CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP051750	Escherichia coli strain SCU-486 plasmid pSCU-486-1, complete sequence	0 crisprs	DEDDh	0	0	1	0
NZ_CP051749	Escherichia coli strain SCU-486 chromosome, complete genome	5 crisprs	cas3,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,RT,WYL,PD-DExK,cas14j,DEDDh,DinG	0	23	8	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1262 : 58099

Escherichia_phage(23.53%)

tRNA,transposase,integrase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001066954.1\|1262_2003_-\|integrase	tyrosine-type recombinase/integrase	I3WFA4	Macacine_betaherpesvirus	1.2e-24	57.6
WP_032141192.1\|2123_2312_-	hypothetical protein	NA	NA	NA	NA
WP_001072358.1\|2679_3849_+	hypothetical protein	NA	NA	NA	NA
WP_001322642.1\|4695_4968_-	transcriptional regulator	NA	NA	NA	NA
WP_001067855.1\|5934_6639_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_001067855.1\|8094_8799_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000911324.1\|10023_10422_-\|tRNA	tRNA(fMet)-specific endonuclease VapC	NA	NA	NA	NA
WP_000450532.1\|10421_10649_-	toxin-antitoxin system antitoxin VapB	NA	NA	NA	NA
WP_011117356.1\|10730_16001_+	conjugative transfer relaxase/helicase TraI	NA	NA	NA	NA
WP_000205777.1\|16020_16767_+	conjugal transfer pilus acetylase TraX	A0A077JBM8	Xanthomonas_phage	6.0e-08	30.2
WP_000139359.1\|16821_17382_+	fertility inhibition protein FinO	NA	NA	NA	NA
WP_012311405.1\|17519_17732_+	hypothetical protein	NA	NA	NA	NA
WP_001233871.1\|17974_18436_+	thermonuclease family protein	A0A0R6PHV6	Moraxella_phage	5.5e-20	37.7
WP_001333231.1\|18481_18691_+	hemolysin expression modulator Hha	NA	NA	NA	NA
WP_000083818.1\|19540_19801_+	replication regulatory protein RepA	NA	NA	NA	NA
WP_001365705.1\|20026_20101_+	RepA leader peptide Tap	NA	NA	NA	NA
WP_000130940.1\|20093_20951_+	incFII family plasmid replication initiator RepA	NA	NA	NA	NA
WP_166740453.1\|21652_21811_+	hypothetical protein	NA	NA	NA	NA
WP_012881119.1\|21865_22135_+	ABC transporter ATPase	NA	NA	NA	NA
WP_012881118.1\|22131_22413_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_012881117.1\|22458_23307_+	3'-5' exonuclease	K7RFY5	Vibrio_phage	5.0e-27	38.5
WP_001311056.1\|23423_23906_+	hypothetical protein	NA	NA	NA	NA
WP_169062429.1\|23934_25464_-\|transposase	IS5 family transposase	A0A1B0VFY5	Salmonella_phage	7.6e-82	99.3
WP_001617865.1\|25498_26374_-	class A extended-spectrum beta-lactamase CTX-M-14	A0A1B0VBP7	Salmonella_phage	6.1e-153	99.6
WP_014342101.1\|26353_26476_+	hypothetical protein	NA	NA	NA	NA
WP_000608644.1\|26623_27886_-\|transposase	IS1380-like element ISEc9 family transposase	A0A1B0VDR3	Salmonella_phage	1.3e-39	100.0
WP_025999368.1\|28229_29417_-	MFS transporter	NA	NA	NA	NA
WP_000020504.1\|29473_30235_-	ABC transporter ATP-binding protein	A0A1V0SE00	Indivirus	8.0e-16	30.7
WP_001545318.1\|30234_31272_-	iron ABC transporter permease	NA	NA	NA	NA
WP_000466682.1\|32714_33131_-	SdiA-regulated domain-containing protein	NA	NA	NA	NA
WP_106378881.1\|33342_34570_+\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	1.9e-168	94.7
WP_169062430.1\|34868_35318_-	Dr family adhesin structural subunit	NA	NA	NA	NA
WP_000243157.1\|35460_35883_-	hypothetical protein	NA	NA	NA	NA
WP_000471454.1\|38480_39233_-	fimbria/pilus periplasmic chaperone	NA	NA	NA	NA
WP_000845048.1\|44633_45647_-\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
WP_001317507.1\|45802_46276_+	trimethoprim-resistant dihydrofolate reductase DfrA5	G3MBI7	Bacillus_virus	1.0e-13	27.7
WP_000679427.1\|46459_46807_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
WP_000259031.1\|46800_47640_+	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
WP_000376616.1\|47767_47971_+	hypothetical protein	NA	NA	NA	NA
WP_000184001.1\|48126_49332_+	chromate efflux transporter	NA	NA	NA	NA
WP_000130000.1\|49342_49648_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_001389365.1\|49874_50639_+\|transposase	IS6-like element IS6100 family transposase	A0A077SL39	Escherichia_phage	4.3e-86	65.7
WP_001137892.1\|51131_51716_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_000219391.1\|52948_53854_-	Mph(A) family macrolide 2'-phosphotransferase	NA	NA	NA	NA
WP_002063889.1\|55658_56201_+	AAA family ATPase	NA	NA	NA	NA
WP_165587319.1\|56292_57448_+\|transposase	IS3 family transposase	A0A2P1JR32	Mycobacterium_phage	1.3e-17	30.6
WP_001067855.1\|57394_58099_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP051749

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP051749_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP051749_1

846183-846821

TypeI-E

I-E

Consensus_repeat	Method
CGGTTTATCCCCGCTGACGCGGGGAACAC	PILER-CR
CGGTTTATCCCCGCTGACGCGGGGAACAC	CRISPRCasFinder
CGGTTTATCCCCGCTGNCGCGGGGAACAC	CRT

10 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NZ_CP051749_1

>merge|NZ_CP051749|1|846183-846821|PILER-CR,CRISPRCasFinder,CRT
CGGTTTATCCCCGCTGACGCGGGGAACACGGCTTTAACCACACGAGCAAGTCCTTCGCTGGCGGTTTATCCCCGCTGGCGCGGGGAACACAGTTAACAACCCGCGCCGAACAAGCCCGACAACGGTTTATCCCCGCTGGCGCGGGGAACACTCGCACCGCGTTAATCCGGCAGAAAAACAACACGGTTTATCCCCGCTGGCGCGGGGAACACCCGACAATCTCCGCCTCCAGTCGGTCGACCTGCGGTTTATCCCCGCTGGCGCGGGGAACACTGTGCCCGACTGCGTGCCGCGTCGAGCGCCTGCGGTTTATCCCCGCTGGCGCGGGGAACACTTCGCCGCCATCATCCTGTGGTGCCAGTTGACCGGTTTATCCCCGCTGACGCGGGGAACACGCGCCTCGGTTGTTTAGCCATGCTCAGCCCCACGGTTTATCCCCGCTGACGCGGGGAACACCTTTCCACCCAGGCACTGATACTCCACATAAACGGTTTATCCCCGCTGACGCGGGGAACACGATCGCCGGGCGCGGTTACCCGCTGCGAAAATCGGTTTATCCCCGCTGACGCGGGGAACACCTCACGCGAGGCATCGATCGTGATCTGATTGTCGGTTTATCCCCGCTGACGCGGGGAACAC

>NZ_CP051749|1|1|846183-846821|PILER-CR
CGGTTTATCCCCGCTGACGCGGGGAACAC	GGCTTTAACCACACGAGCAAGTCCTTCGCTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGTTAACAACCCGCGCCGAACAAGCCCGACAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCGCACCGCGTTAATCCGGCAGAAAAACAACA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCGACAATCTCCGCCTCCAGTCGGTCGACCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGTGCCCGACTGCGTGCCGCGTCGAGCGCCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTCGCCGCCATCATCCTGTGGTGCCAGTTGAC
CGGTTTATCCCCGCTGACGCGGGGAACAC	GCGCCTCGGTTGTTTAGCCATGCTCAGCCCCA
CGGTTTATCCCCGCTGACGCGGGGAACAC	CTTTCCACCCAGGCACTGATACTCCACATAAA
CGGTTTATCCCCGCTGACGCGGGGAACAC	GATCGCCGGGCGCGGTTACCCGCTGCGAAAAT
CGGTTTATCCCCGCTGACGCGGGGAACAC	CTCACGCGAGGCATCGATCGTGATCTGATTGT
CGGTTTATCCCCGCTGACGCGGGGAACAC

>NZ_CP051749|1|1|846183-846821|CRISPRCasFinder
CGGTTTATCCCCGCTGACGCGGGGAACAC	GGCTTTAACCACACGAGCAAGTCCTTCGCTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGTTAACAACCCGCGCCGAACAAGCCCGACAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCGCACCGCGTTAATCCGGCAGAAAAACAACA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCGACAATCTCCGCCTCCAGTCGGTCGACCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGTGCCCGACTGCGTGCCGCGTCGAGCGCCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTCGCCGCCATCATCCTGTGGTGCCAGTTGAC
CGGTTTATCCCCGCTGACGCGGGGAACAC	GCGCCTCGGTTGTTTAGCCATGCTCAGCCCCA
CGGTTTATCCCCGCTGACGCGGGGAACAC	CTTTCCACCCAGGCACTGATACTCCACATAAA
CGGTTTATCCCCGCTGACGCGGGGAACAC	GATCGCCGGGCGCGGTTACCCGCTGCGAAAAT
CGGTTTATCCCCGCTGACGCGGGGAACAC	CTCACGCGAGGCATCGATCGTGATCTGATTGT
CGGTTTATCCCCGCTGACGCGGGGAACAC

>NZ_CP051749|1|1|846183-846821|CRT
CGGTTTATCCCCGCTGACGCGGGGAACAC	GGCTTTAACCACACGAGCAAGTCCTTCGCTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	AGTTAACAACCCGCGCCGAACAAGCCCGACAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCGCACCGCGTTAATCCGGCAGAAAAACAACA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CCGACAATCTCCGCCTCCAGTCGGTCGACCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGTGCCCGACTGCGTGCCGCGTCGAGCGCCTG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTCGCCGCCATCATCCTGTGGTGCCAGTTGAC
CGGTTTATCCCCGCTGACGCGGGGAACAC	GCGCCTCGGTTGTTTAGCCATGCTCAGCCCCA
CGGTTTATCCCCGCTGACGCGGGGAACAC	CTTTCCACCCAGGCACTGATACTCCACATAAA
CGGTTTATCCCCGCTGACGCGGGGAACAC	GATCGCCGGGCGCGGTTACCCGCTGCGAAAAT
CGGTTTATCCCCGCTGACGCGGGGAACAC	CTCACGCGAGGCATCGATCGTGATCTGATTGT
CGGTTTATCCCCGCTGACGCGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP051749.1\|WP_001219242.1\|839783_840263_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
NZ_CP051749.1\|WP_001551550.1\|842474_843902_-\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP051749.1\|WP_000029331.1\|850586_851123_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP051749.1\|WP_000956458.1\|855673_855826_-\|type-I-toxin-antitoxin-system-Hok-family-toxin	unknown	unknown	gnl\|CDD\|366840
NZ_CP051749.1\|WP_000568924.1\|838737_839787_-\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NZ_CP051749.1\|WP_001551555.1\|852779_855479_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP051749.1\|WP_001551553.1\|848759_849506_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NZ_CP051749.1\|WP_000246131.1\|840262_840973_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NZ_CP051749.1\|WP_000144858.1\|847207_848131_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP051749.1\|WP_001551551.1\|845063_846101_+\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NZ_CP051749.1\|WP_000063172.1\|846917_847211_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_CP051749.1\|WP_000206445.1\|849516_850572_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	cd09646_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP051749.1\|WP_001295182.1\|837995_838757_-\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NZ_CP051749.1\|WP_000281438.1\|848127_848778_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
NZ_CP051749.1\|WP_001551549.1\|841496_841820_-\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
NZ_CP051749.1\|WP_000517476.1\|840991_841303_-\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
NZ_CP051749.1\|WP_001173673.1\|841869_842475_-\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NZ_CP051749.1\|WP_001551554.1\|851119_852682_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_CP051749.1\|WP_000372108.1\|843903_844812_-\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP051749.1\|WP_001521160.1\|856090_856825_-\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997

Protein	Function_ID	Function_description	E-value
NZ_CP051749.1\|WP_001219242.1\|839783_840263_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.56248e-104
NZ_CP051749.1\|WP_001551550.1\|842474_843902_-\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP051749.1\|WP_000029331.1\|850586_851123_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	4.72866e-28
NZ_CP051749.1\|WP_000956458.1\|855673_855826_-\|type-I-toxin-antitoxin-system-Hok-family-toxin	gnl\|CDD\|366840	pfam01848, HOK_GEF, Hok/gef family.	8.32243e-12
NZ_CP051749.1\|WP_000568924.1\|838737_839787_-\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NZ_CP051749.1\|WP_001551555.1\|852779_855479_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	0
NZ_CP051749.1\|WP_001551553.1\|848759_849506_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	5.14306e-47
NZ_CP051749.1\|WP_000246131.1\|840262_840973_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	4.32778e-121
NZ_CP051749.1\|WP_000144858.1\|847207_848131_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	1.11358e-157
NZ_CP051749.1\|WP_001551551.1\|845063_846101_+\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NZ_CP051749.1\|WP_000063172.1\|846917_847211_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	2.07297e-64
NZ_CP051749.1\|WP_000206445.1\|849516_850572_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	2.45802e-155
NZ_CP051749.1\|WP_001295182.1\|837995_838757_-\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.92279e-150
NZ_CP051749.1\|WP_000281438.1\|848127_848778_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	3.43159e-91
NZ_CP051749.1\|WP_001551549.1\|841496_841820_-\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	1.41878e-52
NZ_CP051749.1\|WP_000517476.1\|840991_841303_-\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	5.55235e-62
NZ_CP051749.1\|WP_001173673.1\|841869_842475_-\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	7.34447e-148
NZ_CP051749.1\|WP_001551554.1\|851119_852682_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
NZ_CP051749.1\|WP_000372108.1\|843903_844812_-\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP051749.1\|WP_001521160.1\|856090_856825_-\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	4.91666e-137

>NZ_CP051749.1|WP_001551551.1|845063_846101_+|alkaline-phosphatase-isozyme-conversion-aminopeptidase
MFSALRHRTAALALGVCFILPVHASSPKPGDFANTQARHIATFFPGRMTGTPAEMLSADYIRQQFQQMGYRSDIRTFNSRYIYTARDNRKSWHNVTGSTVIAAHEGKAPQQIIIMAHLDTYAPLSDADADANLGGLTLQGMDDNAAGLGVMLELAERLKNTPTEYGIRFVATSGEEEGKLGAENLLKRMSDTEKKNTLLVINLDNLIVGDKLYFNSGVKTPEAVRKLTRDRALAIARSHGIAATTNPGLNKNYPKGTGCCNDAEVFDKAGIAVLSVEATNWNLGNKDGYQQRAKTAAFPAGTSWHDVRLDNQQHIDKALPGRIERRCRDVIRIMLPLVKELAKAS
>NZ_CP051749.1|WP_000372108.1|843903_844812_-|sulfate-adenylyltransferase-subunit-CysD
MDQIRLTHLRQLEAESIHIIREVAAEFSNPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYEFRDRTAKAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWHNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMIDDNRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESNAQTLPEIIEEMLVSTTSERQGRVIDRDQAGSMELKKRQGYF
>NZ_CP051749.1|WP_001551550.1|842474_843902_-|sulfate-adenylyltransferase-subunit-CysN
MNTALAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVGYSEETFTRIREDYLTFAGQLPGNLDIRFVPLSALEGDNVASQSESMPWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEVGQRVKVLPSGVESNVARIVTFDGDREEAFAGEAITLVLTDEIDISRGDLLLAADESLPAVQSASVDVVWMAEQPLSPGQRYDIKIAGKKTRARVDGIRYQVDINNLTQREVENLPLNGIGLVDLTFDEPLVLDRYQQNPVTGGLIFIDRLSNVTVGAGMVHEPVSQATTAPSEFSAFELELNALVRRHFPHWGARDLLGDK
>NZ_CP051749.1|WP_001173673.1|841869_842475_-|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVQQRELHHGHRGVVLWFTGLSGSGKSTVAGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYEAPESAEIHLNGEQLVTNLVQQLLDLLRQNDIIRS
>NZ_CP051749.1|WP_001551549.1|841496_841820_-|DUF3561-family-protein
MRNSHNITLTNNDSLTEDEETTWSLPGAVIGFISWLFALAMPMLIYGSNTLFFFIYTWPFFLALMPVAVVVGIALHSLMDGKLRYSIVFTLVTVGIMFGALFMWLLG
>NZ_CP051749.1|WP_000517476.1|840991_841303_-|cell-division-protein-FtsB
MGKLTLLLLAILVWLQYSLWFGKNGIHDYTRVNDDVAAQQATNAKLKARNDQLFAEIDDLNGGQEALEERARNELSMTRPGETFYRLVPDASKRAQSAGQNNR
>NZ_CP051749.1|WP_000246131.1|840262_840973_-|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKHVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTRTIHQENT
>NZ_CP051749.1|WP_001219242.1|839783_840263_-|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK
>NZ_CP051749.1|WP_000568924.1|838737_839787_-|tRNA-pseudouridine(13)-synthase-TruD
MIEFDNLTYLHGKPQGTGLLKANPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDLSAFQLEGCQVLEYARHKRKLRLGALKGNAFTLVLREVSNRDDVEQRLIDICVKGVPNYFGAQRFGIGGSNLQGALRWAQTNTPVRDRNKRSFWLSAARSALFNQIVAERLKKADVNQVVDGDALQLAGRGSWFVATTEELAELQRRVNDKELMITAALPGSGEWGTQREALAFEQAAVAAETELQALLVREKVEAARRAMLLYPQQLSWNWWDDVTVEIRFWLPAGSFATSVVRELINTTGDYAHIAE
>NZ_CP051749.1|WP_001295182.1|837995_838757_-|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFENGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINVPDLPLDQIKGIRVTRCGTRHPADQVIPQQDPRGNTLYWIGPPGGKCDAGPGTDFAAVDEGYVSITPLHVDLTAHSAQDVVSDWLNSVGVGTQW
>NZ_CP051749.1|WP_000063172.1|846917_847211_-|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMVVVVTENVPPRLRGRLAIWLLEVRAGVYVGDTSKRIREMIWQQISQLAGCGNVVMAWATNTESGFEFQTWGENRRIPVDLDGVRLVSFLPVDNQ
>NZ_CP051749.1|WP_000144858.1|847207_848131_-|type-I-E-CRISPR-associated-endonuclease-Cas1
MTFVPLSPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVHLAATVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALTEDLRLKVVRKMYELRFREPPPARRSVEQLRGIEGSRVRQTYALLAKQYGVKWNGRKYDPKDWEKGDVVNRCISAATSCLYGISEAAVLAAGYAPAIGFIHSGKPLSFVYDIADIIKFDSVVPKAFEIAARQPAEPDKEVRLACRDIFRSSKLTGKLIPLIEEVLAAGEIEPPQPAPDMLPPAIPEPETLGDSGHRGRGG
>NZ_CP051749.1|WP_000281438.1|848127_848778_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRITLHTGQLSPAQLLHLVDRGEYVMHQWLWDLFPGGKERQFLYRREELQGAFRFFVLSQERPAESDIFTIECRPFAPELRTGQSLCFNLRANPTICKAGKRHDLLMEAKRQVRGQVEGSDVWLHQQQAALDWLAAQGERSGFTLLDTSVDAYRQQQLRRENSRQLIQFSSVDYTGMLTVTDPGLFLQRLSQGYGKSRAFGCGLMLIKPGAEA
>NZ_CP051749.1|WP_001551553.1|848759_849506_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSQYLIFQLHGPMASWGVDAPGEVRHTHELPSRSALLGLLAAGVGIRRDDTERLNAFNSHYSLVVCASRNPRWARDYHTVQMPKEVRKARYFSRREELSAPDLLSAIISRRDYYTDAWWMVAVATTPDAPYRLEQLQDGLRHPVFPLYLGRKSHPLALPLAPLLLEGNASDVLRNAYQQYQDSFRELKVSLPKLQDECWWEGEHDGLVASKILRRRDVPLNRQQWLFGERTINQGPWLSKEEPCTSQE
>NZ_CP051749.1|WP_000206445.1|849516_850572_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRVSSQSLKRAWRTSALFEQALAGHIGIRSGRIAREAATILIEKGIEEKKAIEWAAKIADYLGKAKNDKKPKDPLTNAETEQLVHISPAEFDAVKALAHQLAEEKRAPKEEDLALLRKDRMAVDIAMFGRMLANKPEFNVEAACQVAHAFGVSETIVEDDFFTAVDDLRQASEDAGAGHLGETGFGSALFYTYICIDKDLLVENLGGDEALANQTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTEQPRSLAAAFYEPINGTRQLDVAVQRITTLRENMNTVYEQKTECASFDVMNKQGSMKDVLDFICA
>NZ_CP051749.1|WP_000029331.1|850586_851123_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSIVKEEHKATLRKWHEELQEKRGNRASLRRSTTVNDVCLSEGFRSLLMQTHTLWKIEAQEWRFTALALVAAVSANVKAIDERQPFAAQLAAVMSEGRFTRLSAVKTPDDLLRQLRRAVKLLNGSVNLISLAEDIFRWCQESDDLLNHHRRQQRPTEFIRIRWALEYYQAGDADNEQN
>NZ_CP051749.1|WP_001551554.1|851119_852682_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MNSFSLLTTPWLPVRYKDGTTGKLAPVDLADENVVDIAAPRADLQGAAWQFLLGLLQTSFAPKDQRRWDDIWEDGLEAEKLREALLSLDHAFQFGPDSPSFMQDFEALTGDKVPVASLLPEIPGVQTTKFNKDHFIKRGVTEHLCPQCSALALFSLQLNAPSGGKGYRTGLRGGGPMTTLIELQEYQGNQQTPLWRKLWLNVMPQDEADLPLPKKFDDLIFPWLGPTRTSELAGAVVTHDQVNKLQAYWGMPRRIRIDFNTTTVGNCDICDEQNDALLSLMTTKNYGANYAMWQHPLTPYRVPLKEGGEFYSVKPQPGGLIWRDWLGLIETGKSENNTELPALVVKLFNASSLKQAKVGLWGFGYDFDNMKARCWYEHHFPLLLNKKEGQIPKLRLAAQTASRILSLLRSALKEAWFSDPKGARGDFSFVDIDFWNKTQHRFLRLVRQIEEGQDADELLGKWQKEIWLFARQDFDERVFTNPYEPVDLKRVMTARKKYFTTSAEKQSAKAAREKKQEAAE
>NZ_CP051749.1|WP_001551555.1|852779_855479_-|CRISPR-associated-helicase/endonuclease-Cas3
MRKYPLSLLKDKNIVTFFDFWGKTRRGEKDGGDDYHLLCWHSLDVAAMGYLMVKSNCFGLTDYFRQLGFADTEQAAQFFAWLLCWHDTGKFARSFQQLYLHPQLKVPEGARKNYEKISHSTLGYWLWHHYLSEYEELLPSSSLSPRKLKRVMEMWMPMTTGHHGRPPDRIDELDNFLPEDKAAARDFLLEIKVLFPLIEIPAFWDDDEGIELLKQLSWYISATVVLADWTGSSTRFFPRVAQAMDIKDYWQKALVQAQNALTVFPPKAQTAPFTGINTLFPFIEHPTPLQQKVLDLDISQPGPQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLFFGLPTMATANAMYDRLVKTWLAFYSPESRPSLVLAHSARTLMDRFNESLWSGDLVGSEEPDEQAFSQGCAAWFADSNKKALLAEIGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAYMSCILEGLIERQARGGNSVILLSATLSQQQRDKLVAAFARGAEGQQEAPFLEKDDYPWLTHVTKSDVHSHRVATRKDVERSVSVGWLHSEQECIARIESAVSQGKCIAWIRNSVDDAIKVYRQLLARGVIPASSLSLFHSRFAFSDRQRIETETLARFGKSCSLQRSSQVIVCTQVIEQSVDIDLDEMISDLAPVDLLIQRAGRLQRHIRDINGQLKRDGKDERSPPELLILAPVWDDAPGDEWFGSAMRNSAYVYPDHGRIWLTQRVLREQGAIQMPHAARLLIESVYGEDVVMPEGFARSEQEQVGKYYCDRAMAKKFVLNFRPGYAANINDYLPEKLSTRLAEESVSLWLSTCIAGVVKPYANGAHAWEMSVVRVRRSWWKKHRDEFSLLEGDAFRQWCIEQRQEPEMANVILVTDDESCGYSAMEGLTGKVG
>NZ_CP051749.1|WP_000956458.1|855673_855826_-|type-I-toxin-antitoxin-system-Hok-family-toxin
MLTKYALVAIIVLCCTVLGFTLMVGDSLCELSIRERGMEFKAVLAYESKK
>NZ_CP051749.1|WP_001521160.1|856090_856825_-|phosphoadenosine-phosphosulfate-reductase
MSKLDLNALNELPKVDRILALAETNAELEKLDAEGRVAWALDNLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYRFIDELTDKLKLNLKVYRATESAAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQSGSRTNLPVLAIQRGVFKVLPIIDWDNRTIYQYLQKHGLKYHPLWDEGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG

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Crispr_ID: NZ_CP051749_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP051749_2

873964-874846

Orphan

I-E

Consensus_repeat	Method
CGGTTTATCCCCGCTGGCGCGGGGAACTC	CRISPRCasFinder
CGGTTTATCCCCGCTGGCGCGGGGAACTC	CRT
CGGTTTATCCCCGCTGGCGCGGGGAACTC	PILER-CR

14 spacers

The CRISPR arrays of NZ_CP051749_2

>merge|NZ_CP051749|2|873964-874846|CRISPRCasFinder,CRT,PILER-CR
TGGTTTATTCCCGCTGGTGCGGGGAACTCATCAGTGATATCCAACATTGCGGAGCTAAACGCGGTTTATCCCCGCTGGCGCGGGGAACTCACGAACGCGGCACACCAGGGCGTCTCATCGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCGGCACATGCCTGATCATATGTGTAGCAACGGTCGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGTACCATTACATCAAAGAGTGCAGAATCCCGGTTTATCCCCGCTGGCGCGGGGAACTCGGTGCTGTCTTTACCGTACATTGCGCGAATCTCGGTTTATCCCCGCTGGCGCGGGGAACTCATATCCTTATTGGAATACATGAGCTGCGCCCACGGTTTATCCCCGCTGGCGCGGGGAACTCCGCGACACGCTGGCAGAGCAGCTATCCCACCACGGTTTATCCCCGCTGGCGCGGGGAACTCTTTTTCCAGCTCCAGCATTGCTGTTGTATTGACGGTTTATCCCCGCTGGCGCGGGGAACTCTTAATCAGGTCGTCGTACTCAGCGCCGCTGGCCGGTTTATCCCCGCTGGCGCGGGGAACTCAGCACGGCAGGCCATATGAAATACCTGTTGCTCGGTTTATCCCCGCTGGCGCGGGGAACTCTAATATCCCTGGCGATAATCAACCGGCTTACTCGGTTTATCCCCGCTGGCGCGGGGAACTCGAGAGCGAGGGGAGATTCCGGCAGGGCGTGCACGGTTTATCCCCGCTGGCGCGGGGAACTCAAAACCGATATTTACCAGGTTGTTACTGATAGCGGTTTATCCCCGCTGGCGCGGGGAACTCTGATGTTCAAGTGTGTATGCACACTCAGCAAACGGTTTATCCCCGCTGGCGCGGGGAACTC

>NZ_CP051749|2|2|873964-874846|CRISPRCasFinder
TGGTTTATTCCCGCTGGTGCGGGGAACTC	ATCAGTGATATCCAACATTGCGGAGCTAAACG
CGGTTTATCCCCGCTGGCGCGGGGAACTC	ACGAACGCGGCACACCAGGGCGTCTCATCGTC
CGGTTTATCCCCGCTGGCGCGGGGAACTC	GGCACATGCCTGATCATATGTGTAGCAACGGT
CGGTTTATCCCCGCTGGCGCGGGGAACTC	GCAGTACCATTACATCAAAGAGTGCAGAATCC
CGGTTTATCCCCGCTGGCGCGGGGAACTC	GGTGCTGTCTTTACCGTACATTGCGCGAATCT
CGGTTTATCCCCGCTGGCGCGGGGAACTC	ATATCCTTATTGGAATACATGAGCTGCGCCCA
CGGTTTATCCCCGCTGGCGCGGGGAACTC	CGCGACACGCTGGCAGAGCAGCTATCCCACCA
CGGTTTATCCCCGCTGGCGCGGGGAACTC	TTTTTCCAGCTCCAGCATTGCTGTTGTATTGA
CGGTTTATCCCCGCTGGCGCGGGGAACTC	TTAATCAGGTCGTCGTACTCAGCGCCGCTGGC
CGGTTTATCCCCGCTGGCGCGGGGAACTC	AGCACGGCAGGCCATATGAAATACCTGTTGCT
CGGTTTATCCCCGCTGGCGCGGGGAACTC	TAATATCCCTGGCGATAATCAACCGGCTTACT
CGGTTTATCCCCGCTGGCGCGGGGAACTC	GAGAGCGAGGGGAGATTCCGGCAGGGCGTGCA
CGGTTTATCCCCGCTGGCGCGGGGAACTC	AAAACCGATATTTACCAGGTTGTTACTGATAG
CGGTTTATCCCCGCTGGCGCGGGGAACTC	TGATGTTCAAGTGTGTATGCACACTCAGCAAA
CGGTTTATCCCCGCTGGCGCGGGGAACTC

>NZ_CP051749|2|2|873964-874846|CRT
TGGTTTATTCCCGCTGGTGCGGGGAACTC	ATCAGTGATATCCAACATTGCGGAGCTAAACG
CGGTTTATCCCCGCTGGCGCGGGGAACTC	ACGAACGCGGCACACCAGGGCGTCTCATCGTC
CGGTTTATCCCCGCTGGCGCGGGGAACTC	GGCACATGCCTGATCATATGTGTAGCAACGGT
CGGTTTATCCCCGCTGGCGCGGGGAACTC	GCAGTACCATTACATCAAAGAGTGCAGAATCC
CGGTTTATCCCCGCTGGCGCGGGGAACTC	GGTGCTGTCTTTACCGTACATTGCGCGAATCT
CGGTTTATCCCCGCTGGCGCGGGGAACTC	ATATCCTTATTGGAATACATGAGCTGCGCCCA
CGGTTTATCCCCGCTGGCGCGGGGAACTC	CGCGACACGCTGGCAGAGCAGCTATCCCACCA
CGGTTTATCCCCGCTGGCGCGGGGAACTC	TTTTTCCAGCTCCAGCATTGCTGTTGTATTGA
CGGTTTATCCCCGCTGGCGCGGGGAACTC	TTAATCAGGTCGTCGTACTCAGCGCCGCTGGC
CGGTTTATCCCCGCTGGCGCGGGGAACTC	AGCACGGCAGGCCATATGAAATACCTGTTGCT
CGGTTTATCCCCGCTGGCGCGGGGAACTC	TAATATCCCTGGCGATAATCAACCGGCTTACT
CGGTTTATCCCCGCTGGCGCGGGGAACTC	GAGAGCGAGGGGAGATTCCGGCAGGGCGTGCA
CGGTTTATCCCCGCTGGCGCGGGGAACTC	AAAACCGATATTTACCAGGTTGTTACTGATAG
CGGTTTATCCCCGCTGGCGCGGGGAACTC	TGATGTTCAAGTGTGTATGCACACTCAGCAAA
CGGTTTATCCCCGCTGGCGCGGGGAACTC

>NZ_CP051749|2|2|874025-874846|PILER-CR
CGGTTTATCCCCGCTGGCGCGGGGAACTC	ACGAACGCGGCACACCAGGGCGTCTCATCGTC
CGGTTTATCCCCGCTGGCGCGGGGAACTC	GGCACATGCCTGATCATATGTGTAGCAACGGT
CGGTTTATCCCCGCTGGCGCGGGGAACTC	GCAGTACCATTACATCAAAGAGTGCAGAATCC
CGGTTTATCCCCGCTGGCGCGGGGAACTC	GGTGCTGTCTTTACCGTACATTGCGCGAATCT
CGGTTTATCCCCGCTGGCGCGGGGAACTC	ATATCCTTATTGGAATACATGAGCTGCGCCCA
CGGTTTATCCCCGCTGGCGCGGGGAACTC	CGCGACACGCTGGCAGAGCAGCTATCCCACCA
CGGTTTATCCCCGCTGGCGCGGGGAACTC	TTTTTCCAGCTCCAGCATTGCTGTTGTATTGA
CGGTTTATCCCCGCTGGCGCGGGGAACTC	TTAATCAGGTCGTCGTACTCAGCGCCGCTGGC
CGGTTTATCCCCGCTGGCGCGGGGAACTC	AGCACGGCAGGCCATATGAAATACCTGTTGCT
CGGTTTATCCCCGCTGGCGCGGGGAACTC	TAATATCCCTGGCGATAATCAACCGGCTTACT
CGGTTTATCCCCGCTGGCGCGGGGAACTC	GAGAGCGAGGGGAGATTCCGGCAGGGCGTGCA
CGGTTTATCCCCGCTGGCGCGGGGAACTC	AAAACCGATATTTACCAGGTTGTTACTGATAG
CGGTTTATCCCCGCTGGCGCGGGGAACTC	TGATGTTCAAGTGTGTATGCACACTCAGCAAA
CGGTTTATCCCCGCTGGCGCGGGGAACTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP051749.1\|WP_001071643.1\|880330_881122_-\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NZ_CP051749.1\|WP_001551563.1\|884136_885438_-\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl\|CDD\|237291
NZ_CP051749.1\|WP_000147654.1\|866479_867889_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340929
NZ_CP051749.1\|WP_000036723.1\|877079_878378_-\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_CP051749.1\|WP_000059301.1\|867910_869365_-\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223354
NZ_CP051749.1\|WP_106106683.1\|863417_864766_+\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP051749.1\|WP_000186450.1\|885494_888251_+\|two-component-sensor-histidine-kinase-BarA	unknown	unknown	gnl\|CDD\|236848
NZ_CP051749.1\|WP_000254738.1\|881193_881529_-\|endoribonuclease-MazF	unknown	unknown	gnl\|CDD\|182138
NZ_CP051749.1\|WP_001521167.1\|865722_866502_-\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	unknown	unknown	gnl\|CDD\|224997
NZ_CP051749.1\|WP_162854589.1\|864865_865759_-\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	unknown	unknown	gnl\|CDD\|224936
NZ_CP051749.1\|WP_001551561.1\|876147_877020_+\|YgcG-family-protein	unknown	unknown	gnl\|CDD\|224429
NZ_CP051749.1\|WP_000109536.1\|862430_862691_+\|ferredoxin-family-protein	unknown	unknown	gnl\|CDD\|225289
NZ_CP051749.1\|WP_000210878.1\|878465_880103_-\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_CP051749.1\|WP_001551559.1\|869433_870219_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187605
NZ_CP051749.1\|WP_001551560.1\|870537_871815_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|349949
NZ_CP051749.1\|WP_000581937.1\|881528_881777_-\|type-II-toxin-antitoxin-system-antitoxin-MazE	unknown	unknown	gnl\|CDD\|182082
NZ_CP051749.1\|WP_001199973.1\|875184_875856_-\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
NZ_CP051749.1\|WP_001551562.1\|881854_884089_-\|GTP-diphosphokinase	unknown	unknown	gnl\|CDD\|182797
NZ_CP051749.1\|WP_001130266.1\|862707_863283_+\|glycerol-3-phosphate-responsive-antiterminator	unknown	unknown	gnl\|CDD\|224865
NZ_CP051749.1\|WP_000039721.1\|871841_873320_+\|sugar-kinase	unknown	unknown	gnl\|CDD\|212662

Protein	Function_ID	Function_description	E-value
NZ_CP051749.1\|WP_001071643.1\|880330_881122_-\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	9.36315e-160
NZ_CP051749.1\|WP_001551563.1\|884136_885438_-\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl\|CDD\|237291	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD.	0
NZ_CP051749.1\|WP_000147654.1\|866479_867889_-\|MFS-transporter	gnl\|CDD\|340929	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.45668e-51
NZ_CP051749.1\|WP_000036723.1\|877079_878378_-\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_CP051749.1\|WP_000059301.1\|867910_869365_-\|FAD-binding-oxidoreductase	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	1.6361e-82
NZ_CP051749.1\|WP_106106683.1\|863417_864766_+\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	8.20133e-53
NZ_CP051749.1\|WP_000186450.1\|885494_888251_+\|two-component-sensor-histidine-kinase-BarA	gnl\|CDD\|236848	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional.	0
NZ_CP051749.1\|WP_000254738.1\|881193_881529_-\|endoribonuclease-MazF	gnl\|CDD\|182138	PRK09907, PRK09907, endoribonuclease MazF.	1.17475e-74
NZ_CP051749.1\|WP_001521167.1\|865722_866502_-\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	gnl\|CDD\|224997	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion].	8.81851e-61
NZ_CP051749.1\|WP_162854589.1\|864865_865759_-\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	gnl\|CDD\|224936	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion].	8.28502e-89
NZ_CP051749.1\|WP_001551561.1\|876147_877020_+\|YgcG-family-protein	gnl\|CDD\|224429	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only].	9.30455e-97
NZ_CP051749.1\|WP_000109536.1\|862430_862691_+\|ferredoxin-family-protein	gnl\|CDD\|225289	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion].	4.39108e-42
NZ_CP051749.1\|WP_000210878.1\|878465_880103_-\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP051749.1\|WP_001551559.1\|869433_870219_-\|SDR-family-oxidoreductase	gnl\|CDD\|187605	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs. Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	1.56263e-137
NZ_CP051749.1\|WP_001551560.1\|870537_871815_+\|MFS-transporter	gnl\|CDD\|349949	cd06174, MFS, Major Facilitator Superfamily. The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.	7.75283e-29
NZ_CP051749.1\|WP_000581937.1\|881528_881777_-\|type-II-toxin-antitoxin-system-antitoxin-MazE	gnl\|CDD\|182082	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE.	6.19513e-48
NZ_CP051749.1\|WP_001199973.1\|875184_875856_-\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	3.98248e-155
NZ_CP051749.1\|WP_001551562.1\|881854_884089_-\|GTP-diphosphokinase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	0
NZ_CP051749.1\|WP_001130266.1\|862707_863283_+\|glycerol-3-phosphate-responsive-antiterminator	gnl\|CDD\|224865	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription].	5.83077e-88
NZ_CP051749.1\|WP_000039721.1\|871841_873320_+\|sugar-kinase	gnl\|CDD\|212662	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins. This subfamily consists of uncharacterized hypothetical bacterial proteins with similarity to Escherichia coli sugar kinase ygcE , whose functional roles are not yet clear. Escherichia coli ygcE is recognized by this model, but is not present in the alignment as it contains a deletion relative to other members of the group. These proteins belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.	2.76431e-108

>NZ_CP051749.1|WP_000039721.1|871841_873320_+|sugar-kinase
MSKKYIIGIDGGSQSTKVVMYDLEGNVVCEGKGLLQPMHTPDADTAEHPDDDLWASLCFAGHDLMSQFAGNKEDIVGIGLGSIRCCRALLKADGTPAAPLISWQDARVTRPYEHTNPDVAYVTSFSGYLTHRLTGEFKDNIANYFGQWPVDYKTWAWSEDAAVMEKFNIPRHMLFDVQMPGTVLGHITPQAALATHFPAGLPVVCTTSDKPVEALGAGLLDDETAVISLGTYIALMMNGKLLPKDPVAYWPIMSSIPQTLLYEGYGIRKGMWTVSWLRDMLGESLIQDAKAQDLSPEDLLNKKASCVPPGCNGLMTVLDWLTNPWEPYKRGIMIGFDSSMDYAWIYRSILESVALTLKNNYDNMCNEMNHFAKHVIITGGGSNSDLFMQIFADVFNLPARRNAINGCASLGAAINTAVGLGLYPDYATAVDKMVRVKDIFMPVESNAKRYNAMNKGIFKELTKHTDVILKKSYEVMHGELGNADSIQSWSNA
>NZ_CP051749.1|WP_001551560.1|870537_871815_+|MFS-transporter
MQHNSYRRWITLAIISFSGGVSFDLAYLRYIYQIPIAKFMGFSNTEIGLIMSTFGIAAIILYAPSGVIADKFSHRKMITSAMIITGLLGLLMATYPPLWVMLCIQVAFAITTILMLWSVSIKAASLLGDHSEQGKIMGWMEGLRGVGVMSLAVFTMWVFSRFAPDDSASLKTVIIIYSVVYILLGILCWFFVSDNNNLRSANNEEKQSFQLSDILAVLRISTTWYCSMVIFGVFTIYAILSYSTNYLTEMYGMSLVAASYMGIVINKIFRALCGPLGGIITTYSKVKSPTRVIQILSVLGLLALTALLVTNSNPQSVAMGIGLILLLGFTCYASRGLYWACPGEARTPSYIMGTTVGICSVIGFLPDVFVYPIIGYWQDTLPAAEAYRNMWLMGMAALAMVIVFTFLLFQKIRTADSAPAMASSK
>NZ_CP051749.1|WP_001551559.1|869433_870219_-|SDR-family-oxidoreductase
MSIESLNAFSMDFFSLKGKTAIVTGGNSGLGQAFAMALAKAGANIFIPSFVKDNGETKEMIEKQGVEVDFMQVDITAEGAPQKIIAACCERFGTVNILINNAGICKLNKVLNFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGGQWSPAYSATKHALAGFTKAYCDELGQYNIQVNGIAPGYYATDITLATRSNPETNQRVLDHIPANRWGDTQDLMGAAVFLASPASNYVNGHLLVVDGGYLVR
>NZ_CP051749.1|WP_000059301.1|867910_869365_-|FAD-binding-oxidoreductase
MSLSRAAIVDQLKEIVGADRVITDETVLKKNSIDRFRKFPDIHGIYTLPIPAAVVKLGSTEQVSRVLNFMNAHKINGVPRTGASATEGGLETVVENSVVLDGSAMNQIINIDIENMQATAQCGVPLEVLENALREKGYTTGHSPQSKPLAQMGGLVATRSIGQFSTLYGAIEDMVVGLEAVLADGTVTRIKNVPRRAAGPDIRHIIIGNEGALCYITEVTVKIFKFTPENNLFYGYILEDMKTGFNILREIMVEGYRPSIARLYDAEDGTQHFTHFADGKCVLIFMAEGNPRIAKATGEGIAEIVARYPQCQRVDSKLIETWFNNLNWGPDKVAAERVQILKTGNMGFTTEVSGCWSCIHEIYESVINRIRTEFPHADDITMLGGHSSHSYQNGTNMYFVYDYNVVDCKPEEEIDKYHNPLNKIICEETIRLGGSMVHHHGIGKHRVHWSKLEHGSAWTLLEGLKKQFDPNGIMNTGTIYPIEK
>NZ_CP051749.1|WP_000147654.1|866479_867889_-|MFS-transporter
MTGRCLFGFSGEKPFLLPDNEGIKMNTSPVRMDDLPLNRFHCRIAALTFGAHLTDGYVLGVIGYAIIQLTPAMQLTPFMAGMIGGSALLGLFLGSLVLGWISDHIGRQKIFTFSFLLITLASFLQFFATTPEHLIGLRILIGIGLGGDYSVGHTLLAEFSPRRHRGILLGAFSVVWTVGYVLASIAGHHFISESPEAWRWLLASAALPALLITLLRWGTPESPRWLLRQGRFAEAHAIVHRYFGPHVLLGDEVATATHKHIKTLFSSRYWRRTAFNSVFFVCLVIPWFVIYTWLPTIAQTIGLEDALTASLMLNALLIVGALLGLVLTHLLAHRKFLLGSFLLLAATLVVMACLPSGSSLTLLLFVLFSTTISAVSNLVGILPAESFPTDIRSLGVGFATAMSRLGAAVSTGLLPWVLAQWGMQVTLLLLAAVLLVGFVVTWLWAPETKALPLVAAGNVGGANEHSVSV
>NZ_CP051749.1|WP_001521167.1|865722_866502_-|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein
MNILLAFKAEPDAGMLAEKEWQAAAQGNSGPDVSLLRSLLGADEQAAAALLLAQRKNGTSMSLTALSMGDERALHWLRYLMALGFEEAVLLETAADLRFAPEFVARHIAEWQYQNPLELIITGCQSSEGQNGQTPFLLAEMLGWPCFTQVERFTLDAPFITLEQRTENGLRCCRVRLPAVIAVRQCGEVALPVPGMRQRMAVGKAAIIRKTVAAESPAMQCLQLARAEQQRGATLIDGQTVAEKAQKLWQDYLRQRMQP
>NZ_CP051749.1|WP_162854589.1|864865_865759_-|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein
MAGLFTPKDAAMNIAIVTINQENAATASWQAAQDFSGCTLAHWKIEPQPAVAEQVLDALVEQWQRTPADVVLFPPGTFGDELSTRLAWRLHGASICQVTSLDIPTVSVRKSHWGNALTATLQTEKRPLCLSLARQAGADKNATLPSGMQQLNIVPGALPDWLVSIENLKNVTRDPLAEARRVLVVGQGGEADNQEIAMLAEKLGAEVGYSRARVMNGGVDAEKVIGISGHLLAPEVCIVVGASGAAALMAGVRNSKFVVAINHDASAAVFSQADVGVVDDWKVVLEALVTNIHAECQ
>NZ_CP051749.1|WP_106106683.1|863417_864766_+|IS3-family-transposase
MKHSFEVKLAAVNHYLAGHAGIISTAKLFQLSHTSLSHWINLFLLHGPRALDCRHKRSYSPEDKLCVVLYALGHSESLPRVAARFNIPSHNTVKNWIKGYRKSGNEAFIRRRKEKSMTRSDDTHENEANMTPEEMKNELRYLRAENAYLKAMQEHLLEKKPPGAGEKTKVIRSLRCGHCQSDLLKAAGLARSTLYYQLSLQKAKDKYADVKQLIASIFHEHRGCYGYRRIHCELQKRGLKFSGKTVRKLMQQLGLKSPVRLKKYRSYRGNMGLAAENILQRQFKAEAPCEKWVTDITEFRAGGQKLYLSPILDLFNGEIVAWETACRPTEELVKRMLNKGLESLAEGEKPLLHSDQGWHYRIKSYQSDLADKGLVQSMSRKGNCLDNAVMENFFGHLKEEIYYRRDYRNVEELENAVNEYITYWNQKRIKLSLGGLSPVEYRTEHQKAG
>NZ_CP051749.1|WP_001130266.1|862707_863283_+|glycerol-3-phosphate-responsive-antiterminator
MPLLHLLRQNPVIAAVKDNASLQLAIDSECQFISVLYGNICTISNIVKKIKNAGKYAFIHVDLLEGASNKEVVIQFLKLVTEADGIISTKASMLKAARAEGFFCIHRLFIVDSISFHNIDKQVAQSNPDCIEILPGCMPKVLGWVTEKIRQPLIAGGLVCDEEDARNAINAGVVALSTTNTGVWTLAKKLL
>NZ_CP051749.1|WP_000109536.1|862430_862691_+|ferredoxin-family-protein
MSVARNLWRVADAPHIVPADSVERQTVQRLINACPAGLFSLTPEGDLRVDYRGCLECGTCRLLCDESTLQQWRYPPSGFGITYRFG
>NZ_CP051749.1|WP_001199973.1|875184_875856_-|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWEKLEDREVSLFSILAKTKESDKWGAASSEDLLAVIGRQGYTARHVVITGGEPCIHDLLPLTDLLEKNGFSCQIETSGTHEVRCTPNTWVTVSPKLNMRGGYEVLSQALERANEIKHPVGRVRDIEALDELLATLTDDKPRVIALQPISQKDDATRLCIETCIARNWRLSMQTHKYLNIA
>NZ_CP051749.1|WP_001551561.1|876147_877020_+|YgcG-family-protein
MRYFILIFTFVCSFVAAQPTIVPSLQQQVTDLTSSLNSQEKKELTYKLESIFNNTQVQIAVLIVPTTKDETIEKYATRVFDNWRLGDAKRNDGILIIVAWSDRTVRIQVGYGLEEKVTDALAGDIIRSNMIPAFKQQKLAQGLELAINALNNQLTSQHQYPANPSEIESASSSDHYYFAIFWVFAVMFFPFWFFHQGSNFCRACKSSVCISAIYLLDLFLFSDKTFSSAVFFFFFTFTTIMVFTCLCVLQKKASGRSYHSDNSGSGGGSSGGGFSGGGGSSGGGGASGRW
>NZ_CP051749.1|WP_000036723.1|877079_878378_-|phosphopyruvate-hydratase
MSKIVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALIGKDAKDQAGIDKIMIDLDGTENKSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>NZ_CP051749.1|WP_000210878.1|878465_880103_-|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQMAVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIFEEANPVSEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVETRGVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVDDSLVRQLYNAPTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEFQKRQAK
>NZ_CP051749.1|WP_001071643.1|880330_881122_-|nucleoside-triphosphate-pyrophosphohydrolase
MNQIDRLLTIMQRLRDPENGCPWDKEQTFATIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFADSSAENSSEVLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCANVGFDWTTLGPVVDKVYEEIDEVMYEARQAVIDQAKLEEEMGDLLFATVNLARHLGTKAEIALQKANEKFERRFREVERIVAARGLEMTGVDLETMEEVWQQVKRQEIDL
>NZ_CP051749.1|WP_000254738.1|881193_881529_-|endoribonuclease-MazF
MVSRYVPDMGDLIWVDFDPTKGSEQAGHRPAVVLSPFMYNNKTGMCLCVPCTTQSKGYPFEVVLSGQERDGVALADQVKSIAWRARGATKKGTVAPEELQLIKAKINVLIG
>NZ_CP051749.1|WP_000581937.1|881528_881777_-|type-II-toxin-antitoxin-system-antitoxin-MazE
MIHSSVKRWGNSPAVRIPATLMQALNLNIDDEVKIDLVDGKLIIEPVRKEPVFTLAELVNDITPENLHENIDWGEPKDKEVW
>NZ_CP051749.1|WP_001551562.1|881854_884089_-|GTP-diphosphokinase
MVAVRSAHINKAGEFDPEKWIASLGITSQKSCECLAETWAYCLQQTQGHPDASLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSVVNLIHGVRDMAAIRQLKATHTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKAEGVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAAAGGARSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKISGRIVPFTYQLQMGDQIEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAGRQILDDELEHLGISLKEAEKHLLPRYNFNDVDELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKSYTPQNRSKDNGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVDAVWGESYSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGS
>NZ_CP051749.1|WP_001551563.1|884136_885438_-|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MAQFYSAKRRTTTRQIITVSVNDLDSFGQGVARHNGKALFIPGLLPQENAEVTVTEDKKQYARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASEDLQQRSKSAALARLMKHEVSEVIADVPWGYRRRARLSLNYLPKTQQLQMGFRKAGSSDIVDVKQCPILVPQLEALLPKVRACLGSLQAMRHLGHVELVQATSGTLMILRHTAPLSSADREKLERFSHSEGLDLYLAPDSEILETVAGEMPWYDSNGLRLTFSPRDFIQVNAGVNQKMVACALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNDLHNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAAGVMQQIIKLEPIRIVYVSCNPATLARDSEALLKAGYTIARLAMLDMFPHTGHLESMVLFSRVK
>NZ_CP051749.1|WP_000186450.1|885494_888251_+|two-component-sensor-histidine-kinase-BarA
MTNYSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDAGASIIEPLAVSTEYGMSLQNRESIGQLISVLHRRHSDIVRAISVYDENNRLFVTSNFHLDPSSMQLGSNVPFPRQLTVTRDGDIMILRTPIISESYSPDESPSSDAKNSQNMLGYIALELDLKSVRLQQYKEIFISSVMMLFCIGIALIFGWRLMRDVTGPIRNMVNTVDRIRRGQLDSRVEGFMLGELDMLKNGINSMAMSLAAYHEEMQHNIDQATSDLRETLEQMEIQNVELDLAKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELTPTQRDHLNTIERSANNLLAIINDVLDFSKLEAGKLILESIPFPLRSTLDEVVTLLAHSSHDKGLELTLNIKSDVPDNVIGDPLRLQQIITNLVGNAIKFTENGNIDILVEKRALSNTKVQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNRGSTFWFHINLDLNPNIIIEGPSTQCLAGKRLAYVEPNSAAAQCTLDILSETPLEVVYSPTFSALPPAHYDMMLLGIAVTFREPLTMQHERLAKAVSMTDFLMLALPCHAQVNAEKLKQDGIGACLLKPLTPTRLLPALTEFCHHKQNTLLPVTDESKLAMTVMAVDDNPANLKLIGALLEDMVQHVELCDSGHQAVERAKQMPFDLILMDIQMPDMDGIRACELIHQLPHQQQTPVIAVTAHAMAGQKEKLLGAGMSDYLAKPIEEERLHNLLLRYKPGSGISSRVVTPEVNEIVVNPNATLDWQLALRQAAGKTDLARDMLQMLLDFLPEVRNKVEEQLVGENPEGLVDLIHKLHGSCGYSGVPRMKNLCQLIEQQLRSGTKEEDLEPELLELLDEMDNVAREASKILG

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Crispr_ID: NZ_CP051749_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP051749_3

2431480-2431603

Orphan

Consensus_repeat	Method
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP051749_3

>merge|NZ_CP051749|3|2431480-2431603|CRISPRCasFinder
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTACGGACGCAGGATGGTGCGTTCAATTGGACTCGAACCAACGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA

>NZ_CP051749|3|3|2431480-2431603|CRISPRCasFinder
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	CGGACGCAGGATGGTGCGTTCAATTGGACTCGAACCAA
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP051749.1\|WP_000007283.1\|2442070_2442652_-\|superoxide-dismutase-[Fe]	unknown	unknown	gnl\|CDD\|182534
NZ_CP051749.1\|WP_001520610.1\|2424214_2426317_+\|aldehyde-ferredoxin-oxidoreductase	unknown	unknown	gnl\|CDD\|236629
NZ_CP051749.1\|WP_001551168.1\|2426329_2426968_+\|YdhW-family-putative-oxidoreductase-system-protein	unknown	unknown	gnl\|CDD\|182160
NZ_CP051749.1\|WP_001295403.1\|2420932_2422345_-\|pyruvate-kinase-PykF	unknown	unknown	gnl\|CDD\|181699
NZ_CP051749.1\|WP_001070230.1\|2423567_2424194_+\|ferredoxin-like-protein	unknown	unknown	gnl\|CDD\|182135
NZ_CP051749.1\|WP_001070006.1\|2427696_2428482_+\|thiosulfate-reductase-cytochrome-B-subunit	unknown	unknown	gnl\|CDD\|184968
NZ_CP051749.1\|WP_001309532.1\|2427031_2427700_+\|4Fe-4S-dicluster-domain-containing-protein	unknown	unknown	gnl\|CDD\|274451
NZ_CP051749.1\|WP_000102278.1\|2440500_2440590_+\|stress-response-protein-YnhF	unknown	unknown	unknown
NZ_CP051749.1\|WP_000534310.1\|2431918_2433175_+\|AIDA-repeat-containing-protein	unknown	unknown	gnl\|CDD\|137602
NZ_CP051749.1\|WP_000190982.1\|2439176_2440202_-\|HTH-type-transcriptional-repressor-PurR	unknown	unknown	gnl\|CDD\|236739
NZ_CP051749.1\|WP_000269493.1\|2438247_2439180_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182948
NZ_CP051749.1\|WP_000528342.1\|2422901_2423111_+\|fumarate-hydratase-FumD	unknown	unknown	gnl\|CDD\|182359
NZ_CP051749.1\|WP_001174939.1\|2433215_2434589_-\|multidrug-efflux-MATE-transporter-MdtK	unknown	unknown	gnl\|CDD\|234981
NZ_CP051749.1\|WP_000493947.1\|2434803_2435445_+\|riboflavin-synthase	unknown	unknown	gnl\|CDD\|183846
NZ_CP051749.1\|WP_001551167.1\|2429309_2430914_-\|FAD-NAD(P)-binding-protein	unknown	unknown	gnl\|CDD\|182134
NZ_CP051749.1\|WP_001182362.1\|2436923_2438135_-\|Bcr/CflA-family-multidrug-efflux-MFS-transporter	unknown	unknown	gnl\|CDD\|182924
NZ_CP051749.1\|WP_001551165.1\|2440755_2441925_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|225371
NZ_CP051749.1\|WP_001551166.1\|2431039_2431345_-\|monooxygenase	unknown	unknown	gnl\|CDD\|182975
NZ_CP051749.1\|WP_000587586.1\|2428485_2429298_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182159
NZ_CP051749.1\|WP_000098896.1\|2435484_2436633_-\|cyclopropane-fatty-acyl-phospholipid-synthase	unknown	unknown	gnl\|CDD\|183282

Protein	Function_ID	Function_description	E-value
NZ_CP051749.1\|WP_000007283.1\|2442070_2442652_-\|superoxide-dismutase-[Fe]	gnl\|CDD\|182534	PRK10543, PRK10543, superoxide dismutase [Fe].	3.77321e-138
NZ_CP051749.1\|WP_001520610.1\|2424214_2426317_+\|aldehyde-ferredoxin-oxidoreductase	gnl\|CDD\|236629	PRK09849, PRK09849, putative oxidoreductase; Provisional.	0
NZ_CP051749.1\|WP_001551168.1\|2426329_2426968_+\|YdhW-family-putative-oxidoreductase-system-protein	gnl\|CDD\|182160	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein.	4.60379e-120
NZ_CP051749.1\|WP_001295403.1\|2420932_2422345_-\|pyruvate-kinase-PykF	gnl\|CDD\|181699	PRK09206, PRK09206, pyruvate kinase PykF.	0
NZ_CP051749.1\|WP_001070230.1\|2423567_2424194_+\|ferredoxin-like-protein	gnl\|CDD\|182135	PRK09898, PRK09898, ferredoxin-like protein.	6.99609e-140
NZ_CP051749.1\|WP_001070006.1\|2427696_2428482_+\|thiosulfate-reductase-cytochrome-B-subunit	gnl\|CDD\|184968	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional.	3.09269e-162
NZ_CP051749.1\|WP_001309532.1\|2427031_2427700_+\|4Fe-4S-dicluster-domain-containing-protein	gnl\|CDD\|274451	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein. Members of this protein family are the Fe-S protein, NrfC, of a cytochrome c nitrite reductase system for which the pentaheme cytochrome c protein, NrfB (family TIGR03146) is an unambiguous marker. Members of this protein family show similarity to other ferredoxin-like proteins, including a subunit of a polysulfide reductase. [Energy metabolism, Electron transport].	1.77106e-75
NZ_CP051749.1\|WP_000534310.1\|2431918_2433175_+\|AIDA-repeat-containing-protein	gnl\|CDD\|137602	PRK09945, PRK09945, hypothetical protein; Provisional.	0
NZ_CP051749.1\|WP_000190982.1\|2439176_2440202_-\|HTH-type-transcriptional-repressor-PurR	gnl\|CDD\|236739	PRK10703, PRK10703, HTH-type transcriptional repressor PurR.	0
NZ_CP051749.1\|WP_000269493.1\|2438247_2439180_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|182948	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional.	0
NZ_CP051749.1\|WP_000528342.1\|2422901_2423111_+\|fumarate-hydratase-FumD	gnl\|CDD\|182359	PRK10292, PRK10292, fumarate hydratase FumD.	2.11502e-34
NZ_CP051749.1\|WP_001174939.1\|2433215_2434589_-\|multidrug-efflux-MATE-transporter-MdtK	gnl\|CDD\|234981	PRK01766, PRK01766, multidrug efflux protein; Reviewed.	0
NZ_CP051749.1\|WP_000493947.1\|2434803_2435445_+\|riboflavin-synthase	gnl\|CDD\|183846	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional.	2.24506e-123
NZ_CP051749.1\|WP_001551167.1\|2429309_2430914_-\|FAD-NAD(P)-binding-protein	gnl\|CDD\|182134	PRK09897, PRK09897, FAD-NAD(P)-binding protein.	0
NZ_CP051749.1\|WP_001182362.1\|2436923_2438135_-\|Bcr/CflA-family-multidrug-efflux-MFS-transporter	gnl\|CDD\|182924	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter.	0
NZ_CP051749.1\|WP_001551165.1\|2440755_2441925_+\|MFS-transporter	gnl\|CDD\|225371	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism].	8.65692e-98
NZ_CP051749.1\|WP_001551166.1\|2431039_2431345_-\|monooxygenase	gnl\|CDD\|182975	PRK11118, PRK11118, putative monooxygenase; Provisional.	2.52152e-64
NZ_CP051749.1\|WP_000587586.1\|2428485_2429298_+\|hypothetical-protein	gnl\|CDD\|182159	PRK09946, PRK09946, hypothetical protein; Provisional.	1.63281e-174
NZ_CP051749.1\|WP_000098896.1\|2435484_2436633_-\|cyclopropane-fatty-acyl-phospholipid-synthase	gnl\|CDD\|183282	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase.	0

>NZ_CP051749.1|WP_001551166.1|2431039_2431345_-|monooxygenase
MATLLQLHFAFNGPFGDAMAEQLEPLAESINQEPGFLWKVWTESEKNHEAGGIYLFTDEKSALAYLEKHTARLKNLGVEEVVAKVFDVNEPLSQINQAKLA
>NZ_CP051749.1|WP_001551167.1|2429309_2430914_-|FAD-NAD(P)-binding-protein
MKKIAIVGAGPTGIYTLFSLLQQQTPLSISIFEQADEAGVGMPYSDEENSKLMLANIASIEIPPIYCTYLEWLQKQEASHLQRYGVKKETLHDRQFLPRILLGEYFRDQFLRLVDQARQQKFAVAVYESCQVTDLQITNAGVMLATNQDLPSETFDLAVIATGHVWPDEEEATRTYFPSPWSGLMEAKVDACNVGIMGTSLSGLDAAMAVAIQHGSFIEDDKQHVIFHRDNASEKLNITLMSRTGILPEADFYCPIPYEPLHIVTDQALNAEIQKGEYGLLDRVFRLIVEEIKFADPGWSQRIALESLNVDSFAQAWFAERKQRDPFDWAEKNLQEVERNKREKHTVPWRYVILRLHEAVQEIVPHLNEHDHKRFSKGLARVFIDNYAAIPSESIRRLLALREAGIIHILALGEDYEMEINESRTVLKTEDNSYSFDVFIDARGQRPLKVKDIPFPGLREQLQKTGDKNPDVGEDYTLQQPEDIRGRVAFGALPWLMHDQPFVQGLTACAEIGEAMARAVVKPASRARRRLSFD
>NZ_CP051749.1|WP_000587586.1|2428485_2429298_+|hypothetical-protein
MIITRADLREWRIGAVMYRWFLRHFPRGGSYADIHHALIEEGYTDWAESLVEYAWKKWLADENFAHQEVSSMQKLATDPGERPFCSQFARSDDHARIGCCEDNARIATAGYAAQIASMGYSVRIGSVGFNSHIGSSGERARVAVTGNSSRISSAGDSSRIANTGMRVRVCTLGERCHVASNGDLVQIASFGANARIANSGDNVHIIASGEDSTIVSTGVVDSIILGPGGSAALAYHDGERVRFAVAIEGENNIRAGVRYRLNEQHQFVEC
>NZ_CP051749.1|WP_001070006.1|2427696_2428482_+|thiosulfate-reductase-cytochrome-B-subunit
MNPSQHAEQFQSQLANYVPQFTPQFWPVWLIIAGLLLVGMWFVLGLHALLRARGVKKSATDHGEKVYLYSKAVRLWHWSNALLFVLLLASGLINHFALVGATAVKSLVAVHEVCGFLLLACWLGFVLINAVGGNGHHYRIRRQGWLERAAKQTRFYLFGIMQGEEHPFPATTQSKFNPLQQVAYIGVMYGLLPLLLLTGLLCLYPQAVGDVFPGVRYWLLQAHFALAFISLFFIFGHLYLCTTGRTPHETFKSMVDGYHRH
>NZ_CP051749.1|WP_001309532.1|2427031_2427700_+|4Fe-4S-dicluster-domain-containing-protein
MSFTRRKFVLGMGTVIFFTGSASSLLANTRQEKKVRYAMIHDESRCNGCNICARACRKTNHVPAQGSRLSIAHIPVTDNDNETQYHYFRQSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVADKCDFCAESRLAKGFPPICVSACPEHALIFGREDSPEIQAWLQENKYYQYQLPGAGKPHLYRRFGQHLIKKENV
>NZ_CP051749.1|WP_001551168.1|2426329_2426968_+|YdhW-family-putative-oxidoreductase-system-protein
MNHQDELPLAKVSEVDEAKRQWLQGMRHPVDTVTEPEPAEILAEFIRQHSAAGQLVARAVFLSPPYSVAEEELSVLLESIKQNGDHADIACLTGSQDDYYYSTQAMSENYAAMSLQVVEQDICRAIAHAVRFECQTYPRPYKVAMLMQAPYYFQEAQIESAIAAMDIAPEYADIRQVESSTAVLYLFSERFMTYGKAYGLCEWFEVEQFQNP
>NZ_CP051749.1|WP_001520610.1|2424214_2426317_+|aldehyde-ferredoxin-oxidoreductase
MANGWTGNILRVNLTTGNITLEDSSKFKSFVGGMGFGYKIMYDEVPPGTKPFDEANKLVFATGPLTGSGAPCSSRVNITSLSTFTKGNLVVDAHMGGFFAAQMKFAGYDVIIIEGKAKSPVWLNIKDDKVSLEKADFLWGKGTRATTEEICRLTSPETCVAAIGQAGENLVPLSGMLNSRNHSGGAGTGAIMGSKNLKAIAVEGTKGVNIADRQEMKRLNDYMMTELIGANNNHVVPSTPQSWAEYSDPKSRWTARKGLFWGAAEGGPIETGEIPPGNQNTVGFRTYKSVFDLGPAAEKYTVKMSGCHSCPIRCMTQMNIPRVKEFGVPGTGGNTCVANFVHTTIFPNGPKDFEDKDDGRVIGNLVGLNLFDDYGLWCNYGQLHRDFTYCYSKGVFKRVLPAEEYAEIRWDQLEAGDVNFIKDFYYRLAHRVGELSHLADGSYAIAERWNLGEEYWGYAKNKLWSPFGYPVHHANEASAQVGSIVNCMFNRDCMTHTHINFIGSGLPLKLQREVAKELFGSEDAYDETKNYTPINDAKIKYAKWSLLRVCLHNAVTLCNWVWPMTVSPLKSRNYRGDLALEAKFFKAITGEEMTQEKLDLAAERIFTLHRAYTVKLMQTKDMRNEHDLICSWVFDKDPQIPVFTEGTDKMDRDDMHASLTMFYKEMGWDPQLGCPTRETLQRLGLEDIAADLAAHNLLPA
>NZ_CP051749.1|WP_001070230.1|2423567_2424194_+|ferredoxin-like-protein
MNPVDRPLLDIGLTRLEFLRISGKGLAGLTIAPALLSLLGCKQEDIDSGTVGLINTPKGVLVTQRARCTGCHRCEISCTNFNDGSVGTFFSRIKIHRNYFFGDNGVGSGGGLYGDLNYTADTCRQCKEPQCMNVCPIGAITWQQKEGCITVDHKRCIGCSACTTACPWMMATVNTESKKSSKCVLCGECANACPTGALKIIEWKDITV
>NZ_CP051749.1|WP_000528342.1|2422901_2423111_+|fumarate-hydratase-FumD
MGNRTKEDELYREMCRVVGKVVLEMRDLGQEPKHIVIAGVLRTALANKRIQRSELEKQAMETVINALVK
>NZ_CP051749.1|WP_001295403.1|2420932_2422345_-|pyruvate-kinase-PykF
MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKTAAILLDTKGPEIRTMKLEGGNDVSLKAGQTFTFTTDKSVIGNSEMVAVTYEGFTTDLSVGNTVLVDDGLIGMEVTAIEGNKVICKVLNNGDLGENKGVNLPGVSIALPALAEKDKQDLIFGCEQGVDFVAASFIRKRSDVIEIREHLKAHGGENIHIISKIENQEGLNNFDEILEASDGIMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVITATQMLDSMIKNPRPTRAEAGDVANAILDGTDAVMLSGESAKGKYPLEAVSIMATICERTDRVMNSRLEFNNDNRKLRITEAVCRGAVETAEKLDAPLIVVATQGGKSARAVRKYFPDATILALTTNEKTAHQLVLSKGVVPQLVKEITSTDDFYRLGKELALQSGLAHKGDVVVMVSGALVPSGTTNTASVHVL
>NZ_CP051749.1|WP_000534310.1|2431918_2433175_+|AIDA-repeat-containing-protein
MGSDAKNLMSDGNVQIVKTGEVIGVTQLTEGELIVEAGGRAENTVVTGAGWLKVATGGIAKCTQYGNNGTLSVSDGAIATDIVQSEGGAISLSTLATVNGRHPEGEFSVDKGYACGLLLENGGNLRVLEGHRAEKIILDQEGGLLVNGTTSAVVVDEGGELLVYPGGEASNCEINQGGVFMLAGKANDTLLAGGTMNNLGGEDSDTIVENGGIYRLGTDGLQLYSSGKTQNLSVNVGGRAEVHAGTLENAVIQGGTVILLSPTSADENFVVEEDRAPVELTGNVALLDGASMIIGYGADLQQSTITVQQGGVLILDGSTVKGDSVTFSVGNINLNGGKLWLITGAATHVQLKVKRLRGEGAICLQTSAKEISPDFINVKGEVTGDIHVEITDASRQTLCNALKLQPDEDGIGATLQPA
>NZ_CP051749.1|WP_001174939.1|2433215_2434589_-|multidrug-efflux-MATE-transporter-MdtK
MQKYISEARLLLALAIPVILAQIAQTAMGFVDTVMAGGYSATDMAAVAIGTSIWLPAILFGHGLLLALTPVIAQLNGSGRRERIAHQVRQGFWLAGFVSVLIMLVLWNAGYIIRSMENIDPALADKAVGYLRALLWGAPGYLFFQVARNQCEGLAKTKPGMVMGFIGLLVNIPVNYIFIYGHFGMPELGGVGCGVATAAVYWVMFLAMVSYIKRARSMRDIRNEKGTAKPDPAVMKRLIQLGLPIALALFFEVTLFAVVALLVSPLGIVDVAGHQIALNFSSLMFVLPMSLAAAVTIRVGYRLGQGSTLDAQTAARTGLMVGVCMATLTAIFTVSLREQIALLYNDNPEVVTLAAHLMLLAAVYQISDSIQVIGSGILRGYKDTRSIFYITFTAYWVLGLPSGYILALTDLVVEPMGPAGFWIGFIIGLTSAAIMMMLRMRFLQRLPSAIILQRAAR
>NZ_CP051749.1|WP_000493947.1|2434803_2435445_+|riboflavin-synthase
MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAHNGCCLTVTEINGNHVSFDLMKETLRITNLGDLKVGDWVNVERAAKFSDEIGGHLMSGHIMTTAEVAKILTSENNRQIWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPTRFCVHLIPETLERTTLGKKKLGARVNIEIDPQTQAVVDTVERVLAARENAMNQPGTEA
>NZ_CP051749.1|WP_000098896.1|2435484_2436633_-|cyclopropane-fatty-acyl-phospholipid-synthase
MSSSCIEEVSVPDDNWYRIANELLSRAGIAINGSAPADIRVKNPDFFKRVLQEGSLGLGESYMDGWWECDRLDMFFSKVLRAGLENQLPHHFKDTLRIAGARLFNLQSKKRAWIVGKEHYDLGNDLFSRMLDPFMQYSCAYWKDADNLESAQQAKLKMICEKLQLKPGMRVLDIGCGWGGLAHYMASNYDVSVVGVTISAEQQKMAQERCEGLDVTILLQDYRDLNDQFDRIVSVGMFEHVGPKNYDTYFAVVDRNLKPEGIFLLHTIGSKKTDLNVDPWINKYIFPNGCLPSVRQIAQSSEPHFVMEDWHNFGADYDTTLMAWYERFLAAWPEIADNYSERFKRMFTYYLNACAGAFRARDIQLWQVVFSRGVENGLRVAR
>NZ_CP051749.1|WP_001182362.1|2436923_2438135_-|Bcr/CflA-family-multidrug-efflux-MFS-transporter
MQPGKRFLVWLAGLSVLGFLATDMYLPAFAAIQADLQTPASAVSASLSLFLAGFAAAQLLWGPLSDRYGRKPVLLIGLTIFALGSLGMLWVENAATLLVLRFVQAVGVCAAAVIWQALVTDYYPSQKVNRIFATIMPLVGLSPALAPLLGSWLLVHFSWQAIFATLFAITVVLILPIFWLKPTTKARNNSQDGLTFTDLLRSKTYRGNVLIYAACSASFFAWLTGSPFILSEMGYSPAVIGLSYVPQTIAFLIGGYGCRAALQKWQGKQLLPWLLVLFAVSVIATWAAGFISHVSLVEILIPFCVMAIANGAIYPIVVAQALRPFPHATGRAAALQNTLQLGLCFLASLVVSWLISISTPLLTTTSVMLSTVVLVALGYMMQRCEEVDCQNHGNAEVAHSESH
>NZ_CP051749.1|WP_000269493.1|2438247_2439180_+|LysR-family-transcriptional-regulator
MWSEYSLEVVDAVARNGSFSAAAQELHRVPSAVSYTVRQLEEWLAVPLFERRHRDVELTAAGAWFLKEGRSVVKKMQITRQQCQQIANGWRGQLAIAVDNIVRPERTRQMIVDFYRHFDDVELLVFQEVFNGVWDALSDGRVELAIGATRAIPVGGRYAFRDMGMLSWSCVVASHHPLALMDGPFSDDTLRNWPSLVREDTSRTLPKRITWLLDNQKRLVVPDWESSATCISAGLCIGMVPTHFAKPWLNEGKWVALELENPFPDSACCLTWQQNDMSPALTWLLEYLGDSETLNKEWLREPEETPATGD
>NZ_CP051749.1|WP_000190982.1|2439176_2440202_-|HTH-type-transcriptional-repressor-PurR
MATIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELHYSPSAVARSLKVNHTKSIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWNNLEKQRAYLSMMAQKRVDGLLVMCSEYPEPLLAMLEEYRHIPMVVMDWGEAKADFTDAVIDNAFEGGYMAGRYLIERGHREIGVIPGPLERNTGAGRLAGFMKAMEEAMIKVPESWIVQGDFEPESGYRAMQQILSQPHRPTAVFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDNVRNARYFTPALTTIHQPKDSLGETAFNMLLDRIVNKREEPQSIEVHPRLIERRSVADGPFRDYRR
>NZ_CP051749.1|WP_000102278.1|2440500_2440590_+|stress-response-protein-YnhF
MSTDLKFSLVTTIIVLGLIVAVGLTAALH
>NZ_CP051749.1|WP_001551165.1|2440755_2441925_+|MFS-transporter
MKINYPLLALAIGAFGIGTTEFSPMGLLPVIARGVDISIPAAGMLISAYAVGVMVGAPLMTLLLSHRARRSALIFLMAIFTLGNVLSAIAPDYMTLMLSRILTSLNHGAFFGLGSVVAASVVPKHKQASAVATMFMGLTLANIGGVPAATWLGETIGWRMSFLATAGLGVISMVSLFFSLPKGGAGARPEVKKELAVLMRPQVLSALLTTVLGAGAMFTLYTYISPVLQSITHATPVFVTAMLVLIGVGFSIGNYLGGKLADRSVNGTLKGFLLLLMVIMLAIPFLARNEFGAAISMVVWGAATFAVVPPLQMRVMRVASEAPGLSSSVNIGAFNLGNALGAAAGGAVISAGLGYSFVPVMGAIVAGLALLLVFMSARKQPEAVCVANS
>NZ_CP051749.1|WP_000007283.1|2442070_2442652_-|superoxide-dismutase-[Fe]
MSFELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKGTAFEGKSLEEIIRSSEGGVFNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFGSFADFKAQFTDAAIKNFGSGWTWLVKNSDGKLAIVSTSNAGTPLTTDATPLLTVDVWEHAYYIDYRNARPGYLEHFWALVNWEFVAKNLAA

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Crispr_ID: NZ_CP051749_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP051749_4

3187621-3187712

Orphan

Consensus_repeat	Method
CCACCTTTTTTACCTGCTTCAGATGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP051749_4

>merge|NZ_CP051749|4|3187621-3187712|CRISPRCasFinder
CCACCTTTTTTACCTGCTTCAGATGCGCGCTGCGGGTCATTTTTGAAATTACCCCCGCTGTGCTGTCCACCTTTTTTACCTGCTTCTGATGC

>NZ_CP051749|4|4|3187621-3187712|CRISPRCasFinder
CCACCTTTTTTACCTGCTTCAGATGC	GCGCTGCGGGTCATTTTTGAAATTACCCCCGCTGTGCTGT
CCACCTTTTTTACCTGCTTCTGATGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP051749.1\|WP_000024560.1\|3192988_3193294_+\|chaperone-modulator-CbpM	unknown	unknown	gnl\|CDD\|182346
NZ_CP051749.1\|WP_001544437.1\|3193445_3194045_-\|molecular-chaperone-TorD	unknown	unknown	gnl\|CDD\|235326
NZ_CP051749.1\|WP_001550934.1\|3198554_3199583_-\|TMAO-reductase-system-periplasmic-protein-TorT	unknown	unknown	gnl\|CDD\|236801
NZ_CP051749.1\|WP_001143120.1\|3188752_3188980_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182285
NZ_CP051749.1\|WP_001550939.1\|3184252_3185053_+\|pyrimidine-utilization-protein-D	unknown	unknown	gnl\|CDD\|211851
NZ_CP051749.1\|WP_001028095.1\|3185663_3186158_+\|pyrimidine-utilization-flavin-reductase-protein-F	unknown	unknown	gnl\|CDD\|132654
NZ_CP051749.1\|WP_001151437.1\|3188135_3188732_+\|NAD(P)H:quinone-oxidoreductase	unknown	unknown	gnl\|CDD\|179647
NZ_CP051749.1\|WP_001126780.1\|3183858_3184245_+\|pyrimidine-utilization-protein-C	unknown	unknown	gnl\|CDD\|274677
NZ_CP051749.1\|WP_000979516.1\|3176871_3177081_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051749.1\|WP_001550936.1\|3194041_3196588_-\|trimethylamine-N-oxide-reductase-TorA	unknown	unknown	gnl\|CDD\|237909
NZ_CP051749.1\|WP_001550938.1\|3185062_3185653_+\|malonic-semialdehyde-reductase	unknown	unknown	gnl\|CDD\|180040
NZ_CP051749.1\|WP_001365093.1\|3186178_3187507_+\|pyrimidine-utilization-transport-protein-G	unknown	unknown	gnl\|CDD\|132655
NZ_CP051749.1\|WP_000420641.1\|3192068_3192989_+\|curved-DNA-binding-protein	unknown	unknown	gnl\|CDD\|182347
NZ_CP051749.1\|WP_001446784.1\|3183154_3183847_+\|peroxyureidoacrylate/ureidoacrylate-amidohydrolase-RutB	unknown	unknown	gnl\|CDD\|163356
NZ_CP051749.1\|WP_000191701.1\|3181137_3181776_-\|HTH-type-transcriptional-regulator-RutR	unknown	unknown	gnl\|CDD\|184970
NZ_CP051749.1\|WP_001044307.1\|3189017_3190259_-\|bifunctional-glucose-1-phosphatase/inositol-phosphatase	unknown	unknown	gnl\|CDD\|182284
NZ_CP051749.1\|WP_001313729.1\|3182063_3183155_+\|pyrimidine-utilization-protein-A	unknown	unknown	gnl\|CDD\|163355
NZ_CP051749.1\|WP_001550935.1\|3196587_3197760_-\|pentaheme-c-type-cytochrome-TorC	unknown	unknown	gnl\|CDD\|184992
NZ_CP051749.1\|WP_001550940.1\|3177135_3181098_+\|trifunctional-transcriptional-regulator/proline-dehydrogenase/L-glutamate-gamma-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|236989
NZ_CP051749.1\|WP_001120121.1\|3197889_3198582_+\|two-component-system-response-regulator-TorR	unknown	unknown	gnl\|CDD\|182711

Protein	Function_ID	Function_description	E-value
NZ_CP051749.1\|WP_000024560.1\|3192988_3193294_+\|chaperone-modulator-CbpM	gnl\|CDD\|182346	PRK10265, PRK10265, chaperone modulator CbpM.	5.75956e-65
NZ_CP051749.1\|WP_001544437.1\|3193445_3194045_-\|molecular-chaperone-TorD	gnl\|CDD\|235326	PRK04976, torD, chaperone protein TorD; Validated.	6.58604e-84
NZ_CP051749.1\|WP_001550934.1\|3198554_3199583_-\|TMAO-reductase-system-periplasmic-protein-TorT	gnl\|CDD\|236801	PRK10936, PRK10936, TMAO reductase system periplasmic protein TorT; Provisional.	5.49027e-176
NZ_CP051749.1\|WP_001550939.1\|3184252_3185053_+\|pyrimidine-utilization-protein-D	gnl\|CDD\|211851	TIGR03611, RutD, pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.	1.08309e-139
NZ_CP051749.1\|WP_001028095.1\|3185663_3186158_+\|pyrimidine-utilization-flavin-reductase-protein-F	gnl\|CDD\|132654	TIGR03615, flavoprotein_oxidoreductase, pyrimidine utilization flavin reductase protein F. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the flavin reductase family defined by pfam01613. Presumably, this protein recycles the flavin of the RutA luciferase-like oxidoreductase.	3.76111e-106
NZ_CP051749.1\|WP_001151437.1\|3188135_3188732_+\|NAD(P)H:quinone-oxidoreductase	gnl\|CDD\|179647	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional.	8.51484e-133
NZ_CP051749.1\|WP_001550938.1\|3185062_3185653_+\|malonic-semialdehyde-reductase	gnl\|CDD\|180040	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional.	8.62734e-131
NZ_CP051749.1\|WP_001550936.1\|3194041_3196588_-\|trimethylamine-N-oxide-reductase-TorA	gnl\|CDD\|237909	PRK15102, PRK15102, trimethylamine-N-oxide reductase TorA.	0
NZ_CP051749.1\|WP_001126780.1\|3183858_3184245_+\|pyrimidine-utilization-protein-C	gnl\|CDD\|274677	TIGR03610, RutC, pyrimidine utilization protein C. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the endoribonuclease L-PSP family defined by pfam01042.	5.99808e-85
NZ_CP051749.1\|WP_001143120.1\|3188752_3188980_+\|hypothetical-protein	gnl\|CDD\|182285	PRK10174, PRK10174, hypothetical protein; Provisional.	8.66725e-44
NZ_CP051749.1\|WP_001365093.1\|3186178_3187507_+\|pyrimidine-utilization-transport-protein-G	gnl\|CDD\|132655	TIGR03616, Putative_pyrimidine_permease_RutG, pyrimidine utilization transport protein G. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the uracil-xanthine permease family defined by TIGR00801. As well as the The Nucleobase:Cation Symporter-2 (NCS2) Family (TC 2.A.40).	0
NZ_CP051749.1\|WP_000420641.1\|3192068_3192989_+\|curved-DNA-binding-protein	gnl\|CDD\|182347	PRK10266, PRK10266, curved DNA-binding protein.	0
NZ_CP051749.1\|WP_001446784.1\|3183154_3183847_+\|peroxyureidoacrylate/ureidoacrylate-amidohydrolase-RutB	gnl\|CDD\|163356	TIGR03614, RutB, pyrimidine utilization protein B.	1.68103e-168
NZ_CP051749.1\|WP_000191701.1\|3181137_3181776_-\|HTH-type-transcriptional-regulator-RutR	gnl\|CDD\|184970	PRK15008, PRK15008, HTH-type transcriptional regulator RutR; Provisional.	1.3356e-153
NZ_CP051749.1\|WP_001044307.1\|3189017_3190259_-\|bifunctional-glucose-1-phosphatase/inositol-phosphatase	gnl\|CDD\|182284	PRK10173, PRK10173, glucose-1-phosphatase/inositol phosphatase; Provisional.	0
NZ_CP051749.1\|WP_001313729.1\|3182063_3183155_+\|pyrimidine-utilization-protein-A	gnl\|CDD\|163355	TIGR03612, RutA, pyrimidine utilization protein A. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the luciferase family defined by pfam00296 and is likely a FMN-dependent monoxygenase. [Unknown function, Enzymes of unknown specificity].	0
NZ_CP051749.1\|WP_001550935.1\|3196587_3197760_-\|pentaheme-c-type-cytochrome-TorC	gnl\|CDD\|184992	PRK15032, PRK15032, pentaheme c-type cytochrome TorC.	0
NZ_CP051749.1\|WP_001550940.1\|3177135_3181098_+\|trifunctional-transcriptional-regulator/proline-dehydrogenase/L-glutamate-gamma-semialdehyde-dehydrogenase	gnl\|CDD\|236989	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed.	0
NZ_CP051749.1\|WP_001120121.1\|3197889_3198582_+\|two-component-system-response-regulator-TorR	gnl\|CDD\|182711	PRK10766, PRK10766, two-component system response regulator TorR.	1.0786e-137

>NZ_CP051749.1|WP_001365093.1|3186178_3187507_+|pyrimidine-utilization-transport-protein-G
MAMFGFPHWQLKSTSTESGVVAPDERLPFAQTAVMGVQHAVAMFGATVLMPILMGLDPNLSILMSGIGTLLFFFITGGRVPSYLGSSAAFVGVVIAATGFNGQGINPNISIALGGIIACGLVYTVIGLVVMKIGTRWIERLMPPVVTGAVVMAIGLNLAPIAVKSVSASAFDSWMAVMTVLCIGLVAVFTRGMIQRLLILVGLIVACLLYGVMTNVLGLGKAVDFTLVSHAAWFGLPHFSTPAFNGQAMMLIAPVAVILVAENLGHLKAVAGMTGRNMDPYMGRAFVGDGLATMLSGSVGGSGVTTYAENIGVMAVTKVYSTLVFVAAAVIAMLLGFSPKFGALIHTIPAPVIGGASIVVFGLIAVAGARIWVQNRVDLSQNGNLIMVAVTLVLGAGDFALTLGGFTLGGIGTATFGAILLNALLSRRLVDVPPPEVVHQEP
>NZ_CP051749.1|WP_001028095.1|3185663_3186158_+|pyrimidine-utilization-flavin-reductase-protein-F
MNIVDQQTFRDAMSCMGAAVNIITTDGPAGRAGFTASAVCSVTDTPPTLLVCLNRGASVWPVFNENRTLCVNTLSAGQEPLSNLFGGKTPMEHRFAAARWQTGVTGCPQLEEALVSFDCRISQVVSVGTHDILFCAIEAIHRHATPYGLVWFDRSYHALMRPAC
>NZ_CP051749.1|WP_001550938.1|3185062_3185653_+|malonic-semialdehyde-reductase
MNEAISPGALSTLFTDARTHNGWRETPVSDETLRELYALMKWGPTSANCSPARIVFIRTAEGKERLRPALSSGNLQKTLTAPVTAIVAWDSEFYERLPQLFPHGDARSWFTSSPQLAEETAFRNSSIQAAYLIVACRALGLDTGPMSGFDRQHVDDAFFTGSTLKSNLLINIGYGDSSKLYARLPRLSFEEACGLL
>NZ_CP051749.1|WP_001550939.1|3184252_3185053_+|pyrimidine-utilization-protein-D
MKLSLSPPPYADAPVVVLISGLGGSGSYWLPQLAVLEQEYQVICYDQRGTGNNPDTLEEDYSIAQMAAELHQALVAAGIERYAVVGHALGALVGMQLALDYPASLTVLVSVNGWLRINAHTRRCFQVREQLLHSGGAQAWVEAQPLFLYPADWMAARAPRLEAEDALALAHFQGKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVPTACSSELHAALPDSQKMVMRYGGHACNVTDPETFNALLLNGLASLLHHREAAL
>NZ_CP051749.1|WP_001126780.1|3183858_3184245_+|pyrimidine-utilization-protein-C
MPKSVIIPAGSSAPLAPFVPGTLADGVVYVSGTLAFDQHNNVLFADDPKAQTRHVLETIRKVIETAGGTMADVTFNSIFITDWKNYAAINEIYAEFFPGDKPARFCIQCGLVKPDALVEIATIAHIAK
>NZ_CP051749.1|WP_001446784.1|3183154_3183847_+|peroxyureidoacrylate/ureidoacrylate-amidohydrolase-RutB
MTILTARPEAITFDPQQSALIVVDMQNAYATPGGYLDLAGFDVSTTRPVIANIQTAVTAARAAGMLIIWFQNGWDEQYVEAGGPGSPNFHKSNALKTMRKQPQLQGKLLAKGSWDYQLVDELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTGIATNVCVESTLRDGFFLEYFGVVLEDATHQAGPEFAQKAALFNIETFFGWVSDVETFCDALSPTSFARIA
>NZ_CP051749.1|WP_001313729.1|3182063_3183155_+|pyrimidine-utilization-protein-A
MKIGVFVPIGNNGWLISTHAPQYMPTFELNKAIVQKAEHYHFDFALSMIKLRGFGGKTEFWDHNLESFTLMAGLAAVTSRIQIYATAATLTLPPAIVARMAATIDSISGGRFGVNLVTGWQKPEYEQMGIWPGDDYFSRRYDYLTEYVQVLRDLWGSGKSDFKGDFFTMDDCRVSPQPSVPMKVICAGQSDAGMAFSARYADFNFCFGKGVNTPTAFAPTAARMKQAAEQTGRDVGSYVLFMVIADETDDAARAKWEHYKAGADEEALSWLTEQSQKDTRSGTDTNVRQMADPTSAVNINMGTLVGSYASVARMLDEVASVPGAEGVLLTFDDFLSGIETFGERIQPLMQCRAHLPALTQEVA
>NZ_CP051749.1|WP_000191701.1|3181137_3181776_-|HTH-type-transcriptional-regulator-RutR
MTQGAVKTTGKRSRAVSAKKKAILSAALDTFSQFGFHGTRLEQIAELAGVSKTNLLYYFPSKEALYIAVLRQILDIWLAPLKAFREDFAPLAAIKEYIRLKLEVSRDYPQASRLFCMEMLAGAPLLMDELTGDLKALIDEKSALIAGWVKSGKLAPIDPQHLIFMIWASTQHYADFAPQVEAVTGATLRDEVFFNQTVENVQRIIIEGIRPR
>NZ_CP051749.1|WP_001550940.1|3177135_3181098_+|trifunctional-transcriptional-regulator/proline-dehydrogenase/L-glutamate-gamma-semialdehyde-dehydrogenase
MGTTTMGVKLDDATRERIKSAATRIDRTPHWLIKQAIFSYLEQLENSDTLPELPALLSGAANESDEAPTPAEEPHQPFLDFAEQILPQSVSRAAITAAYRRPETEAVSMLLEQARLPQPIAEQAHKLAYQLADKLRNQKNASGRAGMVQGLLQEFSLSSQEGVALMCLAEALLRIPDKATRDALIRDKISNGNWQSHIGRSPSLFVNAATWGLLFTGKLVSTHNEASLSRSLNRIIGKSGEPLIRKGVDMAMRLMGEQFVTGETIAEALANARKLEEKGFRYSYDMLGEAALTAADAQAYMVSYQQAIHAIGKASNGRGIYEGPGISIKLSALHPRYSRAQYDRVMEELYPRLKSLTLLARQYDIGINIDAEEADRLEISLDLLEKLCFEPELAGWNGIGFVIQAYQKRCPLVIDYLIDLATRSRRRLMIRLVKGAYWDSEIKRAQMDGLEGYPVYTRKVYTDVSYLACAKKLLAVPNLIYPQFATHNAHTLAAIYQLAGQNYYPGQYEFQCLHGMGEPLYEQVTGKVADGKLNRPCRIYAPVGTHETLLAYLVRRLLENGANTSFVNRIADTSLPLDELVADPVTAVEKLAQQEGQTGLPHPKIPLPRDLYGHGRDNSAGLDLANEHRLASLSSALLNSALQKWQALPMLEQSVAAGEMSPVINPAEPKDIVGFVREATPREVEQALESAVNNAPIWFATPPAERAAILHRAAVLMESQMQQLIGILVREAGKTFSNAIAEVREAVDFLHYYAGQVRDDFANETHRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQGIAILLEAGVPPGVVQLLPGQGETVGAQLTGDDRVRGVMFTGSTEVATLLQRNIASRLDAQGRPIPLIAETGGMNAMIVDSSALTEQVVIDVLASAFDSAGQRCSALRVLCLQDEIADHTLKMLRGAMAECRMGNPGRLTTDIGPVIDSEAKANIERHIQTMRSKGRPVFQAVRENSEDAREWQSGTFVAPTLIELDDFAELQKEVFGPVLHVVRYNRNQLPELIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTGPKAGGPLYLYRLLANRPESALAVTLARQDAEYPVDAQLKAALTQPLNALREWAANRPELQALCTQYGELAQAGTQRLLPGPTGERNTWTLLPRERVLCIADDEQDALTQLAAVLAVGSQVLWPDDTLHRQLVKALPSAVSERIQLAKAENITAQPFDAVIFHGDSDQLRALCEAVAARDGAIVSVQGFARGESNILLERLYIERSLSVNTAAAGGNASLMTIG
>NZ_CP051749.1|WP_000979516.1|3176871_3177081_-|hypothetical-protein
MMLQLCATMLNVTCVASLKMNEMLIKEIDMTGIKKITQTFSLRQLTFLKGATAKNVRECNLMKNSVAEH
>NZ_CP051749.1|WP_001151437.1|3188135_3188732_+|NAD(P)H:quinone-oxidoreductase
MAKVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQTAPVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITSTWTTLAHHGMVIVPIGYAAQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG
>NZ_CP051749.1|WP_001143120.1|3188752_3188980_+|hypothetical-protein
MPTQEAKAHHVGEWASLRNTSPEIAEAIFEVAGYDEKMAEKIWEEGSDEVLVKAFAKTDKDSLFWGEQTIERKNV
>NZ_CP051749.1|WP_001044307.1|3189017_3190259_-|bifunctional-glucose-1-phosphatase/inositol-phosphatase
MNKTLIAATVAGIVLLASNAQAQTVPEGYQLQQVLMMSRHNLRAPLANNGSVLEQSTPNKWPEWDVPGGQLTTKGGVLEVYMGHYMREWLAEQGMVKSGECPPPDTVYAYANSLQRTVATAQFFITGAFPGCDIPVHHQEKMGTMDPTFNPVITDDSAAFSEQAVAAMEKELSKLQLTDSYQLLEKIVNYKDSPACKEKQQCSLVDGKNTFSAKYQQEPGVSGPLKVGNSLVDAFTLQYYEGFPMDQVAWGEIKSDQQWKVLSKLKNGYQDSLFTSPEVARNVAKPLVSYIDKALVTDRTSAPKITVLVGHDSNIASLLTALDFKPYQLHDQNERTPIGGKIVFQRWHDSKANRDLMKIEYVYQSAEQLRNADALTLQAPAQRVTLELSGCPIDANGFCPMDKFDSVLNEAVK
>NZ_CP051749.1|WP_000420641.1|3192068_3192989_+|curved-DNA-binding-protein
MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQMWQHRNDPQFSRQFQHGDGQSFNAEDFDDIFSSIFGQHARQSRQRPATRGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTLNVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPVSPWEAALGAKVTVPTLKESILLTIPPGSQAGQRLRVKGKGLVSKKQTGDLYAVLKIVMPPKPDENTAALWQQLADAQSSFDPRKDWGKA
>NZ_CP051749.1|WP_000024560.1|3192988_3193294_+|chaperone-modulator-CbpM
MANVTVTFTITEFCLHTGISEEELNEIVGLGVVEPREIQETTWVFDDHAAIVVQRAVRLRHELALDWPGIAVALTLMDDIAHLKQENRLLRQRLSRFVAHP
>NZ_CP051749.1|WP_001544437.1|3193445_3194045_-|molecular-chaperone-TorD
MTTLTAQQIACVYAWLAQLFSRELDDEQLTQIASAQMAEWFSLLKSEPPLTAAVNELENRIATLTVRDDARLELAADFCGLFLMTDKQAALPYASAYKQDEQEIKRLLVEAGMETSGNFNEPADHLAIYLELLSHLHFSLGEGTVPARRIDNLRQKTLTALRQWLPEFAARCHQYDSFGFYAALSQLLLVLVECDHQNR
>NZ_CP051749.1|WP_001550936.1|3194041_3196588_-|trimethylamine-N-oxide-reductase-TorA
MNNNDLFQASRRRFLAQLGGLTVAGMLGPSLLTPRRASAAQAATEAVTSKEGILTGSHWGAIRATVKEGRFVAAKPFELDKYSSKMIAGLPDHVHNAARIRYPMVRVDWLRKRHLSDTSQRGDNRFVRVSWDEALDMFYEELERVQKTHGPSALLTASGWQSTGMFHNASGMLAKAIALHGNSVGTGGDYSTGAAQVILPRVVGSMEVYEQQTSWPLVLQNSKTIVLWGSDLLKNQQANWWCPDHDVYEYYEQLKAKVAAGEIEVISIDPVVTSTHEYLGREHVKHIAVNPQTDVPLQLALAHTLYSENLYDKNFLANYCVGFEQFLPYLLGEKDGQPKDAAWAEKLTGIDAETIRGLARQMAANRTQIIAGWCVQRMQHGEQWAWMIVVLAAMLGQIGLPGGGFGFGWHYNGAGTPGRKGVILSGFSGSTSIPSVHDNSDYKGYSSTIPIARFIDAILEPGKVINWNGKSVKLPPLKMCIFAGTNPFHRHQQINRIIEGWRKLETVIAIDNQWTSTCRFADIVLPATTQFERNDLDQYGNHSNRGIIAMKQVVPPQFEARNDFDIFRELCRRFNREEAFTEGLDEMGWLKRIWQEGVQQGKGRGVHLPAFDDFWNNKEYVEFDHPQMFVRHQAFREDPDLEPLGTPSGLIEIYSKTIADMNYDDCQGHPMWFEKIERSHGGPGSQKYPLHLQSVHPDFRLHSQLCESETLRQQYTVAGKEPVFINPQDASARGIRNGDVVRVFNARGQVLAGAVVSDRYAPGVARIHEGAWYDPDKGGEPGALCKYGNPNVLTIDIGTSQLAQATSAHTTLVEIEKYNGTVEQVTAFNGPVEMVAQCEYVPASQVKS
>NZ_CP051749.1|WP_001550935.1|3196587_3197760_-|pentaheme-c-type-cytochrome-TorC
MRKLWNALRRPSARWSVLALVAIGIVIGIALIVLPHVGIKVTSTTEFCVSCHSMQPVYEEYKQSVHFQNASGVRAECHDCHIPPDIPGMVKRKLEASNDIYQTFIAHSIDTPEKFEAKRAELAEREWARMKENNSATCRSCHNYDAMDHAKQHPEAARQMKVAAKDNQSCIDCHKGIAHQLPDMSSGFRKQFDELRASANDSGDTLYSIDIKPIYAGKGDKEASGSLLPASEVKVLKRDGDWLQIEITGWTESAGRQRVLTQFPGKRIFVASIRGDVQQQVKTLEKTTVADTNTEWSKLQATAWMKKGDMVNDIKPIWAYADSLYNGTCNQCHGAPEISHFDANGWIGTLNGMIGFTSLDKREERTLLKYLQMNASDTAGKAHGDKKEEK
>NZ_CP051749.1|WP_001120121.1|3197889_3198582_+|two-component-system-response-regulator-TorR
MPHHIVIVEDEPVTQARLQSYFTQEGYTVSVTASGAGLREIMQNQPVDLILLDINLPDENGLMLTRALRERSTVGIILVTGRSDRIDRIVGLEMGADDYVTKPLELRELVVRVKNLLWRIDLTRQAQPHTQDNCYRFAGYCLNVSRHTLERDGEPIKLTRAEYEMLVAFVTNPGEILSRERLLRMLSARRVENPDLRTVDVLIRRLRHKLSADLLVTQHGEGYFLAADVC
>NZ_CP051749.1|WP_001550934.1|3198554_3199583_-|TMAO-reductase-system-periplasmic-protein-TorT
MRVLLLLLLSLFMLPGFSADNLLRWHDAQHFSVQASTPLKAKRAWKLCALYPSLKDSYWLSLNYGMQEAARRYGVDLKVLEAGGYSQLATQQAQIDQCKQWGAEAILLGSSTTSFPDLQKQVASLPVIELVNAIDAPHVKSRVGVPWFQMGYQPGRYLVQWSHGKPLNVLLMPGPDNAGGSKEMVEGFRAAIAGSPVRIVDIALGDNDIEIQRNLLQEMLERHPEIDVVAGTAIAAEAAMGEGRNLKTPLTVVSFYLSHQVYRGLKRGRVIMAASDQMVWQGELAVEQAIRQLQGQSVSDNVSPPILVLTPKNADREHIRRSLSPGGFRPVYFYQHTSAAKK

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Crispr_ID: NZ_CP051749_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP051749_5

4251845-4251976

Orphan

Consensus_repeat	Method
ATCACCAATATTGAAAAT	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP051749_5

>merge|NZ_CP051749|5|4251845-4251976|PILER-CR
ATCACCAATATTGAAAATGTCACACGCAGATAAATCCAACTTTCAATATTGTTAAGTCCCTCACCAATATTGAAAACACGGCGTAGCAAAGAAATTTTCAATATTGCTTTATGGATCACCAATATTGAAAGT

>NZ_CP051749|5|3|4251845-4251976|PILER-CR
ATCACCAATATTGAAAAT	GTCACACGCAGATAAATCCAACTTTCAATATTGTTAAGTCC
CTCACCAATATTGAAAAC	ACGGCGTAGCAAAGAAATTTTCAATATTGCTTTATGG
ATCACCAATATTGAAAGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP051749.1\|WP_000203741.1\|4248406_4248694_-\|ferredoxin-like-protein-FixX	unknown	unknown	gnl\|CDD\|185346
NZ_CP051749.1\|WP_000543604.1\|4264990_4265812_-\|4-hydroxy-tetrahydrodipicolinate-reductase	unknown	unknown	gnl\|CDD\|223366
NZ_CP051749.1\|WP_000600725.1\|4246378_4246909_-\|glutathione-regulated-potassium-efflux-system-oxidoreductase-KefF	unknown	unknown	gnl\|CDD\|234852
NZ_CP051749.1\|WP_000004399.1\|4257994_4258780_+\|crotonobetainyl-CoA-hydratase	unknown	unknown	gnl\|CDD\|179599
NZ_CP051749.1\|WP_001287746.1\|4248690_4249977_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|182273
NZ_CP051749.1\|WP_000377113.1\|4244523_4246386_-\|glutathione-regulated-potassium-efflux-system-protein-KefC	unknown	unknown	gnl\|CDD\|235131
NZ_CP051749.1\|WP_000624375.1\|4243852_4244332_-\|type-3-dihydrofolate-reductase	unknown	unknown	gnl\|CDD\|182714
NZ_CP051749.1\|WP_000125566.1\|4243533_4243767_-\|type-II-toxin-antitoxin-system-CcdA-family-antitoxin	unknown	unknown	gnl\|CDD\|227619
NZ_CP051749.1\|WP_000692217.1\|4250983_4251754_-\|electron-transfer-flavoprotein-FixA	unknown	unknown	gnl\|CDD\|179569
NZ_CP051749.1\|WP_000257196.1\|4242384_4243233_+\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	unknown	unknown	gnl\|CDD\|273208
NZ_CP051749.1\|WP_001550584.1\|4250027_4250969_-\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	unknown	unknown	gnl\|CDD\|235120
NZ_CP051749.1\|WP_001309938.1\|4256332_4257886_+\|crotonobetaine/carnitine-CoA-ligase	unknown	unknown	gnl\|CDD\|181195
NZ_CP051749.1\|WP_000347137.1\|4253770_4254913_+\|crotonobetainyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|179566
NZ_CP051749.1\|WP_001550585.1\|4247016_4248348_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340874
NZ_CP051749.1\|WP_000122882.1\|4258785_4259376_+\|carnitine-operon-protein-CaiE	unknown	unknown	gnl\|CDD\|184189
NZ_CP051749.1\|WP_001550582.1\|4260150_4263369_-\|carbamoyl-phosphate-synthase-large-subunit	unknown	unknown	gnl\|CDD\|235393
NZ_CP051749.1\|WP_000787109.1\|4252225_4253740_+\|L-carnitine/gamma-butyrobetaine-antiport-BCCT-transporter	unknown	unknown	gnl\|CDD\|179568
NZ_CP051749.1\|WP_000333124.1\|4259494_4259890_-\|carnitine-metabolism-transcriptional-regulator-CaiF	unknown	unknown	gnl\|CDD\|183154
NZ_CP051749.1\|WP_000349954.1\|4255041_4256259_+\|L-carnitine-CoA-transferase	unknown	unknown	gnl\|CDD\|179589
NZ_CP051749.1\|WP_001445800.1\|4263386_4264535_-\|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit	unknown	unknown	gnl\|CDD\|237139

Protein	Function_ID	Function_description	E-value
NZ_CP051749.1\|WP_000203741.1\|4248406_4248694_-\|ferredoxin-like-protein-FixX	gnl\|CDD\|185346	PRK15449, PRK15449, ferredoxin-like protein FixX; Provisional.	1.84173e-69
NZ_CP051749.1\|WP_000543604.1\|4264990_4265812_-\|4-hydroxy-tetrahydrodipicolinate-reductase	gnl\|CDD\|223366	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism].	8.28292e-142
NZ_CP051749.1\|WP_000600725.1\|4246378_4246909_-\|glutathione-regulated-potassium-efflux-system-oxidoreductase-KefF	gnl\|CDD\|234852	PRK00871, PRK00871, glutathione-regulated potassium-efflux system oxidoreductase KefF.	2.99389e-133
NZ_CP051749.1\|WP_000004399.1\|4257994_4258780_+\|crotonobetainyl-CoA-hydratase	gnl\|CDD\|179599	PRK03580, PRK03580, crotonobetainyl-CoA hydratase.	6.92249e-179
NZ_CP051749.1\|WP_001287746.1\|4248690_4249977_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|182273	PRK10157, PRK10157, putative oxidoreductase FixC; Provisional.	0
NZ_CP051749.1\|WP_000377113.1\|4244523_4246386_-\|glutathione-regulated-potassium-efflux-system-protein-KefC	gnl\|CDD\|235131	PRK03562, PRK03562, glutathione-regulated potassium-efflux system protein KefC; Provisional.	0
NZ_CP051749.1\|WP_000624375.1\|4243852_4244332_-\|type-3-dihydrofolate-reductase	gnl\|CDD\|182714	PRK10769, folA, type 3 dihydrofolate reductase.	1.07206e-127
NZ_CP051749.1\|WP_000125566.1\|4243533_4243767_-\|type-II-toxin-antitoxin-system-CcdA-family-antitoxin	gnl\|CDD\|227619	COG5302, COG5302, Post-segregation antitoxin (ccd killing mechanism protein) encoded by the F plasmid [General function prediction only].	2.77856e-23
NZ_CP051749.1\|WP_000692217.1\|4250983_4251754_-\|electron-transfer-flavoprotein-FixA	gnl\|CDD\|179569	PRK03359, PRK03359, putative electron transfer flavoprotein FixA; Reviewed.	2.42827e-170
NZ_CP051749.1\|WP_000257196.1\|4242384_4243233_+\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	gnl\|CDD\|273208	TIGR00668, Bis5'-nucleosyl-tetraphosphatase_symmetrical, bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Diadenosine 5',5"'-P1,P4-tetraphosphate (Ap4A) is a regulatory metabolite of stress conditions. It is hydrolyzed to two ADP by this enzyme. Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. [Cellular processes, Adaptations to atypical conditions].	0
NZ_CP051749.1\|WP_001550584.1\|4250027_4250969_-\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	gnl\|CDD\|235120	PRK03363, fixB, electron transfer flavoprotein subunit alpha/FixB family protein.	0
NZ_CP051749.1\|WP_001309938.1\|4256332_4257886_+\|crotonobetaine/carnitine-CoA-ligase	gnl\|CDD\|181195	PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated.	0
NZ_CP051749.1\|WP_000347137.1\|4253770_4254913_+\|crotonobetainyl-CoA-dehydrogenase	gnl\|CDD\|179566	PRK03354, PRK03354, crotonobetainyl-CoA dehydrogenase; Validated.	0
NZ_CP051749.1\|WP_001550585.1\|4247016_4248348_-\|MFS-transporter	gnl\|CDD\|340874	cd17316, MFS_SV2_like, Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily. This family is composed of metazoan synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters including those that transport inorganic phosphate (Pht), aromatic compounds (PcaK and related proteins), proline/betaine (ProP), alpha-ketoglutarate (KgtP), citrate (CitA), shikimate (ShiA), and cis,cis-muconate (MucK), among others. SV2 is a transporter-like protein that serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. Also included in this family is synaptic vesicle 2 (SV2)-related protein (SVOP) and similar proteins. SVOP is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. The SV2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.81159e-59
NZ_CP051749.1\|WP_000122882.1\|4258785_4259376_+\|carnitine-operon-protein-CaiE	gnl\|CDD\|184189	PRK13627, PRK13627, carnitine operon protein CaiE; Provisional.	4.35289e-143
NZ_CP051749.1\|WP_001550582.1\|4260150_4263369_-\|carbamoyl-phosphate-synthase-large-subunit	gnl\|CDD\|235393	PRK05294, carB, carbamoyl-phosphate synthase large subunit.	0
NZ_CP051749.1\|WP_000787109.1\|4252225_4253740_+\|L-carnitine/gamma-butyrobetaine-antiport-BCCT-transporter	gnl\|CDD\|179568	PRK03356, PRK03356, L-carnitine/gamma-butyrobetaine antiport BCCT transporter.	0
NZ_CP051749.1\|WP_000333124.1\|4259494_4259890_-\|carnitine-metabolism-transcriptional-regulator-CaiF	gnl\|CDD\|183154	PRK11476, PRK11476, carnitine metabolism transcriptional regulator CaiF.	2.21297e-74
NZ_CP051749.1\|WP_000349954.1\|4255041_4256259_+\|L-carnitine-CoA-transferase	gnl\|CDD\|179589	PRK03525, PRK03525, L-carnitine CoA-transferase.	0
NZ_CP051749.1\|WP_001445800.1\|4263386_4264535_-\|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit	gnl\|CDD\|237139	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit.	0

>NZ_CP051749.1|WP_000692217.1|4250983_4251754_-|electron-transfer-flavoprotein-FixA
MKIITCYKCVPDEQDIAVNNADGSLDFSKADAKISQYDLNAIEAACQLKQQAAEAQVTALSVGGKALTNAKGRKDVLSRGPDELIVVIDDQFEQALPQQTASVLAAAAQKAGFDLILCGDGSSDLYAQQVGLLVGEILNIPAVNGVSKIISLTADTLTVERELEDETETLSIPLPAVVAVSTDINSPQIPSMKAILGAAKKPVQVWSAADIGFNAEAAWSEQQVAAPKQRERQRIVIEGDGEEQIAAFAENLRKVI
>NZ_CP051749.1|WP_001550584.1|4250027_4250969_-|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein
MNTFSQVWVFSDTPSRLPELMNGAQALANQINAFVLNDADGAQAIQLGANHVWKLNGKPDDRMVEDYAGVMADTIRQHGADGLVLLPNTRRGKLLAAKLGYRLKAAVSNDASTVSVQDGKATVKHMVYGGLAIGEERIATPYAVLTISSGTFDAAQPDASRTGETHTVEWQAPAVAITRTATQARQSNSVDLDKARLVVSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEHERYVGISNLMLKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPALTAALAR
>NZ_CP051749.1|WP_001287746.1|4248690_4249977_-|FAD-dependent-oxidoreductase
MSEDIFDAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAGAKNVTGGRLYAHSLEHIIPGFAESAPVERLITHEKLAFMTEKSAMTMDYCNGDETSPSQRSYSVLRSKFDAWLMEQAEEAGAQLITGIRVDNLVQRDGKVVGVEADGDVIEAKTVILADGVNSILAEKLGMAKRVKPTDVAVGVKELIELPKSVIEDRFQLQGNQGAACLFAGSPTNGLMGGGFLYTNENTLSLGLVCGLHHLHDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEYSAHVVPEAGINMLPELVGDGVLIAGDAAGMCMNLGFTIRGMDLAIAAGEAAAKTVLSAMKSDDFSKQKLAEYRQHLESGPLRDMRMYQKLPAFLDNPRMFSGYPELAVGVARDLFTIDGSAPELMRKKILRHGKKVGFINLIKDGMKGVTVL
>NZ_CP051749.1|WP_000203741.1|4248406_4248694_-|ferredoxin-like-protein-FixX
MTSPVNVDVKLGVNKFNVDEEHPHIVVKADADKQALELLVKACPAGLYKKQDDGSVRFDYAGCLECGTCRILGLGSALEQWEYPRGTFGVEFRYG
>NZ_CP051749.1|WP_001550585.1|4247016_4248348_-|MFS-transporter
MQPSRNFDDLKFSSIHRRILLWGSGGPFLDGYVLVMIGVALEQLTPALKLDADWIGLLGAGTLAGLFVGTSLFGYISDKVGRRKMFLIDIIAIGVISVATMFVSSPVELLVMRVLIGIVIGADYPIATSMITEFSSTRQRAFSISFIAAMWYVGATCADLVGYWLYDVEGGWRWMLGSAAIPCLLILIGRFELPESPRWLLRKGRVKECEEMMSKLFGEPVAFDEEQPQQTRFRDLFNRRHFPFVLFVAAIWTCQVIPMFAIYTFGPQIVGLLGLGVGKNAALGNVVISLFFMLGCIPPMLWLNTAGRRPLLIGSFAMMTLALAVLGLIPDMGIWLVVMAFAVYAFFSGGPGNLQWLYPNELFPTDIRASAVGVIMSLSRIGTIVSTWALPIFINNYGISNTMLMGAGISLFGLLISVAFAPETRGMSLAQTSNMTIRGQRMG
>NZ_CP051749.1|WP_000600725.1|4246378_4246909_-|glutathione-regulated-potassium-efflux-system-oxidoreductase-KefF
MILIIYAHPYPHHSHANKRMLEQARTLEGVEIRSLYQLYPDFNIDIAAEQEALSRADLIVWQHPMQWYSIPPLLKLWIDKVFSHGWAYGHGGTALHGKHLLWAVTTGGGESHFEIGAHPGFDVLSQPLQATAIYCGLNWLPPFAMHCTFICDDETLEGQARHYKQRLLEWQEAHHG
>NZ_CP051749.1|WP_000377113.1|4244523_4246386_-|glutathione-regulated-potassium-efflux-system-protein-KefC
MDSHTLIQALIYLGSAALIVPIAVRLGLGSVLGYLIAGCIIGPWGLRLVTDAESILHFAEIGVVLMLFIIGLELDPQRLWKLRAAVFGGGALQMVICGGLLGLFCMLLGLRWQVAELIGMTLALSSTAIAMQAMNERNLMVTQMGRSAFAVLLFQDIAAIPLVAMIPLLAASSASTTMGAFALSALKVAGALVLVVLLGRYVTRPALRFVARSGLREVFSAVALFLVFGFGLLLEEVGLSMAMGAFLAGVLLASSEYRHALESDIEPFKGLLLGLFFIGVGMSIDFGTLIENPLRIVILLLGFLIIKIAMLWLIARPLQVPNKQRRWFAVLLGQGSEFAFVVFGAAQMANVLEPEWAKSLTLAVALSMAATPILLVILNRLEQSSSEEAREADEIDEEQPRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQTNLQLTEMVKEHFPHLQIIARARDVDHYIRLRQAGVEKPERETFEGALKTGRLALESLGLGPYEARERADVFRRFNIQMVEEMAMVENDTKARAAVYKRTSAMLSEIITEDREHLSLIQRHGWQGTEEGKHTGNMADEPETKPSS
>NZ_CP051749.1|WP_000624375.1|4243852_4244332_-|type-3-dihydrofolate-reductase
MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVIMGRHTWESIGRPLPGRKNIILSSQPGTDDRVTWVKSVDEAIAACGDVPEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSEFHDADAQNSHSYCFEILERR
>NZ_CP051749.1|WP_000125566.1|4243533_4243767_-|type-II-toxin-antitoxin-system-CcdA-family-antitoxin
MTAKRTTQSVTVTVDRELVNRARDAGLNMSATLTVALNAELKKHAATRWREENAEAIAALNQLADETGCFSDEYRSF
>NZ_CP051749.1|WP_000257196.1|4242384_4243233_+|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)
MATYLIGDVHGCYDELIALLHKVEFTPGKDTLWLTGDLVARGPGSLDVLRYVKSLGDSVRLVLGNHDLHLLAVFAGISRNKPKDRLTPLLEAPDADELLNWLRRQPLLQIDEEKKLVMAHAGITPQWDLQTAKECARDVEAVLSSDSYPFFLDAMYGDMPNNWSPELRGLGRLRFITNAFTRMRFCFPNGQLDMYSKESPEEAPAPLKPWFAIPGPVAEEYSIAFGHWASLEGKGTPEGIYALDTGCCWGGTLTCLRWEDKQYFVQPSNRHKDMGEGEAVAS
>NZ_CP051749.1|WP_000787109.1|4252225_4253740_+|L-carnitine/gamma-butyrobetaine-antiport-BCCT-transporter
MKNEKRKTGIEPKVFFPPLIIVGILCWLTVRDLDAANVVINAVFSYVTNVWGWAFEWYMVVMLFGWFWLVFGPYAKKRLGNEPPEFSTASWIFMMFASCTSAAVLFWGSIEIYYYISTPPFGLEPNSTGAKELGLAYSLFHWGPLPWATYSFLSVAFAYFFFVRKMEVIRPSSTLVPLVGEKHAKGLFGTIVDNFYLVALIFAMGTSLGLATPLVTECMQWLFGIPHTLQLDAIIITCWIILNAICVACGLQKGVRIASDVRSYLSFLMLGWVFIVSGASFIMNYFTDSVGMLLMYLPRMLFYTDPIAKGGFPQGWTVFYWAWWVIYAIQMSIFLARISRGRTVRELCFGMVLGLTASTWILWTVLGSNTLLLMDKNIINIPNLIEQYGVARAIIETWAALPLSTATMWGFFILCFIATVTLVNACSYTLAMSTCREVRDGEEPPLLVRIGWSILVGIIGIVLLALGGLKPIQTAIIAGGCPLFFVNIMVTLSFIKDAKQNWKD
>NZ_CP051749.1|WP_000347137.1|4253770_4254913_+|crotonobetainyl-CoA-dehydrogenase
MDFNLNDEQELFVAGIRELMASENWEAYFAECDRDSVYPERFVKALADMGIDSLLLPEEHGGLDAGFVTLAAVWMELGRLGAPTYVLYQLPGGFNTFLREGTQEQIDKIMAFRGTGKQMWNSAITEPGAGSDVGSLKTTYTRRNGKIYLNGSKCFITSSAYTPYIVVMARDGASPDKPVYTEWFVDMSKPGIKVTKLEKLGLRMDSCCEITFDDVELDEKDMFGREGNGFNRVKEEFDHERFLVALTNYGTAMCAFEDAARYANQRVQFGEAIGRFQLIQEKFAHMAIKLNSMKNMLYEAAWKADNGTITSGDAAMCKYFCANAAFEVVDSAMQVLGGVGIAGNHRISRFWRDLRVDRVSGGSDEMQILTLGRAVLKQYR
>NZ_CP051749.1|WP_000349954.1|4255041_4256259_+|L-carnitine-CoA-transferase
MDHLPMPKFGPLAGLRVVFSGIEIAGPFAGQMFAEWGAEVIWIENVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFLKLMETTDIFIEASKGPAFARRGITDEVLWQHNPKLVIAHLSGFGQYGTEEYTNLPAYNTIAQAFSGYLIQNGDVDQPMPAFPYTADYFSGLTATTAALAALHKVRETGKGESIDIAMYEVMLRMGQYFMMDYFNGGEMCPRMTKGKDPYYAGCGLYKCADGYIVMELVGITQIEECFKDIGLAHLLGTSEIPEGTQLIHRIECPYGPLVEEKLDAWLAAHTIAEVKERFAELNIACAKVLTVPELESNPQYVARESITQWQTMDGRTCKGPNIMPKFKNNPGKIWRGMPSHGMDTAAILKNIGYSENDIQELVSKGLAKVED
>NZ_CP051749.1|WP_001309938.1|4256332_4257886_+|crotonobetaine/carnitine-CoA-ligase
MDIIGGQHLRQMWDDLADVYGHKTALICESSSGVVNRYSYLELNQEINRTANLFYTLGIRKGDKVALHLDNCPEFIFCWFGLAKIGAIMVPINARLLREESAWILQNSQACLLVTSAQFYPMYQQIQQEDASQLRHICLIDMALPADDGVSSFTQLKNQQPATLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCALRDDDVYLTVMPAFHIDCQCTAAMAAFSAGATFVLVEKYSARAFWGQVQKYRATITECIPMMIRTLMVQPPSANDRQHCLREVMFYLNLSEQEKDAFCERFSVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRAGFCYEAEIRDDHNRPLPAGELGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYRDEEGFFYFVDRRCNMIKRGGENVSCVELENIIAAHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK
>NZ_CP051749.1|WP_000004399.1|4257994_4258780_+|crotonobetainyl-CoA-hydratase
MSESLHLTRNGSILEITLDRPKANAIDAKTSFEMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLKAAAEGEAPDADFGPGGFAGLTEIFNLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKILPPAIVNEMVMTGRRMGAEEALRWGVVNRVVSQAELMDNARELAQQLVNSAPLAIAALKEIYRTTSEMPVEEAYRYIRSGVLKHYPSVLHSEDAIEGPLAFAEKRDPVWKGR
>NZ_CP051749.1|WP_000122882.1|4258785_4259376_+|carnitine-operon-protein-CaiE
MSYYAFEGLIPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDTDTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFRGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHASLHETQPLRQMEENRPRLQGTTDVTPKR
>NZ_CP051749.1|WP_000333124.1|4259494_4259890_-|carnitine-metabolism-transcriptional-regulator-CaiF
MCEGYVEKPLYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNTLTYILSEVTEISCEVKMIPNKLEGRGCQCQRLVKVVDIDEQIYARLRNNSRDKLVGVRKTPRIPAVPLTELNREQKWQMMLSKSMRR
>NZ_CP051749.1|WP_001550582.1|4260150_4263369_-|carbamoyl-phosphate-synthase-large-subunit
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNADFLRQLKRKGFADARLAKLAGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECESNPSDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTTIEMAVEKAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKTLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATDKVISVQEMHAQIK
>NZ_CP051749.1|WP_001445800.1|4263386_4264535_-|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit
MIKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAETYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTAK
>NZ_CP051749.1|WP_000543604.1|4264990_4265812_-|4-hydroxy-tetrahydrodipicolinate-reductase
MHDANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFTRPEGTLNHLAFCRQHGKGMVIGTTGFDEAGKQAIRDAAADIAIVFAANFSVGVNVMLKLLEKAAKVMGDYTDIEIIEAHHRHKVDAPSGTALAMGEAIAHALDKDLKDCAVYSREGHTGERVPGTIGFATVRAGDIVGEHTAMFADIGERLEITHKASSRMTFANGAVRSALWLSGKESGLFDMRDVLDLNNL

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP051749_1	1.1\|846212\|32\|NZ_CP051749\|PILER-CR,CRISPRCasFinder,CRT	846212-846243	32	LC542972	Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence	246876-246907	0	1.0
NZ_CP051749_1	1.2\|846273\|32\|NZ_CP051749\|PILER-CR,CRISPRCasFinder,CRT	846273-846304	32	LC542972	Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence	246815-246846	0	1.0
NZ_CP051749_1	1.3\|846334\|32\|NZ_CP051749\|PILER-CR,CRISPRCasFinder,CRT	846334-846365	32	LC542972	Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence	246754-246785	0	1.0
NZ_CP051749_1	1.4\|846395\|32\|NZ_CP051749\|PILER-CR,CRISPRCasFinder,CRT	846395-846426	32	LC542972	Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence	246693-246724	0	1.0
NZ_CP051749_1	1.5\|846456\|32\|NZ_CP051749\|PILER-CR,CRISPRCasFinder,CRT	846456-846487	32	LC542972	Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence	246632-246663	0	1.0
NZ_CP051749_1	1.6\|846517\|32\|NZ_CP051749\|PILER-CR,CRISPRCasFinder,CRT	846517-846548	32	LC542972	Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence	246571-246602	0	1.0
NZ_CP051749_1	1.7\|846578\|32\|NZ_CP051749\|PILER-CR,CRISPRCasFinder,CRT	846578-846609	32	LC542972	Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence	246510-246541	0	1.0
NZ_CP051749_1	1.8\|846639\|32\|NZ_CP051749\|PILER-CR,CRISPRCasFinder,CRT	846639-846670	32	LC542972	Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence	246449-246480	0	1.0
NZ_CP051749_1	1.9\|846700\|32\|NZ_CP051749\|PILER-CR,CRISPRCasFinder,CRT	846700-846731	32	LC542972	Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence	246388-246419	0	1.0
NZ_CP051749_2	2.14\|874786\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874786-874817	32	NZ_CP048306	Escherichia coli strain 9 plasmid p009_B, complete sequence	85745-85776	0	1.0
NZ_CP051749_2	2.14\|874786\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874786-874817	32	NZ_CP025883	Escherichia coli strain 503440 plasmid p503440_100, complete sequence	74209-74240	1	0.969
NZ_CP051749_2	2.14\|874786\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874786-874817	32	NZ_CP025894	Escherichia coli strain 503025 plasmid p503025_100, complete sequence	77020-77051	1	0.969
NZ_CP051749_2	2.14\|874786\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874786-874817	32	NZ_CP025868	Escherichia coli strain 504211 plasmid p504211_100, complete sequence	18988-19019	1	0.969
NZ_CP051749_2	2.14\|874786\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874786-874817	32	CP043018	Escherichia coli strain 388808_gen plasmid unnamed3, complete sequence	7820-7851	1	0.969
NZ_CP051749_2	2.14\|874786\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874786-874817	32	NZ_CP023851	Escherichia coli strain 4/0 plasmid p4_0.2, complete sequence	85863-85894	1	0.969
NZ_CP051749_2	2.14\|874786\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874786-874817	32	NZ_AP017612	Escherichia coli strain 20Ec-P-124 plasmid pMRY16-002_2, complete sequence	84770-84801	1	0.969
NZ_CP051749_2	2.14\|874786\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874786-874817	32	NZ_CP025870	Escherichia coli strain 503829 plasmid p503829_100, complete sequence	91177-91208	1	0.969
NZ_CP051749_2	2.14\|874786\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874786-874817	32	NZ_CP028430	Escherichia coli strain RM9131 plasmid pRM9131-1, complete sequence	36203-36234	1	0.969
NZ_CP051749_2	2.14\|874786\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874786-874817	32	NZ_CP053233	Escherichia coli strain SCU-306 plasmid pSCU-306-2, complete sequence	88329-88360	1	0.969
NZ_CP051749_2	2.14\|874786\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874786-874817	32	NZ_CP019013	Escherichia coli strain Ecol_AZ162 plasmid pECAZ162_2, complete sequence	33813-33844	1	0.969
NZ_CP051749_2	2.14\|874786\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874786-874817	32	CP025897	Escherichia coli strain 500465 plasmid p500465_152, complete sequence	147147-147178	1	0.969
NZ_CP051749_2	2.14\|874786\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874786-874817	32	NZ_CP019027	Escherichia coli strain Ecol_881 plasmid pEC881_2, complete sequence	57925-57956	1	0.969
NZ_CP051749_2	2.14\|874786\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874786-874817	32	NZ_CP019002	Escherichia coli strain Ecol_AZ155 plasmid pECAZ155_2, complete sequence	69838-69869	1	0.969
NZ_CP051749_2	2.14\|874786\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874786-874817	32	NZ_CP028433	Escherichia coli strain RM9975 plasmid pRM9975-1, complete sequence	94312-94343	1	0.969
NZ_CP051749_2	2.14\|874786\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874786-874817	32	NZ_CP012114	Escherichia coli strain PSUO78 plasmid pPSUO78_2, complete sequence	89288-89319	1	0.969
NZ_CP051749_2	2.14\|874786\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874786-874817	32	MK972693	Salmonella phage SI23, complete genome	20077-20108	1	0.969
NZ_CP051749_2	2.14\|874786\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874786-874817	32	MK770415	Salmonella phage SF11, complete genome	1521-1552	1	0.969
NZ_CP051749_2	2.14\|874786\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874786-874817	32	MK972694	Salmonella phage SE22, complete genome	41165-41196	1	0.969
NZ_CP051749_2	2.14\|874786\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874786-874817	32	MK770414	Salmonella phage SE16, complete genome	5417-5448	1	0.969
NZ_CP051749_2	2.14\|874786\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874786-874817	32	MK972686	Salmonella phage SF3, complete genome	24871-24902	1	0.969
NZ_CP051749_2	2.14\|874786\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874786-874817	32	MK972685	Salmonella phage SE10, complete genome	26090-26121	1	0.969
NZ_CP051749_2	2.14\|874786\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874786-874817	32	MK972687	Salmonella phage SE1 (in:P22virus), complete genome	16364-16395	1	0.969
NZ_CP051749_2	2.14\|874786\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874786-874817	32	MT740315	Escherichia phage JEP4, complete genome	24063-24094	1	0.969
NZ_CP051749_2	2.14\|874786\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874786-874817	32	MK972692	Salmonella phage SE21, complete genome	40301-40332	1	0.969
NZ_CP051749_2	2.14\|874786\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874786-874817	32	MF356679	Escherichia phage D6, complete genome	78029-78060	1	0.969
NZ_CP051749_4	4.1\|3187647\|40\|NZ_CP051749\|CRISPRCasFinder	3187647-3187686	40	NZ_CP041417	Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence	47951-47990	1	0.975
NZ_CP051749_5	5.1\|4251863\|41\|NZ_CP051749\|PILER-CR	4251863-4251903	41	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	141085-141125	1	0.976
NZ_CP051749_2	2.2\|874054\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874054-874085	32	KT898133	Aeromonas phage phiARM81ld, complete genome	45655-45686	2	0.938
NZ_CP051749_2	2.10\|874542\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874542-874573	32	NZ_CP021720	Escherichia coli strain AR_0128 plasmid tig00000793, complete sequence	108177-108208	2	0.938
NZ_CP051749_2	2.10\|874542\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874542-874573	32	NZ_CP020051	Escherichia coli strain AR_0118 plasmid unitig_3, complete sequence	58915-58946	2	0.938
NZ_CP051749_2	2.10\|874542\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874542-874573	32	KP869108	Escherichia coli O157 typing phage 10, complete genome	36668-36699	2	0.938
NZ_CP051749_2	2.10\|874542\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874542-874573	32	KP869107	Escherichia coli O157 typing phage 9, partial genome	36792-36823	2	0.938
NZ_CP051749_2	2.10\|874542\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874542-874573	32	NC_019711	Enterobacteria phage HK629, complete genome	30059-30090	2	0.938
NZ_CP051749_2	2.10\|874542\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874542-874573	32	NC_007804	Escherichia phage phiV10, complete genome	36258-36289	2	0.938
NZ_CP051749_2	2.10\|874542\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874542-874573	32	DQ126339	Enterobacteria phage phiV10, complete genome	36258-36289	2	0.938
NZ_CP051749_2	2.10\|874542\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874542-874573	32	MT225100	Escherichia phage Lys8385Vzw, complete genome	29553-29584	2	0.938
NZ_CP051749_3	3.1\|2431523\|38\|NZ_CP051749\|CRISPRCasFinder	2431523-2431560	38	NZ_CP043437	Enterobacter sp. LU1 plasmid unnamed	113727-113764	2	0.947
NZ_CP051749_5	5.2\|4251922\|37\|NZ_CP051749\|PILER-CR	4251922-4251958	37	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	141028-141064	3	0.919
NZ_CP051749_1	1.6\|846517\|32\|NZ_CP051749\|PILER-CR,CRISPRCasFinder,CRT	846517-846548	32	MN855767	Bacteriophage sp. isolate 11, complete genome	31880-31911	5	0.844
NZ_CP051749_1	1.2\|846273\|32\|NZ_CP051749\|PILER-CR,CRISPRCasFinder,CRT	846273-846304	32	NZ_CP045381	Labrenzia sp. THAF35 plasmid pTHAF35_a, complete sequence	394835-394866	6	0.812
NZ_CP051749_1	1.2\|846273\|32\|NZ_CP051749\|PILER-CR,CRISPRCasFinder,CRT	846273-846304	32	NZ_CP019631	Labrenzia aggregata strain RMAR6-6 plasmid unnamed1, complete sequence	62722-62753	6	0.812
NZ_CP051749_1	1.4\|846395\|32\|NZ_CP051749\|PILER-CR,CRISPRCasFinder,CRT	846395-846426	32	NC_013855	Azospirillum sp. B510 plasmid pAB510a, complete sequence	100800-100831	6	0.812
NZ_CP051749_2	2.9\|874481\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874481-874512	32	NZ_CP006570	Sodalis praecaptivus strain HS1 plasmid pHS1, complete sequence	200247-200278	6	0.812
NZ_CP051749_2	2.12\|874664\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874664-874695	32	NC_016040	Sulfobacillus thermotolerans strain Y0017 plasmid pY0017, complete sequence	37866-37897	6	0.812
NZ_CP051749_1	1.2\|846273\|32\|NZ_CP051749\|PILER-CR,CRISPRCasFinder,CRT	846273-846304	32	NZ_CP050254	Orbus sp. IPMB12 plasmid pIPMB12, complete sequence	17842-17873	7	0.781
NZ_CP051749_1	1.6\|846517\|32\|NZ_CP051749\|PILER-CR,CRISPRCasFinder,CRT	846517-846548	32	NZ_AP017656	Sphingobium cloacae strain JCM 10874 plasmid pSCLO_2, complete sequence	103191-103222	7	0.781
NZ_CP051749_1	1.9\|846700\|32\|NZ_CP051749\|PILER-CR,CRISPRCasFinder,CRT	846700-846731	32	NZ_CP036405	Komagataeibacter saccharivorans strain JH1 plasmid p221732, complete sequence	83754-83785	7	0.781
NZ_CP051749_1	1.9\|846700\|32\|NZ_CP051749\|PILER-CR,CRISPRCasFinder,CRT	846700-846731	32	NZ_CP023037	Komagataeibacter saccharivorans strain CV1 plasmid unnamed1, complete sequence	128632-128663	7	0.781
NZ_CP051749_2	2.9\|874481\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874481-874512	32	NZ_CP047145	Streptomyces sp. HF10 plasmid plas1, complete sequence	69691-69722	7	0.781
NZ_CP051749_1	1.4\|846395\|32\|NZ_CP051749\|PILER-CR,CRISPRCasFinder,CRT	846395-846426	32	NZ_CP016821	Rhodococcus sp. p52 plasmid pDF01, complete sequence	123752-123783	8	0.75
NZ_CP051749_1	1.4\|846395\|32\|NZ_CP051749\|PILER-CR,CRISPRCasFinder,CRT	846395-846426	32	NZ_CP016821	Rhodococcus sp. p52 plasmid pDF01, complete sequence	136491-136522	8	0.75
NZ_CP051749_1	1.10\|846761\|32\|NZ_CP051749\|PILER-CR,CRISPRCasFinder,CRT	846761-846792	32	MG925351	Mycobacterium phage MPlant7149, complete genome	32515-32546	8	0.75
NZ_CP051749_2	2.2\|874054\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874054-874085	32	MN901520	Halorubrum coriense virus Hardycor2, complete genome	16524-16555	8	0.75
NZ_CP051749_2	2.9\|874481\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874481-874512	32	NZ_AP017656	Sphingobium cloacae strain JCM 10874 plasmid pSCLO_2, complete sequence	234032-234063	8	0.75
NZ_CP051749_2	2.9\|874481\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874481-874512	32	NZ_CP011450	Sphingomonas sanxanigenens DSM 19645 = NX02 plasmid pNXO2, complete sequence	59722-59753	8	0.75
NZ_CP051749_2	2.11\|874603\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874603-874634	32	MN855878	Bacteriophage sp. isolate 336, complete genome	5171-5202	8	0.75
NZ_CP051749_2	2.14\|874786\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874786-874817	32	MK820013	Vibrio phage vB_VpaP_MGD2, complete genome	24310-24341	8	0.75
NZ_CP051749_1	1.5\|846456\|32\|NZ_CP051749\|PILER-CR,CRISPRCasFinder,CRT	846456-846487	32	NZ_CP020900	Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRphaBra5d, complete sequence	178777-178808	9	0.719
NZ_CP051749_1	1.5\|846456\|32\|NZ_CP051749\|PILER-CR,CRISPRCasFinder,CRT	846456-846487	32	NZ_CP013589	Rhizobium phaseoli strain N161 plasmid pRphaN161d, complete sequence	251306-251337	9	0.719
NZ_CP051749_1	1.5\|846456\|32\|NZ_CP051749\|PILER-CR,CRISPRCasFinder,CRT	846456-846487	32	NZ_CP013562	Rhizobium phaseoli strain N841 plasmid pRphaN841e, complete sequence	256809-256840	9	0.719
NZ_CP051749_1	1.5\|846456\|32\|NZ_CP051749\|PILER-CR,CRISPRCasFinder,CRT	846456-846487	32	NZ_CP013536	Rhizobium phaseoli strain R650 plasmid pRphaR650d, complete sequence	653047-653078	9	0.719
NZ_CP051749_1	1.5\|846456\|32\|NZ_CP051749\|PILER-CR,CRISPRCasFinder,CRT	846456-846487	32	NZ_CP013546	Rhizobium phaseoli strain R620 plasmid pRphaR620d, complete sequence	259879-259910	9	0.719
NZ_CP051749_1	1.5\|846456\|32\|NZ_CP051749\|PILER-CR,CRISPRCasFinder,CRT	846456-846487	32	NC_010997	Rhizobium etli CIAT 652 plasmid pC, complete sequence	248019-248050	9	0.719
NZ_CP051749_1	1.9\|846700\|32\|NZ_CP051749\|PILER-CR,CRISPRCasFinder,CRT	846700-846731	32	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	2552746-2552777	9	0.719
NZ_CP051749_2	2.9\|874481\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874481-874512	32	NZ_CP011515	Mitsuaria sp. 7 plasmid, complete sequence	162356-162387	9	0.719
NZ_CP051749_2	2.13\|874725\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874725-874756	32	MN340231	Escherichia phage phiv205-1, complete genome	16237-16268	9	0.719
NZ_CP051749_2	2.13\|874725\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874725-874756	32	CP000711	Enterobacteria phage CUS-3, complete genome	12689-12720	9	0.719
NZ_CP051749_2	2.13\|874725\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874725-874756	32	MH717096	Escherichia phage N7, complete genome	9978-10009	9	0.719
NZ_CP051749_2	2.5\|874237\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874237-874268	32	NZ_CP022775	Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence	1222563-1222594	10	0.688
NZ_CP051749_2	2.5\|874237\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874237-874268	32	NZ_CP022762	Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence	1140926-1140957	10	0.688
NZ_CP051749_2	2.5\|874237\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874237-874268	32	NZ_CP023017	Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence	1200643-1200674	10	0.688
NZ_CP051749_2	2.5\|874237\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874237-874268	32	NZ_CP014703	Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence	1140023-1140054	10	0.688
NZ_CP051749_2	2.5\|874237\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874237-874268	32	NZ_CP022771	Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence	1140918-1140949	10	0.688
NZ_CP051749_2	2.5\|874237\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874237-874268	32	NZ_CP022777	Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence	1140274-1140305	10	0.688
NZ_CP051749_2	2.5\|874237\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874237-874268	32	NZ_CP022799	Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence	1140909-1140940	10	0.688
NZ_CP051749_2	2.5\|874237\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874237-874268	32	NZ_CP022764	Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence	1222678-1222709	10	0.688
NZ_CP051749_2	2.5\|874237\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874237-874268	32	NZ_CP022797	Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence	1222662-1222693	10	0.688
NZ_CP051749_2	2.5\|874237\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874237-874268	32	NZ_CP022758	Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence	1222655-1222686	10	0.688
NZ_CP051749_2	2.8\|874420\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874420-874451	32	MN693290	Marine virus AFVG_25M557, complete genome	19244-19275	10	0.688
NZ_CP051749_2	2.8\|874420\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874420-874451	32	MN693243	Marine virus AFVG_25M556, complete genome	14971-15002	10	0.688
NZ_CP051749_2	2.9\|874481\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874481-874512	32	MN850587	Escherichia phage mistaenkt, complete genome	62540-62571	10	0.688
NZ_CP051749_2	2.9\|874481\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874481-874512	32	MH791400	UNVERIFIED: Escherichia phage EcSzw-2, complete genome	63164-63195	10	0.688
NZ_CP051749_2	2.9\|874481\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874481-874512	32	MK562504	Enterobacteria phage CHB7, complete genome	51394-51425	10	0.688
NZ_CP051749_2	2.9\|874481\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874481-874512	32	NC_028808	Escherichia phage SUSP1, complete genome	60791-60822	10	0.688
NZ_CP051749_2	2.9\|874481\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874481-874512	32	MH791413	UNVERIFIED: Escherichia phage EcSzw_1, complete genome	62597-62628	10	0.688
NZ_CP051749_2	2.9\|874481\|32\|NZ_CP051749\|CRISPRCasFinder,CRT,PILER-CR	874481-874512	32	NC_028935	Escherichia phage SUSP2, complete genome	58756-58787	10	0.688
NZ_CP051749_1	1.2\|846273\|32\|NZ_CP051749\|PILER-CR,CRISPRCasFinder,CRT	846273-846304	32	NC_013449	Streptomyces sp. W9 plasmid pCQ3, complete sequence	5026-5057	11	0.656
NZ_CP051749_1	1.2\|846273\|32\|NZ_CP051749\|PILER-CR,CRISPRCasFinder,CRT	846273-846304	32	NC_019307	Streptomyces sp. W75 plasmid pCQ4, complete sequence	11401-11432	11	0.656

1. spacer 1.1|846212|32|NZ_CP051749|PILER-CR,CRISPRCasFinder,CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

ggctttaaccacacgagcaagtccttcgctgg	CRISPR spacer
ggctttaaccacacgagcaagtccttcgctgg	Protospacer
********************************

2. spacer 1.2|846273|32|NZ_CP051749|PILER-CR,CRISPRCasFinder,CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

agttaacaacccgcgccgaacaagcccgacaa	CRISPR spacer
agttaacaacccgcgccgaacaagcccgacaa	Protospacer
********************************

3. spacer 1.3|846334|32|NZ_CP051749|PILER-CR,CRISPRCasFinder,CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

tcgcaccgcgttaatccggcagaaaaacaaca	CRISPR spacer
tcgcaccgcgttaatccggcagaaaaacaaca	Protospacer
********************************

4. spacer 1.4|846395|32|NZ_CP051749|PILER-CR,CRISPRCasFinder,CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

ccgacaatctccgcctccagtcggtcgacctg	CRISPR spacer
ccgacaatctccgcctccagtcggtcgacctg	Protospacer
********************************

5. spacer 1.5|846456|32|NZ_CP051749|PILER-CR,CRISPRCasFinder,CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

tgtgcccgactgcgtgccgcgtcgagcgcctg	CRISPR spacer
tgtgcccgactgcgtgccgcgtcgagcgcctg	Protospacer
********************************

6. spacer 1.6|846517|32|NZ_CP051749|PILER-CR,CRISPRCasFinder,CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

ttcgccgccatcatcctgtggtgccagttgac	CRISPR spacer
ttcgccgccatcatcctgtggtgccagttgac	Protospacer
********************************

7. spacer 1.7|846578|32|NZ_CP051749|PILER-CR,CRISPRCasFinder,CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

gcgcctcggttgtttagccatgctcagcccca	CRISPR spacer
gcgcctcggttgtttagccatgctcagcccca	Protospacer
********************************

8. spacer 1.8|846639|32|NZ_CP051749|PILER-CR,CRISPRCasFinder,CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

ctttccacccaggcactgatactccacataaa	CRISPR spacer
ctttccacccaggcactgatactccacataaa	Protospacer
********************************

9. spacer 1.9|846700|32|NZ_CP051749|PILER-CR,CRISPRCasFinder,CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

gatcgccgggcgcggttacccgctgcgaaaat	CRISPR spacer
gatcgccgggcgcggttacccgctgcgaaaat	Protospacer
********************************

10. spacer 2.14|874786|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP048306 (Escherichia coli strain 9 plasmid p009_B, complete sequence) position: , mismatch: 0, identity: 1.0

tgatgttcaagtgtgtatgcacactcagcaaa	CRISPR spacer
tgatgttcaagtgtgtatgcacactcagcaaa	Protospacer
********************************

11. spacer 2.14|874786|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025883 (Escherichia coli strain 503440 plasmid p503440_100, complete sequence) position: , mismatch: 1, identity: 0.969

tgatgttcaagtgtgtatgcacactcagcaaa	CRISPR spacer
tgatgttcaagtgtgtatgcacactccgcaaa	Protospacer
************************** *****

12. spacer 2.14|874786|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025894 (Escherichia coli strain 503025 plasmid p503025_100, complete sequence) position: , mismatch: 1, identity: 0.969

tgatgttcaagtgtgtatgcacactcagcaaa	CRISPR spacer
tgatgttcaagtgtgtatgcacactccgcaaa	Protospacer
************************** *****

13. spacer 2.14|874786|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025868 (Escherichia coli strain 504211 plasmid p504211_100, complete sequence) position: , mismatch: 1, identity: 0.969

tgatgttcaagtgtgtatgcacactcagcaaa	CRISPR spacer
tgatgttcaagtgtgtatgcacactccgcaaa	Protospacer
************************** *****

14. spacer 2.14|874786|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to CP043018 (Escherichia coli strain 388808_gen plasmid unnamed3, complete sequence) position: , mismatch: 1, identity: 0.969

tgatgttcaagtgtgtatgcacactcagcaaa	CRISPR spacer
tgatgttcaagtgtgtatgcgcactcagcaaa	Protospacer
********************.***********

15. spacer 2.14|874786|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023851 (Escherichia coli strain 4/0 plasmid p4_0.2, complete sequence) position: , mismatch: 1, identity: 0.969

tgatgttcaagtgtgtatgcacactcagcaaa	CRISPR spacer
tgatgttcaagtgtgtatgcacactccgcaaa	Protospacer
************************** *****

16. spacer 2.14|874786|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP017612 (Escherichia coli strain 20Ec-P-124 plasmid pMRY16-002_2, complete sequence) position: , mismatch: 1, identity: 0.969

tgatgttcaagtgtgtatgcacactcagcaaa	CRISPR spacer
tgatgttcaagtgtgtatgcgcactcagcaaa	Protospacer
********************.***********

17. spacer 2.14|874786|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025870 (Escherichia coli strain 503829 plasmid p503829_100, complete sequence) position: , mismatch: 1, identity: 0.969

tgatgttcaagtgtgtatgcacactcagcaaa	CRISPR spacer
tgatgttcaagtgtgtatgcacactccgcaaa	Protospacer
************************** *****

18. spacer 2.14|874786|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP028430 (Escherichia coli strain RM9131 plasmid pRM9131-1, complete sequence) position: , mismatch: 1, identity: 0.969

tgatgttcaagtgtgtatgcacactcagcaaa	CRISPR spacer
tgatgttcaagtgtgtatgcgcactcagcaaa	Protospacer
********************.***********

19. spacer 2.14|874786|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053233 (Escherichia coli strain SCU-306 plasmid pSCU-306-2, complete sequence) position: , mismatch: 1, identity: 0.969

tgatgttcaagtgtgtatgcacactcagcaaa	CRISPR spacer
tgatgttcaagtgtgtatgcgcactcagcaaa	Protospacer
********************.***********

20. spacer 2.14|874786|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019013 (Escherichia coli strain Ecol_AZ162 plasmid pECAZ162_2, complete sequence) position: , mismatch: 1, identity: 0.969

tgatgttcaagtgtgtatgcacactcagcaaa	CRISPR spacer
tgatgttcaagtgtgtatgcacactccgcaaa	Protospacer
************************** *****

21. spacer 2.14|874786|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to CP025897 (Escherichia coli strain 500465 plasmid p500465_152, complete sequence) position: , mismatch: 1, identity: 0.969

tgatgttcaagtgtgtatgcacactcagcaaa	CRISPR spacer
tgatgttcaagtgtgtatgcacactccgcaaa	Protospacer
************************** *****

22. spacer 2.14|874786|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019027 (Escherichia coli strain Ecol_881 plasmid pEC881_2, complete sequence) position: , mismatch: 1, identity: 0.969

tgatgttcaagtgtgtatgcacactcagcaaa	CRISPR spacer
tgatgttcaagtgtgtatgcacactccgcaaa	Protospacer
************************** *****

23. spacer 2.14|874786|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019002 (Escherichia coli strain Ecol_AZ155 plasmid pECAZ155_2, complete sequence) position: , mismatch: 1, identity: 0.969

tgatgttcaagtgtgtatgcacactcagcaaa	CRISPR spacer
tgatgttcaagtgtgtatgcgcactcagcaaa	Protospacer
********************.***********

24. spacer 2.14|874786|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP028433 (Escherichia coli strain RM9975 plasmid pRM9975-1, complete sequence) position: , mismatch: 1, identity: 0.969

tgatgttcaagtgtgtatgcacactcagcaaa	CRISPR spacer
tgatgttcaagtgtgtatgcgcactcagcaaa	Protospacer
********************.***********

25. spacer 2.14|874786|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012114 (Escherichia coli strain PSUO78 plasmid pPSUO78_2, complete sequence) position: , mismatch: 1, identity: 0.969

tgatgttcaagtgtgtatgcacactcagcaaa	CRISPR spacer
tgatgttcaagtgtgtatgcacactccgcaaa	Protospacer
************************** *****

26. spacer 2.14|874786|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to MK972693 (Salmonella phage SI23, complete genome) position: , mismatch: 1, identity: 0.969

tgatgttcaagtgtgtatgcacactcagcaaa	CRISPR spacer
tgatgttcaagtgtgtatgcacactccgcaaa	Protospacer
************************** *****

27. spacer 2.14|874786|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to MK770415 (Salmonella phage SF11, complete genome) position: , mismatch: 1, identity: 0.969

tgatgttcaagtgtgtatgcacactcagcaaa	CRISPR spacer
tgatgttcaagtgtgtatgcacactccgcaaa	Protospacer
************************** *****

28. spacer 2.14|874786|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to MK972694 (Salmonella phage SE22, complete genome) position: , mismatch: 1, identity: 0.969

tgatgttcaagtgtgtatgcacactcagcaaa	CRISPR spacer
tgatgttcaagtgtgtatgcacactccgcaaa	Protospacer
************************** *****

29. spacer 2.14|874786|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to MK770414 (Salmonella phage SE16, complete genome) position: , mismatch: 1, identity: 0.969

tgatgttcaagtgtgtatgcacactcagcaaa	CRISPR spacer
tgatgttcaagtgtgtatgcacactccgcaaa	Protospacer
************************** *****

30. spacer 2.14|874786|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to MK972686 (Salmonella phage SF3, complete genome) position: , mismatch: 1, identity: 0.969

tgatgttcaagtgtgtatgcacactcagcaaa	CRISPR spacer
tgatgttcaagtgtgtatgcacactccgcaaa	Protospacer
************************** *****

31. spacer 2.14|874786|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to MK972685 (Salmonella phage SE10, complete genome) position: , mismatch: 1, identity: 0.969

tgatgttcaagtgtgtatgcacactcagcaaa	CRISPR spacer
tgatgttcaagtgtgtatgcacactccgcaaa	Protospacer
************************** *****

32. spacer 2.14|874786|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to MK972687 (Salmonella phage SE1 (in:P22virus), complete genome) position: , mismatch: 1, identity: 0.969

tgatgttcaagtgtgtatgcacactcagcaaa	CRISPR spacer
tgatgttcaagtgtgtatgcacactccgcaaa	Protospacer
************************** *****

33. spacer 2.14|874786|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to MT740315 (Escherichia phage JEP4, complete genome) position: , mismatch: 1, identity: 0.969

tgatgttcaagtgtgtatgcacactcagcaaa	CRISPR spacer
tgatgttcaagtgtgtatgcacactccgcaaa	Protospacer
************************** *****

34. spacer 2.14|874786|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to MK972692 (Salmonella phage SE21, complete genome) position: , mismatch: 1, identity: 0.969

tgatgttcaagtgtgtatgcacactcagcaaa	CRISPR spacer
tgatgttcaagtgtgtatgcacactccgcaaa	Protospacer
************************** *****

35. spacer 2.14|874786|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to MF356679 (Escherichia phage D6, complete genome) position: , mismatch: 1, identity: 0.969

tgatgttcaagtgtgtatgcacactcagcaaa	CRISPR spacer
tgatgttcaagtgtgtatgcgcactcagcaaa	Protospacer
********************.***********

36. spacer 4.1|3187647|40|NZ_CP051749|CRISPRCasFinder matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 1, identity: 0.975

gcgctgcgggtcatttttgaaattacccccgctgtgctgt	CRISPR spacer
gcgctgcgggtcattcttgaaattacccccgctgtgctgt	Protospacer
***************.************************

37. spacer 5.1|4251863|41|NZ_CP051749|PILER-CR matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 1, identity: 0.976

gtcacacgcagataaatccaactttcaatattgttaagtcc	CRISPR spacer
gtcacacgcagataaatccaactttcaatattgttaagttc	Protospacer
***************************************.*

38. spacer 2.2|874054|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to KT898133 (Aeromonas phage phiARM81ld, complete genome) position: , mismatch: 2, identity: 0.938

acgaacgcggcacaccagggcgtctcatcgtc	CRISPR spacer
acgaacgcggcgcaccagggcgtctcgtcgtc	Protospacer
***********.**************.*****

39. spacer 2.10|874542|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021720 (Escherichia coli strain AR_0128 plasmid tig00000793, complete sequence) position: , mismatch: 2, identity: 0.938

agcacggcaggccatatgaaatacctgttgct	CRISPR spacer
agcacggcaggccatttgaaatacccgttgct	Protospacer
*************** *********.******

40. spacer 2.10|874542|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020051 (Escherichia coli strain AR_0118 plasmid unitig_3, complete sequence) position: , mismatch: 2, identity: 0.938

agcacggcaggccatatgaaatacctgttgct	CRISPR spacer
agcacggcaggccatttgaaatacccgttgct	Protospacer
*************** *********.******

41. spacer 2.10|874542|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to KP869108 (Escherichia coli O157 typing phage 10, complete genome) position: , mismatch: 2, identity: 0.938

agcacggcaggccatatgaaatacctgttgct	CRISPR spacer
agcacggcaggccatttgaaataccagttgct	Protospacer
*************** ********* ******

42. spacer 2.10|874542|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to KP869107 (Escherichia coli O157 typing phage 9, partial genome) position: , mismatch: 2, identity: 0.938

agcacggcaggccatatgaaatacctgttgct	CRISPR spacer
agcacggcaggccatttgaaataccagttgct	Protospacer
*************** ********* ******

43. spacer 2.10|874542|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to NC_019711 (Enterobacteria phage HK629, complete genome) position: , mismatch: 2, identity: 0.938

agcacggcaggccatatgaaatacctgttgct	CRISPR spacer
agcacggcaggccatttgaaataccagttgct	Protospacer
*************** ********* ******

44. spacer 2.10|874542|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to NC_007804 (Escherichia phage phiV10, complete genome) position: , mismatch: 2, identity: 0.938

agcacggcaggccatatgaaatacctgttgct	CRISPR spacer
agcacggcaggccatttgaaataccagttgct	Protospacer
*************** ********* ******

45. spacer 2.10|874542|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to DQ126339 (Enterobacteria phage phiV10, complete genome) position: , mismatch: 2, identity: 0.938

agcacggcaggccatatgaaatacctgttgct	CRISPR spacer
agcacggcaggccatttgaaataccagttgct	Protospacer
*************** ********* ******

46. spacer 2.10|874542|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to MT225100 (Escherichia phage Lys8385Vzw, complete genome) position: , mismatch: 2, identity: 0.938

agcacggcaggccatatgaaatacctgttgct	CRISPR spacer
agcacggcaggccatttgaaataccagttgct	Protospacer
*************** ********* ******

47. spacer 3.1|2431523|38|NZ_CP051749|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 2, identity: 0.947

cggacgcaggatggtgcgttcaattggactcgaaccaa	CRISPR spacer
cagacgcagaatggtgcgttcaattggactcgaaccaa	Protospacer
*.*******.****************************

48. spacer 5.2|4251922|37|NZ_CP051749|PILER-CR matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 3, identity: 0.919

acggcgtag--caaagaaattttcaatattgctttatgg	CRISPR spacer
--ggcgtagaaaaaagaaattttcaatattgctttatgg	Protospacer
  *******   ***************************

49. spacer 1.6|846517|32|NZ_CP051749|PILER-CR,CRISPRCasFinder,CRT matches to MN855767 (Bacteriophage sp. isolate 11, complete genome) position: , mismatch: 5, identity: 0.844

ttcgccgccatcatcctgtggtgccagttgac	CRISPR spacer
gaagccgccatcatcttgtggtgccagttaac	Protospacer
   ************.*************.**

50. spacer 1.2|846273|32|NZ_CP051749|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045381 (Labrenzia sp. THAF35 plasmid pTHAF35_a, complete sequence) position: , mismatch: 6, identity: 0.812

-agttaacaacccgcgccgaacaagcccgacaa	CRISPR spacer
tcgttga-agcccgcgccgaacatgaccgacaa	Protospacer
  ***.* *.************* * *******

51. spacer 1.2|846273|32|NZ_CP051749|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019631 (Labrenzia aggregata strain RMAR6-6 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

-agttaacaacccgcgccgaacaagcccgacaa	CRISPR spacer
tcgttga-agcccgcgccgaacatgaccgacaa	Protospacer
  ***.* *.************* * *******

52. spacer 1.4|846395|32|NZ_CP051749|PILER-CR,CRISPRCasFinder,CRT matches to NC_013855 (Azospirillum sp. B510 plasmid pAB510a, complete sequence) position: , mismatch: 6, identity: 0.812

-ccgacaatctccgcctccagtcggtcgacctg	CRISPR spacer
gtctac-atctccgcctccagcgggtcgaccgg	Protospacer
 .* ** **************. ******** *

53. spacer 2.9|874481|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP006570 (Sodalis praecaptivus strain HS1 plasmid pHS1, complete sequence) position: , mismatch: 6, identity: 0.812

ttaatcaggtcgtcgtactcagcgccgctggc	CRISPR spacer
ataatcaggtcgtcgttctctgcgcctcggtc	Protospacer
 *************** *** ***** * * *

54. spacer 2.12|874664|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to NC_016040 (Sulfobacillus thermotolerans strain Y0017 plasmid pY0017, complete sequence) position: , mismatch: 6, identity: 0.812

gagagcgaggggagattccggcagggcgtgca	CRISPR spacer
aatcgtgaggggatcttccggcagggcgtgca	Protospacer
.*  *.*******  *****************

55. spacer 1.2|846273|32|NZ_CP051749|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050254 (Orbus sp. IPMB12 plasmid pIPMB12, complete sequence) position: , mismatch: 7, identity: 0.781

agttaacaacccgcgccgaacaagcccgacaa	CRISPR spacer
tgttaaaaacccccgccgaacaagctcactaa	Protospacer
 ***** ***** ************.*. .**

56. spacer 1.6|846517|32|NZ_CP051749|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP017656 (Sphingobium cloacae strain JCM 10874 plasmid pSCLO_2, complete sequence) position: , mismatch: 7, identity: 0.781

ttcgccgccatcatcctgtggtgccagttgac	CRISPR spacer
ttcgccgccatcatcttctggtgcatgtccat	Protospacer
***************.* ******  **. *.

57. spacer 1.9|846700|32|NZ_CP051749|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP036405 (Komagataeibacter saccharivorans strain JH1 plasmid p221732, complete sequence) position: , mismatch: 7, identity: 0.781

gatcgccgggcgcggttacccgctgcgaaaat	CRISPR spacer
tatcgccgggcgcggctgcccgctgcgtcacg	Protospacer
 **************.*.*********  *

58. spacer 1.9|846700|32|NZ_CP051749|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023037 (Komagataeibacter saccharivorans strain CV1 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

gatcgccgggcgcggttacccgctgcgaaaat	CRISPR spacer
tatcgccgggcgcggctgcccgctgcgtcacg	Protospacer
 **************.*.*********  *

59. spacer 2.9|874481|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP047145 (Streptomyces sp. HF10 plasmid plas1, complete sequence) position: , mismatch: 7, identity: 0.781

ttaatcag--gtcgtcgtactcagcgccgctggc	CRISPR spacer
--agccggatgtcgtcgtagtccgcgccgctggc	Protospacer
  *..*.*  ********* ** ***********

60. spacer 1.4|846395|32|NZ_CP051749|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016821 (Rhodococcus sp. p52 plasmid pDF01, complete sequence) position: , mismatch: 8, identity: 0.75

ccgacaatctccgcctccagtcggtcgacctg	CRISPR spacer
gccgcgttctcggcctccagtcggtcgatctt	Protospacer
 * .*. **** ****************.**

61. spacer 1.4|846395|32|NZ_CP051749|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016821 (Rhodococcus sp. p52 plasmid pDF01, complete sequence) position: , mismatch: 8, identity: 0.75

ccgacaatctccgcctccagtcggtcgacctg	CRISPR spacer
gccgcgttctcggcctccagtcggtcgatctt	Protospacer
 * .*. **** ****************.**

62. spacer 1.10|846761|32|NZ_CP051749|PILER-CR,CRISPRCasFinder,CRT matches to MG925351 (Mycobacterium phage MPlant7149, complete genome) position: , mismatch: 8, identity: 0.75

ctcacgcgaggcatcgatcgtgatctgattgt	CRISPR spacer
gacgcccgaggcatcggccgtgatctgatgga	Protospacer
  *.* **********..*********** *

63. spacer 2.2|874054|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to MN901520 (Halorubrum coriense virus Hardycor2, complete genome) position: , mismatch: 8, identity: 0.75

acgaacgcggcacaccagggcgtctcatcgtc--	CRISPR spacer
ccgaacgcggcacacccgagcg--tcggcggcgg	Protospacer
 *************** *.***  **. ** *

64. spacer 2.9|874481|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP017656 (Sphingobium cloacae strain JCM 10874 plasmid pSCLO_2, complete sequence) position: , mismatch: 8, identity: 0.75

ttaatcaggtcgtcgtactcagcgccgctggc	CRISPR spacer
agagcatggtcgtcgcactcagcgccgcgggc	Protospacer
  *..  ********.************ ***

65. spacer 2.9|874481|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011450 (Sphingomonas sanxanigenens DSM 19645 = NX02 plasmid pNXO2, complete sequence) position: , mismatch: 8, identity: 0.75

ttaatcaggtcgtcgtactcagcgccgctggc	CRISPR spacer
agagcatggtcgtcgcactcagcgccgcgggc	Protospacer
  *..  ********.************ ***

66. spacer 2.11|874603|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to MN855878 (Bacteriophage sp. isolate 336, complete genome) position: , mismatch: 8, identity: 0.75

taatatccc----tggcgataatcaaccggcttact	CRISPR spacer
----acgccatggtggcgataatcatcctgcttact	Protospacer
    *. **    ************ ** *******

67. spacer 2.14|874786|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to MK820013 (Vibrio phage vB_VpaP_MGD2, complete genome) position: , mismatch: 8, identity: 0.75

tgatgttcaagtgtgtatgcacactcagcaaa	CRISPR spacer
agtacttcaagtgtgtacgcacagtcagctac	Protospacer
 *   ************.***** ***** *

68. spacer 1.5|846456|32|NZ_CP051749|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020900 (Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRphaBra5d, complete sequence) position: , mismatch: 9, identity: 0.719

tgtgcccgactgcgtgccgcgtcgagcgcctg	CRISPR spacer
gacgggcgacggcgtgctgcgtcgagcgcata	Protospacer
 ..*  **** ******.*********** *.

69. spacer 1.5|846456|32|NZ_CP051749|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013589 (Rhizobium phaseoli strain N161 plasmid pRphaN161d, complete sequence) position: , mismatch: 9, identity: 0.719

tgtgcccgactgcgtgccgcgtcgagcgcctg	CRISPR spacer
gacgggcgacggcgtgctgcgtcgagcgcata	Protospacer
 ..*  **** ******.*********** *.

70. spacer 1.5|846456|32|NZ_CP051749|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013562 (Rhizobium phaseoli strain N841 plasmid pRphaN841e, complete sequence) position: , mismatch: 9, identity: 0.719

tgtgcccgactgcgtgccgcgtcgagcgcctg	CRISPR spacer
gacgggcgacggcgtgctgcgtcgagcgcata	Protospacer
 ..*  **** ******.*********** *.

71. spacer 1.5|846456|32|NZ_CP051749|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013536 (Rhizobium phaseoli strain R650 plasmid pRphaR650d, complete sequence) position: , mismatch: 9, identity: 0.719

tgtgcccgactgcgtgccgcgtcgagcgcctg	CRISPR spacer
gacgggcgacggcgtgctgcgtcgagcgcata	Protospacer
 ..*  **** ******.*********** *.

72. spacer 1.5|846456|32|NZ_CP051749|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013546 (Rhizobium phaseoli strain R620 plasmid pRphaR620d, complete sequence) position: , mismatch: 9, identity: 0.719

tgtgcccgactgcgtgccgcgtcgagcgcctg	CRISPR spacer
gacgggcgacggcgtgctgcgtcgagcgcata	Protospacer
 ..*  **** ******.*********** *.

73. spacer 1.5|846456|32|NZ_CP051749|PILER-CR,CRISPRCasFinder,CRT matches to NC_010997 (Rhizobium etli CIAT 652 plasmid pC, complete sequence) position: , mismatch: 9, identity: 0.719

tgtgcccgactgcgtgccgcgtcgagcgcctg	CRISPR spacer
gacgggcgacggcgtgctgcgtcgagcgcata	Protospacer
 ..*  **** ******.*********** *.

74. spacer 1.9|846700|32|NZ_CP051749|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 9, identity: 0.719

gatcgccgggcgcggttacccgctgcgaaaat	CRISPR spacer
cgccgccgagcgcggtcacccgctgcgcgacc	Protospacer
 ..*****.*******.********** .* .

75. spacer 2.9|874481|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011515 (Mitsuaria sp. 7 plasmid, complete sequence) position: , mismatch: 9, identity: 0.719

ttaatcaggtcgtcgtactcagcgccgctggc	CRISPR spacer
cgctgcaggtcgtcgtcctcagcaccgccagc	Protospacer
.    *********** ******.****..**

76. spacer 2.13|874725|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to MN340231 (Escherichia phage phiv205-1, complete genome) position: , mismatch: 9, identity: 0.719

aaaaccgatatttaccaggttgttactgatag	CRISPR spacer
aagaccgatatttgccaggttgttgtaattgt	Protospacer
**.**********.**********.. . *.

77. spacer 2.13|874725|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to CP000711 (Enterobacteria phage CUS-3, complete genome) position: , mismatch: 9, identity: 0.719

aaaaccgatatttaccaggttgttactgatag	CRISPR spacer
aagaccgatatttgccaggttgttgtaattgt	Protospacer
**.**********.**********.. . *.

78. spacer 2.13|874725|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to MH717096 (Escherichia phage N7, complete genome) position: , mismatch: 9, identity: 0.719

aaaaccgatatttaccaggttgttactgatag	CRISPR spacer
aagaccgatatttgccaggttgttgtaattgt	Protospacer
**.**********.**********.. . *.

79. spacer 2.5|874237|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022775 (Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

ggtgctgtctttaccgtacattgcgcgaatct	CRISPR spacer
gcccaaccctttaccggacattgcgcgagtcg	Protospacer
* .    .******** ***********.**

80. spacer 2.5|874237|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022762 (Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

ggtgctgtctttaccgtacattgcgcgaatct	CRISPR spacer
gcccaaccctttaccggacattgcgcgagtcg	Protospacer
* .    .******** ***********.**

81. spacer 2.5|874237|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023017 (Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

ggtgctgtctttaccgtacattgcgcgaatct	CRISPR spacer
gcccaaccctttaccggacattgcgcgagtcg	Protospacer
* .    .******** ***********.**

82. spacer 2.5|874237|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014703 (Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence) position: , mismatch: 10, identity: 0.688

ggtgctgtctttaccgtacattgcgcgaatct	CRISPR spacer
gcccaaccctttaccggacattgcgcgagtcg	Protospacer
* .    .******** ***********.**

83. spacer 2.5|874237|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022771 (Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

ggtgctgtctttaccgtacattgcgcgaatct	CRISPR spacer
gcccaaccctttaccggacattgcgcgagtcg	Protospacer
* .    .******** ***********.**

84. spacer 2.5|874237|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022777 (Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

ggtgctgtctttaccgtacattgcgcgaatct	CRISPR spacer
gcccaaccctttaccggacattgcgcgagtcg	Protospacer
* .    .******** ***********.**

85. spacer 2.5|874237|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022799 (Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

ggtgctgtctttaccgtacattgcgcgaatct	CRISPR spacer
gcccaaccctttaccggacattgcgcgagtcg	Protospacer
* .    .******** ***********.**

86. spacer 2.5|874237|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022764 (Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

ggtgctgtctttaccgtacattgcgcgaatct	CRISPR spacer
gcccaaccctttaccggacattgcgcgagtcg	Protospacer
* .    .******** ***********.**

87. spacer 2.5|874237|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022797 (Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

ggtgctgtctttaccgtacattgcgcgaatct	CRISPR spacer
gcccaaccctttaccggacattgcgcgagtcg	Protospacer
* .    .******** ***********.**

88. spacer 2.5|874237|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022758 (Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

ggtgctgtctttaccgtacattgcgcgaatct	CRISPR spacer
gcccaaccctttaccggacattgcgcgagtcg	Protospacer
* .    .******** ***********.**

89. spacer 2.8|874420|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to MN693290 (Marine virus AFVG_25M557, complete genome) position: , mismatch: 10, identity: 0.688

tttttccagctccagcattgctgttgtattga	CRISPR spacer
catttccagctacagcattgatgttacttgag	Protospacer
. ********* ******** ****.. * ..

90. spacer 2.8|874420|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to MN693243 (Marine virus AFVG_25M556, complete genome) position: , mismatch: 10, identity: 0.688

tttttccagctccagcattgctgttgtattga	CRISPR spacer
catttccagctacagcattgatgttacttgag	Protospacer
. ********* ******** ****.. * ..

91. spacer 2.9|874481|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to MN850587 (Escherichia phage mistaenkt, complete genome) position: , mismatch: 10, identity: 0.688

ttaatcaggtcgtcgtactcagcgccgctggc	CRISPR spacer
ttaatcaggtcgtcgtagacagcttttagaga	Protospacer
*****************  **** ..   .*

92. spacer 2.9|874481|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to MH791400 (UNVERIFIED: Escherichia phage EcSzw-2, complete genome) position: , mismatch: 10, identity: 0.688

ttaatcaggtcgtcgtactcagcgccgctggc	CRISPR spacer
ttaatcaggtcgtcgtagacagcttttagaga	Protospacer
*****************  **** ..   .*

93. spacer 2.9|874481|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to MK562504 (Enterobacteria phage CHB7, complete genome) position: , mismatch: 10, identity: 0.688

ttaatcaggtcgtcgtactcagcgccgctggc	CRISPR spacer
ttaatcaggtcgtcgtagacagcttttagaga	Protospacer
*****************  **** ..   .*

94. spacer 2.9|874481|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to NC_028808 (Escherichia phage SUSP1, complete genome) position: , mismatch: 10, identity: 0.688

ttaatcaggtcgtcgtactcagcgccgctggc	CRISPR spacer
ttaatcaggtcgtcgtagacagcttttagaga	Protospacer
*****************  **** ..   .*

95. spacer 2.9|874481|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to MH791413 (UNVERIFIED: Escherichia phage EcSzw_1, complete genome) position: , mismatch: 10, identity: 0.688

ttaatcaggtcgtcgtactcagcgccgctggc	CRISPR spacer
ttaatcaggtcgtcgtagacagcttttagaga	Protospacer
*****************  **** ..   .*

96. spacer 2.9|874481|32|NZ_CP051749|CRISPRCasFinder,CRT,PILER-CR matches to NC_028935 (Escherichia phage SUSP2, complete genome) position: , mismatch: 10, identity: 0.688

ttaatcaggtcgtcgtactcagcgccgctggc	CRISPR spacer
ttaatcaggtcgtcgtagacagcttttagaga	Protospacer
*****************  **** ..   .*

97. spacer 1.2|846273|32|NZ_CP051749|PILER-CR,CRISPRCasFinder,CRT matches to NC_013449 (Streptomyces sp. W9 plasmid pCQ3, complete sequence) position: , mismatch: 11, identity: 0.656

agttaacaacccgcgccgaacaagcccgacaa	CRISPR spacer
ccgcctggacccccgccgaacaagcccaacac	Protospacer
   .   .**** **************.***

98. spacer 1.2|846273|32|NZ_CP051749|PILER-CR,CRISPRCasFinder,CRT matches to NC_019307 (Streptomyces sp. W75 plasmid pCQ4, complete sequence) position: , mismatch: 11, identity: 0.656

agttaacaacccgcgccgaacaagcccgacaa	CRISPR spacer
ccgcctggacccccgccgaacaagcccaacac	Protospacer
   .   .**** **************.***

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

176577 : 186020

Enterobacteria_phage(85.71%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001551350.1\|176577_177714_+	VWA domain-containing protein	Q9EYF7	Enterobacteria_phage	5.0e-163	97.4
WP_001551351.1\|177710_179711_+	SWIM zinc finger family protein	Q9EYF6	Enterobacteria_phage	0.0e+00	95.7
WP_001295429.1\|179835_180297_+	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	1.9e-76	100.0
WP_001551352.1\|180338_180809_-	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	5.2e-82	99.4
WP_001308766.1\|180855_181575_-	two-component system response regulator BtsR	NA	NA	NA	NA
WP_001295431.1\|181571_183257_-	two-component regulatory system sensor histidine kinase BtsS	Q9EYF3	Enterobacteria_phage	2.5e-304	99.6
WP_169062332.1\|183478_184210_+	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	8.2e-111	98.5
WP_001216963.1\|184269_184377_+	protein YohO	NA	NA	NA	NA
WP_000783134.1\|184357_185089_-	glycine betaine ABC transporter permease YehW	NA	NA	NA	NA
WP_000569343.1\|185093_186020_-	glycine betaine ABC transporter ATP binding protein YehX	G3M9Y6	Bacillus_virus	1.3e-23	30.8

DBSCAN-SWA_2

822687 : 829827

Escherichia_phage(83.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001272891.1\|822687_825249_+	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	2.7e-31	20.7
WP_001141345.1\|825354_826011_+	protein-serine/threonine phosphatase	A0A077SLQ6	Escherichia_phage	5.0e-51	47.0
WP_001295181.1\|826061_826829_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	2.5e-70	56.7
WP_000847985.1\|827024_827933_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	3.0e-118	76.9
WP_001551546.1\|827929_829192_+	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	3.7e-135	61.2
WP_001278994.1\|829188_829827_+	aldolase	A0A077SK32	Escherichia_phage	1.4e-82	75.0

DBSCAN-SWA_3

2328777 : 2372303

Enterobacteria_phage(45.71%)

integrase,head,tail

attL 2328726:2328753|attR 2375488:2375515

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2328726:2328753	attL	NA	NA	NA	NA
WP_001196928.1\|2328777_2329986_+\|integrase	site-specific integrase	I6R9B6	Salmonella_phage	4.7e-180	74.9
WP_001354056.1\|2329943_2330174_-	hypothetical protein	A0A1P8DTG1	Proteus_phage	2.9e-14	55.7
WP_000488401.1\|2330264_2330543_-	DUF4222 domain-containing protein	M1FPC8	Enterobacteria_phage	1.4e-47	96.7
WP_000763364.1\|2330590_2330809_-	TraR/DksA family transcriptional regulator	M1FQT7	Enterobacteria_phage	1.8e-34	95.8
WP_001386642.1\|2330907_2331189_-	cell division protein ZapA	A0A0P0ZE02	Stx2-converting_phage	5.5e-47	98.9
WP_000548531.1\|2331199_2331391_-	DUF1382 family protein	A0A0P0ZC67	Stx2-converting_phage	7.3e-27	100.0
WP_000682318.1\|2331363_2331546_-	DUF1317 domain-containing protein	A0A0N7CHV0	Escherichia_phage	1.3e-28	98.3
WP_000186804.1\|2331542_2332223_-	YqaJ viral recombinase family protein	A0A0N6WET1	Escherichia_phage	1.3e-131	98.7
WP_000100847.1\|2332219_2333005_-	phage recombination protein Bet	A0A1I9LJN0	Stx_converting_phage	6.3e-149	100.0
WP_000995443.1\|2333010_2333307_-	host-nuclease inhibitor protein Gam	A0A1I9LJN1	Stx_converting_phage	4.7e-49	99.0
WP_023148105.1\|2333382_2333673_-	hypothetical protein	K7P6H3	Enterobacteria_phage	5.0e-27	85.1
WP_000259990.1\|2334184_2334940_-	helix-turn-helix transcriptional regulator	Q76H56	Enterobacteria_phage	1.4e-92	75.0
WP_001067458.1\|2334978_2335209_+	helix-turn-helix domain-containing protein	A0A2H4FNF3	Salmonella_phage	1.5e-21	68.0
WP_001182891.1\|2335278_2335818_+	hypothetical protein	K7PJT7	Enterobacteria_phage	6.8e-62	67.6
WP_001551200.1\|2335904_2336834_+	replication protein	A0A0M5M7Y1	Salmonella_phage	8.0e-111	64.1
WP_000788813.1\|2336830_2337532_+	hypothetical protein	M1FJ72	Enterobacteria_phage	3.8e-129	99.1
WP_000145915.1\|2337528_2337831_+	protein ren	A0A0N6WES4	Escherichia_phage	1.1e-42	95.7
WP_001070450.1\|2337898_2338231_+	SMR family multidrug efflux protein EmrE	NA	NA	NA	NA
WP_001356997.1\|2338304_2338427_+	hypothetical protein	NA	NA	NA	NA
WP_001445652.1\|2340464_2341016_+	Raf kinase inhibitor-like protein YbcL	NA	NA	NA	NA
WP_000881075.1\|2341025_2341823_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_001303586.1\|2341939_2342041_+	hypothetical protein	NA	NA	NA	NA
WP_001054342.1\|2342037_2342493_+	DNA base-flipping protein YbcN	I6PD71	Cronobacter_phage	5.4e-60	66.9
WP_000224916.1\|2342492_2342663_+	hypothetical protein	K7P7K0	Enterobacteria_phage	1.5e-12	67.9
WP_000774488.1\|2342655_2342946_+	DUF1364 domain-containing protein	K7PGZ6	Enterobacteria_phage	4.3e-47	94.8
WP_000971055.1\|2343302_2343443_+	YlcG family protein	K7PHH3	Enterobacteria_phage	1.1e-08	69.8
WP_001204777.1\|2343528_2343906_+	antitermination protein	Q777W5	Enterobacteria_phage	7.3e-55	84.2
WP_000780581.1\|2344061_2344586_-	lipocalin family protein	A0A1W6JNX6	Morganella_phage	1.1e-48	54.1
WP_000592546.1\|2344778_2345738_+	DUF523 and DUF1722 domain-containing protein	NA	NA	NA	NA
WP_169062365.1\|2347235_2347733_+	lysozyme RrrD	M1FJA0	Enterobacteria_phage	6.0e-89	96.4
WP_169062366.1\|2348211_2348511_-	increased serum survival lipoprotein Iss	C6ZCX3	Enterobacteria_phage	1.4e-40	90.3
WP_169062367.1\|2350213_2350444_+	hypothetical protein	A0A2I6TC92	Escherichia_phage	2.5e-34	97.1
WP_000198149.1\|2351617_2351824_+\|head,tail	Lambda prophage-derived head-to-tail joining protein W	A0A2R9YJL2	Escherichia_phage	5.8e-30	100.0
WP_000158895.1\|2356181_2356577_+	hypothetical protein	A0A2R9YJP4	Escherichia_phage	4.5e-55	93.2
WP_000847339.1\|2362058_2362388_+\|tail	phage tail protein	A0A2R9YJM0	Escherichia_phage	2.8e-58	97.2
WP_001551186.1\|2362387_2363086_+\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	8.9e-131	97.4
WP_000090872.1\|2363771_2364404_+\|tail	tail assembly protein	A0A2R9YJH6	Escherichia_phage	1.2e-94	97.1
WP_019843055.1\|2364464_2367863_+	host specificity protein J	K7PKJ2	Enterobacteria_phage	0.0e+00	89.9
WP_001563781.1\|2367930_2368530_+	Ail/Lom family outer membrane beta-barrel protein	Q9EV15	Enterobacteria_phage	8.6e-98	88.4
WP_001518417.1\|2370971_2371253_+	hypothetical protein	A0A1X7QHA1	Escherichia_phage	1.4e-18	50.0
WP_016247637.1\|2371262_2372303_+\|tail	tail fiber domain-containing protein	A0A0E3M4A9	Enterobacteria_phage	3.0e-122	66.1
2375488:2375515	attR	NA	NA	NA	NA

DBSCAN-SWA_4

2746710 : 2774218

Escherichia_phage(33.33%)

tail,terminase,lysis

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_169062373.1\|2746710_2749059_-\|tail	phage tail protein	A0A0E3M0V5	Enterobacteria_phage	9.5e-92	45.4
WP_169062374.1\|2749795_2753275_-	host specificity protein J	A5LH43	Enterobacteria_phage	0.0e+00	90.2
WP_050496112.1\|2753335_2753938_-\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	3.4e-86	83.7
WP_021520058.1\|2753874_2754618_-\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	4.0e-145	95.5
WP_001578255.1\|2754623_2755322_-\|tail	phage minor tail protein L	A0A1B5FP81	Escherichia_phage	1.9e-128	94.4
WP_000024051.1\|2755321_2755660_-\|tail	phage tail protein	H6WZM2	Escherichia_phage	4.0e-28	50.0
WP_169062375.1\|2755652_2758889_-\|tail	phage tail tape measure protein	A0A2H4J9A1	uncultured_Caudovirales_phage	8.7e-112	34.5
WP_141010409.1\|2759362_2759722_-	hypothetical protein	NA	NA	NA	NA
WP_000094292.1\|2759872_2760835_-	hypothetical protein	A0A059VG08	Pseudomonas_phage	4.5e-56	39.2
WP_000144678.1\|2760861_2761254_-	hypothetical protein	NA	NA	NA	NA
WP_001405084.1\|2761250_2761631_-	hypothetical protein	A0A059VF88	Pseudomonas_phage	5.5e-18	43.6
WP_000524262.1\|2761631_2762015_-	hypothetical protein	A0A0P0I456	Acinetobacter_phage	4.4e-15	40.2
WP_000634214.1\|2762014_2762410_-	hypothetical protein	NA	NA	NA	NA
WP_000908084.1\|2762413_2762590_-	hypothetical protein	G8C7P8	Escherichia_phage	4.7e-12	62.3
WP_000918483.1\|2762632_2763772_-	hypothetical protein	G8C7P7	Escherichia_phage	3.3e-159	75.0
WP_000770038.1\|2763870_2764635_-	hypothetical protein	G8C7P6	Escherichia_phage	3.9e-87	66.5
WP_001317036.1\|2764739_2765852_-	hypothetical protein	I6PD76	Cronobacter_phage	6.0e-113	54.8
WP_000763709.1\|2765835_2767242_-	DUF4055 domain-containing protein	G8C7P4	Escherichia_phage	8.8e-186	68.8
WP_001578252.1\|2767244_2768546_-	hypothetical protein	A0A1B1P9C9	Acinetobacter_phage	1.8e-148	59.8
WP_000089446.1\|2768526_2769621_-\|terminase	terminase small subunit	A0A0U2RXW9	Escherichia_phage	4.5e-113	80.2
WP_000126788.1\|2769624_2769834_-	hypothetical protein	NA	NA	NA	NA
WP_001204032.1\|2769811_2770744_-	hypothetical protein	A0A1B1INP7	uncultured_Mediterranean_phage	1.9e-83	54.9
WP_001291102.1\|2770736_2771525_-	ParB N-terminal domain-containing protein	R4TG31	Halovirus	7.4e-49	40.9
WP_001228696.1\|2773315_2773501_-\|lysis	prophage lysis lipoprotein RzoD	K7PHU6	Enterobacteria_phage	2.8e-15	98.2
WP_001135296.1\|2773720_2774218_-	lysozyme RrrD	M1FJA0	Enterobacteria_phage	1.6e-89	97.0

DBSCAN-SWA_5

2780355 : 2796047

Escherichia_phage(57.89%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_169062376.1\|2780355_2780598_-	DNA cytosine methyltransferase	A0A0R6PG08	Moraxella_phage	4.8e-15	56.7
WP_169062377.1\|2780702_2781014_-	DNA cytosine methyltransferase	A0A0R6PG08	Moraxella_phage	2.3e-06	38.3
WP_072664904.1\|2781778_2782201_-	DUF977 family protein	A0A0U2QQN3	Escherichia_phage	1.2e-61	91.9
WP_045145123.1\|2782216_2782978_-	DUF1627 domain-containing protein	A0A0U2SAW4	Escherichia_phage	1.8e-116	87.7
WP_072664903.1\|2783000_2783747_-	ATP-binding protein	V5UQI5	Shigella_phage	1.1e-113	81.6
WP_021542964.1\|2783753_2784542_-	hypothetical protein	G9L6A8	Escherichia_phage	3.0e-42	65.0
WP_045145118.1\|2784620_2785043_-	hypothetical protein	A0A0U2RXZ9	Escherichia_phage	6.5e-68	92.9
WP_045145116.1\|2785039_2785282_-	helix-turn-helix transcriptional regulator	K7PKH4	Enterobacteria_phage	5.1e-17	60.6
WP_000410102.1\|2785378_2785798_+	helix-turn-helix domain-containing protein	K7PH71	Enterobacterial_phage	3.1e-14	60.6
WP_001169151.1\|2786245_2786401_+	YdaF family protein	M4QQ57	Salicola_phage	6.1e-08	55.3
WP_001312793.1\|2786397_2786886_-	superinfection exclusion protein B	NA	NA	NA	NA
WP_000560223.1\|2787327_2787549_+	killing protein KilR	A0A0U2RTC4	Escherichia_phage	2.0e-36	98.6
WP_001352098.1\|2787548_2787719_+	conserved protein, Rac prophage	A0A0U2SHB5	Escherichia_phage	3.6e-17	71.4
WP_000632297.1\|2787793_2788069_+	protein RacC	A0A0U2QW85	Escherichia_phage	1.4e-42	96.7
WP_000105139.1\|2788170_2790771_+	exodeoxyribonuclease VIII	A0A0U2I1R6	Escherichia_phage	7.9e-249	63.6
WP_000166319.1\|2790763_2791573_+	recombination protein RecT	A0A1P8DTF2	Proteus_phage	8.8e-106	71.5
WP_000079604.1\|2792105_2792321_+	excisionase XisR	A0A0U2RY08	Escherichia_phage	1.8e-37	100.0
WP_000040858.1\|2792322_2793558_+	DUF3596 domain-containing protein	A0A0U2JGI6	Escherichia_phage	1.6e-239	98.5
WP_001157407.1\|2793609_2794545_+\|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	A0A0U2S5Z2	Escherichia_phage	5.9e-146	98.8
WP_001551034.1\|2794673_2796047_-	ATP-dependent RNA helicase DbpA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	6.6e-53	33.1

DBSCAN-SWA_6

3006617 : 3074613

Enterobacteria_phage(40.0%)

tail,terminase,lysis,capsid,tRNA,integrase,head,portal,holin

attL 3025692:3025706|attR 3074715:3074729

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001295972.1\|3006617_3007724_+\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_001297479.1\|3007759_3008401_+	high frequency lysogenization protein HflD	NA	NA	NA	NA
WP_000423742.1\|3008404_3009775_+	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	1.2e-107	44.9
WP_001265481.1\|3009943_3010615_+	two-component system response regulator PhoP	NA	NA	NA	NA
WP_000735412.1\|3010614_3012075_+	two-component system sensor histidine kinase PhoQ	NA	NA	NA	NA
WP_000133413.1\|3012629_3012911_-	hypothetical protein	NA	NA	NA	NA
WP_000565609.1\|3013076_3013511_+	hypothetical protein	NA	NA	NA	NA
WP_001403033.1\|3013786_3014200_-	hypothetical protein	NA	NA	NA	NA
WP_000380877.1\|3014212_3014548_-\|head	head decoration protein	NA	NA	NA	NA
WP_001403032.1\|3014559_3015615_-\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	7.1e-71	44.0
WP_000796959.1\|3015614_3015821_-	hypothetical protein	NA	NA	NA	NA
WP_032180518.1\|3016075_3016324_-	PerC family transcriptional regulator	NA	NA	NA	NA
WP_000126698.1\|3016334_3016745_-	single-stranded DNA-binding protein	NA	NA	NA	NA
WP_000557475.1\|3016741_3017020_-	hypothetical protein	NA	NA	NA	NA
WP_169062384.1\|3017308_3019063_-	DNA primase	Q7M2A8	Enterobacteria_phage	1.0e-90	39.8
WP_000770153.1\|3019059_3019359_-	DUF4222 domain-containing protein	NA	NA	NA	NA
WP_000549005.1\|3019364_3019592_-	hypothetical protein	NA	NA	NA	NA
WP_000551676.1\|3019584_3019815_-	hypothetical protein	NA	NA	NA	NA
WP_064735217.1\|3019804_3020005_-	host cell division inhibitor Icd-like protein	NA	NA	NA	NA
WP_064735216.1\|3020198_3020504_+	hypothetical protein	NA	NA	NA	NA
WP_169062385.1\|3021004_3021193_-	AlpA family transcriptional regulator	A0A2H4JB58	uncultured_Caudovirales_phage	7.0e-14	66.7
WP_032180526.1\|3021556_3022786_-\|integrase	site-specific integrase	A0A2H4JB45	uncultured_Caudovirales_phage	1.1e-131	55.6
WP_001295435.1\|3023033_3024155_+	[50S ribosomal protein L16]-arginine 3-hydroxylase	NA	NA	NA	NA
WP_000359446.1\|3024203_3025430_-	peptidase T	NA	NA	NA	NA
WP_000531594.1\|3025679_3026816_+	spermidine/putrescine ABC transporter ATP-binding protein PotA	Q6GZ03	Mycoplasma_phage	5.5e-29	39.8
3025692:3025706	attL	NA	NA	NA	NA
WP_000799406.1\|3026799_3027663_+	spermidine/putrescine ABC transporter permease PotB	Q6GZ02	Mycoplasma_phage	6.7e-11	28.7
WP_000937496.1\|3027894_3028161_-\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	2.3e-18	78.3
WP_001550976.1\|3028229_3028886_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_071586406.1\|3028940_3029039_-\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	1.2e-06	78.1
WP_000355700.1\|3029078_3029372_-	hypothetical protein	NA	NA	NA	NA
WP_001204582.1\|3029381_3029660_-	hypothetical protein	A0A0E3JSQ1	Enterobacteria_phage	1.0e-21	50.5
WP_021553086.1\|3031872_3032472_-	Ail/Lom family outer membrane beta-barrel protein	Q9EV15	Enterobacteria_phage	5.4e-100	89.4
WP_021519674.1\|3032539_3036232_-	DUF1983 domain-containing protein	A0A0P0ZCI5	Stx2-converting_phage	0.0e+00	85.9
WP_072258937.1\|3036576_3037209_-\|tail	tail assembly protein	B6ETG3	Enterobacteria_phage	1.7e-96	92.3
WP_001576728.1\|3037154_3037898_-\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	8.3e-143	93.4
WP_001327694.1\|3037903_3038602_-\|tail	phage minor tail protein L	S5M7Q4	Escherichia_phage	7.6e-130	97.0
WP_000847298.1\|3038601_3038931_-\|tail	phage tail protein	Q687F2	Enterobacteria_phage	4.3e-59	100.0
WP_169062386.1\|3039621_3040107_-\|tail	phage tail tape measure protein	A0A0K2FI43	Enterobacteria_phage	1.4e-74	99.4
WP_169062387.1\|3040305_3041493_-\|tail	phage tail tape measure protein	A0A0K2FI43	Enterobacteria_phage	1.4e-187	90.1
WP_000533402.1\|3041473_3041887_-\|tail	phage tail assembly protein T	S5MDP5	Escherichia_phage	1.6e-42	82.2
WP_001299690.1\|3041913_3042345_-\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	2.4e-41	67.4
WP_000235037.1\|3042363_3043110_-\|tail	phage tail protein	Q687F6	Enterobacteria_phage	8.7e-124	93.4
WP_000683079.1\|3043117_3043513_-\|tail	tail protein	A0A2R9YJI2	Escherichia_phage	1.5e-58	82.4
WP_000974995.1\|3043509_3044043_-\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	1.2e-55	64.1
WP_001204571.1\|3044058_3044412_-\|tail	tail attachment protein	A0A0K2FJB7	Enterobacteria_phage	1.1e-41	70.1
WP_000201498.1\|3044404_3044788_-	hypothetical protein	NA	NA	NA	NA
WP_000522583.1\|3044839_3045868_-\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	8.6e-114	61.9
WP_000256835.1\|3045925_3046273_-\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	2.9e-21	55.9
WP_001253953.1\|3046309_3047815_-	S49 family peptidase	A0A2I6TC87	Escherichia_phage	2.7e-100	53.5
WP_001537684.1\|3047804_3049397_-\|portal	phage portal protein	K7P6U7	Enterobacteria_phage	2.9e-185	61.3
WP_000258993.1\|3049393_3049600_-\|head,tail	head-tail joining protein	K7PM10	Enterobacteria_phage	3.0e-10	55.4
WP_001537733.1\|3049583_3051512_-\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	9.4e-263	66.5
WP_000235436.1\|3051483_3051993_-\|terminase	terminase small subunit	A0A1I9KFT4	Aeromonas_phage	1.6e-12	32.7
WP_001322427.1\|3052475_3052829_+	hypothetical protein	NA	NA	NA	NA
WP_000830178.1\|3052951_3053278_-	TonB family protein	H6WZK5	Escherichia_phage	3.7e-39	72.2
WP_032196491.1\|3053589_3054057_-\|lysis	lysis protein	Q6H9V3	Enterobacteria_phage	1.5e-65	83.8
WP_001280932.1\|3054059_3054191_-	hypothetical protein	A0A0P0ZG36	Escherichia_phage	2.6e-07	79.1
WP_001446668.1\|3054205_3054388_-	hypothetical protein	NA	NA	NA	NA
WP_001545912.1\|3054544_3055078_-	lysozyme	Q6H9V6	Enterobacteria_phage	3.3e-101	96.6
WP_001545911.1\|3055114_3056005_-	YdfR family protein	Q08JA0	Stx2-converting_phage	4.7e-108	70.6
WP_000284506.1\|3056009_3056225_-\|holin	class II holin family protein	Q9ZWW2	Enterobacteria_phage	6.9e-34	100.0
WP_001545910.1\|3056374_3056536_-	hypothetical protein	Q08JA2	Stx2-converting_phage	3.5e-14	87.0
WP_001309419.1\|3056532_3056736_-	DUF1737 domain-containing protein	H6WZJ9	Escherichia_phage	2.7e-27	96.8
WP_169062388.1\|3056981_3057317_+	anti-adapter protein IraM	Q8HAJ1	Enterobacteria_phage	1.5e-43	74.8
WP_001438304.1\|3057597_3057729_-	DUF3927 family protein	H6WZJ7	Escherichia_phage	1.1e-05	96.4
WP_001545909.1\|3058621_3059443_-	antitermination protein	K7P7B9	Enterobacteria_phage	1.8e-77	58.6
WP_000139998.1\|3059457_3059820_-	RusA family crossover junction endodeoxyribonuclease	V5URS4	Shigella_phage	9.6e-36	63.6
WP_001545908.1\|3059820_3060879_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	4.9e-88	47.7
WP_023141427.1\|3060880_3061153_-	hypothetical protein	I6PCV7	Cronobacter_phage	4.2e-12	50.8
WP_000813254.1\|3061320_3061476_-	type I toxin-antitoxin system toxin HokD	A0A0U2QV81	Escherichia_phage	1.5e-17	96.1
WP_001529162.1\|3062084_3062399_-	hypothetical protein	A0A076GCN9	Escherichia_phage	3.0e-25	71.6
WP_000753058.1\|3062395_3062572_-	hypothetical protein	A0A2R2X2A8	Escherichia_phage	4.3e-26	93.1
WP_001224662.1\|3062564_3062747_-	hypothetical protein	A0A2R2Z308	Escherichia_phage	1.4e-27	100.0
WP_000403785.1\|3062840_3063197_-	hypothetical protein	A0A2R2Z307	Escherichia_phage	1.8e-58	99.2
WP_001529163.1\|3063174_3063798_-	ead/Ea22-like family protein	Q8VNQ2	Enterobacteria_phage	5.4e-103	93.5
WP_001545907.1\|3064054_3064357_-	DUF4406 domain-containing protein	A0A0U2SAZ1	Escherichia_phage	1.6e-47	89.9
WP_072146789.1\|3064353_3064635_-	DNA-binding protein	A0A222YXX1	Escherichia_phage	3.4e-33	78.5
WP_001545906.1\|3064667_3065384_-	DUF1627 domain-containing protein	A0A0U2SAW4	Escherichia_phage	1.3e-71	62.1
WP_001545904.1\|3065405_3066152_-	ATP-binding protein	A0A088CBP4	Shigella_phage	2.6e-112	83.4
WP_000095671.1\|3066158_3067121_-	helix-turn-helix domain-containing protein	U5P0A0	Shigella_phage	2.1e-69	51.2
WP_000693943.1\|3067143_3067569_-	Rha family transcriptional regulator	NA	NA	NA	NA
WP_001517935.1\|3067565_3067781_-	hypothetical protein	NA	NA	NA	NA
WP_000103685.1\|3067830_3068547_+	helix-turn-helix domain-containing protein	H9C160	Pectobacterium_phage	1.0e-52	42.0
WP_000379589.1\|3068819_3068975_+	DUF1391 family protein	M4QQ57	Salicola_phage	8.8e-07	51.1
WP_001545903.1\|3069134_3069353_+	hypothetical protein	NA	NA	NA	NA
WP_000394528.1\|3069375_3069750_+	hypothetical protein	NA	NA	NA	NA
WP_023148810.1\|3069735_3069882_-	hypothetical protein	NA	NA	NA	NA
WP_000449175.1\|3070290_3070479_+	cell division inhibitor	NA	NA	NA	NA
WP_000199475.1\|3070475_3070664_+	DUF1482 family protein	NA	NA	NA	NA
WP_000102132.1\|3070756_3073195_+	exonuclease	V5UQJ3	Shigella_phage	2.3e-112	45.0
WP_000003742.1\|3073256_3073526_+	excisionase	NA	NA	NA	NA
WP_001545902.1\|3073494_3074613_+\|integrase	phage integrase Arm DNA-binding domain-containing protein	Q77Z04	Phage_21	1.0e-83	43.9
3074715:3074729	attR	NA	NA	NA	NA

DBSCAN-SWA_7

3984910 : 4044745

Ralstonia_phage(15.38%)

integrase,plate,transposase

attL 3982336:3982352|attR 4055323:4055339

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3982336:3982352	attL	NA	NA	NA	NA
WP_072130023.1\|3984910_3986311_+\|integrase	integrase family protein	A0A221SAN4	Ralstonia_phage	1.6e-06	29.1
WP_032186138.1\|3986427_3986868_+	hypothetical protein	NA	NA	NA	NA
WP_021515894.1\|3986864_3987089_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_032186134.1\|3989073_3989700_+	inovirus Gp2 family protein	NA	NA	NA	NA
WP_032186132.1\|3994710_3995586_+	GTPase family protein	NA	NA	NA	NA
WP_032186131.1\|3995799_3996507_+	WYL domain-containing protein	NA	NA	NA	NA
WP_001458941.1\|3996508_3996658_+	hypothetical protein	NA	NA	NA	NA
WP_032186130.1\|3996669_3996885_+\|transposase	transposase	NA	NA	NA	NA
WP_000642925.1\|3996975_3997386_+	hypothetical protein	G5DES5	Salmonella_phage	2.1e-26	42.6
WP_032186128.1\|3997451_3998390_+	hypothetical protein	NA	NA	NA	NA
WP_032186126.1\|3998479_3999298_+	DUF945 domain-containing protein	A0A2C9CX26	Yersinia_phage	6.7e-45	37.9
WP_032186124.1\|3999389_3999872_+	antirestriction protein	A9J566	Pseudomonas_phage	3.4e-12	31.2
WP_032186123.1\|3999887_4000364_+	RadC family protein	NA	NA	NA	NA
WP_039264365.1\|4000426_4000648_+	DUF987 domain-containing protein	A0A142F0X9	Klebsiella_phage	5.5e-10	44.4
WP_000942525.1\|4001931_4003002_+	DNA cytosine methyltransferase	A0A1B1IRZ3	uncultured_Mediterranean_phage	2.6e-20	29.6
WP_001444700.1\|4002980_4003640_-	HNH endonuclease	NA	NA	NA	NA
WP_001550659.1\|4004158_4005412_-	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	5.8e-96	47.5
WP_001285288.1\|4005423_4006527_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	1.1e-61	40.4
WP_000749881.1\|4006813_4007869_+	phosphoporin PhoE	Q1MVN1	Enterobacteria_phage	7.7e-118	60.9
WP_000174684.1\|4007907_4008309_-	sigma factor-binding protein Crl	NA	NA	NA	NA
WP_000189541.1\|4008366_4009611_-	esterase FrsA	NA	NA	NA	NA
WP_001291990.1\|4009702_4010161_-	xanthine phosphoribosyltransferase	NA	NA	NA	NA
WP_001293009.1\|4010421_4011879_+	cytosol nonspecific dipeptidase	NA	NA	NA	NA
WP_023063669.1\|4011935_4012076_-	peptide chain release factor	NA	NA	NA	NA
WP_001521905.1\|4012235_4012490_-	hypothetical protein	NA	NA	NA	NA
WP_019842500.1\|4012735_4013188_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_001263491.1\|4013197_4013596_-	type II toxin-antitoxin system mRNA interferase toxin YafO	NA	NA	NA	NA
WP_000554755.1\|4013598_4013892_-	type I toxin-antitoxin system antitoxin YafN	NA	NA	NA	NA
WP_001550655.1\|4013943_4014999_-	DNA polymerase IV	NA	NA	NA	NA
WP_019842510.1\|4015069_4015855_-	putative lateral flagellar export/assembly protein LafU	NA	NA	NA	NA
WP_001550652.1\|4015799_4017539_+	flagellar type III secretion system protein FlhA	NA	NA	NA	NA
WP_000598760.1\|4017643_4017922_+	type II toxin-antitoxin system HicA family toxin	NA	NA	NA	NA
WP_001030484.1\|4017914_4018271_+	type II toxin-antitoxin system HicB family antitoxin	NA	NA	NA	NA
WP_001550651.1\|4018327_4019086_-	C40 family peptidase	A0A1V0DZX6	Clostridioides_phage	1.2e-19	37.7
WP_001225679.1\|4019377_4020118_+	murein L,D-transpeptidase	NA	NA	NA	NA
WP_000333380.1\|4020088_4020856_-	class II glutamine amidotransferase	NA	NA	NA	NA
WP_000284050.1\|4020960_4021539_-	D-sedoheptulose 7-phosphate isomerase	A0A067XQR2	Caulobacter_phage	1.1e-14	32.0
WP_000973092.1\|4021778_4024223_+	acyl-CoA dehydrogenase FadE	NA	NA	NA	NA
WP_000532698.1\|4024265_4024739_-	C-lysozyme inhibitor	NA	NA	NA	NA
WP_000015781.1\|4024892_4025663_+	2-oxoglutaramate amidase	NA	NA	NA	NA
WP_153269353.1\|4027835_4029248_-	RHS repeat protein	A0A2H4JHK7	uncultured_Caudovirales_phage	1.5e-23	46.5
WP_001550647.1\|4032411_4034553_-	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	1.8e-25	24.8
WP_001550646.1\|4035979_4036480_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_001521869.1\|4036514_4036739_+	hypothetical protein	NA	NA	NA	NA
WP_001550644.1\|4036789_4038265_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_001521866.1\|4038271_4038685_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_001521865.1\|4038688_4040539_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_000348804.1\|4040502_4041585_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_001550643.1\|4041609_4042890_+	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA
WP_001080149.1\|4042886_4043411_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_000246418.1\|4043413_4044745_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
4055323:4055339	attR	NA	NA	NA	NA

DBSCAN-SWA_8

4298413 : 4380405

Enterobacteria_phage(38.0%)

tail,terminase,tRNA,integrase,head,portal,holin

attL 4341052:4341066|attR 4382386:4382400

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_021519915.1\|4298413_4299100_-\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA
WP_001303782.1\|4299499_4299640_-	hypothetical protein	NA	NA	NA	NA
WP_001194358.1\|4299735_4300452_+	two-component system response regulator ArcA	NA	NA	NA	NA
WP_000920350.1\|4300511_4301864_-	cell envelope integrity protein CreD	NA	NA	NA	NA
WP_001219577.1\|4301921_4303346_-	two-component system sensor histidine kinase CreC	Q8QKV7	Ectocarpus_siliculosus_virus	1.2e-09	20.9
WP_001188679.1\|4303345_4304035_-	two-component system response regulator CreB	W8CYM9	Bacillus_phage	8.8e-30	35.3
WP_000875487.1\|4304047_4304521_-	protein CreA	NA	NA	NA	NA
WP_000371666.1\|4304731_4305601_+	MDR efflux pump AcrAB transcriptional activator RobA	NA	NA	NA	NA
WP_000942344.1\|4305597_4306245_-	2,3-diphosphoglycerate-dependent phosphoglycerate mutase GpmB	NA	NA	NA	NA
WP_001545810.1\|4306296_4306812_+	inosine/xanthosine triphosphatase	NA	NA	NA	NA
WP_000068678.1\|4306805_4307132_-	trp operon repressor	NA	NA	NA	NA
WP_000409451.1\|4307221_4309159_-	murein transglycosylase	A0A1P8CWQ1	Bacillus_phage	4.0e-11	34.8
WP_000046743.1\|4309369_4311037_+	energy-dependent translational throttle protein EttA	A0A1V0SKJ1	Klosneuvirus	8.3e-42	26.2
WP_000566334.1\|4311191_4312079_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_000023622.1\|4312212_4313223_+	aldo/keto reductase	NA	NA	NA	NA
WP_001550574.1\|4313242_4314040_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_001140838.1\|4314065_4314482_+	SRPBCC family protein	NA	NA	NA	NA
WP_000848792.1\|4314639_4314852_+	DUF1471 domain-containing protein	NA	NA	NA	NA
WP_071591563.1\|4314900_4315086_+	hypothetical protein	NA	NA	NA	NA
WP_000093813.1\|4315311_4316544_-	multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR	A0A0C5K935	Enterococcus_phage	2.1e-82	42.6
WP_001029698.1\|4316564_4317947_-	DNA repair protein RadA	NA	NA	NA	NA
WP_001132956.1\|4317995_4318964_-	phosphoserine phosphatase	NA	NA	NA	NA
WP_001550573.1\|4319069_4319714_+	YtjB family periplasmic protein	NA	NA	NA	NA
WP_001550572.1\|4319741_4320758_+	lipoate--protein ligase LplA	NA	NA	NA	NA
WP_000566139.1\|4320789_4321053_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000224877.1\|4321213_4321933_-	purine-nucleoside phosphorylase	NA	NA	NA	NA
WP_000816471.1\|4321989_4323213_-	phosphopentomutase	NA	NA	NA	NA
WP_000477829.1\|4323264_4324587_-	thymidine phosphorylase	A0A0H3UZD4	Geobacillus_virus	5.2e-79	39.8
WP_001550571.1\|4324664_4325444_-	deoxyribose-phosphate aldolase	NA	NA	NA	NA
WP_001550570.1\|4325701_4327252_+	YjjI family glycine radical enzyme	NA	NA	NA	NA
WP_001550569.1\|4327223_4328087_+	YjjW family glycine radical enzyme activase	NA	NA	NA	NA
WP_001550568.1\|4328120_4328900_-	metal-dependent hydrolase	NA	NA	NA	NA
WP_001550567.1\|4328896_4329970_-	patatin family protein	NA	NA	NA	NA
WP_000490275.1\|4330091_4330253_-	DUF1328 domain-containing protein	A0A0N7CBR2	Salmonella_phage	1.8e-10	64.2
WP_001295748.1\|4330379_4330985_-	molecular chaperone OsmY	NA	NA	NA	NA
WP_000202563.1\|4331377_4332964_-	peptide chain release factor 3	D0R0F5	Streptococcus_phage	2.4e-30	25.2
WP_001217539.1\|4333183_4333432_+	DinI-like family protein	A5LH55	Enterobacteria_phage	1.1e-38	100.0
WP_120795384.1\|4333858_4333972_+	Rac prophage; protein YnaM	A0A1C9IHU6	Salmonella_phage	8.4e-07	80.6
WP_000086527.1\|4334661_4335252_+	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	1.6e-24	38.8
WP_169062409.1\|4335479_4335773_-	hypothetical protein	NA	NA	NA	NA
WP_060579084.1\|4335783_4336488_-\|tail	tail fiber domain-containing protein	A0A1X7QGH6	Escherichia_phage	1.2e-58	61.7
WP_001550853.1\|4336497_4336779_-	hypothetical protein	A0A1X7QHA1	Escherichia_phage	1.2e-17	48.9
4341052:4341066	attL	NA	NA	NA	NA
WP_071591506.1\|4343444_4344077_-\|tail	tail assembly protein	A0A2R9YJH6	Escherichia_phage	8.5e-96	99.0
WP_000194780.1\|4344013_4344757_-\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	2.5e-147	96.8
WP_001563779.1\|4344761_4345460_-\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	4.7e-132	98.3
WP_001563778.1\|4345459_4345789_-\|tail	phage tail protein	A0A0K2FIE9	Enterobacteria_phage	1.4e-57	98.2
WP_001563777.1\|4345785_4348365_-\|tail	phage tail tape measure protein	A0A2R9YJM8	Escherichia_phage	0.0e+00	88.1
WP_000459472.1\|4348357_4348792_-\|tail	phage tail assembly protein T	A0A0K2FJB3	Enterobacteria_phage	3.8e-63	98.3
WP_001563776.1\|4348773_4349187_-\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	5.4e-67	93.6
WP_001563775.1\|4349202_4349943_-\|tail	phage tail protein	A0A2I6TC77	Escherichia_phage	2.5e-131	98.8
WP_169062410.1\|4352812_4353145_-\|head	head decoration protein	C6ZCY1	Enterobacteria_phage	2.7e-53	98.2
WP_001563772.1\|4354455_4356057_-\|portal	phage portal protein	A0A0K2FJC0	Enterobacteria_phage	4.2e-309	99.1
WP_000198149.1\|4356053_4356260_-\|head,tail	Lambda prophage-derived head-to-tail joining protein W	A0A2R9YJL2	Escherichia_phage	5.8e-30	100.0
WP_000867489.1\|4358157_4358703_-\|terminase	terminase small subunit	A0A0K2FIG2	Enterobacteria_phage	1.2e-79	83.3
WP_001307652.1\|4359090_4359285_+	YlcI/YnfO family protein	A0A0K2FIR8	Escherichia_phage	9.7e-27	96.8
WP_000548594.1\|4359535_4359742_-	hypothetical protein	A0A0K2FJ18	Enterobacteria_phage	2.6e-22	80.9
WP_001443523.1\|4360383_4360539_-	hypothetical protein	NA	NA	NA	NA
WP_071528545.1\|4360687_4360876_-	cold-shock protein	NA	NA	NA	NA
WP_001071778.1\|4361471_4361969_-	DUF2514 domain-containing protein	NA	NA	NA	NA
WP_001101173.1\|4361965_4362499_-	lysozyme	K7PLY1	Enterobacteria_phage	1.4e-96	93.8
WP_001557934.1\|4362612_4362873_+	hypothetical protein	NA	NA	NA	NA
WP_072201599.1\|4362820_4363372_-	YdfR family protein	Q08JA0	Stx2-converting_phage	1.3e-36	51.1
WP_000839581.1\|4363376_4363592_-\|holin	class II holin family protein	A5LH82	Enterobacteria_phage	7.9e-30	90.1
WP_000066482.1\|4364345_4364561_-	cold shock-like protein CspB	A0A1W6JNX5	Morganella_phage	2.6e-25	76.5
WP_001589622.1\|4364863_4365076_+	cold shock-like protein CspF	NA	NA	NA	NA
WP_122990953.1\|4365130_4365220_+	hypothetical protein	NA	NA	NA	NA
WP_001589621.1\|4365497_4366250_-	antitermination protein	K7PGU5	Enterobacteria_phage	7.1e-134	97.6
WP_001589620.1\|4366263_4367253_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	4.7e-194	99.4
WP_001072669.1\|4367260_4368076_-	KilA-N domain-containing protein	U5P4K5	Shigella_phage	8.5e-149	99.3
WP_000767110.1\|4368238_4368634_-	RusA family crossover junction endodeoxyribonuclease	A0A0P0ZD39	Stx2-converting_phage	5.7e-66	98.4
WP_000210181.1\|4368630_4368957_-	LexA family transcriptional regulator	U5P451	Shigella_phage	9.2e-54	100.0
WP_021518588.1\|4368953_4369607_-	phage N-6-adenine-methyltransferase	S5M7S1	Escherichia_phage	4.3e-127	99.1
WP_001305611.1\|4369606_4370101_-	PerC family transcriptional regulator	A0A291AWV6	Escherichia_phage	1.5e-87	99.4
WP_060579161.1\|4370097_4371039_-	helix-turn-helix domain-containing protein	S5FM81	Shigella_phage	1.2e-135	95.8
WP_071789194.1\|4371028_4371208_-	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	4.6e-15	68.5
WP_060579163.1\|4371383_4371941_-	hypothetical protein	K7PGU3	Enterobacteria_phage	1.0e-92	93.5
WP_000205494.1\|4371978_4372179_-	cell division protein	NA	NA	NA	NA
WP_000450737.1\|4372276_4372903_+	LexA family transcriptional regulator	K7PM82	Enterobacteria_phage	1.9e-47	48.8
WP_000357060.1\|4373270_4373774_-	hypothetical protein	A0A077K9U2	Edwardsiella_phage	1.2e-31	47.6
WP_000135680.1\|4374235_4374598_+	hypothetical protein	Q8SBF8	Shigella_phage	8.6e-61	100.0
WP_000081305.1\|4374663_4375488_+	YfdQ family protein	Q8SBF9	Shigella_phage	2.3e-149	98.9
WP_000008178.1\|4375615_4376152_+	5'-deoxynucleotidase	A0A0P0ZCH9	Stx2-converting_phage	2.2e-100	99.4
WP_001242716.1\|4376142_4376505_+	hypothetical protein	K7PH61	Enterobacteria_phage	5.8e-65	98.3
WP_023154558.1\|4376504_4377125_+	DUF551 domain-containing protein	A5LH60	Enterobacteria_phage	2.5e-116	93.2
WP_029402496.1\|4377124_4377373_+	helix-turn-helix domain-containing protein	A5LH59	Enterobacteria_phage	1.7e-31	98.4
WP_001218280.1\|4379181_4380405_-\|integrase	site-specific integrase	A0A291AWU1	Escherichia_phage	1.5e-234	97.8
4382386:4382400	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP051750

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP051749

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection