTADEVTIPAGQGEAKLVLKAASGTKPGAVSNATITATAVYAGKYTITHEAKVSFTVAEEPKKK
>NZ_CP053452.1|WP_171472572.1|5085937_5086705_+|SDR-family-oxidoreductase
MFTSSAARPLALVTGASAGIGTELARQLAVDHDLILTARRGDTLRTLAEELKARGAACHVFPADLADPAAPRWLFDQIAAAGLVVDVLVNNAGFGDVGPFAKADLGKVLQMIQVNVVALTELTGLFLPGLLARNRGRVLNVGSIAGFQPGPYMATYYATKAYVNSFSEALYSELRGTGVTVTVLCPGPVATEFAAVSGMQVTRAFSAGQAMAPGPVAAAGLGAMRAGRRLVMPGWRNRLMVFLERFTPAASSSGR
>NZ_CP053452.1|WP_171472571.1|5084521_5085757_+|MFS-transporter
MMFLQYFGLSAVIVPLTRYLQTPPGAGGLGFSPLHVGYIYMTFAVGAVVAPLVVGLLADRWFAAEKVIAATHAAMAALMGAAGRWCDTYDGTGADPADAVGPLFALVLGYAVGTQITLTLTNVISFRNLAAGAGAFWYVRLTGTFGWIVAGGVVGWGMNPISPQPLYVAAATSAVLAAFALALPHTPPKGYGRPVGEVIGLPAVNMLRDRPFVVFAGVLVLCNMMNQFYALFTSPYLHDLGVALDLGPYGELTPEVVMTLAQWCEIGCMAASPWLLRHLSLKRLMVLGLAGLVLRNALLFSAHVPGIVAVGLPMHGWGYAFYGMLGAYFVDREAPQHLRAGAQSLVTFFGSGPAVLAGNFLASHTVATHRAGGLTDWQSVWLVPLAGYAVALVVFVLLFREPPNADRSVQT
>NZ_CP053452.1|WP_171472570.1|5083852_5084386_-|hypothetical-protein
MAIAGVFMFVLLGVVLLSALFAGGALVRAAVRLTNRLLGPAKTEPVDPIEDWDWDGDLEPVPPRRRTRAGAVPVPTHGNGMMIAFLSALASGIVFALLAVLVEELDVGDAVPPGWVVLALVALTAPPGLAALTLLLVMLLPTTLLRAALIALVHHALALFVVLVVVSAVFLVAEVFG
>NZ_CP053452.1|WP_171472569.1|5083154_5083691_-|hypothetical-protein
MADGIGVLICVMVFFLPIGLLLAAVILRGGVSLANKCLPRLSERTTGDWDEDEDEDDYERPVRRRAAALIPEPGVGKAMGIVFTNFIIGVIASIPISVAMGVGLGNMNGGQGDPVMSLLASLVQLPIGFLIAAGIRAGMLPTSFARACLVVLFEYLIVLVIGLVIAVPLGVLALLLSR
>NZ_CP053452.1|WP_171472568.1|5082238_5083066_+|metallophosphoesterase
MPPTFVDYPVIAISDVHGRVEWLDKLLAKLRTRPEWPRARLVFLGDLVDRHPEVQALVSRVLELLAEKPGSTCVAGNHDFALARAAGLGGPPSASWAWRYAANYDHKPTFLSYLGRTPDFLPAGRWEQELADLKAAMPADHRAFLAELPWVAEAEGHVFLHNGLSPELDCPAAVQVECLHRKVWDRAVVNPRFGTDTDRLFNPEYPVWLGADKRLSAHPLPLPGKVQVTGHITVDAPDANAVRVRIDTSGGTREPLTACVLSGPAAAPEFVFSDR
>NZ_CP053452.1|WP_171472567.1|5081611_5082061_-|hypothetical-protein
MRVDLFGLTMEAPSVTFYLWSPWRCTALEHKLFEALKTVPNATVEAAPDEIRLHVTETKSWRTAVQNLSRVLKGWQEEATDGGKDERRSWRWLLEADVDATGYDMTGEKASIWAYVRLSLDRGGPGEAEKGEDIDLNGFGVQVWGEKAE
>NZ_CP053452.1|WP_171472566.1|5080170_5080854_-|Tad-domain-containing-protein
MRTNPRSPRAARRGTMLPLLAVSVISLFAFVALAVDLGMLAVSRTQCQNAADAAVLAGTRTLNNKDGTLYNNLPAAVSTVRGVATANTHLSANLTPGQVSKVEAGQYMYDPTSQTFGVSGWTDVTSGGAVNPAAGGSWTALRVTLSATQPTYFMSVFGVAAMPSGAQATAVFRPRDVAFVLDMTGSMGFSSTVHDRRTASLTGKVSSMASVFPGGCRCACCPCCLSP
>NZ_CP053452.1|WP_171468866.1|5079854_5080202_-|hypothetical-protein
MPAVPAASRRDPAATRRRWAERLERFRRSGQTIAQFCAAEGVSPPSFYVWRRTLADHAPSPVPVTPTLVPIRLTPSPAGPPIEVVFPSGTVLRFPVDARPEVIAALVHAVEGRPC
>NZ_CP053452.1|WP_171468900.1|5079483_5079861_-|IS66-family-insertion-sequence-element-accessory-protein-TnpB
MLSIPPTTQLWYGGAVDLRLGFDGLYRHVQSTLQADPLSGHLFIFTNRSANRLKALYWTRHGLCLWCQRLERGRYHFPTPTDRKLELTATEFAMILDGIDYSSAKRFTRYCRPKASESDLRTRTS
>NZ_CP053452.1|WP_171472574.1|5089944_5091438_+|NB-ARC-domain-protein
MRYLLLAAFFTCAPAHAQEKKDEPKKDPYPPIPTVDLKLKEPVEYNKDILPIFEGKCFVCHSGSVTEGKYDMGTHASVLKGGGKRGAKVVVPGKADESFLFLSCSRQTKPMMPPKSEEPLTSKEVTLIKLWINEGAKAPTSVKVREKVIVSLPPALVKPVRAVAVAPDGKTVAASRGNQVNLFELKVTPADKKGGPEKKEWEYAKSLYDPELKTPDGKTAKAAHVSLVESMAFSPDGKTLVTGSFTELIVWDVAKAAPTRRIGGFVDRVCCIAFSADGKFFATGGGAPTEDGEIKVFETESGKLFTEIKAGHSDTVFGAAFSPDGKLLATCGADKFVKVFELPTEAGKPAKLVKSFEGHTNHVMGVGWTPDGKKLVSCGADNFVKVWDYEKGEKVRDIQGHQKQVTSLFFVGKTAQFVTGSGDATVRMWNADNGGNVRNFPGAADFVYAVSASSDGTVVASGCEDGVVRVYNGANGTLMKAALPPDAEPKKDQPKKK
>NZ_CP053452.1|WP_171472575.1|5092001_5095328_+|sigma-70-family-RNA-polymerase-sigma-factor
MRLTAALQLVRTATLAPVCDTSDAELLRRFCRDRDETAFREILRRYEALVRGASRRLTRDHDAVDDAVQATFLALARKAHEIRHAEALPSWLYRVARSVTARTPGIVTVVAEPVAPAPSPLDQLSAREALAIFDEELDRLPPAHRSAVLLCTVEGSTVEDAARRLGTTPGAVRGWLQRGRDRLRQRLSARGVELAVALSLLVVGSATRAAGPAREAIVQSVMAAHRPVTALTRLASASYAVWVSLGALTAGTVSALVLLSPGAGNPQPVPPPKVEAKADELVTRDNLPEGAVARIGSPRLRHAGDVTAMAFSNDGRWLATASPASGDKSVRVWDLADGKQRHRIPIAVNPHESSARHRAVAVAFAADGKRLLILDAHGFRSFDAAAGQRELEKVLFTELDPNQFFPAEGIIGTGFSPDTKMFAVVRRNGEMLLGDTATGAVKRTIAKSMNVPENTYYTHADVLFTPSGSEACVPIPADSVPIFDTATGESKRSLPKELVPQYGATNNAAFTADGRQFLSAVTTAQKGRAATHAISVGDVATGKVTRAIPAPTPPRALALSPNGKLLAVAGDSNTGGSAIRVLDLESGKELQSVPLGLTPALLTFSPDSRFLAGTCHYEGRVTVWDIGKNALHPQSADESTWAARFDRLGNVELNRFVFDRKVTVDWRNGKVLEDRKLEPRGRWFEARSADGKVRAELDVSNDKPRLPLAILVKDAATGRAVARLDGLPDYPRGMVFADQNRLLVTVTQDDVLSVWDVAAGKLLWSEKYPARSFGYMGMGQPEFDAANRRMAIGSKTEAGTVIDIWEFRTPTRVARWEVPHVLLTDGIAFSPDGEVVAGGSETVTCWRVPDGHVIHTLSGHVAKESPNDRLAIRCAFSADGRKLLTVDGSGTIRVWEFATGQLIRTFTGHHGQTNAAFSPDARAIVGASSDAPVLVWDVYGLAAPPPFDADRVWTDLADPSAATGFRAVRELCAAPREAITFLKGKLKPETIDPKTIDGWVKDLSAEEFAVRERATAELAKQGETIAPLLRNALGTTTDAEGRHRLTALLRKTERLSPADLRVRRALDALEHLGTPEAHEHLNALARGTAGCLRTVQAAEALSRISGQK
>NZ_CP053452.1|WP_171472576.1|5095456_5096305_+|hypothetical-protein
MFVWKRLLLLLPLLVCGCAQGFDRGALQERLNDGTLQSPDSAIAEARGLRPQLRFPCRIAVYFKPPQDHNWHWTTEDKAALDGCAAALKKDGIAADVFPLPELVINKSDSKLDLKDLRLAAAKCGADALFVVYGAAQTDSYKNFAMVFDLTVVGGFIVPASHRDSLFLIEGVLFDVDNGYIYTGVQAESEGKIIRPTFLIDDKDAVAKAKTKAVTQFGEELLKRMRVLATMPQVQYPVGRKSDVPPIKPASNLIPVLSGPAPRAPINAGGVMTGITAPEPVP
>NZ_CP053452.1|WP_171472577.1|5096515_5099377_-|sigma-70-family-RNA-polymerase-sigma-factor
MNSAADLTNAIRHLRAPSGGALGDPELLDHYARDHDQAAFAALVWRYGPLVLGVARRQVADRHRAEDVFQATFLALARSATKLGGRAVLANWLYTVALRQARKARAHAARRAALEGAAPPRPRGGADPLAEITGRELLQVIDDELARLPDRLRLPVLLCCVQGLSREEAVRRLGWSEGTLRGRLERGRRKLAARLTARGLAPSAVLLAPLAAVVVPADLLAHATELGAAPWSQSVPPVVAALATAATHRPLLPAVAIAGCLLTAVVVGTFAFGRGQPVEPVALLTSAPLAAAPTKAPPAINDPLPDGATRRFGTARYRHPTTIESLAVSADGKFAVANSGTRINGMIRAYDLATGRIRFAIESEPGALVYGVAVSPDGKTLATKRNHAVYLYDAATGKETGHIEYPGANPSTNTDLIVFAPDGKRVAVTAADGKGLHLIDLTRGEVVRTLPHAHVVFAAAFSPDGKQLVGGGYDSEKGTYFARLWETETGKERHRLPFGNGGIRCVAYSPDGATVAVSGDGRRAPAVKLFDAATGKERLTIPFPDATSVRSLAFGPDGKTLAASGGASTRLFDAATGKEVLKIDRKATGLRFTPDGEALVGAVAGAIYCWDAATGQALTPEGGDSPVAQIEVPADGKRVVTRGQDGDAHVWDARTGAHLRRVDVTWQRGLTLSPDGRYLVWPVGDETVQFKDPDQPNAVHTGSRLRMFDLTTNTFVERFGGFEGGANDLFFTAAGKTLVTVDYRDGAVRFWDVGTGKMERSFRVSERGQYQVWRARLSPDAKVLAVTYQREALGGIFGRHAVKLWDCATGKELHDLPGHWSYVEAVAFSPDGTHLVTGSEPLSAFTQKQLRLPTDQVFVWNVATGKAVAQLPIGATAAAFAPDGKTLAVAVGDGTLQFWDAATWQLRSEFPGPRDRVTALAFGPDGRLYSGALDATVLVWDPKTAKRPPAEPK
>NZ_CP053452.1|WP_171472578.1|5099580_5102916_+|sigma-70-family-RNA-polymerase-sigma-factor
MGEKHARGVVRRLAGHTVPDEVLLARYRDRRDDSAFAELVRRHGRLVRTAASRVLHDPADIDDATQATFLVLVRRAATLEARSGLGPWLYGVAHRVAVRLRARTGRERALGDADPADRSRPADPTWREACGALHAELDRLPDRYRVPLLLCYLEGQTRDEAATALGLSAGTVKGRVRRGLETLRRRLERRGVTLSAGLMTAVATSHPGATAGDAAALVFGTPSPRTCQLVEELIVGQSLWKWAVGVAVVLVLGAGSIVAAVLTAGDPPTPTAVTWAAAPPTDAPAPVKADAAGDPLPLGALARMGSSRFHHGSHIYRLTISPDGKWIISSNVWTGYRVWDLETGREQVPVGMPANARFTGLHGDGRPAVQWEAIVAPAGKRIAAVVPDRERPITRVLDAVTGEEVVTVPASLDQFLHRPGISVDREPEVSPDGKWMLWARTTFDDNRAKKTVYIAELAAKSPTPAVFGEVGERTLFGFAFSGDGQSVVMHFNDAFELWDLKTRAVKLKVPNGAVKFKEPIALNKTDAGHAVVSPDGKTLAVAQPEARTFQLWDVASKKELPPVADPFTTGEVHVLTFSPDGRQVVGSIPGGPLRVWDVATGAKVRDYRTDNNGPPSCAFTPDGKRLAFGQLDHVVVFDTATGKPVHDFGGHSGTVWNLAFTPDGRLVSGSREGLVWDPRTGRELGGLPGHLQGLAVSRDGRQIATSGTDKKVRLRDAVTLEEVRVIDTKGTAAYNVAFSADGKELAVRGDKPGIQVYDTATGRPLRVVASGELVQWFWLTPDGRRLVFGPLSDETKVHVREWATDKPVLTFDIRKQITHGQLLSADGRFLATKGWNGTVCVCDLGTGKQICTFDTNPPRKRKGAGVIVGAVAFSPDGRTLATGSAGGPIRVWELATGGERFQLDGHRGDVRALAFSPDGTLLASGSEDRSAIVWDATGMALSTDPKHRPKDAAEAWVRLGDRDTAVGFAAMKYLAARPAEAVPLVGKHLRPVPVADPKKVVGLIEKLGSPDFAEREAAEKELDAVGEGAAEQLRTAAAAAESPEVRQRLAGLLPPVEGLALTGDRLRRARAVELVERAGTAEARALLTEWAAGAGGARAHRGGPVRTVAAR
>NZ_CP053452.1|WP_171472579.1|5103138_5104746_-|HEAT-repeat-domain-containing-protein
MTPRMTWVRPARRGAAAVLLALLVGAVVNASPTADNHPDKKEPDKKEPEKKEPEKKEPEKKEPEFVWPTEINGKDIHAVMKNLEDPDPVTRELAATLIPKFGPPAQKGEVSKLLVKRMAAEKDPGVKVAIFAAVGNLQFEHEADNREALRILAQVIDTSVPGGLGRLRAIQTVTMFGAKGEGAITALTGTALNDPSYTTRQNIAIALGRVGSSETTGPNMKALRALADRLSKDESAAVRMEATQSLYLLGPPWAEVKKPPQFDLTAKALKDLKQAQVPDTVLVKLGPLSNKELQRADFEKEVGKLLTADEWNKFGELITFHSRAPETDPPIDVKSAAVIIQLMRLRVGDPKTKPPTPGLEKDKQVEIWARVVLMRFDPNEVNDENLDAIARYLTSPDIGVKLQALGAIKLIGEGASKKLTDVVRVMAAKGATDETLVAAISAVAAMGAKAKPALPDLKELLEEKKKAHTAKALELAKKKNDVQLTGEEYALKEIVKLLETAIDIVEKAKEKDKEKDKDKEKDKKAAQEAAPAKRP
>NZ_CP053452.1|WP_171472580.1|5105045_5106968_+|trypsin-like-peptidase-domain-containing-protein
MLKRCARVSRPAVLGRLLGLVTLALVTWGTAAAAADTKIDPAALKKVKAATVHIRVTFADGDVSEGSGFATRLRGLVVTNAHVVGMLDNDSPRPTKIEVTFNSGEANSKTIQSKIGYVDGEADLALLMVPSKDFKEYPDLLPVGYSAQLTETQDVFVVGFPLGKQAGPNVSVTATSVTSLRKEGGAIKRVQVGGGMHPGNSGGPLVDKDGKVVGVAVSGFAGTQVHLAIPTEQMNGIFNGRIKNPVFDVPYRDGDKIKVPVRFEKADPLNLMKTIAVETWVGKPGPNRPEGNKAPPPLPDDSPITTTELKPDAKGVYAGELELDGTKDPKMAYWLRYKVGRGGDQTIWYPGSVLASRLGTPVDRKPVAIKYEPPLNKTDSVLLTSDASFRIREADGDDHTLSMVLKGTLKETVTDQTKDGKWRKRVTYEGLNTTATVDQKPITGAERLTKALADITLLASEIDVAKDGTVARNLADFSKVPQASRGPLALASDQVQQSLDSLALPLPPKEVAPQATWQGKQFYELGALGYTVPATAEVTYTYEGFYVGRTGRPIAVVTFKGPLQRVAPPKPKKGARPGKEPTLNGRVEGKIELFADTGVFLSANERVRAELDLDFDGKPAKAIGVLNVQATRLGPPPPKK
>NZ_CP053452.1|WP_171472581.1|5107154_5107922_-|HEAT-repeat-domain-containing-protein
MAGDRAHLRRRSGGGRPQNAPAETGRPRTERRRGATARGRPEPASRPARAHAPARPDPSVAADKAITDALAGLDKPDDFSRAGAAADLGRLTPKADRRAEVVKRLADVTTDPQQSVRVEAVKSLGVWGTRDDVPTLIRALDHEDGATRRTAALAVRRFRDDRAVPALVRRLGDPQCTGESAKALIDIGPAAERPVIPALASTDVTEQGAAIDVLKEIGTVDSVPALQKVVSGKSFWSTKAVEALKLIRARAKKKN
>NZ_CP053452.1|WP_171472582.1|5108832_5109522_+|hypothetical-protein
MIHRSGLLLIGLVTLATPAPAAAGLIAYADAGAFQAAAAGGGNIDFAGMVQSHQYVSYPASGGLSVGGVTFSIANPVAGDAVNVTSRNYYPGATYARDFLVNAYVPSANTLTMTITLPTPVTAVGLDLGTFKGGALGFAFSNGATFTQSGTATFGQTAFLGFTSSPPFTSLTITESLSGGEALVIDDLQYGIAAPEPASVALLASGLLAVGCRRLLGRRTTGDAAPRAA
>NZ_CP053452.1|WP_171472583.1|5109719_5110796_+|hypothetical-protein
MLRPASIRALFCVPLVASCAVVLAQEPKKPLVSGDPARVERIRKAAMPKIDKPVLFDTPEADAILAALEVFPPDNPWNLVVTDWPLHPRSKDIVASIGTDKPLRYNTDMNFVLVPPNQKRVAVKLGYAEESDKGPYPVPDGMIVEGWPAGYKRDPNSKTTTFDQMQRTTPDDNSDRHAIVVDPTNRVLYEFYQLRRTNTGWSCSNEATFDLKSNKLRPDGWTSSDAAGLPIFPSIVRYDELKRGAIEHAMRVTVVKSRKAHVYPATHHASQRTDENLPRMGERLRLRTDFDTSKFSPEVKTILEGLKKYGMFVADNGLDWAISCAPDERIPVLHDELRKVKGSDFEVVVAPAGYKPPK

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Crispr_ID: NZ_CP053452_24

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053452_24

5496032-5496559

Orphan

Consensus_repeat	Method
GGTGACGGACGCCGGGTTAAAGGA	CRISPRCasFinder

7 spacers

The CRISPR arrays of NZ_CP053452_24

>merge|NZ_CP053452|24|5496032-5496559|CRISPRCasFinder
TGTCACGGACGCGGTTCTAAAGGAGCTGACCGCACTCACGAAATTGACCACACTCGACGTGAGAGGCGGACGGGTCACGGACGTCGGGTTGAAAGAGGTCGCCACCCTTCGGAACCTCACGGCCCTTTCCGTGAGCGGCCCATGGGTGACCGACGCCGGGCTGAAAGAACTCGCGCCGCTCAAGAAGCTCACCCACCTCGACTTGAGTAACACCGGGGTGACCAATGCGGGGCTGAAGGAACTGGTCGCTCTTAAAGGTCTCACCTCGCTCAGGTTGGCAGGGGCAGGAGTGACGGACGCGGGGATGAAGGAGGTGGCCGTGCTCACGAACCTCACTTCGCTCCGCCTGGGGAGCGAGGGTGTGACTGACACGGGATTAAAAGAACTCACGGCCCTTCGGGCCCTTGCCTCACTCGACTTGAGCAACACGCGGGTGACGGACGCCGGGTTAAAGGAACTCGTACCGCTCACCCGCCTCACCAGGATCACGGTGCATTCCACCAAGGTGACGGACGCCGGGGTAAAGGA

>NZ_CP053452|24|24|5496032-5496559|CRISPRCasFinder
TGTCACGGACGCGGTTCTAAAGGA	GCTGACCGCACTCACGAAATTGACCACACTCGACGTGAGAGGCGGACG
GGTCACGGACGTCGGGTTGAAAGA	GGTCGCCACCCTTCGGAACCTCACGGCCCTTTCCGTGAGCGGCCCATG
GGTGACCGACGCCGGGCTGAAAGA	ACTCGCGCCGCTCAAGAAGCTCACCCACCTCGACTTGAGTAACACCGG
GGTGACCAATGCGGGGCTGAAGGA	ACTGGTCGCTCTTAAAGGTCTCACCTCGCTCAGGTTGGCAGGGGCAGG
AGTGACGGACGCGGGGATGAAGGA	GGTGGCCGTGCTCACGAACCTCACTTCGCTCCGCCTGGGGAGCGAGGG
TGTGACTGACACGGGATTAAAAGA	ACTCACGGCCCTTCGGGCCCTTGCCTCACTCGACTTGAGCAACACGCG
GGTGACGGACGCCGGGTTAAAGGA	ACTCGTACCGCTCACCCGCCTCACCAGGATCACGGTGCATTCCACCAA
GGTGACGGACGCCGGGGTAAAGGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053452.1\|WP_171472851.1\|5493171_5493345_+\|hemin-uptake-protein-HemP	unknown	unknown	gnl\|CDD\|378463
NZ_CP053452.1\|WP_171472846.1\|5486379_5486874_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274528
NZ_CP053452.1\|WP_171472855.1\|5498186_5501330_-\|PQQ-binding-like-beta-propeller-repeat-protein	unknown	unknown	gnl\|CDD\|238121
NZ_CP053452.1\|WP_171472856.1\|5502201_5505687_+\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|225201
NZ_CP053452.1\|WP_171472857.1\|5505926_5507663_-\|alginate-export-family-protein	unknown	unknown	gnl\|CDD\|372583
NZ_CP053452.1\|WP_171472845.1\|5485260_5486151_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171472858.1\|5507910_5508387_+\|NADAR-family-protein	unknown	unknown	gnl\|CDD\|271319
NZ_CP053452.1\|WP_171476126.1\|5484115_5484772_+\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|225136
NZ_CP053452.1\|WP_171472850.1\|5491826_5492828_-\|PepSY-domain-containing-protein	unknown	unknown	gnl\|CDD\|377164
NZ_CP053452.1\|WP_171472844.1\|5484895_5485204_+\|ferredoxin-family-protein	unknown	unknown	gnl\|CDD\|131231
NZ_CP053452.1\|WP_171472849.1\|5490464_5491778_+\|aminotransferase-class-V-fold-PLP-dependent-enzyme	unknown	unknown	gnl\|CDD\|223594
NZ_CP053452.1\|WP_171472860.1\|5510608_5511628_+\|aldose-1-epimerase	unknown	unknown	gnl\|CDD\|224928
NZ_CP053452.1\|WP_171472859.1\|5508422_5509625_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171476127.1\|5509921_5510446_-\|inorganic-diphosphatase	unknown	unknown	gnl\|CDD\|376376
NZ_CP053452.1\|WP_171472854.1\|5497526_5497970_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171472847.1\|5487037_5487358_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237030
NZ_CP053452.1\|WP_171472848.1\|5487504_5490330_-\|M48-family-metalloprotease	unknown	unknown	gnl\|CDD\|320687
NZ_CP053452.1\|WP_171472861.1\|5511693_5512131_-\|Hsp20/alpha-crystallin-family-protein	unknown	unknown	gnl\|CDD\|223149
NZ_CP053452.1\|WP_171472852.1\|5493644_5494526_-\|peptide-chain-release-factor-N(5)-glutamine-methyltransferase	unknown	unknown	gnl\|CDD\|236467
NZ_CP053452.1\|WP_171472853.1\|5497055_5497283_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP053452.1\|WP_171472851.1\|5493171_5493345_+\|hemin-uptake-protein-HemP	gnl\|CDD\|378463	pfam10636, hemP, Hemin uptake protein hemP. This is a bacterial family of proteins that are involved in the uptake of the iron source hemin.	7.02584e-14
NZ_CP053452.1\|WP_171472846.1\|5486379_5486874_+\|hypothetical-protein	gnl\|CDD\|274528	TIGR03345, VI_ClpV1, type VI secretion ATPase, ClpV1 family. Members of this protein family are homologs of ClpB, an ATPase associated with chaperone-related functions. These ClpB homologs, designated ClpV1, are a key component of the bacterial pathogenicity-associated type VI secretion system. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	0.00435348
NZ_CP053452.1\|WP_171472855.1\|5498186_5501330_-\|PQQ-binding-like-beta-propeller-repeat-protein	gnl\|CDD\|238121	cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment.	1.21236e-65
NZ_CP053452.1\|WP_171472861.1\|5511693_5512131_-\|Hsp20/alpha-crystallin-family-protein	gnl\|CDD\|223149	COG0071, IbpA, Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones].	1.99944e-28
NZ_CP053452.1\|WP_171472857.1\|5505926_5507663_-\|alginate-export-family-protein	gnl\|CDD\|372583	pfam13372, Alginate_exp, Alginate export. This domain forms an 18-stranded beta-barrel pore which is likely to act as an alginate export channel.	2.72732e-81
NZ_CP053452.1\|WP_171472858.1\|5507910_5508387_+\|NADAR-family-protein	gnl\|CDD\|271319	cd15457, NADAR, Escherichia coli swarming motility protein YbiA and related proteins. This family of uncharacterized domains was initially classified as Domain of Unknown Function (DUF1768). It contains members such as the E. coli swarming motility protein YbiA. Mutations in YbiA cause defects in Escherichia coli swarming, but not necessarily in motility. More recently, this family has been predicted to be involved in NAD-utilizing pathways, likely to act on ADP-ribose derivatives, and has been named the NADAR (NAD and ADP-ribose) superfamily.	1.56781e-67
NZ_CP053452.1\|WP_171476126.1\|5484115_5484772_+\|methyltransferase-domain-containing-protein	gnl\|CDD\|225136	COG2226, UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism].	1.05435e-37
NZ_CP053452.1\|WP_171472850.1\|5491826_5492828_-\|PepSY-domain-containing-protein	gnl\|CDD\|377164	pfam03929, PepSY_TM, PepSY-associated TM region. The PepSY_TM family is so named because it is an alignment of up to five transmembranes helices found in bacterial species some of which carry a nested PepSY domain, pfam03413.	0.00248055
NZ_CP053452.1\|WP_171472844.1\|5484895_5485204_+\|ferredoxin-family-protein	gnl\|CDD\|131231	TIGR02176, pyruvate_flavodoxin/ferrodoxin_oxidoreductase, pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric. This model represents a single chain form of pyruvate:ferredoxin (or flavodoxin) oxidoreductase. This enzyme may transfer electrons to nitrogenase in nitrogen-fixing species. Portions of this protein are homologous to gamma subunit of the four subunit pyruvate:ferredoxin (flavodoxin) oxidoreductase.	1.33142e-08
NZ_CP053452.1\|WP_171472849.1\|5490464_5491778_+\|aminotransferase-class-V-fold-PLP-dependent-enzyme	gnl\|CDD\|223594	COG0520, csdA, Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones].	1.29483e-68
NZ_CP053452.1\|WP_171472848.1\|5487504_5490330_-\|M48-family-metalloprotease	gnl\|CDD\|320687	cd07328, M48_Ste24p_like, M48 Ste24 endopeptidase-like, integral membrane metallopeptidase. This family contains peptidase M48-like proteins that are as yet uncharacterized, but probably function as intracellular, membrane-associated zinc metalloproteases; they all contain the HEXXH Zn-binding motif, which is critical for Ste24p activity. They likely remove the C-terminal three residues of farnesylated proteins proteolytically and are possibly associated with the endoplasmic reticulum and golgi.	1.01222e-26
NZ_CP053452.1\|WP_171472860.1\|5510608_5511628_+\|aldose-1-epimerase	gnl\|CDD\|224928	COG2017, GalM, Galactose mutarotase and related enzymes [Carbohydrate transport and metabolism].	0.000478188
NZ_CP053452.1\|WP_171476127.1\|5509921_5510446_-\|inorganic-diphosphatase	gnl\|CDD\|376376	pfam00719, Pyrophosphatase, Inorganic pyrophosphatase.	2.78511e-70
NZ_CP053452.1\|WP_171472847.1\|5487037_5487358_-\|hypothetical-protein	gnl\|CDD\|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	0.000622353
NZ_CP053452.1\|WP_171472856.1\|5502201_5505687_+\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|225201	COG2319, COG2319, FOG: WD40 repeat [General function prediction only].	9.12328e-35
NZ_CP053452.1\|WP_171472852.1\|5493644_5494526_-\|peptide-chain-release-factor-N(5)-glutamine-methyltransferase	gnl\|CDD\|236467	PRK09328, PRK09328, N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional.	1.83283e-127

>NZ_CP053452.1|WP_171472852.1|5493644_5494526_-|peptide-chain-release-factor-N(5)-glutamine-methyltransferase
MNPAPQTPTIWTIKALLAWTTDFLTAKRVEGAKREAEVLLAHVLGGTRMDLFVRFDEQPTDAERARFKELIQRRVAGWPVAYLVGSREFYLLSFDVDPAVLIPRPDTETLVLEAIKRLKPLTEPAVLDVGTGSGCIAVSLAHQKKDARVTATDVSPDALAVAKRNAGKHGVADRVTFLHGDLFAPLAGRGHFDLIASNPPYIAQSEFAALAPDVRDHEPRLALDGGPDGLAFYRRIAAGAGPFLKPGGSLLLEVGFTQDAAVRALLAERPELDVGATLKDAGGHLRVVTAKRR
>NZ_CP053452.1|WP_171472851.1|5493171_5493345_+|hemin-uptake-protein-HemP
MSEDEAENEERAAPEDEAPRLLSADELFAGKREVWIELDGTRYRLRITRRGKLILQK
>NZ_CP053452.1|WP_171472850.1|5491826_5492828_-|PepSY-domain-containing-protein
MSDIDPNELSVQLRDEQPVRRALRKRVMHAVRRAHLYCGLFLLPWAVLYGVTGFLFNHPSAFADAPTLTFGPSELVGTPMEVPPKPEAIAAQVVTALNERAKDAGPYTLIEPAQARYTRDFAFAVVRADGRDVSLLFDVNAPGGTVRSKPAAPPAKTERAPFATAPRGQPPTAAPADPLRLPDPLHERVKAAVPVVLDRTGFPTGSVTVTSVPDLSFRMSDGTRVWAVTYNALTGSVSGAPVESVAPPEEMSARRFLTRLHLASGFPGRASTKWFWAVAVDAMAFVMVFWSVSGLFMWWQVKATRRFGALVLLASAAAASALGVGMHGALTPK
>NZ_CP053452.1|WP_171472849.1|5490464_5491778_+|aminotransferase-class-V-fold-PLP-dependent-enzyme
MPNETQNAGGDGARAGRPVPDWGAARRQILLDPTVTMLNTGSFGPLPEPVFDRATELRRRLAAGPTDFFVRQAPPLLWAARERAAAFLGTVPQRLVFTSNVSAAINLVASGLRLNAPGEILMSDHEYGAMIWCWERAAQRQGLTIRTFPIGVGGGPRGGPPGPPSCLPPMTTDPAEIVAAAAKAMTPRTRLLFFSHVLSPTGLVLPAKELCAEARKRGVVSVVDGAHAPVYIPLNVADVNADFYTANLHKWLLAPSGAGFLAIGPGNEDRLQPLHVSWGYHPDKYPIGETTASIGPDRRDNYGSTPRTRFLEFEGTRDICPWLAVPAAIDFQAELGFDNVRGRIAELAAYTRKVIGGLGLPLATPPVPALSGAMTAFELPAGLSAPTLRKELWARRVEIPVIERPNRLLVRVSHHFYTTEAEIDRLAEVLREIGIAR
>NZ_CP053452.1|WP_171472848.1|5487504_5490330_-|M48-family-metalloprotease
MPPPDELDLDPVEPAPSGSRSKESTAVKPAAPRTKGGTGKGGDAPERTSVARGRKVPYPPSPSDVPDDLTDYADSYVAQQNKLLAGLFVFLIFYIGMILFFTLIGAWCVWSIKHLPVAKVAGLVFSGIFFLYLVKGFFKRHPMNKEMHLEVTEEEQPVLFEFIYQLCDELEAPLPNKVFVSPDVNAAVMPRTSLINLFVEPRKDLLIGLGLVNSVNLSEFKAVLAHEFGHFSQSAMASSYTYVASRIIGDLIEGEDWFDRMVTWCKKQDNVFAVIGHAIGAPLWVGRTVLEQCYKAIALQRLVVSREREFHADLVAVRAAGSNAVVHCLLRTVFGLRCFDQAFNDLATALDHKLYSNDLYLHQDRAAAVVRRKKKEPHLGLPPLLATPHDGKDIEVFDAEEEALTDEIPPMWRTHPSNSDREKNAKERFVPAVVDHRSPWVLFDEPGELRERMTYKFYRMVFRVPKNAELTDAVRVQKFIDNEHAETTYDPKYKGAYDNRPIVPGDLPELNVLVRDTPWAEERMEKVLDKLYDGCEDHAEARSDLNKELEALQSGIVGRPSKSLRRKIDEVEEKRAENGEWFKSFDRRVYLVHVQMAARVDPALRDELVERYRFQLEVQRFFFTARDAHSKAEMYFQTMVAAVQGKIQVNRDFFGEFMQALRESWKALKFIIRDAREINLPAMKNFEEGDNLAAFILVGKMVPEPPLSYFKGVWLDKLMNQLQGVQQKCARLHFKSLGGILQLQETIAARWRAQREPVAAEVLDEAPVPAEVVPAAPGGSEVVQSAHTPLGRVDSVRAKAAELPVEVIDAEVVPDEPIAAEVIEAEVLDAAVVPSEPLPAAQAHAVPPEPSKSMAAFMASPAPAEARGAHPPPVVHPPVPPAVPVQSLPSADPFDFQAPAPPRPAPGAAPAVDPEVPRPAPKLAPRSRRPPRPSRNCRPMR
>NZ_CP053452.1|WP_171472847.1|5487037_5487358_-|hypothetical-protein
MKPTEAVFSLDADDYQPAPVPAAVQKADPAPASGAVPAVAGTADATPAPAPDAPKPALSDSAVVEVPPSKPGFGSGVSPALGQADTRRPRLKITIVKPGEKSPLAK
>NZ_CP053452.1|WP_171472846.1|5486379_5486874_+|hypothetical-protein
MDDIFLPSGRLRPDILDEATTRVLREALAHTRATNWDSVRTPHLFMGLLAAPDSGVFKWASKLGADLPGLLDQFRDLFYQSNAEPVPPLLLNREFLSDNVIRLLRDAYGRAADCGRFSLTPMDLLITLFTTPNSIVAECFERIGVTAAKLTELAVLAERDVPAK
>NZ_CP053452.1|WP_171472845.1|5485260_5486151_-|hypothetical-protein
MLRRLWAAIGLVLAAGLAGAFSPAPDAPPGAAVTDSEGAEVKVSALKFGTGTRRLAWLADPGGATEDARKGPLAVEIREPHSTTFKQGIVTYVPVESVESIKYDYERKVALVAVKGLTEPLAGTLEYQGLNVFVFGGTVDGKAATFSGGAFKKGNIKAVAFPEAKPVGAKKGQAPWLVQIDQPKALDPTLKGSHFQFLYQFPNGSEVLTDAAAVRKGEPLKLDELKALTPLAVDLNNHTAAVEVLAGDGTEKVLILPPMEKDGKKGVLVGLLAEVDAGWKLFPLHTIKVMKRPKKD
>NZ_CP053452.1|WP_171472844.1|5484895_5485204_+|ferredoxin-family-protein
MKQTVPERATCDETPGRLVPIVSAQRCENKGPCVQVCPYDVFEIRKLTPEERGGLSLLTRLKVWVHGGKQAFVVRPGECHACGLCVTACPEKAITLSKPAEA
>NZ_CP053452.1|WP_171476126.1|5484115_5484772_+|methyltransferase-domain-containing-protein
MNAAHHESNRHFYDRIAGAYDLIADSNERAARQAGVQALGLKPGEAVLELGFGTGNEVLDLAGLVGPTGKVAGIDISTGMLGVANRKLTEAMPTTPIDLRVGDARQLPFADRAFDAVYTSFTLELFPPADIPTVLSEARRVLKPDGRIGVVSMATVLPGHHASALERVYVWMHRHFPHLVDCRPIDTEGVVSAAGFRIAGVTNLEIWTMPVRVVVGRR
>NZ_CP053452.1|WP_171472853.1|5497055_5497283_-|hypothetical-protein
MAPTPAGAPGWFRERVFDVGPRGTQADRAVLVALMLHIYPSADVNLLMLLDPTFDNVRWGTTADDPEPRWMLIDP
>NZ_CP053452.1|WP_171472854.1|5497526_5497970_-|hypothetical-protein
MTRADRDHLRTLAICHYVLGGLCFFFGGCAIIYLVIGLAIVADAPAPPGGNAPPPPEFLGWVFVGIAAFVLVFYWGLAAGLVLAGRCLDRRQGRTFCLVVAGFSCLFQPLGLVLGVFTFVVLQRPSVRDAFEPVREERPEPDAYDPD
>NZ_CP053452.1|WP_171472855.1|5498186_5501330_-|PQQ-binding-like-beta-propeller-repeat-protein
MSVAIRPLILLLLIGVTAPPPAPAQPAPKPGADPTADDVKALKEKFAEEREQAVRAKFPAEMLGRADELVKRADAAAASANFKSAARHLRDARWQLPYLPPGLPEHVTRVLGESRMRHADRVNALAYSPDSTALASASRDFTVKVWDIGNGREIVTYRGHVDQPDDPTRSGTNPLGAADVAFHPKEQVIASAGGNQVHTWDAATGKLIKVLVNLGKTDKPIKAIAFSPDGQRLAVGSDDGVLRVVESDTGKEVFTSPPRNARIEKVAFSPNGKLVAVGDNNSQVAVYAPQGKGNALAMSVQGVDLGAVAGVAFTADGGAVFACGRDGKVRLTAGPAPDGTSAPATATKLREYVGHTGMVNGLAVTADGKFLVTGGEDKTVRVWDVASGKQLRSFQGHTDGVTAVAVRGDGRQLASASNDGAVRLWDLTTVDDHKALTDAKESLWALALSPDGKHLAAAGADKTIRVYATATGALEAALDAGAAVTALAFLPDGNRLAAGGGDKIVRIWDVAAKKVLKELPPNALAVLAVAASDDGKLVASGSADATVRGFDPESGKELWKWAARKAACGVAIRKGGTHVAVGLADGTLALLDVSGAAPKELSAQFAHTAGCACVAFSPTGHRLASVGGDGAIRVWSVDPNGALVQQHRFEGQATPTSSTGFAPLSAVGFSPDGRFVVAGGADTVVRIWDVQTKTEVRGLRGHTDWVTAVCFTPDGRYVASAAAEKDNTIRVFELSGLDPSSAAGGHMLAANAVAVSPNGKLVATAGKDQTIKVWDVASGSEVGTLVGNAEDPLALAFLSDNALVMGGRLPSRSTGQLHFWSTAPPRLSESVPTGEVYTIVPTADGKKIGVWAARPAVNDSLRTSAYEIYDAKGKLLSTYTDNKGRDVRSATFTPDLAWVVAGDATGGVQIFDVVKNERIGGNMPLFERGVGDIGVTADKKTIVATDDEGLVKVTEVKNGKLNVVAKGKAHKTGVRALLVAPTGKTFFTISNDRELKVWSLTDLKADALTELRSWTVPVTVNGAAYTPDGKSVVTANADGTAYVLELP
>NZ_CP053452.1|WP_171472856.1|5502201_5505687_+|sigma-70-family-RNA-polymerase-sigma-factor
MFAATARRVLSISAPLDSDSELIHRFATSRDEVAFAELVRRHGGLVRGVARRVLADPHAADDVLQATFLLLATKAGTQTWGHTVGPWLYQSAYRLARKARARQGRRSERPAPIADTPARAADPGAPLAWADVRIVLDEELGRLPAAQRDPLVLCYLEGLTRDEAAAALGCSPGELKGRLERGRKTLRGRLERRGLTLAAGLTAVLAADPRLPTAAAAEVARLAAGGATGGAVPAAVAGLLRTRAGLAVQSAALAAVLVAAALGAAEMTADGPTPPKADNPPLAAPPVAAPRPGTDAHGDPLPAGAIARLGSVRFRPGASVAALAFSPDGKQLASWGEAVYRHGQLSLWDTASGREVRSVRTSWNRFVALAWTPGGRGFVVMKSPRFVNGQPPPVPDLRVWEFTADGPAPPAPDHLFDRTILTGPVTFDAAAASPDGKRLAVAVTSDGSPGKVRVYALGPTESVAGLKPAAEFDAPPVGCKALAFTPDGKLLVGVGPAAPDNKAKDAGTMIVWDAKTGTIARTIAAPAGAAQWKEFNFATTTDRVAVGLGTGDTFVADLRTGTGRTVATGHKAPEASADLGVLALDFAPDGRTLVTAGMGGMVRLWDRAGTKVREFGPHRSWTQAVAFAAGGTRLASGGSDGVIRTWDTTTGKEVGPSGGLPGSVRVLSVSADGATALTESRDEILRVWDARTGVLRRQIPTGGAVAACQLTPDGTRAVALVSGAPDQKLKVWDAATGADVTPVGFPKTIAAGGFQFTPDGAGVLTHVGDQLAAWAWPGGKSSAGPSGTKLWAAEIPKPVKGIYAIDGVTISPDGRHFVTAAVRSWENNSAEGMVDLWDLKTGKRIRRVAEGPSRPAVYARDGGLIVTGATGAVIPSAAGRSATVSADVVVVDPPTGVILREFAPSGRPDGLPSSGYSVVLSADGKVLFRSTAVGEVQAFEVATGQFRAAWPGHRDILFLLAAPAADVRRLVSGSADTTGLVWDVGFAVATPVPLAPERRAALWEDLAAGDAGKGYAAMRALAADPVGFVALAGEKVTPTPPGPSAAEMAAILRDLNSETFATREAASAKLDRCGESAVPLIRVELGKEESAEGRARLLRFLARHTGPPTSGDQLRRLRVVEVLEHLGTVDARRVLTALARGGPSRQTADAAAALERLRGRP
>NZ_CP053452.1|WP_171472857.1|5505926_5507663_-|alginate-export-family-protein
MFRFKYGAARAGALAAVLGTGGAALAQDPAVPMTLPVPVSTAPAVPDAPPGPPGAQPAQPGAPAAAEPAPPACTTCESVFDWKKVPRVRPTPRAGFFPVPPTGPGYYSALDLLRGQALEAPPKYPYPRTSAILPSFFDVDNFAYLDDPKNTEHDFFDPLKRVHLGDNWLFTTGGEFRTRYENGYNDRLTKTDNVYQLTRTRVYADLWYRDDFRVFAEYIGAWSAYQDLAPLPIDQQKSGIQNLFADVKIADLGGDPVYVRGGRQELLFGSQRLVSTLDWANTRRTFQGVRGFRQTEKWDFDVFWVQPVVPNTNRPAAAADANKFDSVDYHQNFVGAWGTYRPKKGQVVDLYYLMLDDTNTYSVLGLPRGNFTRHTTGGRYAGNEGNFLFDTEAALQFGSQNGRDVFAAMATHGVGYNFKDTTWSPTVWAYYDYASGGNPTNGSGTDHTFNQLFPFGHYYMGWIDAVGRQNIHDLNFHLYLYPTKWLTAWVQYHNFWLADKKDALYNTAGNPIRYDPTGRSGSYVGQEVDYVFNFHLSKHADVLTGYCALYGGEFLKNTASKTNAVNSGLFFLQFSYKW
>NZ_CP053452.1|WP_171472858.1|5507910_5508387_+|NADAR-family-protein
MPDQPPRAIHFYSTSGEYGCFSNFSRHPIFLRGKKWPTSEHFFQAMKFPGTEHEEAVRRAKRPMEAASMGRDRKRPLRRDWESVKDQIMLEAVRAKFAQHEDLKAVLLGTGDAELVEHTANDSYWGDGGDGSGANRLGQVLMRVRDELRAAEQNRPPE
>NZ_CP053452.1|WP_171472859.1|5508422_5509625_-|hypothetical-protein
MSNAPRSRRSAQLSVECLEDRTTPTFVARAGGDININGVNVPAGGVSIAAADLFPNRLDPLGFFSEMQYVTGTGPGTESLVRIWDSQTGALLSSFDPFPGFQGGVNVAVGDVLGLGTQQIVVTAAANGPPIVAVFNTSGQALSAFFLAGNTTFTGGLNVAVGHVSGALVSSGFDDSNATDSAPEQIILGTASQASIVAVTDGYGNISSIFQAFPGFTGGVTLAAADIDPTSFDGTGTSASDVPNTSSYAEIIVGAASRMPAVAVYDVWTGSVVERSAFWAFAANSGAGVTLAAGPTADQNQAQIFVSLLGTSTVSVFNGSTDILQGSFNVYPSNYSAGINLVVGYFTPGGYDPTDEFSFDTQDLAVVAGDGSYQQQPRYFIGLPDSPAGFNGPDEFSFFL
>NZ_CP053452.1|WP_171476127.1|5509921_5510446_-|inorganic-diphosphatase
MIPPGTGEAAVVNVIVEIPKGKRNKFEVDKVTGLIKLDRYLYSSAVYPGDYGFIPQTLAEDGDPLDALVMVNEATFSGCLIEARVVGIFRMKDKGANDFKVLAVPHKDPLFSHIKRLEDVPTHFVREVEFFFTTYKQLEGVSVEPLGWASGEEGTAEVRLSVDRFRASLGNVRD
>NZ_CP053452.1|WP_171472860.1|5510608_5511628_+|aldose-1-epimerase
MPRAIAAIVLLVVTGPPARAEDFPHAVIKNEKLTFTLYDADASKGFYRGTRFDHAGVFGSVEFAGHKVFGPWKGTHDPANHDDIVGPCEEFGIDTPLGYDAAKAGGTFLKIGVGELEKPKEAKYSFAHKYKIVAPVVWERRPIDPEADFVGEIPRGARDQIWRTGQKANGYAYSYSKVVYAAGATIGLTHRLKNTGEKRIVTDCYNHNFFNVDGDPVGPNYSLVFSFEPKAKDLKGKFGDLVELKGNEFRFKDTLPNGADLMATLTGFDAKEKKPWFEMRHAPSGVRVKVECDYPLAKFNVWGIKPTICPEPYLAIDLKPGEEVKWSVTYTFTHDLPKK
>NZ_CP053452.1|WP_171472861.1|5511693_5512131_-|Hsp20/alpha-crystallin-family-protein
MTRNRRHPFGVLLNEVSAVGDEFAAMFGRLSQPEAAAFPLNVWQDENAIYVEGDLPGVDRATLDVTVTGGDQLVIRAERPAPNPGEGAAWLRRERPVGRFARALALPLTVDAEKVEATYTNGVLKVTLPKIAAVKPRTVPVKVGE

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Crispr_ID: NZ_CP053452_25

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053452_25

5863324-5863455

Orphan

Consensus_repeat	Method
GAGACCAAGGAAGCCGCGCTGGTGGCGCGCGAGGCCGAAATCGCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP053452_25

>merge|NZ_CP053452|25|5863324-5863455|CRISPRCasFinder
GAGACCAAGGAAGCCGCGCTGGTGGCGCGCGAGGCCGAAATCGCGACCCGTGCGGTGGAGAGGTTGGCGCAGCGCGAATCGGCACTGGAGACCAAGGAAGCCGCCCTGGTGGCGCGCGAGGCCGAAATCGCG

>NZ_CP053452|25|25|5863324-5863455|CRISPRCasFinder
GAGACCAAGGAAGCCGCGCTGGTGGCGCGCGAGGCCGAAATCGCG	ACCCGTGCGGTGGAGAGGTTGGCGCAGCGCGAATCGGCACTG
GAGACCAAGGAAGCCGCCCTGGTGGCGCGCGAGGCCGAAATCGCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053452.1\|WP_171473148.1\|5855917_5857000_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237191
NZ_CP053452.1\|WP_171473164.1\|5876450_5878649_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274350
NZ_CP053452.1\|WP_171473158.1\|5868898_5871100_+\|protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP053452.1\|WP_171473146.1\|5854195_5854408_+\|carbon-storage-regulator	unknown	unknown	gnl\|CDD\|376847
NZ_CP053452.1\|WP_171473159.1\|5871145_5871892_-\|flagellar-hook-basal-body-complex-protein	unknown	unknown	gnl\|CDD\|183687
NZ_CP053452.1\|WP_171473162.1\|5874913_5875936_-\|CHAT-domain-containing-protein	unknown	unknown	gnl\|CDD\|378942
NZ_CP053452.1\|WP_171473149.1\|5857121_5858393_+\|YkgJ-family-cysteine-cluster-protein	unknown	unknown	gnl\|CDD\|308985
NZ_CP053452.1\|WP_171473147.1\|5854751_5855720_+\|isoaspartyl-peptidase/L-asparaginase	unknown	unknown	gnl\|CDD\|271335
NZ_CP053452.1\|WP_171473160.1\|5872570_5873554_-\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381305
NZ_CP053452.1\|WP_171473152.1\|5861451_5861622_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171473151.1\|5860294_5861455_-\|DUF2330-domain-containing-protein	unknown	unknown	gnl\|CDD\|370813
NZ_CP053452.1\|WP_171473163.1\|5875932_5876376_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171476138.1\|5858540_5859044_+\|cupin-domain-containing-protein	unknown	unknown	gnl\|CDD\|380376
NZ_CP053452.1\|WP_171473157.1\|5866758_5868711_-\|PAS-domain-S-box-protein	unknown	unknown	gnl\|CDD\|237425
NZ_CP053452.1\|WP_171473153.1\|5861618_5862605_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223730
NZ_CP053452.1\|WP_171473156.1\|5865413_5866598_-\|HDOD-domain-containing-protein	unknown	unknown	gnl\|CDD\|370050
NZ_CP053452.1\|WP_171473161.1\|5873591_5874626_-\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381317
NZ_CP053452.1\|WP_171473145.1\|5852972_5853317_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171473155.1\|5863759_5865184_-\|DUF1501-domain-containing-protein	unknown	unknown	gnl\|CDD\|369346
NZ_CP053452.1\|WP_171473150.1\|5859053_5860250_-\|DUF2330-domain-containing-protein	unknown	unknown	gnl\|CDD\|370813

Protein	Function_ID	Function_description	E-value
NZ_CP053452.1\|WP_171473148.1\|5855917_5857000_+\|hypothetical-protein	gnl\|CDD\|237191	PRK12757, PRK12757, cell division protein FtsN; Provisional.	0.00283489
NZ_CP053452.1\|WP_171473164.1\|5876450_5878649_-\|hypothetical-protein	gnl\|CDD\|274350	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.	0.000493569
NZ_CP053452.1\|WP_171473158.1\|5868898_5871100_+\|protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	4.77346e-98
NZ_CP053452.1\|WP_171473146.1\|5854195_5854408_+\|carbon-storage-regulator	gnl\|CDD\|376847	pfam02599, CsrA, Global regulator protein family. This is a family of global regulator proteins. This protein is a RNA-binding protein and a global regulator of carbohydrate metabolism genes facilitating mRNA decay. In E. coli CsrA binds the CsrB RNA molecule to form the Csr regulatory system which has a strong negative regulatory effect on glycogen biosynthesis, glyconeogenesis and glycogen catabolism and a positive regulatory effect on glycolysis. In other bacteria such as Erwinia caratovara RmsA has been shown to regulate the production of virulence determinants, such extracellular enzymes. RmsA binds to RmsB regulatory RNA.	5.60596e-24
NZ_CP053452.1\|WP_171473159.1\|5871145_5871892_-\|flagellar-hook-basal-body-complex-protein	gnl\|CDD\|183687	PRK12693, flgG, flagellar basal body rod protein FlgG; Provisional.	3.23304e-74
NZ_CP053452.1\|WP_171473162.1\|5874913_5875936_-\|CHAT-domain-containing-protein	gnl\|CDD\|378942	pfam12770, CHAT, CHAT domain. These proteins appear to be related to peptidases in peptidase clan CD that includes the caspases. This domain has been termed the CHAT domain for Caspase HetF Associated with Tprs. This family has been identified as a sister group to the separins.	5.02456e-54
NZ_CP053452.1\|WP_171473149.1\|5857121_5858393_+\|YkgJ-family-cysteine-cluster-protein	gnl\|CDD\|308985	pfam03692, CxxCxxCC, Putative zinc- or iron-chelating domain. This family of proteins contains 8 conserved cysteines. It has in the past been annotated as being one of the complex of proteins of the flagellar Fli complex. However this was due to a mis-annotation of the original Salmonella LT2 Genbank entry of 'fliB'. With all its conserved cysteines it is possibly a domain that chelates iron or zinc ions.	1.73137e-14
NZ_CP053452.1\|WP_171473147.1\|5854751_5855720_+\|isoaspartyl-peptidase/L-asparaginase	gnl\|CDD\|271335	cd04513, Glycosylasparaginase, Glycosylasparaginase and similar proteins. Glycosylasparaginase catalyzes the hydrolysis of the glycosylamide bond of asparagine-linked glycoproteins. This enzyme is an amidase located inside lysosomes. Mutation of this gene in humans causes a genetic disorder known as aspartylglycosaminuria (AGU). The glycosylasparaginase precursor undergoes autoproteolysis through an N-O or N-S acyl rearrangement of the peptide bond, which leads to the cleavage of a peptide bond between an Asp and a Thr. This proteolysis step generates an exposed N-terminal catalytic threonine and activates the enzyme.	4.70099e-106
NZ_CP053452.1\|WP_171473160.1\|5872570_5873554_-\|aldo/keto-reductase	gnl\|CDD\|381305	cd19079, AKR_EcYajO-like, Escherichia coli YajO and similar proteins. Escherichia coli YajO is the prototype of this family. It is an uncharacterized aldo/keto reductase family oxidoreductase.	0
NZ_CP053452.1\|WP_171473151.1\|5860294_5861455_-\|DUF2330-domain-containing-protein	gnl\|CDD\|370813	pfam10092, DUF2330, Uncharacterized protein conserved in bacteria (DUF2330). Members of this family of hypothetical bacterial proteins have no known function.	2.78129e-20
NZ_CP053452.1\|WP_171476138.1\|5858540_5859044_+\|cupin-domain-containing-protein	gnl\|CDD\|380376	cd06121, cupin_YML079wp, Saccharomyces cerevisiae YML079wp and related proteins, cupin domain. This family includes eukaryotic, bacterial, and archaeal proteins homologous to YML079wp, a Saccharomyces cerevisiae cupin-like protein of unknown function that structurally resembles plant seed storage and ligand-binding proteins (canavalin, glycinin, auxin binding protein) as well as the bacterial RmlC epimerase. YML079wp is non-essential in yeast and localizes to the nucleus and cytoplasm. The presence of a hydrophobic ligand within a well-conserved binding pocket inside the cupin beta-barrel and sequence similarity with bacterial epimerases suggests a possible biochemical function for YML079wp and its homologs. Also included in this family are Shewanella oneidensis So0799, Agrobacterium fabrum Atu3615 and Branchiostoma belcheri Bbduf985. Proteins in this family belong to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold and forms a homodimer.	5.52918e-75
NZ_CP053452.1\|WP_171473157.1\|5866758_5868711_-\|PAS-domain-S-box-protein	gnl\|CDD\|237425	PRK13557, PRK13557, histidine kinase; Provisional.	1.65523e-99
NZ_CP053452.1\|WP_171473153.1\|5861618_5862605_-\|alpha/beta-hydrolase	gnl\|CDD\|223730	COG0657, Aes, Esterase/lipase [Lipid metabolism].	5.80217e-34
NZ_CP053452.1\|WP_171473156.1\|5865413_5866598_-\|HDOD-domain-containing-protein	gnl\|CDD\|370050	pfam08668, HDOD, HDOD domain.	9.98339e-54
NZ_CP053452.1\|WP_171473161.1\|5873591_5874626_-\|aldo/keto-reductase	gnl\|CDD\|381317	cd19091, AKR_PsAKR, Polaromonas Sp. aldo-keto reductase and similar proteins. The prototype of this family is an uncharacterized aldo-keto reductase from Polaromonas sp.	0
NZ_CP053452.1\|WP_171473155.1\|5863759_5865184_-\|DUF1501-domain-containing-protein	gnl\|CDD\|369346	pfam07394, DUF1501, Protein of unknown function (DUF1501). This family contains a number of hypothetical bacterial proteins of unknown function approximately 400 residues long.	2.9557e-163
NZ_CP053452.1\|WP_171473150.1\|5859053_5860250_-\|DUF2330-domain-containing-protein	gnl\|CDD\|370813	pfam10092, DUF2330, Uncharacterized protein conserved in bacteria (DUF2330). Members of this family of hypothetical bacterial proteins have no known function.	1.79082e-18

>NZ_CP053452.1|WP_171473153.1|5861618_5862605_-|alpha/beta-hydrolase
MARFFLAVAFGCAALTFVIAAPPAAPDAPKAKAAGAAPGPVPGTEPPTGAPGPVTVERGVLYDTIEKQKLYLDIARPKGDGPHPCVVILHGGAWIGGSRKDVSVGDKGKNGKPEPSILEDVAARGYVAVAPSYRLAPRFPFPAQIQDARAAVRFLRANAKTYGIDPAKFAAAGFSAGGHLALLLGLADKVDGWDAGGNRDQSSRVQCVVDYFGPTDLSLYAVSPAVEDAYMVPVFGKAVKTDPEVYKKASPISYVSKTAPPVLVLHGTFDLIVPIIHSETLLKKLTDAGATAEMITVRAEGHGWSGANFTRTLNDSLKFLDAHLKGKK
>NZ_CP053452.1|WP_171473152.1|5861451_5861622_-|hypothetical-protein
MSATEQKTAGGRVAALVWLFIAVALLTLPLFAHGCHGDDVDHEPLLVPVRVNAESP
>NZ_CP053452.1|WP_171473151.1|5860294_5861455_-|DUF2330-domain-containing-protein
MNRLPCAVALLAIAVWIASRPGDAAGCGGAYRPGERVDVADETALIVWDARTHTQHFIRRATFLSTGYDFGFLVPTPNRPELAESSDDLFTELAELTAPKVEYRTVNGLGLACGGGSAPSPDGGRFLPSGGVVVLEQKRVGGFDAAVLAFRPGTKNDPAAGAAELAAWLKSNDYVFTPGLLAWLEPYVRDGWVVTAFKIAGEPKPQDTPAPKSGSAPTGKTAINLGARPVRMSFKTDRPFFPYREPEDQRDEQAKSVPRLLRVFVAAPSRFAGKLGDGTKAWPGKTVWAGPVETPQWGDVFRHAQMTKAPVTDGWWLTEFEDRSMPRPGTDEVYFEPSPDLSPVYRRPAIVTVERTPVWLGVLCCGTPVAFLVLCLVGLRRLVRSK
>NZ_CP053452.1|WP_171473150.1|5859053_5860250_-|DUF2330-domain-containing-protein
MNRFSFALVVALAAGALAAVPDDATGCAAVVHLHNGQRVDTADESALIVWDEKTKTEHFVRRASFRSTGYDFGFLVPTPNRPHLDVASDDLFGDLATITAPKVERREVVTEVEREFSLGCAAEKKSFMYVGSAVKPPSDGVQVLEQKRIGNYDVTVLAFHHSDGDTPEGGARLLGEWLAKHGYERSPAIDKWLAKYVRDQWCITAFKIAAPDKPNETKPPAGRHDLQAKPVRMSFRAEKPFYPYREPEPEPGVQPSGESRFLRVFFAAQGRYAGQLGDGSKAWPGQTVWAGPGEEASWAGVFQKAKLSDAPKDGKPVASPKAADGWWLTEFEDRSSPRPGIDEVYFEPSADQSPVARAPIIVETARTVEVTPWRHVAVYFGVPAVLVGFLVWRRFQRG
>NZ_CP053452.1|WP_171476138.1|5858540_5859044_+|cupin-domain-containing-protein
MTADDVIRLLNLQPHPVEGGFFRETYRAAATLPAAALAAHGADRSVCTAIYYLLKPGHVSELHVLPGDEVFHFYLGGPVRMLQLWPDGSGREVVLGSDIAAGEVPQLVVPGGVWQGTRLVGDTGFALLGCTVAPGFDYADYRGASRAELTAKWPAVAAQIAALTPRG
>NZ_CP053452.1|WP_171473149.1|5857121_5858393_+|YkgJ-family-cysteine-cluster-protein
MQVRSLTVLQNWDCHTCGDCCRSYAVPVTAEERERIEGQGWEKLPDFQGVPFFVPRGDEYYLNNRADGGCVFLGADNLCRIHGQFGSAAKPLACRIYPFLLVPAGDHWNVGVRMACPSAAENKGRPLTDQLADAREYAAFFEATAAKGALEAPPPPLYGSNVVPWGDVTRIAAAVSKLLANPADPFERRWRKVLFIVGMLRKATFDGGGDTKKVVTGGRLSEMLHVMGEAAEDEEPKAAGDVKRPGWAGRTVFRQLVAVFSRKDHGMEKGTAQRGAVSRFWSAVRFAGGRGSVPKVHAVLPDAVPFAAGEVPLGAPTAAATALLTRWHRGKVESLQFCGAPNFGLSVWEGLESLALTFPVAMWLARVLIAGGRTPDDAVTRAVRMVDDNFGFNPLLGSARQKFALRLLANRGDLPRLVAWYGR
>NZ_CP053452.1|WP_171473148.1|5855917_5857000_+|hypothetical-protein
MSLAVVRCPECRGESRVTTEALGHMVGCPRCQSPFVAEEEIPVVQPVTRSAPPRPVTPVTPRRARPDPQPDLPRSAPTASPAEAPVEIPDPEHDPHLPPVAGLPVSVLVGLALLPFGIPLLWRVAPFLTGRDAQLSLAVPVALAAAAAALCLGVVYTIDWTASTRIKGVLMLVGLAYLTAAGLFYLKKDMMDRVRALGGDPNEWNYVSLNDGKCGVLMPGRAEPDRLFQPLAGLVQMTEVRRARTATDDPEVPGYVYYVAVSRANPDPIKPDNAWFARVGAKLKNAGGKLLGDDGGAEVKHQDVPGRQWEFELDGGQTRIVRVFVIKGRVYYLSAEGPRLTPDHEDYGAPFFEKFYVTIN
>NZ_CP053452.1|WP_171473147.1|5854751_5855720_+|isoaspartyl-peptidase/L-asparaginase
MPEPITIATWPFGKTAVEAAMKVLARGEPALDAALAGAQAVEDDTSIRNSVGFGSLPDRLGRLTLDACVMDGRTLACGSVACVEHIRHPAALARRVMEKTPHVMLVGDGAKWFALQQGFPLEVPYTAESIKEWVDAHPDLKKKAEKAKKEPARADGASEINLQWGAPPAPGSEFNHDTVTVLSLDKKGHLGGVCTTSGLAYKLPGRVGDSPLIGAGLYVDDEAGAAGGTGVGEEIIRIGGSLFIAEQIRAGKSPQEACELACKRANAAAGRRGVHPARVAFLALDPKGNVGAACTEKADFKYAVGRGEKVELLQAKEIGPKA
>NZ_CP053452.1|WP_171473146.1|5854195_5854408_+|carbon-storage-regulator
MLVLSRKLGEKIFIGDNICITVVDIDRGKIRLGIEAPRDVPIYRQELLPLNQQQARSDAAAGQSGLPTVS
>NZ_CP053452.1|WP_171473145.1|5852972_5853317_+|hypothetical-protein
MNPICRHCTKSKVNRPRGLCWSCYYTPGVKELYPSTSKYARRGVGNFTGNAPLPASPTTAAPGTPEKLAVLEQRAKMKQAIFHPADARYEGDPRPLEFLKSKSRSAAGAVCCVA
>NZ_CP053452.1|WP_171473155.1|5863759_5865184_-|DUF1501-domain-containing-protein
MNAHTPAARTRREFLAAGGGLGGIALNALLQSEARGADAPRRGNPLAAKKPHFEPKAKRVIFLFMVGGPSQMDLFDPKPGLEKWAGKPLPESTGRPRSQFTSGQEVVLASTRKLAKRGKSGVEISDLLPTLATCADDICFLRACWCTNTVHAPAMYELHSGRTLMGWPSLGSWVTYGLGSVTENLPAYCVMPQPEGVPEGGAPCWSSAFLPPVYQGTLLRRGPNPIINLKPPADTGAEQNRRQFDLVQRLNAAQAGGDAELEARTASYELAFKMQQHAPEAVDLAKETAATKAEYGLDDARTADFGTRLLLARRLVERGVRFVSVYSGGGPLVTQWDAHDDVNANHEKMCGHVDKPIAALLRDLKRRGLLKDTLVVWCSEFGRTPNSQGGKGRDHNPHGYTMWLAGGGARGGTVVGATDEFGLKAVEDAVSVNDFHATVLHLLGLDHEALTFRHSGRDERLTDVGGFVIDKAVV
>NZ_CP053452.1|WP_171473156.1|5865413_5866598_-|HDOD-domain-containing-protein
MSCRVLFVSDDVNAQRAFRLSFAPLRREWDVTVARGGADAMRRLDGPGFDALVADAHLTSVGCADLLLEVRRRHPPTARIVLADRREPDELVRLLALTHRVLQKPYDPTELQNAIQRAYSLRELLHSPSLASVVGRLASVPALSTLYSRIADELMTPDYSLSAVGDLVAQDLGIAAKMLQMANSALIGLRRPATTPNQAVKVLGADLTRTLVLAADLFSRYNPNSLRPFSIEALWEHSQAVAGLAGAIAASERHDDRLSRESALAGLLHDIGRLTLASQLSGPYREVMNIIRVEGLSAADAERRVLGTSHAEVGAYLLGLWGLPDAIVEAVAWHHNPGGCPGGAFTPLTAVHAADAIVRAGEGAKPDAEYLTRLGLADHWGRWVELRERPKVTA
>NZ_CP053452.1|WP_171473157.1|5866758_5868711_-|PAS-domain-S-box-protein
MTDRFEQRPPGRPAPGRSAEEERPGAGALFRLLFDAHPAPMWAFDEETLRFLAVNEAAAIRYGYAREELLGLTVRDVLPTAEADRLAQELVCGGPDANETVSWEHRTKAGALLPLEVVVSPFENAGRPAWLVVGTDATERRRAEAALRESEERLRNVLEHIPCGVFWKDRASIYLGCNDRLARDRGLAVAGEVIGRTDDDLTAVPAEADASRASDRLVIDSGTPLLDAEETCTLADGKAVTLLTSRVPMRDPAGRVIGVLGVYLDVTERKRLEAQLRQSQKMEAIGRLAGGVAHDFNNLLTIISGNVHLIQHLPPGDPEFPQLLDDVRDAAERAAALTRQLLTFSRKQPTRPEVIDLNEVVTGLVSMLRRLIGSGIVIRTPLAPGPVRVRADRGQLEQVLMNLAVNAKDAMPDGGTLTVGTAELAGPPRTARLTIADTGIGMTDEVKRHLFEPFFTTKDVGKGTGLGLATVYGIVQQAGGTVEVESAPGAGAAFTIRLPWCEATPKSSLLMPSPVLFTRSVSGQRSVLLVEDEDRVRKLVRYTLEGQGYTVTEAAGGEAALRLLAPDRRVDLLLTDLVMPGIDGRELATRVRALRPDVGVVFVSGFVPDHRRLEGMAGALFLPKPFSPLDLIKTVERALRHVKPAPAGSA
>NZ_CP053452.1|WP_171473158.1|5868898_5871100_+|protein-kinase
MSSSSFIVLPVDRDTEANRELDAPSDWGATRGCLTRLIEQWVVLPEEWDELPPDLRSQILRPDAPDVLGQLVDNHLLTQFQADKVREGGEGELVLGHYRLLDVIGRGGMGTVYRAEHLHLRRQVAVKVMARTAETNPRLLHRFYGEARAVAKLQHPNIVGCLDAGRHTPPGAGPRDYYVMELIPGADLQATVTAHGPLPPSRACDLFRQIAEALAEAHRFGLVHRDIKPGNILITPDWRAKLLDFGLALRPQNRMTEPGLVLGTIGYMAPEQAQDAHLVDGRADLFSLGATMYWALTGREPFPETGHLLRDLTTRLNAPALDPRRVRPELPEELAAVVLKLTDRDPERRYQSARAVAATLAGVGRWASLRDADDRPTQPRVLIVEDDPRLRRLMVGLLRDCTCVEAGDGKTALAELEKAAFDLLVLDVNLPEMSGPDLLARVRADDKWRERTRTLMVSGDLPSESLGGYLMTGADDYLEKPFLPPAFQARARALLGRSAPPTGSRPATAPDPPPRAPDDANKVAATDPLAFGITRLLEEIGVILRGYHDRCGRYVRALAAAAPDEGEYARLRNPAYVEMLVRAAPVHDAGMLVLPNSILLKPAALDPEEQAIVQQHTVIGAQVIADTAQRWPLAVPELGLAGEIVRSHHERWDGGGYPDGLAGTHIPLAARVVAITSVYEMLRTKRPHRPALSHNQVTRLLVTDSPGEFDPTLLGAFAASARKFDEIFQSVKR
>NZ_CP053452.1|WP_171473159.1|5871145_5871892_-|flagellar-hook-basal-body-complex-protein
MAASTYLDTAGNNIANSNTTGYKTQTIAFQDLFYTGLAPGTATSQNTRSPTGAQIGSGVNVSSIGGLFTQGTLAQTGRQFDLAISGQGFFPVSLGSGQTGYTRAGNFTTNANGQLVSSDGFLLGNGSIKVPSNASAVTVSGDGTVTATTPAGQQVLGTLTLTQFTNPEGLTRIGDTTFVAGPDSGAPVTGAPGTGGLGTITQGSLEQSNVDLPTELVNLIIAQSSFDYNTNALQVENETLQATVALIP
>NZ_CP053452.1|WP_171473160.1|5872570_5873554_-|aldo/keto-reductase
MEYINLGRTGTKVSRLCLGCMTYGSPQWRAWVLDEEQSRPFFRRAWEAGINFFDTADMYSDGASEEVLGRALRDLAVPREQVVIATKVFHPTGATPNERGLSAKHIRHAIDNSLKRLNLDYVDLYQIHRFDPTTPVEETLDALDATVRAGKVLHIGASSMFAWQLAKMLHASDRLGLAKFVTMQNHYNLVYREEEREVNPLCRDAGLGLLPWSPLARGFLAGNRKAKGEGETSRARTDDFAHKLYYQDADFAVVDRVTELAQKRGVPNAQVALAWLLHQPGVTAPIIGASKPHHLDDALAAVELKLDAGELKALEEPYRPHPVLGHT
>NZ_CP053452.1|WP_171473161.1|5873591_5874626_-|aldo/keto-reductase
MEYRQLGRSGFKVPVLSLGTGTFGGGTEFFKAWGETDAKGAAHLIDVCLDAGLALFDSADIYSDGLAEEVLGAAIKGRRDKVLISTKATFRSGSGPNDVGSSRFHLVRSVEAALKRLGTDYIDLFQMHGFDATAPVEETLSALDDLVRAGKVRYIGCSNFSGWHLMKSLAVSERYGWSRYVAHQAYYSLIGRDYEWELMPLGLDQGVGAVVWSPLGWGRLTGKVRRGQPLPKTSRLNSQLSNEKGPPVADEHLYRVVDALDAVARETGKTVPQVALNWLLQRPTVATVIIGARDENQLRDNLGAVGWNLAPAHVAQLDAASAVTLAYPYWHQRGFTERNPPPVA
>NZ_CP053452.1|WP_171473162.1|5874913_5875936_-|CHAT-domain-containing-protein
MTGRLVAQYLRQIADPEFSQKRGINIVSRAPGASRPAAPEVLGDAVLPAALREVIRSSGAKRVVLIPDGALHKIPFECLLLPNGATPKYALDELPPVCYGPSIAALAVVLGRPRQLDGGATLLTVGDPAYPDAKGNTLASGALPRLPFTAVESKRVRQFFPADRVTALEGGAATEQNVAAALPGKRFVHLAAHGFSDEAFGNAFAAVALTPPPRGREEPGNDGFLTLHEITRLKLTGCELTVLSACVTNVGPQRPMEAGVTLAGAFLGAGSRGVMASCWSVDDAATSELMAAFFGGIRPAAGKAASYPEALKAARIAVRSKPGWEAPFYWAPFVYLGPPD
>NZ_CP053452.1|WP_171473163.1|5875932_5876376_-|hypothetical-protein
MALPAGATEGPAAKKLFADLEAAQKEYTEAWREIANADPLTRVLTDPGFAEAALAQVRREAHNSGGVLLVYMIGRDESFAVLSTDPSAPPQVFRLSVARGVAESIGDAPPGEAVARAGFRGIVIKPTGKQPDRPAAAAAEFARSRTK
>NZ_CP053452.1|WP_171473164.1|5876450_5878649_-|hypothetical-protein
MFPTAVVLVLALAAPPADPAEAFQKAESLYASDRFGEAEPLFESALRSDDRFLKRQAYNRLMNLYVRSGRPDKAIRLAGPYREWLKGLGDATGLAGLDLLTGECRLELGYTEEADKLLGAALAADPPLPPDRRLEALRLRGEVARQHKDAAEKERWAELERAARDVAKDAVRVDDTPARITAGRYLAEALLRRGDIDAALAALAAFPELHDKLDDPLGRSDTQRQRAKLLVKQGQYPQAAALFKEALDLQRTFRPKRRLVAGDILAEWSAAAVGRPEGAKLRDEAAIEYRAALDAPTDTPDAGGPLAAFIRLQSLTRSAKQFRLALDVARTAGERWAGDALVDGRLNSDRGGLELMTSAYQTARKSLLVALADLDAADPPNLRALPKVLVNLATAELACDAPERADPLLDRCAELYRKHGLAADAVRAERDYLSGVTAARRGDFARAMERFRSGLALCETVGRSADPVRFNLWLNVALIHKEQGDATAAGDALQNASAVLAGFSEPDDLSGALIDAVRADLFLSQGKVGPALALVPNLEATCTKHGYRSGYLWATARHVRALDLLTRKDVPGAEAVWTGLAEAQRKEGHVLLARTLNFLGVCAELRGNTADATKQFEEARAFQADRPRCPPVTRAITLWRLAALADRARPHGRREETARRGVRRGRPRAAEHVRRGRTARPVLRAVRPGVRTARGVVRPRRGRGGVAPRGTAEPQPHAPRPDARDRRGPARR

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Crispr_ID: NZ_CP053452_26

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053452_26

6434624-6435603

Unclear

Consensus_repeat	Method
GCTTCAATTCGGCCACGGCGTTGAGCCGTGGAGAAC	CRT
GTTCTCCACGGCTCAACGCCGTGGCCGAATTGAAGC	PILER-CR
GCTTCAATTCGGCCACGGCGTTGAGCCGTGGAGAAC	CRISPRCasFinder

13 spacers

cas3,csb2gr5,cas7,cas2,cas1

The CRISPR arrays of NZ_CP053452_26

>merge|NZ_CP053452|26|6434624-6435603|CRT,PILER-CR,CRISPRCasFinder
TCGTGACCCGCACCATCAAGAAGAGCCGTGGAGAACGGCGCCGGCCCACTGTGCGGTCCCGGTCACGCACGAAGCTTCAATTCGGCCACGGCGTTGAGCCGTGGAGAACGTAATCATGCTCGACCCACGCACCGGTCTCCCCACAGCTTCAATTCGGCCACGGCGTTGAGCCGTGGAGAACCATCCCCCGCCCGCCCCTTCAGAGCGTCACGTACCTGCTTCAATTCGGCCACGGCGTTGAGCCGTGGAGAACGCGCTCGCCATCGCACCGGTGAAGATCGGCATCGACGCGCTTCAATTCGGCCACGGCATTGAGCCGTGGAGAACGCAGGCGGCGTGGGGCACCGGCGCCCCGTACCTGCTGCTTCAATTCGGCCACGGCGTTGAGCCGTGGAGAACGATGAAGTTCAGTGACAAGGCGACCGACCGGCACCTGCTTCAATTCGGCCACGGCGTTGAGCCGTGGAGAACGGTCAGTCCTCAGACAAACGTCACCCACGTTTGATGCTTCAATTCGGCCACGGCGTTGAGCCGTGGAGAACCTTGGCCACGCCGTTCAGTGCCTCCGTCACGGCGTTCGGCTTCAATTCGGCCACGGCGTTGAGCCGTGGAGAACGCTCGACGCGGTGGAGGCGGCGACCCCGGATCAACCGCGCTTCAATTCGGCCACGGCGTTGAGCCGTGGAGAACCCCCAGTCTCCCGACCGCGATGGGATCTTCGCGGAGATGCTTCAATTCGGCCACGGCGTTGAGCCGTGGAGAACGTGGGACCGCTTCCCATCAGGTGGCACACAGTGGCGCTTCAATTCGGCCACGGCGTTGAGCCGTGGAGAACGGGGCGGTTCCGGAACGCGGTCCGGCGCCTGGCGGGGCTTCAATTCGGCCACGGCGTTGAGCCGTGGAGAACATGTCGAGCGAGCGGCACGAGAAAACACTCGAGTCGCGCTTCAATTCGGCCACGGCGTTGAGCCGTGGAGAAC

>NZ_CP053452|26|3|6434624-6435603|CRT
TCGTGACCCGCACCATCAAGAAGAGCCGTGGAGAAC	GGCGCCGGCCCACTGTGCGGTCCCGGTCACGCACGAA
GCTTCAATTCGGCCACGGCGTTGAGCCGTGGAGAAC	GTAATCATGCTCGACCCACGCACCGGTCTCCCCACA
GCTTCAATTCGGCCACGGCGTTGAGCCGTGGAGAAC	CATCCCCCGCCCGCCCCTTCAGAGCGTCACGTACCT
GCTTCAATTCGGCCACGGCGTTGAGCCGTGGAGAAC	GCGCTCGCCATCGCACCGGTGAAGATCGGCATCGACGC
GCTTCAATTCGGCCACGGCATTGAGCCGTGGAGAAC	GCAGGCGGCGTGGGGCACCGGCGCCCCGTACCTGCT
GCTTCAATTCGGCCACGGCGTTGAGCCGTGGAGAAC	GATGAAGTTCAGTGACAAGGCGACCGACCGGCACCT
GCTTCAATTCGGCCACGGCGTTGAGCCGTGGAGAAC	GGTCAGTCCTCAGACAAACGTCACCCACGTTTGAT
GCTTCAATTCGGCCACGGCGTTGAGCCGTGGAGAAC	CTTGGCCACGCCGTTCAGTGCCTCCGTCACGGCGTTCG
GCTTCAATTCGGCCACGGCGTTGAGCCGTGGAGAAC	GCTCGACGCGGTGGAGGCGGCGACCCCGGATCAACCGC
GCTTCAATTCGGCCACGGCGTTGAGCCGTGGAGAAC	CCCCAGTCTCCCGACCGCGATGGGATCTTCGCGGAGAT
GCTTCAATTCGGCCACGGCGTTGAGCCGTGGAGAAC	GTGGGACCGCTTCCCATCAGGTGGCACACAGTGGC
GCTTCAATTCGGCCACGGCGTTGAGCCGTGGAGAAC	GGGGCGGTTCCGGAACGCGGTCCGGCGCCTGGCGGG
GCTTCAATTCGGCCACGGCGTTGAGCCGTGGAGAAC	ATGTCGAGCGAGCGGCACGAGAAAACACTCGAGTCGC
GCTTCAATTCGGCCACGGCGTTGAGCCGTGGAGAAC

>NZ_CP053452|26|3|6434697-6435603|PILER-CR
GCTTCAATTCGGCCACGGCGTTGAGCCGTGGAGAAC	GTAATCATGCTCGACCCACGCACCGGTCTCCCCACA
GCTTCAATTCGGCCACGGCGTTGAGCCGTGGAGAAC	CATCCCCCGCCCGCCCCTTCAGAGCGTCACGTACCT
GCTTCAATTCGGCCACGGCGTTGAGCCGTGGAGAAC	GCGCTCGCCATCGCACCGGTGAAGATCGGCATCGACGC
GCTTCAATTCGGCCACGGCATTGAGCCGTGGAGAAC	GCAGGCGGCGTGGGGCACCGGCGCCCCGTACCTGCT
GCTTCAATTCGGCCACGGCGTTGAGCCGTGGAGAAC	GATGAAGTTCAGTGACAAGGCGACCGACCGGCACCT
GCTTCAATTCGGCCACGGCGTTGAGCCGTGGAGAAC	GGTCAGTCCTCAGACAAACGTCACCCACGTTTGAT
GCTTCAATTCGGCCACGGCGTTGAGCCGTGGAGAAC	CTTGGCCACGCCGTTCAGTGCCTCCGTCACGGCGTTCG
GCTTCAATTCGGCCACGGCGTTGAGCCGTGGAGAAC	GCTCGACGCGGTGGAGGCGGCGACCCCGGATCAACCGC
GCTTCAATTCGGCCACGGCGTTGAGCCGTGGAGAAC	CCCCAGTCTCCCGACCGCGATGGGATCTTCGCGGAGAT
GCTTCAATTCGGCCACGGCGTTGAGCCGTGGAGAAC	GTGGGACCGCTTCCCATCAGGTGGCACACAGTGGC
GCTTCAATTCGGCCACGGCGTTGAGCCGTGGAGAAC	GGGGCGGTTCCGGAACGCGGTCCGGCGCCTGGCGGG
GCTTCAATTCGGCCACGGCGTTGAGCCGTGGAGAAC	ATGTCGAGCGAGCGGCACGAGAAAACACTCGAGTCGC
GCTTCAATTCGGCCACGGCGTTGAGCCGTGGAGAAC

>NZ_CP053452|26|26|6434697-6435603|CRISPRCasFinder
GCTTCAATTCGGCCACGGCGTTGAGCCGTGGAGAAC	GTAATCATGCTCGACCCACGCACCGGTCTCCCCACA
GCTTCAATTCGGCCACGGCGTTGAGCCGTGGAGAAC	CATCCCCCGCCCGCCCCTTCAGAGCGTCACGTACCT
GCTTCAATTCGGCCACGGCGTTGAGCCGTGGAGAAC	GCGCTCGCCATCGCACCGGTGAAGATCGGCATCGACGC
GCTTCAATTCGGCCACGGCATTGAGCCGTGGAGAAC	GCAGGCGGCGTGGGGCACCGGCGCCCCGTACCTGCT
GCTTCAATTCGGCCACGGCGTTGAGCCGTGGAGAAC	GATGAAGTTCAGTGACAAGGCGACCGACCGGCACCT
GCTTCAATTCGGCCACGGCGTTGAGCCGTGGAGAAC	GGTCAGTCCTCAGACAAACGTCACCCACGTTTGAT
GCTTCAATTCGGCCACGGCGTTGAGCCGTGGAGAAC	CTTGGCCACGCCGTTCAGTGCCTCCGTCACGGCGTTCG
GCTTCAATTCGGCCACGGCGTTGAGCCGTGGAGAAC	GCTCGACGCGGTGGAGGCGGCGACCCCGGATCAACCGC
GCTTCAATTCGGCCACGGCGTTGAGCCGTGGAGAAC	CCCCAGTCTCCCGACCGCGATGGGATCTTCGCGGAGAT
GCTTCAATTCGGCCACGGCGTTGAGCCGTGGAGAAC	GTGGGACCGCTTCCCATCAGGTGGCACACAGTGGC
GCTTCAATTCGGCCACGGCGTTGAGCCGTGGAGAAC	GGGGCGGTTCCGGAACGCGGTCCGGCGCCTGGCGGG
GCTTCAATTCGGCCACGGCGTTGAGCCGTGGAGAAC	ATGTCGAGCGAGCGGCACGAGAAAACACTCGAGTCGC
GCTTCAATTCGGCCACGGCGTTGAGCCGTGGAGAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053452.1\|WP_171473562.1\|6441312_6442533_-\|type-I-U-CRISPR-associated-protein-Cas7	cas7	cd09738_cas7_CAS-I-U	gnl\|CDD\|378223
NZ_CP053452.1\|WP_171473560.1\|6435844_6439681_-\|type-I-U-CRISPR-associated-helicase/endonuclease-Cas3	cas3	cd09696_cas3_CAS-I-U	gnl\|CDD\|274235
NZ_CP053452.1\|WP_171473564.1\|6443579_6445301_-\|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|376633
NZ_CP053452.1\|WP_171473563.1\|6443295_6443580_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP053452.1\|WP_171476160.1\|6448851_6450072_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171473558.1\|6434038_6434215_+\|IS66-family-insertion-sequence-element-accessory-protein-TnpB	unknown	unknown	gnl\|CDD\|377551
NZ_CP053452.1\|WP_171473567.1\|6446585_6446921_+\|DUF5615-family-PIN-like-protein	unknown	unknown	gnl\|CDD\|375906
NZ_CP053452.1\|WP_171473561.1\|6439677_6441309_-\|type-I-U-CRISPR-associated-protein-Cas5/Cas6	csb2gr5	cls000315_csb2gr5_CAS-I-U	gnl\|CDD\|274005
NZ_CP053452.1\|WP_171473568.1\|6446927_6448823_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|223510
NZ_CP053452.1\|WP_171476159.1\|6431158_6432589_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|223737
NZ_CP053452.1\|WP_171473565.1\|6445339_6445549_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171473551.1\|6421999_6422596_+\|ferritin-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|153118
NZ_CP053452.1\|WP_171473554.1\|6426980_6427835_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187578
NZ_CP053452.1\|WP_171473556.1\|6428787_6429807_+\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381326
NZ_CP053452.1\|WP_171473555.1\|6428235_6428697_+\|response-regulator	unknown	unknown	gnl\|CDD\|381118
NZ_CP053452.1\|WP_171473557.1\|6429855_6430887_+\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381326
NZ_CP053452.1\|WP_171473552.1\|6422808_6425352_-\|excinuclease-ABC-subunit-UvrA	unknown	unknown	gnl\|CDD\|223256
NZ_CP053452.1\|WP_171473559.1\|6434207_6434420_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171473566.1\|6446325_6446562_+\|DUF433-domain-containing-protein	unknown	unknown	gnl\|CDD\|225291
NZ_CP053452.1\|WP_171473553.1\|6425422_6426487_-\|NAD(P)-dependent-alcohol-dehydrogenase	unknown	unknown	gnl\|CDD\|176186

Protein	Function_ID	Function_description	E-value
NZ_CP053452.1\|WP_171473562.1\|6441312_6442533_-\|type-I-U-CRISPR-associated-protein-Cas7	gnl\|CDD\|378223	pfam09617, Cas_GSU0053, CRISPR-associated protein GSU0053 (Cas_GSU0053). This entry is found in CRISPR-associated (cas) proteins in the genomes of Geobacter sulfurreducens PCA and Desulfotalea psychrophila LSv54 (both Desulfobacterales from the Deltaproteobacteria), Gemmata obscuriglobus (a Planctomycete), and Actinomyces naeslundii MG1 (Actinobacteria).	1.78581e-46
NZ_CP053452.1\|WP_171473560.1\|6435844_6439681_-\|type-I-U-CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|274235	TIGR02621, CRISPR-associated_helicase_Cas3, CRISPR-associated helicase Cas3, subtype Dpsyc. This model describes a CRISPR-associated putative DEAH-box helicase, or Cas3, of a subtype found in Actinomyces naeslundii MG1, Geobacter sulfurreducens PCA, Gemmata obscuriglobus UQM 2246, and Desulfotalea psychrophila. This protein includes both DEAH and HD motifs.	8.07457e-108
NZ_CP053452.1\|WP_171473564.1\|6443579_6445301_-\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	2.79058e-117
NZ_CP053452.1\|WP_171473563.1\|6443295_6443580_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	4.76517e-23
NZ_CP053452.1\|WP_171473558.1\|6434038_6434215_+\|IS66-family-insertion-sequence-element-accessory-protein-TnpB	gnl\|CDD\|377551	pfam05717, TnpB_IS66, IS66 Orf2 like protein. This protein is found in insertion sequences related to IS66. The function of these proteins is uncertain, but they are probably essential for transposition.	3.12198e-13
NZ_CP053452.1\|WP_171473567.1\|6446585_6446921_+\|DUF5615-family-PIN-like-protein	gnl\|CDD\|375906	pfam18480, DUF5615, Domain of unknown function (DUF5615). This is a domain of unknown function found in potential toxin-antitoxin system component.	1.23865e-16
NZ_CP053452.1\|WP_171473561.1\|6439677_6441309_-\|type-I-U-CRISPR-associated-protein-Cas5/Cas6	gnl\|CDD\|274005	TIGR02165, CRISPR-associated_protein_GSU0054_family, CRISPR-associated protein GSU0054/csb2, Dpsyc system. This model represents a CRISPR-associated protein from the Dpsyc subtype (a type I-C variant), named for Desulfotalea psychrophila LSv54. CRISPR systems confer resistance in prokaryotes to invasive DNA or RNA, including phage and plasmids. CRISPR-associated proteins typically are found near CRISPR repeats and other CRISPR-associated proteins, have low levels of sequence identify, have sequence relationships that suggest lateral transfer, and show some sequence similarity to DNA-active proteins such as helicases and repair proteins.	2.73058e-72
NZ_CP053452.1\|WP_171473568.1\|6446927_6448823_-\|ATP-binding-protein	gnl\|CDD\|223510	COG0433, COG0433, HerA helicase [Replication, recombination, and repair].	2.29066e-26
NZ_CP053452.1\|WP_171476159.1\|6431158_6432589_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|223737	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism].	1.14827e-36
NZ_CP053452.1\|WP_171473566.1\|6446325_6446562_+\|DUF433-domain-containing-protein	gnl\|CDD\|225291	COG2442, COG2442, Uncharacterized conserved protein [Function unknown].	1.68535e-21
NZ_CP053452.1\|WP_171473551.1\|6421999_6422596_+\|ferritin-like-domain-containing-protein	gnl\|CDD\|153118	cd07909, YciF, YciF bacterial stress response protein, ferritin-like iron-binding domain. YciF is a bacterial protein of unknown function that is up-regulated when bacteria experience stress conditions, and is highly conserved in a broad range of bacterial species. YciF has a ferritin-like domain. Ferritin-like, diiron-carboxylate proteins participate in a range of functions including iron regulation, mono-oxygenation, and reactive radical production. These proteins are characterized by the fact that they catalyze dioxygen-dependent oxidation-hydroxylation reactions within diiron centers; one exception is manganese catalase, which catalyzes peroxide-dependent oxidation-reduction within a dimanganese center. Diiron-carboxylate proteins are further characterized by the presence of duplicate metal ligands, glutamates and histidines (ExxH) and two additional glutamates within a four-helix bundle. Outside of these conserved residues there is little obvious homology. Members include bacterioferritin, ferritin, rubrerythrin, aromatic and alkene monooxygenase hydroxylases (AAMH), ribonucleotide reductase R2 (RNRR2), acyl-ACP-desaturases (Acyl_ACP_Desat), manganese (Mn) catalases, demethoxyubiquinone hydroxylases (DMQH), DNA protecting proteins (DPS), and ubiquinol oxidases (AOX), and the aerobic cyclase system, Fe-containing subunit (ACSF).	1.53868e-72
NZ_CP053452.1\|WP_171473554.1\|6426980_6427835_-\|SDR-family-oxidoreductase	gnl\|CDD\|187578	cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs. TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	1.97548e-72
NZ_CP053452.1\|WP_171473556.1\|6428787_6429807_+\|aldo/keto-reductase	gnl\|CDD\|381326	cd19100, AKR_unchar, uncharacterized aldo-keto reductase (AKR) superfamily protein. This family includes a group of uncharacterized AKR superfamily proteins. Aldo-keto reductases (AKRs) are a superfamily of soluble NAD(P)(H) oxidoreductases whose chief purpose is to reduce aldehydes and ketones to primary and secondary alcohols. AKRs are present in all phyla and are of importance in both health and industrial applications.	6.41883e-93
NZ_CP053452.1\|WP_171473555.1\|6428235_6428697_+\|response-regulator	gnl\|CDD\|381118	cd17580, REC_2_DhkD-like, second phosphoacceptor receiver (REC) domain of Dictyostelium discoideum hybrid signal transduction histidine kinase D and similar domains. Dictyostelium discoideum hybrid signal transduction histidine kinase D (DhkD) is a large protein that contains two histidine kinase (HK) and two REC domains on the intracellular side of a single pass transmembrane domain, and extracellular PAS and PAC domains that likely are involved in ligand binding. This model represents the second REC domain and similar domains. DhkD activates the cAMP phosphodiesterase RegA to ensure proper prestalk and prespore patterning, tip formation, and the vertical elongation of the mound into a finger, in Dictyostelium discoideum. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	2.48758e-39
NZ_CP053452.1\|WP_171473557.1\|6429855_6430887_+\|aldo/keto-reductase	gnl\|CDD\|381326	cd19100, AKR_unchar, uncharacterized aldo-keto reductase (AKR) superfamily protein. This family includes a group of uncharacterized AKR superfamily proteins. Aldo-keto reductases (AKRs) are a superfamily of soluble NAD(P)(H) oxidoreductases whose chief purpose is to reduce aldehydes and ketones to primary and secondary alcohols. AKRs are present in all phyla and are of importance in both health and industrial applications.	3.47333e-92
NZ_CP053452.1\|WP_171473552.1\|6422808_6425352_-\|excinuclease-ABC-subunit-UvrA	gnl\|CDD\|223256	COG0178, UvrA, Excinuclease ATPase subunit [DNA replication, recombination, and repair].	0
NZ_CP053452.1\|WP_171473553.1\|6425422_6426487_-\|NAD(P)-dependent-alcohol-dehydrogenase	gnl\|CDD\|176186	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	0

>NZ_CP053452.1|WP_171473559.1|6434207_6434420_-|hypothetical-protein
MRRSLAATEPVLQGGVQFGLEFGDSGLELLVLDEELPNDPMERGNIGRQRGIGSECGGVHATFNTAAGFN
>NZ_CP053452.1|WP_171473558.1|6434038_6434215_+|IS66-family-insertion-sequence-element-accessory-protein-TnpB
MCLWCQRLEAGRYHFPEATPTGIELSAAQFAMILDGIDVSRVRRFKRFSAAPTPSRAS
>NZ_CP053452.1|WP_171476159.1|6431158_6432589_-|FAD-dependent-oxidoreductase
MCVIGGGIAGLTTAYLLARDGKKVIVLDAKPRVAAGETEHTTAHLAWYLDDTFSHLASVRGDEVAKAAAASHRAAIDLIGEIARSERIACDFRQVDGHLFPGADGPDTLDQEEKTLTRLGLPFERTKLTFPGGRSSDCLRFPAHARFHPIKYLAALAAAIRARGGVIHTDTVVEKVRGGAPCRVTTAHGRTVTAGAAVIATNNPFEGGTVLHTKVASYTTYAVAIEVPKGSCGDGLWWDTEDPYHYVRVQPGGEGTEFDHLIVGGEDHKTGQAGDQPQRWDRLVAWAGERVPGAGAVRFHWSGQVFETADGLGLIGPAPWNGPNVFVITGDSGMGMTHGTLGARLVADLVLGRPNELATVYSPSRLTPAAARTLLGENLNAVAQFTDWLTGGDVKGADQIPPGHGAVVRRGLTKLAVYKDDRGQVTTLSAVCPHMGCLVRWNPGEATWDCPCHGSRFSATGTCLHGPSTSDLKKAD
>NZ_CP053452.1|WP_171473557.1|6429855_6430887_+|aldo/keto-reductase
MGENNGPDRRDFLHASAAVPLAAGLAAAVAPPNEKAGTKVPLRAFGTAKDQVSALGLGGATLASAPSYEAAEKIVREALEAGVTFLDNAWEYADGRAEEWMGRAIKGRRDGLFLMTKVCSHGRDKATALKQLDESLKRLGTDHLDLWQIHEVVYWDDPDRHFAKGGAVEALEDAKQAGKVRYVGFTGHKHPSIHLKMLSFDFPFDAVQMPLNPFDATYRSFEREVLPVVNKKGMAAIGMKSFGGDGRPIIKGAVTAEEALRYAMSLPVAVTVSGIDSLTVLRQNLAVARGFVPMPAAEMDALRKRVAPEAADGHLELYKSSARYEGKAGREQHGFPPADELPL
>NZ_CP053452.1|WP_171473556.1|6428787_6429807_+|aldo/keto-reductase
MSHDRRPDGPVPPPRGGEPLIPLRPFGTTKATVSALGLGGHHLGDVPSVEEAIRIVHAAIDGGITFFDNCWEYYNGRTENWLGRALTGKRDRVFLMTKVCTHGRGKDLARKMLDESLRRLGTDHLDLWQVHAVSYDNDPDLAYARGGVIEALEEAKKAGKTRFVGFTGHKDPAIHLKMLRLGYPFDSVQMPLNPFDAGFAPLSFEHRVLPELLKRGIAPLGMKAMGGTAAAIKRGVLTGEEALRYAMSLPVAVTICGMETMDVLKKNLKIAQGFQSLAAEAMDAIRKKCAALAADGRYEPYKVSLKYDNPETRQPHGFPVEPENKEMKEMFKEAGAKPK
>NZ_CP053452.1|WP_171473555.1|6428235_6428697_+|response-regulator
MADKKYRVLVVDDNRDSAESMADLLALSGFEVRTCFDGPAALTACETFRPEACLLDINMPGMDGYELARLLRARFAEHPPVFATMTAYGDHAHLERAVEAGFDLQFTKPVDSHEVTEQLGESVRKGEPVEDDRSVLRRLLARVFGQWSQRNEK
>NZ_CP053452.1|WP_171473554.1|6426980_6427835_-|SDR-family-oxidoreductase
MIVVTGATGKLGAAIIESLLEGTSAADVVASVREPGKAHALVALGVDVRQGDFDRPDTLVRSFDGADRLLLISASGIDHEGRAAQHRRAIRAAVEAGVGHVFYTSLLPGDGSVAYVMKAHLDTEADLRSSGLAFTILRNGAYAEGWRLYLGDVSGGEAVVPGDGPVSWVSRSDLADGTARLLLGAGHAGETRNLTGPGAIDLKGTAGILGRVRARPIVRRIVPVEDYVSRAVAAGKTEEFAREWATTYFGLERGEFGKVDPFLGALVGRPLRTLEEVLAQAAHD
>NZ_CP053452.1|WP_171473553.1|6425422_6426487_-|NAD(P)-dependent-alcohol-dehydrogenase
MISAIGYGTNHSYTSLGPHKFERRAPGPSDVQIEVLFCGVCHSDIHQCANDWGNTIYPCVPGHEIVGRVSAVGSAVTKFKSGDRVGVGCMVDSCRRCASCLKGLEQYCEGPKGATMTYNGPFIPDGTNTFGGYSNSIVVADHFVLRVPSNLDLKGVAPLLCAGITTYSPLRHWNVQPGQTVGVVGLGGLGHVAVKLATALGAHVTVFSTSPEKKDDALRFGAKAFALSTDKEELEKRARSFDFLLSTVPESHDINPYVKLLKRDGTLALVGALGPFAKPTDNSEVAFHRRTVAGSLIGGIAETQEVLDFCGTHGITADVEVIPIESINDAFKKVKKGGVRYRYVIDIANTLKLA
>NZ_CP053452.1|WP_171473552.1|6422808_6425352_-|excinuclease-ABC-subunit-UvrA
MGQSDPPPFTPIDGSPGHVRVRGARTHNLKGVDVDVPRDALVVFTGVSGSGKSSLAFGTLYAEAQRRYLESVAPYARRLFHQMSAPDVDAIDGLPPAVALQQQRGTPTTRSSVGSVTTLSNLLRMLYSRAGDYPRGQPLLYAESFSPNTPEGACPNCHGLGRVYDATEASMVPDDSLSIRERAIAAWPPAWHGQNLRDIVTTLGYDVDARWRDLPRKDRNWLLFTDEQPTVPVYPGFDRAEVKEAIKRKVAPGYQGTFTSARRYVLETFARTESAAMKRRVSQYLVNSDCPTCRGKRLRPEALSVTFAGLDIADMSRQPLKRLAALFRPFAGDSAPAAKTGAAEHPEKVEVTRRIARDLGPRLDVLLDLGLGYLTLERSTPTLSPGELQRLRLATQVRSNLFGVVYVLDEPSAGLHPADTEALLRALARLKAAGNSLFVVEHELEVIRHADWIVDVGPDAGERGGHVLYSGPPDGLRQVAGSHTRPFLFAEHAPPAREPRTPKGWLRLEGVTRNNLRNLAAAFPLGVLTSVTGVSGSGKSSLVSQALVELVAGQLGQAAPSAGEESEELEQAPAAPVGGRIAAGMGAVKRLVVVDQKPIGRTPRSNLATYTGLFDHVRKLFAGTKAAKARKYDAGRFSFNVAKGRCGTCTGEGFVMVELLFLPSVYAPCPTCHGARYNAKTLEIEYRGKTVADVLGLTVDAAWEFLAEEPHVRRSLGVLRDVGLGYLRLGQSATELSGGEAQRIKLATELQRAERGTTLYVLDEPTTGLHPADVERLMVQLDGLVDAGNTVVVVEHDLRVVSGSDWVIDVGPGAGDEGGRVVAAGVPKEVARAAGSRTAPYLERFRG
>NZ_CP053452.1|WP_171473551.1|6421999_6422596_+|ferritin-like-domain-containing-protein
MSLDSLHDLYVDELKDLYNAENQLLKALPKLAKSATAPELKAAFTEHLEVTRKQVERLEQIFTALETSPKGKKCKAMEGLIEEGKDVLEEDGEPAVIDAALIACAQRVEHYEMAGYGCVRTFAKLLGYEDAEALLQETLDEEGEADKKLTELAETVINLEANDAEGEEEGDEDDDEGGDEPEVPPKRGKTSPKAGSKK
>NZ_CP053452.1|WP_171473560.1|6435844_6439681_-|type-I-U-CRISPR-associated-helicase/endonuclease-Cas3
MSPPTPSQFEAFYTAVHGFAPFPWQKRLAARVCGGAWPRAIALPTAAGKTACIDIAVFALACGAKAAPRRIFFVVDRRIVVDQAYEHAKKLAKVLDAAKSGILKEVAESLRGLTHEVDARPLDVYALRGGMYRESAWARSPLQPTVIASTVDQVGSRLLFRGYGVSDSMKPVHAGLVGNDSLILLDEAHCARPFDQTMQAIEKYREWGEKYDAPFKFVSITATPSGGLPEAQIERAAAEDLTHPVLGARIRASKPARLVVAEKARGKSFKQWGKPLVETLMQHAKELAAPDGCVGIIVNRVATARELAKQLGPDAVLLTGRMRPLDRDRIFEEKLQPLLSGASGARPKFVVGTQCLECGADFDFHALVTECASLDALRQRFGRLNRIAARPSAKAVIVVRADQTEPAEKEADRDPVYDNALANTWKWLRGDPAAPRAEFDFGVSAMSEMLRGISEEGVSELNAPAPDAPVLFPAHLDCWVQTHPIPTPEPDPALFLHGPKKSGQPDVQVVFRADLGEDATKWAEIVGLCPPSSSEAVAVPVGVFRKWMAGEHAEDETADLEGGTVPESEEDDQESQPRHALRWRGPEEGEEKTKVVLAPKDVTPNDTYVLPCSAPGAAGLGDFPPGEIADYAEEAFQRSRDKALLRLPGLVIPDDADKAEETALVSSALQAALTDDPPEWRKRAVAYFTDPKFAKRREIDRHPLGGFVISGKNRLFQFDPTYLDDSEPAESFRGAAVPLEAHSQGVAGYAARFARGCGLDVALFTQAGLWHDLGKLDPRFQAMLRQCSPRTAAIGEPLAKSAKSPRTKRERDEAREVHKYPVGARHELLSAVLVAAKVGSDEVDDLLLHLIATHHGFARPFTGAVDDPATDADANRPFAPTLFAEAFPLIPYRQQAREWNAELPERFWRVVRKYGWWGAAYHEAVFRLADHAQSAAEQDRDATPPPIATTWVELPAKAVRAEWHALPLTGLDGANPLAFLAALGTLVVCDQLARGPEPPAWLNGRVALSWGRPLAPAVPVLHLPGPPPAPADVAAFLAGRLARAVEDHASAWVVDMLERGLRKGATRDFSVIKRHAVPPRPADRHRLDWVTALSCESALGADSQLQTVRCDYLIGNLKSLLAGTAAGHLRRTLFDPWDYADGLSNQSLHWEPGEDRRHAYQWHQPNGDPTRKRRGGMLGANRLALEAWLLFPSFPDGDERVRTRGFRGNRAGSTFWLWPLWRSRLTPDGVASILSVPNLASAAAGADSLRGLGVTAVYRSRRILVGKTPNLTPADALV
>NZ_CP053452.1|WP_171473561.1|6439677_6441309_-|type-I-U-CRISPR-associated-protein-Cas5/Cas6
MFALGVEFLMRRAVITRIDDREEPEWPPHPDRVFMALVAAWGEAGEDTDQRAALEWLETLAPPTLAVPLEVSKRTPFTSYVPVNDDDSPVGPKGPFGPMGSLPMGRNRQPRQFPAVVPASPEFFLRWDVDLPANLRPALERICGLATYLGHSASPVRMWVADEAPEPTLVPVEERPKTKLRVFGPGRLKYLEGRYNRAAIENYATLDNEVNLLRMQFQAAKGKTKSALKERLAAAEATRDAQSPSGPPQTLRPQPSLWQGYAPPRKEPTGDVIDGPFDAGLFVFRELPGNRRYALESCGIVAEAIRLELVRRHGPNVQDAPEWLSGHAADGGPSKQPRPAYVPLGFVGHEHADGHLLGIAVAVPREFEHTEELFRLLARHDGAPQHDIEPGVPYLSVMVRNPHLENREIGRLDLELDERPEGRRQATLKSFTWTSPARIWTTVTPVMLPQFPRRGLGAEEVIAKACVDAGYPEPVAVRVSFAPLVRGTPHSRAFHVKPRQGRPPRPLTHAKIEFPVRVRGPVLIGAGRYAGYGVCRPCQEDQS
>NZ_CP053452.1|WP_171473562.1|6441312_6442533_-|type-I-U-CRISPR-associated-protein-Cas7
MPTDPTLSYDDLKTAIAGSAAAFRLTLKLEAVSPKVFPPTYEGGKYATEDRNIGGQKVPCVLLDSVPSQANRMELALQDAHDGGHFKLPLVSVNFSAVDNPSIPKITSLQAPHRIADAILRDSSITEDKKTTKFRESEIGKELNNLSTGYATPLLQYAPHCLVFGMWDSTGPRGGLGVKFARALVSEIIGVNAVGGRKTSSRIDPLNIRVNSGPLYEAKGGGWTLDKDAATKEKNAPKKLGKDGKPSEANHGNVTPTISDGGFTIDYAEQTTVLSLPALRRLRFPAKGGEKSTPEGDNAARTYLAALGLLGATLAVEAGYDLRSRCILHAKDAVTWHLLGKPGEADKAFTLDKAAALKLYNDTLAAVQKAQLPLHLEEIILTPSDDLVTLVKKSMELAAAEAGTEG
>NZ_CP053452.1|WP_171473563.1|6443295_6443580_-|CRISPR-associated-endonuclease-Cas2
MDSYLVCYDISDPKRLRKVARTCEDFGYRKQLSVFLVRVSSTAIVRLRTRLYDIINRDEDQVLFIPLTESALQRMEAIGRATDAHDKHDAAITM
>NZ_CP053452.1|WP_171473564.1|6443579_6445301_-|CRISPR-associated-endonuclease-Cas1
MSATTDPIPVRALNQVTYCPRLYYLQYVDCVMPVNEHVEGGLFDHRRVDSGDLKNKTRTDRGTATSRGVALSSEVLGISGVLDVIEEKNGEQYPVETKHGKAPHDDDGKPTVWDNDAVQLCAQALLMEEAFGQPVPRGYQFHAGSRERVPLEFTDALRQKTRAAITRCRELQVLDAPPEPLPAELRHRCFGCSLASVCQPEEILYQIGHPNPADVDTSSAKTPPDVRLVIPKSDNGAVLYLQEPGSSVGKRSEHLVIKKDGKEMNRVPLHAVRQVVVCGNVQVSTQALETMAENEIGVSYVTGHGRFIGSFVPAPAKNVSLREAQFRKFSDPAASLELSKAVVRAKLANQRTLLMRTLRGEEEARGSHEPAAKGMYGLLAGLDRLTSVESVLGTEGQGAALYFGEFKRFLKQPPTGKGFDFTTRNRRPPRDPVNAVLSFAYAMLAKDCFAAVCTVGFDPYKGFFHQGRHGKPSFALDLMEEFRPVIADSVVLTLINNELLAPADFIIWRDACNLTDAGRKAFFAAYEQRKCTEVTHPVYGYRMSYARMLEVQARMLAAFVRGEIPTYTGFMVR
>NZ_CP053452.1|WP_171473565.1|6445339_6445549_-|hypothetical-protein
MEPVLIASYRVMLRTHPNDCSVDRILEDPDRRSEYLALVRASAVQRSEYEILRSLHNLRKRSKLPRRSD
>NZ_CP053452.1|WP_171473566.1|6446325_6446562_+|DUF433-domain-containing-protein
MTTPRIISDPKILFGKPVLAGTRISVELILEELGAGTSVDDLLREYPHLNREQILEAVRYAAQVIRTDVIYPLAPVLA
>NZ_CP053452.1|WP_171473567.1|6446585_6446921_+|DUF5615-family-PIN-like-protein
MESIITRLRADGHTVHVIRDTNAGVTDPDVLAIAIGHQAVLLTQDKDFGELVFRLQLNHCGIVLIRLGGVPIADRAEMVANVIAGRVGELPNAFCVISSNSVRIRPSGTQP
>NZ_CP053452.1|WP_171473568.1|6446927_6448823_-|ATP-binding-protein
MSDSKNGTAFLDKLAADSAKAGGPVVPHPDDTGAVGKTLFDLPGSTDLTVTVVVPKDQLHAAPAQSLVRIKSRTDGRTYLGVVTAGPFAEPDGLRGDSPMLTAVVTHGGDYLPPYHGRFQVTILGEELKDGELTPPRLRPVPNSTVFVLDDAEAGTVLKCGGDVRLGLAVGHERVEVGAPAKAKSVFPRHTAVLGTTGGGKSTTVAGLIARARAAGMAVIVLDVEGEYTVMHEPTDHKAMLAGLRDRNLPPAGVPAKDMTVYHLVGRGTANPAHPNLREFSLQFARLSPYAVMEILQFSDAQQERFLKAYDITKELMRDLNIFPAKDSADQQRLALENDEFERGYPRMMLSLLMDVVGACLSRSEKGPKEGRGKKDRDDEDDAPVAFESRTPALRTSEGKAKLATRVNAANPPGNAISWRAVLGRLARLNRMKVFHDEGGKPPMSYTHLLKPGSVSVIDLSDSGYSELNNLVIADILRGVQDAQDNAYTAFEAAKARGHAAAEPPRVLIVIEEAHEFLSEERVTKTPVLFEQVAKICKRGRKRWLGLCFVTQLPSHLPKQVLGLCNSFIIHKLKDPQVVTLLKRMVGDVDEGLWTRLPNLAAGQAIVSFPHFSRPLLVSIDPSQAKLRLTE
>NZ_CP053452.1|WP_171476160.1|6448851_6450072_-|hypothetical-protein
MPLSRPIAGTSDAFEEYFGESLGDTLDLGKWREGVDLVSEYARIEREVEQAVAFEGVQERRVRAAVFPHIALKDGAPPEAGFYDKLTLDDIAAVHTGLLFNGGVACCDGTVQLHDTLALTVHQIGVCLVAYTGNQGSWSTRLYRRDLREEKPDPVETMLALLERRGRRAGLNQPDRRDGLSELAQRAVMSFAEAKVLLDHTNAVWRLGHGSPAPYQLLAGAGNPDMAIESIKVLRRMIDHRKFVYVASEAGDRDYLQFGQALRPLEYVVIGTLRDRIEGFVRDITFGGKPTVDANWDGERLSPAQWVLKFQNEIASQVLVGVYRASALAPPQVFYAHREHFELAAAVAIADSVLLPDRGFPMLIDLADRACKSVYGGGSLRELVDAAYARCGAGVRFGSERQNRPN

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Crispr_ID: NZ_CP053452_27

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053452_27

6554993-6555085

Orphan

Consensus_repeat	Method
GGTCAACCCGCAAGGGGAGGAAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP053452_27

>merge|NZ_CP053452|27|6554993-6555085|CRISPRCasFinder
GGTCAACCCGCAAGGGGAGGAATTCATGCCCGAAGCAAGGTCGTGCGTGGCGGCTCGAACCGCGACCGTCGATCAACCCGCAAGGGGAGGAAT

>NZ_CP053452|27|27|6554993-6555085|CRISPRCasFinder
GGTCAACCCGCAAGGGGAGGAAT	TCATGCCCGAAGCAAGGTCGTGCGTGGCGGCTCGAACCGCGACCGTC
GATCAACCCGCAAGGGGAGGAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053452.1\|WP_171473628.1\|6538412_6539036_+\|RHS-repeat-associated-core-domain-containing-protein	unknown	unknown	gnl\|CDD\|274730
NZ_CP053452.1\|WP_171473630.1\|6539597_6539942_-\|winged-helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|379282
NZ_CP053452.1\|WP_171468899.1\|6557288_6558845_+\|IS66-family-transposase	unknown	unknown	gnl\|CDD\|376980
NZ_CP053452.1\|WP_171473637.1\|6553662_6554586_+\|hypothetical-protein	RT	pfam00078_RT_CAS-I:CAS-III	gnl\|CDD\|275209
NZ_CP053452.1\|WP_171473636.1\|6544450_6552190_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274730
NZ_CP053452.1\|WP_171476165.1\|6561637_6561895_-\|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin	unknown	unknown	gnl\|CDD\|376852
NZ_CP053452.1\|WP_171473629.1\|6539058_6539574_-\|transposase	unknown	unknown	gnl\|CDD\|315923
NZ_CP053452.1\|WP_171473632.1\|6540682_6540841_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171473640.1\|6560238_6560475_-\|antitoxin-family-protein	unknown	unknown	gnl\|CDD\|376681
NZ_CP053452.1\|WP_171473633.1\|6540878_6541463_+\|winged-helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|379282
NZ_CP053452.1\|WP_171473634.1\|6541386_6542907_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|274350
NZ_CP053452.1\|WP_171468900.1\|6556897_6557275_+\|IS66-family-insertion-sequence-element-accessory-protein-TnpB	unknown	unknown	gnl\|CDD\|377551
NZ_CP053452.1\|WP_171473639.1\|6559757_6560222_-\|type-II-toxin-antitoxin-system-VapC-family-toxin	unknown	unknown	gnl\|CDD\|350222
NZ_CP053452.1\|WP_171473635.1\|6543076_6543946_-\|IS630-family-transposase	unknown	unknown	gnl\|CDD\|315923
NZ_CP053452.1\|WP_171473638.1\|6555087_6556341_+\|group-II-intron-reverse-transcriptase/maturase	RT	pfam00078_RT_CAS-I:CAS-III	gnl\|CDD\|275209
NZ_CP053452.1\|WP_171473642.1\|6561195_6561633_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171468866.1\|6556556_6556904_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171473631.1\|6540143_6540653_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171473641.1\|6560843_6561047_-\|AlpA-family-phage-regulatory-protein	unknown	unknown	gnl\|CDD\|283558
NZ_CP053452.1\|WP_171476164.1\|6558997_6559468_-\|DUF4102-domain-containing-protein	unknown	unknown	gnl\|CDD\|379139

Protein	Function_ID	Function_description	E-value
NZ_CP053452.1\|WP_171473628.1\|6538412_6539036_+\|RHS-repeat-associated-core-domain-containing-protein	gnl\|CDD\|274730	TIGR03696, tRNA_nuclease_WapA, RHS repeat-associated core domain. This model represents a conserved unique core sequence shared by large numbers of proteins. It is occasional in the Archaea Methanosarcina barkeri) but common in bacteria and eukaryotes. Most fall into two large classes. One class consists of long proteins in which two classes of repeats are abundant: an FG-GAP repeat (pfam01839) class, and an RHS repeat (pfam05593) or YD repeat (TIGR01643). This class includes secreted bacterial insecticidal toxins and intercellular signalling proteins such as the teneurins in animals. The other class consists of uncharacterized proteins shorter than 400 amino acids, where this core domain of about 75 amino acids tends to occur in the N-terminal half. Over twenty such proteins are found in Pseudomonas putida alone; little sequence similarity or repeat structure is found among these proteins outside the region modeled by this domain.	5.00346e-15
NZ_CP053452.1\|WP_171473630.1\|6539597_6539942_-\|winged-helix-turn-helix-domain-containing-protein	gnl\|CDD\|379282	pfam13592, HTH_33, Winged helix-turn helix. This helix-turn-helix domain is often found in transferases and is likely to be DNA-binding.	8.95558e-09
NZ_CP053452.1\|WP_171473637.1\|6553662_6554586_+\|hypothetical-protein	gnl\|CDD\|275209	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase. Members of this protein family are multifunctional proteins encoded in most examples of bacterial group II introns. These group II introns are mobile selfish genetic elements, often with multiple highly identical copies per genome. Member proteins have an N-terminal reverse transcriptase (RNA-directed DNA polymerase) domain (pfam00078) followed by an RNA-binding maturase domain (pfam08388). Some members of this family may have an additional C-terminal DNA endonuclease domain that this model does not cover. A region of the group II intron ribozyme structure should be detectable nearby on the genome by Rfam model RF00029. [Mobile and extrachromosomal element functions, Other].	4.3755e-94
NZ_CP053452.1\|WP_171473636.1\|6544450_6552190_-\|hypothetical-protein	gnl\|CDD\|274730	TIGR03696, tRNA_nuclease_WapA, RHS repeat-associated core domain. This model represents a conserved unique core sequence shared by large numbers of proteins. It is occasional in the Archaea Methanosarcina barkeri) but common in bacteria and eukaryotes. Most fall into two large classes. One class consists of long proteins in which two classes of repeats are abundant: an FG-GAP repeat (pfam01839) class, and an RHS repeat (pfam05593) or YD repeat (TIGR01643). This class includes secreted bacterial insecticidal toxins and intercellular signalling proteins such as the teneurins in animals. The other class consists of uncharacterized proteins shorter than 400 amino acids, where this core domain of about 75 amino acids tends to occur in the N-terminal half. Over twenty such proteins are found in Pseudomonas putida alone; little sequence similarity or repeat structure is found among these proteins outside the region modeled by this domain.	2.76819e-14
NZ_CP053452.1\|WP_171476165.1\|6561637_6561895_-\|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin	gnl\|CDD\|376852	pfam02604, PhdYeFM_antitox, Antitoxin Phd_YefM, type II toxin-antitoxin system. Members of this family act as antitoxins in type II toxin-antitoxin systems. When bound to their toxin partners, they can bind DNA via the N-terminus and repress the expression of operons containing genes encoding the toxin and the antitoxin. This domain complexes with Txe toxins containing pfam06769, Fic/DOC toxins containing pfam02661 and YafO toxins containing pfam13957.	0.000124478
NZ_CP053452.1\|WP_171473629.1\|6539058_6539574_-\|transposase	gnl\|CDD\|315923	pfam13358, DDE_3, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	4.13821e-14
NZ_CP053452.1\|WP_171473640.1\|6560238_6560475_-\|antitoxin-family-protein	gnl\|CDD\|376681	pfam01954, DUF104, Protein of unknown function DUF104. This family includes short archaebacterial proteins of unknown function. Archaeoglobus fulgidus has twelve copies of this protein, with several being clustered together in the genome.	1.9434e-06
NZ_CP053452.1\|WP_171473633.1\|6540878_6541463_+\|winged-helix-turn-helix-domain-containing-protein	gnl\|CDD\|379282	pfam13592, HTH_33, Winged helix-turn helix. This helix-turn-helix domain is often found in transferases and is likely to be DNA-binding.	2.74424e-08
NZ_CP053452.1\|WP_171473634.1\|6541386_6542907_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|274350	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.	1.77525e-25
NZ_CP053452.1\|WP_171468900.1\|6556897_6557275_+\|IS66-family-insertion-sequence-element-accessory-protein-TnpB	gnl\|CDD\|377551	pfam05717, TnpB_IS66, IS66 Orf2 like protein. This protein is found in insertion sequences related to IS66. The function of these proteins is uncertain, but they are probably essential for transposition.	2.4029e-39
NZ_CP053452.1\|WP_171473639.1\|6559757_6560222_-\|type-II-toxin-antitoxin-system-VapC-family-toxin	gnl\|CDD\|350222	cd09874, PIN_MT3492-like, VapC-like PIN domain of the hypothetical protein MT3492 of Mycobacterium tuberculosis CDC1551 and other uncharacterized, annotated PilT protein domain proteins. Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of Mycobacterium tuberculosis CDC1551, hypothetical protein MT3492, and similar bacterial and archaeal proteins are included in this subfamily. They are PIN domain homologs of the Mycobacterium tuberculosis VapC and Neisseria gonorrhoeae FitB toxins of the prokaryotic toxin/antitoxin operons, VapBC and FitAB, respectively, which are believed to be involved in growth inhibition by regulating translation. These toxins are nearly always co-expressed with an antitoxin, a cognate protein inhibitor, forming an inert protein complex. Disassociation of the protein complex activates the ribonuclease activity of the toxin by an, as yet undefined mechanism. The PIN domain belongs to a large nuclease superfamily. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	1.16525e-36
NZ_CP053452.1\|WP_171473635.1\|6543076_6543946_-\|IS630-family-transposase	gnl\|CDD\|315923	pfam13358, DDE_3, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	1.74044e-14
NZ_CP053452.1\|WP_171473638.1\|6555087_6556341_+\|group-II-intron-reverse-transcriptase/maturase	gnl\|CDD\|275209	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase. Members of this protein family are multifunctional proteins encoded in most examples of bacterial group II introns. These group II introns are mobile selfish genetic elements, often with multiple highly identical copies per genome. Member proteins have an N-terminal reverse transcriptase (RNA-directed DNA polymerase) domain (pfam00078) followed by an RNA-binding maturase domain (pfam08388). Some members of this family may have an additional C-terminal DNA endonuclease domain that this model does not cover. A region of the group II intron ribozyme structure should be detectable nearby on the genome by Rfam model RF00029. [Mobile and extrachromosomal element functions, Other].	0
NZ_CP053452.1\|WP_171468899.1\|6557288_6558845_+\|IS66-family-transposase	gnl\|CDD\|376980	pfam03050, DDE_Tnp_IS66, Transposase IS66 family. Transposase proteins are necessary for efficient DNA transposition. This family includes IS66 from Agrobacterium tumefaciens.	3.24166e-90
NZ_CP053452.1\|WP_171473641.1\|6560843_6561047_-\|AlpA-family-phage-regulatory-protein	gnl\|CDD\|283558	pfam05930, Phage_AlpA, Prophage CP4-57 regulatory protein (AlpA). This family consists of several short bacterial and phage proteins which are related to the E. coli protein AlpA. AlpA suppress two phenotypes of a delta lon protease mutant, overproduction of capsular polysaccharide and sensitivity to UV light. Several of the sequences in this family are thought to be DNA-binding proteins.	7.72252e-07
NZ_CP053452.1\|WP_171476164.1\|6558997_6559468_-\|DUF4102-domain-containing-protein	gnl\|CDD\|379139	pfam13356, Arm-DNA-bind_3, Arm DNA-binding domain. This DNA-binding domain is found at the N-terminus of a wide variety of phage integrase proteins.	2.45333e-26

>NZ_CP053452.1|WP_171473637.1|6553662_6554586_+|hypothetical-protein
MSLTPPETVRKLQAALHAKAKGAPGYRFYALYDKVCRKDVLSYAYERCRQNAGAPGVDAQTFEAIEKSGRERWLDALTQALRDRTYRPRPIRRVFIPKPDGKQRPLGIATIRDRVVQMAMVVVLESIFEADLTPEQYAYRPGRSAHDALRRVHALVNDGYTEVVDADLAGYFDSIPHPELLKSVARRVSDRHVLSLIKAWLEAPVEEADRRGRVSRTTCNRDQRRGTPQGSPLSPLLSNVYFRRFVLGWSTLGHAQRLDAHIVNYADDCAPRRREGSGSVPDAKRHATREMRVDPSGSGCRTRSQTT
>NZ_CP053452.1|WP_171473636.1|6544450_6552190_-|hypothetical-protein
MTRTHRLPSAFTLFDAVLNLRDRLAGLFCARHAAPARVRLVVESMEERLVPTGIPLPNPEIFVGSGVGDAAVVKAYNAGAGTLQFSTSVSAFGSTYTGGLDVSAGDFTGSGLPDAVVSAASGTSATVTILDGTTGSAISGALGSFTAYSSITGGGVVTATGDVEGNGVTDLITAAQTTGGLEIKVFSGSDGSVLADFDVTGTAFSGAVSLAAGDLTGSGKADVVLGGSGGWVAAYDPLSGTALSSTLGGFQAFGSGYTGGVVSVAADPMAGVTNPGSTSVLAVGTGAGVTTEVKTFDASGTVLQDIQPFGSSDTNGAHVALAYVSNSSAPTTPDIVASSGSGTTDQVSVFSGTTGAQLMTPLGSYSPFGSTADGVFVAAENDFHLGPVYYYNGSTGTPSLVAGQTLSVYTIFGGNGAPPTGTLTFTLYNSSSTLLGTWAEALSPDGGPYAITTPFSVNLAAGTYTIDASYPGSPNYTTSFSGPIVSFTVSAASGIAQPMAPANPSGAGLLTSASGAWDTPADVSATGVVYGTGGVTVNRTDLSAAGFGSPWGLHWSWTNLSGYSNGINGLGSMFTETAFLEEENGTNSIALVDSAGNAHYFDWNGTSYVARYADTATLVYNSSTDQYVATDSTGQAFTFYGFSSSTASDLQGKLISAATAAGVTTSVTSRNSAGNPTQIQRSTGSGSSQLTEAYVLTYLTSGVNTGLLSGVVQETQTGSTGSWVTVRQTAYTYYTGSNAYGAAGDLETATVEDGSGNALGTSYYRYYTSGTGSTGNIAYVFDPDAYALLTAALGTGVDSLTNTQVAPYATQAFQYNSAGQVSSATIAGLGTYTYTYTTNSAASGATGPNVWTTETVETKPDGTTNTVFTNAQGGLILSVYTDASSNKWYTFDHYNSLGQLILTAAPSAVTGYSTSYLDLVNYGGGTTYLSSSAGLITDYTYASTTTATTSTAGNAAGYLQEVDIQQGTGGTIVPQETETYIENTVGSINFFNVATDTKYRNTNGTGGETTSSAYTYLSGTNQVATVTTTLPTITTAENGSNTANTTVTVYDSFGNVQWTKDANGFLNYTQTDTLTGAVVKTITDVNTSLTSTFTNLPSGWTTPTGGGLQLVTTYVVDGLGRVTKETDPNGNITYTVYLDTAHEVRTYAGWNTTTNAPTGPTTVTRDDMANGYTETLTMSAAPAVSGGVPTGTESIAKIQSLTRTYRNAAGQVTAVDTYYNLSGLTYTTGVMGTAGVNFDQTQYQYDVDGNLCRTVDQLGTITRTVYDGQGRKVSVWVGTNDTPTSGTWSPTNNTGTSNMVEVTSYQYDGGGVGDGNLTAVTQYPGGSAAAEETEYWYDWRDRKVAEKSGVQTSEGSGVNRPLTVLTYDNRNEVTEAQMYAADGLAPTIVGGVLSLPGGISSDLRAQSTISYDEQGQVYRTDTYDVNPSTGSVGSNTLYTLTWHDARGNVIETQAPGGLVTKDTVDGVGRTTAEYTTDGAGGTGYAAASSVASDTVLSQTLYTYDSNGNLVEAVSSDRFDTATGTGALGTPTTGIAARVSYMAYYFDLANRLVASVNVGTNGGTAWTRPSSVPTGSSTVLVTSTAYSTDAVQDIVLTGSPTGGTFTLTFGGQTTSAIAYNASAATVQTALQALTSVGSGNVTVSAAPSGSGWEVWFTGTLASSYQTAITGNGAGLTGGTSPAVAVTAISAGGDAGHAAIVTDPAGNVARTYTDAEGRTVRTIQDFTNGVVTGTSNATTGYTYNAVGTASVTAYQTGGGVQVTAYAYGVSATTGSTITSNDIVGITEYPDGTSGLASSAQEVTTTVNALGQALTSTDRNGNVHTYSYDVLGRQVSDAVTTLGSGVDGGVRLITTAYDGQGNAYLVTSDNATSGGSVVNQVERVYNGLGQLITEYQAQSGTVNTSSTPSVQYAYAEMPSGADQSRLTSITYPDGYVLTYNYSTGLNSTISRLSSLSDTTGTLEAYKYLGLDTVVERDHPQTNVNQTLISQTGGTGDAGDKYVGLDRFGRVVDDLWVNTSTSTTTDEFQYGYDADNNVLWRQNTVNTAFGELYTYTAENQLASFQRGTLNSTKTGLTGTASASQSFITNAVGDFTSITTNGTAQTLSANAQNEITAISGATTPTYDSNGNMTADQNGTKFVYDAWNRLVAVKNSSGTTLETFSYDGLGRRVTVTASGTTTDLFYSNQGQALEEMVSGSATARYVWSPVYVNAMVLRDNATGSPGTLNQRLWVQQDANWNVTALANGSGVVVERYVDSPYGVLTIYNAGYTSTLTSSAYGWVYGFQGMRYDATSGLNESESRFYSPTLQRWVTMDPTGFAAKDMNLYRFVTNDPTNTTDPSGLAPPSRPTGALGSQTPNWLTNTIIPPSASSNPRLDETKPTLYWTATEGWWYLAPGKLSATGHVGSVGWTDGTYNYLVPAPPVGGPAPIAPQGPPPLGVQNPPAPMVPGRPNPNQGANPFRPNPNQGANPFQGNPFGIGVPNSPPSGWYVDGVTIPVVPNPVVPPQFPNPFPSSGFTYNGIAGGVSIYPSQGLGVPGTYYGGGWSNNTMGIFLGVDPQSHGAGGMFYYNYGATPSQPFRPFRR
>NZ_CP053452.1|WP_171473635.1|6543076_6543946_-|IS630-family-transposase
MVATACQSVAETGEPLSRQSLADLTRRANRLLAEPMSKSTVWRTLDEDAIKPWQYEHWIFPRDRQFRKKAGPVFDLYAGVWNGEPLGPKDFVLSCDEKTSIQARQRKHPGPAPKPGRRRRVEPEYKRGGALQYLAAWDVHRGIVTGRCEAKTGIVPFGRLVDQLLESAAYAAAERLFLVVDNGSSHRGRTSIQRLKKRDRRIVLLHTPVHASWLNQAEVYFSMVQRKVLTPNDFANLEELRVRLRLYEELSNRSPKPFQWKFTREKLERWLQRVKPHFAELQIAGDSLG
>NZ_CP053452.1|WP_171473634.1|6541386_6542907_-|tetratricopeptide-repeat-protein
MMLRLQVLVTALSVASVFASGVAEAKPSEPSTALEFIRQAEAAKVKGEWDKAIQDYNAALRLNPTSTGILIGRAECWANQGRWSKAIADWDQIICFEPKSSIAFCERGRAWSRKQEWDKASADLNEAIRLDSKNARAYSQRALIRLELFQRDRALTDAQDAVRLAPVDADALACLGYVRITRGELTQGFKDLNKALQQDPSFSTGYALRSVAWEAAGQLDKGSSDIEMAIRLKPNDGLNYLMRGTSWAVRGEWNRAVEDFNLAIRLDPENPEALVRRAMLWHAKGQYDKAMTDLNQALRLNPKHTHALLQRGITWGAKWDFEKAIADFDAVIQLMPTQPHAFTARGCAWGMKGEWDRSLADHNERVRLTPLDADAFINRAAVWKYKEEWGKALADLDQAIRLSPNNPKALIDRALFRATCPVGTFRDGKASVADARQACEILNWKNMGYIEILAAAYSESGQFDDASKLLQILLKNPEYAKINGDAVRYRLKLCDQNKPFHLEIDR
>NZ_CP053452.1|WP_171473633.1|6540878_6541463_+|winged-helix-turn-helix-domain-containing-protein
MAILLPDARELSDEVLEALRLRAVRGCELGFTEADVAALLGVCRETVSRWWAAYARDGLTALPQDRTGRPTGTGRTLSDQQAQQIQARLNGHSPEDLGIPAPLWTRRAVQQLIQNELGIAMPVRTVGSYLHRWGYTATRVASSRTFNGVVYQESSDPSRRVTDQFSVTHFTYRFPSEMACFDRTTSGDIELRHR
>NZ_CP053452.1|WP_171473632.1|6540682_6540841_-|hypothetical-protein
MAFVSNFHAGVIATAINMKSDALLAMLLKIEEEFEDVTKLRSILEAMADVPK
>NZ_CP053452.1|WP_171473631.1|6540143_6540653_+|hypothetical-protein
MQRPVTSVPYLNLRPLGANMKRRVFFAILLLICTVVAYTLALYLSTPEAKSRKVFRHNLVRNSPNWHTFDLAYSPSPGCGYTATAIWKKGEEAYAFSGLRHPDSIGGTAVSVYSVKDGRIDDTKFLVWYRFTTDRHLSKIEVGEGIESEMDWAKSVAQEFVNAMPDYIE
>NZ_CP053452.1|WP_171473630.1|6539597_6539942_-|winged-helix-turn-helix-domain-containing-protein
MYAWAARWRNAQRPKDQRLRDAERSGRPPDQRDQITQKLTALMSTTPTAHGYRHPNWTTPLLVAHLAREHQLEVSARTVRRALHGLGYRWKRPRFVLSRRDPNLRQAKGSSRGD
>NZ_CP053452.1|WP_171473629.1|6539058_6539574_-|transposase
MFSDATILTQTPPLRACWSKIGEQAEVPITGNRDHRVVFGALNARTGAVWLDEAAQWNQDAFQEHLRSIRSWWRGWKLVLVVARGSPHTAKRSRQLAAQSGIEMRFLPTACPELNSVEGLWRHVKGRVLANEPTPDLSQSLGRVHDELFQMTPTQHLRLAGVLSGSFWLPA
>NZ_CP053452.1|WP_171473628.1|6538412_6539036_+|RHS-repeat-associated-core-domain-containing-protein
MYDPSIGRWLTPDPTGFSAGDVDLYRFVGNNPVNATDPSGLAELFGLQKKLDAATRDSWKNDPASYKDKLIVVPDNPDIEATLKKIGIKKGELFKYVVTKDGKVVFFRHEINHPFGPAQAGGEVGEDVLAAGYARYYGKLGDEERLIFDTITGHYKIKDESDARKKAAQDQAKEAFKKIGIPGARWERDDRKGVENFLDTEPKRKDK
>NZ_CP053452.1|WP_171473638.1|6555087_6556341_+|group-II-intron-reverse-transcriptase/maturase
MAEVKPYAISKQVVWEAYQKVKANHGAAGVDGESIEAFESDLKNNLYKIWNRMSSGSYFPPPVRLVEIPKAGGGLRPLGIPTVADRVAQMVVKMHLEPVVEPHFHDDSYGYRPGKSALDAVATARQRCWRSDWVIDLDIKGFFDNLDHDLVMKAVRHHDKTPWVLLYIARWLKAPVQRQDGSREERTKGSPQGAVVSPLLANLFLHYALDSWMRRTHPGIPFERYADDVIVHATSKAQAEHVLVAIRARLAECGLELHPAKTKIVYCQDSDRKGQHEHIQFDFLGYTFRPRRAKNFRGKPFVSFLPGVSNKAGKAIRATIRDWRLAATRNNQSLEDLAQLVNPSVRGWVNYYGRFYRSALTPVLRHLERALIRWVRRKYKRFRGHATNAAHWLGRVARRDPNLLVLWQVGIRPATGS
>NZ_CP053452.1|WP_171468866.1|6556556_6556904_+|hypothetical-protein
MPAVPAASRRDPAATRRRWAERLERFRRSGQTIAQFCAAEGVSPPSFYVWRRTLADHAPSPVPVTPTLVPIRLTPSPAGPPIEVVFPSGTVLRFPVDARPEVIAALVHAVEGRPC
>NZ_CP053452.1|WP_171468900.1|6556897_6557275_+|IS66-family-insertion-sequence-element-accessory-protein-TnpB
MLSIPPTTQLWYGGAVDLRLGFDGLYRHVQSTLQADPLSGHLFIFTNRSANRLKALYWTRHGLCLWCQRLERGRYHFPTPTDRKLELTATEFAMILDGIDYSSAKRFTRYCRPKASESDLRTRTS
>NZ_CP053452.1|WP_171468899.1|6557288_6558845_+|IS66-family-transposase
MDSDAPLPTDVLTLQGMVRALQAENADLRTQLQRQAEQFQRTIDDLRAEVAALKAKLDRATTHRFGRRSERTPKPPKVPGDGPAKRRHDHGRSPLPAHLERRDTVLDLTPDERRCSGCGGDRVCIGQTQTEQLDCDPTPYFVRRTIRKTYACQQCPPTVRAEDRIRTATPSTVGPIDKGLCGPGLLAEVLVGKFLDHLPLHRQVARIGRAGVTVSESTLGDWVKQSAVLLTSLYQLMLERVRTCPVLWSDDTRSRFAQPGERTMPHGHFWVGIGDPTAPYTAFHFTTGYDAASGPDQFLGGFRGHVHADCLAQYNGLFAAGAKHVACWSHARRKFLGAGDPGAKAVERINRLYHIEHTLPAPDSPEHIVARRATRQARALPILNDLKAWLDAALGTALPKSALGAAIRYVANHWAAFVRYTEDGRLSIDNNLSERTLRLIAVGRSNWKFVGSAKAGAHAAVHFSVVGTCRHLGLDATAYLREVLPALHALGEKPTADQLAPLLPDVWAKRQQSRLLVA
>NZ_CP053452.1|WP_171476164.1|6558997_6559468_-|DUF4102-domain-containing-protein
MPLSDAKARNAKPRTKPYKIADGEGLFLFITPSGSKYWRLKYFFADKEKLLALGVYPEVTLADARERRAQARKVLAAGNDPGEAKKEAKRLTTLKSANAFEVVAREWFEKRNHEWAVSSANTMLAVHTRPKTVGERQPGSAGFGVGWAYATRSRDC
>NZ_CP053452.1|WP_171473639.1|6559757_6560222_-|type-II-toxin-antitoxin-system-VapC-family-toxin
MANRFFDTSAFAKHYRNERGTAKVDALLDEPGSHNFISNLGIIELHSILARLTRSGEITAGDFHLVRGKFLADIASGLWKVIPVTTAHFYHAQQLLVRRGLSHGLRTLDAIQLAVALVNDVLPIDAFVSADSNLCSVAAVERLTVINPEMASHG
>NZ_CP053452.1|WP_171473640.1|6560238_6560475_-|antitoxin-family-protein
MREQIEVIYENGVLRPLGSFLGQFHEHQHLTVTVEDAHEADQWLLDADPTVKLEAVRHALSKTSGTIAQAVHAERAER
>NZ_CP053452.1|WP_171473641.1|6560843_6561047_-|AlpA-family-phage-regulatory-protein
MHDIPELGFLRLTQVLGVIPVGKTCWWEGVRSGRYPKPVKLSARCTAWRVEDIRELINTLSDQAPSH
>NZ_CP053452.1|WP_171473642.1|6561195_6561633_-|hypothetical-protein
MPFPLPVPGQVIRYSYLWRSEYRRGQEEGTKDRPCVVVLLLTDEEGDRVVTVLPVTHTPPSDPLLAVEIPHVTKRRLGLDDERSWVVLTEANRFTWPGPDLCMARPGDPSSVLYGELPGRLLLQIRDRFLAAISAGNAAFVPRTQ
>NZ_CP053452.1|WP_171476165.1|6561637_6561895_-|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin
MVRISSGELQRKIGHIQDLALAQPVTITTNGRDRLVLLSAEEYRRLKRRDRQVMGLEDFTAADLEALRNVRPSTAAAAFDHEVTE

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Crispr_ID: NZ_CP053452_28

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053452_28

6759779-6760014

Orphan

Consensus_repeat	Method
CCCGCGTCCGTCACCTGCGTG	PILER-CR

3 spacers

The CRISPR arrays of NZ_CP053452_28

>merge|NZ_CP053452|28|6759779-6760014|PILER-CR
CCGCGTCCGTTACCGGCGTGAAGGCCAGACCCAGGACCGTGAGCTTTTCGAGCGCGGTGAGCTTCTTGACCCCCGCGTCCGTCACCTGGGTTCCGCCCACGCGCAGCACGGTGAGGTCCTTGAAGAGGACCAGCGTCTCGGCCCCGGCGTCCGTCACCCGCGTGACGCCCAGGTCCAGCACCTTCAGGCCCTTCAGGGCGGTCAGGTCGCGCAGGCCCGCGTCCGACACCTGCGTG

>NZ_CP053452|28|4|6759779-6760014|PILER-CR
CCGCGTCCGTTACCGGCGTGA	AGGCCAGACCCAGGACCGTGAGCTTTTCGAGCGCGGTGAGCTTCTTGACCC
CCGCGTCCGTCACCTGGGTTC	CGCCCACGCGCAGCACGGTGAGGTCCTTGAAGAGGACCAGCGTCTCGGCCCCGGC
GTCCGTCACCCGCGTGACGCC	CAGGTCCAGCACCTTCAGGCCCTTCAGGGCGGTCAGGTCGCGCAGGCCCGC
GTCCGACACCTGCGTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053452.1\|WP_171473780.1\|6756018_6757107_+\|IS630-family-transposase	unknown	unknown	gnl\|CDD\|315923
NZ_CP053452.1\|WP_171473785.1\|6762162_6762483_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171473775.1\|6747731_6748991_+\|IS66-family-transposase	unknown	unknown	gnl\|CDD\|376980
NZ_CP053452.1\|WP_171473778.1\|6753488_6753779_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171473790.1\|6767059_6768214_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|350159
NZ_CP053452.1\|WP_171473786.1\|6762586_6763027_-\|DUF2809-domain-containing-protein	unknown	unknown	gnl\|CDD\|378530
NZ_CP053452.1\|WP_171473791.1\|6768161_6768533_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171473774.1\|6747174_6747417_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171473779.1\|6755255_6755804_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171473783.1\|6760603_6760792_-\|DUF3859-domain-containing-protein	unknown	unknown	gnl\|CDD\|379007
NZ_CP053452.1\|WP_171473788.1\|6766388_6766700_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171473784.1\|6761215_6761866_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171473777.1\|6750653_6752561_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|238121
NZ_CP053452.1\|WP_171473781.1\|6757536_6757968_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379553
NZ_CP053452.1\|WP_171473789.1\|6766729_6767041_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171473776.1\|6749438_6750362_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171473792.1\|6768501_6769572_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171473613.1\|6753920_6755252_+\|transposase	unknown	unknown	gnl\|CDD\|379252
NZ_CP053452.1\|WP_171468881.1\|6748987_6749311_+\|transposase	unknown	unknown	gnl\|CDD\|376980
NZ_CP053452.1\|WP_171473787.1\|6763551_6766359_+\|phage-portal-protein	unknown	unknown	gnl\|CDD\|377468

Protein	Function_ID	Function_description	E-value
NZ_CP053452.1\|WP_171473780.1\|6756018_6757107_+\|IS630-family-transposase	gnl\|CDD\|315923	pfam13358, DDE_3, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	3.19115e-13
NZ_CP053452.1\|WP_171473775.1\|6747731_6748991_+\|IS66-family-transposase	gnl\|CDD\|376980	pfam03050, DDE_Tnp_IS66, Transposase IS66 family. Transposase proteins are necessary for efficient DNA transposition. This family includes IS66 from Agrobacterium tumefaciens.	1.94046e-45
NZ_CP053452.1\|WP_171473777.1\|6750653_6752561_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|238121	cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment.	1.02177e-83
NZ_CP053452.1\|WP_171473786.1\|6762586_6763027_-\|DUF2809-domain-containing-protein	gnl\|CDD\|378530	pfam10990, DUF2809, Protein of unknown function (DUF2809). Some members in this family of proteins are annotated as yjgA however currently no function for the protein is known.	3.9339e-09
NZ_CP053452.1\|WP_171473781.1\|6757536_6757968_-\|hypothetical-protein	gnl\|CDD\|379553	pfam14317, YcxB, YcxB-like protein. The YcxB-like protein family includes the B. subtilis YcxB protein, which is a functionally uncharacterized transmembrane protein. This family of proteins is found in bacteria, and is approximately 60 amino acids in length.	0.00609007
NZ_CP053452.1\|WP_171473787.1\|6763551_6766359_+\|phage-portal-protein	gnl\|CDD\|377468	pfam05136, Phage_portal_2, Phage portal protein, lambda family. This protein forms a hole, or portal, that enables DNA passage during packaging and ejection. It also forms the junction between the phage capsid and the tail proteins.	0.00199716
NZ_CP053452.1\|WP_171473790.1\|6767059_6768214_-\|hypothetical-protein	gnl\|CDD\|350159	cd09008, MTAN, 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidases. This subfamily includes both bacterial and plant 5'-methylthioadenosine/S-adenosylhomocysteine (MTA/SAH) nucleosidases (MTANs): bacterial MTANs show comparable efficiency in hydrolyzing MTA and SAH, while plant enzymes are highly specific for MTA and are unable to metabolize SAH or show significantly reduced activity towards SAH. MTAN is involved in methionine and S-adenosyl-methionine recycling, polyamine biosynthesis, and bacterial quorum sensing. This subfamily belongs to the nucleoside phosphorylase-I (NP-I) family, whose members accept a range of purine nucleosides as well as the pyrimidine nucleoside uridine. The NP-1 family includes phosphorolytic nucleosidases, such as purine nucleoside phosphorylase (PNPs, EC. 2.4.2.1), uridine phosphorylase (UP, EC 2.4.2.3), and 5'-deoxy-5'-methylthioadenosine phosphorylase (MTAP, EC 2.4.2.28), and hydrolytic nucleosidases, such as AMP nucleosidase (AMN, EC 3.2.2.4), and 5'-methylthioadenosine/S-adenosylhomocysteine (MTA/SAH) nucleosidase (MTAN, EC 3.2.2.16). The NP-I family is distinct from nucleoside phosphorylase-II, which belongs to a different structural family.	5.1972e-27
NZ_CP053452.1\|WP_171473613.1\|6753920_6755252_+\|transposase	gnl\|CDD\|379252	pfam13546, DDE_5, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	1.85541e-16
NZ_CP053452.1\|WP_171468881.1\|6748987_6749311_+\|transposase	gnl\|CDD\|376980	pfam03050, DDE_Tnp_IS66, Transposase IS66 family. Transposase proteins are necessary for efficient DNA transposition. This family includes IS66 from Agrobacterium tumefaciens.	3.77472e-09
NZ_CP053452.1\|WP_171473783.1\|6760603_6760792_-\|DUF3859-domain-containing-protein	gnl\|CDD\|379007	pfam12975, DUF3859, Domain of unknown function (DUF3859). This short domain is functionally uncharacterized.	2.01721e-07

>NZ_CP053452.1|WP_171473781.1|6757536_6757968_-|hypothetical-protein
MRFARRDLIVASVAVVGALVACLGLGVDWRYAAALAALGSGLALLVIAVGWAYTRASVAKFRAMSDPTVRWSFGDESFATRSDLGAVELHWKSVSAVWCFPKVWLLFFGTHGWGYSTLPVEGLQPELREYILARIQSHGGKIA
>NZ_CP053452.1|WP_171473780.1|6756018_6757107_+|IS630-family-transposase
MARPKPALILSDDERQKLTTWANRPKSTQRLALRARIVLACADETSNKAVASQLGVCAATVGTWRNRFVAQRLDGLVDEPRPGAPRTVTDADVERVVTATLETKPKAATHWSTRGMAQATGMSQSTISRIWRTFELKPHRADTFKLSTDPYFVEKVRDVVGLYLAPPDRAIVLSVDEKSQVQALDRTQPVLPMTPAQVERGTHDYVRHGTTSLFAALDVATGKVIGTCHRRHRHQEFLKFLDHVDATLPREPGVSVHIVLDNYATHKTPAVKRWFVRHPEYHLHFIPTSSSWLNQVERFFAEITEKRIRRGVFKSVHALEQAITEYLAEHNADPKPFAWVADADSILDRIKRVCERTSDSGH
>NZ_CP053452.1|WP_171473779.1|6755255_6755804_-|hypothetical-protein
MDTAVYSGELNSNANRFGTRSRGSKMVILPRVSEPLLTLYRRSVLAALERQFLFDTSFHNEQWSVDLSEGKLIIKLQQDVGEQSWPIQVLGTQATKSSSWLWAWGNKDSGIPSKLLKSANRMRKYGEKHSIPELTTAEQPLNGLTGHFFALVAVGIGTADAYFAAPYDGGIAFLLAVLSAKL
>NZ_CP053452.1|WP_171473613.1|6753920_6755252_+|transposase
MPSSHTPAPRCPWFSVLAKALDPRSGRRLAALYLGLILAGGRKTLSRWIRAAGLSNQYRRCYATAAAVGRRTEGVATRLLVQVVKPLVGGAPRLVLALDDTPTERHGPKVQGAGVHHNPTPGPAGSPFVYGHVWVVLGLLVTHPLGGLIALPLLARLYIRKKDLGAIPAPDRPEFATKLEMAVALVRWAHGWLKMWAKPVWVVADGAYAKAPVLKPLLALGVTMVSRLRKDAALCSVPEPEPKRRGPRRVYGTQRVSLAKRAGQKGGWATGTFTLYGKAVEKRYKTFEATWRPAGGPIRVVLVDEPKGWVAFFCTDTTATVADILSLVADRFSLETCFRDLKQVVGAGHQQVRGVASNVGCFHLCAWAFTMTEAWAWDRKAEDLVAHRAASPWDDPERRPSHADKRRAWQRELLAEEIQAVVGEHHDPVQIHNLARRCLDLAA
>NZ_CP053452.1|WP_171473778.1|6753488_6753779_-|hypothetical-protein
MRTIGIPPLKRAAVVIPRGVSTIPIMDHRIAVREYLNVLGLNIQEQAHVFLVLEASTPVLRIAFDKQGRMIKFKALVGDVTTPIPAEVTPLLPALD
>NZ_CP053452.1|WP_171473777.1|6750653_6752561_-|sigma-70-family-RNA-polymerase-sigma-factor
MAAELLGAESDRRLVERVLATRDESALLTIVLRHGAMVYHVCRRVLRHPQDAEDAFQATFLVLAQELHTVRKRNSLAGWLHGVALRVSRKARARAAARQRREAGAARPEAVSPDDLTWGEVRSALDDELSRLPDRLRLPLVLCYLEGRTQDEAADQLGWSKSTLRRRLEQARGALGSRLKGRGIAWSAALPAVMASDSLAATATPPTCVDSTVAAALAVVNGKPLALAASAEVTVLTEGVLITMSVTRIGVVAGALIVLTLATAAVGGHFFAAPAAQAEVQPEDGPALPVGSFPMPERASARAEEPKRAEKPEPLTLKGHTGEVWSVCFSPDGKRILTGGGALPRGGAGVAGGAGGDPPGPGEVKVWDAENGTEILALKGHTGMVHGVCFSPDGKRIATAGAFEDETVRVWDAEKGHELFTLKGQTQSTGSVCFRPDGKRIATISLEHVKVWDAGKGQELLTLKADVRPTGSVCFSPNGRRIASVYPWSRFGRSVPAEIKVWDAEKGQELLALKGHTGEVLSVCFSPDGKRLASAGLEDQTVRVWDAEKGEELLALKGHSGPVSSACFSPDGKRIITASWDQTVKVWDAVKGRELLTLKGHTGLVRSVCFSPDGKRLASASGDKTVNVWSLDKEE
>NZ_CP053452.1|WP_171473776.1|6749438_6750362_-|hypothetical-protein
MRGVVIVCGLALAAAGRAEAIDYDKVERRLVKEPAYKTKNPQYALLVFGPEARLRVWVVLDGEALYIDRNGDGDLTAEHNRFAKEADCKSIELRDPDGKTRYVIDRVQTDYSFYTPKVRDERKKKGTPPGLMAYVSIKGGVEYQQYCDIVELSDSPKTAMLAHFHGPLTIAPMTINWKLPESAFLRKGKGPPEFIANVGTLSEKHGCWVVVRTCDEKACLFPDGVRPVVEVEYPAAVGTDPPVKKTYTLNGYRCGAAFRGNLSVPDGVGSGKAKVRLSFDSWKEGRVSPSEVDLPVREAEAGGTERK
>NZ_CP053452.1|WP_171468881.1|6748987_6749311_+|transposase
MKRYLDQGFLALDNNLSERTLRAIALGRNNWGLIGSGAGGQTAAVLYSIVGTCNHVGIDPFAYLREALPGLFTPGEEPTAEQLSDWLPDRWLLNRRPDPTVPDATAP
>NZ_CP053452.1|WP_171473775.1|6747731_6748991_+|IS66-family-transposase
MGATTLAPDAPLPTDAPTLRAMGRELLTELQKLRAESAELKTKLDAALKHRFGRRSERRTPPPVPTTEKPPPKRDDHGRSPLPEHLERREIVHDLTEAERLCPCCGRSRACIGEQSAEQRDLEPAQFIVLRTIKRSYACRHCDPEVVPAEQRIQTAGPAQVGPIAKGLCGPGLLAHAVTAKFAAHTPVHRLAGQLARSGVTIASSTLGDWLFRASELLTPLYELMHTRVLPSRVIHGDDTGVKLRAPGSTRTTKAHLWAYIGDADYPYVLFDFTKGYTADGPTRFLKVTRATSRRTHWPSTKELYGEDKVKHACCSAHARRKFVAASDAGDERAAKALELSASCTLSSGRCRRCCRRRTARWLGSSAVNARSNGAYCDNAMPSPCGTTCRSGLRNRSRVRCRSRRWGRPSGMPRTTGSR
>NZ_CP053452.1|WP_171473774.1|6747174_6747417_-|hypothetical-protein
MTLPKWNSDWEQPDPLRGKRGWSRRHYAALGVAAALLFATFAVLAPAIVRARQKEATLDRAYKDLEAAMGLGVSGTLQPR
>NZ_CP053452.1|WP_171473783.1|6760603_6760792_-|DUF3859-domain-containing-protein
MPGRWHFVRGYEHELVAGEWRLAVFIDDVEVARTVFHVRRPPSRGPTERAARFPLPSARPSR
>NZ_CP053452.1|WP_171473784.1|6761215_6761866_+|hypothetical-protein
MARKPDAGPADEPRPAGPGPLPNLSPKPRDPVGKAAAPAVAAVPKTGLRETPPAGGFIAQTGYREHRKDGAVLIGFEADFGRVFNTDVVTYLRPIWLTPSGEEFGTAYGRAQGPVTTVKAKSGYAVGGIVVAGGGALEGFCLTFMRIGTKGLVANDAYTSDWYGEADRRPRANAMRSGDGSFVVGLYGKRFEDKGGKNFDDGGAIGTIGLVLWTNE
>NZ_CP053452.1|WP_171473785.1|6762162_6762483_-|hypothetical-protein
MSFDPDPDLEPPARARWRVWLIVLVALVVASGALVWLWQKYDPFFMDRPDMREATALLDSGRKRPLTDEEFERAVALLDAATPAAQLSAVATLEADAARQPARRGA
>NZ_CP053452.1|WP_171473786.1|6762586_6763027_-|DUF2809-domain-containing-protein
MLRLLLALAVTVALGLASRLCPAGWFLWDRVLGEVLYAVAAYLALAVLLFRTPPLFVAVIAFVCCVAVELFKLTHIPAENQQVFLVRWFLGMTFSQVNLGYYFIGVVVIAFANGATRGSLLGRETGPGSEWNGNRPEPATVPDPPA
>NZ_CP053452.1|WP_171473787.1|6763551_6766359_+|phage-portal-protein
MTRPTLPSRLRPLGPQAHEPAEIRQLRADLARKTKLVEDTLLSLDNLISPLDWQDAGFGGSGSWRWARPVDRTMDRTHAPLNYLNEQEWRWALAQARDLVQRNHLALGFRDHVANFIGPVDIAFVLRGQSPGATASGPADADGTEPASVHPLVRACTQVWDEWREWADWGQGTHDREAECRRRLIVEGECTLRFFAGDARSDGLPHVRHVEPERIRTPPGHSPLDRHGWGVITGDDDDEDELGLWVCHYQNVSEGKEVPSSEYVRIKGNVDRTVKRGWSDFNPVGEQLRKMMGLLDNVAHVARLQAAIAWWEEYPTATMQQVSSMIYAGQDYARTKLPPSATGADQSVTNYEAGTVVRTEGGREVKPGPVSAPNGFAQVEQMVLRGIGFRWGCPSYFSGDSRDSFASVLVTGSPFVRITESRQEEVKGFARKVACRVLEFAERTGRLPRGASGRVRPVATARPVVMADEEKQARTFLSLYEKSCADPVEFIRKRGGDPKVVAANIAAWQKKFAPPQQPGGDVPGGGLAPSGPAPAPPGSAGGDGSSPNAEPVGEGRWFREETDHEGNPMPTTPAGDGLKWELRDEHRNGGTVKVWHRVKAGSTETGSTGTWGSETPDGAKQTDADTFDSAAAAQKLLNDQLLPSDGEIEKIRKDGAAPSGRNPSKGPERRWERAIAVMLGPGWQASEKKNSADDVTGSVTINGVDCPVIVDGKLSGAAGFSYGQEGPAVRNKLDAASAQPNTIVAFLVAHVTPEGHDGSVASDGVTLRIGVHPQNISWDHDSIKNAGEFGPFQVLTATEYHALRKGDAAIVEKFRSRVFEKLKAIDIDKYNTAQTDASEVQTGRAATSTSQSASTSIKLGADVERVGKNLAKNFAALPTTVKVVQIGATAEELPADEVRKAAAHLSPKQVASLEHLLAEAKAHQNAQSGPNPPPS
>NZ_CP053452.1|WP_171473788.1|6766388_6766700_+|hypothetical-protein
MDAEKALNKLEQDVAEVARAAQRDLDRGVLPEAVGFHLSRITDGLPSEVKVVQIGTLAEGLAGDEVRAAAAGLTDKQIAMIGQLIAAAKAHQDASGDPNPPPN
>NZ_CP053452.1|WP_171473789.1|6766729_6767041_+|hypothetical-protein
MDANEARKQLRRELDELARAAQSDLDLGVDPEVVSSHLARVSDKLPGEAKGVLLGAMLDGLSDEALDAAGNHMTDEELAKMEQFIAVAKSRRSARSGPNPPPG
>NZ_CP053452.1|WP_171473790.1|6767059_6768214_-|hypothetical-protein
MAKSSTASSWSRSVSPSEQALFAQILEELDAFALESAQGTSDTVLLRQFHLRWRAKFGSQGEMLALRVFTIRHARDEGAPMIAIITALPKEFAAVECLLDAVEDIAIPGCGAGRRYTRANLSATSGGSHKVVLALMADMGNNIAAIRAALLLEHFPTVEAIIMTGIAGGIPHPAKLEDHVRLGDIVVSNRNGVVQYDNLKSGRKGKIVVDTVRAAPRPPAAKLLEAVRYLEARALRGVEPWHEHIDRACQSLNIARPSAETDVLHHSTNRQEVITHPDDTRRKPGRPLIFQGPIAAANILLKDPVRRDRLRDAHGVKAVEMEGSGIADATWHADNGYLVVRGICDYCDMSKDDAWQAYAAAIAAAYTIALIASMPATEMKHNGH
>NZ_CP053452.1|WP_171473791.1|6768161_6768533_-|hypothetical-protein
MSQINFEPIAEQHAELAAAIRSIQAWIVRCVGVKFIELKRLARELPAVPSDQLALALDALVFHDQLREVFRVRDPHRDLLPENYDNPTEIPDKLLSRDDQFAFALEDGEIIHGFLLEPKRVAI
>NZ_CP053452.1|WP_171473792.1|6768501_6769572_-|hypothetical-protein
MSSSESIFKLLDEEATLTELQRLLRTIRQEGATEVRVPRRAEDVLHELRKALTGQFITQERLLAALQDAEENGNQHVMYYSPLKGKGKLIADGEAVAEAIFETKNWRDQHQFPKLTLIPSTAFTWADFRIGLAGKPHDWVAKFYDREVRHEDVPEDQVRKWIEGQTGTRVDPTWKFAVTKEVPYRSIVLARWNHPDVLELRVSRRGVVSRTTIALREEAIWTRIAKAVKQSDLTGWDLTPVRNNMMRAEANGATTFRTSRTNLRTAMGTRAEFHRPTDEETLSADDVAVRSIVGLINEGGDCQANTVNFLADQSSGILEQDLQVIVGAARPNEIVIRSEASSQAVDYVTDQFRAYR

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Crispr_ID: NZ_CP053452_29

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053452_29

6776307-6776408

Orphan

Consensus_repeat	Method
GGCTTTCCAGCCTGTGTACCTGGAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP053452_29

>merge|NZ_CP053452|29|6776307-6776408|CRISPRCasFinder
GGCTTTCCAGCCTGTGTACCTGGAAGCACAGGCTGGAAAGCCTGTGCCACGAAAAACCGTCCTGTGTTTGTGGGACGGGCTTTCCAGCCTGTGCACCTGGAA

>NZ_CP053452|29|28|6776307-6776408|CRISPRCasFinder
GGCTTTCCAGCCTGTGTACCTGGAA	GCACAGGCTGGAAAGCCTGTGCCACGAAAAACCGTCCTGTGTTTGTGGGACG
GGCTTTCCAGCCTGTGCACCTGGAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053452.1\|WP_171473798.1\|6776479_6776851_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171470556.1\|6779094_6780141_+\|IS630-family-transposase	unknown	unknown	gnl\|CDD\|315923
NZ_CP053452.1\|WP_171473790.1\|6767059_6768214_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|350159
NZ_CP053452.1\|WP_171473791.1\|6768161_6768533_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171473795.1\|6771567_6772737_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171473799.1\|6776872_6777949_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171473793.1\|6769871_6770417_+\|GNAT-family-N-acetyltransferase	unknown	unknown	unknown
NZ_CP053452.1\|WP_171473802.1\|6778530_6778980_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171473796.1\|6772830_6773604_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171473792.1\|6768501_6769572_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171473801.1\|6778178_6778523_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171473805.1\|6780959_6781334_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171473804.1\|6780471_6780957_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171473789.1\|6766729_6767041_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171470138.1\|6774281_6775328_+\|IS630-family-transposase	unknown	unknown	gnl\|CDD\|315923
NZ_CP053452.1\|WP_171473797.1\|6773810_6774224_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171473806.1\|6781340_6781817_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171473803.1\|6780231_6780468_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171473794.1\|6770893_6771445_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171473800.1\|6777962_6778175_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP053452.1\|WP_171470138.1\|6774281_6775328_+\|IS630-family-transposase	gnl\|CDD\|315923	pfam13358, DDE_3, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	2.40945e-35
NZ_CP053452.1\|WP_171473790.1\|6767059_6768214_-\|hypothetical-protein	gnl\|CDD\|350159	cd09008, MTAN, 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidases. This subfamily includes both bacterial and plant 5'-methylthioadenosine/S-adenosylhomocysteine (MTA/SAH) nucleosidases (MTANs): bacterial MTANs show comparable efficiency in hydrolyzing MTA and SAH, while plant enzymes are highly specific for MTA and are unable to metabolize SAH or show significantly reduced activity towards SAH. MTAN is involved in methionine and S-adenosyl-methionine recycling, polyamine biosynthesis, and bacterial quorum sensing. This subfamily belongs to the nucleoside phosphorylase-I (NP-I) family, whose members accept a range of purine nucleosides as well as the pyrimidine nucleoside uridine. The NP-1 family includes phosphorolytic nucleosidases, such as purine nucleoside phosphorylase (PNPs, EC. 2.4.2.1), uridine phosphorylase (UP, EC 2.4.2.3), and 5'-deoxy-5'-methylthioadenosine phosphorylase (MTAP, EC 2.4.2.28), and hydrolytic nucleosidases, such as AMP nucleosidase (AMN, EC 3.2.2.4), and 5'-methylthioadenosine/S-adenosylhomocysteine (MTA/SAH) nucleosidase (MTAN, EC 3.2.2.16). The NP-I family is distinct from nucleoside phosphorylase-II, which belongs to a different structural family.	5.1972e-27
NZ_CP053452.1\|WP_171470556.1\|6779094_6780141_+\|IS630-family-transposase	gnl\|CDD\|315923	pfam13358, DDE_3, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	1.31073e-34

>NZ_CP053452.1|WP_171470138.1|6774281_6775328_+|IS630-family-transposase
MAITLPDSRGLSDEVLQALRLRALHGIESGFSQADVARLLGVAGETVSRWWTAYTAGGLQALPQERTGRPVGTGRTLSDEQGAHLQLLLDTKSPSDLGIAAPVWNRRAVRDLILNEYGLRVPIRTVGEYLRRWGYTAKKPSRHARKQDPDEVREWLEQTYPAIEKLARAERATMFWCDETGTAADAYPGYGYAREGQRATIEVPDPHIRMNMVSGISNTGDVRFLTYSGTMTAERFITFLKQLLTTVPGTIFVIVDNLPAHAKDAVVAWVQQHEDRLAVFYLPRYSPELNPDEYLNNDLKGQVHDAGLPDTSKTLRSRIQRFMHKLLMLPKHVMSYFLHPKVNYCASG
>NZ_CP053452.1|WP_171473797.1|6773810_6774224_+|hypothetical-protein
MGIDFKKLVTEARRYPDEVLGRVSDQRSLKEGHAVRTGGVISQALKERSMRSDDLDLGALFRACYGEHNFFRCRDDMEGGTQLARELMQRARTDERRVQEAGGAGTSDAFLNITQQFAYSKILDAYYLGKEVAQGVT
>NZ_CP053452.1|WP_171473796.1|6772830_6773604_+|hypothetical-protein
MRIAQLPFELRQKRDVVLFDDFARGFDTTYCWGTVLSGSGTAAAAGGIVSLTDVSTTANDELYVYSRQALFQPGNQGAVVQNLYMEATVQWVEANTNQLNLFFGIMSNVATGALVTANGGLRATGTAIGLRKQGGGTNWIAHAQNPSGVSSALDDLSATPAGNSTSYTTLGINVFVQGSLTGAALGSWAEISYTVDGVLLRYNSNPQQVIKHQIDLTGLPNAQLCLLARTGTTATSAEVVNIDYLHANIVRAYQPAE
>NZ_CP053452.1|WP_171473795.1|6771567_6772737_+|hypothetical-protein
MPAKLITERVAAPFAGAGVNRDAGTISGVLLCGTVSSNGRDYPVAVFRRDYARYEGRPVNCDHGRDATVDRRFGWFTSVRPGSDGRPRGTLHCLKSHPMYERVMEAAERNPALFGFSHVAMCQTRLANGREVVESIDAVESIDLVAEPATTKGLFEGKGMSLTVRRLCEALVRHPWTRSAQVRPLKRLGEMDGMDTAPSGVAAPPPDDADPSASVKSAFCSAIMAVVTRALDGDEDPKEALRKIKEMIASHDRMKSDPDEADDDETADADTDTDSDYEAGSGDDTAPPGAEGRRVLGPALREARTICESIGFARAALDDLILVAAVPRASRESLARRLKEASAPERPTSAGRGRLSEDVLATTHRGARPDAPPVTDPKAFARLVESSNN
>NZ_CP053452.1|WP_171473794.1|6770893_6771445_-|hypothetical-protein
MKKLVVGAVLACAGCFARPTELASWGSETRSTSFYTENGLFHLRCAEQRRNDREYLVILVAGGEFMRASGVPQGMGHLHGSGRIRCADGRDIDWASDTRDGARGKVVIGEQTLRLEDGGLVLVDVRGGKVVIDQLAVELSQFDSDAAPEPQAFNAGITYEQLKAIGETEPRMAAFIKACEARK
>NZ_CP053452.1|WP_171473793.1|6769871_6770417_+|GNAT-family-N-acetyltransferase
MTRSLAPTLRAAEPADWAFLDHLQRRYHHAIGYLSRAALAEAIDRRRVLLALENGEPAGYVYGKAHYQRRADVAIIFQAAVSYDARRRLLGTALVDAFARSLAPSVNQMCLWCATDLDASLFWSALGFRAVASRDGARRSRRTHALWCRHVHDAQGPFWIPESTRGGVMREVRSVQPMPTG
>NZ_CP053452.1|WP_171473792.1|6768501_6769572_-|hypothetical-protein
MSSSESIFKLLDEEATLTELQRLLRTIRQEGATEVRVPRRAEDVLHELRKALTGQFITQERLLAALQDAEENGNQHVMYYSPLKGKGKLIADGEAVAEAIFETKNWRDQHQFPKLTLIPSTAFTWADFRIGLAGKPHDWVAKFYDREVRHEDVPEDQVRKWIEGQTGTRVDPTWKFAVTKEVPYRSIVLARWNHPDVLELRVSRRGVVSRTTIALREEAIWTRIAKAVKQSDLTGWDLTPVRNNMMRAEANGATTFRTSRTNLRTAMGTRAEFHRPTDEETLSADDVAVRSIVGLINEGGDCQANTVNFLADQSSGILEQDLQVIVGAARPNEIVIRSEASSQAVDYVTDQFRAYR
>NZ_CP053452.1|WP_171473791.1|6768161_6768533_-|hypothetical-protein
MSQINFEPIAEQHAELAAAIRSIQAWIVRCVGVKFIELKRLARELPAVPSDQLALALDALVFHDQLREVFRVRDPHRDLLPENYDNPTEIPDKLLSRDDQFAFALEDGEIIHGFLLEPKRVAI
>NZ_CP053452.1|WP_171473790.1|6767059_6768214_-|hypothetical-protein
MAKSSTASSWSRSVSPSEQALFAQILEELDAFALESAQGTSDTVLLRQFHLRWRAKFGSQGEMLALRVFTIRHARDEGAPMIAIITALPKEFAAVECLLDAVEDIAIPGCGAGRRYTRANLSATSGGSHKVVLALMADMGNNIAAIRAALLLEHFPTVEAIIMTGIAGGIPHPAKLEDHVRLGDIVVSNRNGVVQYDNLKSGRKGKIVVDTVRAAPRPPAAKLLEAVRYLEARALRGVEPWHEHIDRACQSLNIARPSAETDVLHHSTNRQEVITHPDDTRRKPGRPLIFQGPIAAANILLKDPVRRDRLRDAHGVKAVEMEGSGIADATWHADNGYLVVRGICDYCDMSKDDAWQAYAAAIAAAYTIALIASMPATEMKHNGH
>NZ_CP053452.1|WP_171473789.1|6766729_6767041_+|hypothetical-protein
MDANEARKQLRRELDELARAAQSDLDLGVDPEVVSSHLARVSDKLPGEAKGVLLGAMLDGLSDEALDAAGNHMTDEELAKMEQFIAVAKSRRSARSGPNPPPG
>NZ_CP053452.1|WP_171473798.1|6776479_6776851_+|hypothetical-protein
MTAAETATEDPELKALVDQGAPKSKSKVVPQPGAAGVCEEYHRAQPHLGLKRFYVRALNAECHVGKYLLAPDPATAEKLYTAAVAEHLAAVGYAKNPKTGGWQKDDADRGAAGLVLRTEPLTD
>NZ_CP053452.1|WP_171473799.1|6776872_6777949_+|hypothetical-protein
MAQSVADGQLPTAPAALYTVPAAPAQLSYQATVNCFNTSASLMQTVVITATRAATGNTRTIHRAVLAPNEKLVVQGIPVATGDSLNGYTTTVAAVDYVVTTTGTDVPLTGTSFDANGAIKQVNSGIAGNQAVSGNLTVQGLIYESGAVVAPYSGGGQANATQLASEINKVTASVAASAPYDSLKLPASAAGLDIIVVNTSPNSIQVFGSGADTINAQTATVGVTQMAQSVALYTCAAAGTWQTEGIGGGYSASFQTVSNVSGLTAHAGGGQGTATALTAMNNRVTTVATTGDSVILPTNFPGMVIGVFNAGANACNVFPDTGSNINGASANAAYALASGKNAVFYCLASGVWHAISGT
>NZ_CP053452.1|WP_171473800.1|6777962_6778175_+|hypothetical-protein
MQEWQLIQTALINVAQQLADMTASPKPTYSMDGKSISWGEHFNNLLASQQKLREQLQKAQGPFTLTSVAR
>NZ_CP053452.1|WP_171473801.1|6778178_6778523_+|hypothetical-protein
MAIDLSTEYLWIDDPLTVTYAVKTAEGTWANGQFVPYAQRSAPSLKDFKADPAIQKTDAFFHLWTANLNGIVPRMGDKLTDPAGVVWVVREVDLLDRDVSGVQRYRCRCIAQLV
>NZ_CP053452.1|WP_171473802.1|6778530_6778980_+|hypothetical-protein
MPAPPDVLAAILTDFRTLIAGLSLGPPVVVRKGAKKEPGVDAATQITISKAVEAERKIKIAFGHLATVWPIEVTLIAPNNDDFVTNMGTYSSYRQQIAALFGPPYASPLLPTAPGVYNLAIRPKDYLNRGDMANNVDRWTLVVDVYTAI
>NZ_CP053452.1|WP_171470556.1|6779094_6780141_+|IS630-family-transposase
MAITLPDSRGLSDDVMQALRVRALHAIESGFSQADVARVLGVAGETVSRWWTAYTTGGLDALPQDRTGRPVGTGRTLSDTQCAHLQQLLDTKSPADLGIAAPVWNRRAVRDLILKEYGLRMPIRTVGEYLRRWGYTAKKPSRHARKQDPDEVREWLEQTYPAIEKLARVERATIFWCDETGVAADAYPGYGYARAGERATIQVPDPHIRINMVSGISNTGEVRFMTYAGTMTAERFIAFLKQLLATVPGAIFVIVDSLSAHTTETVATWVQEHEERVAVFYLPRYSPELNPDEYLNNDLKGNVHDAGLPDTSKTLRSRVQRFMHKLLMLPKHVMSYFLHPKISYCSSD
>NZ_CP053452.1|WP_171473803.1|6780231_6780468_+|hypothetical-protein
MAIPIEGMVGYIRSRPKRNGPPKKGPDGKPLPAELELWIDQTVLLTTTPTGPVVSKPADCTGILYSVNGKLVVEYPEV
>NZ_CP053452.1|WP_171473804.1|6780471_6780957_+|hypothetical-protein
MPISTLSANMVVQWALTHTNTGGFAPTTQGPDGVEYNLADLNTIFDQLYSASLTVNPSSTTTLDLTSLTNLVDESLSFTALLFLFALPSGAALSVGPGASNGLQIFGGTGVAVGVPVNGALFWGGDPAGAGLTVNSTNKTLAFRNAGAGTLTLDLVLAGDA
>NZ_CP053452.1|WP_171473805.1|6780959_6781334_+|hypothetical-protein
MTFNPLSGVTGSVSIGATAFAFTKWTLEMKCVVVKANNFTGGGYQQVVAGMVSASLTLEADTYDQGNMAFSVGETYDFVLGYTSEVNVTVHVLIESISPTVDYENGQPIKISGQSNGSFDAGIS
>NZ_CP053452.1|WP_171473806.1|6781340_6781817_+|hypothetical-protein
MSVLTTLVGGHYALTAGDKTYRVKSLIDQQMQADFARWHFERAVGELLAARALYSDAEFAAEREKLRADHRAGRYDFKSARGAELLGTPPGVAFILAQLVEGLDPAAAPELVAQCQEDVTVLLQQIVSDSFPEAIGLAKKKALLTEPVRTARPKPRKG

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Crispr_ID: NZ_CP053452_30

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053452_30

7237472-7237583

Orphan

Consensus_repeat	Method
ACGAACTTGGGGGCCACGGCCCGCGGGGCGGGCGCGAGGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP053452_30

>merge|NZ_CP053452|30|7237472-7237583|CRISPRCasFinder
ACGAACTTGGGGGCCACGGCCCGCGGGGCGGGCGCGAGGGGCGGCGCGTCCGCGTTGTTGAACTTCGGCGCAACGAACTTGGGGGCCACGGCCCGCGGGGCCGGCGCGAGGG

>NZ_CP053452|30|29|7237472-7237583|CRISPRCasFinder
ACGAACTTGGGGGCCACGGCCCGCGGGGCGGGCGCGAGGG	GCGGCGCGTCCGCGTTGTTGAACTTCGGCGCA
ACGAACTTGGGGGCCACGGCCCGCGGGGCCGGCGCGAGGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053452.1\|WP_171474136.1\|7227895_7230709_-\|zinc-dependent-metalloprotease	unknown	unknown	gnl\|CDD\|379818
NZ_CP053452.1\|WP_171474146.1\|7242412_7245034_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|274350
NZ_CP053452.1\|WP_171474143.1\|7239150_7239501_-\|four-helix-bundle-protein	unknown	unknown	gnl\|CDD\|274132
NZ_CP053452.1\|WP_171474134.1\|7225238_7226879_+\|alpha-D-glucose-phosphate-specific-phosphoglucomutase	unknown	unknown	gnl\|CDD\|100094
NZ_CP053452.1\|WP_171474149.1\|7246165_7246303_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171474150.1\|7246593_7247547_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171474148.1\|7245595_7246144_+\|peptide-methionine-(R)-S-oxide-reductase-MsrB	unknown	unknown	gnl\|CDD\|234692
NZ_CP053452.1\|WP_171474135.1\|7227083_7227773_+\|6-phosphogluconolactonase	unknown	unknown	gnl\|CDD\|376480
NZ_CP053452.1\|WP_171474139.1\|7232442_7233852_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226256
NZ_CP053452.1\|WP_171476196.1\|7235757_7235964_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|183426
NZ_CP053452.1\|WP_171474140.1\|7234037_7234229_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171474141.1\|7234289_7235588_-\|PQQ-like-beta-propeller-repeat-protein	unknown	unknown	gnl\|CDD\|379140
NZ_CP053452.1\|WP_171474138.1\|7231840_7232320_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171474137.1\|7231095_7231809_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171474133.1\|7222492_7224982_+\|glycogen/starch/alpha-glucan-phosphorylase	unknown	unknown	gnl\|CDD\|340853
NZ_CP053452.1\|WP_171474147.1\|7245138_7245435_+\|zinc-ribbon-domain-containing-protein	unknown	unknown	gnl\|CDD\|197903
NZ_CP053452.1\|WP_171474151.1\|7249347_7250301_+\|DUF1559-domain-containing-protein	unknown	unknown	gnl\|CDD\|284919
NZ_CP053452.1\|WP_171474142.1\|7237760_7239119_-\|DUF1501-domain-containing-protein	unknown	unknown	gnl\|CDD\|369346
NZ_CP053452.1\|WP_171474145.1\|7241674_7242139_-\|TIGR03067-domain-containing-protein	unknown	unknown	gnl\|CDD\|274415
NZ_CP053452.1\|WP_171474144.1\|7239657_7241313_-\|DUF1553-domain-containing-protein	unknown	unknown	gnl\|CDD\|377872

Protein	Function_ID	Function_description	E-value
NZ_CP053452.1\|WP_171474143.1\|7239150_7239501_-\|four-helix-bundle-protein	gnl\|CDD\|274132	TIGR02436, S23_ribosomal_protein, four helix bundle protein. This family describes a protein of unknown function whose structure is a bundle of four long alpha helices. Some of the first members of this family were found encoded in the (atypically large) intervening sequence (IVS) of Leptospira 23S RNA, a region often present in the rRNA gene and removed during rRNA processing without re-ligation. However, this location is not conserved, and naming this protein as a 23S RNA protein is both confusing and inaccurate.	3.2676e-25
NZ_CP053452.1\|WP_171474134.1\|7225238_7226879_+\|alpha-D-glucose-phosphate-specific-phosphoglucomutase	gnl\|CDD\|100094	cd05801, PGM_like3, This bacterial PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the alpha-D-phosphohexomutase superfamily. The alpha-D-phosphohexomutases include several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.	0
NZ_CP053452.1\|WP_171474148.1\|7245595_7246144_+\|peptide-methionine-(R)-S-oxide-reductase-MsrB	gnl\|CDD\|234692	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB.	1.0056e-85
NZ_CP053452.1\|WP_171474135.1\|7227083_7227773_+\|6-phosphogluconolactonase	gnl\|CDD\|376480	pfam01182, Glucosamine_iso, Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase.	3.37785e-56
NZ_CP053452.1\|WP_171474139.1\|7232442_7233852_+\|hypothetical-protein	gnl\|CDD\|226256	COG3733, TynA, Cu2+-containing amine oxidase [Secondary metabolites biosynthesis, transport, and catabolism].	9.87744e-17
NZ_CP053452.1\|WP_171476196.1\|7235757_7235964_-\|hypothetical-protein	gnl\|CDD\|183426	PRK12309, PRK12309, transaldolase.	2.60233e-05
NZ_CP053452.1\|WP_171474146.1\|7242412_7245034_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|274350	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.	3.55387e-17
NZ_CP053452.1\|WP_171474136.1\|7227895_7230709_-\|zinc-dependent-metalloprotease	gnl\|CDD\|379818	pfam16313, DUF4953, Met-zincin. This is a family of uncharacterized proteins that carry the highly characteristic met-zincin mmotif HExxHxxGxxH, the extended zinc-binding domain of metallopeptidases.	2.1591e-82
NZ_CP053452.1\|WP_171474141.1\|7234289_7235588_-\|PQQ-like-beta-propeller-repeat-protein	gnl\|CDD\|379140	pfam13360, PQQ_2, PQQ-like domain. This domain contains several repeats of the PQQ repeat.	1.10483e-17
NZ_CP053452.1\|WP_171474133.1\|7222492_7224982_+\|glycogen/starch/alpha-glucan-phosphorylase	gnl\|CDD\|340853	cd04300, GT35_Glycogen_Phosphorylase, glycogen phosphorylase and similar proteins. This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.	0
NZ_CP053452.1\|WP_171474147.1\|7245138_7245435_+\|zinc-ribbon-domain-containing-protein	gnl\|CDD\|197903	smart00834, CxxC_CXXC_SSSS, Putative regulatory protein. CxxC_CXXC_SSSS represents a region of about 41 amino acids found in a number of small proteins in a wide range of bacteria. The region usually begins with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One protein in this entry has been noted as a putative regulatory protein, designated FmdB. Most proteins in this entry have a C-terminal region containing highly degenerate sequence.	1.52326e-09
NZ_CP053452.1\|WP_171474151.1\|7249347_7250301_+\|DUF1559-domain-containing-protein	gnl\|CDD\|284919	pfam07596, SBP_bac_10, Protein of unknown function (DUF1559). A large family of paralogous proteins apparently unique to planctomycetes.	1.61438e-52
NZ_CP053452.1\|WP_171474142.1\|7237760_7239119_-\|DUF1501-domain-containing-protein	gnl\|CDD\|369346	pfam07394, DUF1501, Protein of unknown function (DUF1501). This family contains a number of hypothetical bacterial proteins of unknown function approximately 400 residues long.	6.38989e-116
NZ_CP053452.1\|WP_171474145.1\|7241674_7242139_-\|TIGR03067-domain-containing-protein	gnl\|CDD\|274415	TIGR03067, Planc_TIGR03067, Planctomycetes uncharacterized domain TIGR03067. This domain occurs in several species, mostly from the Planctomycetes division of the bacteria. It is expanded into a paralogous family of at least twenty-five members in Gemmata obscuriglobus UQM 2246. This family appears related to TIGR03066, which also is expanded into a large paralogous family in Gemmata obscuriglobus. [Unknown function, General].	7.49101e-23
NZ_CP053452.1\|WP_171474144.1\|7239657_7241313_-\|DUF1553-domain-containing-protein	gnl\|CDD\|377872	pfam07583, PSCyt2, Protein of unknown function (DUF1549). A family of paralogues in the planctomyces.	5.92398e-43

>NZ_CP053452.1|WP_171476196.1|7235757_7235964_-|hypothetical-protein
MDRNGDGDLSRGEFIGTRSEFDEIDTDRDGLISLDEAEAWDNRLRPKDGPPAAPPPKGKTTTNGTGPK
>NZ_CP053452.1|WP_171474141.1|7234289_7235588_-|PQQ-like-beta-propeller-repeat-protein
MTLRVPFLACVFLAAATATAADWPGFRGPNRDGISTETGLLKKWPEGGPPKLWTAKDLGLGWGTPSVAGGKIFGIGTRDGKDGVWALKEGDGKELWFTPFADPAKGLAPQTNGPASTPTVHDGKVYAVSANGTLSCLSADTGKLVWKKNYVDEFDGKVPTWAYTDSVLVDGDKVICTPCGTKGAVVALSAANGDEVWKTEVNPIGGGYGYSSPIKATIGGVPMYIALLGQKSGIVGVEAATGKLLWQYKGTPAAGGVAQIPIPIVKGDHVWVSTSYGGGAALLQIVPKGKEFEVKEVKAYKKPELNNHHGGMVLVGDYVYFGHDQNQGYPVCVEFKTGEIVWGPEKKEVAGGKGSAAVLYADGRLYYRYQNGVLVLIEPSPEGLKVVSSFKLPAADVTKYPQSWPHPVIANGKLYIRDQNVMYSYDLRAAGN
>NZ_CP053452.1|WP_171474140.1|7234037_7234229_+|hypothetical-protein
MDVSIDSLFARIGRQLIEIEMLRAQVAAKDQAVATAEAEVARLQQENATLKSSAKPKWTEGDA
>NZ_CP053452.1|WP_171474139.1|7232442_7233852_+|hypothetical-protein
MRSYFPRVTALRAGFLLTFAAGLLAFGSTAQPNVPAAQPDRDPTVKPPAGPVFPPNTVKQGFPAAGYDPAAPEQSDTCWEVEWELTHPQNRPYYPPGSVPRIKSAKFMWKDKSGTPRWVTVVRMLEIAEIYVPYDNGNTAFLDVHDMSFHTNPARREFLGPPCVAPGEVLRSANPAWSGTIHKEVHDDGIRWMSAETNGRNQIADRVRRGEKMLLWATYYGANYRYMIEYGFADDGTITCRIGPSGRNIFNRQKDRSDTHLHVGCWRMEMDLGDPVRKIGGPKDNEVLIARRVLDEEKEKFAQVAKPFNRNGRGEACEGSAKWVPEEFTTLRVASTVRKNSHGYPLAYDVVSQRLGGIRQLQREGGTYDADMDFINHDFWVTRTESGFTDYIDVPRYAKERRPLTGMPTTIWLCTPALHVARTEDFGTDTGTNSYGGVAITTWAGFVLKPRDLFDGTPLYTPTSSRRFP
>NZ_CP053452.1|WP_171474138.1|7231840_7232320_+|hypothetical-protein
MFVIPTAYKSKLPKGLSWPLGAEAISAGLADAPHATALSLWFTVDVTRPASAFQRLLQDALPYTILVAEYRPASRAGYSGSTSMVESGWYEAKWRLDVSPVPRALRAAAGAALRETGLPAITEWLRSSGQEGWGLRRQRAELVFAPATGTITPQVKEGA
>NZ_CP053452.1|WP_171474137.1|7231095_7231809_+|hypothetical-protein
MTHPVRVLAQSVAVGLLCAIGPASRAADERELPAAFSPEQKTNVLKFLKDHEKPERYVPKGARFADSPPPDADLEITATKDKPVRQYTVQITPHRPVPDQEKIGKADVYFYRPNPEKGKPGITIKHTIDLATGKQIGETEVLTKAHTPVSHEELTEAVAAARSKVAAVKDLYETYPAGSVRWEYLQMKIQRKTEQFEPGDRVVRFVFTATPAEGQKAPEPVGVLVNLTKDTVARDSR
>NZ_CP053452.1|WP_171474136.1|7227895_7230709_-|zinc-dependent-metalloprotease
MKRPLRLALGLVAVAVVGHLTSVPSRGQPPDGGEFPFPGEFRRPDPMLVEFQSISKGAKTHEGLFKLYHKDDKVYAELLPHHMGKQLLCPIAVARGAGMGGSTLNFDDQWVVYFKRAGDKVHLVRRNVHHKANAGTPTALAVDITYTDSVLLSLRIAGLNQMTQGVLINLNDIFMSDFGELGIGRFDSSRSVWHKVKAFPKNLELQIQATYAGGRANDGVIDDRGTTVVVHYGLVELPSGGYQPRVADDRVGHFITAVKDFSSTSKDTTFVRYVNRWRLEPSEPAGTGRLSVPKRSIKFYIEKTVPHEFRAAVQEGILEWNKAFEKIGFRNAIEVVQQRDDEEFDPEDMNYNTFRWITTDNAFAIGPSRANPLTGEILDADILFDADFIRYWKQERKLQGADGKSLEAVSPLQALDAGLGLDHDLLNRTAGWAEPPRARNPEAARLAAIRQGVCDCRGCLKMELGMAAMSLADVAAGTDKDPKDKGPKDKDAKDKGAKDKDKEKDKALDEMINQAIKWVVMHEVGHTLGLRHNFKGSTMLTSAQLHDKAVTGTKGLTGSVMDYLPVNLAPKGVKQGDYFPTCLGPYDYWAIEYAYKPLSSNEAEELKKIAARGASTPGLDYGTDEDTVLTADPLINRFDLGDDVLAFARSRMLTTEDLLKTMATRAVEDGEGHQRVRVAFGLLLSQYGNGAYLMSKYVGGEHAYRDHRNDPSGRDPLVPVDPAKQREALKFLQEHVFSDKPFEYPPELLRKLAVDRWTHWGADFAATDFPLYDRVLGIQRLALNQLLNPRALQRVQVNALKAEKGAKPVTVAEVFRSTTDAVWADLPAGKKDKEHPSSIVRRNLQREHLKKLSGLVLGEKSVASGIWFSSEMFETRSAAVPPDARSLARYHLREIGKRIDAALAARPADADETTVAHLEECKERIAKVLSASMQAND
>NZ_CP053452.1|WP_171474135.1|7227083_7227773_+|6-phosphogluconolactonase
MNIDVLPDADATARKAAEVLAAEARKAHAARGRFVFAVSGGTTPWQMLRHLATQDVPWGSVYVAQVDERVAPDGHADRNLTHLRESLLAHAPIRPEQILAMPVNDPDLDAGAAHYARTLEALAGTPLTLDLVHLGLGADGHTASLVPNDPVLDVTDRDVATTNEYQGRRRMTLTYPALDRARVVLWLATGAGKAEMLARLKAADRSIPAGRVRQGAAVVLADRDAAKGL
>NZ_CP053452.1|WP_171474134.1|7225238_7226879_+|alpha-D-glucose-phosphate-specific-phosphoglucomutase
MSISPLAGKPVPKDLLIDVAALERAYYERRPDLGNPNELVAFGTSGHRGTPGNGTFTESHILAITQAICDYRRGQGITGPVYMGKDTHALSAASQRTALEVLAANATETIIQRDDGVTPTPVISRAIIVHNRGRASGLADGIVITPSHNPPEDGGFKYNPTNGGPADTDVTKWVQDRANELLRAHNAAVKRVPVESALRAATTRHEDFVQPYVDDLRNVIDMDAIRGAKLELGVDPLGGAACGYWAPINSTYGLNIEVTNPVIDPTFSFMTVDHDGKVRMDCSSPYAMARLVELKDRFRVAFANDPDSDRHGIVTPGAGLMNPNHYLAVAIRYLLTHRPGWRADAAVGKTLVSSGLIDRVVNKLGRKLWEVPVGFKWFAPGLFDGSVCFGGEESAGASFLRKDGTVWTTDKDGPILCLLAAEITAVTGKDPGEHFAEIAGEFGRPSYTRIDAPATPEQKAKLSKLAPESVTAADLAGEPITQKLTRAPGNGAAIGGLKVVSAGGWFAARPSGTENVYKVYAESFRGPAHLDRIVAEAQQIVSAALK
>NZ_CP053452.1|WP_171474133.1|7222492_7224982_+|glycogen/starch/alpha-glucan-phosphorylase
MPTENTKAAATAPRPAPATAGPVRFAGDPNASYERRLVLDHVVAPGAATLHQRFAAVARAVRDLLTERWLETREAYNRANPKRIYYLSMEFLIGRSLTNNITNLMAEPVVREAMEREKLDLMELAAEEPDAGLGNGGLGRLAACFLDSMATLQLPAMGYGLRYEYGIFRQEIENGTQVERPDNWLRRPDPWEVVRPLRTVEARINCSVHIRNGAPQLEPNQPRVLVGVPFDRPVVGYGGRTVNTLRLWGAAAPDFFDLGEFNHGDFFGAVLDRVTAENLTRVLYPDDSTDAGRRLRFVQEFFLVACSLADILRRFREGNNDWHTLPDKVAIQLNDTHPALAVSELMRVLVDDVKLGWDESWDLTVRTLAYTNHTLLPEALERWPVGLFELVLPRHLEIVFEINRRFLDTVRAKYPGDEGKVARASIIEEGATRAVRMAHLAIVGTHSTNGVAAIHSELLRTRTVKDLADVFPERFGNKTNGVTPRRWLNLCNPALANLITDAIGDEWVTDLAKLRALVPLADDPSFRAAFRRAKEAAKTRFTDWLQGATGLVVNPVSIFDCQIKRIHEYKRQLLNVLQIIVLYNRFRADPNAPIPPRTFFFAGKAAPAYTLAKLIIKLINSVAGVVATDPAVRGRLQVVFLAEYNVSLAERLIPAADVSEQISTAGYEASGTSNMKFMMNGALTVGTRDGATIEMAQEAGEENFFLFGLTAEQVATSRGWYDPHWHYNHDPETRAALDMIGSGHFSGGDPNVFRPIWDVLLTKGDNYMHLADLGPYVRTQERVAELRADPDGWARKAILNVAHSGRFSSDRSITEYATQIWNAKPCPVG
>NZ_CP053452.1|WP_171474142.1|7237760_7239119_-|DUF1501-domain-containing-protein
MAAPRSSLRAPHSVLRAPLDRRHLLRVGAVSTAVSMSGWMGRLARAAEEKKVKPKRSCILLWMFGGPSTIDLWDLKVGHENGGPYKEIEAAPDLKICEHLPKIAKHGKSLAVLRGMSTKEGDHIRGEYLMKTGQLPGAAGIQYPGIGALVAKELGDPRAELPNFVSIAPQRFVAQDANGPGFLGPVHAPLVVGDNQFNNNVPAGNIDAVLKVADLDRRKGIDEPTAAARLDLLREVQDDFAAGRPGSIARSHAAAYDRAVRLMQSDGGKVFDLTAEKDATRDKYGRNLFGQGCLLARRLVEKGVPFVEVTLGNWDTHGQNFDQVKGLCGTLDAAWAALMDDLKDRGLLETTTIVWMGEFGRTPKINAQKGRDHFPNAWSTVLAGGGIKGGRAVGKTSKDGTTVEERVTPTVDLLATVCSAVGIDFEKQNMSNVGRPIRIVEKGAQPVTEVLA
>NZ_CP053452.1|WP_171474143.1|7239150_7239501_-|four-helix-bundle-protein
MHGENPLRTRRKQFALRVMKLVDALPNTRAGDVIGRQVLRAATSVGANYRAAKRGRSRAEFCAKLGIVEEACDECSYWLELLCESGMVAAEALDDLMREANEVTAMVVASIRTARD
>NZ_CP053452.1|WP_171474144.1|7239657_7241313_-|DUF1553-domain-containing-protein
MSVRLRVAAFLAALVFPAMSSAAEKAGQAPAPRAVKDPADSLAALIDAYLAKDWEARGLAPAEAADDAEFVRRVYLDLIGRAPKAAEARAFLDDPTPGKRIKLVDALLKVPGHANYFAAVTRSQWLPQAANNFQLIQFGSQFETWLQAQYRANTPADQLVKRILTVKLTVNNQNPMFRFVQGDPSDPESQLITGFYSANEGKAEALGSAVSRLFLGVKLECAQCHDHPFAPYTRDQFWQFAAFFSELNPLAGPRPSFVGPVLPQADRNTIRVAGTDKKVTATFFDGTSPEWAPDRLPRVELADWLVTAKNPYFAKNVANRMWAHFFGIGLQDPVDEPGENNPPSHPELLTALGRAFAENGFDNRTLIRAITRTRAYQLTSRMTHPGQADPRRFARMNLKGLTPAQLFDTLVAATGFREPAAFRNQQNFGFVQPNNPRSQFLSRFVSSDRPTETSTTILQALMLMNGEFIGDQTDLVKSEVLAAVADVPSWDTKQRVGALFLTAFARNPTPDELEKFSSYVDRGGANNNDKKKALADVFWVLLNSPEFLFNH
>NZ_CP053452.1|WP_171474145.1|7241674_7242139_-|TIGR03067-domain-containing-protein
MLAALVALSIGYSADPPNEKEKELPEAAQKQLQKLQGKWKVVKLCAKGMEYQPAEGDRDLIAEFKGRKFSFTGVEKGEVVAIDSLADPKCLDMKCLEKGRTGVVDEGIFKLDGDTLTICFYQGEGKNRPTSFDAPKEPGTVMAVFKRVATEAKK
>NZ_CP053452.1|WP_171474146.1|7242412_7245034_+|tetratricopeptide-repeat-protein
MGLRADPPAVDYPALKQRLQRGNYAEALEGYDRLAKSEKPVAAFLGQAACHRALGASTQALDALDTGLKAAPENPDLLAARADLFYALGKWDEANTDADAALKKQPGHFLARWTRARVLRDRGDLTGADTEMRWFVKAYSDASAAEKEITDSDKLLIVAEAGIENATTHNKPEQIKFVLQDVLRDALKNAPDCWQAEALSGRLLLERHNRADAASAFDAALKINPKAGPALVGKGAVALERMEFGEAERQADVALKVNPKDTAALRLKADVRLAEADHATAEKLLLIAKAVNPREGATLARLAALKHLRGDPAGFAAAVKEVGAFDSKPAPFYTDLGNILTDARQYATAAECFEKAIAFRPALPGAKAGLGLLYFIQGREAEARATLKEAMKADPFNVKADNALTVLEELAEYATVETPHFVIRFDKQNDKILAAFLSGVLEDTFAELAQRYGFTPTNKILVEVFARRQIFSGRIALLPGLPGAVQGACTGPLIALPSPRADGGVRAYNWAIVVRHELTHAFNLLQTSNHVPVWLTEGLAVRSEKTSRFAQMTPLLRDRLAAGTTFDLDTITRAYKRFTQPNDVMLAYYQGLLYVEFIVKRYGGEASVAKLLAAYHTTTDTALALGTAFGVEKVAFEAGYRKYLEETVKAAGGRRPEKVLTFDELRAAHLKNPDDLDLAARYAAALVPRGMVDEAKKLASAIRAKEKGHPLASIVAARLLRRAKDDAGARTVLEEAAEENPDDGRVLIELGKLLYDLKDYDKAATALEWGRKVAPGDADWLDLLAKVYGTSNKPDRLASVLAQQALANPDDLALHLRLAKLYTNAGKHADAERAARAALYIDLLNAEAKDLLLAALAAQKKDQEVEAIRKRYE
>NZ_CP053452.1|WP_171474147.1|7245138_7245435_+|zinc-ribbon-domain-containing-protein
MPLYVYEVVLPDGSGGEQFEVIQRMSADPLTKHPETGEPVRRVFGEPNTPRAWTDMQGKAAVSDKNLAAKGFTKYVKTGDGTYDKTAGTGPKKLKRGK
>NZ_CP053452.1|WP_171474148.1|7245595_7246144_+|peptide-methionine-(R)-S-oxide-reductase-MsrB
MNAYQSVIGVVLVGAVVVTVGLLVARTPTGLPGSPPAIAERVGKPVGGAKVVKTDEEWRAILTPEQYRVTRDRGTERACSGAFWNSKDDGVYHCVCCDQPLFDSQTKFDSGTGWPSFKEAVEADRVTLKSDRGWGMTRTEVMCSRCDAHLGHVFNDGPAPTGLRYCMNSVALKLEPRLPAAK
>NZ_CP053452.1|WP_171474149.1|7246165_7246303_-|hypothetical-protein
MDEKLKWVIAAGLVGFVGAAVWQFLKESANAARRADRHREPWELV
>NZ_CP053452.1|WP_171474150.1|7246593_7247547_+|hypothetical-protein
MSRTSRVPYHQNVYDLLQLEPGESPEAARMIAAHEAQHGPLPASVKEWYLVPQAAPLASRTYETNCFWTRSNPPGSALDLKTVLDRAAHPVVTSSGAMIGIMETYVGEWPAWWMVDLGRDNPMIWRLIDDPDGIEPERSDWNFMAWRLIGDPDGIEPERSDWNFSEFVAEPFFEKFRQLSASCPVELASGEWPDGSNGRNPLFKRFRAHANGLWLRTPDEPFHPPVIDYLTEQFGESERTPRSGHVTTYTFRPPGGTIRITADEPELTGGLSAWWVHTETPERLAEFAALLVPWGTLRDTLRADTEAARGVLQRVRG
>NZ_CP053452.1|WP_171474151.1|7249347_7250301_+|DUF1559-domain-containing-protein
MSQGKRTRGFTLIELLVVIAIIAILIGLLLPAVQKVREAASRMKCQNNLKQLGLAFHNYANTNDNKFPNSYLFVTSPQPNAHAWGVYLLPYIEQGNLFQQYNLNTIFAAGANATVVATPVKTFQCPSAPGDNRVYTCPAPLTAAYGLPSFQAAVSDYHVVSGVMDSLWNVVVGSDGGGGRDGALSANSPTPILAITDGTSNTLLLAEIAGKNDKWVNGQKVSTSSEQGGGWGDPFSGENWLSGSDTTGSVSPGPCVLGCTNSQPLGSTARGLYSFHTGGANALLCDGSVRFVTSGVSAKSILFVVTKAKGEVIPSDF

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Crispr_ID: NZ_CP053452_31

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053452_31

7494200-7494313

Orphan

Consensus_repeat	Method
CCCGGCGGACAGGTGCTCGCGACCGGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP053452_31

>merge|NZ_CP053452|31|7494200-7494313|CRISPRCasFinder
CCCGGCGGACAGGTGCTCGCGACCGGGGCGGTGAAGGCCGTTCCGATCTCGGGCGGCGGGTACGACGCGGAAGTGACGGTCGACGGCCCCGGCGGTCAGGTGCTCGCGACCGGG

>NZ_CP053452|31|30|7494200-7494313|CRISPRCasFinder
CCCGGCGGACAGGTGCTCGCGACCGGG	GCGGTGAAGGCCGTTCCGATCTCGGGCGGCGGGTACGACGCGGAAGTGACGGTCGACGGC
CCCGGCGGTCAGGTGCTCGCGACCGGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053452.1\|WP_171474335.1\|7508769_7509321_-\|transposase	unknown	unknown	gnl\|CDD\|224854
NZ_CP053452.1\|WP_171474331.1\|7500191_7501502_-\|PKD-domain-containing-protein	unknown	unknown	gnl\|CDD\|225828
NZ_CP053452.1\|WP_171474322.1\|7485716_7486697_+\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|133030
NZ_CP053452.1\|WP_171474326.1\|7492324_7493758_+\|DUF1501-domain-containing-protein	unknown	unknown	gnl\|CDD\|369346
NZ_CP053452.1\|WP_171474328.1\|7494710_7494887_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171474317.1\|7480722_7481253_-\|DUF58-domain-containing-protein	unknown	unknown	gnl\|CDD\|376643
NZ_CP053452.1\|WP_171474323.1\|7486686_7488204_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224720
NZ_CP053452.1\|WP_171474329.1\|7495217_7496360_+\|SPFH-domain-containing-protein	unknown	unknown	gnl\|CDD\|372597
NZ_CP053452.1\|WP_171474332.1\|7502414_7503824_-\|type-IV-secretory-system-conjugative-DNA-transfer-family-protein	unknown	unknown	gnl\|CDD\|238546
NZ_CP053452.1\|WP_171474321.1\|7484746_7485724_+\|flippase-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|377103
NZ_CP053452.1\|WP_171474325.1\|7489502_7492199_+\|DUF1553-domain-containing-protein	unknown	unknown	gnl\|CDD\|377872
NZ_CP053452.1\|WP_171474324.1\|7488240_7489392_+\|CPBP-family-intramembrane-metalloprotease	unknown	unknown	gnl\|CDD\|376806
NZ_CP053452.1\|WP_171474320.1\|7482952_7484596_-\|S1-RNA-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|235851
NZ_CP053452.1\|WP_171474334.1\|7505734_7508437_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP053452.1\|WP_171474319.1\|7481866_7482835_-\|MoxR-family-ATPase	unknown	unknown	gnl\|CDD\|223786
NZ_CP053452.1\|WP_171474330.1\|7497963_7499865_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171474337.1\|7513157_7514033_-\|bifunctional-5,10-methylenetetrahydrofolate-dehydrogenase/5,10-methenyltetrahydrofolate-cyclohydrolase	unknown	unknown	gnl\|CDD\|223268
NZ_CP053452.1\|WP_171474336.1\|7509569_7513019_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171474333.1\|7504013_7504451_-\|cytochrome-c	unknown	unknown	gnl\|CDD\|376525
NZ_CP053452.1\|WP_171474318.1\|7481418_7481736_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP053452.1\|WP_171474335.1\|7508769_7509321_-\|transposase	gnl\|CDD\|224854	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	6.70351e-28
NZ_CP053452.1\|WP_171474331.1\|7500191_7501502_-\|PKD-domain-containing-protein	gnl\|CDD\|225828	COG3291, COG3291, FOG: PKD repeat [General function prediction only].	8.58497e-08
NZ_CP053452.1\|WP_171474322.1\|7485716_7486697_+\|glycosyltransferase-family-2-protein	gnl\|CDD\|133030	cd04187, DPM1_like_bac, Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.	1.26133e-82
NZ_CP053452.1\|WP_171474326.1\|7492324_7493758_+\|DUF1501-domain-containing-protein	gnl\|CDD\|369346	pfam07394, DUF1501, Protein of unknown function (DUF1501). This family contains a number of hypothetical bacterial proteins of unknown function approximately 400 residues long.	7.93656e-167
NZ_CP053452.1\|WP_171474317.1\|7480722_7481253_-\|DUF58-domain-containing-protein	gnl\|CDD\|376643	pfam01882, DUF58, Protein of unknown function DUF58. This family of prokaryotic proteins have no known function. Caldicellulosiruptor saccharolyticus PepX, a protein of unknown function in the family, has been misannotated as alpha-dextrin 6-glucanohydrolase.	1.75087e-15
NZ_CP053452.1\|WP_171474323.1\|7486686_7488204_+\|hypothetical-protein	gnl\|CDD\|224720	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane].	0.00811812
NZ_CP053452.1\|WP_171474329.1\|7495217_7496360_+\|SPFH-domain-containing-protein	gnl\|CDD\|372597	pfam13421, Band_7_1, SPFH domain-Band 7 family.	1.19103e-116
NZ_CP053452.1\|WP_171474321.1\|7484746_7485724_+\|flippase-like-domain-containing-protein	gnl\|CDD\|377103	pfam03706, LPG_synthase_TM, Lysylphosphatidylglycerol synthase TM region. LPG_synthase_TM is the N-terminal region of this family of bacterial phosphatidylglycerol lysyltransferases. The function of the family is to add lysyl groups to membrane lipids, and this region is the transmembrane domain of 7xTMs. In order to counteract attack by membrane-damaging external cationic antimicrobial molecules - from host immune systems, bacteriocins, defencins, etc - bacteria modify their anionic membrane phosphatidylglycerol with positively-charged L-lysine; this results in repulsion of the foreign cationic peptides.	1.81525e-08
NZ_CP053452.1\|WP_171474325.1\|7489502_7492199_+\|DUF1553-domain-containing-protein	gnl\|CDD\|377872	pfam07583, PSCyt2, Protein of unknown function (DUF1549). A family of paralogues in the planctomyces.	1.53489e-106
NZ_CP053452.1\|WP_171474324.1\|7488240_7489392_+\|CPBP-family-intramembrane-metalloprotease	gnl\|CDD\|376806	pfam02517, Abi, CAAX protease self-immunity. Members of this family are probably proteases (after a isoprenyl group is attached to the Cys residue in the C-terminal CAAX motif of a protein to attach it to the membrane, the AAX tripeptide being removed by one of the CAAX prenyl proteases). The family contains the CAAX prenyl protease. The proteins contain a highly conserved Glu-Glu motif at the amino end of the alignment. The alignment also contains two histidine residues that may be involved in zinc binding. While they are involved in membrane anchoring of proteins in eukaryotes, little is known about their function in prokaryotes. In some known bacteriocin loci, Abi genes have been found downstream of bacteriocin structural genes where they are probably involved in self-immunity. Investigation of the bacteriocin-like loci in the Gram positive bacteria locus from Lactobacillus sakei 23K confirmed that the bacteriocin-like genes (sak23Kalphabeta) exhibited antimicrobial activity when expressed in a heterologous host and that the associated Abi gene (sak23Ki) conferred immunity against the cognate bacteriocin. Interestingly, the immunity genes from three similar systems conferred a high degree of cross-immunity against each other's bacteriocins, suggesting the recognition of a common receptor. Site-directed mutagenesis demonstrated that the conserved motifs constituting the putative proteolytic active site of the Abi proteins are essential for the immunity function of Sak23Ki - thus a new concept in self-immunity.	1.55303e-16
NZ_CP053452.1\|WP_171474320.1\|7482952_7484596_-\|S1-RNA-binding-domain-containing-protein	gnl\|CDD\|235851	PRK06676, rpsA, 30S ribosomal protein S1; Reviewed.	2.39674e-102
NZ_CP053452.1\|WP_171474334.1\|7505734_7508437_+\|hypothetical-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	0.00155694
NZ_CP053452.1\|WP_171474319.1\|7481866_7482835_-\|MoxR-family-ATPase	gnl\|CDD\|223786	COG0714, COG0714, MoxR-like ATPases [General function prediction only].	2.79464e-93
NZ_CP053452.1\|WP_171474337.1\|7513157_7514033_-\|bifunctional-5,10-methylenetetrahydrofolate-dehydrogenase/5,10-methenyltetrahydrofolate-cyclohydrolase	gnl\|CDD\|223268	COG0190, FolD, 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism].	4.62207e-139
NZ_CP053452.1\|WP_171474333.1\|7504013_7504451_-\|cytochrome-c	gnl\|CDD\|376525	pfam01322, Cytochrom_C_2, Cytochrome C'.	0.00112011
NZ_CP053452.1\|WP_171474332.1\|7502414_7503824_-\|type-IV-secretory-system-conjugative-DNA-transfer-family-protein	gnl\|CDD\|238546	cd01126, TraG_VirD4, The TraG/TraD/VirD4 family are bacterial conjugation proteins involved in type IV secretion. These proteins aid the transfer of DNA from the plasmid into the host bacterial chromosome. They contain an ATP binding domain. VirD4 is involved in DNA transfer to plant cells and is required for virulence.	2.33217e-54

>NZ_CP053452.1|WP_171474326.1|7492324_7493758_+|DUF1501-domain-containing-protein
MLPLPLSRREVLARCGVGMGLLGLTQLMGDAGLLLPHAAAADDLNPLAPKKSHFPAKAKRVIHIFANGGPSQVDTFDPKPALNKYAGKSLPTTNLRTERRTGAAFPSPFKFQKYGKSGLEVSELFARTAAHADDICVIRSMHADVPNHEPSFLLMNCGEPRQIRPSVGSWVTYGLGTENQNLPGFVAMCPNGYPLQESQNWQSGFLPGVFQGTYVDSKHTDVEKLVEFVKNKATSKADQRKQLDLLAKLNKAHEAARPNDPQLEARIQSFELAARMQTEASEAFDVTREPKHVLDAYGPGEQARSLLLARRLIERGVRFVQVSHAPVQPWDSHDDLEKEHRRLAGEVDRAIAALIADLKRLGLFDSTLIVWGGEFGRTPVVELPTPGSNAGKVNGRDHNHWGFSVWLAGGGVKGGQAVGATDEFGFKAVENPVHVHDLHATMLHLLGFDHEKFTFRYAGRDFRLTDVSGRVVKEVLA
>NZ_CP053452.1|WP_171474325.1|7489502_7492199_+|DUF1553-domain-containing-protein
MQWFLALCATCIPVFAIAADPAPKPTAAQLEYFETKVRPVLADHCYSCHGPKKQSAGLRLDTVAGLRAGADNGPVLVPGAPAKSRLVQSVKREGDYAMPPKTPLPAEAVAAISEWVKAGAALPDDIATSPIPESKRHWAFQPVRAPAVPQSGAPAPTPIDAFVAAKLKEQGLAPAPRADRRTLIRRAYLDLTGLPPTAEEAEAFAKDESPGAWAKLIDTLLASPRYGERWGRYWLDVARYADTKGYTFGEDRNFAFSYTYRDYVIRSFNEDKPYDRFVTEQIAADLLPLGEDKRPLAALGFLTLGRRFLNSQPDIIDDRIDVVTRGLMGLTVACARCHDHKYDPVPTKDYYSLYGVFASSSEPAELPLIGAVKRTPEVIAFEAELEKHEAEYRAARAKHHADALKKFGEPAGVAEYLRAVLDAHGKPNGEVQALVRQRDLTQFVFDRWRGFLEAEWKAKSPVYSPLLALKTVPETEFESKAPGALGAEANPVVVGALKTAKPKSLKAAVEAFAHAIVSEPQPPAADKVRAAVVAWRGAGGPLDIPLADAEKVFNRADRDALTAVRTKIDAFKATHPHAPPRAHALHDNPQPMQPVVFLRGNPNNHGPVVPRQAPEVIAGASRKPFTQGSGRLELARAITSSENPLTARVMVNRVWAGHFGSGLVRTPSDFGTRSDPPTHPELLDWLATTFVKDGWSVKRLHKQIMLSATYQQSSAVTAEQFKRDPENRLLAHQNRRRLDFEALRDSLVAASGRLDLTTGGRPVDLFHAPFPTRRTVYGLIDRTNLPGTFRVFDFANPDTHSPQRFQTTVPQQALFLLNSPFVQEQAKALAARKPVAEAKTVPAKVTALYRLALGRNPATEEAALAAEFVAHDDPKAAFGHWPQLAQVLLLSNEFAFAD
>NZ_CP053452.1|WP_171474324.1|7488240_7489392_+|CPBP-family-intramembrane-metalloprotease
MSEPANDPPMVTRPPEVAPPVPKRPRPGFWEALVWCLLFLAGQVFGAVAGMGVVFIAYALAEPEPVRFMLDQLEGFSKASDAKAQDDRPPVPFEIGRAVAWGMLSAQFVSLGMIALVLPRRIGPDWKRQLGVRRPSGLHVLLVLMIVPGFVLFADVIQTVFVWATDLKPPATMRALNGIFRQFPWPLTVLAVALGPGVVEEFWFRGFLGRGLSARYGLGAGVLLTSLFFAVAHLDPSQLLTFALMGAYLHFVYRATRSIWPSILLHAMNNGIAVLLLLVLPPEKLEQPTPVIVPLASLSLLIFGSVALWTNRARVERIAADDPTRWDGWESDEGTWKAEYPGISTPAPESGLRLGYGAVSPVALGFTFASFSVLLYLCYRYVI
>NZ_CP053452.1|WP_171474323.1|7486686_7488204_+|hypothetical-protein
MAADPSDMRRSVYLLLIAVAVAIAAAKTVGGENVLEPSRYAAPVTQDGIKGYGSETDRKWPETRPDPVPMFSSNDKSRWATVRALVHDKTYVIGKRTYADPQNPKAYRDEGIVVDPAYRSTDVVLNPETNEFYSSKPPLMATMVAGEYWALRKMFGWNIVHDRWLVIPVIVLTWNVVPFALYLVLIGRLLDGIGKTDFGKLLAFTTAAVGTFLTTFSGTLNNHTPAAFCVLFASYPLLKAILENRDLGPGEYALCGFFAALAATFELPALSFVAAVGVPLLVARTRPAVCYFLPAAVVPIAALYLCNYVALGTLEPVYDKFGGPWYRFEGSHWSKIGTPAAKGLDFNDEPTSVYAFHLSFGHHGWFSLTPVWLVALVGLVVLGIKSAPAVRKLLGSVKGTGWTLEMFAAATLVVSLAVFGFYLTRTQSYNYGGNTSGPRWLFWLIPLWVLAIPTAADWLARSAGGRLLGAGLLGASAFSVFYPAWNPWRSPWLMQLMEYTGWLRY
>NZ_CP053452.1|WP_171474322.1|7485716_7486697_+|glycosyltransferase-family-2-protein
MPESAAEPQLLSLVIPVYNERESLAALHAEIAEVATKLRERVELIFVDDGSSDDSWGVIREIASKDDRVRGIKFRRNFGKAAALAAGFGAARGGVVITMDADLQDDPHEIPHFLEKLRGGLDVVSGWKQIRHDPWHKVLPSRVFNRFLSVLTGVYLHDHNCGMKAYRAEALREVHLYGEMHRFVPVLAYSRGFKVGELVIQHRARKFGRSKYGWKRFIKGGLDVVTVRLLTGFGRRPQHFIGAWGLGFTAAALFGFFLLAVNALVRQWEADLGAGPVAQVVGLVLSVGLGLLGTQCLLTGLLAEMTVARKWLDNEPYSVAERTDGC
>NZ_CP053452.1|WP_171474321.1|7484746_7485724_+|flippase-like-domain-containing-protein
MLAVRTALAVGIMVAVGAHFSRTLNKIDAGQLPVRLQPELLVASGLLYLLAHLCWSTFWVRLLHNQGVHVSWWVGLRAYYLSQFGKYVPGKVAVLGIRVVMLRHYGGHPLPVAVTATYETLSSMSAGAMLGVLFLPALGGALGDKISGGTMAFVVIASLPLGLVVLNKLAAWVVNRRRRPGAPPLATPSIGLLAQGLLHGACGYALLALGLSLTVRALIPDARIWTLATYTADIATVGLSYVAGFVAVIAPGGLGARELSMQLALTPQFAPAHGEQAAGLATVVALTLRLTWTIAEVVIGLPLYLLRPALPPHAHHETRNENPHA
>NZ_CP053452.1|WP_171474320.1|7482952_7484596_-|S1-RNA-binding-domain-containing-protein
MSTENTSPAPEQPTPPAAPTPPAANPGATPPVYGAQPVRALTPGGAAPPRPRPPPAPKPGAAPPVYGAPAVSALKPGGASPAPAGKGPPRPGAPRPGGPNRGGPHGDRPQRSDKPMNPGGAPPQLFFGGPKPNNRELDKLIEDELAAAMGDFDVTKTVAQVETVQKPRAAGTVGGGKKTGVVVGVHGNDVFVEVPGGRSQGVLPLQQFEGRKPVVGEPVEFDIDHYDAADGLLILTREGSTQVVHDWSQVTYGMIVEARVTGTNKNKTGLTVEVNGIKGFLPASQLDLYRVENIEQFVNQRIKVMVAEVNPEERNLIVSRRAVQEKEKQAKAEEFWKNIQEGQVLKGIVRSIKPFGAFVDLGGADGLIPASEFSWQRVADLNEFVKIGQQVEVKVNRIDFEARKIGLSMKQLTVSPFDEYTKTVHAGARVTGKVSRTAEFGAFVELTPGVEGLIHISELSTQRVRRVRDVLEEGQTVVVEVLSTDPTTRRIALSLKKIATEAEAAADAAEEAEREADLRTAEETMASRPVNPNLRGGVGGPIRFDVE
>NZ_CP053452.1|WP_171474319.1|7481866_7482835_-|MoxR-family-ATPase
MAVDGSIPARSPRDLAPLLAALQANVGRVFLGKPDVIRMAAVALLADGHLLLDDVPGVGKTLLAKALARSLACKFNRIQFTPDLLPADLIGVTIYKAQTGEFTFHPGPVFAEIVLADEINRATPRTQSALLEAMQERQVTVDGTTRPLGPPFLVVATQNPHEFEGTYPLPESQLDRFLLRVKVGYPGREAERAILTQHRAGEPVEKLEPVLQPADVIALQQHVRTVRVDPAIAEYVLDLIGETRKHAELALGASTRAALALYRAVQAYAVTAGRDYAVPDDVKALAEPVLAHRLVTRSWAAGGHPDAGPIVRDVLSKLKVPA
>NZ_CP053452.1|WP_171474318.1|7481418_7481736_+|hypothetical-protein
MNPNGKPDVRVTGPAYRPRAGNVRHAVHGSAWPAGSRYTRKEFAPGPARSSAVRVIGYLAPLVTVRPHSTRSPAKTGGSAIRRAVARRTANHARSPFRTSRQAIA
>NZ_CP053452.1|WP_171474317.1|7480722_7481253_-|DUF58-domain-containing-protein
MRPYRPGDAIRDIHWRTTARGEPMVREYDTAPSPELVLVVEAWLPAAPDATDRARLEAALSLAATIAVTWRGRAFDSAVTVVVPGSDAVAATAASEEDLRAALAPLASVRGTDAVEAPAARTFTRHLARGARLVVSSRAHTPFAAALGHSTGKPFIAVCPDDRPPWYLPPAAPGSR
>NZ_CP053452.1|WP_171474328.1|7494710_7494887_-|hypothetical-protein
MAPHLRTPGRIPIGSGRAPTELPWRWRGPSPLATLGPDRLAALAGVRCAGELAFPPAD
>NZ_CP053452.1|WP_171474329.1|7495217_7496360_+|SPFH-domain-containing-protein
MGLMDWAKGQFIDIIEWTEPSQNEILAHRFPRHNNEIKNGAKLIVREGQAAGFVKEGQLADVKTPGMYTLDTQNMPILSTILGWKYGFESPFKCEVYFIATRQWTDQKWGTLNPVMYRDPEFGPVRLRAFGNYAFKVTDPGTFLKELVATDPSFELYEISAQFRNVIVSRFIDALGASHIPMLDLAGNYDRVSRAAAEKIAPELAKMGVSLTQFFVENISLPPEVEAALDKRSQMSVLGNLDQYAKMQAADAIRDAAQNPGGVAGLGAGLGAGVAVGQQMGAAVAAAAAAPGVVTPANTTPPAGAASGPPPLPTAVAYHAAIDGAAAGPFDMTALAGHVRAGKLTRSSLVWKSGMAAWAAAETVPELQPLFASVPPPLPG
>NZ_CP053452.1|WP_171474330.1|7497963_7499865_-|hypothetical-protein
MSTAWCLSVAFCTPWVVGAPLAWLLWGRRRALRPADWLWAPFLGLAGVAVVLQNLTVYADLTLRQSTPWFVGSVALGWLVMLAAQTGRASLRALPVRVLGLALLVYLSQGIGVLVQGVEQYRGNLQSDQYQYVLTGQFLIDEPFQTEVNDIGPRPWVLQAYALKSDRLGQSVIHGFVAVVAGRDALDLFFPVELMGAALLCPATFLLCPQFGLPRRLWPAVAVAVGIAPGIEFLISSCFLSHVLCMPALVANLAGAARLARGGSTRPLVGTAAALALGFAVYTEFAPLFFGTTAAALTAGIVCGSLRPRRAALVAAALTIAVCMNPAALDAAVNVWLRGASTGPAMTLPFPLGVWASCLWVNYHAAAARVFGAKFTSVRALVLCCTVAAALGIVSAGVRGLRSSRRLRPAVAAACSLFVPPLVLTAMRPDSVYMQSKLVWTLGPFLVVFIACCIRELAFGVRSVRTRQVPVAGLWLVAAIFGFQIVTDQQDHLLHNRRRGELARVWNDAGLRDLCAELRARPSCDLVIALDTAEPNAWVEASALCYHGRRHRVRMASPQQIWLTPLQHLPLPQLIDVTAVPAGALVIRSGGLAIPDAAGEVVSRHGKYEVVRVTQPGTYWGERLLASRGARTE
>NZ_CP053452.1|WP_171474331.1|7500191_7501502_-|PKD-domain-containing-protein
MAESEQTPTAAPSPAAAKHGWLKAAVDGVLGLGGGAVGTYVTAVVDRVVKPTKPVANFATTPDGLTVACQNHASGESGWWDFGDGSPLEPFTPDQHVTHGYAKPGTYHVKLTVRNYLGDENERAVPVEVAYGVKDAPPPQIVAFALSPVSPAAVAPATFRLTADVSNAGACVWDFGDGRVEVSDGGKIDRLVTFEKPGTFAVSLVAHNGKLGAKQSTPVKVEAPRDGTTMAVLKVIDSGTRVDHTATTESVAVPVPSDKTTTFHKTIHARPNHTFTAATIAEVPSSVKNVTVKIAEDKQSAVVSGEWAGDRKATNKAAGGSDAILRIKLGHERVAPHPLTVTMVTGTFGASGPVLKAELPLPPAPMNLAGAKREYRLEIRSNREGKSHTVLQAPADGKGSVDLPWMAKQKEQDRLTTYSAKQEGDTVVFTAVESNP
>NZ_CP053452.1|WP_171474332.1|7502414_7503824_-|type-IV-secretory-system-conjugative-DNA-transfer-family-protein
MPTTQEQPMFDPAESNADSSRTAGRRSRKKPGPRRTISKILPDDGSALFLGWDGTDHKPSIGFKPTVSGVSTRAALTYDGDGHLLTIAPTGAGKGVGAIIPALLTYPGTIIVTDIKGENYQVTARHRREMGQQVVVLDPFGLVTAKDKGDKLNPFDLFGVPGSDPESDAEMLAAQLAVGHEFSTDRYWEDTGRGLVSGLVADVATSSPPEKRNLCTLRELLYNDDLDYTLAVALDTRKKTMSPLARDEFVAYLAAPSDKTRPCIRTTATTFVKCLGSTCVSRSLERSTFALNDLLDNKPMTIYLVLPPEKLHSHRSLLRLWVVTLLTVVMRRTRLPKQRTLFLLDEAAQLGSLDLLPQAVSLLRGYGLQLWTFWQDLSQMMRLYPNNWESLVNNAAVLQAFGVPGHASRNSWRVILGEDAQLASELHSEEMLVAVTGRPTTRHTRANYLKDKAFAGRFDANQRFLGLEK
>NZ_CP053452.1|WP_171474333.1|7504013_7504451_-|cytochrome-c
MLRKLLKVTLAGSIGMLALVLAQTETVKADDKDKKADKKLTTKQIMGIGHKGADALFGKVQTAVKAKKWEDAVEPAKELAANGSLFPKATPPKGDAKSWEDLAGKYADNTKALSDAVEKKDADAAAKAGKAIGSSCGACHKAHKP
>NZ_CP053452.1|WP_171474334.1|7505734_7508437_+|hypothetical-protein
MTPWHRNEYMLKGLFLGLWVFFALQVPANPADAWKDILWVLGWVGTGLVAGFGLGTVKLASRGMKPWDNWRAFPFLVLLESPLFIYAGIMLGLGFGVLSGSPLLQPWSEPVARAFGLTWDDIKHAPPVGDWLLHCIVGGALLGLCLYRMRQMEDGQTRFFLGLGVAALMVYLASEYLLKIKVDVFVPDPTDPGRMIPKLVPDPADPGKLMTERVPFFDNPATRFNLGIYILCGLPFFYLLTLSGEAEESEVEIMTLCAALGVALYLIGFGTGLGGAAPFLIPVVLYFVYATRVLPGLRVFKHVLRGFSYMNVGRLALALRFFRRALQLNPEGQLANEGMLALHNSLTLSKLERDPELMASLDFGLCLDRAAALLMIPPTPVAREEAEKFLALVEQKKPAYQAKVDYLRTVSFVHARQYESAAEALARLLSPETPGYHTGLRRQIYFDALYLALDGPKGLTDRLGWAEMNKPGRRMEAIAAVERKLAADPAHEKAKEYRTMLYSQLSEGEFVSAAATGEPREFNYEYVEQLGYQLVDENDPDRRDRGLGYLRIAARGLPEHGPGIFKKLADVSEKLGDPKTARGYTEQIRRVGKQVNPRNLAKDQREIYFVALRKLAALLEQDGDAVKAEADAADARGDAAGRGAKDAEARPFYESAIEHYREYLDGGGGSALEAYRKIAELYGKMRDGLNAVLNTEAALAYSGTDPDLARKRDSYYYSVSVERLTAAKENVGKWFDVGYCVKKAMSVLNSRDADADLLDWATHLTRLAKVVEPASNRVRLVEARCLLRRGERDAGLSLLEDVREGAKGSGDEEEAWYNTTRILGQLYLEELNRPDLALKAYTDYKDYHKSGADTLFQIARCYEATNDLGNAVKFYNAVTAYEEHPKYWDAKDALKRLGKG
>NZ_CP053452.1|WP_171474335.1|7508769_7509321_-|transposase
MPNFKRFRVPGAMYFFTVVTHDRCPILTTDLGRRSLRESFDSELARLPFDLFAVVLLPDHLHAVWKLPPGDTDYSTRWGKIKEGFTRRFLAGGGFEGTRTVNRDRHRERAVWQQRFWEHTIRDEDDLERCVSYIHWNPVKHRLVARVKDYPWSSFQRFVHAGDYDPDWGGELECPDVSGAEWE
>NZ_CP053452.1|WP_171474336.1|7509569_7513019_-|hypothetical-protein
MKLEELSRILRETDPAAVLVNRSVLDRVIQNVTGTAWVVWEVPHAHCFVVDRPVLYKYVEPEELNLPHDYNLPRAVLLLERPTAEQLNGPVTELLAQYWRLLFHAAAHRELDNRLTGVSPVGLRERIDAIGAAAFEEARNVLIQDGLLTDRADEGVAYVEFAAYFLELRYFNPALIPVCFPSLPPDSVVETVLNRDVDGEALFKKTRPAGAKDPAPKTDDQSDESHDFYKRLERAAKRATAAGDTVSAAILHTRAARVAPGYLTGPAQALAREEIGRLVDRLQAALRLDDADVVVWKRTLPALLDKADQGNRPVEAALLYDIQRACLDHEQKIYTLDVFEWLGSAGHKPIKRELTGQRFVRVPAQLRSASRRLAAARLTDADRQTLALLLRNALDQAERQLRDKFAPLLDNALHDAGLHPTSLPERAAIEKTVEELLDRISSAGFLSFGDVRDAIARGQMKLPDLSAHTESVRGDPLLRLDRRLASQLDGVYRRAESYTRGLERVTAFNFGTQTGRWLTRNVSLPFGAAFLVAQFIWLLAFERMGKVARTRGEVGPSFFGGWNVELWFHAAWVGLGLFVLAVIRSAPLRAGLIGTGRLVYRATRFVVWEIPAQIWGNRWVRAVLGSVPAQLLLNYVIRPLCLCGVLWLLPIGLWEAGWLARTVTFLGTAFLVNTRFGWRIEAVLFETARRLLELVPSVPAILRWLNDVFREMVDALEWVLARVEDWLRLRGRTGPVAIAVRAVAGLIWMPFAFLIRFYTVVLIEPMLNPLKLPLSILFAKFIYPLLLLFPGLLLADPTSFLGYSSPLVEQLAPYLTEPGAGLLVMGTLWLLPDACTFLFWEMRENWHLYRANRPDALRPVSVGDHGETIRGLLRWGFHSGTVPRLYAKLRQAEREAARTDVWRDARTHRAALRAVEEAVCRFVTRDFIEVLNDRESGWSGPRLAAGRVLLGTNRIRLELVAEGAAPAWLEWDDRSGWLVAGWAEPGFLTTLSDDQARVFGNALAYLYKRAGANLVREQIRAELSKEAQHFDLCRDGLLVWYGTRDSAPVLYDIADPAPQIRPRVPGQRKPTTGPVLDAARLMFDRTQITWTQWTEVWRAPAPGDKPPRLGPANSELVLLPPRTDRPPSASDPPAVLGSARADDAPAGAL
>NZ_CP053452.1|WP_171474337.1|7513157_7514033_-|bifunctional-5,10-methylenetetrahydrofolate-dehydrogenase/5,10-methenyltetrahydrofolate-cyclohydrolase
MPAQRLDGKALAATMRAEIAARVAARTAKGQRPPGLAAVLVGEDPASQTYVRNKHKACHDAGLASAVHTLPASTTQAGLLELVARLNADPAVHGILVQLPLPKQIDEGAVIRAVAPAKDVDCFHPENVGLLAAGFPRFYPCTPHGVLQLLSRNGIGTAGKEVVVVGRSNIVGKPLALMLMQKPTAASPAAGDATVTVAHTRTADLAAVCRRADVLVAAVGRAGVITPDMVKPGAAVVDVGTNSVNGKLVGDVHPDVGAVAGWLSPVPGGVGPMTITMLLYNTLSAAEQIDG

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Crispr_ID: NZ_CP053452_32

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053452_32

7736654-7736751

Orphan

Consensus_repeat	Method
ACTCGGGGGGCTTACGCCCCCCGCTCGCCTGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP053452_32

>merge|NZ_CP053452|32|7736654-7736751|CRISPRCasFinder
ACTCGGGGGGCTTACGCCCCCCGCTCGCCTGCCGTCAACGCCGTCAACTCTGCCCACGTCGAGTAGACTCGGGGGGCTTACGCCCCCCGCTCGCCTGC

>NZ_CP053452|32|31|7736654-7736751|CRISPRCasFinder
ACTCGGGGGGCTTACGCCCCCCGCTCGCCTGC	CGTCAACGCCGTCAACTCTGCCCACGTCGAGTAG
ACTCGGGGGGCTTACGCCCCCCGCTCGCCTGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053452.1\|WP_171474486.1\|7740862_7741210_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378398
NZ_CP053452.1\|WP_171474493.1\|7757492_7758527_+\|DUF3500-domain-containing-protein	unknown	unknown	gnl\|CDD\|378789
NZ_CP053452.1\|WP_171474487.1\|7741206_7748058_-\|HEAT-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|237512
NZ_CP053452.1\|WP_171474488.1\|7748059_7751341_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|349379
NZ_CP053452.1\|WP_171474489.1\|7751917_7752895_-\|SMP-30/gluconolactonase/LRE-family-protein	unknown	unknown	gnl\|CDD\|369882
NZ_CP053452.1\|WP_171474476.1\|7727245_7729207_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372253
NZ_CP053452.1\|WP_171474492.1\|7756857_7757265_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237865
NZ_CP053452.1\|WP_171474478.1\|7730335_7731343_-\|phosphoglycerate-dehydrogenase	unknown	unknown	gnl\|CDD\|240649
NZ_CP053452.1\|WP_171474491.1\|7754167_7756687_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|273828
NZ_CP053452.1\|WP_171474479.1\|7731781_7732201_+\|ribosome-silencing-factor	unknown	unknown	gnl\|CDD\|376779
NZ_CP053452.1\|WP_171474490.1\|7752984_7753776_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|235975
NZ_CP053452.1\|WP_171474481.1\|7734370_7735492_+\|GTPase-ObgE	unknown	unknown	gnl\|CDD\|237046
NZ_CP053452.1\|WP_171474475.1\|7726391_7727237_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171474485.1\|7738992_7740858_-\|SWIM-zinc-finger-family-protein	unknown	unknown	gnl\|CDD\|309540
NZ_CP053452.1\|WP_171474477.1\|7729295_7730243_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP053452.1\|WP_171474474.1\|7725779_7726133_+\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|368559
NZ_CP053452.1\|WP_171474480.1\|7732335_7734273_+\|arginine--tRNA-ligase	unknown	unknown	gnl\|CDD\|223097
NZ_CP053452.1\|WP_171474484.1\|7737541_7738864_-\|RNA-directed-DNA-polymerase	RT	pfam00078_RT_CAS-I:CAS-III	gnl\|CDD\|239569
NZ_CP053452.1\|WP_171474482.1\|7735488_7736256_+\|type-III-pantothenate-kinase	unknown	unknown	gnl\|CDD\|367441
NZ_CP053452.1\|WP_171474473.1\|7722881_7725719_+\|DUF1553-domain-containing-protein	unknown	unknown	gnl\|CDD\|377872

Protein	Function_ID	Function_description	E-value
NZ_CP053452.1\|WP_171474486.1\|7740862_7741210_-\|hypothetical-protein	gnl\|CDD\|378398	pfam10112, Halogen_Hydrol, 5-bromo-4-chloroindolyl phosphate hydrolysis protein. Members of this family of prokaryotic proteins mediate the hydrolysis of 5-bromo-4-chloroindolyl phosphate bonds.	0.00021587
NZ_CP053452.1\|WP_171474493.1\|7757492_7758527_+\|DUF3500-domain-containing-protein	gnl\|CDD\|378789	pfam12006, DUF3500, Protein of unknown function (DUF3500). This family of proteins is functionally uncharacterized. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 335 to 438 amino acids in length. This protein has a conserved GHH sequence motif. This protein has two completely conserved G residues that may be functionally important.	1.28943e-12
NZ_CP053452.1\|WP_171474487.1\|7741206_7748058_-\|HEAT-repeat-domain-containing-protein	gnl\|CDD\|237512	PRK13800, PRK13800, fumarate reductase/succinate dehydrogenase flavoprotein subunit.	5.21459e-13
NZ_CP053452.1\|WP_171474488.1\|7748059_7751341_-\|hypothetical-protein	gnl\|CDD\|349379	cd17748, BRCT_DNA_ligase_like, BRCT domain of bacterial NAD-dependent DNA ligase (LigA) and similar proteins. LigA, also called NAD(+)-dependent polydeoxyribonucleotide synthase, catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. The Trp-X-X-X-Cys/Ser signature motif of the BRCT family is not conserved in this family.	6.5743e-19
NZ_CP053452.1\|WP_171474489.1\|7751917_7752895_-\|SMP-30/gluconolactonase/LRE-family-protein	gnl\|CDD\|369882	pfam08450, SGL, SMP-30/Gluconolaconase/LRE-like region. This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30), gluconolactonase and luciferin-regenerating enzyme (LRE). SMP-30 is known to hydrolyze diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 and LRE.	1.2004e-26
NZ_CP053452.1\|WP_171474476.1\|7727245_7729207_-\|hypothetical-protein	gnl\|CDD\|372253	pfam12679, ABC2_membrane_2, ABC-2 family transporter protein. This family is related to the ABC-2 membrane transporter family.	3.24234e-06
NZ_CP053452.1\|WP_171474478.1\|7730335_7731343_-\|phosphoglycerate-dehydrogenase	gnl\|CDD\|240649	cd12172, PGDH_like_2, Putative D-3-Phosphoglycerate Dehydrogenases, NAD-binding and catalytic domains. Phosphoglycerate dehydrogenases (PGDHs) catalyze the initial step in the biosynthesis of L-serine from D-3-phosphoglycerate. PGDHs come in 3 distinct structural forms, with this first group being related to 2-hydroxy acid dehydrogenases, sharing structural similarity to formate and glycerate dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily, which also include groups such as L-alanine dehydrogenase and S-adenosylhomocysteine hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. Many, not all, members of this family are dimeric.	9.82617e-128
NZ_CP053452.1\|WP_171474491.1\|7754167_7756687_-\|hypothetical-protein	gnl\|CDD\|273828	TIGR01840, poly3-hydroxybutyrate_depolymerase_A_precursor, esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi. [Fatty acid and phospholipid metabolism, Degradation].	3.37191e-06
NZ_CP053452.1\|WP_171474479.1\|7731781_7732201_+\|ribosome-silencing-factor	gnl\|CDD\|376779	pfam02410, RsfS, Ribosomal silencing factor during starvation. This family is expressed by almost all bacterial and eukaryotic genomes but not by archaea. Its function is to down-regulate protein synthesis under conditions of nutrient shortage, and it does this by binding to protein L14 of the large ribosomal subunit, thus acting as a ribosomal silencing factor (RsfS) by blocking the joining of the ribosomal subunits. This family is structurally homologous to nucleotidyltransferases.	1.25141e-41
NZ_CP053452.1\|WP_171474490.1\|7752984_7753776_+\|SDR-family-oxidoreductase	gnl\|CDD\|235975	PRK07231, FabG-like, SDR family oxidoreductase.	2.73494e-61
NZ_CP053452.1\|WP_171474481.1\|7734370_7735492_+\|GTPase-ObgE	gnl\|CDD\|237046	PRK12297, obgE, GTPase CgtA; Reviewed.	2.53803e-177
NZ_CP053452.1\|WP_171474492.1\|7756857_7757265_+\|hypothetical-protein	gnl\|CDD\|237865	PRK14951, PRK14951, DNA polymerase III subunits gamma and tau; Provisional.	0.00571468
NZ_CP053452.1\|WP_171474485.1\|7738992_7740858_-\|SWIM-zinc-finger-family-protein	gnl\|CDD\|309540	pfam04434, SWIM, SWIM zinc finger. This domain is found in bacterial, archaeal and eukaryotic proteins. It is predicted to be organized into two N-terminal beta-strands and a C-terminal alpha helix, thus possibly adopting a fold similar to that of the C2H2 zinc finger (pfam00096). SWIM is thought to be a versatile domain that can interact with DNA or proteins in different contexts.	0.000346133
NZ_CP053452.1\|WP_171474477.1\|7729295_7730243_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	1.54424e-77
NZ_CP053452.1\|WP_171474474.1\|7725779_7726133_+\|Uma2-family-endonuclease	gnl\|CDD\|368559	pfam05685, Uma2, Putative restriction endonuclease. This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. A small number of member proteins also contain pfam02861 domains that are involved in protein interactions. Solutions of several structures for members of this family show that it is likely to be acting as an endonuclease.	1.23198e-12
NZ_CP053452.1\|WP_171474480.1\|7732335_7734273_+\|arginine--tRNA-ligase	gnl\|CDD\|223097	COG0018, ArgS, Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis].	1.95667e-173
NZ_CP053452.1\|WP_171474484.1\|7737541_7738864_-\|RNA-directed-DNA-polymerase	gnl\|CDD\|239569	cd03487, RT_Bac_retron_II, RT_Bac_retron_II: Reverse transcriptases (RTs) in bacterial retrotransposons or retrons. The polymerase reaction of this enzyme leads to the production of a unique RNA-DNA complex called msDNA (multicopy single-stranded (ss)DNA) in which a small ssDNA branches out from a small ssRNA molecule via a 2'-5'phosphodiester linkage. Bacterial retron RTs produce cDNA corresponding to only a small portion of the retron genome.	3.8861e-89
NZ_CP053452.1\|WP_171474482.1\|7735488_7736256_+\|type-III-pantothenate-kinase	gnl\|CDD\|367441	pfam03309, Pan_kinase, Type III pantothenate kinase. Type III pantothenate kinase catalyzes the phosphorylation of pantothenate (Pan), the first step in the universal pathway of CoA biosynthesis.	3.80821e-42
NZ_CP053452.1\|WP_171474473.1\|7722881_7725719_+\|DUF1553-domain-containing-protein	gnl\|CDD\|377872	pfam07583, PSCyt2, Protein of unknown function (DUF1549). A family of paralogues in the planctomyces.	3.87378e-108

>NZ_CP053452.1|WP_171474482.1|7735488_7736256_+|type-III-pantothenate-kinase
MTPDVVVDIGNTRMKWGRCADGCVADVVRLPLDDAAVWEAELAQFPAPRTGARRWAVASVNPPALHRFVAWARDHGETAVFEDYTALPIRVSVDEPARVGLDRLFGAVAARALVPAGAPAVTVDVGTAVTVNLIDAAGSFQGGAIFPGPRLMARALNEFTAKLPLSEPRNNYADFRAPAKNTADAIRTGILAALSGGVVQLLGALADQCSVPLWVFVTGGGAHLLDGLDLSRVADLVMVPSLTLEGIRIAAEALP
>NZ_CP053452.1|WP_171474481.1|7734370_7735492_+|GTPase-ObgE
MFVDRVELFVKGGDGGRGAASFRREKYIPLGGPDGGDGGNGGSVIVRADPNADNLAGLTMKKHWKAKNGEAGMGSKCAGKNAEDVVLLVPPGTLVRDRTRGNVLKDLVAPGDEVVVGKGGRGGRGNTHFKSATNRAPREFEPGEDGEERWILLELKVIADAGLVGFPNAGKSTFLSRVSRATPQIASYPFTTKSPNLGIVTVGDGPGFVLADLPGLIEGAAQGVGLGHEFLRHVERTRVLIHLVEPFPADGSDPVHNYHAIRKELREYAVPLDGKPEVVCVSKAELTGADEVRDKLAADLGHEVLLISSVTGQGLHTVVGRVTQMLADIKRDEALAAARKKPTEFPTEAAIRTGDFQTTAVTSITPPVEGEVP
>NZ_CP053452.1|WP_171474480.1|7732335_7734273_+|arginine--tRNA-ligase
MNLLTQVRALFEPAITALAPDKAKVPDYLNAIKPSSNADNGDYQANCAMALGKALGQKPQDVAKALVAHLPANDLLEEPTVAGPGFINLRLKSDFLAKAVQSIATDPKLGVAPAAEPKTFVIDLSGPNVAKPLHVGHLRSTIIGDALVRILRFLGHTVISDNHLGDWGTQFGMLIYGYRTFLDKKKYGGSNEDKVRELARLYVLVRQVAGTIDIISRGFTHFRDEGAFQANPVAELTRVYVNGLKRASAPDDDDDEGGAAGPPASNPVADGFRQETAKLHEGDAENLKLWREFMPPCMEEIHKVYKKLEVIPFDHEHGESFYQPMLAGVVESLRSAGVSEEGDGGSVIIRFGPENVALIRKRDRAFTYTTTDLATIKYRIETFKPDAMLYVVDFRQAQHFANLFEASRRWGYEGVELNHVKFGSVLNKDGKPLKTREGGTTELTTLLDRATELGGALFEMTYWQRKANGHDVPDWKEYTEDEKANIASAVGIGAVKYADLSQNRTTDYKFDFAKMLATDGNTATYMQYAYARCRAIFRKGDIDEARFRANPPAVAITHPAERTLALQLLRFPEAVEAAAADYLPHLITAYLWDLAKCFSGFFEGCPVLKAETPELKESRLLLVDLVGRVIKQALDLLGIRVVERM
>NZ_CP053452.1|WP_171474479.1|7731781_7732201_+|ribosome-silencing-factor
MNTATLSTLSPVSSVPAPQPTPISSALHRACLAARTAADNKGRDILVLDMRSCTPLFDFFVISTGTSRRQLHTLAEETDAALRADGDTRLGIEGYEASKWIVQDYGDVMVHVFDPDTRDYYKLEELWADAKKVDWERED
>NZ_CP053452.1|WP_171474478.1|7730335_7731343_-|phosphoglycerate-dehydrogenase
MSRRVLVAPAPLREIEHTYGPILRAAGYTIEYPPRHLPGSEKQMTEPELLVHLPGCVASLAGSEPYTRAVIAKAAEAGLKVIARAGVGYDAVDLQAATDHGVAVCYAPGTNQEAVAEHAFMLMLALTRKLREQDTEIRQGLWPRRAVGNLRGTTLGIVGLGRIGKAVAQRAVPFGLKVLATEILPDEAFAAAHNVTFVPIEELLARADVITLHVPKTPLTKNLINRDTIALMKPTAFVLNTARGGLVHEQDLYEALVAKRIAGAGLDVYEVEPPGTNLLFSLDNVLLTAHTAGVDKQSRLDMARVPAHAIVKLLAGEWPADWVVNPQVKEAFFAR
>NZ_CP053452.1|WP_171474477.1|7729295_7730243_-|ABC-transporter-ATP-binding-protein
MPENVIEIEHLVVRYRGKTALDGLDLRIPSGAVYAFLGDNGAGKTTTMKILTGLAPPDSGRATILGLDCWARATELRHRVGYMPERPRFYDWMSVGDIGWFTASFHKPGFLTRYREWTERLGLDPTKRLKDLSKGGYARVGLALALAPDPEVLLLDEPTSGLDLLTRREFLAGLADLAASGRTVFITSHSIAELERACTHVGLLREGKMILSTTLEEVRKQVRRVSLRFTSAPPDPTGLGTILERNGTGRFWQVLVQDPDPAAIAALRERADLSDVEDVAVSLEEVYAGLMAKSVAPAESSGGPPMVWRGPNPAR
>NZ_CP053452.1|WP_171474476.1|7727245_7729207_-|hypothetical-protein
MIRAVVWKELREQGLIAVMLAVLGGALLVAAAVFADPPMPNAPMTDIVAALGAGRLLTLMLVVTAGMVCGGALFAAEKESGTIAFLEALPTGHWALWRAKVVAGLLLALAEVLALMAVAAALGLADVSFLARLLVYALLAFAWGTLGSTLARTTLGSVGIAIPAATLASFAFLFPIVLLFARPGAGGPPPTGWALFELLMVGTPLAISAWRFTAPDRARSAEIVGAGPWTRGPSVRPRKPGTGARALAWLTAQQLRTPGTVLSLFALAFGLALLLPNMRPLVLWPVLALAAGVLAGVTAFGDEQAHQTARFWSEHRLPVGRAWWVKIGIHFGFLLWLLVLLALPSVLRAQVETTEGFGRGRSSFAGVFQSRLFDELGAQTLKFLLVPAVYGFAFGHVCGLLFRKLVVATGVATMLAGTCAAVWEMSLLAGGVTHWQVWLPAGAVLLTGRVLIRGWAADRATARGPLTRLCVATGVLVVSLVGGVAYRVLQVPDDPTGADDAAFVARLPNYDENVGGRDFRTAADRFARLAAASVPEPSRVPDARRRPRVDERLDTAARFGWPTDDPELAEYLDRVFDDPPTAPGDKPWPNMAADAARLPLGVYELPQLVGTTATTATALDNARRMPSRSWSAVSRNRRTTRTRYPRRSTLSPR
>NZ_CP053452.1|WP_171474475.1|7726391_7727237_-|hypothetical-protein
MRCGGGLLALDAAGETERAAARAADQWLAHLTGRADLARALARTAAGADDPAPFDPRPYHLVDRYVIRGQMRAPGQWLTAALTPSRGDPERAAAEADLVAFAWSLPWERERTRRLVDRAPDPVPRTWFYQLVFGRPGAGILFRGRPPVDLAEKEAQLRVARRALILTAAISAYQMERGGPPAALADLVDQGYLDRLPDDPYAGGKPFGYRVSSGEMLRAQQSVSSQGRAEDRVLTLDVERGRALVWSVGADRIDQGGHVPPDSQRAEDFVFLAPLPPRGPK
>NZ_CP053452.1|WP_171474474.1|7725779_7726133_+|Uma2-family-endonuclease
MTTGAAVPITEAPLSAEQYAALPNDGRLTEPVQGKVVETPPPGTLHGYITANLTSILREFVRAHGLGRVVGNDAGVITRRQPDNVRGPDVAFFSYARLPKGRYRKVTPTPYRNWCSK
>NZ_CP053452.1|WP_171474473.1|7722881_7725719_+|DUF1553-domain-containing-protein
MRISTAAVLTLLTSTALSRAAEPVNNEYFESKVRPILVANCVNCHGATKQKGGLRLDAKAEFAKGGDNGPVVVPGDPAKSLLVKTVAYEDDTKMPPKGKLTDAEIAVLTAWVKGGAPWPDDGAIAKEAGDKFDLHARAKTHWSFQPVRRPAVPELTGAAKSVAANEIDRFLLAKLGAAGLTYARPAEKRTLLRRVYLDLTGLPPSPAEIDAFLKDESPRAFEKVVDRLLASPAYGERWGRHWLDLVRYAETHGHEFDFEIPDAWRYRDYVIRAFNADVPFDRFLTEHVAGDLLPPRRDPKSGVNDALIATGFWWLGEAKHSPVDSRAEFADRTDNQIDVFGKTVLGLTISCARCHDHKFDAIATKDYYALFGVLSSSRYNRADVSDPVPAVKVLGELKAVRAELAARVPVTKAEVPSSPQLGAWREKTVAFELFGPDWRKRWDADGLAFRPGAGEGFPHSGREAGKLIGALRSPTFTIDKPFLAVRTAGRDARARLILNGLQLIQDPIYGGLAQGINHGSELRWTVFDLRMWKGQPAYLELIDDGAGWVAISEARFADTLPPGEAGPQVPLPDPPASDDPELKRLRDRVRELEAKIPAPQRAPTIRDGTGLNEHVFVRGNHKTLGVEAPRATLEAFGQPPFSGPGSGRLELARTLTDPSNPLVARVIVNRLWKHHFGEGIVRSPDDFGRQGQAPTHPDLLDWLARELVAPERTTGGDARPWSLKRMHKLMVLSAAYQQASRTTPDQAAKAVTADPQNKLLHRQNVKRLEAEAIRDSILVASGRIDPKMEGPGVLPHLTEHQAGRGRPGSGPLDGNGRRSVYLQVRRNFISPMFSAFDYPTPFTTIGRRTASNVPAQALVMLNNPFVIQQAELWAKRVLAAPGSAEDRVRGMYATAFGRPPTQDELAAATGFVAEQSKEYGRPDDPKAWSDLAHVLFNAKEFIFVE
>NZ_CP053452.1|WP_171474484.1|7737541_7738864_-|RNA-directed-DNA-polymerase
MSTTTTPTDTATLWRLIVQAGGMTAYIDAQLRERGFLVPRRDADAMSDREKDAYKKALKQEAEERRKLRRETWGAYKANHIVHLGEGVFWTDEPKEDKWDTPNSEERAAENELPALDKPEQLAEALGVTVPQLKGMAYHRDAATSLHYVRFTIPKRDGTERPIWAPKKRLKAAQRWILQHIVERLPVHGAAQGFLVGRSILSNAQVHENPKVLLKMDIKDFFPTVTWKRVKGVFRRAGYRDGISTILALVCTEAPREVVTVEGKTYYVSLGPRCLPQGAPTSPALTNALCLRLDRRLAGLAKRYGWRYTRYADDLTFSLPMDHKGPPKLGAMMGCVTRIVAGEGFEIKEEKTRFHRTGGRQSVTGLVVNGDGAPRTPRKLRRQLRSAIHKLKTGKPLKDGESLARLIGYAAFVHMSNQELGRKMLADLHGHEDKPSGDAK
>NZ_CP053452.1|WP_171474485.1|7738992_7740858_-|SWIM-zinc-finger-family-protein
MATTEPIVEVDSEAPPPTPSSGAHLAYAGASRVLTVGNAATVELYGNLDRSPVRFEATVKNPLRFREALSALYGVIGSDYRYAPKDRTQYIAYLRLKRDAAPLGVWHAQQAYFAWMLRNDPNALTILDPVVSVHPDQLTFEVFGKDESTYACLAFKRDAFTDLGPAATGTTNIDFSDALYASVQQIRGYRQTVLALGHDGAKPAPEARGAVLEKKIQVPDSWLRGFLQVQSAATLPFDHVQLAPMDLYNVLRHLRMNGDRKGKKRGLRFELVPAQQPRIVAEPWETVFTTTGDVFRGRAARLVRVWGRRRLMTVKRLLPFVQSVDVYLLGSGLPSFWVFRCGDITLTLGMTGFTSANWSSALGFNLLLPRKTQDGEPTRKVVAYLAKHGKADAKELAAQTEVKGSALVEAVQLGCQNGELMYDIADGVYRARPLTDKPLDLARLQFRNAREKVAHDLLTRRGAVRITGENRIAGIGLELTGTVTVTEDKRDYRPQMVLADEGQVRKVTCTCATFRKQGIKGGPCVHLIALRLAFAEKEAKKAKGDDAVKFETRAFAKRDGEVENVVQISLERDRIKYRWGRSGQTMRLQTMRFNSEADARQAYFAKLADLDAKGYLDAVAE
>NZ_CP053452.1|WP_171474486.1|7740862_7741210_-|hypothetical-protein
MSTAPSQQGRQLSLTDCLSHLAMIVGAIIGPVWGYAHYGVLGAFLGVPVGAILGLLSVFALFVTIVLSVAGALSAWALARRGPRGLVLLFRYGPEAVAKGEPPPGETNQQNEAGR
>NZ_CP053452.1|WP_171474487.1|7741206_7748058_-|HEAT-repeat-domain-containing-protein
MASAKWDPLRDRYRALLAFLRAYARVKDQIPDDGYDDTFETLDNMLYQFPDEMYGDLSDELAAIGAAEGEAVTATGPAAPLPTGSIPAAFRNFVALVELLDQQVMALHESDGGDDEDDEDGDEPEESGEKEAAAPEAPKTLGEAGPGKSQMYRGDIKAVVGVGGSLAFVTVHPEGAPTGLYWLDVDKLSLQHHDLKCGGTAIAADGSTVYVGGTDKCVHECGKKAPKKLAGPFAGEIVAIVPIAKKRLAVLHGKQIDVVSDKDGALLQTLELPDTGTCLSADKSGSWLAAGTVKGTVAVFDGQDKDEFELSEAAKLHDGAVTVVQFEPEELRFFSAGADNKLLTTFARGSLEPEDKGRTNTHEDVLTALVFVPGDRFVTGSRDCTLKNWPRPGAVKPSTLKDVVGHVVALGVVTVYNQPHVAVACDDNSIRLIKLEADGKFPDDPVTAKVTGAADWVRNELAQKYEPKRREKALKVLAEWNDAASIEILGEQINRDPDHQLRLLAAQLLAVSFNPRVGKILERAIGHNDAKVREIAFKGLFRPLKPDLGPIDLALKTGHADVGVLAVRALEPLAKADDQALTRLVDALDATTWDVRRAALAALETVYGTKVPTASLTALSSKYGDIRVAALTLTYERRLLDETAVQSAIRRRLEDADAGVRKVAFLLSVLSKGHLATVLRASDPELHRQLNEIEAGSSTDKKEKSEKAAPTVPPDAKSQLTPDDYDTLLQATASRALDTCLRGARGLAVLGDPRAFGLLLQLSREEEVNARVDVCRALAALDDERAVNRLRSLLFDKEASVRDAAYTALVKIFDKTPLSVAESGLTAADEDVRRRGLETLIQTIKKKKPTAAGEPGWDLLVRALNDGARGVRGEAFKSALNLKIAGGGANTLRFTLQSIHPDVRREALTEVTAQEKEEWAAPLLYEFFNDADAALRKEAIEYATKKNKDIAVLETALASRYPDARKLAVEGLIKKHSKAAQQVLLRAIDDPDRDVRLLAVTALVGDDAQAPLAKALESARADIRVRAAAALARHGDATAYPVLTALAAAPEPPLKERVGDWLEVADLALRGLGELGDPRALGTVVPLLDSPHAKLRKAAAHALIWVSKAETTDALRSALRHSDPEVKVRAALGLAYLGDATVAPFLRSDAAAQIVTPTEQFTATVALGAAAGVQGTVYLDSADEKLRDRALLATLLLELKDTDGQPEKCIECVSAKGARFRLTGAQALEAFADPASFRAFVIKEVNDRGDDAPWKVAPEVVDDLANLLAFAAPQLKAKTALLLRFFDNKEQAEWNAEWGVHAARFAHDIRAAADAAKRAGVPVASKLSAEQLRELAFGGYVGLVREQGASGGGQPIARVRQTALARIFAIASKDAVYSRSAQPVLAQAMGDPNQPVRTQAFEHLHALGMDKAQLGAEALEAGYTDLGVKGLELLTDGTSAKKGEAVLERVMLSRSDDLAIEAAKLLRDRQGKVPVAKKALDAVYEPMRLQAVEWLASAYETSPDAQLALRAAVESRYRKVREKAAFELAGKKDGAAYDALTKFLGEAHDAARQFAIINALVGLGDRRAADAFLDRIENDPAGTAQAAALLAACAGFRVPATADRLFLMLDRMKNLQDPIHAALLTVSGHDQSIGDPDDERPQDRQTWMKDQHPRHDAILARLIDRAFTIGETDAIVSTLLAPARWSLGQEVNTILATLCTSPNAELRDAAVQAYGWRFRKRAAPVEPLLKAVKHKNPLTQFLAAEGLARGGRAEGMQVLLSGIEYLEDHSHRVRAVQALGELGDARSVDKLLALASEDGSPLQEAATEAIGHLKKSPQADTVFRLLEKHAKGLSGTAQRALVGLRWFDTPSGWDLVRARVTAKGYGWMLNRIRATAAEQLGYNDDPTTRTLLVKTIRTSTDYELVMAAYASARRLWGKGSLEPNYNLLQNPQAHSYTGNVNEDGGALEPVVKSGDPLRIMEIFPNCTPPVQEQLESALLTRPDLPVKEAVASLAHADEGTVRLASRILGRVPNPDASVKTAVGGALTKWWATWQERRVKPGAAAALAKAGEVVESLLFTAGRAGVPTKVLADVAKSRPDDPFARGIRLEAVRCLVLGTVAPEVLDTLEVLVVGPDADVRVLAAELLARFDARRAAKMAEKLLSDRPSFNRVVTAGAVKAADVKSAAASPHVQPVALPLFVAEKDVLTLAAVARDRKAPEAARFGAVEGLGVMAAEPAEAVLVEIGTAKDDEKELRKAAWRALRRSKRARQRGAVNTLATLPKAPKKAKPAAGATGGSVQGDEQ
>NZ_CP053452.1|WP_171474488.1|7748059_7751341_-|hypothetical-protein
MAAVLTLDDVRTAWDARDPRLITLLEQLCNQPVPAPDTPIRAGALTFDKFLAQLRDWRYRQKTREEQAHFRIETLKALEAPDAEVPLADKLKVHEVISTLWQSNDALARDYLLRIIARVPLVYGPWKAIKKIFKEAEAKNDTEIYGAISARLDMAHAGSAPGRQVSGATIAYLVRRAWRYLRRVGLHLPATYPDAACDFLVNYTDNFHSHRSWVFNHIFFHETKKYGRANFHFGYGDKQDPADLKKRAYGDLWKRSHRPLFSLLERAKSDTVRDYATSALKTDFRQILRDTDPAWVVRLVGVQSRAIDDFVVWLLQNVPKFEQSAFRTLGLHDAVLKLFDSPSAEARKYAANYARTHARDLPVRELVRLANNDNDEVRKLARDLLGEKDPRTGVGLDAWGQLLETQHGHKFAADAITKHFGAKELTPEWFQGRMLSDSEPAFEFATKLLPKVHALKDLGPAFFVSLLQKVDPEGYKTNRIVNYAATELAKHFELDALDRELLRWLALFPPTAGYVTNWVHQGKLKKAQALGMDFLKLLAFQPDWDEAPWLTEFRAKNGQWAKELSFDETRAATVLRWFQDVRKFTTTELGFDWLMRLVARSEPLYHDFASDRLIRTFLPADFAKDGVAATAATAASTARGPVDLGKASFCFTGTPANITVKDAEAQVKAANGTVAANVSPKLHYLVVGDSGSAFLGQGQKGAKYLKAEELNEKGANIRIISETMFLQMLAGEQRTVAVDAATSGCERLWRLIIAPGPADAPVGRFAREYVRRHHPNIAQKLTDKPVDPGAEVPASFLTLDRVYPLFSESRKPLREFALELASWEFARWNPGVDHLVAMADIPFMDVRRFVAKSLLAEDTPPNRPFRLDPGKLEASAVYRFCESNDEETRALGMELIRRLPKLRVPEELFRLAESPDRKVRAFVIRALWTVYRDRGLTPDWKPPLPPKPTVGAKAKKDAEKAAANRGEGVPHKPETWPAEKPTLSEFLRRILFEIPPGRPEKSRDAVEDTDPNDPEAAKPDKVVSVKPLPARRAKLDLIEVMRDLGLEEKAFGRGILPLLDEFLMSRGTSERAACLVAVTRIRHKYPELKKGGA
>NZ_CP053452.1|WP_171474489.1|7751917_7752895_-|SMP-30/gluconolactonase/LRE-family-protein
MRTTVASVYIECTDESDRFLPEGPRWLTVQERPALVWVNIQLSATATEGEINVHFPGTDGSGDTGQPCPGRPGFVLPLEGEDQVLAGVDKALRLCDLAEGAWTDPLATVPDDNPRTIINDAEIVPGGKAVVFGTKDTKFDTEARLAQLYLYTVDDNRISVLADKQVCSNGKVFVSDALGLILYDIDTPTRKIVRYRLDVAARTATLDGVAVDLANQVGSPDGMRGCGDGTAIVAFYNPEFAEAGRAVRFNLTTGEAIEEWLTPGSPRVTCPLLVKRPTGVKLILTTATEGMPADMRAKCPNAGCLFIADTQFTDCPPQEAVRVPV
>NZ_CP053452.1|WP_171474490.1|7752984_7753776_+|SDR-family-oxidoreductase
MLMGKTALVTGSSQGIGLGVAQAFAASGARVVVTSEKPLANCPEVQRLLSDYEHTRYVRADLLAEGAPEQLVADAWAQFGSIDVLVNNLGTYREPPLDRITRDHFDFIFRLNVWVPVAVTREVVRRARAAKRGGRILFSTSLNATRSEPLHTLYDASKGAVNALTRQLAVELAPLGFTTAAVAPGLVETPLTDFGLKSSPAERDAITAQIPLRKIATVEDVAWWYVFLASDRASYSTGSVFTVDGGLDAQQMATRPVTDAERV
>NZ_CP053452.1|WP_171474491.1|7754167_7756687_-|hypothetical-protein
MTARLTLAAATLAGCAAAALGADVVILKDGFVIQGNVRKEMTSTFDKATGRDIPMVKANGFDMIDEGAKLTIFSTHAKQLGAISPDVKLRPAMKAYEMPFPGRKANNPLPAGATIKTGEYNAKWIRTLTVAVSGAAPERVDQQITYMDPYFIYMVSATHLWRLTYRTAEWDPKLVRKLLLMHPDIAEPDGRCDPAKRVALAKFMLDAGWLQIAKDEVDRLKKDFTGEMGKDTKEQHEKLLKEIDQQTAELVVREAELALAAGRYKYAAELLAAFPEKTAGPKEVARLARVAADLKASQERYDTARRLLRGLIDEATGLPALNARIAAAGGPALATWQPPKNTPGLTLDLAAAAEQVAAELHPDSALRIETFITLGLQDERQRRDGAARTKTPDQLLASAVSGWAKGKNGATPKPENAMTLWRTREAVLAYQRAEALNDRTAVLGAYKKNISLSIDEIAQMISLLPPANAEDLDHRTGTPVELGATKDTGIYRRTTLPVFGHALGLDYLVRVPPEYHHGRQYPVLIVLSTPGIRNEDMIASLIPQADKNGYILVVPEWTGQFGKGWEWKGEDHVWVTAVLRDVVRHFTVDNDRVFMTGVGDGANMAMDVGMSHPDLFAGVIPMGPIPDWRNLFIAYWQNAQKLPFYVVTGEQTGEGISNLRLIYEKWMPRGYPSLMSVYKGRGVEWFAGEVPSVFDWMGRKTRVNGTATLALGNGAAARQAWAMLRDTDTRFYWLQAQGIEPGRLGGAVVPATMIGDVRGNNLVDLRAEKVKHVTIWLSSEMIDWTKPIRVQINGSLPDGYPRVGRKLEPNLEILLEDYYERGDRRTLFLNKLELDVRNR
>NZ_CP053452.1|WP_171474492.1|7756857_7757265_+|hypothetical-protein
MPIRFRCSFCNRLLGIATRKAGTATTCPHCGCPLTVPLPQDDGRTERVGLEEIDALLGNTSTEAAPQAVAAPRPAEAPTAPAFERAQVPPPPPVPAARPDDRPLFEGDVDALLGASPAPPNRTGRSRPRCPGRTP
>NZ_CP053452.1|WP_171474493.1|7757492_7758527_+|DUF3500-domain-containing-protein
MQPADTLTSCPSCESGIPLGRRDFIRVLGTAAAAAAVGLTPLQKARAARAEKQAAAEALVFELFQTMTAEQKKKLLRPWDHKPTAKDKVPTRFATGNAAVEKLYIGTEYKKTQVELLDKIFRALGNGEEGYRELSRGGRFDASGDFESISALIYGEPVEGKKFSLVFTGHHLTVRCDGNSEEATAFGGPLYYGHTPNGYATTNVFYKQTRAATELYSALDADAKKVAVKSGTWHDEHGGVKVPKKGAKVPGLCYKDMTKDQKEQTEKLMKQLVSPYRKEDGDEVMELIKATGGMEKLSMAFYEEDKTSEKEPWSFWRLEGPGFVWSFRALPHIHTFVHVKGELV

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Crispr_ID: NZ_CP053452_33

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053452_33

8588351-8588447

Orphan

Consensus_repeat	Method
CCGACCACCGCCGCCGAGCTGTTCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP053452_33

>merge|NZ_CP053452|33|8588351-8588447|CRISPRCasFinder
CCGACCACCGCCGCCGAGCTGTTCGATCCGGGCGAACACCCCGTAAAGTGCGGGCAAATACGGGTACGAAGGCCGACCACCGCCGCCGAGCTGCTCG

>NZ_CP053452|33|32|8588351-8588447|CRISPRCasFinder
CCGACCACCGCCGCCGAGCTGTTCG	ATCCGGGCGAACACCCCGTAAAGTGCGGGCAAATACGGGTACGAAGG
CCGACCACCGCCGCCGAGCTGCTCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053452.1\|WP_171476247.1\|8599002_8599641_-\|pyridoxamine-5'-phosphate-oxidase	unknown	unknown	gnl\|CDD\|235555
NZ_CP053452.1\|WP_171475049.1\|8592182_8592422_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171475041.1\|8583504_8584551_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171475039.1\|8580774_8581482_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|370640
NZ_CP053452.1\|WP_171475045.1\|8586138_8586339_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|173779
NZ_CP053452.1\|WP_171475043.1\|8584847_8585177_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|378935
NZ_CP053452.1\|WP_171475042.1\|8584654_8584855_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171475040.1\|8582834_8583398_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171475056.1\|8601489_8602197_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171475046.1\|8586404_8588294_+\|NTP-binding-protein	unknown	unknown	gnl\|CDD\|273716
NZ_CP053452.1\|WP_171475055.1\|8599912_8600872_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226119
NZ_CP053452.1\|WP_171475052.1\|8595950_8597240_-\|glutamate-5-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|234685
NZ_CP053452.1\|WP_171475053.1\|8597250_8598099_-\|dihydropteroate-synthase	unknown	unknown	gnl\|CDD\|273657
NZ_CP053452.1\|WP_171475044.1\|8585253_8585661_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171475051.1\|8594364_8595522_-\|HEAT-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|224331
NZ_CP053452.1\|WP_171475050.1\|8592656_8593853_+\|WD40-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|238121
NZ_CP053452.1\|WP_171468891.1\|8581703_8582018_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171471169.1\|8579423_8580580_-\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP053452.1\|WP_171475054.1\|8598181_8598757_-\|glutathione-peroxidase	unknown	unknown	gnl\|CDD\|238207
NZ_CP053452.1\|WP_171475048.1\|8588754_8589591_+\|DNA-adenine-methylase	unknown	unknown	gnl\|CDD\|223415

Protein	Function_ID	Function_description	E-value
NZ_CP053452.1\|WP_171476247.1\|8599002_8599641_-\|pyridoxamine-5'-phosphate-oxidase	gnl\|CDD\|235555	PRK05679, PRK05679, pyridoxal 5'-phosphate synthase.	1.57798e-120
NZ_CP053452.1\|WP_171475039.1\|8580774_8581482_+\|hypothetical-protein	gnl\|CDD\|370640	pfam09731, Mitofilin, Mitochondrial inner membrane protein. Mitofilin controls mitochondrial cristae morphology. Mitofilin is enriched in the narrow space between the inner boundary and the outer membranes, where it forms a homotypic interaction and assembles into a large multimeric protein complex. The first 78 amino acids contain a typical amino-terminal-cleavable mitochondrial presequence rich in positive-charged and hydroxylated residues and a membrane anchor domain. In addition, it has three centrally located coiled coil domains.	0.00665492
NZ_CP053452.1\|WP_171475045.1\|8586138_8586339_+\|hypothetical-protein	gnl\|CDD\|173779	cd01029, TOPRIM_primases, TOPRIM_primases: The topoisomerase-primase (TORPIM) nucleotidyl transferase/hydrolase domain found in the active site regions of bacterial DnaG-type primases and their homologs. Primases synthesize RNA primers for the initiation of DNA replication. DnaG type primases are often closely associated with DNA helicases in primosome assemblies. The TOPRIM domain has two conserved motifs, one of which centers at a conserved glutamate and the other one at two conserved aspartates (DxD). This glutamate and two aspartates, cluster together to form a highly acid surface patch. The conserved glutamate may act as a general base in nucleotide polymerization by primases. The DXD motif may co-ordinate Mg2+, a cofactor required for full catalytic function. The prototypical bacterial primase. Escherichia coli DnaG is a single subunit enzyme.	0.00323883
NZ_CP053452.1\|WP_171475043.1\|8584847_8585177_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|378935	pfam12728, HTH_17, Helix-turn-helix domain. This domain is a DNA-binding helix-turn-helix domain.	5.27022e-06
NZ_CP053452.1\|WP_171475051.1\|8594364_8595522_-\|HEAT-repeat-domain-containing-protein	gnl\|CDD\|224331	COG1413, COG1413, FOG: HEAT repeat [Energy production and conversion].	0.000281574
NZ_CP053452.1\|WP_171475046.1\|8586404_8588294_+\|NTP-binding-protein	gnl\|CDD\|273716	TIGR01613, putative_primase, phage/plasmid primase, P4 family, C-terminal domain. This model represents a clade within a larger family of proteins from viruses of bacteria and animals. Members of this family are found in phage and plasmids of bacteria and archaea only. The model describes a domain of about 300 residues, found generally toward the protein C-terminus. [DNA metabolism, DNA replication, recombination, and repair, Mobile and extrachromosomal element functions, Prophage functions].	8.67163e-50
NZ_CP053452.1\|WP_171475055.1\|8599912_8600872_-\|hypothetical-protein	gnl\|CDD\|226119	COG3591, COG3591, V8-like Glu-specific endopeptidase [Amino acid transport and metabolism].	2.5942e-11
NZ_CP053452.1\|WP_171471169.1\|8579423_8580580_-\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	7.78642e-70
NZ_CP053452.1\|WP_171475053.1\|8597250_8598099_-\|dihydropteroate-synthase	gnl\|CDD\|273657	TIGR01496, Dihydropteroate_synthase, dihydropteroate synthase. This model represents dihydropteroate synthase, the enzyme that catalyzes the second to last step in folic acid biosynthesis. The gene is usually designated folP (folic acid biosynthsis) or sul (sulfanilamide resistance). This model represents one branch of the family of pterin-binding enzymes (pfam00809) and of a cluster of dihydropteroate synthase and related enzymes (COG0294). Other members of pfam00809 and COG0294 are represented by model TIGR00284. [Biosynthesis of cofactors, prosthetic groups, and carriers, Folic acid].	2.9521e-115
NZ_CP053452.1\|WP_171475050.1\|8592656_8593853_+\|WD40-repeat-domain-containing-protein	gnl\|CDD\|238121	cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment.	1.08099e-59
NZ_CP053452.1\|WP_171475052.1\|8595950_8597240_-\|glutamate-5-semialdehyde-dehydrogenase	gnl\|CDD\|234685	PRK00197, proA, gamma-glutamyl phosphate reductase; Provisional.	0
NZ_CP053452.1\|WP_171475054.1\|8598181_8598757_-\|glutathione-peroxidase	gnl\|CDD\|238207	cd00340, GSH_Peroxidase, Glutathione (GSH) peroxidase family; tetrameric selenoenzymes that catalyze the reduction of a variety of hydroperoxides including lipid peroxidases, using GSH as a specific electron donor substrate. GSH peroxidase contains one selenocysteine residue per subunit, which is involved in catalysis. Different isoenzymes are known in mammals,which are involved in protection against reactive oxygen species, redox regulation of many metabolic processes, peroxinitrite scavenging, and modulation of inflammatory processes.	2.55998e-83
NZ_CP053452.1\|WP_171475048.1\|8588754_8589591_+\|DNA-adenine-methylase	gnl\|CDD\|223415	COG0338, Dam, Site-specific DNA methylase [DNA replication, recombination, and repair].	7.04182e-39

>NZ_CP053452.1|WP_171475046.1|8586404_8588294_+|NTP-binding-protein
MPAGCTPPSAGRSAGAPPADAKDVRDWLTDDARAALPWDRRGAELRDHLTAAAEVIGPPDPPPDPPAGAGARTPADGPNDAPDNPHRLAAGFLDSITPAGSPRLLRFWRGDFHRYRDGAYRPVPDDDQRAELTQYVRAEFVRSNAAVVAACEGEDEKKQPPRVRPVTSKMIGDVLQALRGLCLLPADTDAPAWIDGATGPDPAGLLPVGNGILDLGALVEGRGRCLLPPSPLFFTHTAAPFDFDPTAPAPCEWLKFLREVWPDDPDSIATLQEWFGYMLTPDTRQQKILFLLGPRRGGKGTITRVLRELVGPANVAGPTLGSLSTNFGLWPLLGKSVAIVSDARLSGRSDSAVITERLLSISGEDALTVDRKHREPLTAKLNARFVIVSNELPRLGDASGALAGRLILLRLTRSWFGKEDHHLFDRLRGELPGILLWAVQGWRRLRDRGRFVQPTSGAELVADMEDLSSPVGAFVRERCRIEAGSRVEVCELYSAWRAWCDEHGRREPGTEETFGRDLRAAVPSLDKARPRTRDGRLYVYVGIRLRREAEADDEPPPSGPGGPGGRSDHPLHARAGNGVESARGEHAEGERSAGVAAMGGRYDHPDHRAQTDRPRPRFTNNDRPHEWRE
>NZ_CP053452.1|WP_171475045.1|8586138_8586339_+|hypothetical-protein
MPGSKRGLTLPTGWRDRPGPVFVVEGPTDAAALTAAGLAAVGRPSNAGGGSCSPHCSATSTPTATF
>NZ_CP053452.1|WP_171475044.1|8585253_8585661_+|hypothetical-protein
MSNLPDDRQVGEALKRAAHRLLEAHRERLIRRARRALLCHLLAHRTATIDAVRAAVAVPPGVNPKAFGSVPGPLALARIIRPAGARKTARAIGHARPVTVWELADRAEALAWLDTHPDLPEPGPAVDDPADPFAL
>NZ_CP053452.1|WP_171475043.1|8584847_8585177_+|helix-turn-helix-domain-containing-protein
MSDLPTTPPAPAADLDALLTQLRDRLAPPAELLTRDALAALLDIGVSTLDRLNAAGRIGPRPVRLGGALRWHRAEVLAWLAQRDPRGELHDAATWPAVWDALRRRTATK
>NZ_CP053452.1|WP_171475042.1|8584654_8584855_+|hypothetical-protein
MSATLLPTDPPILLPDPDAIRAAIDAADERSRLLRRLLRLALRLQLHLTTAANLPAPTERREVSHV
>NZ_CP053452.1|WP_171475041.1|8583504_8584551_+|hypothetical-protein
MTGPQGDAPPSHDSLLSRILKERAERERRAAEDERHAATERAEREERARRLGALRDEWQNGWSNLLEHFDRANQYALRDFEDAGAALAAVGALMNRLSDEWLSLDTEQEFPARPSVALRLQRMVDYPDWFFGGLRTCGALLLEAAQGGTPAYLAEQLRQLSGSEALRPAFGWLEFCRDRLFPPQCPPLRGVGWMTEQAEPAVRWHVRDYEVAEAILGGGADPRKVNRKSGPPRQPPCLPDDRPEPANAPADQPDPQATAEPTNGERADDATDSPTWNELGEAKKTILTVLARAADPMQNPAVAQKAGYKPGTLRHHYGGLKDWRFVELTKDGYRITPAGRALIPPDKV
>NZ_CP053452.1|WP_171475040.1|8582834_8583398_+|hypothetical-protein
MTAKTRARSHADGLTLDQQSAVDLLAGGKTDTETAAALNLNRVTVTRWRLYSLEFRAALAVRRADVWGAAADRLRALIPKAIDALADALADTTNADQRVTVALAVLKLAGPPAIPPDTPTDPNEIVREIVEREREMMRDRNDDSLDAVLGKPPYGEHVNAVRKRLALLSAVPKDEPQPVLESEGEPR
>NZ_CP053452.1|WP_171468891.1|8581703_8582018_-|hypothetical-protein
MNIYSGERSATGRIRVRVNGRPLNPRSSQDPNNGAEDGFGWGFAGHGPAQLALAILLDVTGDSDADEFDQRDFQRQFVAQWGDRWQITDVQVREWLETSRTLHG
>NZ_CP053452.1|WP_171475039.1|8580774_8581482_+|hypothetical-protein
MRLACLAQTLVAITIVTTFARVDGADDPPTEIEKARSAYEKAREKHQAELLKQFDEAAERITKQKVAAEERAKRVDAVKAEKGRFEKEGLIPWSESMRPHLAGYQKNLAVAEAPLKKAFDRDIDRALKAKNTAHVNRLRADLITALDVKVVATWSHGTEVPGSGHEIQLYSNGKIGGPDSGATWTFQNGILTLRWPNATAPGGAWVDSCSVSADGRTYSGKNQKGVRIGGYYVAK
>NZ_CP053452.1|WP_171471169.1|8579423_8580580_-|IS3-family-transposase
MARKTYTREFKLQAVQMLTDQKLSVAEVARKLGVSEGCLRAWKSAAQADGAGAFPGHGNATPGDDELRRLRAEVTRLKAERDLFKKSRGVFREPAELTFAFIAANEDQWPVRWMCDALDVSASGYYAWATRPDSATEQWRRELLSQIRAVHAEVKHRYGSPRMRAALNARGHECSENTVAELMREHGIRAKAPRRFVRTTDSRHQLPVFENVLDRNFEPDGPNRAWGTDITYIPTADGWLYLAVVEDLFSRMIVGWSMDASMESRLVVDALDMAVARRCPGAGLLSHSDRGTQYASAHYQGVLAGHGIVCSMSGVAQCWDNAPVESFFASLKRELVHDEEYTTREQAKGSIFEYLEVFYNRVRLHSSLGFLSPAEFERTYNQKHP
>NZ_CP053452.1|WP_171475048.1|8588754_8589591_+|DNA-adenine-methylase
MTTATPAPPLKWHGGKHYLAARIVALMPPHTHYVEPFAGGLAVLLAKNPDGVSEVVNDRNRDLSNFWRVLQDADPFDRFRRAVEAVPFSEVEWTDAADRLADPDPVTRAVAFFVRCRQSLAARMRSFAPLTKIRTRRGMNGEASAWLSAVDGLAAVHARLRRVVVLERDALDVIRKEDGPDTLFYLDPPYLPRTRTAPDVYAHEMTADAHRELLDAVKRVRGKVMLSGYRSALYDGALAGWARHDFELANHAAGGKAKRRVTECVWCNFAGPTDPRRC
>NZ_CP053452.1|WP_171475049.1|8592182_8592422_-|hypothetical-protein
MVRKLILSTIVATAAVTNLVAAQDSETLTPTHSDHHYKVLVLRGGDGWQLHRTYRLHAEARRDAIRLWHDGYRVVIWDF
>NZ_CP053452.1|WP_171475050.1|8592656_8593853_+|WD40-repeat-domain-containing-protein
MNPCRLALFVLGVASVLPTTTAAQPVPVKAHGALVHSVAVSPDGKILATAGFDNLVKLWDIGADGTLKLAKVLVGHTAPVYAVAFHPADAKIVATASQDKTARVWDVTEGKAKAGSKDAPEAVFEVSKAKFELKGHSDIVDTIAFSPDGKTLATAGADKAVKLWNPADGKEIKALGTHDGSVYAVAFSPDGKLLASAGAGKDNLVKIWDVKEQRELTQLRGHEQPVTAVVFADNERVVTASMDRSIRTWTTKEAKKEPKEVKDPKDSKEPKKDAKDAKDAKEPKKDVKDTKEPKKDTKDSKDPKDTKEPKDTKDPNELKKFGPTTDDPYAIAWSPATKALAVCGYSGQITVWTLDADKPKFTRAIKSPGYCVVFSADGKGVFTGHDNGTVAFTPIVTK
>NZ_CP053452.1|WP_171475051.1|8594364_8595522_-|HEAT-repeat-domain-containing-protein
MVLGGRRGRAAVVARGEALPAVLRCADATAGLPPGAMLAAEAVAFPNFLTAIKQPDSFVGRMALRALVSTSRATRDGLLDPGSLIRAGLGDVLAESAARANADADPWHAMAVIETERVFRRLGHWARVLSSQVRGHAERQAMRLWATSDRRGAWLAGAANRLRARFPAAGGEEQGAILRCLTELRADVTSLFPHLPDRRSPWWTDAVRALRWSKSPVVGPVLAGQAVRLARKTRTHGRAATVLSALRGHACHETERVLLRSVGATNPALRHAAVGSLGWWPPFDPDRVVRALRTARTDPDNQVRRSAVSALARLGERPALAEVTAGLHSEEPAIRADTAARVAAEELTWLWPDLETAAAADDSDTALAACESLERLREGLFGFAM
>NZ_CP053452.1|WP_171475052.1|8595950_8597240_-|glutamate-5-semialdehyde-dehydrogenase
MSALLTNSDPVEELGSLCADLARRAKVASGALAQVPTAAKNRWLLASAAALELRAGELLAANAKDVAAAPGFGLNAAAVDRLALNPKRIAAAAEGLRQVAALPDPVGEVREATQRPNGLQVLKVGVPLGVVFFIYESRPNVTVDAAALCVKSGNAVILRGGKEALHSNTALHSLLSDELTRCGIPADAVQLVPTTDRQAVGYLLSMNSYIDLAIPRGGKSLIQRVAAEAKMPVLKHYDGVCHVYVDGAADLAMAERIVVNAKCQRPGTCNAAESLLVHAGVADVFLPQIARALAAQGVELRGCPETRRRVPTVTPATDDDYRTEYLGLVISVKVVANLAEAVAHIGTYGSHHTDAIVTRDLNAARAFTQQVDSAAVVVNASTRFNDGFELGLGAEIGISTDRFHARGPCGLRELTTYKYIVTGDGHVRE
>NZ_CP053452.1|WP_171475053.1|8597250_8598099_-|dihydropteroate-synthase
MNPLVWHLRDRTLTIGPRPLVMGIVNVTPDSFSDGGKWFDHSTAVAHALALVEQGADVLDIGGESTRPNAEPVPLEEELRRVVPVVAEVARRTTVPISVDTMKAGVARACLEMGAAIINDVSGLRDPDMISVAQKLRAGVVVMHMRGDPQTMQQNPRYADVVTEVTNYLQERLRALGECGIPAEAACLDPGIGFGKTLAHNLELLANLDAIARLNRPVCLGVSRKGFIGKVCGRQEFDRDTGSLVVGCIAAARGTAHVLRVHAVPGTRDATALLEAIDQHRR
>NZ_CP053452.1|WP_171475054.1|8598181_8598757_-|glutathione-peroxidase
MKALYIGALAALFGFAVTCQAEDKKVTSPLEYKMKDIDGKEYDLSKLKGKVVMFVNVASKCGLTPQYKGLEELYEKYQKDGFVIIGVPANEFGKQEPGTDAEIKEFCTGNYKVTFPMMSKVVVKGEGQVPLYKTLTEATPKDGKVEPISWNFEKFLVGRDGKVVARFSPRTEPSDEALNKAVKAELAKPAK
>NZ_CP053452.1|WP_171476247.1|8599002_8599641_-|pyridoxamine-5'-phosphate-oxidase
MPTLADLRKEYSTGGLTEADAGTDPFALFHQWFDQAVAAELSDPNAMILATCTPDGAPSARAVLLKALDARGFTFFTNYDSRKGHEMAANPSVALVFLWHQLERQVRVEGRVEVVTAAESDEYYAKRPLGSRLGAWASPQSAVIAGRAVLEQSHAELMAKYPDGDPPRPPNWGGYRVLPDVIEFWQGRRSRLHDRIRFTRTATGWQRDRLAP
>NZ_CP053452.1|WP_171475055.1|8599912_8600872_-|hypothetical-protein
MATRRPLDGNTASPEQLVAEMVEWTTEDFLAAEPYPLPEITETMLSDYLDQLASPSEKGGSFLPGGPPSPVDDKDSKDAGLLAGFPYPPPFNQHEVLVPYTTYPYCTIGKLFFKQGTGSYVASAAAIGKNGIWTAGHCVHSGNGQPSGWSTNLVFVPGYKDGAAPFGQFTMKQLFCRTNWYQKGNPGGLFEDMGAAILNPLNGRMLSQVVGWLGFAWNFPRNQIWTSLGYPAAPPFNGMRMFQDTAPYANDGAVPGSPSPIGIGCSMTGGCSGGPWVLGLGSTNRVNGHNSYRPNDQPLEIYSPYFGDNAHSLMQLVVQ
>NZ_CP053452.1|WP_171475056.1|8601489_8602197_+|hypothetical-protein
MLGRVGFVSLLLLLPLLAGGCFRGLAYPEFPACPGTTLPPTTDEVFAVRIDVTNERNGPTIQAATETERHTASRIDVTDGKVPEQRALTFSYWWVASTGDKPTTESRSHAVMVKLYRRGYRAIVLRPGDTAVASEWTPAPTPREQAIAIRDFAYAGRQPGVPPKPVPGQSVAAQQVAAQKTRVHLAPGSAGDHHKKVLVFMAAEFERVAGLYPPGSVEDVTLRKDADEVRQLAER

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Crispr_ID: NZ_CP053452_35

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053452_35

9114768-9114863

Orphan

Consensus_repeat	Method
CGTGACGGACGCGGGGCTGAAGGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP053452_35

>merge|NZ_CP053452|35|9114768-9114863|CRISPRCasFinder
CGTGACGGACGCGGGGCTGAAGGATCTTGCCACACTCCGCAGCCTCACCGAGCTCCGCCTGACGAACACGGCCGTAACGGACGCGGGGCTGAAGGA

>NZ_CP053452|35|34|9114768-9114863|CRISPRCasFinder
CGTGACGGACGCGGGGCTGAAGGA	TCTTGCCACACTCCGCAGCCTCACCGAGCTCCGCCTGACGAACACGGC
CGTAACGGACGCGGGGCTGAAGGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053452.1\|WP_171475384.1\|9115336_9117040_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|378963
NZ_CP053452.1\|WP_171475391.1\|9122396_9123695_-\|PP2C-family-protein-serine/threonine-phosphatase	unknown	unknown	gnl\|CDD\|225118
NZ_CP053452.1\|WP_171475380.1\|9106548_9107667_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171475388.1\|9119988_9120471_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171475390.1\|9121509_9122115_-\|DUF479-domain-containing-protein	unknown	unknown	gnl\|CDD\|377311
NZ_CP053452.1\|WP_171475383.1\|9110633_9113135_+\|phospholipase-C,-phosphocholine-specific	unknown	unknown	gnl\|CDD\|274561
NZ_CP053452.1\|WP_171475375.1\|9093341_9094340_-\|ribonucleotide-diphosphate-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|153108
NZ_CP053452.1\|WP_171475381.1\|9107951_9109109_+\|alpha-hydroxy-acid-oxidizing-protein	unknown	unknown	gnl\|CDD\|376451
NZ_CP053452.1\|WP_171475377.1\|9098150_9101147_+\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|224511
NZ_CP053452.1\|WP_171475378.1\|9101909_9103655_-\|PQQ-binding-like-beta-propeller-repeat-protein	unknown	unknown	gnl\|CDD\|224437
NZ_CP053452.1\|WP_171475382.1\|9109258_9110311_+\|deoxyhypusine-synthase	unknown	unknown	gnl\|CDD\|235043
NZ_CP053452.1\|WP_171475393.1\|9125738_9126959_+\|histidinol-phosphate-transaminase	unknown	unknown	gnl\|CDD\|235440
NZ_CP053452.1\|WP_171475387.1\|9118980_9119766_-\|DUF3859-domain-containing-protein	unknown	unknown	gnl\|CDD\|379007
NZ_CP053452.1\|WP_171475379.1\|9103683_9106002_-\|PQQ-binding-like-beta-propeller-repeat-protein	unknown	unknown	gnl\|CDD\|379140
NZ_CP053452.1\|WP_171475389.1\|9120552_9121290_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171475392.1\|9124305_9125736_+\|histidinol-dehydrogenase	unknown	unknown	gnl\|CDD\|119329
NZ_CP053452.1\|WP_171475385.1\|9117196_9117793_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171475376.1\|9097330_9097744_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235367
NZ_CP053452.1\|WP_171476266.1\|9094512_9096822_-\|ribonucleoside-diphosphate-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|178056
NZ_CP053452.1\|WP_171475386.1\|9118051_9118456_-\|VOC-family-protein	unknown	unknown	gnl\|CDD\|366361

Protein	Function_ID	Function_description	E-value
NZ_CP053452.1\|WP_171475384.1\|9115336_9117040_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|378963	pfam12831, FAD_oxidored, FAD dependent oxidoreductase. This family of proteins contains FAD dependent oxidoreductases and related proteins.	1.35483e-109
NZ_CP053452.1\|WP_171475391.1\|9122396_9123695_-\|PP2C-family-protein-serine/threonine-phosphatase	gnl\|CDD\|225118	COG2208, RsbU, Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription].	3.57431e-48
NZ_CP053452.1\|WP_171475390.1\|9121509_9122115_-\|DUF479-domain-containing-protein	gnl\|CDD\|377311	pfam04336, ACP_PD, Acyl carrier protein phosphodiesterase. YajB, now renamed acpH, encodes an ACP hydrolase that converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP.	2.01388e-34
NZ_CP053452.1\|WP_171475383.1\|9110633_9113135_+\|phospholipase-C,-phosphocholine-specific	gnl\|CDD\|274561	TIGR03396, PC_PLC, phospholipase C, phosphocholine-specific, Pseudomonas-type. Members of this protein family are bacterial, phosphatidylcholine-hydrolyzing phospholipase C enzymes, with a characteristic domain architecture as found in hemolytyic (PlcH) and nonhemolytic (PlcN) secreted enzymes of Pseudomonas aeruginosa. PlcH hydrolyzes phosphatidylcholine to diacylglycerol and phosphocholine, but unlike PlcN can also hydrolyze sphingomyelin to ceramide ((N-acylsphingosine)) and phosphocholine. Members of this family share the twin-arginine signal sequence for Sec-independent transport across the plasma membrane. PlcH is secreted as a heterodimer with a small chaperone, PlcR, encoded immediately downstream. [Cellular processes, Pathogenesis].	3.34187e-144
NZ_CP053452.1\|WP_171475375.1\|9093341_9094340_-\|ribonucleotide-diphosphate-reductase-subunit-beta	gnl\|CDD\|153108	cd01049, RNRR2, Ribonucleotide Reductase, R2/beta subunit, ferritin-like diiron-binding domain. Ribonucleotide Reductase, R2/beta subunit (RNRR2) is a member of a broad superfamily of ferritin-like diiron-carboxylate proteins. The RNR protein catalyzes the conversion of ribonucleotides to deoxyribonucleotides and is found in all eukaryotes, many prokaryotes, several viruses, and few archaea. The catalytically active form of RNR is a proposed alpha2-beta2 tetramer. The homodimeric alpha subunit (R1) contains the active site and redox active cysteines as well as the allosteric binding sites. The beta subunit (R2) contains a diiron cluster that, in its reduced state, reacts with dioxygen to form a stable tyrosyl radical and a diiron(III) cluster. This essential tyrosyl radical is proposed to generate a thiyl radical, located on a cysteine residue in the R1 active site that initiates ribonucleotide reduction. The beta subunit is composed of 10-13 helices, the 8 longest helices form an alpha-helical bundle; some have 2 addition beta strands. Yeast is unique in that it assembles both homodimers and heterodimers of RNRR2. The yeast heterodimer, Y2Y4, contains R2 (Y2) and a R2 homolog (Y4) that lacks the diiron center and is proposed to only assist in cofactor assembly, and perhaps stabilize R1 (Y1) in its active conformation.	1.08045e-103
NZ_CP053452.1\|WP_171475381.1\|9107951_9109109_+\|alpha-hydroxy-acid-oxidizing-protein	gnl\|CDD\|376451	pfam01070, FMN_dh, FMN-dependent dehydrogenase.	6.52971e-142
NZ_CP053452.1\|WP_171475377.1\|9098150_9101147_+\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|224511	COG1595, RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription].	2.59169e-29
NZ_CP053452.1\|WP_171475378.1\|9101909_9103655_-\|PQQ-binding-like-beta-propeller-repeat-protein	gnl\|CDD\|224437	COG1520, COG1520, FOG: WD40-like repeat [Function unknown].	2.17856e-13
NZ_CP053452.1\|WP_171475382.1\|9109258_9110311_+\|deoxyhypusine-synthase	gnl\|CDD\|235043	PRK02492, PRK02492, deoxyhypusine synthase.	0
NZ_CP053452.1\|WP_171475393.1\|9125738_9126959_+\|histidinol-phosphate-transaminase	gnl\|CDD\|235440	PRK05387, PRK05387, histidinol-phosphate aminotransferase; Provisional.	4.19327e-112
NZ_CP053452.1\|WP_171475387.1\|9118980_9119766_-\|DUF3859-domain-containing-protein	gnl\|CDD\|379007	pfam12975, DUF3859, Domain of unknown function (DUF3859). This short domain is functionally uncharacterized.	1.90138e-07
NZ_CP053452.1\|WP_171475379.1\|9103683_9106002_-\|PQQ-binding-like-beta-propeller-repeat-protein	gnl\|CDD\|379140	pfam13360, PQQ_2, PQQ-like domain. This domain contains several repeats of the PQQ repeat.	6.92745e-21
NZ_CP053452.1\|WP_171475392.1\|9124305_9125736_+\|histidinol-dehydrogenase	gnl\|CDD\|119329	cd06572, Histidinol_dh, Histidinol dehydrogenase, HisD, E.C 1.1.1.23. Histidinol dehydrogenase catalyzes the last two steps in the L-histidine biosynthesis pathway, which is conserved in bacteria, archaea, fungi, and plants. These last two steps are (i) the NAD-dependent oxidation of L-histidinol to L-histidinaldehyde, and (ii) the NAD-dependent oxidation of L-histidinaldehyde to L-histidine. In most fungi and in the unicellular choanoflagellate Monosiga bevicollis, the HisD domain is fused with units that catalyze the second and third biosynthesis steps in this same pathway.	0
NZ_CP053452.1\|WP_171475376.1\|9097330_9097744_-\|hypothetical-protein	gnl\|CDD\|235367	PRK05222, PRK05222, 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; Provisional.	1.27388e-11
NZ_CP053452.1\|WP_171476266.1\|9094512_9096822_-\|ribonucleoside-diphosphate-reductase-subunit-alpha	gnl\|CDD\|178056	PLN02437, PLN02437, ribonucleoside--diphosphate reductase large subunit.	0
NZ_CP053452.1\|WP_171475386.1\|9118051_9118456_-\|VOC-family-protein	gnl\|CDD\|366361	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.	5.23783e-11

>NZ_CP053452.1|WP_171475383.1|9110633_9113135_+|phospholipase-C,-phosphocholine-specific
MPTRREFIEFVAGTAGAGDAIGSLLGSIAQAASIEPERGSSFLDAEHVVILMQENRSFDHVFGTLRGVRGFNDPRALTLGDGNPVWVQANAEGKRYAPFRHDLKNSKITWMGSLPHDRTDQVDARNHGLYDRWLIAKESGRKEYKHLPLTLGYFTREDVPFYYALADAFTVCDQNFCSSLTATTPNRLHLWTGTVRAKPDAQSPAHVRNEDVDHDHLAGWTTFPERLEEWGVAWKVYQNELTVESGLNEEEDRWLSNFGDNPLEYFRQYHVHSAKNHCDFVARRLKQLPDEIQALEQQVATLTNAAEREKRNKQLDELRATQKKYDRERASWEQNRLEKLPERERALHAKAFCTNVADPAFRKLLDVTYRDGDNPRQMRVPKGDVLQNFRKDVGTGTLPTVSWLVSPETFSDHPSSAWFGAWYIAEVLDILTANPEVWKKTIFVVTYDENDGYFDHVPPFVPPHPHRPETGKVTKGIDAAVEYVELEQDRKVAGPSSARESAIGLGYRVPLIVASPWSRGGCVCSQVFDHTSVLQLLEKFLSHKLGKKVEEPNINRWRRAVCGDLTSAFQSPAKGDRPRLKFPPRNDFLQMIHNAKFKDLPIGPQALSAAELEKIRRDPKTSVLPRQEPGVRPSSPLPYELVVDGSLNATRTHFEVRFEARNDAFGDRSAGSAFIVYALVAPGEMRVRNYAVEPGAQLEDSWKLSDFDGGRYHLRVYGPNGFFREFKGSVKDPLVAIALDYCRSEKPAGKLSGSVRITSVNNERSATISLDVRTSDGPAAPTPLAPGQKKEITFESPKRDGWYDVVVRQGEFVKRYAGRVETGKWSTSDPAMA
>NZ_CP053452.1|WP_171475382.1|9109258_9110311_+|deoxyhypusine-synthase
MVTKSDYLHTPVEHIDVTQFNPVPLVEAMGRTAFTARDLARAADITHRMVADRDCGVILCLAGSLVSAGLKKVFADAVRCNMVDAIVSTGANIVDQDFFEGLGFRHWVGEEKLRSGMFDAELRDLHIDRIYDTLIDEDELRTCDDTTRVIADELEPRPHSSREYIRAMGAYLDKNGCKTPDSIVYEAYRADVPIFCPAFSDCSAGFGLVAHQHARGDGPKLSLDSAKDFYELTQLKIANPTTGLFMVGGGVPKNFAQDVVVAADVLGREVPMHKYAVQVTVADVRDGALSGSTLKEASSWGKVDLAFEQMVYSEATLAVPLLFGYAYHKGAWKARTGRRWNQVLETAAVP
>NZ_CP053452.1|WP_171475381.1|9107951_9109109_+|alpha-hydroxy-acid-oxidizing-protein
MNLSYHTSYPGIDDLRERARRRTPRFAFEYLDGGCNEDVNLHKNTNDLRQVELKPYYLTRHEPPVLKTELFGHEYDAPFGIAPIGLQGLIWPGAPEILARAAAEHNIPFILSTVTTASIEQIGKITGGRFWYQLYHPAEDAIRDDILNRLEAAGCKTLVLLCDVPTFGYRPRDIRNGLAMPPRMTLRNILQILGRPNWAVRTLLNGKPHFATMAKYMPKGLNMKQLGAYMNATFSGRLNEAKIAPIRDRWKGHLVLKGVASEEDAETAVRLGLDGLIVSNHGGRQVDAGESAIRSLLPIAAKYRGKIRVMIDSGLRSGPDIARALACDADFTFLGRTFMYAVAALGRDGGQHAIAMLKVQLKQVMDQLCCHRVADFPRHLLRKPG
>NZ_CP053452.1|WP_171475380.1|9106548_9107667_+|hypothetical-protein
MTVKPLDFGRLHVLPLAHRTSLTRADDILIDPDVEPKPCSERNAALVAACAERIRAARTRGAAVMLIYGAHLLRNGTARLLERMMAAGWLTHLATNGAGTIHDWEYAWLGASTESVELGVAGGQFGTWDETATNIHLALMAGALDGLGYGRALGRFIAEDGALLPHPDELRHRIATDPDDPLTAARADLLRAMREQGWRPGRVALEHRWKHASILAQAWRHGVPVTVHPGIGYDIISNHSVFSGSALGRAGEWDFKLFGGSVENLDGGVVLSVGSAIMGPQVFEKSISCVNNIRRRDDRGVVTGHSIFVVDLQDGGNWDWTTGEPPKTNPAYYLRFCKSYSRMGGAMHYLQCDNAAFVHHLYRDLSRQPGAG
>NZ_CP053452.1|WP_171475379.1|9103683_9106002_-|PQQ-binding-like-beta-propeller-repeat-protein
MPSVRMLALVLAVLALVARAPAARAADWIHWRGPMQNGHSLEKNLPGEFDPTKGKEGNVVWTAPYGGRCAPLVMDGRVYVIQGTGSGLEEAEQLVCVDEQNGKLHWSYRVNVFHTDIVSTRVAWAPLTGDPATGHVYAQTTGGELLCLDKAGKLVWKHSLTEEYGRASGYGGRLPAPIFDSGLVIVGMISSSWGDFSRGANRFVAFDGKTGEVVWWFDPGFPSKETYGSNPIVAVLNGQRVLLTGGGDGYLHAIKLRTGERIWSYQYCSGAANPAPLVSGNYVYAVHGDENPEGGPYGRIICLDASKIGTDGKPELVWEYRKSVRFGLTSPAIADGLLYAADDVGDLHCFNAKSGKELWKYRYANEVRGSPLIADGKLYINDVQRRMLILTLNGNSKPDEGDTFEFRFKEPKGIYSETNGTPIAVNGRVYFVSAASLWCLGLPNTKPEVVKYPSLPPETPYKDDAVAGARLFPADVVLKPSGKAKFQVVYVDANGREVKDTRPSPPATWALPLPAKTPTGAQPPALQGKIDNGELAVAPVPAQQGYVEFDGGGIKARARVRVAAQISWKQDFEKAPAGSSPGGWVNANGKFTVVKLADGNMVLMKNNNDPRPPLAKANTFITLPDSANYTIQADLMGTRVRDGMADFGIINSRYTLVLDGKTDPDSKKRQVRLFSWEARPRITRIEDFDWQPDVWYTAKLTIEQKEKTAIVRGKVWKRGDPEPEAWTVEFEDPSPNRVGSAGLYGYVTNSTATLTGANCYYDNIAITPNAKK
>NZ_CP053452.1|WP_171475378.1|9101909_9103655_-|PQQ-binding-like-beta-propeller-repeat-protein
MFSQEQTMTRVFRSRPARLAAFFALVAATALVADAAAPPESPPKSEGKVECSMFGGTVSRNMVNLTAKDIPGKFEPEDKSVLLWKADLGSKAYGGPTVAGGRVYVGTNNQRPRNADRDIHRSKAGVVEPVDMGVLMVFDEKTGKFLWQAVHDKLESGRVNDWPEEGVCATPTVEGDRVYYVSNRCTLMCLDAKGFSDGNQGFQGEKYKEKTDADIIWQYDMMKEHNVFPHNMSAGCPLIVGDTVFVHTANGVDDGHINLPSPNAPSFIALDKYTGKLKWKSSLPGKNIMHGQWSNAAYAEIDGIKQVIFPGGDGWIYSFVPETGELIWKFDGNPKDSVYELGGTGTRSDYIGTPVIYDNKVYIGLGQDPEHSTGISHFFCIAPKKEKVGKGADISKVLETRTKGADGKDVIGERPNPNSCVVWHFGGEENRKWASRDFKFGRTMSTACIVDDILYISELSGQLHCMNAQTGEHYWKYDTKASIWGSSYYVDGKVYLATDSGDLFVFKHDKKPSKHDELEGLTATDLKGARKEIKARQQQVADKYLIAKIEFDAPIRSTPVVANGVLFVMTEKTLYAFKQKN
>NZ_CP053452.1|WP_171475377.1|9098150_9101147_+|sigma-70-family-RNA-polymerase-sigma-factor
MMIYPPSPPRVAPDAELVRQFIAGNEAAFELLVWRYRGLVFDVCRRTLGHSHDAEDAAQAAFLVFAKKAESVRADHLAGWLARVAHRCALRVRGRRPAFAELPDVPAPPRPAVPLDGVLDAELDRLPEKYRRPIVLCYLHGLSYAEASEQLNCPTGTLCGWLTRGKELLRKRLARRGIEVPVGALAVYLSGLGRTASASHRLVRTITTAALNFVAGEPRPDPAAAIAHGVLQMMTLKRTAAFGLLGFFTTVVVAVAALLADDPRTADEPKVLAAEPEKPVAIERTIGKEPKYQGKPAYCLLVFDAGAKHRVWLVHDGDTLYVDKNGNGDLTDGGEQVAAKKQTADEEVDQVFEVGDVTVGGKTHKGLTVSTARLDRLVANNLLATIAPIEPTLKKDKAAVVYALQVESERPGVKGAGAGGRVQYRVGPFDANGVLRFAPTTAAAPVIHLGGRFELWSQFGEQILRPGRDSCLRMVVGAPGFGPGTLAFIPYDNTIPDDAHPVAEVTFPARPGEKPRTQAVPMNFRTCGYSIDARFTCGEETGSATVRFHFDAWKEGNVAPTTYRMAVQPPPKLTGPKAEPVSERLVATLPHPGPRAIPLARYSPDGKRLLVAGDMGSGVVQLWDVDGRKELLQIAGAKRVSSSKDPEPSFLAEEYALLSPDGKTLYVPTRGENVARVERGGKRADLIENLGRVRRWDLTTKKELDPYSPPTGWGNLMADLSPGGRFLYSIEHKDHLRDGDREARLVVWDTNTGERVALLKGHYGNVPVFLPGDRGIATTQLDKEGQVTVRVHSLPDGKEVVSKSHPCPEGRAARFVGASPDGKLLAVNLGGKKGETTTTLFLDAESLEETARWTAPANPTGFGYTPGRFAPNGKRFLAVDGENTLHIWDVAAKQVARTVKLDQSGWQSVVSGDGRWFATTWTPPDPNKFANQVQLDPESLPQPRAVLVDLNDPTAKPVTLVAPRGISWGMALRPDGKQLALGGSGGVHLFDLTTLGGK
>NZ_CP053452.1|WP_171475376.1|9097330_9097744_-|hypothetical-protein
MLHAQPLTQFPQDRPGPRVSPRYHDITREFLVDDLLFDGVERADLRRVCSFTNAFAAFRYTNKLGSGGVRHPLAVGVVAGGGGTVFRQGAALPGAEQLWVDPDRGLKTRKWDEMRPPLVAMIDAARALHARVPAGSV
>NZ_CP053452.1|WP_171476266.1|9094512_9096822_-|ribonucleoside-diphosphate-reductase-subunit-alpha
MKVRKRNGTLEDVNVNKIVRAVQRCAGGLPGVDPMRVAVKTIGGLYDGATTAELDRLSIQTAAGLIAEEPEYSRLAARLLATYIDKEVTNQDVHSFSQSVAAGYRHGLVAEGTVAFVAASARKLNAAAAEPHPDLFEYFGLRTVYDRYLLRHPETRHVIETPAFFFLRVACGLAESAADAIELFRLMSAHRYLPSTPTLFNSGTARPQMSSCYLLDSPADDLEAIYDRYADVAKLSKFAGGIGLAYHRVRSRGSLIRGTNGHSNGIVPWLKTLDSSVAAVNQGGKRKGACCVYLETWHADVEEFLELRDNTGDPARRAYNLNLANWVPDLFMRRVEAGGAWSLFDPKAVPYLTDLFGDAFDAAYAEAEARGLAVKTVPARDLYARMMKTLAETGNGWMTFKDACNRTCNQTGAARAVVHSSNLCTEIVEVTAAGETAVCNLGSVNLARHVTAAGFDFAALAETVRTAVRFLDRVIDVNFYPTPAAAASNARWRPVGLGVMGLQDVFFKLKLPFDAPAARALSQRIQEEIYYHALATSCALAALHGPHPAFAETRAAGGVLQFDLWGVTPVEAARWDALRERVRTTGLRNSLLVAIAPTATIASIVGAYECTEPQVSNLFKRETLSGEFLQMNRYLVDDLKALGLWTDAVRAKIKLADGSVQGLEELPAHLRAVYRTAWEVPMRALIDMAAGRGPFIDQSQSLNLFLESPTIGKMSSMYMYAWKRGLKTTYYLRSRPATAIAKTTVSKAAPDAAAVTCSLENPSACEACQ
>NZ_CP053452.1|WP_171475375.1|9093341_9094340_-|ribonucleotide-diphosphate-reductase-subunit-beta
MLLDPGMSLTLRPMRYPDFFEMYKDAIKNTWTVDEVDFSTDLTDLRTRVTPAERHLIHRLVAFFATGDSIVGNNLVLNLYKHVNAPEARMYLSRQLYEEALHVQFYLTLLDNYLPDMSEREAAFAAVDNIPSIKLKADFCFKWIDSVDGLDRLETRADRRAFLLNVVCFAACIEGLFFFAAFAYVYFLRSKGLLHGLATGTNWVFRDESAHMAFAFRVIDTVRREDPDLFDAELDAQIVAMLREAVECETTFARDVLGMGVAGLSLTDLRAYLEYVADRRLEALGIAPVFGAKNPFDFMDLQDVQELTNFFERRVSAYQLGVTGAVAFGEEF
>NZ_CP053452.1|WP_171475384.1|9115336_9117040_+|FAD-dependent-oxidoreductase
MNRRAFLSLSAVTPLAHLLPAYGQQTKDRELKADVVVVGAGVGGVACALAAARNGLKVILTEEYEWIGGQLTSQAVPPDEHPWIEERGSTRTYRAFRTRVRDYYRRNYPLTEAAAKLPDLNPGAGNVSRLCHEPRVALAVLLEMLAPHLTSGRVKLVQPFRPRAVETDGDTITAVLGHTRFTERLVLLAPYFVDATEAGDLLPLGKVEYVTGAEAREDTTEPHAADRARPSNHQAFTVCFAMDHEADKDNTIERPAGYKRWRDYEPKLEPAWPGPLLSWEMPDPVTLKKRVVAFDPVNPVEKGMNPWTYRRILAKSHLADGSGAGDVCLVNWPQNDYWLGNLYDNGRDASGHFAAARELSLCLLYWMQTEAPHPGGRKQGWKGLRLRGDVTGTEDGDGLAMAPYYRESRRIRAVFTVTENHVGVDARAKLLGKKPREFAAEEFPDTVGTGSYRIDLHPSSGGDNYIDVSSLPFQIPLGALIPQRVENLLPACKNIGTTHVTNGCYRMHPVEWSVGEAVGELVAFCTTKKRVPRQVRKDAKLLADYQAQLAKAGSDMHWPADIAMRAR
>NZ_CP053452.1|WP_171475385.1|9117196_9117793_-|hypothetical-protein
MAVWKIIGIGCGVVVALGVAVTVAALVFVPRLFDFAQKKLAEEQERQAIAAAWDAPDRGAAPAQVFPLMVKGYRLDRADDRADVPELNLDVKGAHAVYSAGASRVEVFAYPVSKLEAEALMARAERAYEQDGERGVREFTSVDIEDSYGRVYLSAPGLGQSHLWFTKGWLLVFRTPDAEDREAFVREFLRTPRRQGGV
>NZ_CP053452.1|WP_171475386.1|9118051_9118456_-|VOC-family-protein
MARVTGIGGVFFKSNDPAALAAWYQKHLGMVLEKSFGGAILRWPDDRAEDKGLTVWHLADKGSQWFSPSDSSFMINYRVDDLGELLAGLRANGVEVLKGPESHENGRFAWVMDPDGNKVELWEPKIWNEKNKTD
>NZ_CP053452.1|WP_171475387.1|9118980_9119766_-|DUF3859-domain-containing-protein
MFAAFDWNEVITKALMGGVLGGIGGGVYGLFAFLTRKSDAQQQAEFEARERSRIHAQMHRKAKKPGPSPGLLGLVLLLMVPVIVVVCTLVVNPSLVTRPPRGGEDGSGIAAPSGTGKPRATIYEYGRYRAQSPVRGVPARDTSGNASAGREKDVVLLEQTEQIFCQAGESWGVRIRCSDFPVNRPYTVRQETYHPPINRPDGSVLTKSVHEFHVPQGEAPNPFYGWHFLKDHEYELVAGVWSILVFIDDVEVARKSFIIRK
>NZ_CP053452.1|WP_171475388.1|9119988_9120471_-|hypothetical-protein
MNRVRWCAVVISLTFTSMILAQKPDNKLPDAVVKALEKADALEVYSLGGQTTEVNGWHGAKVLGQTKVKSAADLTSMTAALKKGVADGDGGARCFIPRHGVRVAHAGKTYDFLICFECHWVYVFTDNSDKPLVLMIADAPQKAFNKLLTDAAVPLAPPKK
>NZ_CP053452.1|WP_171475389.1|9120552_9121290_-|hypothetical-protein
MPKLNQINALVTSRKGDAEKQITELYKLIQKEQLFAGRERTYRPLDEVNGQKLPPESQRVQQRADDLVRQAREKWTELWNLVLTQDTGNQSARADIVVDGKVILANVPVTSLLFLDKQVNDLETFVSKLPTPDPAEEWTHDPSTGLLRGKTTESLRTSKEPTVIVKYEATKEHPAQTELFTKDVPVGTWSQILYSGCIGTDRKNAILTRVRKLQDAIKLAREQANLLEVERQKAGEPLLGFVFGE
>NZ_CP053452.1|WP_171475390.1|9121509_9122115_-|DUF479-domain-containing-protein
MNFLAHLHLADGDAGDMTGGVAADFVRYPDLHRLTPDVLRGVMLHRHIDGFTDRHPVTLRSISRVARTMGWFGGIVIDIYYDHILARDWLRYSAEPLAAFAARSYRVLEDGHGQLPEDARDFIRKFIDQDRLNRYASRDGIEDTLARVSKVIAKRIPNRAIPLTDAMPRLIECDAELAADFHAFYPELIAFVIQHKSERPV
>NZ_CP053452.1|WP_171475391.1|9122396_9123695_-|PP2C-family-protein-serine/threonine-phosphatase
MTVAPDFFETEPRNWRARLAVSVEVMRELSRVTDPQEMYAIFARRMAQLFPVSRHLTLSRRGLRHPDYRVARFSMWKDPVNPWKESHRLPVHHGGLLAELLYGDQPRIIDNLVVDPDDPAAEYLAGQRSLLAVPHYDNGVSQNMLVLTREDTESFPRERVADLVLLSNLFTRATQTVVLSQAVKEAYDGLDYELRSIAEIQKSLLPAEKPKVPGLDVAVHYQTAKRAGGDYYDFFPLPNDRLGVLIADASGHGAPAAVLMAVAHSIAHTRVEHPQRPGEFLTYMNAHLTRRYTRPTGSFMTAFYAVFDPMNATLSYASAGHNPPRLLRCADGFKLALNRAQKLPLGIKPDEVYLEQTVPLLPGDQVVFFTDGVIEAVNTDGDVFGSARIDEELATCLPTAAALLRAILATHTLFTAGTTPADDRTLVVVKRL
>NZ_CP053452.1|WP_171475392.1|9124305_9125736_+|histidinol-dehydrogenase
MPVLKLRRIDLTASNAAAQIIKLRDQFRTDSEVVSAASKKKTQAVFGEALPPVRAVERICTDVRDKGLSAVLHYTELFDGVKLKADQIRVKPAELAEAHAKVGDDFLEVIRQIRYNVLQFQSGLLHCDAEMRVSGKHELQVRYRPLKRVGVYCPGGAAAYPSTLLMTVCPAQAAGCEQIVVCMPPNDKGAYNREMLATCHELGITEVYRFGGAQAIAAMAYGVEGMKPVDIIVGPGNQYVALAKKYVFGQVAIDCIAGPSEIVVLADDSAHPDYVALDLIAQAEHSPGVAVLVTWYEPLINEVQVALEKRLAKLSRADLARDSLERYGALVLAPTKAAAIDCVNAIAPEHLHIQTRDPDALVDDIDNAGAVFLGPFTPVAVGDYAAGPSHVLPTGGTSRFASGLNVNDFRKRTSILRFTRQGLKDISEDVVYLANKEGLTGHAASVELRANDNGPAARPKPKPDKVPAAAAPIAKK
>NZ_CP053452.1|WP_171475393.1|9125738_9126959_+|histidinol-phosphate-transaminase
MTGEEPTPNPSLQGGEHDLRDSVTSKSSVEATRAVTAFSSGKGDGGLGGIETVRPNIRAMAGYVPGEQLNDPDIIKLNTNESPYPPSPRVFDALRAALTSNSLRKYPQPFGDTFRNAAGRVLNVDPDSILIGNGSDDILTILTRAFVPEGGLIASPAPSYILYKSLAEIQGARFHAIPFTHDWRTDRDSWPRGASLSFVPNPNSPTGTVLDPIDVLRLSKRVSPNPLVVDEAYADFAEPPGYVPLVADWDNLIVTRTFSKSYALAGIRFGFAVARPELVRELLKVKDSYNCDVLSLAAATAAIEDQDYFREVRTKIIATRARMTRELAALGFEVTPSHANFVWCRRADKPLKPIYEELKRQKILVRYMNYPVGPIGSPPGAYDGLRMSVGTDAEIDRLLEELRGIV

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Crispr_ID: NZ_CP053452_34

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053452_34

9114408-9114648

Orphan

Consensus_repeat	Method
CGTGACGGACGCGGGGCTGAAGGA	CRISPRCasFinder

3 spacers

The CRISPR arrays of NZ_CP053452_34

>merge|NZ_CP053452|34|9114408-9114648|CRISPRCasFinder
TGTGTCGGACACCATGCTGAAGGAACTCGCTCGGTTGCCGGAGTTGCGCGCGTTGTCCCTTCGCCAGACGAGCGTATCGGACGCCGGCCTGAAGGCGCTGGCCCCCCTAAAGACCCTTCGGAGCCTCGACCTGAGTCACCTGCAGGTATCGGATGCCGGTTTGAAGGACCTCGCGGCGTTCCCGGGTCTGACGACTCTCGGGCTGCTCGGCACGCCGATCACGGACGCCGGGCTAAAGGAG

>NZ_CP053452|34|33|9114408-9114648|CRISPRCasFinder
TGTGTCGGACACCATGCTGAAGGA	ACTCGCTCGGTTGCCGGAGTTGCGCGCGTTGTCCCTTCGCCAGACGAG
CGTATCGGACGCCGGCCTGAAGGC	GCTGGCCCCCCTAAAGACCCTTCGGAGCCTCGACCTGAGTCACCTGCA
GGTATCGGATGCCGGTTTGAAGGA	CCTCGCGGCGTTCCCGGGTCTGACGACTCTCGGGCTGCTCGGCACGCC
GATCACGGACGCCGGGCTAAAGGAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053452.1\|WP_171475384.1\|9115336_9117040_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|378963
NZ_CP053452.1\|WP_171475391.1\|9122396_9123695_-\|PP2C-family-protein-serine/threonine-phosphatase	unknown	unknown	gnl\|CDD\|225118
NZ_CP053452.1\|WP_171475380.1\|9106548_9107667_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171475388.1\|9119988_9120471_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171475390.1\|9121509_9122115_-\|DUF479-domain-containing-protein	unknown	unknown	gnl\|CDD\|377311
NZ_CP053452.1\|WP_171475383.1\|9110633_9113135_+\|phospholipase-C,-phosphocholine-specific	unknown	unknown	gnl\|CDD\|274561
NZ_CP053452.1\|WP_171475375.1\|9093341_9094340_-\|ribonucleotide-diphosphate-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|153108
NZ_CP053452.1\|WP_171475381.1\|9107951_9109109_+\|alpha-hydroxy-acid-oxidizing-protein	unknown	unknown	gnl\|CDD\|376451
NZ_CP053452.1\|WP_171475377.1\|9098150_9101147_+\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|224511
NZ_CP053452.1\|WP_171475378.1\|9101909_9103655_-\|PQQ-binding-like-beta-propeller-repeat-protein	unknown	unknown	gnl\|CDD\|224437
NZ_CP053452.1\|WP_171475382.1\|9109258_9110311_+\|deoxyhypusine-synthase	unknown	unknown	gnl\|CDD\|235043
NZ_CP053452.1\|WP_171475393.1\|9125738_9126959_+\|histidinol-phosphate-transaminase	unknown	unknown	gnl\|CDD\|235440
NZ_CP053452.1\|WP_171475387.1\|9118980_9119766_-\|DUF3859-domain-containing-protein	unknown	unknown	gnl\|CDD\|379007
NZ_CP053452.1\|WP_171475379.1\|9103683_9106002_-\|PQQ-binding-like-beta-propeller-repeat-protein	unknown	unknown	gnl\|CDD\|379140
NZ_CP053452.1\|WP_171475389.1\|9120552_9121290_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171475392.1\|9124305_9125736_+\|histidinol-dehydrogenase	unknown	unknown	gnl\|CDD\|119329
NZ_CP053452.1\|WP_171475385.1\|9117196_9117793_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171475376.1\|9097330_9097744_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235367
NZ_CP053452.1\|WP_171476266.1\|9094512_9096822_-\|ribonucleoside-diphosphate-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|178056
NZ_CP053452.1\|WP_171475386.1\|9118051_9118456_-\|VOC-family-protein	unknown	unknown	gnl\|CDD\|366361

Protein	Function_ID	Function_description	E-value
NZ_CP053452.1\|WP_171475384.1\|9115336_9117040_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|378963	pfam12831, FAD_oxidored, FAD dependent oxidoreductase. This family of proteins contains FAD dependent oxidoreductases and related proteins.	1.35483e-109
NZ_CP053452.1\|WP_171475391.1\|9122396_9123695_-\|PP2C-family-protein-serine/threonine-phosphatase	gnl\|CDD\|225118	COG2208, RsbU, Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription].	3.57431e-48
NZ_CP053452.1\|WP_171475390.1\|9121509_9122115_-\|DUF479-domain-containing-protein	gnl\|CDD\|377311	pfam04336, ACP_PD, Acyl carrier protein phosphodiesterase. YajB, now renamed acpH, encodes an ACP hydrolase that converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP.	2.01388e-34
NZ_CP053452.1\|WP_171475383.1\|9110633_9113135_+\|phospholipase-C,-phosphocholine-specific	gnl\|CDD\|274561	TIGR03396, PC_PLC, phospholipase C, phosphocholine-specific, Pseudomonas-type. Members of this protein family are bacterial, phosphatidylcholine-hydrolyzing phospholipase C enzymes, with a characteristic domain architecture as found in hemolytyic (PlcH) and nonhemolytic (PlcN) secreted enzymes of Pseudomonas aeruginosa. PlcH hydrolyzes phosphatidylcholine to diacylglycerol and phosphocholine, but unlike PlcN can also hydrolyze sphingomyelin to ceramide ((N-acylsphingosine)) and phosphocholine. Members of this family share the twin-arginine signal sequence for Sec-independent transport across the plasma membrane. PlcH is secreted as a heterodimer with a small chaperone, PlcR, encoded immediately downstream. [Cellular processes, Pathogenesis].	3.34187e-144
NZ_CP053452.1\|WP_171475375.1\|9093341_9094340_-\|ribonucleotide-diphosphate-reductase-subunit-beta	gnl\|CDD\|153108	cd01049, RNRR2, Ribonucleotide Reductase, R2/beta subunit, ferritin-like diiron-binding domain. Ribonucleotide Reductase, R2/beta subunit (RNRR2) is a member of a broad superfamily of ferritin-like diiron-carboxylate proteins. The RNR protein catalyzes the conversion of ribonucleotides to deoxyribonucleotides and is found in all eukaryotes, many prokaryotes, several viruses, and few archaea. The catalytically active form of RNR is a proposed alpha2-beta2 tetramer. The homodimeric alpha subunit (R1) contains the active site and redox active cysteines as well as the allosteric binding sites. The beta subunit (R2) contains a diiron cluster that, in its reduced state, reacts with dioxygen to form a stable tyrosyl radical and a diiron(III) cluster. This essential tyrosyl radical is proposed to generate a thiyl radical, located on a cysteine residue in the R1 active site that initiates ribonucleotide reduction. The beta subunit is composed of 10-13 helices, the 8 longest helices form an alpha-helical bundle; some have 2 addition beta strands. Yeast is unique in that it assembles both homodimers and heterodimers of RNRR2. The yeast heterodimer, Y2Y4, contains R2 (Y2) and a R2 homolog (Y4) that lacks the diiron center and is proposed to only assist in cofactor assembly, and perhaps stabilize R1 (Y1) in its active conformation.	1.08045e-103
NZ_CP053452.1\|WP_171475381.1\|9107951_9109109_+\|alpha-hydroxy-acid-oxidizing-protein	gnl\|CDD\|376451	pfam01070, FMN_dh, FMN-dependent dehydrogenase.	6.52971e-142
NZ_CP053452.1\|WP_171475377.1\|9098150_9101147_+\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|224511	COG1595, RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription].	2.59169e-29
NZ_CP053452.1\|WP_171475378.1\|9101909_9103655_-\|PQQ-binding-like-beta-propeller-repeat-protein	gnl\|CDD\|224437	COG1520, COG1520, FOG: WD40-like repeat [Function unknown].	2.17856e-13
NZ_CP053452.1\|WP_171475382.1\|9109258_9110311_+\|deoxyhypusine-synthase	gnl\|CDD\|235043	PRK02492, PRK02492, deoxyhypusine synthase.	0
NZ_CP053452.1\|WP_171475393.1\|9125738_9126959_+\|histidinol-phosphate-transaminase	gnl\|CDD\|235440	PRK05387, PRK05387, histidinol-phosphate aminotransferase; Provisional.	4.19327e-112
NZ_CP053452.1\|WP_171475387.1\|9118980_9119766_-\|DUF3859-domain-containing-protein	gnl\|CDD\|379007	pfam12975, DUF3859, Domain of unknown function (DUF3859). This short domain is functionally uncharacterized.	1.90138e-07
NZ_CP053452.1\|WP_171475379.1\|9103683_9106002_-\|PQQ-binding-like-beta-propeller-repeat-protein	gnl\|CDD\|379140	pfam13360, PQQ_2, PQQ-like domain. This domain contains several repeats of the PQQ repeat.	6.92745e-21
NZ_CP053452.1\|WP_171475392.1\|9124305_9125736_+\|histidinol-dehydrogenase	gnl\|CDD\|119329	cd06572, Histidinol_dh, Histidinol dehydrogenase, HisD, E.C 1.1.1.23. Histidinol dehydrogenase catalyzes the last two steps in the L-histidine biosynthesis pathway, which is conserved in bacteria, archaea, fungi, and plants. These last two steps are (i) the NAD-dependent oxidation of L-histidinol to L-histidinaldehyde, and (ii) the NAD-dependent oxidation of L-histidinaldehyde to L-histidine. In most fungi and in the unicellular choanoflagellate Monosiga bevicollis, the HisD domain is fused with units that catalyze the second and third biosynthesis steps in this same pathway.	0
NZ_CP053452.1\|WP_171475376.1\|9097330_9097744_-\|hypothetical-protein	gnl\|CDD\|235367	PRK05222, PRK05222, 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; Provisional.	1.27388e-11
NZ_CP053452.1\|WP_171476266.1\|9094512_9096822_-\|ribonucleoside-diphosphate-reductase-subunit-alpha	gnl\|CDD\|178056	PLN02437, PLN02437, ribonucleoside--diphosphate reductase large subunit.	0
NZ_CP053452.1\|WP_171475386.1\|9118051_9118456_-\|VOC-family-protein	gnl\|CDD\|366361	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.	5.23783e-11

>NZ_CP053452.1|WP_171475383.1|9110633_9113135_+|phospholipase-C,-phosphocholine-specific
MPTRREFIEFVAGTAGAGDAIGSLLGSIAQAASIEPERGSSFLDAEHVVILMQENRSFDHVFGTLRGVRGFNDPRALTLGDGNPVWVQANAEGKRYAPFRHDLKNSKITWMGSLPHDRTDQVDARNHGLYDRWLIAKESGRKEYKHLPLTLGYFTREDVPFYYALADAFTVCDQNFCSSLTATTPNRLHLWTGTVRAKPDAQSPAHVRNEDVDHDHLAGWTTFPERLEEWGVAWKVYQNELTVESGLNEEEDRWLSNFGDNPLEYFRQYHVHSAKNHCDFVARRLKQLPDEIQALEQQVATLTNAAEREKRNKQLDELRATQKKYDRERASWEQNRLEKLPERERALHAKAFCTNVADPAFRKLLDVTYRDGDNPRQMRVPKGDVLQNFRKDVGTGTLPTVSWLVSPETFSDHPSSAWFGAWYIAEVLDILTANPEVWKKTIFVVTYDENDGYFDHVPPFVPPHPHRPETGKVTKGIDAAVEYVELEQDRKVAGPSSARESAIGLGYRVPLIVASPWSRGGCVCSQVFDHTSVLQLLEKFLSHKLGKKVEEPNINRWRRAVCGDLTSAFQSPAKGDRPRLKFPPRNDFLQMIHNAKFKDLPIGPQALSAAELEKIRRDPKTSVLPRQEPGVRPSSPLPYELVVDGSLNATRTHFEVRFEARNDAFGDRSAGSAFIVYALVAPGEMRVRNYAVEPGAQLEDSWKLSDFDGGRYHLRVYGPNGFFREFKGSVKDPLVAIALDYCRSEKPAGKLSGSVRITSVNNERSATISLDVRTSDGPAAPTPLAPGQKKEITFESPKRDGWYDVVVRQGEFVKRYAGRVETGKWSTSDPAMA
>NZ_CP053452.1|WP_171475382.1|9109258_9110311_+|deoxyhypusine-synthase
MVTKSDYLHTPVEHIDVTQFNPVPLVEAMGRTAFTARDLARAADITHRMVADRDCGVILCLAGSLVSAGLKKVFADAVRCNMVDAIVSTGANIVDQDFFEGLGFRHWVGEEKLRSGMFDAELRDLHIDRIYDTLIDEDELRTCDDTTRVIADELEPRPHSSREYIRAMGAYLDKNGCKTPDSIVYEAYRADVPIFCPAFSDCSAGFGLVAHQHARGDGPKLSLDSAKDFYELTQLKIANPTTGLFMVGGGVPKNFAQDVVVAADVLGREVPMHKYAVQVTVADVRDGALSGSTLKEASSWGKVDLAFEQMVYSEATLAVPLLFGYAYHKGAWKARTGRRWNQVLETAAVP
>NZ_CP053452.1|WP_171475381.1|9107951_9109109_+|alpha-hydroxy-acid-oxidizing-protein
MNLSYHTSYPGIDDLRERARRRTPRFAFEYLDGGCNEDVNLHKNTNDLRQVELKPYYLTRHEPPVLKTELFGHEYDAPFGIAPIGLQGLIWPGAPEILARAAAEHNIPFILSTVTTASIEQIGKITGGRFWYQLYHPAEDAIRDDILNRLEAAGCKTLVLLCDVPTFGYRPRDIRNGLAMPPRMTLRNILQILGRPNWAVRTLLNGKPHFATMAKYMPKGLNMKQLGAYMNATFSGRLNEAKIAPIRDRWKGHLVLKGVASEEDAETAVRLGLDGLIVSNHGGRQVDAGESAIRSLLPIAAKYRGKIRVMIDSGLRSGPDIARALACDADFTFLGRTFMYAVAALGRDGGQHAIAMLKVQLKQVMDQLCCHRVADFPRHLLRKPG
>NZ_CP053452.1|WP_171475380.1|9106548_9107667_+|hypothetical-protein
MTVKPLDFGRLHVLPLAHRTSLTRADDILIDPDVEPKPCSERNAALVAACAERIRAARTRGAAVMLIYGAHLLRNGTARLLERMMAAGWLTHLATNGAGTIHDWEYAWLGASTESVELGVAGGQFGTWDETATNIHLALMAGALDGLGYGRALGRFIAEDGALLPHPDELRHRIATDPDDPLTAARADLLRAMREQGWRPGRVALEHRWKHASILAQAWRHGVPVTVHPGIGYDIISNHSVFSGSALGRAGEWDFKLFGGSVENLDGGVVLSVGSAIMGPQVFEKSISCVNNIRRRDDRGVVTGHSIFVVDLQDGGNWDWTTGEPPKTNPAYYLRFCKSYSRMGGAMHYLQCDNAAFVHHLYRDLSRQPGAG
>NZ_CP053452.1|WP_171475379.1|9103683_9106002_-|PQQ-binding-like-beta-propeller-repeat-protein
MPSVRMLALVLAVLALVARAPAARAADWIHWRGPMQNGHSLEKNLPGEFDPTKGKEGNVVWTAPYGGRCAPLVMDGRVYVIQGTGSGLEEAEQLVCVDEQNGKLHWSYRVNVFHTDIVSTRVAWAPLTGDPATGHVYAQTTGGELLCLDKAGKLVWKHSLTEEYGRASGYGGRLPAPIFDSGLVIVGMISSSWGDFSRGANRFVAFDGKTGEVVWWFDPGFPSKETYGSNPIVAVLNGQRVLLTGGGDGYLHAIKLRTGERIWSYQYCSGAANPAPLVSGNYVYAVHGDENPEGGPYGRIICLDASKIGTDGKPELVWEYRKSVRFGLTSPAIADGLLYAADDVGDLHCFNAKSGKELWKYRYANEVRGSPLIADGKLYINDVQRRMLILTLNGNSKPDEGDTFEFRFKEPKGIYSETNGTPIAVNGRVYFVSAASLWCLGLPNTKPEVVKYPSLPPETPYKDDAVAGARLFPADVVLKPSGKAKFQVVYVDANGREVKDTRPSPPATWALPLPAKTPTGAQPPALQGKIDNGELAVAPVPAQQGYVEFDGGGIKARARVRVAAQISWKQDFEKAPAGSSPGGWVNANGKFTVVKLADGNMVLMKNNNDPRPPLAKANTFITLPDSANYTIQADLMGTRVRDGMADFGIINSRYTLVLDGKTDPDSKKRQVRLFSWEARPRITRIEDFDWQPDVWYTAKLTIEQKEKTAIVRGKVWKRGDPEPEAWTVEFEDPSPNRVGSAGLYGYVTNSTATLTGANCYYDNIAITPNAKK
>NZ_CP053452.1|WP_171475378.1|9101909_9103655_-|PQQ-binding-like-beta-propeller-repeat-protein
MFSQEQTMTRVFRSRPARLAAFFALVAATALVADAAAPPESPPKSEGKVECSMFGGTVSRNMVNLTAKDIPGKFEPEDKSVLLWKADLGSKAYGGPTVAGGRVYVGTNNQRPRNADRDIHRSKAGVVEPVDMGVLMVFDEKTGKFLWQAVHDKLESGRVNDWPEEGVCATPTVEGDRVYYVSNRCTLMCLDAKGFSDGNQGFQGEKYKEKTDADIIWQYDMMKEHNVFPHNMSAGCPLIVGDTVFVHTANGVDDGHINLPSPNAPSFIALDKYTGKLKWKSSLPGKNIMHGQWSNAAYAEIDGIKQVIFPGGDGWIYSFVPETGELIWKFDGNPKDSVYELGGTGTRSDYIGTPVIYDNKVYIGLGQDPEHSTGISHFFCIAPKKEKVGKGADISKVLETRTKGADGKDVIGERPNPNSCVVWHFGGEENRKWASRDFKFGRTMSTACIVDDILYISELSGQLHCMNAQTGEHYWKYDTKASIWGSSYYVDGKVYLATDSGDLFVFKHDKKPSKHDELEGLTATDLKGARKEIKARQQQVADKYLIAKIEFDAPIRSTPVVANGVLFVMTEKTLYAFKQKN
>NZ_CP053452.1|WP_171475377.1|9098150_9101147_+|sigma-70-family-RNA-polymerase-sigma-factor
MMIYPPSPPRVAPDAELVRQFIAGNEAAFELLVWRYRGLVFDVCRRTLGHSHDAEDAAQAAFLVFAKKAESVRADHLAGWLARVAHRCALRVRGRRPAFAELPDVPAPPRPAVPLDGVLDAELDRLPEKYRRPIVLCYLHGLSYAEASEQLNCPTGTLCGWLTRGKELLRKRLARRGIEVPVGALAVYLSGLGRTASASHRLVRTITTAALNFVAGEPRPDPAAAIAHGVLQMMTLKRTAAFGLLGFFTTVVVAVAALLADDPRTADEPKVLAAEPEKPVAIERTIGKEPKYQGKPAYCLLVFDAGAKHRVWLVHDGDTLYVDKNGNGDLTDGGEQVAAKKQTADEEVDQVFEVGDVTVGGKTHKGLTVSTARLDRLVANNLLATIAPIEPTLKKDKAAVVYALQVESERPGVKGAGAGGRVQYRVGPFDANGVLRFAPTTAAAPVIHLGGRFELWSQFGEQILRPGRDSCLRMVVGAPGFGPGTLAFIPYDNTIPDDAHPVAEVTFPARPGEKPRTQAVPMNFRTCGYSIDARFTCGEETGSATVRFHFDAWKEGNVAPTTYRMAVQPPPKLTGPKAEPVSERLVATLPHPGPRAIPLARYSPDGKRLLVAGDMGSGVVQLWDVDGRKELLQIAGAKRVSSSKDPEPSFLAEEYALLSPDGKTLYVPTRGENVARVERGGKRADLIENLGRVRRWDLTTKKELDPYSPPTGWGNLMADLSPGGRFLYSIEHKDHLRDGDREARLVVWDTNTGERVALLKGHYGNVPVFLPGDRGIATTQLDKEGQVTVRVHSLPDGKEVVSKSHPCPEGRAARFVGASPDGKLLAVNLGGKKGETTTTLFLDAESLEETARWTAPANPTGFGYTPGRFAPNGKRFLAVDGENTLHIWDVAAKQVARTVKLDQSGWQSVVSGDGRWFATTWTPPDPNKFANQVQLDPESLPQPRAVLVDLNDPTAKPVTLVAPRGISWGMALRPDGKQLALGGSGGVHLFDLTTLGGK
>NZ_CP053452.1|WP_171475376.1|9097330_9097744_-|hypothetical-protein
MLHAQPLTQFPQDRPGPRVSPRYHDITREFLVDDLLFDGVERADLRRVCSFTNAFAAFRYTNKLGSGGVRHPLAVGVVAGGGGTVFRQGAALPGAEQLWVDPDRGLKTRKWDEMRPPLVAMIDAARALHARVPAGSV
>NZ_CP053452.1|WP_171476266.1|9094512_9096822_-|ribonucleoside-diphosphate-reductase-subunit-alpha
MKVRKRNGTLEDVNVNKIVRAVQRCAGGLPGVDPMRVAVKTIGGLYDGATTAELDRLSIQTAAGLIAEEPEYSRLAARLLATYIDKEVTNQDVHSFSQSVAAGYRHGLVAEGTVAFVAASARKLNAAAAEPHPDLFEYFGLRTVYDRYLLRHPETRHVIETPAFFFLRVACGLAESAADAIELFRLMSAHRYLPSTPTLFNSGTARPQMSSCYLLDSPADDLEAIYDRYADVAKLSKFAGGIGLAYHRVRSRGSLIRGTNGHSNGIVPWLKTLDSSVAAVNQGGKRKGACCVYLETWHADVEEFLELRDNTGDPARRAYNLNLANWVPDLFMRRVEAGGAWSLFDPKAVPYLTDLFGDAFDAAYAEAEARGLAVKTVPARDLYARMMKTLAETGNGWMTFKDACNRTCNQTGAARAVVHSSNLCTEIVEVTAAGETAVCNLGSVNLARHVTAAGFDFAALAETVRTAVRFLDRVIDVNFYPTPAAAASNARWRPVGLGVMGLQDVFFKLKLPFDAPAARALSQRIQEEIYYHALATSCALAALHGPHPAFAETRAAGGVLQFDLWGVTPVEAARWDALRERVRTTGLRNSLLVAIAPTATIASIVGAYECTEPQVSNLFKRETLSGEFLQMNRYLVDDLKALGLWTDAVRAKIKLADGSVQGLEELPAHLRAVYRTAWEVPMRALIDMAAGRGPFIDQSQSLNLFLESPTIGKMSSMYMYAWKRGLKTTYYLRSRPATAIAKTTVSKAAPDAAAVTCSLENPSACEACQ
>NZ_CP053452.1|WP_171475375.1|9093341_9094340_-|ribonucleotide-diphosphate-reductase-subunit-beta
MLLDPGMSLTLRPMRYPDFFEMYKDAIKNTWTVDEVDFSTDLTDLRTRVTPAERHLIHRLVAFFATGDSIVGNNLVLNLYKHVNAPEARMYLSRQLYEEALHVQFYLTLLDNYLPDMSEREAAFAAVDNIPSIKLKADFCFKWIDSVDGLDRLETRADRRAFLLNVVCFAACIEGLFFFAAFAYVYFLRSKGLLHGLATGTNWVFRDESAHMAFAFRVIDTVRREDPDLFDAELDAQIVAMLREAVECETTFARDVLGMGVAGLSLTDLRAYLEYVADRRLEALGIAPVFGAKNPFDFMDLQDVQELTNFFERRVSAYQLGVTGAVAFGEEF
>NZ_CP053452.1|WP_171475384.1|9115336_9117040_+|FAD-dependent-oxidoreductase
MNRRAFLSLSAVTPLAHLLPAYGQQTKDRELKADVVVVGAGVGGVACALAAARNGLKVILTEEYEWIGGQLTSQAVPPDEHPWIEERGSTRTYRAFRTRVRDYYRRNYPLTEAAAKLPDLNPGAGNVSRLCHEPRVALAVLLEMLAPHLTSGRVKLVQPFRPRAVETDGDTITAVLGHTRFTERLVLLAPYFVDATEAGDLLPLGKVEYVTGAEAREDTTEPHAADRARPSNHQAFTVCFAMDHEADKDNTIERPAGYKRWRDYEPKLEPAWPGPLLSWEMPDPVTLKKRVVAFDPVNPVEKGMNPWTYRRILAKSHLADGSGAGDVCLVNWPQNDYWLGNLYDNGRDASGHFAAARELSLCLLYWMQTEAPHPGGRKQGWKGLRLRGDVTGTEDGDGLAMAPYYRESRRIRAVFTVTENHVGVDARAKLLGKKPREFAAEEFPDTVGTGSYRIDLHPSSGGDNYIDVSSLPFQIPLGALIPQRVENLLPACKNIGTTHVTNGCYRMHPVEWSVGEAVGELVAFCTTKKRVPRQVRKDAKLLADYQAQLAKAGSDMHWPADIAMRAR
>NZ_CP053452.1|WP_171475385.1|9117196_9117793_-|hypothetical-protein
MAVWKIIGIGCGVVVALGVAVTVAALVFVPRLFDFAQKKLAEEQERQAIAAAWDAPDRGAAPAQVFPLMVKGYRLDRADDRADVPELNLDVKGAHAVYSAGASRVEVFAYPVSKLEAEALMARAERAYEQDGERGVREFTSVDIEDSYGRVYLSAPGLGQSHLWFTKGWLLVFRTPDAEDREAFVREFLRTPRRQGGV
>NZ_CP053452.1|WP_171475386.1|9118051_9118456_-|VOC-family-protein
MARVTGIGGVFFKSNDPAALAAWYQKHLGMVLEKSFGGAILRWPDDRAEDKGLTVWHLADKGSQWFSPSDSSFMINYRVDDLGELLAGLRANGVEVLKGPESHENGRFAWVMDPDGNKVELWEPKIWNEKNKTD
>NZ_CP053452.1|WP_171475387.1|9118980_9119766_-|DUF3859-domain-containing-protein
MFAAFDWNEVITKALMGGVLGGIGGGVYGLFAFLTRKSDAQQQAEFEARERSRIHAQMHRKAKKPGPSPGLLGLVLLLMVPVIVVVCTLVVNPSLVTRPPRGGEDGSGIAAPSGTGKPRATIYEYGRYRAQSPVRGVPARDTSGNASAGREKDVVLLEQTEQIFCQAGESWGVRIRCSDFPVNRPYTVRQETYHPPINRPDGSVLTKSVHEFHVPQGEAPNPFYGWHFLKDHEYELVAGVWSILVFIDDVEVARKSFIIRK
>NZ_CP053452.1|WP_171475388.1|9119988_9120471_-|hypothetical-protein
MNRVRWCAVVISLTFTSMILAQKPDNKLPDAVVKALEKADALEVYSLGGQTTEVNGWHGAKVLGQTKVKSAADLTSMTAALKKGVADGDGGARCFIPRHGVRVAHAGKTYDFLICFECHWVYVFTDNSDKPLVLMIADAPQKAFNKLLTDAAVPLAPPKK
>NZ_CP053452.1|WP_171475389.1|9120552_9121290_-|hypothetical-protein
MPKLNQINALVTSRKGDAEKQITELYKLIQKEQLFAGRERTYRPLDEVNGQKLPPESQRVQQRADDLVRQAREKWTELWNLVLTQDTGNQSARADIVVDGKVILANVPVTSLLFLDKQVNDLETFVSKLPTPDPAEEWTHDPSTGLLRGKTTESLRTSKEPTVIVKYEATKEHPAQTELFTKDVPVGTWSQILYSGCIGTDRKNAILTRVRKLQDAIKLAREQANLLEVERQKAGEPLLGFVFGE
>NZ_CP053452.1|WP_171475390.1|9121509_9122115_-|DUF479-domain-containing-protein
MNFLAHLHLADGDAGDMTGGVAADFVRYPDLHRLTPDVLRGVMLHRHIDGFTDRHPVTLRSISRVARTMGWFGGIVIDIYYDHILARDWLRYSAEPLAAFAARSYRVLEDGHGQLPEDARDFIRKFIDQDRLNRYASRDGIEDTLARVSKVIAKRIPNRAIPLTDAMPRLIECDAELAADFHAFYPELIAFVIQHKSERPV
>NZ_CP053452.1|WP_171475391.1|9122396_9123695_-|PP2C-family-protein-serine/threonine-phosphatase
MTVAPDFFETEPRNWRARLAVSVEVMRELSRVTDPQEMYAIFARRMAQLFPVSRHLTLSRRGLRHPDYRVARFSMWKDPVNPWKESHRLPVHHGGLLAELLYGDQPRIIDNLVVDPDDPAAEYLAGQRSLLAVPHYDNGVSQNMLVLTREDTESFPRERVADLVLLSNLFTRATQTVVLSQAVKEAYDGLDYELRSIAEIQKSLLPAEKPKVPGLDVAVHYQTAKRAGGDYYDFFPLPNDRLGVLIADASGHGAPAAVLMAVAHSIAHTRVEHPQRPGEFLTYMNAHLTRRYTRPTGSFMTAFYAVFDPMNATLSYASAGHNPPRLLRCADGFKLALNRAQKLPLGIKPDEVYLEQTVPLLPGDQVVFFTDGVIEAVNTDGDVFGSARIDEELATCLPTAAALLRAILATHTLFTAGTTPADDRTLVVVKRL
>NZ_CP053452.1|WP_171475392.1|9124305_9125736_+|histidinol-dehydrogenase
MPVLKLRRIDLTASNAAAQIIKLRDQFRTDSEVVSAASKKKTQAVFGEALPPVRAVERICTDVRDKGLSAVLHYTELFDGVKLKADQIRVKPAELAEAHAKVGDDFLEVIRQIRYNVLQFQSGLLHCDAEMRVSGKHELQVRYRPLKRVGVYCPGGAAAYPSTLLMTVCPAQAAGCEQIVVCMPPNDKGAYNREMLATCHELGITEVYRFGGAQAIAAMAYGVEGMKPVDIIVGPGNQYVALAKKYVFGQVAIDCIAGPSEIVVLADDSAHPDYVALDLIAQAEHSPGVAVLVTWYEPLINEVQVALEKRLAKLSRADLARDSLERYGALVLAPTKAAAIDCVNAIAPEHLHIQTRDPDALVDDIDNAGAVFLGPFTPVAVGDYAAGPSHVLPTGGTSRFASGLNVNDFRKRTSILRFTRQGLKDISEDVVYLANKEGLTGHAASVELRANDNGPAARPKPKPDKVPAAAAPIAKK
>NZ_CP053452.1|WP_171475393.1|9125738_9126959_+|histidinol-phosphate-transaminase
MTGEEPTPNPSLQGGEHDLRDSVTSKSSVEATRAVTAFSSGKGDGGLGGIETVRPNIRAMAGYVPGEQLNDPDIIKLNTNESPYPPSPRVFDALRAALTSNSLRKYPQPFGDTFRNAAGRVLNVDPDSILIGNGSDDILTILTRAFVPEGGLIASPAPSYILYKSLAEIQGARFHAIPFTHDWRTDRDSWPRGASLSFVPNPNSPTGTVLDPIDVLRLSKRVSPNPLVVDEAYADFAEPPGYVPLVADWDNLIVTRTFSKSYALAGIRFGFAVARPELVRELLKVKDSYNCDVLSLAAATAAIEDQDYFREVRTKIIATRARMTRELAALGFEVTPSHANFVWCRRADKPLKPIYEELKRQKILVRYMNYPVGPIGSPPGAYDGLRMSVGTDAEIDRLLEELRGIV

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Crispr_ID: NZ_CP053452_36

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053452_36

9325241-9325353

Orphan

Consensus_repeat	Method
AGGGCGCGACTCGCGGAGCGCGTCGCCTACTTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP053452_36

>merge|NZ_CP053452|36|9325241-9325353|CRISPRCasFinder
AGGGCGCGACTCGCGGAGCGCGTCGCCTACTTTGCCGGTCGCGCTATTGTAAGTGATGGCGGCCCACGACTCCAAATGGCAGGGCGCGACTCGCGGAGCACGTCGCCTACTTT

>NZ_CP053452|36|35|9325241-9325353|CRISPRCasFinder
AGGGCGCGACTCGCGGAGCGCGTCGCCTACTTT	GCCGGTCGCGCTATTGTAAGTGATGGCGGCCCACGACTCCAAATGGC
AGGGCGCGACTCGCGGAGCACGTCGCCTACTTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053452.1\|WP_171475522.1\|9328357_9331870_-\|VCBS-repeat-containing-protein	unknown	unknown	gnl\|CDD\|369440
NZ_CP053452.1\|WP_171475513.1\|9309456_9310062_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274357
NZ_CP053452.1\|WP_171475527.1\|9338597_9339548_-\|GGDEF-domain-containing-protein	unknown	unknown	gnl\|CDD\|143635
NZ_CP053452.1\|WP_171475526.1\|9337938_9338256_-\|zf-TFIIB-domain-containing-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171475520.1\|9325380_9326511_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171475519.1\|9324035_9325187_+\|pyridoxal-phosphate-dependent-aminotransferase	unknown	unknown	gnl\|CDD\|181651
NZ_CP053452.1\|WP_171476276.1\|9333391_9334294_-\|radical-SAM-protein	unknown	unknown	gnl\|CDD\|224165
NZ_CP053452.1\|WP_171475524.1\|9334430_9335756_-\|asparagine-synthetase-B-family-protein	unknown	unknown	gnl\|CDD\|238949
NZ_CP053452.1\|WP_171475523.1\|9331895_9333395_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|223717
NZ_CP053452.1\|WP_171475518.1\|9319990_9320917_-\|sugar-phosphate-isomerase/epimerase	unknown	unknown	gnl\|CDD\|366542
NZ_CP053452.1\|WP_171468893.1\|9317493_9319848_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372323
NZ_CP053452.1\|WP_171475521.1\|9326507_9328361_-\|CRTAC1-family-protein	unknown	unknown	gnl\|CDD\|369440
NZ_CP053452.1\|WP_171475528.1\|9340057_9340465_+\|response-regulator	unknown	unknown	gnl\|CDD\|381118
NZ_CP053452.1\|WP_171476275.1\|9321413_9323768_+\|arylsulfatase	unknown	unknown	gnl\|CDD\|293749
NZ_CP053452.1\|WP_171475514.1\|9310561_9311470_+\|DUF1559-domain-containing-protein	unknown	unknown	gnl\|CDD\|284919
NZ_CP053452.1\|WP_171475516.1\|9312107_9314852_+\|WD40-repeat-domain-containing-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171475515.1\|9311499_9311943_+\|carboxypeptidase-regulatory-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|379297
NZ_CP053452.1\|WP_171475517.1\|9314984_9315392_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379228
NZ_CP053452.1\|WP_171476274.1\|9315479_9317327_+\|DUF885-domain-containing-protein	unknown	unknown	gnl\|CDD\|377577
NZ_CP053452.1\|WP_171475525.1\|9336017_9337904_+\|CRTAC1-family-protein	unknown	unknown	gnl\|CDD\|369440

Protein	Function_ID	Function_description	E-value
NZ_CP053452.1\|WP_171475522.1\|9328357_9331870_-\|VCBS-repeat-containing-protein	gnl\|CDD\|369440	pfam07593, UnbV_ASPIC, ASPIC and UnbV. This conserved sequence is found associated with pfam00515 in several paralogous proteins in Rhodopirellula baltica. It is also found associated with pfam01839 in several eukaryotic integrin-like proteins (e.g. human ASPIC) and in several other bacterial proteins.	7.03154e-09
NZ_CP053452.1\|WP_171475513.1\|9309456_9310062_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	2.10183e-19
NZ_CP053452.1\|WP_171475527.1\|9338597_9339548_-\|GGDEF-domain-containing-protein	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	1.18929e-61
NZ_CP053452.1\|WP_171475519.1\|9324035_9325187_+\|pyridoxal-phosphate-dependent-aminotransferase	gnl\|CDD\|181651	PRK09105, PRK09105, pyridoxal phosphate-dependent aminotransferase.	2.59371e-159
NZ_CP053452.1\|WP_171476276.1\|9333391_9334294_-\|radical-SAM-protein	gnl\|CDD\|224165	COG1244, COG1244, Predicted Fe-S oxidoreductase [General function prediction only].	1.02113e-32
NZ_CP053452.1\|WP_171475524.1\|9334430_9335756_-\|asparagine-synthetase-B-family-protein	gnl\|CDD\|238949	cd01991, Asn_Synthase_B_C, The C-terminal domain of Asparagine Synthase B. This domain is always found associated n-terminal amidotransferase domain. Family members that contain this domain catalyse the conversion of aspartate to asparagine. Asparagine synthetase B catalyzes the assembly of asparagine from aspartate, Mg(2+)ATP, and glutamine. The three-dimensional architecture of the N-terminal domain of asparagine synthetase B is similar to that observed for glutamine phosphoribosylpyrophosphate amidotransferase while the molecular motif of the C-domain is reminiscent to that observed for GMP synthetase .	9.04612e-13
NZ_CP053452.1\|WP_171475523.1\|9331895_9333395_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|223717	COG0644, FixC, Dehydrogenases (flavoproteins) [Energy production and conversion].	5.38889e-10
NZ_CP053452.1\|WP_171475518.1\|9319990_9320917_-\|sugar-phosphate-isomerase/epimerase	gnl\|CDD\|366542	pfam01261, AP_endonuc_2, Xylose isomerase-like TIM barrel. This TIM alpha/beta barrel structure is found in xylose isomerase and in endonuclease IV (EC:3.1.21.2). This domain is also found in the N termini of bacterial myo-inositol catabolism proteins. These are involved in the myo-inositol catabolism pathway, and is required for growth on myo-inositol in Rhizobium leguminosarum bv. viciae.	2.30092e-30
NZ_CP053452.1\|WP_171468893.1\|9317493_9319848_+\|hypothetical-protein	gnl\|CDD\|372323	pfam12810, Gly_rich, Glycine rich protein. This family of proteins is greatly expanded in Trichomonas vaginalis. The proteins are composed of several glycine rich motifs interspersed through the sequence. Although many proteins have been annotated by similarity in the family these annotations given the biased composition of the sequences these are unlikely to be functionally relevant.	0.000525844
NZ_CP053452.1\|WP_171475521.1\|9326507_9328361_-\|CRTAC1-family-protein	gnl\|CDD\|369440	pfam07593, UnbV_ASPIC, ASPIC and UnbV. This conserved sequence is found associated with pfam00515 in several paralogous proteins in Rhodopirellula baltica. It is also found associated with pfam01839 in several eukaryotic integrin-like proteins (e.g. human ASPIC) and in several other bacterial proteins.	6.54557e-16
NZ_CP053452.1\|WP_171475528.1\|9340057_9340465_+\|response-regulator	gnl\|CDD\|381118	cd17580, REC_2_DhkD-like, second phosphoacceptor receiver (REC) domain of Dictyostelium discoideum hybrid signal transduction histidine kinase D and similar domains. Dictyostelium discoideum hybrid signal transduction histidine kinase D (DhkD) is a large protein that contains two histidine kinase (HK) and two REC domains on the intracellular side of a single pass transmembrane domain, and extracellular PAS and PAC domains that likely are involved in ligand binding. This model represents the second REC domain and similar domains. DhkD activates the cAMP phosphodiesterase RegA to ensure proper prestalk and prespore patterning, tip formation, and the vertical elongation of the mound into a finger, in Dictyostelium discoideum. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	6.4806e-33
NZ_CP053452.1\|WP_171476275.1\|9321413_9323768_+\|arylsulfatase	gnl\|CDD\|293749	cd16025, PAS_like, Bacterial Arylsulfatase of Pseudomonas aeruginosa and related proteins. Sulfatases catalyze the hydrolysis of sulfate esters from wide range of substrates, including steroids, carbohydrates and proteins. Sulfate esters may be formed from various alcohols and amines. The biological roles of sulfatase includes the cycling of sulfur in the environment, in the degradation of sulfated glycosaminoglycans and glycolipids in the lysosome, and in remodeling sulfated glycosaminoglycans in the extracellular space. The sulfatases are essential for human metabolism. At least eight human monogenic diseases are caused by the deficiency of individual sulfatases.	0
NZ_CP053452.1\|WP_171475514.1\|9310561_9311470_+\|DUF1559-domain-containing-protein	gnl\|CDD\|284919	pfam07596, SBP_bac_10, Protein of unknown function (DUF1559). A large family of paralogous proteins apparently unique to planctomycetes.	1.10002e-43
NZ_CP053452.1\|WP_171475515.1\|9311499_9311943_+\|carboxypeptidase-regulatory-like-domain-containing-protein	gnl\|CDD\|379297	pfam13620, CarboxypepD_reg, Carboxypeptidase regulatory-like domain.	0.00773637
NZ_CP053452.1\|WP_171475517.1\|9314984_9315392_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379228	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	4.61133e-14
NZ_CP053452.1\|WP_171476274.1\|9315479_9317327_+\|DUF885-domain-containing-protein	gnl\|CDD\|377577	pfam05960, DUF885, Bacterial protein of unknown function (DUF885). This family consists of several hypothetical bacterial proteins several of which are putative membrane proteins.	3.0161e-105
NZ_CP053452.1\|WP_171475525.1\|9336017_9337904_+\|CRTAC1-family-protein	gnl\|CDD\|369440	pfam07593, UnbV_ASPIC, ASPIC and UnbV. This conserved sequence is found associated with pfam00515 in several paralogous proteins in Rhodopirellula baltica. It is also found associated with pfam01839 in several eukaryotic integrin-like proteins (e.g. human ASPIC) and in several other bacterial proteins.	1.03981e-18

>NZ_CP053452.1|WP_171475519.1|9324035_9325187_+|pyridoxal-phosphate-dependent-aminotransferase
MRTAQDRTPRTDPHASDFSRRDLYRRALLAAGAALPLCTEAVLAQDVKSIANIPPDAVRLNANENPLGPCPAALDALRNVAAQGNRYPFRLTETFVRAMAEAGGVPASHVLPAAGSSDPLHRVVLAFTSPSRPLVVASPGYEAPERAARFVGAKVISVPLRKDYSHDTRAMVKADANAGVIYICNPNNPTGTVTAKADIEYVVANKPKGCVVLIDEAYIHYAKTTGSAASLVAASDVIVLRTFSKIYGMAGLRAGAALGRPDLLEKLGGFAGMNFLPATGLAAAVASLEDKKVVPDRCKAVSDVREDLFAWLERKGYGFIPSEANMVMIDGKKPGRELMAALLKEKVAVGRTWAALPTHVRVTIGTPEEMTKFKTAFEKVMDS
>NZ_CP053452.1|WP_171476275.1|9321413_9323768_+|arylsulfatase
MADTSAQDQRPVAPAADEPKGRPTPGADKLDRTTLPIAEPNRDPITVLDARNAKAPPRFEVKAPKGAPNVVVVLIDDMGYGHPSTFGGACAMPTLDRMAAGGLRYTNMHVTALCSPTRAALLTGRNHHTCNLGAVEDVATAFPGNTGVRPNSVAPLAEMLRLNGYNTAAFGKWHLTPPWELSVSGPFGNWPTQSGFEKFYGFLGGETNQWAPLVYDGLTKVERPKKPDYHFLTDMTDRAIAWTRFQQAMTPDKPFFMYFAPGATHAPHHCPATWADKYKGKFDGGWDKYREDALARQIKLGIVPPGTKLAPKPKDIKDWDALSADEKRLFARQMEVFAGFAEYADAEVGRLVNALEELDAMENTLFLYIAGDNGASAEGGTVGTFNELTYFNGVPQTLGDQLKNLDKWGGPETYPHFAAGWAIAGNTPFAWSKQVASDFGGTKNGMVVHWPRGIKAKGEVRTQWHHVVDIAPTALEAAGLPFPQTVNGTTQRPFEGGSFLYSFGDAKAKSRHTTQYFEIAGNRAIYHDGWLARTIHKAPWEAQPRADLTRDAWQLFDTARDFSLADDRAAQEPDRLKDMQALFLKEAVKYNVLPIDDRGIERLNPALAGRPDLMAGRTSLTLHEGMTGMMENTFINVKNRSHTITAEVELPKDAGNGVIVAQGGRFGGWSLYLKDGKPTYVYNFVGLERTVVAGPQAVPTDKATITLAFAYDGGGLGKGGTATLSVNGQKVAEGKIPHTTANQFSTDEGADVGVDEDTPVSEDYKPGEPSRFTGKVRKVTIELK
>NZ_CP053452.1|WP_171475518.1|9319990_9320917_-|sugar-phosphate-isomerase/epimerase
MFTDRRRFLAASATLVAGTSGRAGAAEGPKTRPTHIGVSTYSFWQFKNDKLRDVETCIDLAGEMGFDAVEILHRQMTDESAAGMQKIKRRAFLNGMGLCGFSIHQGFVYKDKDERQKNIDHTIKCLEMCYAMGIPTMRVNTGRWGTIKSFDDLMKNRGVEPNLPGFTDEDGFKWVTDALTACLRTAEKCGVVMGLENHWGLGRTPEGVLKIVDAVDSPWLRVTMDTGNFLEDPYDNLEKLAPKTVLVQAKTYFGGGLWYSLDLDNDRIARMLRKHKYAGFVSLEFEGKEDPRTGVPKSLEALRKAFAV
>NZ_CP053452.1|WP_171468893.1|9317493_9319848_+|hypothetical-protein
MTTPTHRSNRPTTPARRFRPTLEVLDDRTAPAVFTVTLTTDSGPTTSAVTPLGPGTAGDLRNAIYQADQTPGTQNVIDLTHVSGTITLEAMLPPIFTTGSGSLLIEGAGNITISGANTYRDFFVVQGTVGFSGLTIANGLAHGGNGSGAGGGGAGLGGGLLIDGTNAATTVTLTNVTFSGDQAVGGSGGTGGLGGGGAPAATAAPGVSRWWRRRVPRHRRQQRRWRRRLHRGRGNLGANGTAIGGGGGGNTGSGGGTGVSGGGSGSSGTTVGGGGGGGVSVSGFPISSTGTDGTTGSGGSGGSVAAAAGATAAAAVTGDYGGGGGSSSGSSAGGSGGFGGGGGSSNSGGTGGAGGFGGGGGGATTPGTGGTDAGNADTSHGGGGAGLGGAVFVRAGTLYLIGTTFSNNSATGGTSGGGTATAGQGVGGAVFVNSGATATALGAAPTYSGNTAGTSPNVSGTLTTNGAATLTTTTGTPQTATINQPFATALEATLTTGVSPIANAVLPFTAPTSGASATLSSLGGPTNSSGQVSVTATANGTVGTYNVTAGGTGLQASFSLQNASPPPPPPPPPPPASPPPPASPPPPPPPVGSVSVAYGPRGEILEVVDSTGILTQYDSSGVHPLIGGVASTSVAYGPSGAVFLVTYQTGVLVLYDAAGAHSLLGGIRAAALAFGPSGQEVFDIVDSTGLLTQYDSSGAHALFGGVQSVSAAFGPSGEFIDVVNTSGVFTQLDSTGVHPLIGNVRAAGATYGGVPLAEVAALILADGTLIQYDASGAHTLGTVK
>NZ_CP053452.1|WP_171476274.1|9315479_9317327_+|DUF885-domain-containing-protein
MQARPSNIRCRSRPVSRILTVLLSLRHPREEQPVTRLRWPALAGLVLIALGAAPSTHPAAADAPAPGSFATLVDEYYAALFAWDPNQATYAGIHDYDDKLADLSEANYTRRAATLRKQHERLRDLRTGKLTEAEAIDGEALDHAIRAELLEIESVRDWKRNPVIYLGKPAEAIDLLMKRSFAPPADRLKAVIGRLRAAPPVLAAMKANVGAPPKEFADLGVIVAKGSVGFFRTDLPAWAKSAAGKDEKLLAEFTAANAAVIDSFESAVRWLDKDLLPKANGKYAIGAKAFMKKLEAEEMLDIPLDKLLAIGEANLKRDQEAFVATARKIDPKRTPAEVLATLNEDHPKPEDLVGATRGTIERTRKFLIDKKIVTLPSEVRPTIAETPAFMRTGGFASMDTPGAYETKATEAFYYVTPPEKEWEARRKNEHMRQFNRTGMDIITIHEAFPGHYLQFLYAKQYPTKVRKLYFCGTNAEGWAHYAEQMAVEEGYGDGDPKVRLAQLNEALLRDCRYVVGIKLHTEGWTVEQGKRFFVEQGYIEPETAFQEARRGTYNPTYLYYTLGKLQIYKLRGDVQKAKGAAFNLQAFHDQFVRQGALPIKLIRRIMLPGDTGPTL
>NZ_CP053452.1|WP_171475517.1|9314984_9315392_-|GNAT-family-N-acetyltransferase
MIHRYLSRETYWAAGIPRDTLLKAVAASVCFGVYGADRQVGFARVVTDRATFAYLCDVFILPEYRGRGLSKWLMECVVAHPDLQGLRRFVLVTRDAHALYAKFGFEPPADPAGYMHVHKPDVYRVPMNPGGTSPD
>NZ_CP053452.1|WP_171475516.1|9312107_9314852_+|WD40-repeat-domain-containing-protein
MWLEQLRRSLGLTSRRPVALRAAKTRTTRSRLGMESLEAREVPAVINVISTLDNNDAVGTAGHAGTAADPFLASSLRSAISYANAHSGGNTINLTVAGDYKITLAGTANETDNLAGEFDIYNTGGDLTIQNTSGGAVAVDANHMNRVFDINPNLTTTGFLVTMQGFTIENGVASDLNNLDGITSSGGGVLVNGHASLTLNNVVVANNTANANGGGVDFGNTVDAPWVFSTTNTTFSNNHAGDAGGGLNADGSGTITIGAGSVFSNNTCVNQGAGIWLNGLQEGTTATFDTANLTVTSALFIGNSAQTQLGGGIGNSGNGAVTVTGSTFENNTAGTTGGAFSDMTGQTAGSSLTVTNSLFLNNYAFMNGGAIASGAPTTTITDTEIKGNSSGASGGGVFAYGTTLTLLSDTLADNTSTNSGGGILLETTGTGQAASSITNTTISGNGAVNTNDANSNGGGIDVGGSSLVLQNSTISGNYAFIGGGIFSDGATGSTFSIQSTIVAGNRVTDNGTDIDNLGTVPITDLGNNLIGVLPAVQNTSEGFPVATDQIGGLGNPVNPLLGALTNNGGPTVGTAGASMTLETQALLSGSTAIDAGSNPATLTTDARGFTRTVGQGTDIGAFEVQPALTLTPSSIPALQFGQGYSQTVTATGGTGTVTLTYTITGTLPPGVTVRLASPTSVTISGTPTGSGFATITVTASDQGNDRVSTSYTLAVTAPPVVHTASVSAAFGPNGEVLEVVGTDGVLTQYDSTGAHKLIGGVRDVSVAFGPRGEVFEVVGTDGVLTQYDSAGAHVLADNVLSANVAFGPNGEVIEVVGTNNVLTQYDSTGMHALLGGVVSVSVAYGPSGAVYTVVGTDGTLSRYDSTGVHVLANNALSASVAIDPNGHQVIDYITTGGLLIQIDGAGQHNLIQVF
>NZ_CP053452.1|WP_171475515.1|9311499_9311943_+|carboxypeptidase-regulatory-like-domain-containing-protein
MWTRRTKQTLTVAVIAFLSGCGGSGDLTGTVRYRDQPLSSGTVQVRGADGIVRSAPIESDGTYTIPNLPTGAVAVSVTCRDPREVEYSRAKAAGGRGGPPTSAAKAGGKVASQEGFSLIPAAYSELERSGLGTTLRSGPNRYDIDLK
>NZ_CP053452.1|WP_171475514.1|9310561_9311470_+|DUF1559-domain-containing-protein
MPFVPHPATRSPRKKAATRGHTPRRGFTLIELLVVIAIIAILIGLLLPAVQKVRESAARVKCQNNMKQIALACHSYESAYGNLPPGRNPAVPTEFTGAGGWTYQLLPHVEQQPLYNACQQNFHANVGNPVPLYYCPSDGRGDVTGSGGTTLGQTSAGLTWYVGVVGSTYNSDGTVPSGQGGIFQPGTKVRVTDVTDGTSNTLMIGERPPAADLAFGWWSYSDFDNLLGTQNYLSFYPNCTLPGLFSPGSTAANCSATKFYSLHSGGGNWAFGDGSVRFLTYNSQAVTVPLATRSGGEVVADY
>NZ_CP053452.1|WP_171475513.1|9309456_9310062_-|sigma-70-family-RNA-polymerase-sigma-factor
MDDSIGPVTSSSLLGKLRADPSDEAAWQEFVTRYGRLIYDWARRWKLQEADVDDVAQIVLVRLTQRLRTFVYDQSGSFRGWLRTLTRNALSDFVRSRERPDRGSGDSGVQFLLDSAEAQEELASRLEEQFDKELLEEAMGRVRLRVTPPSWDAFRLTALEGRSGAEAAGHLNMPVTAIFKARSRVQKMIQEELRKLEGVET
>NZ_CP053452.1|WP_171475520.1|9325380_9326511_-|hypothetical-protein
MTLPSAPAPTGPATGPATDSFVPVAQFAATAALVLGFYLLRGSLQGWVAGSIDPVTVRVIAIAGLLLALLAVWWKVVARDPRFHAPMLVTAVLALSDASFGLLDNHPAPPWLVDLTGGALTEYSPTFLTMAATVLCELALGRFMWGKWPHPASAYVSGISAGILVKSSLLWPFLLCGLISITSKYVLRIGNRHIWNPTNLGMTVMLFLAPQHVSSLSVQAGNNGLALVTIWVLGGMVMYKLGRFHIPFAFILAFVPLAFLRSAVTGHPWQTELAPLTHPMFQLYIFFMITDPKTTVRGWWKQVGVAVLVAAAETVFRLAFKDVHSLYHALFVVGPVANVIEIYSDRARAARGAQPSRPERTEESVGSVGGAVLGKV
>NZ_CP053452.1|WP_171475521.1|9326507_9328361_-|CRTAC1-family-protein
MSATIKRIIVTAFFIGLLVAVVVLNHSGDGTSEGQLSAAEALDRYGFYLTESAKPCGITFRHESPTLDQKLEHIMPLVAAMGAGVSIIDFDGDGWLDIYAVNGKEGGANHLYRNRGDHDRRGGGGTFEEVAAQLGVADLNQPGTGVCMGAIWADFDNDGFPDLFVYKWGRPELFRNKGGKGFERVTEHAGLPKWVNANTACWLDYDRDGLPDLFIAGYWRDDLDLWHLETPKVMPESFEYAKNGGRKYLLRNRGDGTFEDVTDRVGIKSTRWTLAVVAADLCGTGYPDIVLANDYGVSEFFANNRGKSFNEIGDEIGIGKAPKSGMNASLGDIFNKGQLAIYVSNITEAGNLVQKNNLWVPTGKTASGRPAYQNQADFLKVAQGGWSWGARFGDLNNDGRLDLYLTNGYVSAAKNKSYWYDYGKIAGGVNKLIENAQYWPPMGDQSLSGYQQKCLWINRGSEFTDVATAVGVSDTFDGRAVTMADLFNRGVLDVAVANQNAPLLLYKNTVGAGRDWVQFELTGGARPGRTGAWSNRSAIGAQVKLTWRQGAAGPVLQQLQVVTAGDGYAAQSMFRLHYGLGTDARVEKAEIIWPSGRTQTIRSPKTGTLHRVEEPAP
>NZ_CP053452.1|WP_171475522.1|9328357_9331870_-|VCBS-repeat-containing-protein
MPSYFRRHRSRLLAVVAVVLLAAAAFFVWKYLIRLPGPGNPVYEEYVAAFELGVAAMDVEVVDVAGANLDRSIELVPKEPAGWANRALLKLRTARIPEADSDLKEAERLVPDDPDVMKIRAVLEDRRGKYAAAVASLRKATAKDPEDVEALFFLAELTKREQKPDSDAEYQRLMEQILAVRPDNKHVQNERLRTAVQRSDRAALGDILNRLRAEAPNWKSQKGENPGDSLQQLFAKLEKAFEGGDWDAIVSAANIFANVYQSQPGYTRDSSEVTPHGGYRGNPLRVFRRLAPLRFKPPAPDTELTFTAEPITDAPAGRWDAATPVWLTGEGPPLLFLGNSAVVRRVGSAETLTALPLARDGIVPIDWDNDYRTDLLLVGPGGLKFYHQSGDGSFRDGTAETKLAAAVVKGDYAAALAADVDLDGDLDLILASRTGPPLFLRNNFDKTFTAQPIFPEVDGARALAWADLDRDGAPDAVILDSKGHLHVYANERSGNFRPWPVSPPEGTFLAIAISDADEDGVLDLIALRADGAVLRISDRNKRGAWDVAELARGDDATGAEPGSLRLLIEDLDNNGVPDLIVSGPSSGAAWLGSGGGKFERLAAAVPARACAAADLAGTGRIDLLALDAEGRPVRYRNTGQKAYHYQTVRFRAAQGAIEGDNRINSFGIGGEIEVRSGTHVVKRPVTAPVVHFGLGTRTRCDVLRITWPNGTSQVEFGKEADQTMFAEQRLKGSCPFLYTWNGERFVFVTDFMWSTPLGMYINAQDKGGFLQTTEWVRVRGDQLVPREGHYDIRVNANLWETHYFDHLALRVVDHPPETELYVDERFALEPSRPAYQLMGPTRPVAQARDHLGADATAAVRAVDGDYLDRAGRGLYQGITNDHWVEVDLGADAPTTGPVWLVAHGWIHPTDSSVNFALEQGSNARPRALTLEVPDGKGGWKVARDKIGFPAGKNKTILLRLDGLDGPGAARRFRLRTNMEIYWDALHYASERDATQVVEKELLPTVADLRFRGIVAMTQANKSSPELPHYDQVVSQRQPWRDLIGYHTRFGDIRELLEKTDDRYAILTAGDEIVLRFAAPPDPPAGWKRDFVWVSDGWVKDGDLNTRFGKTVLPLPSHNMASYDVAPTGLENDPVYRRYRKDWQTFHTRYVAPDAYERGLRTFRRSGENRP
>NZ_CP053452.1|WP_171475523.1|9331895_9333395_-|FAD-dependent-oxidoreductase
MTRYDCDLAILGSGFGGTLLAIIAQKLGYSVALLERGRHPRFAIGESSTPLADFKLAALADRFGLDWLRPFSKYGTWKATRPDLPCGLKRGFSFFRHEQGRPFTPHDDNALLVAASPDDATADTHWFRADFDAHLVDRAVAAGVPYLDECEIHTVRHTDAGWELEGARPGEAVSVRAGLLVDATGTGQVLAGALGIEPVAGGTLRARSRALYSHFTGVGEWHSVLEAESGPAATARHPFPCDAAALHQIIDNGWMWVLRFENGITSTGFSLDPEAHPLRAGETPEAEWHRLLNTYPSIGRQFARAVPVRPFVRTGRLQRRLTRAAGADWALLPHAAGFLDAWLSPGIAQTLFAVNRLGGILAEERGGAGRERRLEVYGRTVLRELAWVDEITGTCFACFDRFPVLVSVSMMYFVAAIYCEERERAGQGSPDDAFLLTDHPEYRAVAGELLRKARGVPVAGAAAFADEVRDRLAPFDSCSLCEPGRRNMHPFLGTLSRSR
>NZ_CP053452.1|WP_171476276.1|9333391_9334294_-|radical-SAM-protein
MLGLRPVRNPLAPDRPYASIVEAEPAADGRLVDVATLFLTNRECPFRCLMCDLWKNTLTDSVAPGQIPEQIRWALERLPPAQHLKLYNAGSFFDPRAIPEGDYAEIARHAAGFERVIVECHPRLVGRRCFEFRSLLSGQLEVALGLETAHPDVLARLNKQMTLDDFARAAAELRAHGIAVRAFIMVRPPFLAEADGVEWAKRSLDFAFAHGVECCSLIPTRGGNGAMEELARQGHYAPPALDSLETALEYGLSLRAGRVFLDLWDIGAVSPDAPNRAARVARLARMNLSQQLEPGTGPTS
>NZ_CP053452.1|WP_171475524.1|9334430_9335756_-|asparagine-synthetase-B-family-protein
MHRSIPLSRVIDLTDPAGNRIYNMTVEEARDRIANGDAGAVGGIDGEFALIGQRGKNIFLARTIGRLLRYFIAKWTDGPILIVADRIDAIRAQLEALGLADQFHPSYTRMVPAHYVVRIELVGCPDPNPTYTRFFTPTRNALPADPEAIGERYIGAAYNEIVRWLDRVPPREPIGVCFSGGIDSGAVFLLAYHALLKRGDSPSRLKAFTLSVDGGGPDVEQARAFLARLGLELFLEPIPVRSADVTIEDAIRVIEDYKPLDVQSGAMALALCRGIRARYPEWKYLLDGDGGDENLKDYPIEDNPELTIRSVLNNMMLYQEGWGVQAIKHSLTYSGGQSRGYARTYAPVAVTGFTGLSPFVCPSVIDVAESIPFIELTDWDHDRLYALKGRVVAAGVKAVTGLDMPVFPKRRFQHGAANHPGTLFPSRQAEYRRAYQKVFLG
>NZ_CP053452.1|WP_171475525.1|9336017_9337904_+|CRTAC1-family-protein
MSTRNRKPAPPARGLRVVKWLLGAVVLVALAVGVGMALRAPTAVPAPEPELPVVEARFTDVTDRAGIRFRHANGAAGRKLLPETMGAGVAVLDFDRDGKPDLFFVNSRPWPGADRTGARATQALYRNRGDGTFEDVTVALGLGVECYGMGAAVADYDNDGWPDIFITAVGGNRLFRNVEGRRFEDATDRTGLSSTTWTNDTAANFARRTEPMSFPSSAVWLDYDGDGRLDLFVCNYVTWSPARDLGVAAVLPGGIRAYVPPQQFTGAQCQLFRNVDGTRFEDESAAAGVLVTDPGEPGGAGRPVGKALGVVVCDPDGDGWPDIIVANDTVRNFFFHNRPGPNGNRTFQETGRFSGIAYADGRPRGGMGIDAGEIAPGTLGVVIANFTHEPDSLFLLKGTSPVLFADAAVELGLAGASTRAMKFGAVLFDFDRDGRLDLFTANGHLEPDIATTHTGQTHAQAGQLFWKTGPPRQGFVAVTGPGGLDAFPLMVGRGCAYLDYDGDGKLDLVVTENNGRARLFRNETPDGNTWVRFALSGEKGRTNRDGIGAEVTVHAGGLVQRRYVTAAHGYLSQCEPSAYFGLGSAATIDRVTVRWPGRTGHTQEWQNVPAGTTYRLMEGAPEPIPMGR
>NZ_CP053452.1|WP_171475526.1|9337938_9338256_-|zf-TFIIB-domain-containing-protein
MSLRCAACGTEFVATDGSSPPPAPKPTRSPIAPTESLPPLETTERARGFTSDVRVLADGRRLVTCPQCRHAEIEVPRRATVAEIMRCPQCRGTFLVGLRAASEDR
>NZ_CP053452.1|WP_171475527.1|9338597_9339548_-|GGDEF-domain-containing-protein
MTKSEPGCDTEFTLPIAVQKRPTGTASLVHIHPPGPGAGRRHTLDGTPLLIGRVEGCDICLNEHAVSRRHACIDLVDGIYSVRDLDSTNGTRVNDQPVGSDPRPLRDGDYLQIGNYVFRFLAGGNVEAEYHEELYRRTFQDALTRLHNRRALNEFLERELIRSQRYNRPVSVILFDLDRFKAVNDSHGHLCGDHVIREVADLLRAVTRGEDICARYGGEEFALVLVEADHFSALAVAERVRTLVNCHAFRFEGVELALTISAGVATTCGDRWATTAGLLHEADERLYAAKREGRNRVVGEPAREDDAGAMSTWVVT
>NZ_CP053452.1|WP_171475528.1|9340057_9340465_+|response-regulator
MTLVTVHTRPRVLCVDDNHDVADSAADLLDLHGFETRVCYDGQTALTLVVNFAPDICLIDLNMPGMDGDQVAAQLRDVGRPVVLVAVTAASDDRARRRIAAAGFDLHLVKPVDPRQLPTILTSIWPKMSEDAPGS

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Crispr_ID: NZ_CP053452_42

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053452_42

9828609-9828691

Orphan

Consensus_repeat	Method
CCCGCACCACCTACGCCTACGAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP053452_42

>merge|NZ_CP053452|42|9828609-9828691|CRISPRCasFinder
CCCGCACCACCTACGCCTACGACAACGCCAACCAGCTGGGCCGCGAGCAGACCAACACGGCCCGCACCACCTACGCATACGAC

>NZ_CP053452|42|41|9828609-9828691|CRISPRCasFinder
CCCGCACCACCTACGCCTACGAC	AACGCCAACCAGCTGGGCCGCGAGCAGACCAACACGG
CCCGCACCACCTACGCATACGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053452.1\|WP_171475896.1\|9815226_9815775_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225843
NZ_CP053452.1\|WP_171475897.1\|9816167_9816377_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171475898.1\|9817893_9818166_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171475893.1\|9811800_9812997_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|366154
NZ_CP053452.1\|WP_171475892.1\|9809600_9811091_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|366154
NZ_CP053452.1\|WP_171475895.1\|9814656_9815217_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171475894.1\|9813009_9813789_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|372681
NZ_CP053452.1\|WP_171475899.1\|9818855_9819668_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|340821
NZ_CP053452.1\|WP_171475890.1\|9807281_9808970_-\|ATP-dependent-Clp-protease-ATP-binding-subunit	unknown	unknown	gnl\|CDD\|223616
NZ_CP053452.1\|WP_171475891.1\|9808962_9809217_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP053452.1\|WP_171475896.1\|9815226_9815775_-\|hypothetical-protein	gnl\|CDD\|225843	COG3306, COG3306, Glycosyltransferase involved in LPS biosynthesis [Cell envelope biogenesis, outer membrane].	0.00302233
NZ_CP053452.1\|WP_171475893.1\|9811800_9812997_-\|glycosyltransferase	gnl\|CDD\|366154	pfam00535, Glycos_transf_2, Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.	8.46344e-08
NZ_CP053452.1\|WP_171475892.1\|9809600_9811091_-\|glycosyltransferase	gnl\|CDD\|366154	pfam00535, Glycos_transf_2, Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.	4.0915e-14
NZ_CP053452.1\|WP_171475899.1\|9818855_9819668_+\|hypothetical-protein	gnl\|CDD\|340821	cd03789, GT9_LPS_heptosyltransferase, lipopolysaccharide heptosyltransferase and similar proteins. Lipopolysaccharide heptosyltransferase (2.4.99.B6) is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family also contains lipopolysaccharide 1,2-N-acetylglucosaminetransferase EC 2.4.1.56 and belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.	0.00124904
NZ_CP053452.1\|WP_171475890.1\|9807281_9808970_-\|ATP-dependent-Clp-protease-ATP-binding-subunit	gnl\|CDD\|223616	COG0542, clpA, ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones].	1.95206e-77
NZ_CP053452.1\|WP_171475894.1\|9813009_9813789_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|372681	pfam13704, Glyco_tranf_2_4, Glycosyl transferase family 2. Members of this family of prokaryotic proteins include putative glucosyltransferases,.	3.18117e-12

>NZ_CP053452.1|WP_171475899.1|9818855_9819668_+|hypothetical-protein
MIDRGECGSCVAKWVYACDVYGRCSPHGWHAGVKRCDGCVHRADRGSEQPDPDVRRAVLLYEGGTSDALVLSAAIESLHRAHPGRFVTAVAGPGAELFDHNPHVVTAEPVIDRAPVAWERLAVPGTPDECPLDALRDSCNALGAALGVPVPLAVDRPCVYLSPDERGRAPQVPEGTGGSPRSWLVDGGGGDEGPAGRWTAADLPRVAELVGDRVRIVPIGAAGTDQRELARAVWHAAGARAGGTPTAPVRRVREAVCVRRRGAGRRGVPD
>NZ_CP053452.1|WP_171475898.1|9817893_9818166_-|hypothetical-protein
MLRIRLDELEDEDLAPIRLDELEVDELTWLDELEEDELTWLDELEEDEPKRLDEIKDDVLPLIGDPLDEGQLQLELDPPAYAVTMTWRVV
>NZ_CP053452.1|WP_171475897.1|9816167_9816377_+|hypothetical-protein
MSARCRAGRGAGIDDEPAVPSDQVEIGAAVGDHHAILRPEVFGRERLARQRFRSGPRPDRGSVGRCGSL
>NZ_CP053452.1|WP_171475896.1|9815226_9815775_-|hypothetical-protein
MQSHRQVLERAISDQVGALLVLEDDACFRPGFRQEVERFLAAAPDDWDQLMLGGQHMATPRAAGPGVVRCVNCQRTHAYAIRGPFLRHLYSRWCAASGHCDHIMGPMQGGYRVYAPDPFLVGQAQGPSDISGARNPAKFWVPPSADAAIALVRGPARSWRPSGGAACTPATTATRPRGSTAA
>NZ_CP053452.1|WP_171475895.1|9814656_9815217_-|hypothetical-protein
MPTPTRGAPLAAWVEMIAWEVASGNGRVGAVWHPAATPEVLRAAAPTRPVRVVEALTVEAGLRALPELTPVCPVPPVVLLRAPQAVVAELRERGWHTGYWRDPVTDLDNGLRELLMFTSDARRARLAALVEVLADEVEQIPNGVPVVWHPEVTAAELRAVTDRPVLEIRAEGTDEALAAWAAHGHA
>NZ_CP053452.1|WP_171475894.1|9813009_9813789_-|glycosyltransferase-family-2-protein
MHYLSVCAIVRNEARYLPEWVEFHRLVGVEHFYVYDDDSEVPVAVSLAAQIAAGYVTVEAVPGRGQHMQVYNRHGEQRRYDSMWTAFIDGDEFLVPHEGDDLRPLLSEFESEYAGLVVNWQVFGTSGHLLRPTGLLTEVMTHKLPVHAEINRHVKSIIQTTKLRHFPHPHRPVMHDGCHLCNEHRTYAPGPWLDVSVDRVQINHYYAKSLLDWGDKMRRGYADGSPPQHLWGVYDVDAACAEHDACAVRFADRLRARLC
>NZ_CP053452.1|WP_171475893.1|9811800_9812997_-|glycosyltransferase
MPPPSFLYRGLACQQHPAVPGVMARVLADLRPARVLEIGTAEGGFAPCLRDALDGSGLTAVPVLSYDLVARGGHAAVRAAGVDVRVQPVFGPSHRAVDARVAEYVRSPGPSLVLCDGGQKIKEFAALAPLLKTGDVIGAHDYAPNWDHFVRHVRGRTWDRLAFTDAAAVGPAATCGLTSWRPDDLGPVNWLWMRKTAAGRPALAPHPSGVTVCLATIPPRRTLLLRALESVASQTVRPEAVVVVCDYGREGAARTKTRTLEQVRTQWVTFLDDDDQMFPHHVELLLNHARASGADVAYSSAEVVAPDGRVLPNAEGWGRYGLPFDAQRLREISYIQTPALMRTERARSVGGFAAIGDSPHDEWNMYRAILDAGGTFSHLPRRTWRWHHWGGNTGGKAP
>NZ_CP053452.1|WP_171475892.1|9809600_9811091_-|glycosyltransferase
MSLEVVRTDPNVQHYETFAMLEIERLAKQEWVHDPILYLHTKGVSAPHDLGKKWWRLVMQEHLVRRWREHIPHLHSGYDAVGVNWHTHGEQHFSGTFWLASPDWIRRLPDFVAYHHAKGLTRYSCEMWIGAAQWCRAYSLACAGHDFCNPDYDFFALLPDWSQWAAERAEVVTWSREQAERERLPGPSLVVSFADSTDQFPTFRDAARVVARLDLLAHDATDRHGLVVPPSAEQARSILDFVRGNKRSPFIVMQCEKGIGRSRAAAAGVLWCRGEKQRAQAIMDMGTHNRALCRYICEAGGCPLPAEELVSVVARVKYSPDRLLGLILCLQRQRHQNWELVAVTDGPDLAAVELVESIAARGEKRVRVIVTPEPRGRWGHPYRQVGIDAAKGDWIALTNDDNYYVPGWLEQMLIAGRDADVVLCDTLHSYFGWRVYPTGPQPGGADLGCCMARAAVARAVPWPGDDPLADGRFIQSLAAQAGSRLGHVSRPLFVHN
>NZ_CP053452.1|WP_171475891.1|9808962_9809217_+|hypothetical-protein
MPTPRLADEQRVRVLAAVQGAGQGVEQVVEQRVAGVRGAAAHPRPARVPGEVVRCGDLAREQDRGVGVGRSGRGGIGHRRSPRA
>NZ_CP053452.1|WP_171475890.1|9807281_9808970_-|ATP-dependent-Clp-protease-ATP-binding-subunit
MGKSTLVAEFARRAAHDRGFLAAKRVLAVDARHTPPTRPAPKLTAVLEHTAPHADLVVCLDGLHELLLPAHRESNRPVLLAALARARCHLVAPLTPREFDDLAPDDPAFAEFFSVVYAPEPDPETALRVMHYFARGLAERYRVPVEPEAVRRAVALTANYVLNDQLPAKALKVLTAACEGADYDRRQLGRPVERVTADDVVRVVSDRTGIPADTLRGVADRTDYAAALGEVVFGQDHAVREVATELGLIKAGMTDPTKPASVLLLLGQTGTGKTEMAKALARFYSTSKRLKTYTLGNCVEAHSVATIIGVPPGYVGSDRGGRLVTELNADPYGVFLLDEADKAHPDVLQPFLNLFDEGWVTDQRGAKAHAQKSIFVLTTNVGQRMIADMHKEGKTVEEIATRMKEALGQIRHGKSDRPVFTPEFLARIKRVIVFRPLDAAAMAGIARKQAAELRRSWAEGRNKRLELPDPLVAYVGAAARRLDERANGKEGGRVVRKLVAEWIEAPLQRAMAADPEGYRRAAAVVIACDPPADPAADQPYPPPEVTVRFEPTDPPSTVVRDS

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Crispr_ID: NZ_CP053452_39

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053452_39

9827718-9827804

Orphan

Consensus_repeat	Method
CCCGCACCACCTACGCCTACGAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP053452_39

>merge|NZ_CP053452|39|9827718-9827804|CRISPRCasFinder
AGCGCACCACCACCGCCTACGACGCGGCCGGGCAGACCGTGGCCGTCATCAACGGCCTCGGGTACCGCACCAGCCACGCCTACGACC

>NZ_CP053452|39|38|9827718-9827804|CRISPRCasFinder
AGCGCACCACCACCGCCTACGAC	GCGGCCGGGCAGACCGTGGCCGTCATCAACGGCCTCGGGT
ACCGCACCAGCCACGCCTACGACC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053452.1\|WP_171475896.1\|9815226_9815775_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225843
NZ_CP053452.1\|WP_171475897.1\|9816167_9816377_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171475898.1\|9817893_9818166_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171475893.1\|9811800_9812997_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|366154
NZ_CP053452.1\|WP_171475892.1\|9809600_9811091_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|366154
NZ_CP053452.1\|WP_171475895.1\|9814656_9815217_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171475894.1\|9813009_9813789_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|372681
NZ_CP053452.1\|WP_171475899.1\|9818855_9819668_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|340821
NZ_CP053452.1\|WP_171475890.1\|9807281_9808970_-\|ATP-dependent-Clp-protease-ATP-binding-subunit	unknown	unknown	gnl\|CDD\|223616
NZ_CP053452.1\|WP_171475891.1\|9808962_9809217_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP053452.1\|WP_171475896.1\|9815226_9815775_-\|hypothetical-protein	gnl\|CDD\|225843	COG3306, COG3306, Glycosyltransferase involved in LPS biosynthesis [Cell envelope biogenesis, outer membrane].	0.00302233
NZ_CP053452.1\|WP_171475893.1\|9811800_9812997_-\|glycosyltransferase	gnl\|CDD\|366154	pfam00535, Glycos_transf_2, Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.	8.46344e-08
NZ_CP053452.1\|WP_171475892.1\|9809600_9811091_-\|glycosyltransferase	gnl\|CDD\|366154	pfam00535, Glycos_transf_2, Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.	4.0915e-14
NZ_CP053452.1\|WP_171475899.1\|9818855_9819668_+\|hypothetical-protein	gnl\|CDD\|340821	cd03789, GT9_LPS_heptosyltransferase, lipopolysaccharide heptosyltransferase and similar proteins. Lipopolysaccharide heptosyltransferase (2.4.99.B6) is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family also contains lipopolysaccharide 1,2-N-acetylglucosaminetransferase EC 2.4.1.56 and belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.	0.00124904
NZ_CP053452.1\|WP_171475890.1\|9807281_9808970_-\|ATP-dependent-Clp-protease-ATP-binding-subunit	gnl\|CDD\|223616	COG0542, clpA, ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones].	1.95206e-77
NZ_CP053452.1\|WP_171475894.1\|9813009_9813789_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|372681	pfam13704, Glyco_tranf_2_4, Glycosyl transferase family 2. Members of this family of prokaryotic proteins include putative glucosyltransferases,.	3.18117e-12

>NZ_CP053452.1|WP_171475899.1|9818855_9819668_+|hypothetical-protein
MIDRGECGSCVAKWVYACDVYGRCSPHGWHAGVKRCDGCVHRADRGSEQPDPDVRRAVLLYEGGTSDALVLSAAIESLHRAHPGRFVTAVAGPGAELFDHNPHVVTAEPVIDRAPVAWERLAVPGTPDECPLDALRDSCNALGAALGVPVPLAVDRPCVYLSPDERGRAPQVPEGTGGSPRSWLVDGGGGDEGPAGRWTAADLPRVAELVGDRVRIVPIGAAGTDQRELARAVWHAAGARAGGTPTAPVRRVREAVCVRRRGAGRRGVPD
>NZ_CP053452.1|WP_171475898.1|9817893_9818166_-|hypothetical-protein
MLRIRLDELEDEDLAPIRLDELEVDELTWLDELEEDELTWLDELEEDEPKRLDEIKDDVLPLIGDPLDEGQLQLELDPPAYAVTMTWRVV
>NZ_CP053452.1|WP_171475897.1|9816167_9816377_+|hypothetical-protein
MSARCRAGRGAGIDDEPAVPSDQVEIGAAVGDHHAILRPEVFGRERLARQRFRSGPRPDRGSVGRCGSL
>NZ_CP053452.1|WP_171475896.1|9815226_9815775_-|hypothetical-protein
MQSHRQVLERAISDQVGALLVLEDDACFRPGFRQEVERFLAAAPDDWDQLMLGGQHMATPRAAGPGVVRCVNCQRTHAYAIRGPFLRHLYSRWCAASGHCDHIMGPMQGGYRVYAPDPFLVGQAQGPSDISGARNPAKFWVPPSADAAIALVRGPARSWRPSGGAACTPATTATRPRGSTAA
>NZ_CP053452.1|WP_171475895.1|9814656_9815217_-|hypothetical-protein
MPTPTRGAPLAAWVEMIAWEVASGNGRVGAVWHPAATPEVLRAAAPTRPVRVVEALTVEAGLRALPELTPVCPVPPVVLLRAPQAVVAELRERGWHTGYWRDPVTDLDNGLRELLMFTSDARRARLAALVEVLADEVEQIPNGVPVVWHPEVTAAELRAVTDRPVLEIRAEGTDEALAAWAAHGHA
>NZ_CP053452.1|WP_171475894.1|9813009_9813789_-|glycosyltransferase-family-2-protein
MHYLSVCAIVRNEARYLPEWVEFHRLVGVEHFYVYDDDSEVPVAVSLAAQIAAGYVTVEAVPGRGQHMQVYNRHGEQRRYDSMWTAFIDGDEFLVPHEGDDLRPLLSEFESEYAGLVVNWQVFGTSGHLLRPTGLLTEVMTHKLPVHAEINRHVKSIIQTTKLRHFPHPHRPVMHDGCHLCNEHRTYAPGPWLDVSVDRVQINHYYAKSLLDWGDKMRRGYADGSPPQHLWGVYDVDAACAEHDACAVRFADRLRARLC
>NZ_CP053452.1|WP_171475893.1|9811800_9812997_-|glycosyltransferase
MPPPSFLYRGLACQQHPAVPGVMARVLADLRPARVLEIGTAEGGFAPCLRDALDGSGLTAVPVLSYDLVARGGHAAVRAAGVDVRVQPVFGPSHRAVDARVAEYVRSPGPSLVLCDGGQKIKEFAALAPLLKTGDVIGAHDYAPNWDHFVRHVRGRTWDRLAFTDAAAVGPAATCGLTSWRPDDLGPVNWLWMRKTAAGRPALAPHPSGVTVCLATIPPRRTLLLRALESVASQTVRPEAVVVVCDYGREGAARTKTRTLEQVRTQWVTFLDDDDQMFPHHVELLLNHARASGADVAYSSAEVVAPDGRVLPNAEGWGRYGLPFDAQRLREISYIQTPALMRTERARSVGGFAAIGDSPHDEWNMYRAILDAGGTFSHLPRRTWRWHHWGGNTGGKAP
>NZ_CP053452.1|WP_171475892.1|9809600_9811091_-|glycosyltransferase
MSLEVVRTDPNVQHYETFAMLEIERLAKQEWVHDPILYLHTKGVSAPHDLGKKWWRLVMQEHLVRRWREHIPHLHSGYDAVGVNWHTHGEQHFSGTFWLASPDWIRRLPDFVAYHHAKGLTRYSCEMWIGAAQWCRAYSLACAGHDFCNPDYDFFALLPDWSQWAAERAEVVTWSREQAERERLPGPSLVVSFADSTDQFPTFRDAARVVARLDLLAHDATDRHGLVVPPSAEQARSILDFVRGNKRSPFIVMQCEKGIGRSRAAAAGVLWCRGEKQRAQAIMDMGTHNRALCRYICEAGGCPLPAEELVSVVARVKYSPDRLLGLILCLQRQRHQNWELVAVTDGPDLAAVELVESIAARGEKRVRVIVTPEPRGRWGHPYRQVGIDAAKGDWIALTNDDNYYVPGWLEQMLIAGRDADVVLCDTLHSYFGWRVYPTGPQPGGADLGCCMARAAVARAVPWPGDDPLADGRFIQSLAAQAGSRLGHVSRPLFVHN
>NZ_CP053452.1|WP_171475891.1|9808962_9809217_+|hypothetical-protein
MPTPRLADEQRVRVLAAVQGAGQGVEQVVEQRVAGVRGAAAHPRPARVPGEVVRCGDLAREQDRGVGVGRSGRGGIGHRRSPRA
>NZ_CP053452.1|WP_171475890.1|9807281_9808970_-|ATP-dependent-Clp-protease-ATP-binding-subunit
MGKSTLVAEFARRAAHDRGFLAAKRVLAVDARHTPPTRPAPKLTAVLEHTAPHADLVVCLDGLHELLLPAHRESNRPVLLAALARARCHLVAPLTPREFDDLAPDDPAFAEFFSVVYAPEPDPETALRVMHYFARGLAERYRVPVEPEAVRRAVALTANYVLNDQLPAKALKVLTAACEGADYDRRQLGRPVERVTADDVVRVVSDRTGIPADTLRGVADRTDYAAALGEVVFGQDHAVREVATELGLIKAGMTDPTKPASVLLLLGQTGTGKTEMAKALARFYSTSKRLKTYTLGNCVEAHSVATIIGVPPGYVGSDRGGRLVTELNADPYGVFLLDEADKAHPDVLQPFLNLFDEGWVTDQRGAKAHAQKSIFVLTTNVGQRMIADMHKEGKTVEEIATRMKEALGQIRHGKSDRPVFTPEFLARIKRVIVFRPLDAAAMAGIARKQAAELRRSWAEGRNKRLELPDPLVAYVGAAARRLDERANGKEGGRVVRKLVAEWIEAPLQRAMAADPEGYRRAAAVVIACDPPADPAADQPYPPPEVTVRFEPTDPPSTVVRDS

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Crispr_ID: NZ_CP053452_37

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053452_37

9827214-9827363

Orphan

Consensus_repeat	Method
CCCGCACCACCTACGCCTACGAC	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP053452_37

>merge|NZ_CP053452|37|9827214-9827363|CRISPRCasFinder
AGCGCACCACCACCATCTACGACGCTGCCGGCCAAACCGTCGGCACCATCGACCCGCTGTTGCGCCGCACCTCGACGGCCTACGACCTCGCGGGCCGGTCCCTGGCCGCGATCAACGCCCTGTTGCAGCGCACCACCACCGTGTACGACG

>NZ_CP053452|37|36|9827214-9827363|CRISPRCasFinder
AGCGCACCACCACCATCTACGAC	GCTGCCGGCCAAACCGTCGGCACCATCGACCCGCTGTTGC
GCCGCACCTCGACGGCCTACGAC	CTCGCGGGCCGGTCCCTGGCCGCGATCAACGCCCTGTTGC
AGCGCACCACCACCGTGTACGACG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053452.1\|WP_171475896.1\|9815226_9815775_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225843
NZ_CP053452.1\|WP_171475897.1\|9816167_9816377_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171475898.1\|9817893_9818166_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171475893.1\|9811800_9812997_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|366154
NZ_CP053452.1\|WP_171475892.1\|9809600_9811091_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|366154
NZ_CP053452.1\|WP_171475895.1\|9814656_9815217_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171475894.1\|9813009_9813789_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|372681
NZ_CP053452.1\|WP_171475899.1\|9818855_9819668_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|340821
NZ_CP053452.1\|WP_171475890.1\|9807281_9808970_-\|ATP-dependent-Clp-protease-ATP-binding-subunit	unknown	unknown	gnl\|CDD\|223616
NZ_CP053452.1\|WP_171475891.1\|9808962_9809217_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP053452.1\|WP_171475896.1\|9815226_9815775_-\|hypothetical-protein	gnl\|CDD\|225843	COG3306, COG3306, Glycosyltransferase involved in LPS biosynthesis [Cell envelope biogenesis, outer membrane].	0.00302233
NZ_CP053452.1\|WP_171475893.1\|9811800_9812997_-\|glycosyltransferase	gnl\|CDD\|366154	pfam00535, Glycos_transf_2, Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.	8.46344e-08
NZ_CP053452.1\|WP_171475892.1\|9809600_9811091_-\|glycosyltransferase	gnl\|CDD\|366154	pfam00535, Glycos_transf_2, Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.	4.0915e-14
NZ_CP053452.1\|WP_171475899.1\|9818855_9819668_+\|hypothetical-protein	gnl\|CDD\|340821	cd03789, GT9_LPS_heptosyltransferase, lipopolysaccharide heptosyltransferase and similar proteins. Lipopolysaccharide heptosyltransferase (2.4.99.B6) is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family also contains lipopolysaccharide 1,2-N-acetylglucosaminetransferase EC 2.4.1.56 and belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.	0.00124904
NZ_CP053452.1\|WP_171475890.1\|9807281_9808970_-\|ATP-dependent-Clp-protease-ATP-binding-subunit	gnl\|CDD\|223616	COG0542, clpA, ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones].	1.95206e-77
NZ_CP053452.1\|WP_171475894.1\|9813009_9813789_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|372681	pfam13704, Glyco_tranf_2_4, Glycosyl transferase family 2. Members of this family of prokaryotic proteins include putative glucosyltransferases,.	3.18117e-12

>NZ_CP053452.1|WP_171475899.1|9818855_9819668_+|hypothetical-protein
MIDRGECGSCVAKWVYACDVYGRCSPHGWHAGVKRCDGCVHRADRGSEQPDPDVRRAVLLYEGGTSDALVLSAAIESLHRAHPGRFVTAVAGPGAELFDHNPHVVTAEPVIDRAPVAWERLAVPGTPDECPLDALRDSCNALGAALGVPVPLAVDRPCVYLSPDERGRAPQVPEGTGGSPRSWLVDGGGGDEGPAGRWTAADLPRVAELVGDRVRIVPIGAAGTDQRELARAVWHAAGARAGGTPTAPVRRVREAVCVRRRGAGRRGVPD
>NZ_CP053452.1|WP_171475898.1|9817893_9818166_-|hypothetical-protein
MLRIRLDELEDEDLAPIRLDELEVDELTWLDELEEDELTWLDELEEDEPKRLDEIKDDVLPLIGDPLDEGQLQLELDPPAYAVTMTWRVV
>NZ_CP053452.1|WP_171475897.1|9816167_9816377_+|hypothetical-protein
MSARCRAGRGAGIDDEPAVPSDQVEIGAAVGDHHAILRPEVFGRERLARQRFRSGPRPDRGSVGRCGSL
>NZ_CP053452.1|WP_171475896.1|9815226_9815775_-|hypothetical-protein
MQSHRQVLERAISDQVGALLVLEDDACFRPGFRQEVERFLAAAPDDWDQLMLGGQHMATPRAAGPGVVRCVNCQRTHAYAIRGPFLRHLYSRWCAASGHCDHIMGPMQGGYRVYAPDPFLVGQAQGPSDISGARNPAKFWVPPSADAAIALVRGPARSWRPSGGAACTPATTATRPRGSTAA
>NZ_CP053452.1|WP_171475895.1|9814656_9815217_-|hypothetical-protein
MPTPTRGAPLAAWVEMIAWEVASGNGRVGAVWHPAATPEVLRAAAPTRPVRVVEALTVEAGLRALPELTPVCPVPPVVLLRAPQAVVAELRERGWHTGYWRDPVTDLDNGLRELLMFTSDARRARLAALVEVLADEVEQIPNGVPVVWHPEVTAAELRAVTDRPVLEIRAEGTDEALAAWAAHGHA
>NZ_CP053452.1|WP_171475894.1|9813009_9813789_-|glycosyltransferase-family-2-protein
MHYLSVCAIVRNEARYLPEWVEFHRLVGVEHFYVYDDDSEVPVAVSLAAQIAAGYVTVEAVPGRGQHMQVYNRHGEQRRYDSMWTAFIDGDEFLVPHEGDDLRPLLSEFESEYAGLVVNWQVFGTSGHLLRPTGLLTEVMTHKLPVHAEINRHVKSIIQTTKLRHFPHPHRPVMHDGCHLCNEHRTYAPGPWLDVSVDRVQINHYYAKSLLDWGDKMRRGYADGSPPQHLWGVYDVDAACAEHDACAVRFADRLRARLC
>NZ_CP053452.1|WP_171475893.1|9811800_9812997_-|glycosyltransferase
MPPPSFLYRGLACQQHPAVPGVMARVLADLRPARVLEIGTAEGGFAPCLRDALDGSGLTAVPVLSYDLVARGGHAAVRAAGVDVRVQPVFGPSHRAVDARVAEYVRSPGPSLVLCDGGQKIKEFAALAPLLKTGDVIGAHDYAPNWDHFVRHVRGRTWDRLAFTDAAAVGPAATCGLTSWRPDDLGPVNWLWMRKTAAGRPALAPHPSGVTVCLATIPPRRTLLLRALESVASQTVRPEAVVVVCDYGREGAARTKTRTLEQVRTQWVTFLDDDDQMFPHHVELLLNHARASGADVAYSSAEVVAPDGRVLPNAEGWGRYGLPFDAQRLREISYIQTPALMRTERARSVGGFAAIGDSPHDEWNMYRAILDAGGTFSHLPRRTWRWHHWGGNTGGKAP
>NZ_CP053452.1|WP_171475892.1|9809600_9811091_-|glycosyltransferase
MSLEVVRTDPNVQHYETFAMLEIERLAKQEWVHDPILYLHTKGVSAPHDLGKKWWRLVMQEHLVRRWREHIPHLHSGYDAVGVNWHTHGEQHFSGTFWLASPDWIRRLPDFVAYHHAKGLTRYSCEMWIGAAQWCRAYSLACAGHDFCNPDYDFFALLPDWSQWAAERAEVVTWSREQAERERLPGPSLVVSFADSTDQFPTFRDAARVVARLDLLAHDATDRHGLVVPPSAEQARSILDFVRGNKRSPFIVMQCEKGIGRSRAAAAGVLWCRGEKQRAQAIMDMGTHNRALCRYICEAGGCPLPAEELVSVVARVKYSPDRLLGLILCLQRQRHQNWELVAVTDGPDLAAVELVESIAARGEKRVRVIVTPEPRGRWGHPYRQVGIDAAKGDWIALTNDDNYYVPGWLEQMLIAGRDADVVLCDTLHSYFGWRVYPTGPQPGGADLGCCMARAAVARAVPWPGDDPLADGRFIQSLAAQAGSRLGHVSRPLFVHN
>NZ_CP053452.1|WP_171475891.1|9808962_9809217_+|hypothetical-protein
MPTPRLADEQRVRVLAAVQGAGQGVEQVVEQRVAGVRGAAAHPRPARVPGEVVRCGDLAREQDRGVGVGRSGRGGIGHRRSPRA
>NZ_CP053452.1|WP_171475890.1|9807281_9808970_-|ATP-dependent-Clp-protease-ATP-binding-subunit
MGKSTLVAEFARRAAHDRGFLAAKRVLAVDARHTPPTRPAPKLTAVLEHTAPHADLVVCLDGLHELLLPAHRESNRPVLLAALARARCHLVAPLTPREFDDLAPDDPAFAEFFSVVYAPEPDPETALRVMHYFARGLAERYRVPVEPEAVRRAVALTANYVLNDQLPAKALKVLTAACEGADYDRRQLGRPVERVTADDVVRVVSDRTGIPADTLRGVADRTDYAAALGEVVFGQDHAVREVATELGLIKAGMTDPTKPASVLLLLGQTGTGKTEMAKALARFYSTSKRLKTYTLGNCVEAHSVATIIGVPPGYVGSDRGGRLVTELNADPYGVFLLDEADKAHPDVLQPFLNLFDEGWVTDQRGAKAHAQKSIFVLTTNVGQRMIADMHKEGKTVEEIATRMKEALGQIRHGKSDRPVFTPEFLARIKRVIVFRPLDAAAMAGIARKQAAELRRSWAEGRNKRLELPDPLVAYVGAAARRLDERANGKEGGRVVRKLVAEWIEAPLQRAMAADPEGYRRAAAVVIACDPPADPAADQPYPPPEVTVRFEPTDPPSTVVRDS

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Crispr_ID: NZ_CP053452_38

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053452_38

9827466-9827615

Orphan

Consensus_repeat	Method
CCCGCACCACCTACGCCTACGAC	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP053452_38

>merge|NZ_CP053452|38|9827466-9827615|CRISPRCasFinder
ACCGCACCACCACGGCCTACGACGCCGCCGGACAGACCGTCGGCACCATCGACGCCCTGTTGCGCCGCACCAGTACGGCCTACGACCGGGCCGGCCGCGCCCTGGCCTCCATCAACGGGCTGGGCCAGCGCACCACCACCGCCTACGACG

>NZ_CP053452|38|37|9827466-9827615|CRISPRCasFinder
ACCGCACCACCACGGCCTACGAC	GCCGCCGGACAGACCGTCGGCACCATCGACGCCCTGTTGC
GCCGCACCAGTACGGCCTACGAC	CGGGCCGGCCGCGCCCTGGCCTCCATCAACGGGCTGGGCC
AGCGCACCACCACCGCCTACGACG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053452.1\|WP_171475896.1\|9815226_9815775_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225843
NZ_CP053452.1\|WP_171475897.1\|9816167_9816377_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171475898.1\|9817893_9818166_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171475893.1\|9811800_9812997_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|366154
NZ_CP053452.1\|WP_171475892.1\|9809600_9811091_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|366154
NZ_CP053452.1\|WP_171475895.1\|9814656_9815217_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171475894.1\|9813009_9813789_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|372681
NZ_CP053452.1\|WP_171475899.1\|9818855_9819668_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|340821
NZ_CP053452.1\|WP_171475890.1\|9807281_9808970_-\|ATP-dependent-Clp-protease-ATP-binding-subunit	unknown	unknown	gnl\|CDD\|223616
NZ_CP053452.1\|WP_171475891.1\|9808962_9809217_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP053452.1\|WP_171475896.1\|9815226_9815775_-\|hypothetical-protein	gnl\|CDD\|225843	COG3306, COG3306, Glycosyltransferase involved in LPS biosynthesis [Cell envelope biogenesis, outer membrane].	0.00302233
NZ_CP053452.1\|WP_171475893.1\|9811800_9812997_-\|glycosyltransferase	gnl\|CDD\|366154	pfam00535, Glycos_transf_2, Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.	8.46344e-08
NZ_CP053452.1\|WP_171475892.1\|9809600_9811091_-\|glycosyltransferase	gnl\|CDD\|366154	pfam00535, Glycos_transf_2, Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.	4.0915e-14
NZ_CP053452.1\|WP_171475899.1\|9818855_9819668_+\|hypothetical-protein	gnl\|CDD\|340821	cd03789, GT9_LPS_heptosyltransferase, lipopolysaccharide heptosyltransferase and similar proteins. Lipopolysaccharide heptosyltransferase (2.4.99.B6) is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family also contains lipopolysaccharide 1,2-N-acetylglucosaminetransferase EC 2.4.1.56 and belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.	0.00124904
NZ_CP053452.1\|WP_171475890.1\|9807281_9808970_-\|ATP-dependent-Clp-protease-ATP-binding-subunit	gnl\|CDD\|223616	COG0542, clpA, ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones].	1.95206e-77
NZ_CP053452.1\|WP_171475894.1\|9813009_9813789_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|372681	pfam13704, Glyco_tranf_2_4, Glycosyl transferase family 2. Members of this family of prokaryotic proteins include putative glucosyltransferases,.	3.18117e-12

>NZ_CP053452.1|WP_171475899.1|9818855_9819668_+|hypothetical-protein
MIDRGECGSCVAKWVYACDVYGRCSPHGWHAGVKRCDGCVHRADRGSEQPDPDVRRAVLLYEGGTSDALVLSAAIESLHRAHPGRFVTAVAGPGAELFDHNPHVVTAEPVIDRAPVAWERLAVPGTPDECPLDALRDSCNALGAALGVPVPLAVDRPCVYLSPDERGRAPQVPEGTGGSPRSWLVDGGGGDEGPAGRWTAADLPRVAELVGDRVRIVPIGAAGTDQRELARAVWHAAGARAGGTPTAPVRRVREAVCVRRRGAGRRGVPD
>NZ_CP053452.1|WP_171475898.1|9817893_9818166_-|hypothetical-protein
MLRIRLDELEDEDLAPIRLDELEVDELTWLDELEEDELTWLDELEEDEPKRLDEIKDDVLPLIGDPLDEGQLQLELDPPAYAVTMTWRVV
>NZ_CP053452.1|WP_171475897.1|9816167_9816377_+|hypothetical-protein
MSARCRAGRGAGIDDEPAVPSDQVEIGAAVGDHHAILRPEVFGRERLARQRFRSGPRPDRGSVGRCGSL
>NZ_CP053452.1|WP_171475896.1|9815226_9815775_-|hypothetical-protein
MQSHRQVLERAISDQVGALLVLEDDACFRPGFRQEVERFLAAAPDDWDQLMLGGQHMATPRAAGPGVVRCVNCQRTHAYAIRGPFLRHLYSRWCAASGHCDHIMGPMQGGYRVYAPDPFLVGQAQGPSDISGARNPAKFWVPPSADAAIALVRGPARSWRPSGGAACTPATTATRPRGSTAA
>NZ_CP053452.1|WP_171475895.1|9814656_9815217_-|hypothetical-protein
MPTPTRGAPLAAWVEMIAWEVASGNGRVGAVWHPAATPEVLRAAAPTRPVRVVEALTVEAGLRALPELTPVCPVPPVVLLRAPQAVVAELRERGWHTGYWRDPVTDLDNGLRELLMFTSDARRARLAALVEVLADEVEQIPNGVPVVWHPEVTAAELRAVTDRPVLEIRAEGTDEALAAWAAHGHA
>NZ_CP053452.1|WP_171475894.1|9813009_9813789_-|glycosyltransferase-family-2-protein
MHYLSVCAIVRNEARYLPEWVEFHRLVGVEHFYVYDDDSEVPVAVSLAAQIAAGYVTVEAVPGRGQHMQVYNRHGEQRRYDSMWTAFIDGDEFLVPHEGDDLRPLLSEFESEYAGLVVNWQVFGTSGHLLRPTGLLTEVMTHKLPVHAEINRHVKSIIQTTKLRHFPHPHRPVMHDGCHLCNEHRTYAPGPWLDVSVDRVQINHYYAKSLLDWGDKMRRGYADGSPPQHLWGVYDVDAACAEHDACAVRFADRLRARLC
>NZ_CP053452.1|WP_171475893.1|9811800_9812997_-|glycosyltransferase
MPPPSFLYRGLACQQHPAVPGVMARVLADLRPARVLEIGTAEGGFAPCLRDALDGSGLTAVPVLSYDLVARGGHAAVRAAGVDVRVQPVFGPSHRAVDARVAEYVRSPGPSLVLCDGGQKIKEFAALAPLLKTGDVIGAHDYAPNWDHFVRHVRGRTWDRLAFTDAAAVGPAATCGLTSWRPDDLGPVNWLWMRKTAAGRPALAPHPSGVTVCLATIPPRRTLLLRALESVASQTVRPEAVVVVCDYGREGAARTKTRTLEQVRTQWVTFLDDDDQMFPHHVELLLNHARASGADVAYSSAEVVAPDGRVLPNAEGWGRYGLPFDAQRLREISYIQTPALMRTERARSVGGFAAIGDSPHDEWNMYRAILDAGGTFSHLPRRTWRWHHWGGNTGGKAP
>NZ_CP053452.1|WP_171475892.1|9809600_9811091_-|glycosyltransferase
MSLEVVRTDPNVQHYETFAMLEIERLAKQEWVHDPILYLHTKGVSAPHDLGKKWWRLVMQEHLVRRWREHIPHLHSGYDAVGVNWHTHGEQHFSGTFWLASPDWIRRLPDFVAYHHAKGLTRYSCEMWIGAAQWCRAYSLACAGHDFCNPDYDFFALLPDWSQWAAERAEVVTWSREQAERERLPGPSLVVSFADSTDQFPTFRDAARVVARLDLLAHDATDRHGLVVPPSAEQARSILDFVRGNKRSPFIVMQCEKGIGRSRAAAAGVLWCRGEKQRAQAIMDMGTHNRALCRYICEAGGCPLPAEELVSVVARVKYSPDRLLGLILCLQRQRHQNWELVAVTDGPDLAAVELVESIAARGEKRVRVIVTPEPRGRWGHPYRQVGIDAAKGDWIALTNDDNYYVPGWLEQMLIAGRDADVVLCDTLHSYFGWRVYPTGPQPGGADLGCCMARAAVARAVPWPGDDPLADGRFIQSLAAQAGSRLGHVSRPLFVHN
>NZ_CP053452.1|WP_171475891.1|9808962_9809217_+|hypothetical-protein
MPTPRLADEQRVRVLAAVQGAGQGVEQVVEQRVAGVRGAAAHPRPARVPGEVVRCGDLAREQDRGVGVGRSGRGGIGHRRSPRA
>NZ_CP053452.1|WP_171475890.1|9807281_9808970_-|ATP-dependent-Clp-protease-ATP-binding-subunit
MGKSTLVAEFARRAAHDRGFLAAKRVLAVDARHTPPTRPAPKLTAVLEHTAPHADLVVCLDGLHELLLPAHRESNRPVLLAALARARCHLVAPLTPREFDDLAPDDPAFAEFFSVVYAPEPDPETALRVMHYFARGLAERYRVPVEPEAVRRAVALTANYVLNDQLPAKALKVLTAACEGADYDRRQLGRPVERVTADDVVRVVSDRTGIPADTLRGVADRTDYAAALGEVVFGQDHAVREVATELGLIKAGMTDPTKPASVLLLLGQTGTGKTEMAKALARFYSTSKRLKTYTLGNCVEAHSVATIIGVPPGYVGSDRGGRLVTELNADPYGVFLLDEADKAHPDVLQPFLNLFDEGWVTDQRGAKAHAQKSIFVLTTNVGQRMIADMHKEGKTVEEIATRMKEALGQIRHGKSDRPVFTPEFLARIKRVIVFRPLDAAAMAGIARKQAAELRRSWAEGRNKRLELPDPLVAYVGAAARRLDERANGKEGGRVVRKLVAEWIEAPLQRAMAADPEGYRRAAAVVIACDPPADPAADQPYPPPEVTVRFEPTDPPSTVVRDS

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Crispr_ID: NZ_CP053452_40

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053452_40

9827907-9828056

Orphan

Consensus_repeat	Method
CCCGCACCACCTACGCCTACGAC	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP053452_40

>merge|NZ_CP053452|40|9827907-9828056|CRISPRCasFinder
GCCGCAGCACCTTCGGGTACGACCGCGCCGGCCGCCGCACCCTGGACCTGGACGCCCGCGGGGCCCGGGTCACCACCGCCTACGATGGGGCCGGGCAGAAGGTGGCCGAGACCCTGTCCTCGGGCACCCGGGGCACGTTCGCCTACGACA

>NZ_CP053452|40|39|9827907-9828056|CRISPRCasFinder
GCCGCAGCACCTTCGGGTACGAC	CGCGCCGGCCGCCGCACCCTGGACCTGGACGCCCGCGGGG
CCCGGGTCACCACCGCCTACGAT	GGGGCCGGGCAGAAGGTGGCCGAGACCCTGTCCTCGGGCA
CCCGGGGCACGTTCGCCTACGACA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053452.1\|WP_171475896.1\|9815226_9815775_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225843
NZ_CP053452.1\|WP_171475897.1\|9816167_9816377_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171475898.1\|9817893_9818166_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171475893.1\|9811800_9812997_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|366154
NZ_CP053452.1\|WP_171475892.1\|9809600_9811091_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|366154
NZ_CP053452.1\|WP_171475895.1\|9814656_9815217_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171475894.1\|9813009_9813789_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|372681
NZ_CP053452.1\|WP_171475899.1\|9818855_9819668_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|340821
NZ_CP053452.1\|WP_171475890.1\|9807281_9808970_-\|ATP-dependent-Clp-protease-ATP-binding-subunit	unknown	unknown	gnl\|CDD\|223616
NZ_CP053452.1\|WP_171475891.1\|9808962_9809217_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP053452.1\|WP_171475896.1\|9815226_9815775_-\|hypothetical-protein	gnl\|CDD\|225843	COG3306, COG3306, Glycosyltransferase involved in LPS biosynthesis [Cell envelope biogenesis, outer membrane].	0.00302233
NZ_CP053452.1\|WP_171475893.1\|9811800_9812997_-\|glycosyltransferase	gnl\|CDD\|366154	pfam00535, Glycos_transf_2, Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.	8.46344e-08
NZ_CP053452.1\|WP_171475892.1\|9809600_9811091_-\|glycosyltransferase	gnl\|CDD\|366154	pfam00535, Glycos_transf_2, Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.	4.0915e-14
NZ_CP053452.1\|WP_171475899.1\|9818855_9819668_+\|hypothetical-protein	gnl\|CDD\|340821	cd03789, GT9_LPS_heptosyltransferase, lipopolysaccharide heptosyltransferase and similar proteins. Lipopolysaccharide heptosyltransferase (2.4.99.B6) is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family also contains lipopolysaccharide 1,2-N-acetylglucosaminetransferase EC 2.4.1.56 and belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.	0.00124904
NZ_CP053452.1\|WP_171475890.1\|9807281_9808970_-\|ATP-dependent-Clp-protease-ATP-binding-subunit	gnl\|CDD\|223616	COG0542, clpA, ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones].	1.95206e-77
NZ_CP053452.1\|WP_171475894.1\|9813009_9813789_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|372681	pfam13704, Glyco_tranf_2_4, Glycosyl transferase family 2. Members of this family of prokaryotic proteins include putative glucosyltransferases,.	3.18117e-12

>NZ_CP053452.1|WP_171475899.1|9818855_9819668_+|hypothetical-protein
MIDRGECGSCVAKWVYACDVYGRCSPHGWHAGVKRCDGCVHRADRGSEQPDPDVRRAVLLYEGGTSDALVLSAAIESLHRAHPGRFVTAVAGPGAELFDHNPHVVTAEPVIDRAPVAWERLAVPGTPDECPLDALRDSCNALGAALGVPVPLAVDRPCVYLSPDERGRAPQVPEGTGGSPRSWLVDGGGGDEGPAGRWTAADLPRVAELVGDRVRIVPIGAAGTDQRELARAVWHAAGARAGGTPTAPVRRVREAVCVRRRGAGRRGVPD
>NZ_CP053452.1|WP_171475898.1|9817893_9818166_-|hypothetical-protein
MLRIRLDELEDEDLAPIRLDELEVDELTWLDELEEDELTWLDELEEDEPKRLDEIKDDVLPLIGDPLDEGQLQLELDPPAYAVTMTWRVV
>NZ_CP053452.1|WP_171475897.1|9816167_9816377_+|hypothetical-protein
MSARCRAGRGAGIDDEPAVPSDQVEIGAAVGDHHAILRPEVFGRERLARQRFRSGPRPDRGSVGRCGSL
>NZ_CP053452.1|WP_171475896.1|9815226_9815775_-|hypothetical-protein
MQSHRQVLERAISDQVGALLVLEDDACFRPGFRQEVERFLAAAPDDWDQLMLGGQHMATPRAAGPGVVRCVNCQRTHAYAIRGPFLRHLYSRWCAASGHCDHIMGPMQGGYRVYAPDPFLVGQAQGPSDISGARNPAKFWVPPSADAAIALVRGPARSWRPSGGAACTPATTATRPRGSTAA
>NZ_CP053452.1|WP_171475895.1|9814656_9815217_-|hypothetical-protein
MPTPTRGAPLAAWVEMIAWEVASGNGRVGAVWHPAATPEVLRAAAPTRPVRVVEALTVEAGLRALPELTPVCPVPPVVLLRAPQAVVAELRERGWHTGYWRDPVTDLDNGLRELLMFTSDARRARLAALVEVLADEVEQIPNGVPVVWHPEVTAAELRAVTDRPVLEIRAEGTDEALAAWAAHGHA
>NZ_CP053452.1|WP_171475894.1|9813009_9813789_-|glycosyltransferase-family-2-protein
MHYLSVCAIVRNEARYLPEWVEFHRLVGVEHFYVYDDDSEVPVAVSLAAQIAAGYVTVEAVPGRGQHMQVYNRHGEQRRYDSMWTAFIDGDEFLVPHEGDDLRPLLSEFESEYAGLVVNWQVFGTSGHLLRPTGLLTEVMTHKLPVHAEINRHVKSIIQTTKLRHFPHPHRPVMHDGCHLCNEHRTYAPGPWLDVSVDRVQINHYYAKSLLDWGDKMRRGYADGSPPQHLWGVYDVDAACAEHDACAVRFADRLRARLC
>NZ_CP053452.1|WP_171475893.1|9811800_9812997_-|glycosyltransferase
MPPPSFLYRGLACQQHPAVPGVMARVLADLRPARVLEIGTAEGGFAPCLRDALDGSGLTAVPVLSYDLVARGGHAAVRAAGVDVRVQPVFGPSHRAVDARVAEYVRSPGPSLVLCDGGQKIKEFAALAPLLKTGDVIGAHDYAPNWDHFVRHVRGRTWDRLAFTDAAAVGPAATCGLTSWRPDDLGPVNWLWMRKTAAGRPALAPHPSGVTVCLATIPPRRTLLLRALESVASQTVRPEAVVVVCDYGREGAARTKTRTLEQVRTQWVTFLDDDDQMFPHHVELLLNHARASGADVAYSSAEVVAPDGRVLPNAEGWGRYGLPFDAQRLREISYIQTPALMRTERARSVGGFAAIGDSPHDEWNMYRAILDAGGTFSHLPRRTWRWHHWGGNTGGKAP
>NZ_CP053452.1|WP_171475892.1|9809600_9811091_-|glycosyltransferase
MSLEVVRTDPNVQHYETFAMLEIERLAKQEWVHDPILYLHTKGVSAPHDLGKKWWRLVMQEHLVRRWREHIPHLHSGYDAVGVNWHTHGEQHFSGTFWLASPDWIRRLPDFVAYHHAKGLTRYSCEMWIGAAQWCRAYSLACAGHDFCNPDYDFFALLPDWSQWAAERAEVVTWSREQAERERLPGPSLVVSFADSTDQFPTFRDAARVVARLDLLAHDATDRHGLVVPPSAEQARSILDFVRGNKRSPFIVMQCEKGIGRSRAAAAGVLWCRGEKQRAQAIMDMGTHNRALCRYICEAGGCPLPAEELVSVVARVKYSPDRLLGLILCLQRQRHQNWELVAVTDGPDLAAVELVESIAARGEKRVRVIVTPEPRGRWGHPYRQVGIDAAKGDWIALTNDDNYYVPGWLEQMLIAGRDADVVLCDTLHSYFGWRVYPTGPQPGGADLGCCMARAAVARAVPWPGDDPLADGRFIQSLAAQAGSRLGHVSRPLFVHN
>NZ_CP053452.1|WP_171475891.1|9808962_9809217_+|hypothetical-protein
MPTPRLADEQRVRVLAAVQGAGQGVEQVVEQRVAGVRGAAAHPRPARVPGEVVRCGDLAREQDRGVGVGRSGRGGIGHRRSPRA
>NZ_CP053452.1|WP_171475890.1|9807281_9808970_-|ATP-dependent-Clp-protease-ATP-binding-subunit
MGKSTLVAEFARRAAHDRGFLAAKRVLAVDARHTPPTRPAPKLTAVLEHTAPHADLVVCLDGLHELLLPAHRESNRPVLLAALARARCHLVAPLTPREFDDLAPDDPAFAEFFSVVYAPEPDPETALRVMHYFARGLAERYRVPVEPEAVRRAVALTANYVLNDQLPAKALKVLTAACEGADYDRRQLGRPVERVTADDVVRVVSDRTGIPADTLRGVADRTDYAAALGEVVFGQDHAVREVATELGLIKAGMTDPTKPASVLLLLGQTGTGKTEMAKALARFYSTSKRLKTYTLGNCVEAHSVATIIGVPPGYVGSDRGGRLVTELNADPYGVFLLDEADKAHPDVLQPFLNLFDEGWVTDQRGAKAHAQKSIFVLTTNVGQRMIADMHKEGKTVEEIATRMKEALGQIRHGKSDRPVFTPEFLARIKRVIVFRPLDAAAMAGIARKQAAELRRSWAEGRNKRLELPDPLVAYVGAAARRLDERANGKEGGRVVRKLVAEWIEAPLQRAMAADPEGYRRAAAVVIACDPPADPAADQPYPPPEVTVRFEPTDPPSTVVRDS

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Crispr_ID: NZ_CP053452_41

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053452_41

9828156-9828506

Orphan

Consensus_repeat	Method
CCCGCACCACCTACGCCTACGAC	CRISPRCasFinder

5 spacers

The CRISPR arrays of NZ_CP053452_41

>merge|NZ_CP053452|41|9828156-9828506|CRISPRCasFinder
AGCGGGTCAGTTACGCCTACGACCCGGCCGGGTGGCGCCGCGCCCTTCGTGACCCGGACGGCGGACGCACCACCTACACACACGACCCCGCGGGACAACTGGTCGGGCTCGCCAGCCCCCAGAACGGCCGCACCACCTTCGCCTACGACGCCGCCGGACGCGAGGCCGCCAAGCGCCTCGCCAACGGGGTCCGGGTGACCCACACCTACGACCCGGCGGGCCGGGTCACCGGGGTCGCCACCGCCGGCCCCGCCGGGCTCGTGCGGCGCCTCACCTACGCACTCGACCCCCTGGGCCGCCGGGCCGCCGTCGCCGCCTCCGACGGGGCCCGCACCACCTACGCCTACGACA

>NZ_CP053452|41|40|9828156-9828506|CRISPRCasFinder
AGCGGGTCAGTTACGCCTACGAC	CCGGCCGGGTGGCGCCGCGCCCTTCGTGACCCGGACGGCG
GACGCACCACCTACACACACGAC	CCCGCGGGACAACTGGTCGGGCTCGCCAGCCCCCAGAACG
GCCGCACCACCTTCGCCTACGAC	GCCGCCGGACGCGAGGCCGCCAAGCGCCTCGCCAACGGGG
TCCGGGTGACCCACACCTACGAC	CCGGCGGGCCGGGTCACCGGGGTCGCCACCGCCGGCCCCGCCGGGCTCGTGC
GGCGCCTCACCTACGCACTCGAC	CCCCTGGGCCGCCGGGCCGCCGTCGCCGCCTCCGACGGGG
CCCGCACCACCTACGCCTACGACA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053452.1\|WP_171475896.1\|9815226_9815775_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225843
NZ_CP053452.1\|WP_171475897.1\|9816167_9816377_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171475898.1\|9817893_9818166_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171475893.1\|9811800_9812997_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|366154
NZ_CP053452.1\|WP_171475892.1\|9809600_9811091_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|366154
NZ_CP053452.1\|WP_171475895.1\|9814656_9815217_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053452.1\|WP_171475894.1\|9813009_9813789_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|372681
NZ_CP053452.1\|WP_171475899.1\|9818855_9819668_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|340821
NZ_CP053452.1\|WP_171475890.1\|9807281_9808970_-\|ATP-dependent-Clp-protease-ATP-binding-subunit	unknown	unknown	gnl\|CDD\|223616
NZ_CP053452.1\|WP_171475891.1\|9808962_9809217_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP053452.1\|WP_171475896.1\|9815226_9815775_-\|hypothetical-protein	gnl\|CDD\|225843	COG3306, COG3306, Glycosyltransferase involved in LPS biosynthesis [Cell envelope biogenesis, outer membrane].	0.00302233
NZ_CP053452.1\|WP_171475893.1\|9811800_9812997_-\|glycosyltransferase	gnl\|CDD\|366154	pfam00535, Glycos_transf_2, Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.	8.46344e-08
NZ_CP053452.1\|WP_171475892.1\|9809600_9811091_-\|glycosyltransferase	gnl\|CDD\|366154	pfam00535, Glycos_transf_2, Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.	4.0915e-14
NZ_CP053452.1\|WP_171475899.1\|9818855_9819668_+\|hypothetical-protein	gnl\|CDD\|340821	cd03789, GT9_LPS_heptosyltransferase, lipopolysaccharide heptosyltransferase and similar proteins. Lipopolysaccharide heptosyltransferase (2.4.99.B6) is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family also contains lipopolysaccharide 1,2-N-acetylglucosaminetransferase EC 2.4.1.56 and belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.	0.00124904
NZ_CP053452.1\|WP_171475890.1\|9807281_9808970_-\|ATP-dependent-Clp-protease-ATP-binding-subunit	gnl\|CDD\|223616	COG0542, clpA, ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones].	1.95206e-77
NZ_CP053452.1\|WP_171475894.1\|9813009_9813789_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|372681	pfam13704, Glyco_tranf_2_4, Glycosyl transferase family 2. Members of this family of prokaryotic proteins include putative glucosyltransferases,.	3.18117e-12

>NZ_CP053452.1|WP_171475899.1|9818855_9819668_+|hypothetical-protein
MIDRGECGSCVAKWVYACDVYGRCSPHGWHAGVKRCDGCVHRADRGSEQPDPDVRRAVLLYEGGTSDALVLSAAIESLHRAHPGRFVTAVAGPGAELFDHNPHVVTAEPVIDRAPVAWERLAVPGTPDECPLDALRDSCNALGAALGVPVPLAVDRPCVYLSPDERGRAPQVPEGTGGSPRSWLVDGGGGDEGPAGRWTAADLPRVAELVGDRVRIVPIGAAGTDQRELARAVWHAAGARAGGTPTAPVRRVREAVCVRRRGAGRRGVPD
>NZ_CP053452.1|WP_171475898.1|9817893_9818166_-|hypothetical-protein
MLRIRLDELEDEDLAPIRLDELEVDELTWLDELEEDELTWLDELEEDEPKRLDEIKDDVLPLIGDPLDEGQLQLELDPPAYAVTMTWRVV
>NZ_CP053452.1|WP_171475897.1|9816167_9816377_+|hypothetical-protein
MSARCRAGRGAGIDDEPAVPSDQVEIGAAVGDHHAILRPEVFGRERLARQRFRSGPRPDRGSVGRCGSL
>NZ_CP053452.1|WP_171475896.1|9815226_9815775_-|hypothetical-protein
MQSHRQVLERAISDQVGALLVLEDDACFRPGFRQEVERFLAAAPDDWDQLMLGGQHMATPRAAGPGVVRCVNCQRTHAYAIRGPFLRHLYSRWCAASGHCDHIMGPMQGGYRVYAPDPFLVGQAQGPSDISGARNPAKFWVPPSADAAIALVRGPARSWRPSGGAACTPATTATRPRGSTAA
>NZ_CP053452.1|WP_171475895.1|9814656_9815217_-|hypothetical-protein
MPTPTRGAPLAAWVEMIAWEVASGNGRVGAVWHPAATPEVLRAAAPTRPVRVVEALTVEAGLRALPELTPVCPVPPVVLLRAPQAVVAELRERGWHTGYWRDPVTDLDNGLRELLMFTSDARRARLAALVEVLADEVEQIPNGVPVVWHPEVTAAELRAVTDRPVLEIRAEGTDEALAAWAAHGHA
>NZ_CP053452.1|WP_171475894.1|9813009_9813789_-|glycosyltransferase-family-2-protein
MHYLSVCAIVRNEARYLPEWVEFHRLVGVEHFYVYDDDSEVPVAVSLAAQIAAGYVTVEAVPGRGQHMQVYNRHGEQRRYDSMWTAFIDGDEFLVPHEGDDLRPLLSEFESEYAGLVVNWQVFGTSGHLLRPTGLLTEVMTHKLPVHAEINRHVKSIIQTTKLRHFPHPHRPVMHDGCHLCNEHRTYAPGPWLDVSVDRVQINHYYAKSLLDWGDKMRRGYADGSPPQHLWGVYDVDAACAEHDACAVRFADRLRARLC
>NZ_CP053452.1|WP_171475893.1|9811800_9812997_-|glycosyltransferase
MPPPSFLYRGLACQQHPAVPGVMARVLADLRPARVLEIGTAEGGFAPCLRDALDGSGLTAVPVLSYDLVARGGHAAVRAAGVDVRVQPVFGPSHRAVDARVAEYVRSPGPSLVLCDGGQKIKEFAALAPLLKTGDVIGAHDYAPNWDHFVRHVRGRTWDRLAFTDAAAVGPAATCGLTSWRPDDLGPVNWLWMRKTAAGRPALAPHPSGVTVCLATIPPRRTLLLRALESVASQTVRPEAVVVVCDYGREGAARTKTRTLEQVRTQWVTFLDDDDQMFPHHVELLLNHARASGADVAYSSAEVVAPDGRVLPNAEGWGRYGLPFDAQRLREISYIQTPALMRTERARSVGGFAAIGDSPHDEWNMYRAILDAGGTFSHLPRRTWRWHHWGGNTGGKAP
>NZ_CP053452.1|WP_171475892.1|9809600_9811091_-|glycosyltransferase
MSLEVVRTDPNVQHYETFAMLEIERLAKQEWVHDPILYLHTKGVSAPHDLGKKWWRLVMQEHLVRRWREHIPHLHSGYDAVGVNWHTHGEQHFSGTFWLASPDWIRRLPDFVAYHHAKGLTRYSCEMWIGAAQWCRAYSLACAGHDFCNPDYDFFALLPDWSQWAAERAEVVTWSREQAERERLPGPSLVVSFADSTDQFPTFRDAARVVARLDLLAHDATDRHGLVVPPSAEQARSILDFVRGNKRSPFIVMQCEKGIGRSRAAAAGVLWCRGEKQRAQAIMDMGTHNRALCRYICEAGGCPLPAEELVSVVARVKYSPDRLLGLILCLQRQRHQNWELVAVTDGPDLAAVELVESIAARGEKRVRVIVTPEPRGRWGHPYRQVGIDAAKGDWIALTNDDNYYVPGWLEQMLIAGRDADVVLCDTLHSYFGWRVYPTGPQPGGADLGCCMARAAVARAVPWPGDDPLADGRFIQSLAAQAGSRLGHVSRPLFVHN
>NZ_CP053452.1|WP_171475891.1|9808962_9809217_+|hypothetical-protein
MPTPRLADEQRVRVLAAVQGAGQGVEQVVEQRVAGVRGAAAHPRPARVPGEVVRCGDLAREQDRGVGVGRSGRGGIGHRRSPRA
>NZ_CP053452.1|WP_171475890.1|9807281_9808970_-|ATP-dependent-Clp-protease-ATP-binding-subunit
MGKSTLVAEFARRAAHDRGFLAAKRVLAVDARHTPPTRPAPKLTAVLEHTAPHADLVVCLDGLHELLLPAHRESNRPVLLAALARARCHLVAPLTPREFDDLAPDDPAFAEFFSVVYAPEPDPETALRVMHYFARGLAERYRVPVEPEAVRRAVALTANYVLNDQLPAKALKVLTAACEGADYDRRQLGRPVERVTADDVVRVVSDRTGIPADTLRGVADRTDYAAALGEVVFGQDHAVREVATELGLIKAGMTDPTKPASVLLLLGQTGTGKTEMAKALARFYSTSKRLKTYTLGNCVEAHSVATIIGVPPGYVGSDRGGRLVTELNADPYGVFLLDEADKAHPDVLQPFLNLFDEGWVTDQRGAKAHAQKSIFVLTTNVGQRMIADMHKEGKTVEEIATRMKEALGQIRHGKSDRPVFTPEFLARIKRVIVFRPLDAAAMAGIARKQAAELRRSWAEGRNKRLELPDPLVAYVGAAARRLDERANGKEGGRVVRKLVAEWIEAPLQRAMAADPEGYRRAAAVVIACDPPADPAADQPYPPPEVTVRFEPTDPPSTVVRDS

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Identity
NZ_CP053452_37	37.2\|9827300\|40\|NZ_CP053452\|CRISPRCasFinder	9827300-9827339	40	NZ_CP053452.1	9826922-9826961	1.0
NZ_CP053452_41	41.4\|9828368\|52\|NZ_CP053452\|CRISPRCasFinder	9828368-9828419	52	NZ_CP053452.1	18420-18471	1.0
NZ_CP053452_41	41.5\|9828443\|40\|NZ_CP053452\|CRISPRCasFinder	9828443-9828482	40	NZ_CP053452.1	18494-18533	1.0
NZ_CP053452_42	42.1\|9828632\|37\|NZ_CP053452\|CRISPRCasFinder	9828632-9828668	37	NZ_CP053452.1	18683-18719	1.0

1. spacer 37.2|9827300|40|NZ_CP053452|CRISPRCasFinder matches to position: 9826922-9826961, mismatch: 0, identity: 1.0

ctcgcgggccggtccctggccgcgatcaacgccctgttgc	CRISPR spacer
ctcgcgggccggtccctggccgcgatcaacgccctgttgc	Protospacer
****************************************

2. spacer 41.4|9828368|52|NZ_CP053452|CRISPRCasFinder matches to position: 18420-18471, mismatch: 0, identity: 1.0

ccggcgggccgggtcaccggggtcgccaccgccggccccgccgggctcgtgc	CRISPR spacer
ccggcgggccgggtcaccggggtcgccaccgccggccccgccgggctcgtgc	Protospacer
****************************************************

3. spacer 41.5|9828443|40|NZ_CP053452|CRISPRCasFinder matches to position: 18494-18533, mismatch: 0, identity: 1.0

cccctgggccgccgggccgccgtcgccgcctccgacgggg	CRISPR spacer
cccctgggccgccgggccgccgtcgccgcctccgacgggg	Protospacer
****************************************

4. spacer 42.1|9828632|37|NZ_CP053452|CRISPRCasFinder matches to position: 18683-18719, mismatch: 0, identity: 1.0

aacgccaaccagctgggccgcgagcagaccaacacgg	CRISPR spacer
aacgccaaccagctgggccgcgagcagaccaacacgg	Protospacer
*************************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP053452_15	15.2\|3094651\|21\|NZ_CP053452\|CRISPRCasFinder	3094651-3094671	21	NZ_CP031468	Paraburkholderia caffeinilytica strain CF1 plasmid p1, complete sequence	36692-36712	1	0.952
NZ_CP053452_14	14.1\|3003612\|28\|NZ_CP053452\|CRISPRCasFinder	3003612-3003639	28	KT588442	Mycobacterium phage LadyBird, complete genome	41701-41728	4	0.857
NZ_CP053452_10	10.25\|1912189\|35\|NZ_CP053452\|PILER-CR,CRISPRCasFinder,CRT	1912189-1912223	35	NZ_CP034813	Paracoccus sp. Arc7-R13 plasmid unnamed2, complete sequence	139480-139514	5	0.857
NZ_CP053452_14	14.1\|3003612\|28\|NZ_CP053452\|CRISPRCasFinder	3003612-3003639	28	NZ_CP015092	Pelagibaca abyssi strain JLT2014 plasmid pPABY3, complete sequence	457-484	5	0.821
NZ_CP053452_14	14.1\|3003612\|28\|NZ_CP053452\|CRISPRCasFinder	3003612-3003639	28	NZ_CP031601	Roseovarius indicus strain DSM 26383 plasmid pRIdsm_03, complete sequence	7545-7572	5	0.821
NZ_CP053452_14	14.1\|3003612\|28\|NZ_CP053452\|CRISPRCasFinder	3003612-3003639	28	NZ_CP014798	Salipiger profundus strain JLT2016 plasmid pTPRO2, complete sequence	108912-108939	5	0.821
NZ_CP053452_14	14.1\|3003612\|28\|NZ_CP053452\|CRISPRCasFinder	3003612-3003639	28	NZ_CP004395	Celeribacter indicus strain P73 plasmid pP73B, complete sequence	10317-10344	5	0.821
NZ_CP053452_14	14.1\|3003612\|28\|NZ_CP053452\|CRISPRCasFinder	3003612-3003639	28	NZ_CP012399	Chelatococcus sp. CO-6 plasmid pCO-6, complete sequence	525647-525674	5	0.821
NZ_CP053452_14	14.1\|3003612\|28\|NZ_CP053452\|CRISPRCasFinder	3003612-3003639	28	NZ_CP050081	Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b5, complete sequence	7565-7592	5	0.821
NZ_CP053452_14	14.1\|3003612\|28\|NZ_CP053452\|CRISPRCasFinder	3003612-3003639	28	NZ_CP021033	Rhizobium sp. NXC14 plasmid pRspNXC14c, complete sequence	121790-121817	5	0.821
NZ_CP053452_14	14.1\|3003612\|28\|NZ_CP053452\|CRISPRCasFinder	3003612-3003639	28	NZ_CP049731	Rhizobium leguminosarum strain A1 plasmid pRL12, complete sequence	7564-7591	5	0.821
NZ_CP053452_14	14.1\|3003612\|28\|NZ_CP053452\|CRISPRCasFinder	3003612-3003639	28	NC_007766	Rhizobium etli CFN 42 plasmid p42f, complete sequence	99441-99468	5	0.821
NZ_CP053452_14	14.1\|3003612\|28\|NZ_CP053452\|CRISPRCasFinder	3003612-3003639	28	NZ_CP006990	Rhizobium sp. IE4771 plasmid pRetIE4771d, complete sequence	102388-102415	5	0.821
NZ_CP053452_14	14.1\|3003612\|28\|NZ_CP053452\|CRISPRCasFinder	3003612-3003639	28	NZ_CP021029	Rhizobium sp. TAL182 plasmid pRetTAL182e, complete sequence	108299-108326	5	0.821
NZ_CP053452_14	14.1\|3003612\|28\|NZ_CP053452\|CRISPRCasFinder	3003612-3003639	28	NZ_CP013600	Rhizobium sp. N741 plasmid pRspN741e, complete sequence	102302-102329	5	0.821
NZ_CP053452_14	14.1\|3003612\|28\|NZ_CP053452\|CRISPRCasFinder	3003612-3003639	28	NZ_CP013504	Rhizobium esperanzae strain N561 plasmid pRspN561d, complete sequence	102302-102329	5	0.821
NZ_CP053452_14	14.1\|3003612\|28\|NZ_CP053452\|CRISPRCasFinder	3003612-3003639	28	NZ_AP014705	Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence	528314-528341	5	0.821
NZ_CP053452_14	14.1\|3003612\|28\|NZ_CP053452\|CRISPRCasFinder	3003612-3003639	28	NZ_CP013510	Rhizobium sp. N1341 plasmid pRspN1341e, complete sequence	102302-102329	5	0.821
NZ_CP053452_14	14.1\|3003612\|28\|NZ_CP053452\|CRISPRCasFinder	3003612-3003639	28	NZ_CP013521	Rhizobium sp. N113 plasmid pRspN113d, complete sequence	102302-102329	5	0.821
NZ_CP053452_14	14.1\|3003612\|28\|NZ_CP053452\|CRISPRCasFinder	3003612-3003639	28	NZ_CP021127	Rhizobium sp. Kim5 plasmid pRetKim5c, complete sequence	108667-108694	5	0.821
NZ_CP053452_14	14.1\|3003612\|28\|NZ_CP053452\|CRISPRCasFinder	3003612-3003639	28	NZ_CP013494	Rhizobium sp. N6212 plasmid pRspN6212d, complete sequence	102302-102329	5	0.821
NZ_CP053452_14	14.1\|3003612\|28\|NZ_CP053452\|CRISPRCasFinder	3003612-3003639	28	NZ_CP013515	Rhizobium sp. N1314 plasmid pRspN1314d, complete sequence	107977-108004	5	0.821
NZ_CP053452_14	14.1\|3003612\|28\|NZ_CP053452\|CRISPRCasFinder	3003612-3003639	28	NZ_CP013594	Rhizobium sp. N871 plasmid pRspN871d, complete sequence	102302-102329	5	0.821
NZ_CP053452_14	14.1\|3003612\|28\|NZ_CP053452\|CRISPRCasFinder	3003612-3003639	28	NC_017575	Ralstonia solanacearum Po82 megaplasmid, complete sequence	1899040-1899067	5	0.821
NZ_CP053452_14	14.1\|3003612\|28\|NZ_CP053452\|CRISPRCasFinder	3003612-3003639	28	NZ_CP026308	Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence	1898984-1899011	5	0.821
NZ_CP053452_14	14.1\|3003612\|28\|NZ_CP053452\|CRISPRCasFinder	3003612-3003639	28	CP007644	Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803c, complete sequence	102577-102604	5	0.821
NZ_CP053452_14	14.1\|3003612\|28\|NZ_CP053452\|CRISPRCasFinder	3003612-3003639	28	NZ_CP013605	Rhizobium sp. N731 plasmid pRspN731d, complete sequence	107971-107998	5	0.821
NZ_CP053452_14	14.1\|3003612\|28\|NZ_CP053452\|CRISPRCasFinder	3003612-3003639	28	NZ_CP020952	Rhizobium sp. CIAT894 plasmid pRheCIAT894e, complete sequence	311129-311156	5	0.821
NZ_CP053452_14	14.1\|3003612\|28\|NZ_CP053452\|CRISPRCasFinder	3003612-3003639	28	NZ_CP012940	Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence	121232-121259	5	0.821
NZ_CP053452_14	14.1\|3003612\|28\|NZ_CP053452\|CRISPRCasFinder	3003612-3003639	28	NZ_CP012944	Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence	3405-3432	5	0.821
NZ_CP053452_14	14.1\|3003612\|28\|NZ_CP053452\|CRISPRCasFinder	3003612-3003639	28	NZ_CP012944	Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence	2053050-2053077	5	0.821
NZ_CP053452_14	14.1\|3003612\|28\|NZ_CP053452\|CRISPRCasFinder	3003612-3003639	28	NZ_CP051295	Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence	120980-121007	5	0.821
NZ_CP053452_14	14.1\|3003612\|28\|NZ_CP053452\|CRISPRCasFinder	3003612-3003639	28	NZ_CP022565	Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK01, complete sequence	686946-686973	5	0.821
NZ_CP053452_3	3.1\|1427581\|31\|NZ_CP053452\|CRISPRCasFinder	1427581-1427611	31	NC_010311	Streptomyces sp. HK1 plasmid pSHK1, complete sequence	109669-109699	6	0.806
NZ_CP053452_14	14.1\|3003612\|28\|NZ_CP053452\|CRISPRCasFinder	3003612-3003639	28	NC_013858	Azospirillum sp. B510 plasmid pAB510d, complete sequence	124703-124730	6	0.786
NZ_CP053452_14	14.1\|3003612\|28\|NZ_CP053452\|CRISPRCasFinder	3003612-3003639	28	NZ_CP018096	Chelatococcus daeguensis strain TAD1 plasmid pTAD1, complete sequence	44377-44404	6	0.786
NZ_CP053452_30	30.1\|7237512\|32\|NZ_CP053452\|CRISPRCasFinder	7237512-7237543	32	MN329674	Mycobacterium phage JoieB, complete genome	39865-39896	6	0.812
NZ_CP053452_30	30.1\|7237512\|32\|NZ_CP053452\|CRISPRCasFinder	7237512-7237543	32	MH727562	Mycobacterium phage VasuNzinga, complete genome	38807-38838	6	0.812
NZ_CP053452_30	30.1\|7237512\|32\|NZ_CP053452\|CRISPRCasFinder	7237512-7237543	32	JF704100	Mycobacterium phage Marvin, complete sequence	39085-39116	6	0.812
NZ_CP053452_30	30.1\|7237512\|32\|NZ_CP053452\|CRISPRCasFinder	7237512-7237543	32	MN428056	Mycobacterium phage Pringar, complete genome	39233-39264	6	0.812
NZ_CP053452_3	3.1\|1427581\|31\|NZ_CP053452\|CRISPRCasFinder	1427581-1427611	31	NZ_CP021084	Deinococcus ficus strain CC-FR2-10 plasmid pDFI3, complete sequence	180958-180988	7	0.774
NZ_CP053452_9	9.17\|1905096\|35\|NZ_CP053452\|PILER-CR,CRISPRCasFinder,CRT	1905096-1905130	35	NZ_CP012399	Chelatococcus sp. CO-6 plasmid pCO-6, complete sequence	384051-384085	7	0.8
NZ_CP053452_9	9.17\|1905096\|35\|NZ_CP053452\|PILER-CR,CRISPRCasFinder,CRT	1905096-1905130	35	NZ_CP037915	Sphingomonas sp. AAP5 plasmid p150, complete sequence	95862-95896	7	0.8
NZ_CP053452_9	9.17\|1905096\|35\|NZ_CP053452\|PILER-CR,CRISPRCasFinder,CRT	1905096-1905130	35	MF959999	Marinobacter phage PS3, complete genome	6283-6317	7	0.8
NZ_CP053452_10	10.25\|1912189\|35\|NZ_CP053452\|PILER-CR,CRISPRCasFinder,CRT	1912189-1912223	35	NZ_CP040821	Paraoceanicella profunda strain D4M1 plasmid pD4M1C, complete sequence	31393-31427	7	0.8
NZ_CP053452_10	10.25\|1912189\|35\|NZ_CP053452\|PILER-CR,CRISPRCasFinder,CRT	1912189-1912223	35	NZ_LR134463	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 21, complete sequence	30887-30921	7	0.8
NZ_CP053452_14	14.1\|3003612\|28\|NZ_CP053452\|CRISPRCasFinder	3003612-3003639	28	NZ_CP032685	Rhizobium sp. CCGE531 plasmid pRCCGE531d, complete sequence	110620-110647	7	0.75
NZ_CP053452_14	14.1\|3003612\|28\|NZ_CP053452\|CRISPRCasFinder	3003612-3003639	28	NZ_CP032690	Rhizobium sp. CCGE532 plasmid pRCCGE532d, complete sequence	110620-110647	7	0.75
NZ_CP053452_14	14.1\|3003612\|28\|NZ_CP053452\|CRISPRCasFinder	3003612-3003639	28	NZ_AP014686	Bradyrhizobium diazoefficiens strain NK6 plasmid pNK6b, complete sequence	192135-192162	7	0.75
NZ_CP053452_22	22.1\|4489133\|29\|NZ_CP053452\|CRISPRCasFinder	4489133-4489161	29	MN694717	Marine virus AFVG_250M1062, complete genome	40697-40725	7	0.759
NZ_CP053452_22	22.1\|4489133\|29\|NZ_CP053452\|CRISPRCasFinder	4489133-4489161	29	MN693788	Marine virus AFVG_250M1061, complete genome	40722-40750	7	0.759
NZ_CP053452_22	22.1\|4489133\|29\|NZ_CP053452\|CRISPRCasFinder	4489133-4489161	29	MN694336	Marine virus AFVG_250M1063, complete genome	5836-5864	7	0.759
NZ_CP053452_9	9.5\|1904226\|34\|NZ_CP053452\|PILER-CR,CRISPRCasFinder,CRT	1904226-1904259	34	NC_020543	Sphingomonas sp. MM-1 plasmid pISP2, complete sequence	8339-8372	8	0.765
NZ_CP053452_9	9.5\|1904226\|34\|NZ_CP053452\|PILER-CR,CRISPRCasFinder,CRT	1904226-1904259	34	NZ_AP017657	Sphingobium cloacae strain JCM 10874 plasmid pSCLO_3, complete sequence	115700-115733	8	0.765
NZ_CP053452_9	9.5\|1904226\|34\|NZ_CP053452\|PILER-CR,CRISPRCasFinder,CRT	1904226-1904259	34	NZ_CP005191	Sphingobium sp. MI1205 plasmid pMI2, complete sequence	53050-53083	8	0.765
NZ_CP053452_9	9.5\|1904226\|34\|NZ_CP053452\|PILER-CR,CRISPRCasFinder,CRT	1904226-1904259	34	AP021850	Deinococcus grandis ATCC 43672 plasmid: pDEGR-1 DNA, complete genome	207055-207088	8	0.765
NZ_CP053452_9	9.17\|1905096\|35\|NZ_CP053452\|PILER-CR,CRISPRCasFinder,CRT	1905096-1905130	35	NC_010510	Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete sequence	464704-464738	8	0.771
NZ_CP053452_9	9.39\|1906702\|35\|NZ_CP053452\|PILER-CR,CRISPRCasFinder,CRT	1906702-1906736	35	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	3806552-3806586	8	0.771
NZ_CP053452_10	10.12\|1911246\|34\|NZ_CP053452\|PILER-CR,CRISPRCasFinder,CRT	1911246-1911279	34	NZ_CP013369	Burkholderia ubonensis strain RF23-BP41 plasmid pRF23, complete sequence	89355-89388	8	0.765
NZ_CP053452_10	10.25\|1912189\|35\|NZ_CP053452\|PILER-CR,CRISPRCasFinder,CRT	1912189-1912223	35	NZ_CP015746	Shinella sp. HZN7 plasmid pShin-10, complete sequence	23468-23502	8	0.771
NZ_CP053452_10	10.25\|1912189\|35\|NZ_CP053452\|PILER-CR,CRISPRCasFinder,CRT	1912189-1912223	35	NZ_CP029831	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed7, complete sequence	593925-593959	8	0.771
NZ_CP053452_20	20.2\|3913965\|33\|NZ_CP053452\|CRISPRCasFinder	3913965-3913997	33	MK686072	Streptomyces phage RosaAsantewaa, complete genome	9158-9190	8	0.758
NZ_CP053452_22	22.1\|4489133\|29\|NZ_CP053452\|CRISPRCasFinder	4489133-4489161	29	NC_008712	Paenarthrobacter aurescens TC1 plasmid pTC1, complete sequence	129731-129759	8	0.724
NZ_CP053452_30	30.1\|7237512\|32\|NZ_CP053452\|CRISPRCasFinder	7237512-7237543	32	MK937601	Gordonia phage Charming, complete genome	28180-28211	8	0.75
NZ_CP053452_30	30.1\|7237512\|32\|NZ_CP053452\|CRISPRCasFinder	7237512-7237543	32	MH976519	Gordonia phage Tangent, complete genome	28183-28214	8	0.75
NZ_CP053452_30	30.1\|7237512\|32\|NZ_CP053452\|CRISPRCasFinder	7237512-7237543	32	MH976510	Gordonia phage Fosterous, complete genome	28596-28627	8	0.75
NZ_CP053452_30	30.1\|7237512\|32\|NZ_CP053452\|CRISPRCasFinder	7237512-7237543	32	MH976518	Gordonia phage Stultus, complete genome	27746-27777	8	0.75
NZ_CP053452_30	30.1\|7237512\|32\|NZ_CP053452\|CRISPRCasFinder	7237512-7237543	32	MH479924	Gordonia phage Rofo, complete genome	28661-28692	8	0.75
NZ_CP053452_30	30.1\|7237512\|32\|NZ_CP053452\|CRISPRCasFinder	7237512-7237543	32	MK937594	Gordonia phage Galadriel, complete genome	29085-29116	8	0.75
NZ_CP053452_30	30.1\|7237512\|32\|NZ_CP053452\|CRISPRCasFinder	7237512-7237543	32	MN329673	Gordonia phage Jabberwocky, complete genome	29224-29255	8	0.75
NZ_CP053452_30	30.1\|7237512\|32\|NZ_CP053452\|CRISPRCasFinder	7237512-7237543	32	MT723934	Gordonia phage Love, complete genome	29595-29626	8	0.75
NZ_CP053452_30	30.1\|7237512\|32\|NZ_CP053452\|CRISPRCasFinder	7237512-7237543	32	MH651166	Gordonia phage Angelicage, complete genome	28923-28954	8	0.75
NZ_CP053452_30	30.1\|7237512\|32\|NZ_CP053452\|CRISPRCasFinder	7237512-7237543	32	MT639640	Gordonia phage Paries, complete genome	29263-29294	8	0.75
NZ_CP053452_30	30.1\|7237512\|32\|NZ_CP053452\|CRISPRCasFinder	7237512-7237543	32	MK977702	Gordonia terrae phage McKinley, complete genome	29630-29661	8	0.75
NZ_CP053452_30	30.1\|7237512\|32\|NZ_CP053452\|CRISPRCasFinder	7237512-7237543	32	NC_042108	Gordonia phage Brandonk123, complete genome	28671-28702	8	0.75
NZ_CP053452_30	30.1\|7237512\|32\|NZ_CP053452\|CRISPRCasFinder	7237512-7237543	32	MH976514	Gordonia phage Nordenberg, complete genome	27800-27831	8	0.75
NZ_CP053452_30	30.1\|7237512\|32\|NZ_CP053452\|CRISPRCasFinder	7237512-7237543	32	MH976508	Gordonia phage Bibwit, complete genome	28324-28355	8	0.75
NZ_CP053452_30	30.1\|7237512\|32\|NZ_CP053452\|CRISPRCasFinder	7237512-7237543	32	MH976506	Gordonia phage Affeca, complete genome	28506-28537	8	0.75
NZ_CP053452_30	30.1\|7237512\|32\|NZ_CP053452\|CRISPRCasFinder	7237512-7237543	32	MN329677	Gordonia phage Keitabear, complete genome	30032-30063	8	0.75
NZ_CP053452_30	30.1\|7237512\|32\|NZ_CP053452\|CRISPRCasFinder	7237512-7237543	32	MH976507	Gordonia phage Ailee, complete genome	29005-29036	8	0.75
NZ_CP053452_30	30.1\|7237512\|32\|NZ_CP053452\|CRISPRCasFinder	7237512-7237543	32	MT498035	Gordonia Phage Barsten, complete genome	28137-28168	8	0.75
NZ_CP053452_30	30.1\|7237512\|32\|NZ_CP053452\|CRISPRCasFinder	7237512-7237543	32	MH976512	Gordonia phage Geodirt, complete genome	28071-28102	8	0.75
NZ_CP053452_30	30.1\|7237512\|32\|NZ_CP053452\|CRISPRCasFinder	7237512-7237543	32	NC_031239	Gordonia phage Vivi2, complete genome	29353-29384	8	0.75
NZ_CP053452_9	9.5\|1904226\|34\|NZ_CP053452\|PILER-CR,CRISPRCasFinder,CRT	1904226-1904259	34	NZ_CP023738	Methylosinus trichosporium OB3b plasmid pOB3b1, complete sequence	253035-253068	9	0.735
NZ_CP053452_9	9.5\|1904226\|34\|NZ_CP053452\|PILER-CR,CRISPRCasFinder,CRT	1904226-1904259	34	NZ_CP014599	Yangia sp. CCB-MM3 plasmid unnamed3, complete sequence	217443-217476	9	0.735
NZ_CP053452_9	9.5\|1904226\|34\|NZ_CP053452\|PILER-CR,CRISPRCasFinder,CRT	1904226-1904259	34	NC_009669	Ochrobactrum anthropi ATCC 49188 plasmid pOANT01, complete sequence	25903-25936	9	0.735
NZ_CP053452_9	9.55\|1907866\|35\|NZ_CP053452\|PILER-CR,CRISPRCasFinder,CRT	1907866-1907900	35	NZ_CP009453	Sphingopyxis sp. 113P3 plasmid unnamed, complete sequence	76241-76275	9	0.743
NZ_CP053452_10	10.14\|1911389\|34\|NZ_CP053452\|PILER-CR,CRISPRCasFinder,CRT	1911389-1911422	34	NZ_CP045549	Streptomyces sp. SYP-A7193 plasmid unnamed2, complete sequence	4646-4679	9	0.735
NZ_CP053452_30	30.1\|7237512\|32\|NZ_CP053452\|CRISPRCasFinder	7237512-7237543	32	NC_011879	Pseudarthrobacter chlorophenolicus A6 plasmid pACHL01, complete sequence	371147-371178	9	0.719
NZ_CP053452_30	30.1\|7237512\|32\|NZ_CP053452\|CRISPRCasFinder	7237512-7237543	32	NZ_CP048398	Streptomyces sp. S4.7 plasmid pSSPS4.7a, complete sequence	6815-6846	9	0.719
NZ_CP053452_9	9.5\|1904226\|34\|NZ_CP053452\|PILER-CR,CRISPRCasFinder,CRT	1904226-1904259	34	MN234216	Streptomyces phage Gilgamesh, complete genome	127236-127269	10	0.706
NZ_CP053452_9	9.39\|1906702\|35\|NZ_CP053452\|PILER-CR,CRISPRCasFinder,CRT	1906702-1906736	35	MK875791	Gordonia phage Yakult, complete genome	25703-25737	10	0.714
NZ_CP053452_10	10.5\|1910738\|35\|NZ_CP053452\|PILER-CR,CRISPRCasFinder,CRT	1910738-1910772	35	CP002964	Emticicia oligotrophica DSM 17448 plasmid pEMTOL03, complete sequence	37634-37668	10	0.714
NZ_CP053452_10	10.11\|1911174\|36\|NZ_CP053452\|PILER-CR,CRISPRCasFinder,CRT	1911174-1911209	36	NZ_CP026091	Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence	414522-414557	10	0.722
NZ_CP053452_10	10.11\|1911174\|36\|NZ_CP053452\|PILER-CR,CRISPRCasFinder,CRT	1911174-1911209	36	NC_014309	Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome	591002-591037	10	0.722
NZ_CP053452_10	10.11\|1911174\|36\|NZ_CP053452\|PILER-CR,CRISPRCasFinder,CRT	1911174-1911209	36	NZ_CP021653	Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence	714690-714725	10	0.722
NZ_CP053452_10	10.11\|1911174\|36\|NZ_CP053452\|PILER-CR,CRISPRCasFinder,CRT	1911174-1911209	36	NZ_CP026093	Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence	414538-414573	10	0.722
NZ_CP053452_10	10.11\|1911174\|36\|NZ_CP053452\|PILER-CR,CRISPRCasFinder,CRT	1911174-1911209	36	NZ_CP021767	Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence	714683-714718	10	0.722
NZ_CP053452_10	10.11\|1911174\|36\|NZ_CP053452\|PILER-CR,CRISPRCasFinder,CRT	1911174-1911209	36	NZ_CP012688	Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence	714698-714733	10	0.722
NZ_CP053452_10	10.11\|1911174\|36\|NZ_CP053452\|PILER-CR,CRISPRCasFinder,CRT	1911174-1911209	36	NC_017575	Ralstonia solanacearum Po82 megaplasmid, complete sequence	414314-414349	10	0.722
NZ_CP053452_10	10.11\|1911174\|36\|NZ_CP053452\|PILER-CR,CRISPRCasFinder,CRT	1911174-1911209	36	NZ_CP021765	Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence	651408-651443	10	0.722
NZ_CP053452_10	10.11\|1911174\|36\|NZ_CP053452\|PILER-CR,CRISPRCasFinder,CRT	1911174-1911209	36	CP047139	Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence	733090-733125	10	0.722
NZ_CP053452_10	10.11\|1911174\|36\|NZ_CP053452\|PILER-CR,CRISPRCasFinder,CRT	1911174-1911209	36	CP047137	Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence	699310-699345	10	0.722
NZ_CP053452_10	10.11\|1911174\|36\|NZ_CP053452\|PILER-CR,CRISPRCasFinder,CRT	1911174-1911209	36	NZ_CP012940	Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence	1588024-1588059	10	0.722
NZ_CP053452_10	10.11\|1911174\|36\|NZ_CP053452\|PILER-CR,CRISPRCasFinder,CRT	1911174-1911209	36	NZ_CP012944	Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence	1459551-1459586	10	0.722
NZ_CP053452_10	10.11\|1911174\|36\|NZ_CP053452\|PILER-CR,CRISPRCasFinder,CRT	1911174-1911209	36	NZ_CP051295	Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence	1571488-1571523	10	0.722
NZ_CP053452_10	10.14\|1911389\|34\|NZ_CP053452\|PILER-CR,CRISPRCasFinder,CRT	1911389-1911422	34	NC_019894	Singulisphaera acidiphila DSM 18658 plasmid pSINAC02, complete sequence	31667-31700	10	0.706
NZ_CP053452_10	10.25\|1912189\|35\|NZ_CP053452\|PILER-CR,CRISPRCasFinder,CRT	1912189-1912223	35	NZ_CP022369	Azospirillum sp. TSH58 plasmid TSH58_p05, complete sequence	230224-230258	10	0.714
NZ_CP053452_10	10.25\|1912189\|35\|NZ_CP053452\|PILER-CR,CRISPRCasFinder,CRT	1912189-1912223	35	NZ_CP011667	Streptomyces sp. Mg1 plasmid pSMg1-3, complete sequence	45215-45249	10	0.714
NZ_CP053452_10	10.25\|1912189\|35\|NZ_CP053452\|PILER-CR,CRISPRCasFinder,CRT	1912189-1912223	35	NZ_CP033583	Streptomyces sp. ADI95-16 plasmid pADI95-16b, complete sequence	195143-195177	10	0.714
NZ_CP053452_30	30.1\|7237512\|32\|NZ_CP053452\|CRISPRCasFinder	7237512-7237543	32	NZ_CP032520	Cupriavidus oxalaticus strain T2 plasmid unnamed1, complete sequence	290945-290976	10	0.688
NZ_CP053452_40	40.2\|9827993\|40\|NZ_CP053452\|CRISPRCasFinder	9827993-9828032	40	NZ_CP026518	Deinococcus sp. NW-56 plasmid unnamed2, complete sequence	324876-324915	10	0.75
NZ_CP053452_10	10.30\|1912547\|36\|NZ_CP053452\|PILER-CR,CRISPRCasFinder,CRT	1912547-1912582	36	AB451219	Ralstonia phage RSB1 DNA, complete genome	12086-12121	11	0.694
NZ_CP053452_10	10.30\|1912547\|36\|NZ_CP053452\|PILER-CR,CRISPRCasFinder,CRT	1912547-1912582	36	NC_011201	Ralstonia phage RSB1, complete genome	12086-12121	11	0.694
NZ_CP053452_21	21.1\|4485216\|34\|NZ_CP053452\|CRISPRCasFinder	4485216-4485249	34	NZ_CP024314	Rhizobium sp. NXC24 plasmid pRspNXC24c, complete sequence	143205-143238	11	0.676
NZ_CP053452_26	26.4\|6434877\|38\|NZ_CP053452\|CRT,PILER-CR,CRISPRCasFinder	6434877-6434914	38	NZ_CP045385	Ruegeria sp. THAF33 plasmid pTHAF33_a, complete sequence	204143-204180	11	0.711
NZ_CP053452_26	26.4\|6434877\|38\|NZ_CP053452\|CRT,PILER-CR,CRISPRCasFinder	6434877-6434914	38	NZ_CP031947	Ruegeria sp. AD91A plasmid unnamed1, complete sequence	103642-103679	11	0.711
NZ_CP053452_9	9.42\|1906916\|38\|NZ_CP053452\|PILER-CR,CRISPRCasFinder,CRT	1906916-1906953	38	NC_008270	Rhodococcus jostii RHA1 plasmid pRHL2, complete sequence	306773-306810	12	0.684
NZ_CP053452_10	10.13\|1911316\|37\|NZ_CP053452\|PILER-CR,CRISPRCasFinder,CRT	1911316-1911352	37	NZ_CP013265	Sphingobium baderi strain DE-13 plasmid pDE1, complete sequence	35575-35611	13	0.649

1. spacer 15.2|3094651|21|NZ_CP053452|CRISPRCasFinder matches to NZ_CP031468 (Paraburkholderia caffeinilytica strain CF1 plasmid p1, complete sequence) position: , mismatch: 1, identity: 0.952

gttgccgtcgctcgatgtgcc	CRISPR spacer
gttgccgtcgctcgatgagcc	Protospacer
***************** ***

2. spacer 14.1|3003612|28|NZ_CP053452|CRISPRCasFinder matches to KT588442 (Mycobacterium phage LadyBird, complete genome) position: , mismatch: 4, identity: 0.857

gcgcgggcggtcgtcgtcatcatcctca	CRISPR spacer
gtcctggcggtcgtcgccatcatcctca	Protospacer
*. * ***********.***********

3. spacer 10.25|1912189|35|NZ_CP053452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034813 (Paracoccus sp. Arc7-R13 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.857

gtgagcgcggcgacgatggcggccgggttcaggac	CRISPR spacer
gcgcgcgcggcgacgatcgcggccgggtccagggc	Protospacer
*.* ************* **********.****.*

4. spacer 14.1|3003612|28|NZ_CP053452|CRISPRCasFinder matches to NZ_CP015092 (Pelagibaca abyssi strain JLT2014 plasmid pPABY3, complete sequence) position: , mismatch: 5, identity: 0.821

gcgcgggcggtcgtcgtcatcatcctca	CRISPR spacer
gccaccgcggtcgtcgtcatcatcctcg	Protospacer
**    *********************.

5. spacer 14.1|3003612|28|NZ_CP053452|CRISPRCasFinder matches to NZ_CP031601 (Roseovarius indicus strain DSM 26383 plasmid pRIdsm_03, complete sequence) position: , mismatch: 5, identity: 0.821

gcgcgggcggtcgtcgtcatcatcctca	CRISPR spacer
gccaccgcggtcgtcgtcatcatcctcg	Protospacer
**    *********************.

6. spacer 14.1|3003612|28|NZ_CP053452|CRISPRCasFinder matches to NZ_CP014798 (Salipiger profundus strain JLT2016 plasmid pTPRO2, complete sequence) position: , mismatch: 5, identity: 0.821

gcgcgggcggtcgtcgtcatcatcctca	CRISPR spacer
gccaccgcggtcgtcgtcatcatcctcg	Protospacer
**    *********************.

7. spacer 14.1|3003612|28|NZ_CP053452|CRISPRCasFinder matches to NZ_CP004395 (Celeribacter indicus strain P73 plasmid pP73B, complete sequence) position: , mismatch: 5, identity: 0.821

gcgcgggcggtcgtcgtcatcatcctca	CRISPR spacer
gccaccgcggtcgtcgtcatcatcctcg	Protospacer
**    *********************.

8. spacer 14.1|3003612|28|NZ_CP053452|CRISPRCasFinder matches to NZ_CP012399 (Chelatococcus sp. CO-6 plasmid pCO-6, complete sequence) position: , mismatch: 5, identity: 0.821

gcgcgggcggtcgtcgtcatcatcctca	CRISPR spacer
gcccgggcggtcgtcgtgatcatcggcg	Protospacer
** ************** ******  *.

9. spacer 14.1|3003612|28|NZ_CP053452|CRISPRCasFinder matches to NZ_CP050081 (Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b5, complete sequence) position: , mismatch: 5, identity: 0.821

gcgcgggcggtcgtcgtcatcatcctca	CRISPR spacer
gccatggcggtcgtcttcttcatcctca	Protospacer
**   ********** ** *********

10. spacer 14.1|3003612|28|NZ_CP053452|CRISPRCasFinder matches to NZ_CP021033 (Rhizobium sp. NXC14 plasmid pRspNXC14c, complete sequence) position: , mismatch: 5, identity: 0.821

gcgcgggcggtcgtcgtcatcatcctca	CRISPR spacer
gccatggcggtcgtcttcttcatcctca	Protospacer
**   ********** ** *********

11. spacer 14.1|3003612|28|NZ_CP053452|CRISPRCasFinder matches to NZ_CP049731 (Rhizobium leguminosarum strain A1 plasmid pRL12, complete sequence) position: , mismatch: 5, identity: 0.821

gcgcgggcggtcgtcgtcatcatcctca	CRISPR spacer
gccatggcggtcgtcttcttcatcctca	Protospacer
**   ********** ** *********

12. spacer 14.1|3003612|28|NZ_CP053452|CRISPRCasFinder matches to NC_007766 (Rhizobium etli CFN 42 plasmid p42f, complete sequence) position: , mismatch: 5, identity: 0.821

gcgcgggcggtcgtcgtcatcatcctca	CRISPR spacer
gccatggcggtcgtcttcttcatcctca	Protospacer
**   ********** ** *********

13. spacer 14.1|3003612|28|NZ_CP053452|CRISPRCasFinder matches to NZ_CP006990 (Rhizobium sp. IE4771 plasmid pRetIE4771d, complete sequence) position: , mismatch: 5, identity: 0.821

gcgcgggcggtcgtcgtcatcatcctca	CRISPR spacer
gccatggcggtcgtcttcttcatcctca	Protospacer
**   ********** ** *********

14. spacer 14.1|3003612|28|NZ_CP053452|CRISPRCasFinder matches to NZ_CP021029 (Rhizobium sp. TAL182 plasmid pRetTAL182e, complete sequence) position: , mismatch: 5, identity: 0.821

gcgcgggcggtcgtcgtcatcatcctca	CRISPR spacer
gccatggcggtcgtcttcttcatcctca	Protospacer
**   ********** ** *********

15. spacer 14.1|3003612|28|NZ_CP053452|CRISPRCasFinder matches to NZ_CP013600 (Rhizobium sp. N741 plasmid pRspN741e, complete sequence) position: , mismatch: 5, identity: 0.821

gcgcgggcggtcgtcgtcatcatcctca	CRISPR spacer
gccatggcggtcgtcttcttcatcctca	Protospacer
**   ********** ** *********

16. spacer 14.1|3003612|28|NZ_CP053452|CRISPRCasFinder matches to NZ_CP013504 (Rhizobium esperanzae strain N561 plasmid pRspN561d, complete sequence) position: , mismatch: 5, identity: 0.821

gcgcgggcggtcgtcgtcatcatcctca	CRISPR spacer
gccatggcggtcgtcttcttcatcctca	Protospacer
**   ********** ** *********

17. spacer 14.1|3003612|28|NZ_CP053452|CRISPRCasFinder matches to NZ_AP014705 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence) position: , mismatch: 5, identity: 0.821

gcgcgg-gcggtcgtcgtcatcatcctca	CRISPR spacer
-cacgacgcggtcgtcgtcatcaacctct	Protospacer
 *.**. **************** ****

18. spacer 14.1|3003612|28|NZ_CP053452|CRISPRCasFinder matches to NZ_CP013510 (Rhizobium sp. N1341 plasmid pRspN1341e, complete sequence) position: , mismatch: 5, identity: 0.821

gcgcgggcggtcgtcgtcatcatcctca	CRISPR spacer
gccatggcggtcgtcttcttcatcctca	Protospacer
**   ********** ** *********

19. spacer 14.1|3003612|28|NZ_CP053452|CRISPRCasFinder matches to NZ_CP013521 (Rhizobium sp. N113 plasmid pRspN113d, complete sequence) position: , mismatch: 5, identity: 0.821

gcgcgggcggtcgtcgtcatcatcctca	CRISPR spacer
gccatggcggtcgtcttcttcatcctca	Protospacer
**   ********** ** *********

20. spacer 14.1|3003612|28|NZ_CP053452|CRISPRCasFinder matches to NZ_CP021127 (Rhizobium sp. Kim5 plasmid pRetKim5c, complete sequence) position: , mismatch: 5, identity: 0.821

gcgcgggcggtcgtcgtcatcatcctca	CRISPR spacer
gccatggcggtcgtcttcttcatcctca	Protospacer
**   ********** ** *********

21. spacer 14.1|3003612|28|NZ_CP053452|CRISPRCasFinder matches to NZ_CP013494 (Rhizobium sp. N6212 plasmid pRspN6212d, complete sequence) position: , mismatch: 5, identity: 0.821

gcgcgggcggtcgtcgtcatcatcctca	CRISPR spacer
gccatggcggtcgtcttcttcatcctca	Protospacer
**   ********** ** *********

22. spacer 14.1|3003612|28|NZ_CP053452|CRISPRCasFinder matches to NZ_CP013515 (Rhizobium sp. N1314 plasmid pRspN1314d, complete sequence) position: , mismatch: 5, identity: 0.821

gcgcgggcggtcgtcgtcatcatcctca	CRISPR spacer
gccatggcggtcgtcttcttcatcctca	Protospacer
**   ********** ** *********

23. spacer 14.1|3003612|28|NZ_CP053452|CRISPRCasFinder matches to NZ_CP013594 (Rhizobium sp. N871 plasmid pRspN871d, complete sequence) position: , mismatch: 5, identity: 0.821

gcgcgggcggtcgtcgtcatcatcctca	CRISPR spacer
gccatggcggtcgtcttcttcatcctca	Protospacer
**   ********** ** *********

24. spacer 14.1|3003612|28|NZ_CP053452|CRISPRCasFinder matches to NC_017575 (Ralstonia solanacearum Po82 megaplasmid, complete sequence) position: , mismatch: 5, identity: 0.821

gcgcgggcggtcgtcgtcatcatcctca	CRISPR spacer
gagcgggcgggcatcgtcatcatccacc	Protospacer
* ******** *.************ *

25. spacer 14.1|3003612|28|NZ_CP053452|CRISPRCasFinder matches to NZ_CP026308 (Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.821

gcgcgggcggtcgtcgtcatcatcctca	CRISPR spacer
gagcgggcgggcatcgtcatcatccacc	Protospacer
* ******** *.************ *

26. spacer 14.1|3003612|28|NZ_CP053452|CRISPRCasFinder matches to CP007644 (Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803c, complete sequence) position: , mismatch: 5, identity: 0.821

gcgcgggcggtcgtcgtcatcatcctca	CRISPR spacer
gccatggcggtcgtcttcttcatcctca	Protospacer
**   ********** ** *********

27. spacer 14.1|3003612|28|NZ_CP053452|CRISPRCasFinder matches to NZ_CP013605 (Rhizobium sp. N731 plasmid pRspN731d, complete sequence) position: , mismatch: 5, identity: 0.821

gcgcgggcggtcgtcgtcatcatcctca	CRISPR spacer
gccatggcggtcgtcttcttcatcctca	Protospacer
**   ********** ** *********

28. spacer 14.1|3003612|28|NZ_CP053452|CRISPRCasFinder matches to NZ_CP020952 (Rhizobium sp. CIAT894 plasmid pRheCIAT894e, complete sequence) position: , mismatch: 5, identity: 0.821

gcgcgggcggtcgtcgtcatcatcctca	CRISPR spacer
gccatggcggtcgtcttcttcatcctca	Protospacer
**   ********** ** *********

29. spacer 14.1|3003612|28|NZ_CP053452|CRISPRCasFinder matches to NZ_CP012940 (Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.821

gcgcgggcggtcgtcgtcatcatcctca	CRISPR spacer
gagcgggcgggcatcgtcatcatccacc	Protospacer
* ******** *.************ *

30. spacer 14.1|3003612|28|NZ_CP053452|CRISPRCasFinder matches to NZ_CP012944 (Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.821

gcgcgggcggtcgtcgtcatcatcctca	CRISPR spacer
gagcgggcgggcatcgtcatcatccacc	Protospacer
* ******** *.************ *

31. spacer 14.1|3003612|28|NZ_CP053452|CRISPRCasFinder matches to NZ_CP012944 (Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.821

gcgcgggcggtcgtcgtcatcatcctca	CRISPR spacer
gagcgggcgggcatcgtcatcatccacc	Protospacer
* ******** *.************ *

32. spacer 14.1|3003612|28|NZ_CP053452|CRISPRCasFinder matches to NZ_CP051295 (Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence) position: , mismatch: 5, identity: 0.821

gcgcgggcggtcgtcgtcatcatcctca	CRISPR spacer
gagcgggcgggcatcgtcatcatccacc	Protospacer
* ******** *.************ *

33. spacer 14.1|3003612|28|NZ_CP053452|CRISPRCasFinder matches to NZ_CP022565 (Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK01, complete sequence) position: , mismatch: 5, identity: 0.821

gcgcgggcggtcgtcgtcatcatcctca	CRISPR spacer
gccatggcggtcgtcttcttcatcctca	Protospacer
**   ********** ** *********

34. spacer 3.1|1427581|31|NZ_CP053452|CRISPRCasFinder matches to NC_010311 (Streptomyces sp. HK1 plasmid pSHK1, complete sequence) position: , mismatch: 6, identity: 0.806

gggaggcgaggacggcggaaggggacgcccg	CRISPR spacer
ggacggcgaggacggcggagggggacacggg	Protospacer
**. ***************.******.*  *

35. spacer 14.1|3003612|28|NZ_CP053452|CRISPRCasFinder matches to NC_013858 (Azospirillum sp. B510 plasmid pAB510d, complete sequence) position: , mismatch: 6, identity: 0.786

gcgcgggcggtcgtcgtcatcatcctca	CRISPR spacer
ctgccggcgatcgtcgtcatcatcctgg	Protospacer
 .** ****.**************** .

36. spacer 14.1|3003612|28|NZ_CP053452|CRISPRCasFinder matches to NZ_CP018096 (Chelatococcus daeguensis strain TAD1 plasmid pTAD1, complete sequence) position: , mismatch: 6, identity: 0.786

gcgcgggcggtcgtcgtcatcatcctca	CRISPR spacer
gcccgggcggtcgtcgtgatcatcgggg	Protospacer
** ************** ******   .

37. spacer 30.1|7237512|32|NZ_CP053452|CRISPRCasFinder matches to MN329674 (Mycobacterium phage JoieB, complete genome) position: , mismatch: 6, identity: 0.812

gcggcgcgtccgcgttgttgaa---cttcggcgca	CRISPR spacer
gcggcccgtccgcgttgatgaacgccttcagc---	Protospacer
***** *********** ****   ****.**

38. spacer 30.1|7237512|32|NZ_CP053452|CRISPRCasFinder matches to MH727562 (Mycobacterium phage VasuNzinga, complete genome) position: , mismatch: 6, identity: 0.812

gcggcgcgtccgcgttgttgaa---cttcggcgca	CRISPR spacer
gcggcccgtccgcgttgatgaacgccttcagc---	Protospacer
***** *********** ****   ****.**

39. spacer 30.1|7237512|32|NZ_CP053452|CRISPRCasFinder matches to JF704100 (Mycobacterium phage Marvin, complete sequence) position: , mismatch: 6, identity: 0.812

gcggcgcgtccgcgttgttgaa---cttcggcgca	CRISPR spacer
gcggcccgtccgcgttgatgaacgccttcagc---	Protospacer
***** *********** ****   ****.**

40. spacer 30.1|7237512|32|NZ_CP053452|CRISPRCasFinder matches to MN428056 (Mycobacterium phage Pringar, complete genome) position: , mismatch: 6, identity: 0.812

gcggcgcgtccgcgttgttgaa---cttcggcgca	CRISPR spacer
gcggcccgtccgcgttgatgaacgccttcagc---	Protospacer
***** *********** ****   ****.**

41. spacer 3.1|1427581|31|NZ_CP053452|CRISPRCasFinder matches to NZ_CP021084 (Deinococcus ficus strain CC-FR2-10 plasmid pDFI3, complete sequence) position: , mismatch: 7, identity: 0.774

gggaggcgaggacggcggaaggggacgcccg	CRISPR spacer
gggaggcgaggacggcggcatggcctgctgg	Protospacer
****************** * **  .**. *

42. spacer 9.17|1905096|35|NZ_CP053452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012399 (Chelatococcus sp. CO-6 plasmid pCO-6, complete sequence) position: , mismatch: 7, identity: 0.8

ttgatgtccgcgaggagcttcttgcccgtctcggc	CRISPR spacer
ttgtcgttgacgaggagcttcttggccttctcggc	Protospacer
*** .**. .************** ** *******

43. spacer 9.17|1905096|35|NZ_CP053452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP037915 (Sphingomonas sp. AAP5 plasmid p150, complete sequence) position: , mismatch: 7, identity: 0.8

---ttgatgtccgcgaggagcttcttgcccgtctcggc	CRISPR spacer
agattgata---gcgaggagctttttgcccttctcgga	Protospacer
   *****.   ***********.****** ******

44. spacer 9.17|1905096|35|NZ_CP053452|PILER-CR,CRISPRCasFinder,CRT matches to MF959999 (Marinobacter phage PS3, complete genome) position: , mismatch: 7, identity: 0.8

ttgatgtccgcgaggagcttcttgccc--gtctcggc	CRISPR spacer
tcgatgtcctcgaggagctttttgcccagatcccg--	Protospacer
*.******* **********.******  .**.**

45. spacer 10.25|1912189|35|NZ_CP053452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040821 (Paraoceanicella profunda strain D4M1 plasmid pD4M1C, complete sequence) position: , mismatch: 7, identity: 0.8

gtgagcgcggcgacgatggcggccgggtt--caggac	CRISPR spacer
ttgagcgcggcgaccatggccgccgggctgcccgg--	Protospacer
 ************* ***** ******.*  * **

46. spacer 10.25|1912189|35|NZ_CP053452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR134463 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 21, complete sequence) position: , mismatch: 7, identity: 0.8

gtgagcgcggcgacgatggcggccg-ggttcaggac	CRISPR spacer
gtgagcgaggcgaccatggcggccgccgtgcccga-	Protospacer
******* ****** **********  ** *  **

47. spacer 14.1|3003612|28|NZ_CP053452|CRISPRCasFinder matches to NZ_CP032685 (Rhizobium sp. CCGE531 plasmid pRCCGE531d, complete sequence) position: , mismatch: 7, identity: 0.75

gcgcgggcggtcgtcgtcatcatcctca	CRISPR spacer
ttgcgggcggtcgtcgtcttcatgccgg	Protospacer
 .**************** **** *. .

48. spacer 14.1|3003612|28|NZ_CP053452|CRISPRCasFinder matches to NZ_CP032690 (Rhizobium sp. CCGE532 plasmid pRCCGE532d, complete sequence) position: , mismatch: 7, identity: 0.75

gcgcgggcggtcgtcgtcatcatcctca	CRISPR spacer
ttgcgggcggtcgtcgtcttcatgccgg	Protospacer
 .**************** **** *. .

49. spacer 14.1|3003612|28|NZ_CP053452|CRISPRCasFinder matches to NZ_AP014686 (Bradyrhizobium diazoefficiens strain NK6 plasmid pNK6b, complete sequence) position: , mismatch: 7, identity: 0.75

gcgcgggcggtcgtcgtcatcatcctca	CRISPR spacer
ggcatcgcggtcgtcgtcttcatcctcg	Protospacer
*     ************ ********.

50. spacer 22.1|4489133|29|NZ_CP053452|CRISPRCasFinder matches to MN694717 (Marine virus AFVG_250M1062, complete genome) position: , mismatch: 7, identity: 0.759

tgtgaagacgcgggagtcacagacgcccg	CRISPR spacer
aacgaagactcgggagtcacagactcctc	Protospacer
 ..****** ************** **.

51. spacer 22.1|4489133|29|NZ_CP053452|CRISPRCasFinder matches to MN693788 (Marine virus AFVG_250M1061, complete genome) position: , mismatch: 7, identity: 0.759

tgtgaagacgcgggagtcacagacgcccg	CRISPR spacer
aacgaagactcgggagtcacagactcctc	Protospacer
 ..****** ************** **.

52. spacer 22.1|4489133|29|NZ_CP053452|CRISPRCasFinder matches to MN694336 (Marine virus AFVG_250M1063, complete genome) position: , mismatch: 7, identity: 0.759

tgtgaagacgcgggagtcacagacgcccg	CRISPR spacer
aacgaagactcgggagtcacagactcctc	Protospacer
 ..****** ************** **.

53. spacer 9.5|1904226|34|NZ_CP053452|PILER-CR,CRISPRCasFinder,CRT matches to NC_020543 (Sphingomonas sp. MM-1 plasmid pISP2, complete sequence) position: , mismatch: 8, identity: 0.765

ttgatgaggagctgcttctcggcggcctcgtcgg	CRISPR spacer
agattgaggagctgcttctcggcggcatcgagcg	Protospacer
  . ********************** ***   *

54. spacer 9.5|1904226|34|NZ_CP053452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP017657 (Sphingobium cloacae strain JCM 10874 plasmid pSCLO_3, complete sequence) position: , mismatch: 8, identity: 0.765

ttgatgaggagctgcttctcggcggcctcgtcgg	CRISPR spacer
aggttgaggagctgcttctcggcggcgtccagcg	Protospacer
  * ********************** **    *

55. spacer 9.5|1904226|34|NZ_CP053452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP005191 (Sphingobium sp. MI1205 plasmid pMI2, complete sequence) position: , mismatch: 8, identity: 0.765

ttgatgaggagctgcttctcggcggcctcgtcgg	CRISPR spacer
aggttgaggagctgcttctcggcggcgtccagcg	Protospacer
  * ********************** **    *

56. spacer 9.5|1904226|34|NZ_CP053452|PILER-CR,CRISPRCasFinder,CRT matches to AP021850 (Deinococcus grandis ATCC 43672 plasmid: pDEGR-1 DNA, complete genome) position: , mismatch: 8, identity: 0.765

ttgatgaggagctgcttctcggcggcctcgtcgg	CRISPR spacer
tcggcgagcagctgcttcgcggcggcctcgcggc	Protospacer
*.*..*** ********* ***********. *

57. spacer 9.17|1905096|35|NZ_CP053452|PILER-CR,CRISPRCasFinder,CRT matches to NC_010510 (Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete sequence) position: , mismatch: 8, identity: 0.771

ttgatgtccgcgaggagcttcttgcccgtctcggc	CRISPR spacer
tggtcgttgacgaggagcttcttggccttctcggc	Protospacer
* * .**. .************** ** *******

58. spacer 9.39|1906702|35|NZ_CP053452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 8, identity: 0.771

agcgcgtcgaacacggccttgagcttgaacatcag	CRISPR spacer
tgcgcgtcgaacacggccttgcgctcgatggtcga	Protospacer
 ******************** ***.**  .**..

59. spacer 10.12|1911246|34|NZ_CP053452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013369 (Burkholderia ubonensis strain RF23-BP41 plasmid pRF23, complete sequence) position: , mismatch: 8, identity: 0.765

gcgagaacgccggcgtcaaggaccggatgggcaa	CRISPR spacer
gcgagaacgccggcatcaaggatcgacccgtcga	Protospacer
**************.*******.**. . * *.*

60. spacer 10.25|1912189|35|NZ_CP053452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015746 (Shinella sp. HZN7 plasmid pShin-10, complete sequence) position: , mismatch: 8, identity: 0.771

gtgagcgcggcgacgatggcggccgggttcaggac	CRISPR spacer
gcgggcgcggcgacgatcgcggcggggttcggatt	Protospacer
*.*.************* ***** ******.*. .

61. spacer 10.25|1912189|35|NZ_CP053452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029831 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed7, complete sequence) position: , mismatch: 8, identity: 0.771

gtgagc---gcggcgacgatggcggccgggttcaggac	CRISPR spacer
---agcccggcggcggcgatgtcggccgggttcatcag	Protospacer
   ***   ******.***** ************  *

62. spacer 20.2|3913965|33|NZ_CP053452|CRISPRCasFinder matches to MK686072 (Streptomyces phage RosaAsantewaa, complete genome) position: , mismatch: 8, identity: 0.758

cgctcggtgacgcacttgttctcggtgacggtc	CRISPR spacer
cgagcggtgacgatcttgttctcggtgagaacc	Protospacer
**  ********  ************** ...*

63. spacer 22.1|4489133|29|NZ_CP053452|CRISPRCasFinder matches to NC_008712 (Paenarthrobacter aurescens TC1 plasmid pTC1, complete sequence) position: , mismatch: 8, identity: 0.724

tgtgaagacgcgggagtcacagacgcccg	CRISPR spacer
cctgaagacgtgggagtcacagaaaaagg	Protospacer
. ********.************ .   *

64. spacer 30.1|7237512|32|NZ_CP053452|CRISPRCasFinder matches to MK937601 (Gordonia phage Charming, complete genome) position: , mismatch: 8, identity: 0.75

gcggcgcgtccgcgttgttgaacttcggcgca	CRISPR spacer
cggcctcgtccgcggtgttgaacttcgacgag	Protospacer
  * * ******** ************.** .

65. spacer 30.1|7237512|32|NZ_CP053452|CRISPRCasFinder matches to MH976519 (Gordonia phage Tangent, complete genome) position: , mismatch: 8, identity: 0.75

gcggcgcgtccgcgttgttgaacttcggcgca	CRISPR spacer
cggcctcgtccgcggtgttgaacttcgacgtg	Protospacer
  * * ******** ************.**..

66. spacer 30.1|7237512|32|NZ_CP053452|CRISPRCasFinder matches to MH976510 (Gordonia phage Fosterous, complete genome) position: , mismatch: 8, identity: 0.75

gcggcgcgtccgcgttgttgaacttcggcgca	CRISPR spacer
cggcctcgtccgcggtgttgaacttcgacgtg	Protospacer
  * * ******** ************.**..

67. spacer 30.1|7237512|32|NZ_CP053452|CRISPRCasFinder matches to MH976518 (Gordonia phage Stultus, complete genome) position: , mismatch: 8, identity: 0.75

gcggcgcgtccgcgttgttgaacttcggcgca	CRISPR spacer
cggcctcgtccgcggtgttgaacttcgacgtg	Protospacer
  * * ******** ************.**..

68. spacer 30.1|7237512|32|NZ_CP053452|CRISPRCasFinder matches to MH479924 (Gordonia phage Rofo, complete genome) position: , mismatch: 8, identity: 0.75

gcggcgcgtccgcgttgttgaacttcggcgca	CRISPR spacer
cggcctcgtccgcggtgttgaacttcgacgtg	Protospacer
  * * ******** ************.**..

69. spacer 30.1|7237512|32|NZ_CP053452|CRISPRCasFinder matches to MK937594 (Gordonia phage Galadriel, complete genome) position: , mismatch: 8, identity: 0.75

gcggcgcgtccgcgttgttgaacttcggcgca	CRISPR spacer
cggcctcgtccgcggtgttgaacttcgacgtg	Protospacer
  * * ******** ************.**..

70. spacer 30.1|7237512|32|NZ_CP053452|CRISPRCasFinder matches to MN329673 (Gordonia phage Jabberwocky, complete genome) position: , mismatch: 8, identity: 0.75

gcggcgcgtccgcgttgttgaacttcggcgca	CRISPR spacer
cggcctcgtccgcggtgttgaacttcgacgtg	Protospacer
  * * ******** ************.**..

71. spacer 30.1|7237512|32|NZ_CP053452|CRISPRCasFinder matches to MT723934 (Gordonia phage Love, complete genome) position: , mismatch: 8, identity: 0.75

gcggcgcgtccgcgttgttgaacttcggcgca	CRISPR spacer
cggcctcgtccgcggtgttgaacttcgacgtg	Protospacer
  * * ******** ************.**..

72. spacer 30.1|7237512|32|NZ_CP053452|CRISPRCasFinder matches to MH651166 (Gordonia phage Angelicage, complete genome) position: , mismatch: 8, identity: 0.75

gcggcgcgtccgcgttgttgaacttcggcgca	CRISPR spacer
cggcctcgtccgcggtgttgaacttcgacgtg	Protospacer
  * * ******** ************.**..

73. spacer 30.1|7237512|32|NZ_CP053452|CRISPRCasFinder matches to MT639640 (Gordonia phage Paries, complete genome) position: , mismatch: 8, identity: 0.75

gcggcgcgtccgcgttgttgaacttcggcgca	CRISPR spacer
cggcctcgtccgcggtgttgaacttcgacgtg	Protospacer
  * * ******** ************.**..

74. spacer 30.1|7237512|32|NZ_CP053452|CRISPRCasFinder matches to MK977702 (Gordonia terrae phage McKinley, complete genome) position: , mismatch: 8, identity: 0.75

gcggcgcgtccgcgttgttgaacttcggcgca	CRISPR spacer
cggcctcgtccgcggtgttgaacttcgacgtg	Protospacer
  * * ******** ************.**..

75. spacer 30.1|7237512|32|NZ_CP053452|CRISPRCasFinder matches to NC_042108 (Gordonia phage Brandonk123, complete genome) position: , mismatch: 8, identity: 0.75

gcggcgcgtccgcgttgttgaacttcggcgca	CRISPR spacer
cggcctcgtccgcggtgttgaacttcgacgtg	Protospacer
  * * ******** ************.**..

76. spacer 30.1|7237512|32|NZ_CP053452|CRISPRCasFinder matches to MH976514 (Gordonia phage Nordenberg, complete genome) position: , mismatch: 8, identity: 0.75

gcggcgcgtccgcgttgttgaacttcggcgca	CRISPR spacer
cggcctcgtccgcggtgttgaacttcgacgtg	Protospacer
  * * ******** ************.**..

77. spacer 30.1|7237512|32|NZ_CP053452|CRISPRCasFinder matches to MH976508 (Gordonia phage Bibwit, complete genome) position: , mismatch: 8, identity: 0.75

gcggcgcgtccgcgttgttgaacttcggcgca	CRISPR spacer
cggcctcgtccgcggtgttgaacttcgacgtg	Protospacer
  * * ******** ************.**..

78. spacer 30.1|7237512|32|NZ_CP053452|CRISPRCasFinder matches to MH976506 (Gordonia phage Affeca, complete genome) position: , mismatch: 8, identity: 0.75

gcggcgcgtccgcgttgttgaacttcggcgca	CRISPR spacer
cggcctcgtccgcggtgttgaacttcgacgtg	Protospacer
  * * ******** ************.**..

79. spacer 30.1|7237512|32|NZ_CP053452|CRISPRCasFinder matches to MN329677 (Gordonia phage Keitabear, complete genome) position: , mismatch: 8, identity: 0.75

gcggcgcgtccgcgttgttgaacttcggcgca	CRISPR spacer
cggcctcgtccgcggtgttgaacttcgacgtg	Protospacer
  * * ******** ************.**..

80. spacer 30.1|7237512|32|NZ_CP053452|CRISPRCasFinder matches to MH976507 (Gordonia phage Ailee, complete genome) position: , mismatch: 8, identity: 0.75

gcggcgcgtccgcgttgttgaacttcggcgca	CRISPR spacer
cggcctcgtccgcggtgttgaacttcgacgtg	Protospacer
  * * ******** ************.**..

81. spacer 30.1|7237512|32|NZ_CP053452|CRISPRCasFinder matches to MT498035 (Gordonia Phage Barsten, complete genome) position: , mismatch: 8, identity: 0.75

gcggcgcgtccgcgttgttgaacttcggcgca	CRISPR spacer
cggcctcgtccgcggtgttgaacttcgacgtg	Protospacer
  * * ******** ************.**..

82. spacer 30.1|7237512|32|NZ_CP053452|CRISPRCasFinder matches to MH976512 (Gordonia phage Geodirt, complete genome) position: , mismatch: 8, identity: 0.75

gcggcgcgtccgcgttgttgaacttcggcgca	CRISPR spacer
cggcctcgtccgcggtgttgaacttcgacgtg	Protospacer
  * * ******** ************.**..

83. spacer 30.1|7237512|32|NZ_CP053452|CRISPRCasFinder matches to NC_031239 (Gordonia phage Vivi2, complete genome) position: , mismatch: 8, identity: 0.75

gcggcgcgtccgcgttgttgaacttcggcgca	CRISPR spacer
cggcctcgtccgcggtgttgaacttcgacgag	Protospacer
  * * ******** ************.** .

84. spacer 9.5|1904226|34|NZ_CP053452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023738 (Methylosinus trichosporium OB3b plasmid pOB3b1, complete sequence) position: , mismatch: 9, identity: 0.735

ttgatgaggagctgcttctcggcggcctcgtcgg	CRISPR spacer
tcgcgccgctgctgcttctcggcggcgtcgccgg	Protospacer
*.*    *  **************** ***.***

85. spacer 9.5|1904226|34|NZ_CP053452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014599 (Yangia sp. CCB-MM3 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.735

ttgatgaggagctgcttctcggcggcctcgtcgg	CRISPR spacer
ccgagcggttgctgcgtctcgtcggcctcgtcgg	Protospacer
..**  .*  ***** ***** ************

86. spacer 9.5|1904226|34|NZ_CP053452|PILER-CR,CRISPRCasFinder,CRT matches to NC_009669 (Ochrobactrum anthropi ATCC 49188 plasmid pOANT01, complete sequence) position: , mismatch: 9, identity: 0.735

ttgatgaggagctgcttctcggcggcctcgtcgg	CRISPR spacer
tcgatgagcacctgcttctcggcggcgccatgca	Protospacer
*.****** * *************** .*.*  .

87. spacer 9.55|1907866|35|NZ_CP053452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009453 (Sphingopyxis sp. 113P3 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.743

tgcaccagctgcccggccttgaccaccggcgcgta	CRISPR spacer
ttgatctgctgcccgtccttgaacaccggcgccag	Protospacer
*  *.* ******** ****** *********  .

88. spacer 10.14|1911389|34|NZ_CP053452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045549 (Streptomyces sp. SYP-A7193 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.735

agattccggccgctgtgggcgatcgcctcgttga	CRISPR spacer
agcagccggccgccgggggcgatcgcctcgcgcg	Protospacer
**   ********.* **************.  .

89. spacer 30.1|7237512|32|NZ_CP053452|CRISPRCasFinder matches to NC_011879 (Pseudarthrobacter chlorophenolicus A6 plasmid pACHL01, complete sequence) position: , mismatch: 9, identity: 0.719

gcggcgcgtccgcgttgttgaacttcggcgca	CRISPR spacer
gcggcgcgtccgggttgtcgaactcgatgggg	Protospacer
************ *****.*****. .  * .

90. spacer 30.1|7237512|32|NZ_CP053452|CRISPRCasFinder matches to NZ_CP048398 (Streptomyces sp. S4.7 plasmid pSSPS4.7a, complete sequence) position: , mismatch: 9, identity: 0.719

gcggcgcgtccgcgttgttgaacttcggcgca	CRISPR spacer
ggacgtcgtcggcgttgttgaactccggctcg	Protospacer
* .   **** *************.**** *.

91. spacer 9.5|1904226|34|NZ_CP053452|PILER-CR,CRISPRCasFinder,CRT matches to MN234216 (Streptomyces phage Gilgamesh, complete genome) position: , mismatch: 10, identity: 0.706

ttgatgaggagctgcttctcggcggcctcgtcgg	CRISPR spacer
gccttgtggacctgcttctcggcggccttcttga	Protospacer
 .  ** *** *****************. *.*.

92. spacer 9.39|1906702|35|NZ_CP053452|PILER-CR,CRISPRCasFinder,CRT matches to MK875791 (Gordonia phage Yakult, complete genome) position: , mismatch: 10, identity: 0.714

agcgcgtcgaacacggccttgagcttgaacatcag	CRISPR spacer
agcgcgtcgaactcggcctggagctcgggggcagg	Protospacer
************ ****** *****.*.. .. .*

93. spacer 10.5|1910738|35|NZ_CP053452|PILER-CR,CRISPRCasFinder,CRT matches to CP002964 (Emticicia oligotrophica DSM 17448 plasmid pEMTOL03, complete sequence) position: , mismatch: 10, identity: 0.714

ataggaaagctatggtagtagaagaagaggttaag	CRISPR spacer
ggcctaattctattgtattagaagaagaggttaaa	Protospacer
.    **  **** *** ****************.

94. spacer 10.11|1911174|36|NZ_CP053452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026091 (Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.722

agaccgtcgtgagccgggtggagcggctgctcccga	CRISPR spacer
tggtgccggtgagccgggtggagcggctgcacacgg	Protospacer
 *..  . ********************** * **.

95. spacer 10.11|1911174|36|NZ_CP053452|PILER-CR,CRISPRCasFinder,CRT matches to NC_014309 (Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome) position: , mismatch: 10, identity: 0.722

agaccgtcgtgagccgggtggagcggctgctcccga	CRISPR spacer
tggtgccggtgagccgggtggagcggctgcacacgg	Protospacer
 *..  . ********************** * **.

96. spacer 10.11|1911174|36|NZ_CP053452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021653 (Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.722

agaccgtcgtgagccgggtggagcggctgctcccga	CRISPR spacer
tggtgccggtgagccgggtggagcggctgcacacgg	Protospacer
 *..  . ********************** * **.

97. spacer 10.11|1911174|36|NZ_CP053452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026093 (Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.722

agaccgtcgtgagccgggtggagcggctgctcccga	CRISPR spacer
tggtgccggtgagccgggtggagcggctgcacacgg	Protospacer
 *..  . ********************** * **.

98. spacer 10.11|1911174|36|NZ_CP053452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021767 (Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.722

agaccgtcgtgagccgggtggagcggctgctcccga	CRISPR spacer
tggtgccggtgagccgggtggagcggctgcacacgg	Protospacer
 *..  . ********************** * **.

99. spacer 10.11|1911174|36|NZ_CP053452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012688 (Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.722

agaccgtcgtgagccgggtggagcggctgctcccga	CRISPR spacer
tggtgccggtgagccgggtggagcggctgcacacgg	Protospacer
 *..  . ********************** * **.

100. spacer 10.11|1911174|36|NZ_CP053452|PILER-CR,CRISPRCasFinder,CRT matches to NC_017575 (Ralstonia solanacearum Po82 megaplasmid, complete sequence) position: , mismatch: 10, identity: 0.722

agaccgtcgtgagccgggtggagcggctgctcccga	CRISPR spacer
tggtgccggtgagccgggtggagcggctgcacacgg	Protospacer
 *..  . ********************** * **.

101. spacer 10.11|1911174|36|NZ_CP053452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021765 (Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.722

agaccgtcgtgagccgggtggagcggctgctcccga	CRISPR spacer
tggtaccggtgagccgggtggagcggctgcacacgg	Protospacer
 *..  . ********************** * **.

102. spacer 10.11|1911174|36|NZ_CP053452|PILER-CR,CRISPRCasFinder,CRT matches to CP047139 (Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.722

agaccgtcgtgagccgggtggagcggctgctcccga	CRISPR spacer
tggtgccggtgagccgggtggagcggctgcacacgg	Protospacer
 *..  . ********************** * **.

103. spacer 10.11|1911174|36|NZ_CP053452|PILER-CR,CRISPRCasFinder,CRT matches to CP047137 (Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.722

agaccgtcgtgagccgggtggagcggctgctcccga	CRISPR spacer
tggtgccggtgagccgggtggagcggctgcacacgg	Protospacer
 *..  . ********************** * **.

104. spacer 10.11|1911174|36|NZ_CP053452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012940 (Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.722

agaccgtcgtgagccgggtggagcggctgctcccga	CRISPR spacer
tggtgccggtgagccgggtggagcggctgcacacgg	Protospacer
 *..  . ********************** * **.

105. spacer 10.11|1911174|36|NZ_CP053452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012944 (Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.722

agaccgtcgtgagccgggtggagcggctgctcccga	CRISPR spacer
tggtgccggtgagccgggtggagcggctgcacacgg	Protospacer
 *..  . ********************** * **.

106. spacer 10.11|1911174|36|NZ_CP053452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP051295 (Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence) position: , mismatch: 10, identity: 0.722

agaccgtcgtgagccgggtggagcggctgctcccga	CRISPR spacer
tggtgccggtgagccgggtggagcggctgcacacgg	Protospacer
 *..  . ********************** * **.

107. spacer 10.14|1911389|34|NZ_CP053452|PILER-CR,CRISPRCasFinder,CRT matches to NC_019894 (Singulisphaera acidiphila DSM 18658 plasmid pSINAC02, complete sequence) position: , mismatch: 10, identity: 0.706

agattccggccgctgtgggcgatcgcctcgttga	CRISPR spacer
aatccgccttcgctgtgggcgttcgcctcgctga	Protospacer
*. .. *  .*********** ********.***

108. spacer 10.25|1912189|35|NZ_CP053452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022369 (Azospirillum sp. TSH58 plasmid TSH58_p05, complete sequence) position: , mismatch: 10, identity: 0.714

gtgagcgcggcgacgatggcggccgggttcaggac	CRISPR spacer
ttcagcgccgcgccgatggcggccgggtcggtgct	Protospacer
 * ***** *** ***************. . * .

109. spacer 10.25|1912189|35|NZ_CP053452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011667 (Streptomyces sp. Mg1 plasmid pSMg1-3, complete sequence) position: , mismatch: 10, identity: 0.714

gtgagcgcggcgacgatggcggccgggttcaggac	CRISPR spacer
cccagcgcggcgaggagggcggccgggtcgggccc	Protospacer
 . ********** ** ***********. .*  *

110. spacer 10.25|1912189|35|NZ_CP053452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033583 (Streptomyces sp. ADI95-16 plasmid pADI95-16b, complete sequence) position: , mismatch: 10, identity: 0.714

gtgagcgcggcgacgatggcggccgggttcaggac	CRISPR spacer
cccagcgcggcgaggagggcggccgggtcgggccc	Protospacer
 . ********** ** ***********. .*  *

111. spacer 30.1|7237512|32|NZ_CP053452|CRISPRCasFinder matches to NZ_CP032520 (Cupriavidus oxalaticus strain T2 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

gcggcgcgtccgcgttgttgaacttcggcgca	CRISPR spacer
gtatcgcgtccgcgttggtgaaattcgcgagt	Protospacer
*.. ************* **** ****  .

112. spacer 40.2|9827993|40|NZ_CP053452|CRISPRCasFinder matches to NZ_CP026518 (Deinococcus sp. NW-56 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.75

ggggccgggcagaaggtggccgagaccctgtcctcgggca	CRISPR spacer
gccgccgggcagaaggtggccgaggcccagtaccagctcg	Protospacer
*  *********************.*** ** *. *  *.

113. spacer 10.30|1912547|36|NZ_CP053452|PILER-CR,CRISPRCasFinder,CRT matches to AB451219 (Ralstonia phage RSB1 DNA, complete genome) position: , mismatch: 11, identity: 0.694

ctgccgatcccgaaggccgacgagtcggagatcgag	CRISPR spacer
tggggcgatacgatggccgaggagtcggagatcgag	Protospacer
. *   . . *** ****** ***************

114. spacer 10.30|1912547|36|NZ_CP053452|PILER-CR,CRISPRCasFinder,CRT matches to NC_011201 (Ralstonia phage RSB1, complete genome) position: , mismatch: 11, identity: 0.694

ctgccgatcccgaaggccgacgagtcggagatcgag	CRISPR spacer
tggggcgatacgatggccgaggagtcggagatcgag	Protospacer
. *   . . *** ****** ***************

115. spacer 21.1|4485216|34|NZ_CP053452|CRISPRCasFinder matches to NZ_CP024314 (Rhizobium sp. NXC24 plasmid pRspNXC24c, complete sequence) position: , mismatch: 11, identity: 0.676

acacgacctttccgaaggtcgatccgaaggggcc	CRISPR spacer
ccaagacctttccgaaggtcgttccaggcgcaat	Protospacer
 ** ***************** ***... * . .

116. spacer 26.4|6434877|38|NZ_CP053452|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP045385 (Ruegeria sp. THAF33 plasmid pTHAF33_a, complete sequence) position: , mismatch: 11, identity: 0.711

gcgctcgccatcgcaccggtgaagatcggcatcgacgc	CRISPR spacer
gcaacagccagcgcaccggtgaagatcgacatctgaaa	Protospacer
**. . **** *****************.**** . .

117. spacer 26.4|6434877|38|NZ_CP053452|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP031947 (Ruegeria sp. AD91A plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.711

gcgctcgccatcgcaccggtgaagatcggcatcgacgc	CRISPR spacer
gcaacggccagcgcaccggtgaagatcgacatctgaaa	Protospacer
**. . **** *****************.**** . .

118. spacer 9.42|1906916|38|NZ_CP053452|PILER-CR,CRISPRCasFinder,CRT matches to NC_008270 (Rhodococcus jostii RHA1 plasmid pRHL2, complete sequence) position: , mismatch: 12, identity: 0.684

-----atgttctcgagttcggcgtcgcggtcgagctcctcccg	CRISPR spacer
ggcaggcg-----gagttcggcgtcgcggacgagctgctcaac	Protospacer
     ..*     **************** ****** ***

119. spacer 10.13|1911316|37|NZ_CP053452|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013265 (Sphingobium baderi strain DE-13 plasmid pDE1, complete sequence) position: , mismatch: 13, identity: 0.649

ccttgggccgcggccgcgatcgccgcagcgccatgtc	CRISPR spacer
gacagggcctcggccgcgatcgcggcagcgaggctct	Protospacer
  . ***** ************* ******  .. ..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

532615 : 590190

Bacillus_phage(25.0%)

transposase,protease,tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_171469279.1\|532615_534034_-\|transposase	IS66 family transposase	NA	NA	NA	NA
WP_171469280.1\|534300_535371_-	PDZ domain-containing protein	NA	NA	NA	NA
WP_171469281.1\|535509_536583_-	trypsin-like peptidase domain-containing protein	NA	NA	NA	NA
WP_171469282.1\|537222_537783_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_171469283.1\|537769_539860_+	protein kinase	NA	NA	NA	NA
WP_171475926.1\|540054_541188_+	DUF1559 domain-containing protein	NA	NA	NA	NA
WP_171469284.1\|541220_541583_+	carboxypeptidase regulatory-like domain-containing protein	NA	NA	NA	NA
WP_171469285.1\|541715_542873_-	citrate synthase	NA	NA	NA	NA
WP_171469286.1\|542996_543824_-	ABC transporter permease	NA	NA	NA	NA
WP_171469287.1\|544019_544319_+	hypothetical protein	NA	NA	NA	NA
WP_171469288.1\|544579_545281_+	hypothetical protein	NA	NA	NA	NA
WP_171469289.1\|545309_546083_-	nickel pincer cofactor biosynthesis protein LarB	A0A288TYA6	Enterococcus_phage	3.3e-17	38.5
WP_171469290.1\|547039_548152_+	hypothetical protein	NA	NA	NA	NA
WP_171469291.1\|548313_549204_+	GGDEF domain-containing protein	A0A127AWB9	Bacillus_phage	1.5e-21	35.9
WP_171469292.1\|549291_550737_-	cardiolipin synthase	NA	NA	NA	NA
WP_171469293.1\|550905_551901_+	zinc-dependent alcohol dehydrogenase family protein	NA	NA	NA	NA
WP_171469294.1\|551997_552708_-	response regulator transcription factor	W8CYM9	Bacillus_phage	7.6e-37	39.7
WP_171469295.1\|553506_554298_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_171469296.1\|554622_556491_+\|tRNA	threonine--tRNA ligase	A0A2K9L6B6	Tupanvirus	1.1e-103	36.7
WP_171475916.1\|556698_557418_-	hypothetical protein	NA	NA	NA	NA
WP_171469116.1\|557431_557806_-\|transposase	IS1 family transposase	NA	NA	NA	NA
WP_171469297.1\|557964_559287_-	hypothetical protein	NA	NA	NA	NA
WP_171469298.1\|559306_560734_-	sulfatase	NA	NA	NA	NA
WP_171475927.1\|560800_561112_-	hypothetical protein	NA	NA	NA	NA
WP_171469299.1\|561585_562650_-	DUF1080 domain-containing protein	NA	NA	NA	NA
WP_171469300.1\|562785_563256_+	cell division protein FtsH	NA	NA	NA	NA
WP_171469301.1\|563404_564727_-	hypothetical protein	NA	NA	NA	NA
WP_171469302.1\|564805_566425_-	phosphoglycerate dehydrogenase	M1NSB9	Streptococcus_phage	1.9e-38	36.3
WP_171469303.1\|566589_567087_-	hypothetical protein	NA	NA	NA	NA
WP_171469304.1\|567098_567674_-	hypothetical protein	NA	NA	NA	NA
WP_171469305.1\|567773_568787_-	ribose-phosphate pyrophosphokinase	A0A1V0SKK7	Klosneuvirus	3.3e-41	32.5
WP_171469306.1\|568919_570083_+	DNA-protecting protein DprA	S6BFL3	Thermus_phage	3.3e-21	34.4
WP_171469307.1\|570118_571714_+	hypothetical protein	NA	NA	NA	NA
WP_171469308.1\|572593_573268_-	Uma2 family endonuclease	NA	NA	NA	NA
WP_171469309.1\|573331_574189_-	RICIN domain-containing protein	NA	NA	NA	NA
WP_171469310.1\|574362_576897_-\|protease	ATP-dependent Clp protease ATP-binding subunit	H6X3M6	Enterobacteria_phage	8.0e-121	32.5
WP_171468949.1\|577433_577967_-\|transposase	IS1595 family transposase	NA	NA	NA	NA
WP_171469311.1\|578183_579131_+\|transposase	IS1595 family transposase	NA	NA	NA	NA
WP_171469312.1\|579674_580478_+	lysophospholipid acyltransferase family protein	NA	NA	NA	NA
WP_171469313.1\|582973_584842_+	hypothetical protein	NA	NA	NA	NA
WP_171475928.1\|585305_589121_+	hypothetical protein	NA	NA	NA	NA
WP_171468949.1\|589656_590190_+\|transposase	IS1595 family transposase	NA	NA	NA	NA

DBSCAN-SWA_2

1469391 : 1535241

Mycobacterium_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_171469942.1\|1469391_1470789_-\|transposase	IS66 family transposase	NA	NA	NA	NA
WP_171469943.1\|1470903_1471731_+	hypothetical protein	NA	NA	NA	NA
WP_171469944.1\|1471772_1472870_+	tagatose 1,6-diphosphate aldolase	NA	NA	NA	NA
WP_171469945.1\|1472975_1474160_-	thioredoxin family protein	NA	NA	NA	NA
WP_171475966.1\|1474267_1475167_-	tyrosine recombinase XerC	A0A1I9SC88	Mycobacterium_phage	2.2e-20	37.1
WP_171469946.1\|1475209_1475428_-	hypothetical protein	NA	NA	NA	NA
WP_171469947.1\|1475708_1477367_+	MFS transporter	NA	NA	NA	NA
WP_171475967.1\|1477506_1478247_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_171469948.1\|1478288_1479668_+	UDPGP type 1 family protein	NA	NA	NA	NA
WP_171469949.1\|1479721_1480810_+	NTP transferase domain-containing protein	A0A1V0SH58	Hokovirus	6.2e-30	31.1
WP_171469950.1\|1480941_1481442_+	Holliday junction resolvase RuvX	NA	NA	NA	NA
WP_171469951.1\|1481541_1484103_+	alpha-glucan family phosphorylase	NA	NA	NA	NA
WP_171469952.1\|1484264_1484570_-	YciI family protein	NA	NA	NA	NA
WP_171469953.1\|1485063_1485822_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_171469954.1\|1487776_1490425_+	c-type cytochrome	NA	NA	NA	NA
WP_171469955.1\|1490668_1491007_-	hypothetical protein	NA	NA	NA	NA
WP_171469956.1\|1491177_1491834_-	SMC-Scp complex subunit ScpB	NA	NA	NA	NA
WP_171469957.1\|1492044_1493271_+	NADH-quinone oxidoreductase subunit NuoH	NA	NA	NA	NA
WP_171469958.1\|1493288_1493975_+	hypothetical protein	NA	NA	NA	NA
WP_171469959.1\|1493872_1494580_+	hypothetical protein	NA	NA	NA	NA
WP_171469960.1\|1494612_1496892_+	YfhO family protein	NA	NA	NA	NA
WP_171469961.1\|1496898_1498338_-	TIGR02996 domain-containing protein	NA	NA	NA	NA
WP_171469962.1\|1498389_1500042_-	urocanate hydratase	NA	NA	NA	NA
WP_171475968.1\|1500038_1500974_-	formimidoylglutamase	NA	NA	NA	NA
WP_171469963.1\|1500981_1502214_-	imidazolonepropionase	NA	NA	NA	NA
WP_171469964.1\|1502356_1503001_-	SCO family protein	NA	NA	NA	NA
WP_171469965.1\|1503022_1503994_-	protoheme IX farnesyltransferase	NA	NA	NA	NA
WP_171469966.1\|1503993_1505196_-	hypothetical protein	NA	NA	NA	NA
WP_171469967.1\|1505240_1506392_-	c-type cytochrome	NA	NA	NA	NA
WP_171469968.1\|1506410_1506755_-	cytochrome C oxidase subunit IV family protein	NA	NA	NA	NA
WP_171475969.1\|1506878_1507487_-	cytochrome c oxidase subunit 3	NA	NA	NA	NA
WP_171469969.1\|1507557_1509321_-	cbb3-type cytochrome c oxidase subunit I	NA	NA	NA	NA
WP_171475970.1\|1509324_1510416_-	cytochrome c oxidase subunit II	NA	NA	NA	NA
WP_171469970.1\|1510421_1511399_-	SCO family protein	NA	NA	NA	NA
WP_171469971.1\|1511395_1512079_-	hypothetical protein	NA	NA	NA	NA
WP_171469972.1\|1512065_1513499_-	hypothetical protein	NA	NA	NA	NA
WP_171469973.1\|1513495_1514347_-	cytochrome c	NA	NA	NA	NA
WP_171475971.1\|1514343_1514826_-	DUF3341 domain-containing protein	NA	NA	NA	NA
WP_171475972.1\|1514936_1516319_-	polysulfide reductase NrfD	NA	NA	NA	NA
WP_171475973.1\|1516374_1517262_-	4Fe-4S dicluster domain-containing protein	NA	NA	NA	NA
WP_171469974.1\|1519829_1520522_-	cytochrome c3 family protein	NA	NA	NA	NA
WP_171469975.1\|1520589_1520919_-	hypothetical protein	NA	NA	NA	NA
WP_171469976.1\|1521534_1522014_+	universal stress protein	NA	NA	NA	NA
WP_171469977.1\|1522757_1523648_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_171469978.1\|1523644_1525495_+	acetate--CoA ligase family protein	NA	NA	NA	NA
WP_171469979.1\|1526003_1526237_+	hypothetical protein	NA	NA	NA	NA
WP_171469980.1\|1526275_1526656_+	TraR/DksA C4-type zinc finger protein	NA	NA	NA	NA
WP_171469981.1\|1526744_1526945_+	hypothetical protein	NA	NA	NA	NA
WP_171469982.1\|1527374_1527545_-	hypothetical protein	NA	NA	NA	NA
WP_171469983.1\|1527657_1527999_-	hypothetical protein	NA	NA	NA	NA
WP_171475904.1\|1528087_1528330_-	hypothetical protein	NA	NA	NA	NA
WP_171468952.1\|1528907_1530284_-\|transposase	IS66 family transposase	NA	NA	NA	NA
WP_171469984.1\|1530329_1530857_-	DUF1559 domain-containing protein	NA	NA	NA	NA
WP_171469985.1\|1531016_1532078_-\|transposase	ISAs1 family transposase	NA	NA	NA	NA
WP_171469986.1\|1532566_1533019_+\|transposase	transposase	NA	NA	NA	NA
WP_171469876.1\|1533015_1533561_+\|transposase	transposase	NA	NA	NA	NA
WP_171469279.1\|1533822_1535241_-\|transposase	IS66 family transposase	NA	NA	NA	NA

DBSCAN-SWA_3

1890385 : 1948043

Stx2-converting_phage(33.33%)

transposase,protease,integrase

attL 1882339:1882398|attR 1928796:1928866

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1882339:1882398	attL	NA	NA	NA	NA
WP_171468988.1\|1890385_1891060_+\|transposase	transposase	NA	NA	NA	NA
WP_171470220.1\|1891079_1893053_+	hypothetical protein	NA	NA	NA	NA
WP_171470221.1\|1893151_1893361_+	hypothetical protein	NA	NA	NA	NA
WP_171470222.1\|1893402_1895124_+	CRISPR-associated endonuclease Cas1	NA	NA	NA	NA
WP_171470223.1\|1895123_1895408_+	CRISPR-associated endonuclease Cas2	NA	NA	NA	NA
WP_171470224.1\|1895404_1897798_+	CRISPR-associated helicase Cas3'	NA	NA	NA	NA
WP_171470225.1\|1897794_1899969_+	type I-U CRISPR-associated protein Csx17	NA	NA	NA	NA
WP_171470226.1\|1899974_1901060_+	type I-U CRISPR-associated protein Cas7	NA	NA	NA	NA
WP_171470227.1\|1901066_1902677_+	type I-U CRISPR-associated protein Cas5/Cas6	NA	NA	NA	NA
WP_171470228.1\|1902839_1903655_+	hypothetical protein	NA	NA	NA	NA
WP_171468899.1\|1908025_1909582_-\|transposase	IS66 family transposase	NA	NA	NA	NA
WP_171468900.1\|1909595_1909973_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_171468866.1\|1909966_1910314_-	hypothetical protein	NA	NA	NA	NA
WP_171468866.1\|1913240_1913588_+	hypothetical protein	NA	NA	NA	NA
WP_171468900.1\|1913581_1913959_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_171468899.1\|1913972_1915529_+\|transposase	IS66 family transposase	NA	NA	NA	NA
WP_171468898.1\|1915812_1917369_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	2.4e-59	31.7
WP_171468897.1\|1917740_1918943_+	hypothetical protein	NA	NA	NA	NA
WP_171470229.1\|1920466_1920979_+	hypothetical protein	NA	NA	NA	NA
WP_171470230.1\|1921071_1921839_+	hypothetical protein	NA	NA	NA	NA
WP_171470231.1\|1921956_1922766_+	ParB N-terminal domain-containing protein	NA	NA	NA	NA
WP_171470232.1\|1922795_1923059_+	hypothetical protein	NA	NA	NA	NA
WP_171470233.1\|1923085_1923301_+	hypothetical protein	NA	NA	NA	NA
WP_171470234.1\|1923569_1925249_+	type IV secretory system conjugative DNA transfer family protein	NA	NA	NA	NA
WP_171470235.1\|1925256_1925514_+	hypothetical protein	NA	NA	NA	NA
WP_171470236.1\|1925581_1925719_+	hypothetical protein	NA	NA	NA	NA
WP_171470237.1\|1925844_1926006_+	hypothetical protein	NA	NA	NA	NA
WP_171470238.1\|1926225_1926423_+	hypothetical protein	NA	NA	NA	NA
WP_171470239.1\|1926463_1926652_+	hypothetical protein	NA	NA	NA	NA
WP_171470240.1\|1926815_1927022_+	hypothetical protein	NA	NA	NA	NA
WP_171470241.1\|1927105_1927378_+	hypothetical protein	NA	NA	NA	NA
WP_171470242.1\|1927358_1928672_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_171470243.1\|1929073_1929421_-	hypothetical protein	NA	NA	NA	NA
1928796:1928866	attR	NA	NA	NA	NA
WP_171470244.1\|1929568_1930468_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_171470245.1\|1930464_1930944_-	RICIN domain-containing protein	NA	NA	NA	NA
WP_171470246.1\|1931176_1931923_+	GDSL family lipase	NA	NA	NA	NA
WP_171470247.1\|1931988_1932864_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0M4JBD3	Mollivirus	1.2e-42	35.4
WP_171470248.1\|1932981_1934457_+	hypothetical protein	NA	NA	NA	NA
WP_171470249.1\|1934645_1936283_-	50S ribosome-binding GTPase	NA	NA	NA	NA
WP_171470250.1\|1936415_1937621_-	DUF697 domain-containing protein	NA	NA	NA	NA
WP_171470251.1\|1937720_1938638_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_171470252.1\|1938698_1939262_-	hypothetical protein	NA	NA	NA	NA
WP_171470253.1\|1939265_1939907_-	hypothetical protein	NA	NA	NA	NA
WP_171470254.1\|1939988_1941071_+	hypothetical protein	NA	NA	NA	NA
WP_171470255.1\|1941381_1941789_-	response regulator	NA	NA	NA	NA
WP_171470256.1\|1941840_1942797_-	dihydrodipicolinate synthase family protein	NA	NA	NA	NA
WP_171470257.1\|1942917_1944177_+	PQQ-like beta-propeller repeat protein	NA	NA	NA	NA
WP_171470258.1\|1944323_1945280_+	pyridoxal-phosphate dependent enzyme	NA	NA	NA	NA
WP_171470259.1\|1945285_1945699_-	TIGR02996 domain-containing protein	NA	NA	NA	NA
WP_171470260.1\|1945695_1946022_-	hypothetical protein	K4JW53	Caulobacter_phage	8.1e-18	50.5
WP_171470261.1\|1946141_1946732_-	DUF479 domain-containing protein	NA	NA	NA	NA
WP_171470262.1\|1946984_1948043_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA

DBSCAN-SWA_4

2174921 : 2226817

Klosneuvirus(14.29%)

transposase,protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_171469116.1\|2174921_2175296_-\|transposase	IS1 family transposase	NA	NA	NA	NA
WP_171470435.1\|2175374_2175716_-	CD225/dispanin family protein	NA	NA	NA	NA
WP_171470436.1\|2175818_2176037_-	hypothetical protein	NA	NA	NA	NA
WP_171470437.1\|2176561_2179264_+\|tRNA	alanine--tRNA ligase	A0A1V0SK38	Klosneuvirus	2.2e-100	42.3
WP_171470438.1\|2179382_2181092_-	DNA repair protein RecN	NA	NA	NA	NA
WP_171470439.1\|2181866_2182058_-	DUF4177 domain-containing protein	NA	NA	NA	NA
WP_171470440.1\|2182136_2182838_-	hypothetical protein	NA	NA	NA	NA
WP_171470441.1\|2183001_2183565_-	hypothetical protein	NA	NA	NA	NA
WP_171470442.1\|2183581_2183809_-	hypothetical protein	NA	NA	NA	NA
WP_171470443.1\|2183957_2185616_-	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	1.1e-33	33.9
WP_171470444.1\|2185821_2187687_-	DNA primase	A0A0K1LMQ9	Caulobacter_phage	3.1e-45	33.3
WP_171470445.1\|2188351_2188804_+	hypothetical protein	NA	NA	NA	NA
WP_171470446.1\|2188989_2190282_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	1.9e-118	53.7
WP_171469279.1\|2190935_2192354_+\|transposase	IS66 family transposase	NA	NA	NA	NA
WP_171470447.1\|2193550_2194945_+	HEAT repeat domain-containing protein	NA	NA	NA	NA
WP_171470448.1\|2195017_2197945_+	cadherin-like domain-containing protein	NA	NA	NA	NA
WP_171470449.1\|2198017_2199235_+	glycosyltransferase	NA	NA	NA	NA
WP_171470450.1\|2199534_2202138_+	S41 family peptidase	A0A0R6PIZ1	Moraxella_phage	3.8e-25	30.4
WP_171470451.1\|2202651_2203167_+	CBS domain-containing protein	NA	NA	NA	NA
WP_171470452.1\|2203509_2204073_+	DUF1559 domain-containing protein	NA	NA	NA	NA
WP_171468952.1\|2204785_2206162_-\|transposase	IS66 family transposase	NA	NA	NA	NA
WP_171470453.1\|2206313_2206889_+	DUF1559 domain-containing protein	NA	NA	NA	NA
WP_171470454.1\|2207332_2208031_-	hypothetical protein	NA	NA	NA	NA
WP_171470455.1\|2208347_2209136_-	hypothetical protein	NA	NA	NA	NA
WP_171470456.1\|2209343_2210291_-\|transposase	IS1595 family transposase	NA	NA	NA	NA
WP_171470457.1\|2210696_2211350_+	PEP-CTERM sorting domain-containing protein	NA	NA	NA	NA
WP_171470458.1\|2211521_2213291_+	hypothetical protein	NA	NA	NA	NA
WP_171470459.1\|2213338_2214331_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_171470460.1\|2214420_2214813_-	VOC family protein	NA	NA	NA	NA
WP_171470461.1\|2215060_2215354_+	hypothetical protein	NA	NA	NA	NA
WP_171470462.1\|2215353_2215896_+	hypothetical protein	NA	NA	NA	NA
WP_171470463.1\|2216305_2216863_-	hypothetical protein	NA	NA	NA	NA
WP_171470464.1\|2217160_2217382_+	hypothetical protein	NA	NA	NA	NA
WP_171470465.1\|2217399_2217660_-	hypothetical protein	NA	NA	NA	NA
WP_171470466.1\|2218225_2219308_-	M28 family peptidase	NA	NA	NA	NA
WP_171475998.1\|2220005_2220785_+	FliA/WhiG family RNA polymerase sigma factor	A0A1I9S6C3	Bacillus_phage	4.5e-06	28.2
WP_171470467.1\|2221037_2221646_+	DUF1579 family protein	NA	NA	NA	NA
WP_171470468.1\|2221670_2222102_-	response regulator	NA	NA	NA	NA
WP_171470469.1\|2223362_2225216_+	PAS domain S-box protein	A0A2K9L0Z8	Tupanvirus	9.1e-05	30.6
WP_171468852.1\|2225227_2225431_+	response regulator	NA	NA	NA	NA
WP_171470470.1\|2225728_2226817_+\|transposase	IS630 family transposase	NA	NA	NA	NA

DBSCAN-SWA_5

2442750 : 2453345

Stx2-converting_phage(25.0%)

tail,transposase,capsid,head,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_171470630.1\|2442750_2443479_+\|transposase	ISAzo13 family transposase	NA	NA	NA	NA
WP_171470631.1\|2443500_2445075_-\|transposase	IS66 family transposase	A0A0P0ZBS5	Stx2-converting_phage	1.9e-67	36.9
WP_171470632.1\|2445099_2445462_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_171470633.1\|2445455_2445800_-	hypothetical protein	NA	NA	NA	NA
WP_171470634.1\|2445855_2446095_-	hypothetical protein	NA	NA	NA	NA
WP_171470635.1\|2446096_2446267_-	hypothetical protein	NA	NA	NA	NA
WP_171470636.1\|2446263_2446620_-\|head	phage head closure protein	A0A1P8DTK6	Proteus_phage	6.0e-06	40.5
WP_171470637.1\|2446624_2446837_-	hypothetical protein	NA	NA	NA	NA
WP_171470638.1\|2446846_2447500_-\|head,tail	phage head-tail connector protein	NA	NA	NA	NA
WP_171470639.1\|2447539_2447716_-	hypothetical protein	NA	NA	NA	NA
WP_171470640.1\|2447810_2449145_-\|capsid	phage major capsid protein	A0A0F7L2V9	uncultured_marine_virus	1.4e-55	39.3
WP_171470641.1\|2450184_2450811_+	hypothetical protein	NA	NA	NA	NA
WP_171470642.1\|2450955_2451288_+	hypothetical protein	NA	NA	NA	NA
WP_171470643.1\|2452682_2453345_-\|head,protease	HK97 family phage prohead protease	A0A1J0GUZ0	Halomonas_phage	1.6e-28	46.3

DBSCAN-SWA_6

3636076 : 3706987

Sulfolobus_monocaudavirus(25.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_171469279.1\|3636076_3637495_-\|transposase	IS66 family transposase	NA	NA	NA	NA
WP_171471526.1\|3638031_3639564_-	YifB family Mg chelatase-like AAA ATPase	NA	NA	NA	NA
WP_171471527.1\|3639836_3640556_-	hypothetical protein	NA	NA	NA	NA
WP_171471528.1\|3640770_3641580_+	polyprenol monophosphomannose synthase	A0A0N7A8R9	Sulfolobus_monocaudavirus	1.0e-32	39.8
WP_171471529.1\|3641829_3643728_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_171471530.1\|3644095_3644743_+	RNA polymerase sigma factor	NA	NA	NA	NA
WP_171471531.1\|3644773_3645169_+	hypothetical protein	NA	NA	NA	NA
WP_171471532.1\|3645165_3645822_+	hypothetical protein	NA	NA	NA	NA
WP_171471533.1\|3646174_3647743_+	HD domain-containing protein	NA	NA	NA	NA
WP_171471534.1\|3647843_3648371_-	hypothetical protein	NA	NA	NA	NA
WP_171471535.1\|3648502_3653353_+	DNA polymerase III subunit alpha	Q8W6C3	Saccharomonospora_phage	7.3e-147	25.6
WP_171471536.1\|3653444_3654128_-	FHA domain-containing protein	NA	NA	NA	NA
WP_171471537.1\|3654356_3655226_-	hypothetical protein	NA	NA	NA	NA
WP_171471538.1\|3655321_3655840_+	hypothetical protein	NA	NA	NA	NA
WP_171471539.1\|3656015_3656534_-	DUF1579 domain-containing protein	NA	NA	NA	NA
WP_171471540.1\|3656755_3660160_+	transcription-repair coupling factor	NA	NA	NA	NA
WP_171471541.1\|3660183_3660552_+	hypothetical protein	NA	NA	NA	NA
WP_171469279.1\|3660603_3662022_-\|transposase	IS66 family transposase	NA	NA	NA	NA
WP_171471542.1\|3662682_3663639_-	SUMF1/EgtB/PvdO family nonheme iron enzyme	A0A7H6	Microcystis_virus	4.3e-43	43.5
WP_171471543.1\|3663794_3664442_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_171471544.1\|3664894_3666103_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_171476060.1\|3666348_3667341_-	cysteine synthase A	A0A1X9I5K7	Streptococcus_phage	2.1e-77	50.0
WP_171471545.1\|3667585_3669472_+	hypothetical protein	NA	NA	NA	NA
WP_171471546.1\|3669496_3670102_-	Uma2 family endonuclease	NA	NA	NA	NA
WP_171471547.1\|3670164_3670584_-	hypothetical protein	NA	NA	NA	NA
WP_171471548.1\|3670704_3672126_-	DUF1501 domain-containing protein	NA	NA	NA	NA
WP_171471549.1\|3672301_3673027_+	DUF1080 domain-containing protein	NA	NA	NA	NA
WP_171471550.1\|3673061_3674513_+	MATE family efflux transporter	NA	NA	NA	NA
WP_171471551.1\|3675269_3676277_-	DUF1559 domain-containing protein	NA	NA	NA	NA
WP_171471552.1\|3676986_3678450_+\|transposase	IS66 family transposase	NA	NA	NA	NA
WP_171468987.1\|3679290_3679812_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_171468988.1\|3679859_3680534_+\|transposase	transposase	NA	NA	NA	NA
WP_171471553.1\|3681106_3682117_-	DUF1559 domain-containing protein	NA	NA	NA	NA
WP_171469279.1\|3682531_3683950_+\|transposase	IS66 family transposase	NA	NA	NA	NA
WP_171471554.1\|3684189_3685428_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_171471555.1\|3685493_3686561_+	VWA domain-containing protein	NA	NA	NA	NA
WP_171471556.1\|3686763_3687840_+	VWA domain-containing protein	NA	NA	NA	NA
WP_171471557.1\|3688009_3688909_+	hypothetical protein	NA	NA	NA	NA
WP_171471558.1\|3689053_3689986_+	hypothetical protein	NA	NA	NA	NA
WP_171471559.1\|3689982_3690792_+	hypothetical protein	NA	NA	NA	NA
WP_171471560.1\|3691009_3693124_-	CotH kinase family protein	NA	NA	NA	NA
WP_171476061.1\|3693171_3693417_-	hypothetical protein	NA	NA	NA	NA
WP_171471561.1\|3694218_3695490_-	ABC transporter permease	NA	NA	NA	NA
WP_171471562.1\|3697182_3699534_-	TolC family protein	NA	NA	NA	NA
WP_171471563.1\|3699952_3701401_-	DUF1501 domain-containing protein	NA	NA	NA	NA
WP_171471564.1\|3701390_3703919_-	DUF1553 domain-containing protein	NA	NA	NA	NA
WP_171471565.1\|3704289_3704580_+	hypothetical protein	NA	NA	NA	NA
WP_171476062.1\|3704673_3704931_-	hypothetical protein	NA	NA	NA	NA
WP_171476063.1\|3705212_3705551_-	HNH endonuclease	NA	NA	NA	NA
WP_171468952.1\|3705610_3706987_+\|transposase	IS66 family transposase	NA	NA	NA	NA

DBSCAN-SWA_7

4898680 : 4946922

Acanthamoeba_polyphaga_moumouvirus(25.0%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_171469279.1\|4898680_4900099_+\|transposase	IS66 family transposase	NA	NA	NA	NA
WP_171472454.1\|4900255_4901266_+	hypothetical protein	NA	NA	NA	NA
WP_171472455.1\|4901270_4901834_-	DUF4287 domain-containing protein	NA	NA	NA	NA
WP_171472456.1\|4902208_4903009_-	RNA methyltransferase	NA	NA	NA	NA
WP_171472457.1\|4904901_4906650_+	serine/threonine protein kinase	NA	NA	NA	NA
WP_171472458.1\|4906680_4906965_+	hypothetical protein	NA	NA	NA	NA
WP_171472459.1\|4907179_4909138_+	serine/threonine protein kinase	L7RGQ5	Acanthamoeba_polyphaga_moumouvirus	1.1e-16	28.4
WP_171472460.1\|4909134_4909830_+	hypothetical protein	NA	NA	NA	NA
WP_171472461.1\|4909965_4911507_+\|tRNA	proline--tRNA ligase	A0A2K9L0T2	Tupanvirus	4.5e-82	35.3
WP_171472462.1\|4911546_4912467_+	hypothetical protein	NA	NA	NA	NA
WP_171472463.1\|4912554_4912824_-	50S ribosomal protein L27	NA	NA	NA	NA
WP_171472464.1\|4913342_4914653_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_171472465.1\|4914725_4915970_+	PQQ-binding-like beta-propeller repeat protein	NA	NA	NA	NA
WP_171472466.1\|4917718_4918102_+	hypothetical protein	NA	NA	NA	NA
WP_171472467.1\|4918284_4918629_-\|transposase	transposase	NA	NA	NA	NA
WP_171472468.1\|4918656_4918818_-	hypothetical protein	NA	NA	NA	NA
WP_171469887.1\|4919324_4919870_-\|transposase	transposase	NA	NA	NA	NA
WP_171469888.1\|4919893_4920355_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_171472469.1\|4920491_4920866_-	hypothetical protein	NA	NA	NA	NA
WP_171472470.1\|4920930_4921713_+	hypothetical protein	NA	NA	NA	NA
WP_171472471.1\|4922033_4922810_-	NIPSNAP family protein	NA	NA	NA	NA
WP_171472472.1\|4923202_4923826_+	hypothetical protein	NA	NA	NA	NA
WP_171472473.1\|4924186_4925023_+	hypothetical protein	NA	NA	NA	NA
WP_171472474.1\|4925292_4926348_-	TlpA family protein disulfide reductase	NA	NA	NA	NA
WP_171472475.1\|4926907_4927255_-	hypothetical protein	NA	NA	NA	NA
WP_171472476.1\|4927429_4927651_+	hypothetical protein	NA	NA	NA	NA
WP_171472477.1\|4927746_4928121_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	E7DN65	Pneumococcus_phage	3.8e-19	48.0
WP_171472478.1\|4928549_4931585_-	hypothetical protein	NA	NA	NA	NA
WP_171472479.1\|4931782_4936753_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_171472480.1\|4937665_4937863_+	hypothetical protein	NA	NA	NA	NA
WP_171472481.1\|4938084_4939365_+	LPS export ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	1.3e-18	30.9
WP_171472482.1\|4939456_4939933_+	DinB family protein	NA	NA	NA	NA
WP_171472483.1\|4940268_4941930_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_171472484.1\|4942063_4943110_+	hypothetical protein	NA	NA	NA	NA
WP_171472485.1\|4943147_4944032_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_171472486.1\|4944061_4944337_-\|transposase	transposase	NA	NA	NA	NA
WP_171468866.1\|4944420_4944768_+	hypothetical protein	NA	NA	NA	NA
WP_171468900.1\|4944761_4945139_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_171468899.1\|4945152_4946709_+\|transposase	IS66 family transposase	NA	NA	NA	NA
WP_171472487.1\|4946748_4946922_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_8

5046221 : 5123130

Planktothrix_phage(16.67%)

transposase,protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_171472542.1\|5046221_5047169_+\|tRNA	tRNA glutamyl-Q(34) synthetase GluQRS	NA	NA	NA	NA
WP_171472543.1\|5047713_5047983_-	hypothetical protein	NA	NA	NA	NA
WP_171472544.1\|5048553_5049222_-	LON peptidase substrate-binding domain-containing protein	NA	NA	NA	NA
WP_171472545.1\|5049218_5049605_-	DUF309 domain-containing protein	NA	NA	NA	NA
WP_171472546.1\|5049774_5050809_+	type II secretion system F family protein	NA	NA	NA	NA
WP_171472547.1\|5050974_5052693_-	glycosyltransferase family 39 protein	NA	NA	NA	NA
WP_171472548.1\|5052893_5054093_+	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_171468949.1\|5054324_5054858_-\|transposase	IS1595 family transposase	NA	NA	NA	NA
WP_171472549.1\|5055545_5057051_+	hypothetical protein	NA	NA	NA	NA
WP_171472550.1\|5057217_5058609_-	ABC transporter permease	NA	NA	NA	NA
WP_171472551.1\|5059954_5060641_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	7.4e-29	34.6
WP_171472552.1\|5061141_5062812_-	energy-dependent translational throttle protein EttA	A0A2K9L3Z8	Tupanvirus	3.0e-39	27.3
WP_171472553.1\|5062962_5063538_+	hypothetical protein	NA	NA	NA	NA
WP_171472554.1\|5063605_5064586_-	DUF1559 domain-containing protein	NA	NA	NA	NA
WP_171476111.1\|5064585_5065218_-	hypothetical protein	NA	NA	NA	NA
WP_171472555.1\|5065555_5065888_+\|protease	ATP-dependent Clp protease adaptor ClpS	NA	NA	NA	NA
WP_171472556.1\|5065952_5066876_-	TIM barrel protein	NA	NA	NA	NA
WP_171472557.1\|5067171_5067396_-	hypothetical protein	NA	NA	NA	NA
WP_171472558.1\|5067668_5068961_-	glucose-1-phosphate adenylyltransferase	I7I009	Enterobacteria_phage	2.2e-05	25.5
WP_171472559.1\|5069217_5069757_-	hypothetical protein	NA	NA	NA	NA
WP_171472560.1\|5070177_5071140_-	hypothetical protein	NA	NA	NA	NA
WP_171472561.1\|5071414_5072716_+	VCBS repeat-containing protein	NA	NA	NA	NA
WP_171472562.1\|5072718_5074023_+	DUF2029 domain-containing protein	NA	NA	NA	NA
WP_171472563.1\|5074091_5074598_+	acetolactate synthase small subunit	NA	NA	NA	NA
WP_171472564.1\|5074716_5075022_+	hypothetical protein	NA	NA	NA	NA
WP_171472565.1\|5075230_5077861_-	hypothetical protein	NA	NA	NA	NA
WP_171468899.1\|5077913_5079470_-\|transposase	IS66 family transposase	NA	NA	NA	NA
WP_171468900.1\|5079483_5079861_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_171468866.1\|5079854_5080202_-	hypothetical protein	NA	NA	NA	NA
WP_171472566.1\|5080170_5080854_-	Tad domain-containing protein	NA	NA	NA	NA
WP_171472567.1\|5081611_5082061_-	hypothetical protein	NA	NA	NA	NA
WP_171472568.1\|5082238_5083066_+	metallophosphoesterase	NA	NA	NA	NA
WP_171472569.1\|5083154_5083691_-	hypothetical protein	NA	NA	NA	NA
WP_171472570.1\|5083852_5084386_-	hypothetical protein	NA	NA	NA	NA
WP_171472571.1\|5084521_5085757_+	MFS transporter	NA	NA	NA	NA
WP_171472572.1\|5085937_5086705_+	SDR family oxidoreductase	A0A0K0KVL6	Prochlorococcus_phage	1.3e-05	26.1
WP_171472573.1\|5086920_5089569_+	pre-peptidase C-terminal domain-containing protein	NA	NA	NA	NA
WP_171472574.1\|5089944_5091438_+	NB-ARC domain protein	NA	NA	NA	NA
WP_171472575.1\|5092001_5095328_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_171472576.1\|5095456_5096305_+	hypothetical protein	NA	NA	NA	NA
WP_171472577.1\|5096515_5099377_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_171472578.1\|5099580_5102916_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_171472579.1\|5103138_5104746_-	HEAT repeat domain-containing protein	NA	NA	NA	NA
WP_171472580.1\|5105045_5106968_+	trypsin-like peptidase domain-containing protein	A0A1B1IRH0	uncultured_Mediterranean_phage	1.1e-05	27.2
WP_171472581.1\|5107154_5107922_-	HEAT repeat domain-containing protein	NA	NA	NA	NA
WP_171472582.1\|5108832_5109522_+	hypothetical protein	NA	NA	NA	NA
WP_171472583.1\|5109719_5110796_+	hypothetical protein	NA	NA	NA	NA
WP_171472584.1\|5110850_5111912_-	TIGR02996 domain-containing protein	NA	NA	NA	NA
WP_171468866.1\|5113144_5113492_+	hypothetical protein	NA	NA	NA	NA
WP_171468900.1\|5113485_5113863_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_171468899.1\|5113876_5115433_+\|transposase	IS66 family transposase	NA	NA	NA	NA
WP_171468898.1\|5115716_5117273_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	2.4e-59	31.7
WP_171468897.1\|5117644_5118847_+	hypothetical protein	NA	NA	NA	NA
WP_171472585.1\|5120098_5120296_-	hypothetical protein	NA	NA	NA	NA
WP_171472586.1\|5120402_5120708_-	hypothetical protein	NA	NA	NA	NA
WP_171475904.1\|5120933_5121176_-	hypothetical protein	NA	NA	NA	NA
WP_171468952.1\|5121753_5123130_-\|transposase	IS66 family transposase	NA	NA	NA	NA

DBSCAN-SWA_9

6515027 : 6558845

Shigella_phage(20.0%)

transposase,integrase

attL 6514960:6515019|attR 6558854:6561287

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
6514960:6515019	attL	NA	NA	NA	NA
WP_171468899.1\|6515027_6516584_-\|transposase	IS66 family transposase	NA	NA	NA	NA
WP_171468900.1\|6516597_6516975_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_171468866.1\|6516968_6517316_-	hypothetical protein	NA	NA	NA	NA
WP_171473609.1\|6517990_6518680_+	hypothetical protein	NA	NA	NA	NA
WP_171473610.1\|6518864_6519827_+	DUF1573 domain-containing protein	NA	NA	NA	NA
WP_171473611.1\|6519831_6520734_+	DUF1559 domain-containing protein	NA	NA	NA	NA
WP_171473612.1\|6520751_6521588_+	DUF1573 domain-containing protein	NA	NA	NA	NA
WP_171473613.1\|6521626_6522958_-\|transposase	transposase	NA	NA	NA	NA
WP_171473614.1\|6523732_6523984_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_171473615.1\|6523976_6524360_+	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_171473616.1\|6524532_6525156_+	recombinase family protein	A0A0C4UR34	Shigella_phage	9.7e-36	51.9
WP_171473617.1\|6525155_6525506_+	WGR domain-containing protein	NA	NA	NA	NA
WP_171473618.1\|6525782_6526532_+	hypothetical protein	NA	NA	NA	NA
WP_171473619.1\|6526541_6527288_-	TIGR02996 domain-containing protein	NA	NA	NA	NA
WP_171473620.1\|6527492_6528071_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_171473621.1\|6528143_6531167_+	protein kinase	A0A291AU40	Pandoravirus	2.1e-14	26.5
WP_171473622.1\|6531437_6532259_+	ParB/RepB/Spo0J family partition protein	NA	NA	NA	NA
WP_171473623.1\|6532330_6533758_+	type IV secretory system conjugative DNA transfer family protein	NA	NA	NA	NA
WP_171473624.1\|6533760_6534363_+	hypothetical protein	NA	NA	NA	NA
WP_171468880.1\|6534656_6534920_+	hypothetical protein	NA	NA	NA	NA
WP_171473625.1\|6535180_6535405_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_171473626.1\|6535460_6536513_-\|integrase	site-specific integrase	A0A221SAN4	Ralstonia_phage	2.4e-10	30.8
WP_171473627.1\|6537325_6538402_+	hypothetical protein	NA	NA	NA	NA
WP_171473628.1\|6538412_6539036_+	RHS repeat-associated core domain-containing protein	NA	NA	NA	NA
WP_171473629.1\|6539058_6539574_-\|transposase	transposase	NA	NA	NA	NA
WP_171473630.1\|6539597_6539942_-	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_171473631.1\|6540143_6540653_+	hypothetical protein	NA	NA	NA	NA
WP_171473632.1\|6540682_6540841_-	hypothetical protein	NA	NA	NA	NA
WP_171473633.1\|6540878_6541463_+	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_171473634.1\|6541386_6542907_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_171473635.1\|6543076_6543946_-\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_171473636.1\|6544450_6552190_-	hypothetical protein	A0A2P1A0R6	Gordonia_phage	7.4e-08	42.7
WP_171473637.1\|6553662_6554586_+	hypothetical protein	A0A0U4J920	Pseudomonas_phage	6.9e-22	32.1
WP_171473638.1\|6555087_6556341_+	group II intron reverse transcriptase/maturase	NA	NA	NA	NA
WP_171468866.1\|6556556_6556904_+	hypothetical protein	NA	NA	NA	NA
WP_171468900.1\|6556897_6557275_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_171468899.1\|6557288_6558845_+\|transposase	IS66 family transposase	NA	NA	NA	NA
6558854:6561287	attR	NA	NA	NA	NA

DBSCAN-SWA_10

6692107 : 6741000

Virus_Rctr41k(16.67%)

transposase,integrase,terminase

attL 6693703:6693724|attR 6737512:6737533

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_171469116.1\|6692107_6692482_-\|transposase	IS1 family transposase	NA	NA	NA	NA
WP_171473726.1\|6693405_6693699_-	hypothetical protein	NA	NA	NA	NA
6693703:6693724	attL	NA	NA	NA	NA
WP_171473727.1\|6694254_6694899_-	hypothetical protein	NA	NA	NA	NA
WP_171475904.1\|6695297_6695540_-	hypothetical protein	NA	NA	NA	NA
WP_171468952.1\|6696117_6697494_-\|transposase	IS66 family transposase	NA	NA	NA	NA
WP_171473728.1\|6697868_6698297_-	hypothetical protein	NA	NA	NA	NA
WP_171473729.1\|6698474_6698951_-	hypothetical protein	NA	NA	NA	NA
WP_171473730.1\|6699041_6699731_-	suppressor of fused domain protein	NA	NA	NA	NA
WP_171473731.1\|6699846_6700320_-	hypothetical protein	NA	NA	NA	NA
WP_171473732.1\|6700413_6701118_-	hypothetical protein	NA	NA	NA	NA
WP_171473733.1\|6701670_6702126_-	hypothetical protein	NA	NA	NA	NA
WP_171473734.1\|6703925_6704333_-	hypothetical protein	NA	NA	NA	NA
WP_171473735.1\|6704478_6705048_-	hypothetical protein	NA	NA	NA	NA
WP_171473736.1\|6705196_6706189_-\|integrase	integron integrase	A0A1P8DJJ6	Virus_Rctr41k	2.0e-59	45.6
WP_171473737.1\|6706422_6706650_+	hypothetical protein	NA	NA	NA	NA
WP_171473738.1\|6707286_6707697_-	hypothetical protein	NA	NA	NA	NA
WP_171473739.1\|6707891_6708353_-	hypothetical protein	NA	NA	NA	NA
WP_171473740.1\|6708449_6708773_-	hypothetical protein	NA	NA	NA	NA
WP_171473741.1\|6708800_6709109_-	hypothetical protein	NA	NA	NA	NA
WP_171473742.1\|6709468_6710842_-	DUF4832 domain-containing protein	NA	NA	NA	NA
WP_171473743.1\|6711291_6712869_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_171473744.1\|6712769_6713435_-	hypothetical protein	NA	NA	NA	NA
WP_171473745.1\|6713502_6714396_-	serine/threonine protein kinase	A0A291ATM2	Pandoravirus	9.7e-05	27.1
WP_171473746.1\|6714681_6715272_-	hypothetical protein	A0A1W6JNS2	Morganella_phage	1.3e-05	32.6
WP_171473747.1\|6715572_6715806_+	hypothetical protein	NA	NA	NA	NA
WP_171473748.1\|6715956_6716187_+	hypothetical protein	NA	NA	NA	NA
WP_171473749.1\|6716439_6717075_+	hypothetical protein	NA	NA	NA	NA
WP_171473750.1\|6717196_6717733_+	TIGR02996 domain-containing protein	NA	NA	NA	NA
WP_171473751.1\|6717913_6720040_+	AAA family ATPase	NA	NA	NA	NA
WP_171473752.1\|6720316_6721570_-	hypothetical protein	NA	NA	NA	NA
WP_171473753.1\|6721868_6723191_-	hypothetical protein	NA	NA	NA	NA
WP_171473754.1\|6723475_6724168_+	hypothetical protein	NA	NA	NA	NA
WP_171473755.1\|6724326_6724809_+\|terminase	terminase small subunit	I6NV32	Burkholderia_virus	8.1e-14	57.7
WP_171476176.1\|6724705_6726238_+	hypothetical protein	A0A2H4KIR6	Gemmata_phage	8.1e-68	34.4
WP_171473756.1\|6726517_6727108_-	dCTP deaminase	NA	NA	NA	NA
WP_171473757.1\|6727104_6727380_-	hypothetical protein	NA	NA	NA	NA
WP_171473758.1\|6727842_6728934_-	hypothetical protein	NA	NA	NA	NA
WP_171473759.1\|6728827_6729220_-	hypothetical protein	NA	NA	NA	NA
WP_171473760.1\|6730594_6730798_-	hypothetical protein	NA	NA	NA	NA
WP_171473761.1\|6730787_6732875_-	patatin-like phospholipase family protein	NA	NA	NA	NA
WP_171473762.1\|6733039_6733438_-	hypothetical protein	NA	NA	NA	NA
WP_171473763.1\|6733612_6735130_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_171473764.1\|6735202_6735670_-	TIGR03067 domain-containing protein	NA	NA	NA	NA
WP_171473765.1\|6735824_6736049_-	hypothetical protein	NA	NA	NA	NA
WP_171470138.1\|6736326_6737373_-\|transposase	IS630 family transposase	S5VXX4	Leptospira_phage	4.1e-39	27.8
WP_171473766.1\|6737635_6738175_-	TIGR03067 domain-containing protein	NA	NA	NA	NA
6737512:6737533	attR	NA	NA	NA	NA
WP_171473767.1\|6738703_6739945_+	hypothetical protein	NA	NA	NA	NA
WP_171468988.1\|6740325_6741000_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_11

6744102 : 6784422

Leptospira_phage(80.0%)

transposase,portal

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_171473772.1\|6744102_6744522_+\|transposase	transposase	S5VXX4	Leptospira_phage	2.5e-11	28.9
WP_171473773.1\|6744672_6745776_-\|transposase	IS66 family transposase	NA	NA	NA	NA
WP_171468900.1\|6746242_6746620_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_171468866.1\|6746613_6746961_-	hypothetical protein	NA	NA	NA	NA
WP_171473774.1\|6747174_6747417_-	hypothetical protein	NA	NA	NA	NA
WP_171473775.1\|6747731_6748991_+\|transposase	IS66 family transposase	S5VLC8	Leptospira_phage	7.5e-27	29.4
WP_171468881.1\|6748987_6749311_+\|transposase	transposase	NA	NA	NA	NA
WP_171473776.1\|6749438_6750362_-	hypothetical protein	NA	NA	NA	NA
WP_171473777.1\|6750653_6752561_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_171473778.1\|6753488_6753779_-	hypothetical protein	NA	NA	NA	NA
WP_171473613.1\|6753920_6755252_+\|transposase	transposase	NA	NA	NA	NA
WP_171473779.1\|6755255_6755804_-	hypothetical protein	NA	NA	NA	NA
WP_171473780.1\|6756018_6757107_+\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_171473781.1\|6757536_6757968_-	hypothetical protein	NA	NA	NA	NA
WP_171473782.1\|6759440_6760544_-	hypothetical protein	NA	NA	NA	NA
WP_171473783.1\|6760603_6760792_-	DUF3859 domain-containing protein	NA	NA	NA	NA
WP_171473784.1\|6761215_6761866_+	hypothetical protein	NA	NA	NA	NA
WP_171473785.1\|6762162_6762483_-	hypothetical protein	NA	NA	NA	NA
WP_171473786.1\|6762586_6763027_-	DUF2809 domain-containing protein	NA	NA	NA	NA
WP_171473787.1\|6763551_6766359_+\|portal	phage portal protein	NA	NA	NA	NA
WP_171473788.1\|6766388_6766700_+	hypothetical protein	NA	NA	NA	NA
WP_171473789.1\|6766729_6767041_+	hypothetical protein	NA	NA	NA	NA
WP_171473790.1\|6767059_6768214_-	hypothetical protein	NA	NA	NA	NA
WP_171473791.1\|6768161_6768533_-	hypothetical protein	NA	NA	NA	NA
WP_171473792.1\|6768501_6769572_-	hypothetical protein	NA	NA	NA	NA
WP_171473793.1\|6769871_6770417_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_171473794.1\|6770893_6771445_-	hypothetical protein	NA	NA	NA	NA
WP_171473795.1\|6771567_6772737_+	hypothetical protein	NA	NA	NA	NA
WP_171473796.1\|6772830_6773604_+	hypothetical protein	NA	NA	NA	NA
WP_171473797.1\|6773810_6774224_+	hypothetical protein	NA	NA	NA	NA
WP_171470138.1\|6774281_6775328_+\|transposase	IS630 family transposase	S5VXX4	Leptospira_phage	4.1e-39	27.8
WP_171473798.1\|6776479_6776851_+	hypothetical protein	NA	NA	NA	NA
WP_171473799.1\|6776872_6777949_+	hypothetical protein	A0A0H3TLL3	Faustovirus	4.0e-05	37.8
WP_171473800.1\|6777962_6778175_+	hypothetical protein	NA	NA	NA	NA
WP_171473801.1\|6778178_6778523_+	hypothetical protein	NA	NA	NA	NA
WP_171473802.1\|6778530_6778980_+	hypothetical protein	NA	NA	NA	NA
WP_171470556.1\|6779094_6780141_+\|transposase	IS630 family transposase	S5VXX4	Leptospira_phage	1.1e-39	28.4
WP_171473803.1\|6780231_6780468_+	hypothetical protein	NA	NA	NA	NA
WP_171473804.1\|6780471_6780957_+	hypothetical protein	NA	NA	NA	NA
WP_171473805.1\|6780959_6781334_+	hypothetical protein	NA	NA	NA	NA
WP_171473806.1\|6781340_6781817_+	hypothetical protein	NA	NA	NA	NA
WP_171473807.1\|6781858_6782092_+	hypothetical protein	NA	NA	NA	NA
WP_171468866.1\|6782133_6782481_+	hypothetical protein	NA	NA	NA	NA
WP_171468900.1\|6782474_6782852_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_171468899.1\|6782865_6784422_+\|transposase	IS66 family transposase	NA	NA	NA	NA

DBSCAN-SWA_12

7101547 : 7161543

Bacillus_phage(50.0%)

transposase,integrase,holin

attL 7127017:7127033|attR 7167036:7167052

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_171473780.1\|7101547_7102636_+\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_171474057.1\|7104230_7104635_-	response regulator	NA	NA	NA	NA
WP_171474058.1\|7105008_7105629_-	response regulator	NA	NA	NA	NA
WP_171474059.1\|7105908_7106523_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_171474060.1\|7106915_7107515_+	hypothetical protein	NA	NA	NA	NA
WP_171474061.1\|7107659_7108583_+	YihY/virulence factor BrkB family protein	NA	NA	NA	NA
WP_171474062.1\|7108666_7110547_+	alpha amylase C-terminal domain-containing protein	NA	NA	NA	NA
WP_171474063.1\|7110564_7111077_+	hypothetical protein	NA	NA	NA	NA
WP_171474064.1\|7111271_7111703_+\|holin	phage holin family protein	NA	NA	NA	NA
WP_171474065.1\|7111687_7112332_+	hypothetical protein	NA	NA	NA	NA
WP_171474066.1\|7112995_7114324_-	PQQ-like beta-propeller repeat protein	NA	NA	NA	NA
WP_171474067.1\|7114427_7117397_-	c-type cytochrome	NA	NA	NA	NA
WP_171474068.1\|7117503_7118358_+	phytanoyl-CoA dioxygenase family protein	NA	NA	NA	NA
WP_171474069.1\|7118251_7119847_-	YXWGXW repeat-containing protein	NA	NA	NA	NA
WP_171474070.1\|7119938_7120799_-	sugar phosphate isomerase/epimerase	NA	NA	NA	NA
WP_171476191.1\|7120902_7122102_-	inositol-3-phosphate synthase	NA	NA	NA	NA
WP_171474071.1\|7122341_7123427_-	3-dehydroquinate synthase	NA	NA	NA	NA
WP_171474072.1\|7123523_7126067_+	ComEC/Rec2 family competence protein	NA	NA	NA	NA
WP_171474073.1\|7126106_7127057_-	hypothetical protein	NA	NA	NA	NA
7127017:7127033	attL	NA	NA	NA	NA
WP_171474074.1\|7127155_7127710_-	RNA polymerase sigma factor	NA	NA	NA	NA
WP_171468988.1\|7128438_7129113_+\|transposase	transposase	NA	NA	NA	NA
WP_171474075.1\|7130281_7130554_+	WXG100 family type VII secretion target	NA	NA	NA	NA
WP_171474076.1\|7130621_7131248_+	hypothetical protein	NA	NA	NA	NA
WP_171474077.1\|7131244_7131466_+	hypothetical protein	NA	NA	NA	NA
WP_171474078.1\|7131501_7135416_+	cell division protein FtsK	A0A0S2GLG9	Bacillus_phage	7.3e-12	26.6
WP_171474079.1\|7135512_7136670_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_171474080.1\|7136666_7137659_+	NAD-dependent epimerase/dehydratase family protein	M4QPK0	Synechococcus_phage	1.6e-08	35.6
WP_171474081.1\|7137869_7139903_+	squalene--hopene cyclase	NA	NA	NA	NA
WP_171474082.1\|7140062_7141082_+	adenosyl-hopene transferase HpnH	NA	NA	NA	NA
WP_171474083.1\|7141078_7141702_+	hypothetical protein	NA	NA	NA	NA
WP_171474084.1\|7141839_7143756_-	NAD-binding protein	NA	NA	NA	NA
WP_171476192.1\|7143849_7144188_+	(2Fe-2S)-binding protein	NA	NA	NA	NA
WP_171474085.1\|7144280_7145384_-	DUF1573 domain-containing protein	NA	NA	NA	NA
WP_171474086.1\|7145592_7146453_-	sugar phosphate isomerase/epimerase	NA	NA	NA	NA
WP_171474087.1\|7147035_7147287_+	hypothetical protein	NA	NA	NA	NA
WP_171474088.1\|7147495_7148887_+\|transposase	transposase	NA	NA	NA	NA
WP_171476193.1\|7148989_7150141_-\|integrase	site-specific integrase	NA	NA	NA	NA
WP_171474089.1\|7151210_7152197_+	DUF1559 domain-containing protein	NA	NA	NA	NA
WP_171474090.1\|7152231_7156191_+	cobaltochelatase subunit CobN	NA	NA	NA	NA
WP_171476194.1\|7156225_7156837_+	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA
WP_171474091.1\|7156808_7157138_+	DUF2149 domain-containing protein	NA	NA	NA	NA
WP_171474092.1\|7157152_7157485_-	TfoX/Sxy family protein	NA	NA	NA	NA
WP_171474093.1\|7158088_7158499_+	rhodanese-like domain-containing protein	NA	NA	NA	NA
WP_171476195.1\|7158578_7159382_-	esterase family protein	NA	NA	NA	NA
WP_171474094.1\|7160098_7160644_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_171468988.1\|7160868_7161543_-\|transposase	transposase	NA	NA	NA	NA
7167036:7167052	attR	NA	NA	NA	NA

DBSCAN-SWA_13

8315582 : 8378413

Moraxella_phage(14.29%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_171474855.1\|8315582_8316590_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	7.2e-65	47.8
WP_171474856.1\|8316586_8318314_-	serine/threonine protein kinase	A0A2H4UVE2	Bodo_saltans_virus	2.6e-14	26.1
WP_171474857.1\|8318574_8319324_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_171474858.1\|8319327_8319876_-	DUF4240 domain-containing protein	NA	NA	NA	NA
WP_171474859.1\|8319911_8320460_-	DUF4240 domain-containing protein	NA	NA	NA	NA
WP_171474860.1\|8320456_8320996_-	Uma2 family endonuclease	NA	NA	NA	NA
WP_171474861.1\|8321017_8322289_-	hypothetical protein	NA	NA	NA	NA
WP_171476236.1\|8322310_8323171_-	TatD family hydrolase	NA	NA	NA	NA
WP_171474862.1\|8323478_8324003_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_171476237.1\|8324621_8325068_+	VOC family protein	NA	NA	NA	NA
WP_171476238.1\|8325581_8326400_-	SRPBCC domain-containing protein	NA	NA	NA	NA
WP_171476239.1\|8326483_8327305_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_171474863.1\|8327373_8328009_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_171474864.1\|8328323_8329067_+	hypothetical protein	NA	NA	NA	NA
WP_171474865.1\|8329063_8330026_+	WD40 repeat domain-containing protein	NA	NA	NA	NA
WP_171474866.1\|8330070_8331009_+	aldo/keto reductase	NA	NA	NA	NA
WP_171474867.1\|8331011_8331398_-	VOC family protein	NA	NA	NA	NA
WP_171470047.1\|8331597_8332989_+\|transposase	transposase	NA	NA	NA	NA
WP_171474868.1\|8333243_8333696_-	hypothetical protein	NA	NA	NA	NA
WP_171474869.1\|8334481_8336596_-	hypothetical protein	NA	NA	NA	NA
WP_171474870.1\|8337419_8338148_-	esterase family protein	NA	NA	NA	NA
WP_171474871.1\|8338243_8338843_-	GDSL family lipase	NA	NA	NA	NA
WP_171474872.1\|8339078_8339981_+	TIM barrel protein	NA	NA	NA	NA
WP_171474873.1\|8340055_8340400_-	hypothetical protein	NA	NA	NA	NA
WP_171474874.1\|8340736_8341399_-	SOS response-associated peptidase	NA	NA	NA	NA
WP_171474875.1\|8341735_8342962_+	TIGR03067 domain-containing protein	NA	NA	NA	NA
WP_171474876.1\|8343266_8346539_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_171474877.1\|8346748_8347513_-	hypothetical protein	NA	NA	NA	NA
WP_171474878.1\|8347851_8348661_+	hypothetical protein	NA	NA	NA	NA
WP_171474879.1\|8348923_8349859_-	response regulator	NA	NA	NA	NA
WP_171469279.1\|8351693_8353112_-\|transposase	IS66 family transposase	NA	NA	NA	NA
WP_171474880.1\|8353745_8354171_-	DUF2493 domain-containing protein	A0A0S2MWK3	Cellulophaga_phage	1.8e-09	28.1
WP_171474881.1\|8354358_8354973_-	hypothetical protein	NA	NA	NA	NA
WP_171474882.1\|8354982_8355486_-	DUF4231 domain-containing protein	NA	NA	NA	NA
WP_171474883.1\|8355645_8355939_-	SOS response-associated peptidase family protein	NA	NA	NA	NA
WP_171474884.1\|8355951_8356308_-	SOS response-associated peptidase	NA	NA	NA	NA
WP_171474885.1\|8356493_8356664_+	TIGR02996 domain-containing protein	NA	NA	NA	NA
WP_171474886.1\|8356809_8359170_+	autotransporter-associated beta strand repeat-containing protein	NA	NA	NA	NA
WP_171474887.1\|8359119_8359269_-	TIGR02996 domain-containing protein	NA	NA	NA	NA
WP_171474888.1\|8359265_8359565_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_171474889.1\|8359690_8360035_+	hypothetical protein	NA	NA	NA	NA
WP_171468866.1\|8360527_8360875_+	hypothetical protein	NA	NA	NA	NA
WP_171468900.1\|8360868_8361246_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_171468899.1\|8361259_8362816_+\|transposase	IS66 family transposase	NA	NA	NA	NA
WP_171474890.1\|8363035_8363230_-	hypothetical protein	NA	NA	NA	NA
WP_171474891.1\|8363430_8363877_-	hypothetical protein	NA	NA	NA	NA
WP_171474892.1\|8364300_8364600_-	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
WP_171474893.1\|8364609_8365134_-	Fe-S protein assembly co-chaperone HscB	NA	NA	NA	NA
WP_171474894.1\|8365223_8365637_-	iron-sulfur cluster assembly accessory protein	A0A1B1IT29	uncultured_Mediterranean_phage	1.4e-14	39.3
WP_171474895.1\|8365715_8366150_-	Fe-S cluster assembly scaffold IscU	A0A218MKD1	uncultured_virus	1.4e-49	77.2
WP_171474896.1\|8366265_8367483_-	IscS subfamily cysteine desulfurase	H7BUW1	unidentified_phage	5.9e-37	39.7
WP_171474897.1\|8367527_8368031_-	Rrf2 family transcriptional regulator	NA	NA	NA	NA
WP_171474898.1\|8368274_8369561_+	hypothetical protein	NA	NA	NA	NA
WP_171474899.1\|8369588_8370449_+	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_171474900.1\|8373400_8373907_+	hypothetical protein	NA	NA	NA	NA
WP_171474901.1\|8374094_8374331_+	30S ribosomal protein S21	NA	NA	NA	NA
WP_171470138.1\|8374533_8375580_+\|transposase	IS630 family transposase	S5VXX4	Leptospira_phage	4.1e-39	27.8
WP_171474902.1\|8375965_8377036_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_171474903.1\|8377137_8377563_+	hypothetical protein	NA	NA	NA	NA
WP_171468988.1\|8377738_8378413_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_14

9644606 : 9688555

Bacillus_phage(50.0%)

transposase,integrase

attL 9658317:9658332|attR 9672329:9672344

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_171476289.1\|9644606_9645662_+\|integrase	tyrosine-type recombinase/integrase	A0A1P8DJ76	Virus_Rctr85	1.1e-12	27.3
WP_171475756.1\|9646213_9646600_+	hypothetical protein	NA	NA	NA	NA
WP_171475757.1\|9646648_9647656_-\|integrase	tyrosine-type recombinase/integrase	A0A142F1N9	Bacillus_phage	7.3e-17	26.0
WP_171476290.1\|9647652_9648588_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_171475758.1\|9648602_9649841_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_171475759.1\|9649991_9650255_+	hypothetical protein	NA	NA	NA	NA
WP_171475760.1\|9650886_9651636_+	hypothetical protein	NA	NA	NA	NA
WP_171475761.1\|9651787_9652135_+	hypothetical protein	NA	NA	NA	NA
WP_171475762.1\|9652350_9653343_+	hypothetical protein	NA	NA	NA	NA
WP_171475763.1\|9653859_9654585_+	hypothetical protein	NA	NA	NA	NA
WP_171475764.1\|9654614_9654830_-	hypothetical protein	NA	NA	NA	NA
WP_171475765.1\|9655678_9655957_+	CopG family transcriptional regulator	NA	NA	NA	NA
WP_171475766.1\|9656024_9657401_+	relaxase domain-containing protein	NA	NA	NA	NA
WP_171475767.1\|9657403_9657685_+	hypothetical protein	NA	NA	NA	NA
WP_171475768.1\|9657681_9659016_+	type IV secretion system DNA-binding domain-containing protein	NA	NA	NA	NA
9658317:9658332	attL	NA	NA	NA	NA
WP_171475769.1\|9659058_9659784_+	hypothetical protein	NA	NA	NA	NA
WP_171475770.1\|9659842_9660031_+	hypothetical protein	NA	NA	NA	NA
WP_171475771.1\|9660085_9660274_+	hypothetical protein	NA	NA	NA	NA
WP_171475772.1\|9660335_9661208_+	phage Gp37/Gp68 family protein	W0LPY2	Mycobacterium_phage	4.1e-56	42.0
WP_171475773.1\|9661367_9661565_+	hypothetical protein	NA	NA	NA	NA
WP_171475774.1\|9661564_9661852_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_171475775.1\|9661778_9662921_-\|integrase	site-specific integrase	NA	NA	NA	NA
WP_171475776.1\|9663416_9663707_+	hypothetical protein	NA	NA	NA	NA
WP_171475777.1\|9664825_9665602_-	hypothetical protein	NA	NA	NA	NA
WP_171475778.1\|9665685_9665859_-	hypothetical protein	NA	NA	NA	NA
WP_171476291.1\|9665911_9666817_-	restriction endonuclease	NA	NA	NA	NA
WP_171475779.1\|9667127_9668741_-	ATP-binding protein	NA	NA	NA	NA
WP_171475780.1\|9668846_9669386_+	DUF1801 domain-containing protein	NA	NA	NA	NA
WP_171475781.1\|9669382_9669838_+	GyrI-like domain-containing protein	NA	NA	NA	NA
WP_171475782.1\|9670127_9670703_-	hypothetical protein	NA	NA	NA	NA
WP_171475783.1\|9670863_9671559_+	VIT1/CCC1 transporter family protein	NA	NA	NA	NA
WP_171475784.1\|9671732_9672548_+	methyltransferase domain-containing protein	NA	NA	NA	NA
9672329:9672344	attR	NA	NA	NA	NA
WP_171475785.1\|9672579_9672930_+	hypothetical protein	NA	NA	NA	NA
WP_171475786.1\|9673026_9673704_+	haloacid dehalogenase type II	NA	NA	NA	NA
WP_171475787.1\|9673914_9678618_+	response regulator	W8CYF6	Bacillus_phage	1.2e-24	30.5
WP_171475788.1\|9679108_9681424_-	PAS domain S-box protein	NA	NA	NA	NA
WP_171475789.1\|9681560_9682136_-	CIA30 family protein	NA	NA	NA	NA
WP_171475790.1\|9682132_9682537_-	tryptophan-rich sensory protein	NA	NA	NA	NA
WP_171475791.1\|9682540_9682792_-	hypothetical protein	NA	NA	NA	NA
WP_171475792.1\|9682852_9685183_-	PAS domain S-box protein	NA	NA	NA	NA
WP_171475793.1\|9686221_9686872_+	hypothetical protein	NA	NA	NA	NA
WP_171475794.1\|9687439_9688555_-\|transposase	ISAs1 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP053452

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CRISPR-Cas detection and classification

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