CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP050389	Acinetobacter baumannii strain VB473 plasmid pVB473_1, complete sequence	0 crisprs	NA	0	0	0	0
NZ_CP050388	Acinetobacter baumannii strain VB473 chromosome, complete genome	0 crisprs	DEDDh,RT,csa3,cas3,WYL	0	0	5	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

162804 : 183775

Escherichia_phage(28.57%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001067784.1\|162804_163509_-\|transposase	IS6-like element IS1006 family transposase	A0A077SL39	Escherichia_phage	1.9e-120	85.8
WP_114318428.1\|164117_165208_-\|transposase	IS4 family transposase ISAba1	NA	NA	NA	NA
WP_001082319.1\|165309_166113_+	aminoglycoside O-phosphotransferase APH(3'')-Ib	Q75ZG1	Hepacivirus	4.9e-24	34.3
WP_000480968.1\|166112_166949_+	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	NA	NA
WP_095706034.1\|167090_167531_+	hypothetical protein	NA	NA	NA	NA
WP_001057867.1\|167850_168261_+	hypothetical protein	NA	NA	NA	NA
WP_001988464.1\|168708_169734_+\|transposase	IS30-like element ISAba125 family transposase	A0A2K9V2S9	Faecalibacterium_phage	5.7e-25	30.1
WP_004201164.1\|169834_170647_+	subclass B1 metallo-beta-lactamase NDM-1	NA	NA	NA	NA
WP_004201167.1\|170650_171016_+	bleomycin binding protein Ble-MBL	NA	NA	NA	NA
WP_004201168.1\|171020_171659_+	phosphoribosylanthranilate isomerase	NA	NA	NA	NA
WP_004201169.1\|171669_172701_-	twin-arginine translocation (TAT) pathway signal sequence domain protein	NA	NA	NA	NA
WP_004201171.1\|172705_173035_-	divalent-cation tolerance protein CutA	NA	NA	NA	NA
WP_004201172.1\|173228_173519_+	co-chaperone GroES	A0A221S322	uncultured_virus	2.1e-17	47.8
WP_004201176.1\|173574_175215_+	chaperonin GroEL	A0A219YK78	uncultured_virus	8.2e-175	62.1
WP_015056392.1\|175403_176933_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_015056391.1\|177143_177428_-	hypothetical protein	NA	NA	NA	NA
WP_001988464.1\|177720_178746_+\|transposase	IS30-like element ISAba125 family transposase	A0A2K9V2S9	Faecalibacterium_phage	5.7e-25	30.1
WP_095705933.1\|179579_182498_+	AAA family ATPase	NA	NA	NA	NA
WP_000030933.1\|182548_182986_+	hypothetical protein	NA	NA	NA	NA
WP_001067784.1\|183070_183775_-\|transposase	IS6-like element IS1006 family transposase	A0A077SL39	Escherichia_phage	1.9e-120	85.8

DBSCAN-SWA_2

1031456 : 1047418

Acinetobacter_phage(42.86%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000119264.1\|1031456_1031627_-	hypothetical protein	A0A2H4JBW6	uncultured_Caudovirales_phage	2.4e-13	69.2
WP_001292077.1\|1031627_1031843_-	hypothetical protein	I2GUB6	Acinetobacter_phage	8.5e-32	92.9
WP_000028957.1\|1031839_1032049_-	hypothetical protein	A0A0P0IRG7	Acinetobacter_phage	6.3e-32	94.2
WP_000578497.1\|1032045_1032555_-	phage protein	A0A0P0I8H3	Acinetobacter_phage	1.6e-33	87.8
WP_000609004.1\|1032551_1033088_-	hypothetical protein	NA	NA	NA	NA
WP_000464381.1\|1033080_1033260_-	hypothetical protein	NA	NA	NA	NA
WP_000986115.1\|1033260_1033551_-	hypothetical protein	NA	NA	NA	NA
WP_000805214.1\|1033691_1034720_-	ead/Ea22-like family protein	A0A2I7QY11	Vibrio_phage	1.3e-13	29.0
WP_000644001.1\|1034732_1035413_-	3'-5' exonuclease	NA	NA	NA	NA
WP_001260063.1\|1035583_1035955_-	hypothetical protein	A0A0D4DCB5	Acinetobacter_phage	2.2e-11	38.8
WP_001072362.1\|1035951_1036281_-	hypothetical protein	NA	NA	NA	NA
WP_000350172.1\|1036339_1036600_-	hypothetical protein	NA	NA	NA	NA
WP_001290758.1\|1036684_1037488_-	DUF2303 family protein	A0A2R2Z323	Escherichia_phage	1.1e-26	33.3
WP_000105905.1\|1037527_1037860_-	hypothetical protein	NA	NA	NA	NA
WP_000922095.1\|1038075_1038351_-	hypothetical protein	NA	NA	NA	NA
WP_000550612.1\|1038362_1039052_-	helix-turn-helix domain-containing protein	A0A0R6PCY1	Moraxella_phage	5.0e-25	37.1
WP_000335919.1\|1039178_1039412_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_000818521.1\|1039444_1039819_+	hypothetical protein	NA	NA	NA	NA
WP_000290738.1\|1039852_1040053_+	hypothetical protein	NA	NA	NA	NA
WP_000200037.1\|1040049_1040235_+	hypothetical protein	NA	NA	NA	NA
WP_000575725.1\|1040231_1040687_+	hypothetical protein	NA	NA	NA	NA
WP_000218432.1\|1040683_1041331_+	hypothetical protein	R9VWB9	Serratia_phage	2.0e-31	38.6
WP_000606801.1\|1041327_1042302_+	phosphoadenosine phosphosulfate reductase family protein	A4JX51	Burkholderia_virus	8.8e-76	48.5
WP_002029044.1\|1042307_1042694_+	hypothetical protein	NA	NA	NA	NA
WP_001055562.1\|1042690_1044169_+	DNA cytosine methyltransferase	A0A1I9KFD6	Aeromonas_phage	9.7e-135	53.3
WP_000124473.1\|1044172_1045216_+	hypothetical protein	A0A2H4J580	uncultured_Caudovirales_phage	4.3e-28	52.8
WP_000994866.1\|1045212_1045977_+	ATP-binding protein	A0A0D4DBZ2	Acinetobacter_phage	6.7e-63	48.8
WP_000990949.1\|1045973_1046507_+	hypothetical protein	NA	NA	NA	NA
WP_001136753.1\|1046962_1047418_+	hypothetical protein	A0A0P0HSF5	Acinetobacter_phage	2.2e-53	68.9

DBSCAN-SWA_3

1282043 : 1294391

Acinetobacter_phage(95.65%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000004579.1\|1282043_1282766_-	hypothetical protein	A0A0P0HSE1	Acinetobacter_phage	1.7e-55	88.2
WP_000147323.1\|1282762_1283170_-	hypothetical protein	A0A0P0IRG7	Acinetobacter_phage	7.5e-13	52.2
WP_000654846.1\|1283170_1283422_-	hypothetical protein	A0A0P0IVN4	Acinetobacter_phage	6.4e-39	100.0
WP_000698529.1\|1283423_1284356_-	hypothetical protein	A0A0P0I438	Acinetobacter_phage	2.2e-137	80.0
WP_001207474.1\|1284352_1285474_-	ATP-binding protein	A0A0N7IRE0	Acinetobacter_phage	2.8e-211	99.5
WP_000064463.1\|1285485_1285809_-	hypothetical protein	A0A0D4DCB5	Acinetobacter_phage	4.8e-55	95.3
WP_000656405.1\|1285801_1286092_-	hypothetical protein	A0A0P0IDU2	Acinetobacter_phage	5.1e-48	95.8
WP_001101038.1\|1286091_1286535_-	hypothetical protein	A0A0N7IRF7	Acinetobacter_phage	1.7e-71	94.5
WP_000051960.1\|1286728_1286971_+	hypothetical protein	A0A0P0I4B0	Acinetobacter_phage	5.2e-38	100.0
WP_000845537.1\|1286977_1287181_-	hypothetical protein	A0A0P0IKZ8	Acinetobacter_phage	1.2e-27	100.0
WP_001129676.1\|1287319_1287823_-	hypothetical protein	A0A0P0I896	Acinetobacter_phage	1.1e-77	100.0
WP_000048052.1\|1287824_1288832_-	hypothetical protein	A0A0P0IY33	Acinetobacter_phage	2.9e-183	100.0
WP_000370485.1\|1288883_1289099_-	hypothetical protein	A0A0P0IKK4	Acinetobacter_phage	9.4e-31	98.6
WP_000052252.1\|1289113_1289866_-	LexA family transcriptional regulator	J7I4M9	Acinetobacter_phage	5.5e-102	74.3
WP_000703023.1\|1289970_1290159_+	hypothetical protein	NA	NA	NA	NA
WP_000048916.1\|1290169_1290490_+	hypothetical protein	A0A0P0HSE9	Acinetobacter_phage	1.2e-42	87.7
WP_001180660.1\|1290551_1290824_+	hypothetical protein	J7I0V3	Acinetobacter_phage	7.2e-36	90.0
WP_000602535.1\|1290895_1291120_+	hypothetical protein	A0A0P0I444	Acinetobacter_phage	3.2e-34	97.3
WP_000064627.1\|1291112_1291994_+	replication protein	A0A0P0IKQ2	Acinetobacter_phage	3.3e-138	95.2
WP_001003671.1\|1291996_1292797_+	hypothetical protein	A0A0P0IDV1	Acinetobacter_phage	2.8e-144	95.5
WP_000647826.1\|1292793_1293132_+	hypothetical protein	A0A0P0IKW4	Acinetobacter_phage	1.1e-30	56.3
WP_000462878.1\|1293124_1293517_+	hypothetical protein	J7HXM5	Acinetobacter_phage	1.2e-07	57.8
WP_000100162.1\|1293516_1293918_+	DUF559 domain-containing protein	A0A0P0I8E8	Acinetobacter_phage	2.6e-66	96.2
WP_001277128.1\|1293914_1294391_+	hypothetical protein	A0A2H4J548	uncultured_Caudovirales_phage	1.2e-25	40.3

DBSCAN-SWA_4

1298349 : 1327023

Acinetobacter_phage(93.55%)

terminase,capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001136773.1\|1298349_1298805_+	hypothetical protein	A0A0P0HSF5	Acinetobacter_phage	2.7e-80	95.4
WP_000378523.1\|1298865_1299300_+	hypothetical protein	A0A0P0IVP9	Acinetobacter_phage	7.4e-67	84.7
WP_000435230.1\|1299268_1299910_+	hypothetical protein	A0A0D4DBV4	Acinetobacter_phage	6.3e-115	88.7
WP_000729387.1\|1299968_1300484_+	DUF2280 domain-containing protein	A0A1B1P9C2	Acinetobacter_phage	3.2e-45	61.3
WP_001132930.1\|1300443_1301736_+\|terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	6.4e-215	86.0
WP_000301495.1\|1301775_1303116_+	DUF4055 domain-containing protein	A0A0P0IDW1	Acinetobacter_phage	3.4e-235	92.2
WP_000146970.1\|1303125_1304232_+\|capsid	minor capsid protein	A0A0P0IR98	Acinetobacter_phage	2.1e-190	90.2
WP_000004550.1\|1304228_1304459_+	hypothetical protein	NA	NA	NA	NA
WP_001291451.1\|1304474_1304627_+	hypothetical protein	NA	NA	NA	NA
WP_000589038.1\|1304678_1304993_+	hypothetical protein	A0A0S3UFT8	Pseudomonas_phage	5.2e-14	50.5
WP_000056390.1\|1305079_1305871_+	hypothetical protein	A0A0P0J090	Acinetobacter_phage	2.3e-90	74.2
WP_000852265.1\|1305884_1306835_+	hypothetical protein	A0A0P0HSG2	Acinetobacter_phage	3.7e-172	94.9
WP_000524488.1\|1306879_1307215_+	hypothetical protein	A0A0N7IRE4	Acinetobacter_phage	2.7e-53	100.0
WP_000008459.1\|1307218_1307599_+	hypothetical protein	A0A0P0IVQ3	Acinetobacter_phage	6.9e-53	84.9
WP_000524257.1\|1307599_1307968_+	hypothetical protein	J7I467	Acinetobacter_phage	8.7e-61	92.6
WP_000540685.1\|1308036_1308234_+	hypothetical protein	NA	NA	NA	NA
WP_000235282.1\|1308241_1308535_+	hypothetical protein	NA	NA	NA	NA
WP_000248411.1\|1308586_1308997_+	hypothetical protein	A0A0P0IKR8	Acinetobacter_phage	7.7e-50	73.3
WP_000539749.1\|1308968_1309337_+	hypothetical protein	A0A0D4DBN1	Acinetobacter_phage	2.0e-52	82.8
WP_001984404.1\|1309293_1309737_+	hypothetical protein	A0A0D4DBX3	Acinetobacter_phage	2.0e-75	94.6
WP_001277696.1\|1309738_1309957_+	hypothetical protein	A0A0P0I8C2	Acinetobacter_phage	1.2e-28	94.2
WP_000749909.1\|1310065_1310587_+	SH3 domain-containing protein	NA	NA	NA	NA
WP_000064593.1\|1310683_1311037_+	hypothetical protein	A0A0D4DCF7	Acinetobacter_phage	3.3e-57	96.6
WP_000002408.1\|1311036_1312215_+	hypothetical protein	A0A0D4DCQ4	Acinetobacter_phage	1.2e-103	66.3
WP_000094278.1\|1312267_1313185_+	hypothetical protein	J7HXP7	Acinetobacter_phage	2.0e-170	100.0
WP_001185585.1\|1313254_1313770_+	hypothetical protein	A0A0N7IRG3	Acinetobacter_phage	2.5e-77	96.6
WP_000335868.1\|1314272_1314572_+	DUF4258 domain-containing protein	A0A0P0IE58	Acinetobacter_phage	7.4e-50	100.0
WP_000274931.1\|1314580_1315039_+	helix-turn-helix domain-containing protein	A0A0P0IRJ4	Acinetobacter_phage	1.1e-84	100.0
WP_000721572.1\|1315143_1315824_+	hypothetical protein	A0A0R6PJY5	Moraxella_phage	2.5e-53	49.3
WP_001275792.1\|1315825_1316089_+	hypothetical protein	NA	NA	NA	NA
WP_000046573.1\|1316216_1320527_+	tape measure protein	A0A0D4DC37	Acinetobacter_phage	0.0e+00	98.3
WP_000721057.1\|1320617_1321205_+	hypothetical protein	NA	NA	NA	NA
WP_000277448.1\|1321297_1321696_+	hypothetical protein	J7I0X8	Acinetobacter_phage	4.1e-72	97.7
WP_000368388.1\|1321695_1322202_+	DUF1833 family protein	J7HXQ5	Acinetobacter_phage	1.5e-90	97.0
WP_000835160.1\|1322198_1322561_+	hypothetical protein	A0A0P0J0A2	Acinetobacter_phage	8.1e-51	79.2
WP_000598554.1\|1322553_1325979_+	hypothetical protein	A0A0P0HSH9	Acinetobacter_phage	0.0e+00	94.2
WP_000433907.1\|1326046_1326436_+	hypothetical protein	A0A0P0I8L9	Acinetobacter_phage	3.3e-66	99.2
WP_001019739.1\|1326477_1327023_+	N-acetylmuramidase	A0A0B5L5G7	Acinetobacter_phage	4.7e-103	100.0

DBSCAN-SWA_5

2762843 : 2777640

Acinetobacter_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000566784.1\|2762843_2763419_+	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	3.2e-110	100.0
WP_000960548.1\|2763514_2766214_-	M1 family metallopeptidase	A0A0P0IY26	Acinetobacter_phage	0.0e+00	100.0
WP_000281127.1\|2766293_2769026_-	TonB-dependent receptor	A0A0P0I887	Acinetobacter_phage	0.0e+00	99.9
WP_001982145.1\|2769381_2770431_+	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	9.8e-190	100.0
WP_000608304.1\|2770440_2771247_+	indole-3-glycerol phosphate synthase TrpC	A0A0P0IR83	Acinetobacter_phage	7.9e-147	100.0
WP_000066126.1\|2771256_2771952_+	Smr/MutS family protein	A0A0P0IDT4	Acinetobacter_phage	5.8e-122	100.0
WP_001164226.1\|2771962_2772946_-	xanthine dehydrogenase accessory protein XdhC	A0A0P0IKN7	Acinetobacter_phage	2.0e-189	100.0
WP_001076817.1\|2772952_2775328_-	xanthine dehydrogenase molybdopterin binding subunit	A0A0P0I429	Acinetobacter_phage	0.0e+00	100.0
WP_000893683.1\|2775329_2776829_-	xanthine dehydrogenase small subunit	A0A0P0IVM8	Acinetobacter_phage	6.1e-286	100.0
WP_001187844.1\|2777091_2777640_+	GTP cyclohydrolase I FolE	A0A0P0HSD2	Acinetobacter_phage	1.7e-97	100.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage