CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP053575	Citrobacter sp. TSA-1 plasmid unnamed2, complete sequence	0 crisprs	NA	0	0
NZ_CP053573	Citrobacter sp. TSA-1 chromosome, complete genome	2 crisprs	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG,WYL	18	6
NZ_CP053574	Citrobacter sp. TSA-1 plasmid unnamed1, complete sequence	0 crisprs	NA	0	5

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP053573_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053573_1

1032126-1033313

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

19 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NZ_CP053573_1

>merge|NZ_CP053573|1|1032126-1033313|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGCATAGAAAACCCGAGTACGCCGATCACCTGGGGTGTTCCCCGCGCCAGCGGGGATAAACCGAAATATTTCCTGATGCTGTTACCGTTGAATATGTGTTCCCCGCGCCAGCGGGGATAAACCGCAAATATTAGATGCAACAGGCGAACATATTATGTGTTCCCCGCGCCAGCGGGGATAAACCGCCGGAACATCATCACTATCATCATTAAAAAACGTGTTCCCCGCGCCAGCGGGGATAAACCGTGGTCGCCGGGCACTCCCTGAGATGATGCGTTGTGTTCCCCGCGCCAGCGGGGATAAACCGCACCCCTCAGTAATGTCGATCGGCGTGATAAAGTGTTCCCCGCGCCAGCGGGGATAAACCGCCGACTAACCCACGTCGCGATCTCGTAAAAGCGTGTTCCCCGCGCCAGCGGGGATAAACCGTCACCGTGGGTGAATGTTCCGGCGAAGTGCAGGTGTTCCCCGCGCCAGCGGGGATAAACCGGAGTCCGTCGAGTTGCTGGCCAGTCTGTCAGAGTGTTCCCCGCGCCAGCGGGGATAAACCGTTGTGTGCGTAGCTTTTTGCCAGGGTGAGCGCGTGTTCCCCGCGCCAGCGGGGATAAACCGAGAATTTCGCATATATTCCGGCGAATTTTCCTGTGTTCCCCGCGCCAGCGGGGATAAACCGCAAATGACGGGAACCGGATTCGAAGGGACCAGGTGTTCCCCGCGCCAGCGGGGATAAACCGCAGTCCACGCGGTGAGAATAACGAGTTCTGGAGTGTTCCCCGCGCCAGCGGGGATAAACCAGAACCAGTGATGGGGGCGCAGGTTGATGGACTGTGTTCCCCGCGCCAGCGGGGATAAACCGAACGCGACGGCCATTTATTCGCGGAAATGGAGGTGTTCCCCGCGCCAGCGGGGATAAACCGCATCATCAACCAGACCTCAGGGCGCATTGACAGTGTTCCCCGCGCCAGCGGGGATAAACCGACAACACGCAAACCCTGCAAGTTCCTGTGTGTGTGTTCCCCGCGCCAGCGGGGATAAACCGGCTTCACCCAGTGCCACTTCTTCGCAGGAATCGTGTTCCCCGCGCCAGCGGGGATAAACCGATATACCTCAGCTCTATATAGTGTTCTGCCCTGTGTTCCCCGCGTCAGCGGGGATAATCCA

>NZ_CP053573|1|1|1032126-1033252|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CATAGAAAACCCGAGTACGCCGATCACCTGGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAATATTTCCTGATGCTGTTACCGTTGAATAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAAATATTAGATGCAACAGGCGAACATATTAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGGAACATCATCACTATCATCATTAAAAAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGGTCGCCGGGCACTCCCTGAGATGATGCGTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CACCCCTCAGTAATGTCGATCGGCGTGATAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGACTAACCCACGTCGCGATCTCGTAAAAGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCACCGTGGGTGAATGTTCCGGCGAAGTGCAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAGTCCGTCGAGTTGCTGGCCAGTCTGTCAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGTGTGCGTAGCTTTTTGCCAGGGTGAGCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGAATTTCGCATATATTCCGGCGAATTTTCCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAAATGACGGGAACCGGATTCGAAGGGACCAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGTCCACGCGGTGAGAATAACGAGTTCTGGA
GTGTTCCCCGCGCCAGCGGGGATAAACCA	GAACCAGTGATGGGGGCGCAGGTTGATGGACT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACGCGACGGCCATTTATTCGCGGAAATGGAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CATCATCAACCAGACCTCAGGGCGCATTGACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACAACACGCAAACCCTGCAAGTTCCTGTGTGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCTTCACCCAGTGCCACTTCTTCGCAGGAATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG

>NZ_CP053573|1|1|1032126-1033313|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CATAGAAAACCCGAGTACGCCGATCACCTGGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAATATTTCCTGATGCTGTTACCGTTGAATAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAAATATTAGATGCAACAGGCGAACATATTAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGGAACATCATCACTATCATCATTAAAAAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGGTCGCCGGGCACTCCCTGAGATGATGCGTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CACCCCTCAGTAATGTCGATCGGCGTGATAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGACTAACCCACGTCGCGATCTCGTAAAAGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCACCGTGGGTGAATGTTCCGGCGAAGTGCAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAGTCCGTCGAGTTGCTGGCCAGTCTGTCAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGTGTGCGTAGCTTTTTGCCAGGGTGAGCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGAATTTCGCATATATTCCGGCGAATTTTCCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAAATGACGGGAACCGGATTCGAAGGGACCAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGTCCACGCGGTGAGAATAACGAGTTCTGGA
GTGTTCCCCGCGCCAGCGGGGATAAACCA	GAACCAGTGATGGGGGCGCAGGTTGATGGACT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACGCGACGGCCATTTATTCGCGGAAATGGAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CATCATCAACCAGACCTCAGGGCGCATTGACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACAACACGCAAACCCTGCAAGTTCCTGTGTGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCTTCACCCAGTGCCACTTCTTCGCAGGAATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATATACCTCAGCTCTATATAGTGTTCTGCCCT
GTGTTCCCCGCGTCAGCGGGGATAATCCA

>NZ_CP053573|1|1|1032126-1033313|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CATAGAAAACCCGAGTACGCCGATCACCTGGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAATATTTCCTGATGCTGTTACCGTTGAATAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAAATATTAGATGCAACAGGCGAACATATTAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGGAACATCATCACTATCATCATTAAAAAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGGTCGCCGGGCACTCCCTGAGATGATGCGTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CACCCCTCAGTAATGTCGATCGGCGTGATAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCGACTAACCCACGTCGCGATCTCGTAAAAGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCACCGTGGGTGAATGTTCCGGCGAAGTGCAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GAGTCCGTCGAGTTGCTGGCCAGTCTGTCAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGTGTGCGTAGCTTTTTGCCAGGGTGAGCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGAATTTCGCATATATTCCGGCGAATTTTCCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAAATGACGGGAACCGGATTCGAAGGGACCAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGTCCACGCGGTGAGAATAACGAGTTCTGGA
GTGTTCCCCGCGCCAGCGGGGATAAACCA	GAACCAGTGATGGGGGCGCAGGTTGATGGACT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACGCGACGGCCATTTATTCGCGGAAATGGAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CATCATCAACCAGACCTCAGGGCGCATTGACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACAACACGCAAACCCTGCAAGTTCCTGTGTGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCTTCACCCAGTGCCACTTCTTCGCAGGAATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATATACCTCAGCTCTATATAGTGTTCTGCCCT
GTGTTCCCCGCGTCAGCGGGGATAATCCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053573.1\|WP_095715346.1\|1036993_1037599_+\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NZ_CP053573.1\|WP_046274804.1\|1031747_1032032_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_CP053573.1\|WP_003034163.1\|1038185_1038497_+\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
NZ_CP053573.1\|WP_016154216.1\|1020996_1022709_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
NZ_CP053573.1\|WP_095715734.1\|1028444_1029533_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	cd09646_cas7_CAS-I-E	gnl\|CDD\|378153
NZ_CP053573.1\|WP_016157335.1\|1022724_1023459_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP053573.1\|WP_095715732.1\|1023650_1026350_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|182031
NZ_CP053573.1\|WP_016154211.1\|1037646_1037970_+\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
NZ_CP053573.1\|WP_095715736.1\|1030828_1031743_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP053573.1\|WP_095715735.1\|1029535_1030210_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|273842
NZ_CP053573.1\|WP_095715733.1\|1026444_1027959_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|236613
NZ_CP053573.1\|WP_049282616.1\|1033347_1034394_-\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NZ_CP053573.1\|WP_016154213.1\|1035566_1036994_+\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP053573.1\|WP_016154210.1\|1038515_1039226_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NZ_CP053573.1\|WP_016154207.1\|1040731_1041493_+\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NZ_CP053573.1\|WP_016154208.1\|1039701_1040751_+\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NZ_CP053573.1\|WP_016154209.1\|1039225_1039705_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
NZ_CP053573.1\|WP_003034152.1\|1034648_1035557_+\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP053573.1\|WP_095715737.1\|1027963_1028434_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09670_cse2gr11_CAS-I-E	gnl\|CDD\|187801
NZ_CP053573.1\|WP_046274803.1\|1030196_1030790_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|215025

Protein	Function_ID	Function_description	E-value
NZ_CP053573.1\|WP_095715346.1\|1036993_1037599_+\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	5.85145e-147
NZ_CP053573.1\|WP_046274804.1\|1031747_1032032_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	2.87919e-59
NZ_CP053573.1\|WP_003034163.1\|1038185_1038497_+\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	3.92359e-64
NZ_CP053573.1\|WP_016154216.1\|1020996_1022709_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
NZ_CP053573.1\|WP_095715734.1\|1028444_1029533_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	2.34396e-127
NZ_CP053573.1\|WP_016157335.1\|1022724_1023459_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	4.32685e-138
NZ_CP053573.1\|WP_095715732.1\|1023650_1026350_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	0
NZ_CP053573.1\|WP_016154211.1\|1037646_1037970_+\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	1.01612e-46
NZ_CP053573.1\|WP_095715736.1\|1030828_1031743_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	1.59935e-152
NZ_CP053573.1\|WP_095715735.1\|1029535_1030210_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|273842	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is part of the ECOLI subtype CRISPR/Cas locus, and now characterized as part of the CASCADE complex of that system. It shares a small N-terminal homology region with members of several other CRISPR/Cas subtypes, and we view the families that share this region as being Cas5.	2.94286e-74
NZ_CP053573.1\|WP_095715733.1\|1026444_1027959_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|236613	PRK09693, PRK09693, Cascade antiviral complex protein; Validated.	0
NZ_CP053573.1\|WP_049282616.1\|1033347_1034394_-\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NZ_CP053573.1\|WP_016154213.1\|1035566_1036994_+\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP053573.1\|WP_016154210.1\|1038515_1039226_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	7.05166e-119
NZ_CP053573.1\|WP_016154207.1\|1040731_1041493_+\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	2.1784e-149
NZ_CP053573.1\|WP_016154208.1\|1039701_1040751_+\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NZ_CP053573.1\|WP_016154209.1\|1039225_1039705_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	2.50116e-104
NZ_CP053573.1\|WP_003034152.1\|1034648_1035557_+\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP053573.1\|WP_095715737.1\|1027963_1028434_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187801	cd09670, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	3.78425e-25
NZ_CP053573.1\|WP_046274803.1\|1030196_1030790_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|215025	smart01101, CRISPR_assoc, This domain forms an anti-parallel beta strand structure with flanking alpha helical regions.	1.2201e-58

>NZ_CP053573.1|WP_046274804.1|1031747_1032032_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMLVVVTENVPARLRGRLAVWLLEVRAGVYVGDTSRKVREMIWHQVTTLADEGNVVMAWAVNNESGFDFQTWGENRRMAVELDGLRLVSFHPS
>NZ_CP053573.1|WP_095715736.1|1030828_1031743_+|type-I-E-CRISPR-associated-endonuclease-Cas1
MVYLPLSPIPMKDRTSMIFLQYGQIDVIDGAFVLIDKTGIRTHIPVGSIACIMLEPGTRVSHAAVRLAATTGTLLVWVGEAGVRLYACGQPGGARSDRLLYQAKLALDEELRLKVVRKMFELRFGEPAPSRRSVEQLRGIKGARVRQSYALLAERYGVKWHGRRYDPKDWKKGDTVNQCISAATSCLYGITEAAVLAAGYAPAIGFVHSGKPLSFVYDIADIVKFDGVVPVAFEIAARAPVSPDKEVRLACRDIFRSQKTLARIIPLIEEVLAAGEIEIPKPFEDAQPPAIPEPVSLGDAGHRG
>NZ_CP053573.1|WP_046274803.1|1030196_1030790_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSKIFVNWRWARDPYQLHRALWQLFPDRADMSRDFLFRLEELHTGKGGVVLLQSMLSPCDAIVAQVVASKPLGFRLEKNARLRFRLRANPVKTIKDAQRRQNSRGEVKSCRVPLIDEGEQTAWLQRKLSGIAVLEQCRITQEKALFFQKNNRNGKIQPVCFDGFLTVSDTDKFNQILIQGIGPAKAMGCGLLSIA
>NZ_CP053573.1|WP_095715735.1|1029535_1030210_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MNRYLILRLAGPMQFWGLPTFEGTRPTAAFPTRSGLLGLLGACLGIRRNNKDSLQKLANSVRFAIRCDQKMVDSHPLKVTKIIDYHTVQDAREDYVGLKCHQTIQTWREYLCDASFTVAVWCLPSTDFNVEMLSEAVRKPYFTPYLGRRSCPMTEPLFVGDCQAVDPENALMNYAPTGGDIYCEEAVGSANQRFRMRDEPIISLPRQFAAREWFVIKGKRNVSE
>NZ_CP053573.1|WP_095715734.1|1028444_1029533_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MNNFINFHILISHSPSCLNRDDMNMQKDAFFGGKRRVRISSQSLKRAMRKSEYYARHLGESSIRTIHLELLRERLRKDLGERFDKALIDRTLFLLSGKPIDESEKIDADAVTPWVLGEFAWFCEQVKIGDEEGLDEKKLIKKLKEQVAAMRVNLQNGVDIALSGRMATSGMMSELGKVDGAMSIAHSITTHHVDSDIDWFTAVDDLQELGSGHLGTQEFSSGVFYRYASLNISQLQENLGSVDRSKVLEIASHLAHMLATETPNAKQRTFAAFNPADLVMVNFSDFPLSLANAFECPVKAKEGYLKPSIEAFTEYWERVSKGYGLTGPAAEFLLTGDSLPAGVAKMESLEQLKQWIRNSGEV
>NZ_CP053573.1|WP_095715737.1|1027963_1028434_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MALYRAWEQLDNGARAQLRRVSEPDELKDIPVFYRLVSSFGWDNPVNQKPLLRMVFCLTAGRNAVCHKEKEAEEKYGISVGKALANSQQRINERRVFQLLRSEWPADMVQLRRLLAHAEPILYWPDFANQLIWWSPKERRQLLEDFVIASPQKKNQ
>NZ_CP053573.1|WP_095715733.1|1026444_1027959_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDLLNDKWISVRPLHGGSPQIITLQTLLCGSQSWVLCLPRDDMELAALQLLICLVQVILPVQDYLVLRQRLSNPLSESLFTDAVSGWNEVFQLNHPDAPFMQTKGVAAKEATGMDKLLVGLTGATNCAFVNEPGQGNALCGGCTAIALFNQANNAPGFGGGFKSGLRGGSPVTTLVQGNDLRTTVWLNVLTTQHLEIFLDSELPQNDRFVWQDPIKSGEKIPAASIGLFRGLFWQPAHIELCPTIAGGICSGCGQNAEQRYDGFLKEKFSFNVEEIWPHPHSPRLLQTRKGQPEEKFLSFTTSIPSWTQVSRILVEKAAAKNVEGHRVAAVVKQAQELLRGQRLQLIIGGYRTNQASILERRHDVLVFNQGWQQFLDLVNEIVETGLNYKTALRKALYTFSVGVNTSGIKGAGVAVHESAERHYYRQSELIIPDLLASLEYENADNALEHLRRNLHQVCERLFEDATAPYIHHPKLALTLAVARRSLYKHLGALQPEGGNNNVD
>NZ_CP053573.1|WP_095715732.1|1023650_1026350_+|CRISPR-associated-helicase/endonuclease-Cas3
MANYAPYFAYWGKTSKKENIHDQGDAYHLLPYHCLDVAAVAAYWWDHSVAMRRHFCCDRLATESEIRAWLLFFTALHDLGKWDIRFQCKVCATWLELHPEDGKLKRPSLETCRHFDHGVGGLFWFIEDFQPTINHNGFLSFDEPSAHPYASWFPWIEAVTGHHGYVRQAAHISSSQYEMPHLFQSFAARDKAARWEWIKVLELLFLQPASLTLKSIPPKASTLLAGFCSVSDWLGSWRSEDTFQFCATLPKSDEALKSYFTKRYEEDAALVIERSGLLTTVSSYSGTQVLLEKGYVPRQLQILVDEIPVASGVTLIEAPTGSGKTETALAYAWKLLDNDLADSIIFALPTQATANAMLERMGTLALQIFEHPNIVLAHGNADFNPTFKALKHAGANPQGEEAWSQCCEWLSQGHKRVFLGQVGVCTIDQVLVSVLPVRHRFIRGLGTGRSVLIVDEVHAYDSYMNGLLDAVLSEQLAAGGSAILLSATLSAKQRQRLLSHGKSDSVVTRRSPLPEPYPLISWCDAQRAEQLDLQHKPEHLPPAFQLYLEALHVAELMPDSTLIERMVAAARSGAQVCIICNLVDVAQRVFRQIQAQADTDIQVMLFHARFTLIDRQKKERGVLSYFGKKGDRSCGRILVSTQVIEASLDVCFDWLITQLCPVDHLFQRLGRLHRHKENWRPAAFSVPKATVLLPDGDDYGAHNLIYSHTRVMWRTQQYIEALGDNPLVFPLAYRGWIEPIYDDAEEMNAPEWVTAGMDEYQKKEFAKRHCVRLMLDWAENTVLTDDDQNVRAVTRDGEMSLPIIPYVMTSQGKCLLNGQLVEQLDNYLLREALMLNRVGVPHHWEEVFTEKVDEDGLLWLEGNIDSGGWQYQGKRFSLTYTVETGMVRTIPAEREEEFE
>NZ_CP053573.1|WP_016157335.1|1022724_1023459_+|phosphoadenosine-phosphosulfate-reductase
MSVLDLNALNDLPKVDRILALAETNAQLEKLDAEGRVAWALENLPGEYVLSSSFGIQAAVSLHLVNQVHPDIPVILTDTGYLFPETYQFIDELTDKLKLNLQVYRAKESAAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELNAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP053573.1|WP_016154216.1|1020996_1022709_+|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKYPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAEQKLEPRHAMLLRCRLPGGVITTKQWQAIDTFAHDNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESELHAQAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGIDTFKEEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDNNWHLTLFIENGRILDYPGRPLKTGLLEIAKIHKGDFRITANQNLIIAGVPESQKAKIEKLARDHGLMNAVKPQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGCGRAMLAELGLVGKAPGRYNVHLGGNRMGTRIPRMYRENITESEILDSVDELVGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>NZ_CP053573.1|WP_049282616.1|1033347_1034394_-|aminopeptidase
MFSATRPLLAILALGACFILPAQATSSKPGDIANTQARYIATFFPGRVTGSPAEMLSADYIRQQFQQMGYSSDIRTFNSRYVYTAKNNRKNWHNVTGSTVIAAHEGKAPQQIIIMAHLDTYAAQSDADSDANLGGLTLQGIDDNAAGLGVMLELAEKLKDVPTQYGIRFIATSGEEEGKLGAENILKRMSAAEKKNTLLVINLDNLIVGDKLYFNSGKKTPEAVRKLTRDRALAIAHSRGIVASTNPGLNKNYPKGTGCCNDAEVFDNAGIAVLSVEATNWSLGKKDGYQQRAKSASFPAGNSWHDVRLDNQQHIDKALPGRIEHRSRDVVRIMLPLVKELAKAGKSS
>NZ_CP053573.1|WP_003034152.1|1034648_1035557_+|sulfate-adenylyltransferase-subunit-CysD
MDQKRLTHLRQLEAESIHIIREVAAEFSNPVMMYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFSEMYEFRDRTAKAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWHNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMIDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESNAQTLPEIIEEMLVSTTSERQGRVIDRDQAGSMELKKRQGYF
>NZ_CP053573.1|WP_016154213.1|1035566_1036994_+|sulfate-adenylyltransferase-subunit-CysN
MNTTLAQQIANEGGVEAWMVAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVNFSEETFNRIREDYLTFAEQLPGNLDIRFVPLSALEGDNVASQSASMSWYSGPTLLEVLETVEIQRIVDTQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGQRVKVLPSGVESSVARIVTFDGDLQEAHAGEAITLVLKDEIDISRGDLLLDAGEALPAVQSAAVDVVWMAEQPLSPGQSYDIKVAGKKTRARVDNVQYQIDINNLTQRDVEALPLNGIGLVNLTFDEPLVLDTYQQNPVTGGLIIIDRLTNVTVGAGLVREPIVQEHTAASQFSAFELELNALVRRHFPHWGARDLLGGK
>NZ_CP053573.1|WP_095715346.1|1036993_1037599_+|adenylyl-sulfate-kinase
MALHDENVVWHAHPVTPQQREQRHGHRGVVLWFTGLSGSGKSTVAGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVVNLMVDAGLVVLTAFISPHRAERKMVRERVGEGRFIEVFVDTPLATCELRDPKGLYKKARAGELRNFTGIDSVYEAPESPEIHLDGEQLVTNLVPQLLDLLRQEDIIRS
>NZ_CP053573.1|WP_016154211.1|1037646_1037970_+|DUF3561-family-protein
MRNSHNITITESDTFAADDETTWSLPGAVVGFIAWLLALGIPFLIYGPNTLFFFIYTWPFFLALLPVAIVAGIALHSLLKGLLLLSITCTLLVVGAMFGALFLWLLG
>NZ_CP053573.1|WP_003034163.1|1038185_1038497_+|cell-division-protein-FtsB
MGKLTLLLLALLVWLQYSLWFGKNGIHDYSRVNDDVAAQQATNAKLKARNDQLFAEIDDLNGGQEAIEERARNELSMTKPGETFYRLVPDASKRAQTAGQNNR
>NZ_CP053573.1|WP_016154210.1|1038515_1039226_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MAATLLDVCAVVPAAGFGRRMQTECPKQYLSIGNKTILEHSVDALLAHPRVTRVVIAISPGDSRFAQLPLAAHPQITVVDGGNERADSVLAGLQAAGEASWVLVHDAARPCLHQDDLARLLAISETSRTGGILAAPVRDTMKRAEPGRTDIAHTVDRTDLWHALTPQFFPRELLHDCLTRALHEGATITDEASALEYCGLHPQLVEGRADNIKVTRPEDLALAEFYLTRTTHQEKT
>NZ_CP053573.1|WP_016154209.1|1039225_1039705_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPTFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKAPK
>NZ_CP053573.1|WP_016154208.1|1039701_1040751_+|tRNA-pseudouridine(13)-synthase-TruD
MTVFDDLTYLHGKPLGHGVLKANPEDFVVVEDLGFEPDGEGEHVLVRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGNAMPDLSKFELEGCKVLEYARHKRKLRLGALKGNEFTLVLREVSERNDVEARLQAISERGVPNYFGAQRFGIGGSNLQGALRWAQSDAPVRDRNKRSFWLSAARSALFNQIVSERLKKTDFNQVVDGDALQLSGRGSWFVATQEEHTELQRRVDEKELMITAALPGSGEWGTQRDALAFEKAAVADETALQSLLLREKVDASRRAMLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAYIAE
>NZ_CP053573.1|WP_016154207.1|1040731_1041493_+|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTYDNGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLDGHKHYDTAAAVTCRILRALSREPLRTGRILNINVPDLPLDQIKGIRVTRCGSRHPADQVIPQQDPRGNTLYWIGPPGEKCDAGPDTDFAAVDEGYVSITPLHVDLTAYGAHEVVSDWLDSVGVDTQW

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Crispr_ID: NZ_CP053573_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053573_2

1060174-1060915

Orphan

Consensus_repeat	Method
TAATGGTGGTGTCAGTGGCTGTGCC	CRISPRCasFinder

13 spacers

The CRISPR arrays of NZ_CP053573_2

>merge|NZ_CP053573|2|1060174-1060915|CRISPRCasFinder
TGATGGTGGTGTCAGTGGCTGTGCCACCATAAATGGCCTGTTCACCACTGCCGTTAATGGTGGTCTCATTGGCTGTGCCCCCAATGTGGATGTACTGCTCTCCACTGTTGATGGTGGTGTCAGTGGCTGTGCCCCTATTGCTGACGTCCTGCCAGCCACCGTTGATTGTGGTGCCAGTGGCCGTGCTGTCATGGGAGACCCATTGGAAACCTCTGTTAATGGTGGTATCAATGGCTGTGCCACCACTGTTGACATACTGCTGACCATTATGGTTAATGGTGGTCTCAGTGGCTGTGCCACCATTGACGTCCTGTATGCCCCCATAGTTGATGACGGTCTCAGTGGCAGCACCACCGCTGGAGACTCGCTGCTCGCCATCTGTGTTGATGGTGGTCCCAATGGCTGTGCCACCACTGTTGACATACTGATAACCACCGCTGTTAATGGTGGTGGCAGTGACAGAGCCGCCACTGAAGACGCTTTGACTACCACCGTTAATGGTGGTGTCAGTGGCTGTGCCCCTATTGTAGACATTCTGACTGCCACCGCTAATAGTGGTGTCAGTGGCTGTGCCGCCGCTAACGATCTCCTGCTTGCCACCATTGTTGATGGAAGTGTCAGTGGCTGTGCCACCTAAGATGTACTGGTCGCCACCGTTGTTGATGGTGGTCTCAGTGGCCGAGCCCCCAACGTAGACGTCCTGCATGCCCCCATAGTTGATGACGGTCTCAGTGGCTGAGCC

>NZ_CP053573|2|2|1060174-1060915|CRISPRCasFinder
TGATGGTGGTGTCAGTGGCTGTGCC	ACCATAAATGGCCTGTTCACCACTGCCGT
TAATGGTGGTCTCATTGGCTGTGCC	CCCAATGTGGATGTACTGCTCTCCACTGT
TGATGGTGGTGTCAGTGGCTGTGCC	CCTATTGCTGACGTCCTGCCAGCCACCGT
TGATTGTGGTGCCAGTGGCCGTGCT	GTCATGGGAGACCCATTGGAAACCTCTGT
TAATGGTGGTATCAATGGCTGTGCC	ACCACTGTTGACATACTGCTGACCATTATGGT
TAATGGTGGTCTCAGTGGCTGTGCC	ACCATTGACGTCCTGTATGCCCCCATAGT
TGATGACGGTCTCAGTGGCAGCACC	ACCGCTGGAGACTCGCTGCTCGCCATCTGTGT
TGATGGTGGTCCCAATGGCTGTGCC	ACCACTGTTGACATACTGATAACCACCGCTGT
TAATGGTGGTGGCAGTGACAGAGCC	GCCACTGAAGACGCTTTGACTACCACCGT
TAATGGTGGTGTCAGTGGCTGTGCC	CCTATTGTAGACATTCTGACTGCCACCGC
TAATAGTGGTGTCAGTGGCTGTGCC	GCCGCTAACGATCTCCTGCTTGCCACCATTGT
TGATGGAAGTGTCAGTGGCTGTGCC	ACCTAAGATGTACTGGTCGCCACCGTTGT
TGATGGTGGTCTCAGTGGCCGAGCC	CCCAACGTAGACGTCCTGCATGCCCCCATAGT
TGATGACGGTCTCAGTGGCTGAGCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053573.1\|WP_046274815.1\|1049376_1050153_-\|winged-helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|226233
NZ_CP053573.1\|WP_049268531.1\|1068204_1069002_+\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|238923
NZ_CP053573.1\|WP_046274817.1\|1051478_1052657_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|237932
NZ_CP053573.1\|WP_047357871.1\|1066129_1066915_-\|winged-helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|226233
NZ_CP053573.1\|WP_016154202.1\|1067371_1067974_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|374267
NZ_CP053573.1\|WP_016154204.1\|1065617_1066130_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053573.1\|WP_046274820.1\|1055973_1056534_-\|type-1-fimbrial-protein	unknown	unknown	gnl\|CDD\|226069
NZ_CP053573.1\|WP_080859138.1\|1061193_1062363_-\|autotransporter-strand-loop-strand-O-heptosyltransferase	unknown	unknown	gnl\|CDD\|275207
NZ_CP053573.1\|WP_046274826.1\|1064523_1065015_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053573.1\|WP_095715345.1\|1048207_1048882_-\|Crp/Fnr-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223736
NZ_CP053573.1\|WP_016154200.1\|1069110_1069962_-\|iron/manganese-ABC-transporter-permease-subunit-SitD	unknown	unknown	gnl\|CDD\|224033
NZ_CP053573.1\|WP_080859140.1\|1048906_1049380_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053573.1\|WP_158083352.1\|1057465_1058020_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|99777
NZ_CP053573.1\|WP_080859137.1\|1063730_1064537_+\|winged-helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|226233
NZ_CP053573.1\|WP_016154199.1\|1069958_1070816_-\|iron/manganese-ABC-transporter-permease-subunit-SitC	unknown	unknown	gnl\|CDD\|334323
NZ_CP053573.1\|WP_052134125.1\|1055224_1055932_-\|fimbria/pilus-periplasmic-chaperone	unknown	unknown	gnl\|CDD\|225663
NZ_CP053573.1\|WP_046274816.1\|1050222_1051410_-\|HD-domain-containing-protein	unknown	unknown	gnl\|CDD\|225116
NZ_CP053573.1\|WP_046274818.1\|1052686_1055191_-\|fimbrial-biogenesis-outer-membrane-usher-protein	unknown	unknown	gnl\|CDD\|225729
NZ_CP053573.1\|WP_046274824.1\|1062600_1063398_-\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|214491
NZ_CP053573.1\|WP_047357882.1\|1047464_1048070_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP053573.1\|WP_046274815.1\|1049376_1050153_-\|winged-helix-turn-helix-domain-containing-protein	gnl\|CDD\|226233	COG3710, CadC, DNA-binding winged-HTH domains [Transcription].	4.86801e-13
NZ_CP053573.1\|WP_049268531.1\|1068204_1069002_+\|EAL-domain-containing-protein	gnl\|CDD\|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	1.32647e-71
NZ_CP053573.1\|WP_046274817.1\|1051478_1052657_-\|fimbrial-protein	gnl\|CDD\|237932	PRK15252, PRK15252, putative fimbrial-like adhesin protein.	9.15498e-10
NZ_CP053573.1\|WP_047357871.1\|1066129_1066915_-\|winged-helix-turn-helix-domain-containing-protein	gnl\|CDD\|226233	COG3710, CadC, DNA-binding winged-HTH domains [Transcription].	3.08525e-16
NZ_CP053573.1\|WP_016154202.1\|1067371_1067974_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|374267	pfam15977, HTH_46, Winged helix-turn-helix DNA binding.	2.98909e-11
NZ_CP053573.1\|WP_046274820.1\|1055973_1056534_-\|type-1-fimbrial-protein	gnl\|CDD\|226069	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion].	2.11323e-15
NZ_CP053573.1\|WP_080859138.1\|1061193_1062363_-\|autotransporter-strand-loop-strand-O-heptosyltransferase	gnl\|CDD\|275207	TIGR04414, glycosyltransferase_tibC, autotransporter strand-loop-strand O-heptosyltransferase. Both Aah (autotransporter adhesin heptosyltransferase) and TibC (tib is enterotoxigenic invasion locus B) are protein O-heptosyltransferases that act on multiple sites from repeat regions of proteins exported by autotransporters. Aah glycosylates AIDA, or autotransporter adhesin involved in diffuse adherence, TibC acts on TibA, but TibC can replace Aah. [Protein fate, Protein modification and repair].	0
NZ_CP053573.1\|WP_046274816.1\|1050222_1051410_-\|HD-domain-containing-protein	gnl\|CDD\|225116	COG2206, COG2206, c-di-GMP phosphodiesterase class II (HD-GYP domain) [Signal transduction mechanisms].	9.29537e-53
NZ_CP053573.1\|WP_016154200.1\|1069110_1069962_-\|iron/manganese-ABC-transporter-permease-subunit-SitD	gnl\|CDD\|224033	COG1108, ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components [Inorganic ion transport and metabolism].	3.24094e-73
NZ_CP053573.1\|WP_095715345.1\|1048207_1048882_-\|Crp/Fnr-family-transcriptional-regulator	gnl\|CDD\|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	3.62867e-33
NZ_CP053573.1\|WP_158083352.1\|1057465_1058020_-\|hypothetical-protein	gnl\|CDD\|99777	cd06170, LuxR_C_like, C-terminal DNA-binding domain of LuxR-like proteins. This domain contains a helix-turn-helix motif and binds DNA. Proteins belonging to this group are response regulators; some act as transcriptional activators, others as transcriptional repressors. Many are active as homodimers. Many are two domain proteins in which the DNA binding property of the C-terminal DNA binding domain is modulated by modifications of the N-terminal domain. For example in the case of Lux R which participates in the regulation of gene expression in response to fluctuations in cell-population density (quorum-sensing), a signaling molecule, the pheromone Acyl HSL (N-acyl derivatives of homoserine lactone), binds to the N-terminal domain and leads to LuxR dimerization. For others phophorylation of the N-terminal domain leads to multimerization, for example Escherichia coli NarL and Sinorhizobium melilot FixJ. NarL controls gene expression of many respiratory-related operons when environmental nitrate or nitrite is present under anerobic conditions. FixJ is involved in the transcriptional activation of nitrogen fixation genes. The group also includes small proteins which lack an N-terminal signaling domain, such as Bacillus subtilis GerE. GerE is dimeric and acts in conjunction with sigmaK as an activator or a repressor modulating the expression of various genes in particular those encoding the spore-coat. These LuxR family regulators may share a similar organization of their target binding sites. For example the LuxR dimer binds the lux box, a 20bp inverted repeat, GerE dimers bind two 12bp consensus sequences in inverted orientation having the central four bases overlap, and the NarL dimer binds two 7bp inverted repeats separated by 2 bp.	6.00336e-05
NZ_CP053573.1\|WP_080859137.1\|1063730_1064537_+\|winged-helix-turn-helix-domain-containing-protein	gnl\|CDD\|226233	COG3710, CadC, DNA-binding winged-HTH domains [Transcription].	2.62288e-15
NZ_CP053573.1\|WP_016154199.1\|1069958_1070816_-\|iron/manganese-ABC-transporter-permease-subunit-SitC	gnl\|CDD\|334323	pfam00950, ABC-3, ABC 3 transport family.	1.12585e-80
NZ_CP053573.1\|WP_052134125.1\|1055224_1055932_-\|fimbria/pilus-periplasmic-chaperone	gnl\|CDD\|225663	COG3121, FimC, P pilus assembly protein, chaperone PapD [Cell motility and secretion / Intracellular trafficking and secretion].	1.19597e-54
NZ_CP053573.1\|WP_046274818.1\|1052686_1055191_-\|fimbrial-biogenesis-outer-membrane-usher-protein	gnl\|CDD\|225729	COG3188, FimD, P pilus assembly protein, porin PapC [Cell motility and secretion / Intracellular trafficking and secretion].	1.0925e-177
NZ_CP053573.1\|WP_046274824.1\|1062600_1063398_-\|EAL-domain-containing-protein	gnl\|CDD\|214491	smart00052, EAL, Putative diguanylate phosphodiesterase. Putative diguanylate phosphodiesterase, present in a variety of bacteria.	5.06254e-51

>NZ_CP053573.1|WP_158083352.1|1057465_1058020_-|hypothetical-protein
MSHMILTKDVYLKKALSVILEQVSPARKLCIVDIESYRSLGAIFRLLKRKKLTDKHGLIFIGGKDVSSRVLEPLVTIYRKSCFMDFRKQLNDGRTHSPQYALNHITCCRDLSLLSGQEKKTLFALRDTDDTLAIARNIHLSPKTVYTYTSKIRQKFNLSSILQVRQFIFSEFVLDAETGEGLFP
>NZ_CP053573.1|WP_046274820.1|1055973_1056534_-|type-1-fimbrial-protein
MFNKTFIVAALMVSGSAFAAESTGVAGGTITFNGSVSDTTCNVVTNNGSDFTVNLSPIAVGDMGTTAGVVKTNAKDFTMNLKNCSAASDEAKTLKITFSSSNLSDDAKYLKNYSDNGAEGVGIALTKDGNTAVPFDTAFDTGLSSANAATEDGVTLTMYANYYNYGGAAVTTGKVVTDATYSFSYD
>NZ_CP053573.1|WP_052134125.1|1055224_1055932_-|fimbria/pilus-periplasmic-chaperone
MKTLIFFLAATFISMNASASVVINETRVIYPASAKFVSVQLVNDSEQTHLVQSWIDEGDASAAPEKVKVPFSLLPPVVKMSGHAGQALKISAMNTQSLPKDRESVFWLNVLDVPPVPEGSGDSYLQVAIRNRIKLFYRPDVLSDLDSSVAEKITVSTSGGHTCLKNNSPYYMTIPQVVTWQGGELKQSRKDNLLAETAFIPPFGCALVSSKIQSGGQYRLTWLDDYGAKRFSTIH
>NZ_CP053573.1|WP_046274818.1|1052686_1055191_-|fimbrial-biogenesis-outer-membrane-usher-protein
MKNSSLFRISLLVHSVSLAIFSYGALAEDFNSSLLVGNSADMDWSNSRLVMTPGAYDLDVFVNNVWRGKFNISVANDDKGTLLINKDDVSLLDIQGLDDIVNKSTAEKLDVNTLLHGGKSALIPGTLRLDLEVPQAFVKEYSRNWVSPQKWDQGINGLYTNYNFNYYNFHGLQNGYSDSDNLYLSLNSGLNLYGWHFLDSSSWMRYSAMNKGSWINTTRFVEKPIAAIDSVLRIGRSYTTSDYFDTVRFRGVTLNKSRQMLPDSENVYMPVIEGVATSSAVVSISQDGHIIHQTNVPPGPFAIRDLMPTGSRSDLSVEVKNTGGNIERFIVPFSSIPDMQRPGSSDYQINVGAVDMRNVDDSSHFTQVSYSRGVNNYLTASAGGIWSQDYQSLLLGGAVSVPYAGSLSASVEESQYRLPGESRRHGEKYALSWSKYFPTRTNISLASYYYRTQDYASFSDYILTKSNIKDYGGTGTSTINSKQAFSANINQPLGEQFGRLSLSAYWRDYWRGQKSSRQYNLTWSNASHGVNYSVSLRRSEVTQSYYDYETNYEGDLVSALRSRGKTENNLYFSVTIPMSIFGSGGSLSSHASVQNGKYSSSDVSMSGNMHDVDYSLMLSHDSDNDSRAADLYTNWKNDYTSMNSGATLAREYRQLSLGASGNLLAWKGGLLASPHNGRNFVIIEAPGVVNAVVNGDTSAHTNSKGIALITSATPYRQNNFHLEQDGTQKSDVDLEGNLLNVAPYEGSISWLKYKTDTRRLFTFDVQTAEGGQLPFGAVVSGAGNEEVGYVAQGSQIFIKSETLPASLKVNISKGKTKKFCTISQPAEHAENICR
>NZ_CP053573.1|WP_046274817.1|1051478_1052657_-|fimbrial-protein
MKKLFYLMVTAIILTAIPILSAQAQSQAQSRGVTGDTCRNSGILFSSVAESDKSLNLSSAFVNSNVVEYSYTTSWSGSMTCTYGNIGIGGLAQDHLYYFTGFNGSPVYLNFNSADGESSYWIKLTSTISGDTKVTVSGIVGIHSLSYQTQYTLRAELMSAPPVGMESYTKTTTSGALSVIPAVMSGTGSGSSSPFLSSKTYAYRAWSNMMSETARKSWNTDYFIAYEKLTIQFEPKETTCNMTRDMSVKLPPAPFSVLKKNGKADGADFTIPLKCGNLAGIKTSTRNVKAWLSSNDLVSSDTSYQIMVNDETTAGGVGIAIRSRMFMGDYDEVQISSSNNMEHASQILDIAKDDDISNTQYIYLHAYYKVYNASALSTGSVVATAQIMFGYD
>NZ_CP053573.1|WP_046274816.1|1050222_1051410_-|HD-domain-containing-protein
MKISVQTVLDLLHSIMHPLSPELVHHLQRTGLICWYLGNRAGFDSATINNAWLAGMLHNIGALSKVHPFSGPHGKAFIEEHGRLGASMMSGVRFLQPVTAILETRHADALGYTQNTMLNTWHLVHLADEFELWLRGIEGDYVAQRNNIVSGFLASSPLWPSCLVEALQDASHEDGFWFRLSSPSLQQVLRVISPLNDVVLDHHDFLEVCLLISNIVDKYSSFTQTHSTSVAHVAAKLAELYGCDRYTQDKIRIAGYLHDIGKLGIPLEILEKQGKLEPDEYAQMKRHSYKTLEMLHPIEELGEIVHWAARHHERLDGSGYPFRLGAAALDIPSRIIAVADVFTAMIENRPYRQGMSSEKALIILEEEASNFRLDRDIVDLLSHNIAVLRPLVAMY
>NZ_CP053573.1|WP_046274815.1|1049376_1050153_-|winged-helix-turn-helix-domain-containing-protein
MKYLIANRVIYDSESGELVVKEPGNEQSKRLTNTANRILSLLIASPGRVLERDYLLDKVWEEAGHPGSSSSLSQYISILRKTLTSLIFIEEIIVAVPKVGFYFSPEIAVELQNDEERVSTTPLPVSLRKAATKDKKNLWLIAAIAFLLLANLWILSQKQESPRFAAEYSIGEIGSCKFTAYEDLSEEVDPQVMNIIRQLQPELEQKCARKPAQIMVYFQPSVLYGSHGRFFYSYCPTDKATAKIVYCENHYAFNWKLK
>NZ_CP053573.1|WP_080859140.1|1048906_1049380_-|hypothetical-protein
MKLMTTLVLAAVALICLLTWQLNLRSGVYFDERCFANATYVDASDNALLFKGNITFEFNKNETGVFNLSGNIDYQGRQYRLSRYITFTYHNVSGNQYRMNTTTKDIMAHDNVPEDITLLTTKIFGMEGEYVISLDKKDNNYITIANTLSPLMNCVIQ
>NZ_CP053573.1|WP_095715345.1|1048207_1048882_-|Crp/Fnr-family-transcriptional-regulator
MKRNNCVNCEECGFAELCSAYLFRQKDPLFIRNLETKKKIARGEYIYRRGEKIDALYALRSGAAKVYDTRGQLMGIVLPGQVMGVEELHIGYSQQDIQAATEIEVCVLRSDHFYEMSQLMPGFTDFIVRILSRSAQEKQQFISVLTKSDTLQKVQYFLQLLSRTYKEYGFEHLNLELPISKKELAQVLGISISTLSRALDSLKDQGIISVLNKKEITLMMSDKK
>NZ_CP053573.1|WP_047357882.1|1047464_1048070_-|hypothetical-protein
MSFVVFSDDIFFTRSAGGLMPIDSLREDNLCIIDIESFFSLHDIKHRVCNELTDGYSIIFVKGRGMLSKVLSSLEGISRTASVTEFIRYINEGRRYTVYHILTIIDYLRELRNLTHTEISVACALRRQININATSQLLHCSTKAVYQRVSALAQKMNLRYGTQIQYFLYREYTIEELQQINCMKHRPDTGLFQNNGPTPHL
>NZ_CP053573.1|WP_080859138.1|1061193_1062363_-|autotransporter-strand-loop-strand-O-heptosyltransferase
MSANFATPPEFPTCAGPEGILFDFNYGARVYLPEGKWHAILMDDDSGNILFSCDSDGGWVASTKKYYIRFRIQVFHQGEAHPILDETLDMKDKPVVIFFPTGTLGDMLGWFHYAERFRQLHRCQLECVMGQEIIDLLSAQYPEITFSTKESHRTINPYASWYVGLFFKADTLHQPVDFRKVGFHRNAGYILGVDPRECPPRLKLDAERKIAEPYVCIAAQSTNQAKYWNNGHGWAEVVAHLKSLGYRVLCIDRQAHHGQGFVWNHIPYGAEDFTGDIPLQERVDLLRHASFFIGLASGLSWLAWATDIPVVLISGFSLPNSEFYTPWRVFSSHGCNGCWDDTSVDFDHQDFLWCPHHRDTPRQYECTRLITGRQVTGMVDRLHAGLVDN
>NZ_CP053573.1|WP_046274824.1|1062600_1063398_-|EAL-domain-containing-protein
MISTNMLRKAERFFSKAGTRIRESILSAELAGAEFVPYVQPVYRAYKVAGGEVLLRIRKDGVLHFPEKYISAMESCEVINDVTCSLLSDVKTFFNGYEGALPDDFYLSFNICARQLNSPDVIEAVTDFNKTFAGRIAVLLEIVERGTMHLDDFALDAMQQLTDAGVRFAIDDFGNGSSCLKYIEHSGFSTIKMDKCLTVVSNGTLIYSAVIDSIVTLSERLQIQLVAEGVENKEQLSLLKDKGVNVFQGYLFSKPVSMHEFCKHI
>NZ_CP053573.1|WP_080859137.1|1063730_1064537_+|winged-helix-turn-helix-domain-containing-protein
MDYLISSLARYRSDDGTIWPVSDEDSVIILTATMNRLLTYLLERQGQVINRDELLDNVWDLHGLRSSNHTLNKYISEIRKHFVSTGIQAECITTVPRIGFMFNQDIDVVVMTDTLPVHESTAVTDSAGPGINRQFSAFSLKHRLTFNILLLALFVASAVIFIAGSQIPTTTTSTLKDIQTHFLFNYQNCQVYTIQKNSASFLEKKKDVFVTLARQNNIDCLDGAVFLYQASDAYIYGSKGRVFISRCTTKDKQYISCLNNYWNGYESN
>NZ_CP053573.1|WP_046274826.1|1064523_1065015_+|hypothetical-protein
MKAIKISRLCAAVSLLLVMASSIGFYMYMLKRQNGMDIDCSTIIRYNHLNPDFTATLNLVFRLDKQFSGQVVLSGYINSEGGPETVSRTIHFGYEVNRPGEISVSNMHYVKKSQDTASDEIFKHSFFYVPEGTVRQIRINPLLNGWLIENLQSPFALCVNKDR
>NZ_CP053573.1|WP_016154204.1|1065617_1066130_-|hypothetical-protein
MNFYSRTPRIQTGIILLLCFAALIVTAVYRYSKNNGQLHNLTCRSAIEIVRNTSSFRGIIDIKTGGSKGIVNIDGIIKDAENNEQTVQRMVLFTQSSYGSSPVWISQKIQISNRETAPASLIQELLPDFFLTNTSVSNVDFFALNRETYLITKEGIPYLYCQNYALPENE
>NZ_CP053573.1|WP_047357871.1|1066129_1066915_-|winged-helix-turn-helix-domain-containing-protein
MSETGNVSYLIEKIIIFTPATQSLARIDQPNQRIKLKHSASLCLLLLIQHRGQVVSQNELLEFGWGKNHRQVSFNAFYQSILSLRKSLLQLELEQPLITTIPRKGLIIQEEFNIQVIETPEESVSFTAEPLVPDVAIEELSDDTARQPLITTAEMVILAITLIICVLIMYPWQTSDNYFSGYITADKAPTDCQYYFNNDASNFSRHTAFINKNPGLCQSHKFIYITTYPESKKLSVLVCRSPMKNRQENACQSVYYPRYDS
>NZ_CP053573.1|WP_016154202.1|1067371_1067974_+|helix-turn-helix-domain-containing-protein
MFQKDIENAVVLVGDEMKKSDNAWLSLRKKRQRIDLKSDGNILFLEKGAVSVHRVENDLVMVSISAPAILGLPQMRTEVAGHYLRCDTDCEMWAMSAPNAELLFTAKNLWKHAFDILTLHLQRYFQREKLQSHRTIRELIIEHLKYIWSMEPEMRENTSVYTFILARNHISRSAIHKVLQELVSDGKIIMKRGKLSFFVC
>NZ_CP053573.1|WP_049268531.1|1068204_1069002_+|EAL-domain-containing-protein
MTNGRPENLEAQHSRLFGNPTTDTTDVRAALQNALDHNTFVLLAQPIVSTRGDESYHEILIRMLNEHGEFLSPDNFLSVARDTGLAPDIDLWVIENTLKYMRYHPLSCFSINLAPVTLCRSGIVAKITALLQEYVVIPQRIIFEITEADTLSDKEHTADTLRLLRQLGCRIAIDDFGAGFASYERLMNIEADILKIDGSFVRGIIKCEVSRYIIESFCRVAAMKGMQVVAEFVESAEIQMHLEHMNVGWLQGYHIGKPQPLFTLE
>NZ_CP053573.1|WP_016154200.1|1069110_1069962_-|iron/manganese-ABC-transporter-permease-subunit-SitD
MILTTLLEPFQFSFMVNALVISTIVAVPCALLSVFLVLKGWALMGDAMSHAVFPGIVLAWIAGIPLAIGAFIAGLFCAVATGYLDDNSRIKRDTIMGIVFSGMFGAGLVLYVSIQSEVHLDHILFGDMLGVSLSDIMQTAVITLGIALIIGLKWKDLLLHAFDPHQAKASGLNTALLHYGLLCMIALTIVATLKSVGIILSISLLIAPGAIAILMTRKFSHALWLAVAMSVITSFMGVYLSFFIDSAPAPTIVVLFSLLFVITFIYATLRDRRLENQLQLQDP
>NZ_CP053573.1|WP_016154199.1|1069958_1070816_-|iron/manganese-ABC-transporter-permease-subunit-SitC
MNWLTEPFGYQYMLNAMWVSAMVGGLCAFLSCYLMLKGWSLIGDALSHSIVPGVAGAYMLGLPFALGAFLSGGLAAGSMLFLNQRSRLKEDAIIGLIFSSFFGIGLFMVSLNPMSVNIQTIILGNILAIAPEDILQLAIIGVVSLTILFLKWKDLMVVFFDENHARSIGLNPGRLKLLFFTLLSVSTIAALQTVGAFLVICLVVTPGATAWLLTDRFPRLLTIAVALGSLTSFFGAWLSYWLDGATGGIIVVLQTLLFLLAFVFAPKHGLLANRRRARLVNKEQV

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP053573_1	1.18\|1033192\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1033192-1033223	32	MN855773	Siphoviridae sp. isolate 219, complete genome	20215-20246	1	0.969
NZ_CP053573_1	1.18\|1033192\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1033192-1033223	32	MT330372	Cronobacter phage JC01, complete genome	47767-47798	1	0.969
NZ_CP053573_1	1.18\|1033192\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1033192-1033223	32	MN693322	Marine virus AFVG_25M496, complete genome	6867-6898	3	0.906
NZ_CP053573_1	1.18\|1033192\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1033192-1033223	32	AP013452	Uncultured Mediterranean phage uvMED DNA, complete genome, group G17, isolate: uvMED-CGR-C66A-MedDCM-OCT-S44-C68	28204-28235	3	0.906
NZ_CP053573_1	1.18\|1033192\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1033192-1033223	32	AP013449	Uncultured Mediterranean phage uvMED DNA, complete genome, group G17, isolate: uvMED-CGR-C66A-MedDCM-OCT-S35-C82	15362-15393	3	0.906
NZ_CP053573_1	1.18\|1033192\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1033192-1033223	32	MT448615	Vibrio phage Marilyn, complete genome	26990-27021	4	0.875
NZ_CP053573_1	1.18\|1033192\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1033192-1033223	32	AP013448	Uncultured Mediterranean phage uvMED DNA, complete genome, group G17, isolate: uvMED-CGR-C66A-MedDCM-OCT-S29-C69	31473-31504	4	0.875
NZ_CP053573_1	1.18\|1033192\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1033192-1033223	32	AP013447	Uncultured Mediterranean phage uvMED DNA, complete genome, group G17, isolate: uvMED-CGR-C66A-MedDCM-OCT-S28-C59	29591-29622	4	0.875
NZ_CP053573_1	1.18\|1033192\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1033192-1033223	32	AP013446	Uncultured Mediterranean phage uvMED DNA, complete genome, group G17, isolate: uvMED-CGR-C66A-MedDCM-OCT-S24-C64	19038-19069	4	0.875
NZ_CP053573_1	1.18\|1033192\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1033192-1033223	32	AP013450	Uncultured Mediterranean phage uvMED DNA, complete genome, group G17, isolate: uvMED-CGR-C66A-MedDCM-OCT-S36-C74	26323-26354	4	0.875
NZ_CP053573_1	1.18\|1033192\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1033192-1033223	32	JF412295	EBPR podovirus 2, partial sequence	4230-4261	4	0.875
NZ_CP053573_1	1.18\|1033192\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1033192-1033223	32	LC553736	Salmonella phage SAP012 DNA, complete sequence	15973-16004	4	0.875
NZ_CP053573_1	1.18\|1033192\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1033192-1033223	32	NC_023555	Edwardsiella phage eiAU-183, complete genome	14673-14704	5	0.844
NZ_CP053573_1	1.18\|1033192\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1033192-1033223	32	MF476925	Klebsiella phage YMC16/01/N133_KPN_BP, complete genome	8514-8545	5	0.844
NZ_CP053573_1	1.18\|1033192\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1033192-1033223	32	NC_042029	Edwardsiella phage eiAU, complete genome	14672-14703	5	0.844
NZ_CP053573_1	1.18\|1033192\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1033192-1033223	32	NC_048198	Erwinia phage vB_EhrS_59, complete genome	41019-41050	5	0.844
NZ_CP053573_2	2.10\|1060694\|29\|NZ_CP053573\|CRISPRCasFinder	1060694-1060722	29	NZ_CP030830	Neorhizobium sp. NCHU2750 plasmid pNCHU2750c, complete sequence	370866-370894	5	0.828
NZ_CP053573_2	2.12\|1060805\|29\|NZ_CP053573\|CRISPRCasFinder	1060805-1060833	29	NZ_CP020898	Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRetBra5b, complete sequence	324631-324659	5	0.828
NZ_CP053573_2	2.12\|1060805\|29\|NZ_CP053573\|CRISPRCasFinder	1060805-1060833	29	NZ_CP021027	Rhizobium sp. TAL182 plasmid pRetTAL182c, complete sequence	235084-235112	5	0.828
NZ_CP053573_2	2.12\|1060805\|29\|NZ_CP053573\|CRISPRCasFinder	1060805-1060833	29	NZ_CP013633	Rhizobium sp. N324 plasmid pRspN324c, complete sequence	242243-242271	5	0.828
NZ_CP053573_2	2.12\|1060805\|29\|NZ_CP053573\|CRISPRCasFinder	1060805-1060833	29	NZ_CP013555	Rhizobium phaseoli strain N931 plasmid pRphaN931c, complete sequence	263062-263090	5	0.828
NZ_CP053573_2	2.12\|1060805\|29\|NZ_CP053573\|CRISPRCasFinder	1060805-1060833	29	NZ_CP020950	Rhizobium sp. CIAT894 plasmid pRheCIAT894c, complete sequence	263450-263478	5	0.828
NZ_CP053573_2	2.12\|1060805\|29\|NZ_CP053573\|CRISPRCasFinder	1060805-1060833	29	NZ_CP013587	Rhizobium phaseoli strain N161 plasmid pRphaN161b, complete sequence	210607-210635	5	0.828
NZ_CP053573_2	2.12\|1060805\|29\|NZ_CP053573\|CRISPRCasFinder	1060805-1060833	29	NZ_CP013598	Rhizobium sp. N741 plasmid pRspN741c, complete sequence	248838-248866	5	0.828
NZ_CP053573_2	2.12\|1060805\|29\|NZ_CP053573\|CRISPRCasFinder	1060805-1060833	29	NZ_CP013561	Rhizobium phaseoli strain N841 plasmid pRphaN841d, complete sequence	244513-244541	5	0.828
NZ_CP053573_2	2.12\|1060805\|29\|NZ_CP053573\|CRISPRCasFinder	1060805-1060833	29	NZ_CP013578	Rhizobium phaseoli strain N671 plasmid pRphaN671d, complete sequence	268008-268036	5	0.828
NZ_CP053573_2	2.12\|1060805\|29\|NZ_CP053573\|CRISPRCasFinder	1060805-1060833	29	NZ_CP013550	Rhizobium phaseoli strain R611 plasmid pRetR611c, complete sequence	232989-233017	5	0.828
NZ_CP053573_2	2.12\|1060805\|29\|NZ_CP053573\|CRISPRCasFinder	1060805-1060833	29	NZ_CP013530	Rhizobium phaseoli strain R723 plasmid pRphaR723c, complete sequence	232988-233016	5	0.828
NZ_CP053573_2	2.12\|1060805\|29\|NZ_CP053573\|CRISPRCasFinder	1060805-1060833	29	NZ_CP013535	Rhizobium phaseoli strain R650 plasmid pRphaR650c, complete sequence	232989-233017	5	0.828
NZ_CP053573_2	2.12\|1060805\|29\|NZ_CP053573\|CRISPRCasFinder	1060805-1060833	29	NZ_CP013540	Rhizobium phaseoli strain R630 plasmid pRphaR630c, complete sequence	252519-252547	5	0.828
NZ_CP053573_2	2.12\|1060805\|29\|NZ_CP053573\|CRISPRCasFinder	1060805-1060833	29	NZ_CP013544	Rhizobium phaseoli strain R620 plasmid pRphaR620b, complete sequence	180575-180603	5	0.828
NZ_CP053573_2	2.12\|1060805\|29\|NZ_CP053573\|CRISPRCasFinder	1060805-1060833	29	NZ_CP013566	Rhizobium phaseoli strain N831 plasmid pRphaN831c, complete sequence	263063-263091	5	0.828
NZ_CP053573_2	2.12\|1060805\|29\|NZ_CP053573\|CRISPRCasFinder	1060805-1060833	29	NZ_CP013502	Rhizobium esperanzae strain N561 plasmid pRspN561b, complete sequence	248760-248788	5	0.828
NZ_CP053573_2	2.12\|1060805\|29\|NZ_CP053573\|CRISPRCasFinder	1060805-1060833	29	NZ_CP013583	Rhizobium phaseoli strain N261 plasmid pRphaN261c, complete sequence	232988-233016	5	0.828
NZ_CP053573_2	2.12\|1060805\|29\|NZ_CP053573\|CRISPRCasFinder	1060805-1060833	29	NZ_CP013508	Rhizobium sp. N1341 plasmid pRspN1341c, complete sequence	248838-248866	5	0.828
NZ_CP053573_2	2.12\|1060805\|29\|NZ_CP053573\|CRISPRCasFinder	1060805-1060833	29	NZ_CP013519	Rhizobium sp. N113 plasmid pRspN113b, complete sequence	248837-248865	5	0.828
NZ_CP053573_2	2.12\|1060805\|29\|NZ_CP053573\|CRISPRCasFinder	1060805-1060833	29	NZ_CP013572	Rhizobium phaseoli strain N771 plasmid pRphaN671d, complete sequence	268008-268036	5	0.828
NZ_CP053573_2	2.12\|1060805\|29\|NZ_CP053573\|CRISPRCasFinder	1060805-1060833	29	NZ_CP021125	Rhizobium sp. Kim5 plasmid pRetKim5a, complete sequence	236809-236837	5	0.828
NZ_CP053573_2	2.12\|1060805\|29\|NZ_CP053573\|CRISPRCasFinder	1060805-1060833	29	NZ_CP013492	Rhizobium sp. N6212 plasmid pRspN6212b, complete sequence	251400-251428	5	0.828
NZ_CP053573_2	2.12\|1060805\|29\|NZ_CP053573\|CRISPRCasFinder	1060805-1060833	29	NZ_CP013514	Rhizobium sp. N1314 plasmid pRspN1314c, complete sequence	244513-244541	5	0.828
NZ_CP053573_2	2.12\|1060805\|29\|NZ_CP053573\|CRISPRCasFinder	1060805-1060833	29	NZ_CP013497	Rhizobium sp. N621 plasmid pRspN621b, complete sequence	251400-251428	5	0.828
NZ_CP053573_2	2.12\|1060805\|29\|NZ_CP053573\|CRISPRCasFinder	1060805-1060833	29	NZ_CP013592	Rhizobium sp. N871 plasmid pRspN871b, complete sequence	248760-248788	5	0.828
NZ_CP053573_2	2.12\|1060805\|29\|NZ_CP053573\|CRISPRCasFinder	1060805-1060833	29	CP007643	Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803b, complete sequence	295245-295273	5	0.828
NZ_CP053573_2	2.12\|1060805\|29\|NZ_CP053573\|CRISPRCasFinder	1060805-1060833	29	NC_010996	Rhizobium etli CIAT 652 plasmid pB, complete sequence	229807-229835	5	0.828
NZ_CP053573_2	2.12\|1060805\|29\|NZ_CP053573\|CRISPRCasFinder	1060805-1060833	29	NZ_CP013604	Rhizobium sp. N731 plasmid pRspN731c, complete sequence	244515-244543	5	0.828
NZ_CP053573_2	2.12\|1060805\|29\|NZ_CP053573\|CRISPRCasFinder	1060805-1060833	29	NZ_CP017243	Rhizobium etli 8C-3 plasmid pRsp8C3b, complete sequence	228490-228518	5	0.828
NZ_CP053573_2	2.12\|1060805\|29\|NZ_CP053573\|CRISPRCasFinder	1060805-1060833	29	NZ_CP034999	Rhizobium acidisoli strain FH23 plasmid pRapFH23a, complete sequence	457724-457752	5	0.828
NZ_CP053573_1	1.4\|1032338\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1032338-1032369	32	NZ_MF078635	Acinetobacter pittii strain HGSA535 plasmid pLS535, complete sequence	2806-2837	6	0.812
NZ_CP053573_1	1.4\|1032338\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1032338-1032369	32	NZ_CP046298	Acinetobacter lwoffii strain FDAARGOS_552 plasmid unnamed3, complete sequence	2876-2907	6	0.812
NZ_CP053573_1	1.4\|1032338\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1032338-1032369	32	NZ_CP031999	Acinetobacter haemolyticus strain INNSZ174 plasmid pAhaemINNSZ174c, complete sequence	1624-1655	6	0.812
NZ_CP053573_1	1.15\|1033009\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1033009-1033040	32	NZ_CP013419	Burkholderia sp. MSMB0266 plasmid pMSMB0266, complete sequence	146590-146621	6	0.812
NZ_CP053573_1	1.18\|1033192\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1033192-1033223	32	MN694239	Marine virus AFVG_250M451, complete genome	34598-34629	6	0.812
NZ_CP053573_2	2.12\|1060805\|29\|NZ_CP053573\|CRISPRCasFinder	1060805-1060833	29	MT536174	Stenotrophomonas phage vB_SmaS-AXL_3, complete genome	15804-15832	6	0.793
NZ_CP053573_1	1.3\|1032277\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1032277-1032308	32	MK629528	Escherichia phage Lidtsur, complete genome	3807-3838	7	0.781
NZ_CP053573_1	1.4\|1032338\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1032338-1032369	32	MK416009	Klebsiella phage ST11-OXA245phi3.1, complete genome	21793-21824	7	0.781
NZ_CP053573_1	1.4\|1032338\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1032338-1032369	32	MK422449	Klebsiella phage ST512-KPC3phi13.2, complete genome	20769-20800	7	0.781
NZ_CP053573_1	1.4\|1032338\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1032338-1032369	32	MK416020	Klebsiella phage ST11-VIM1phi8.4, complete genome	11193-11224	7	0.781
NZ_CP053573_1	1.4\|1032338\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1032338-1032369	32	MK433580	Klebsiella phage ST11-OXA48phi15.3, complete genome	11503-11534	7	0.781
NZ_CP053573_1	1.4\|1032338\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1032338-1032369	32	MK422454	Klebsiella phage ST340-VIM1phi10.2, complete genome	21793-21824	7	0.781
NZ_CP053573_1	1.4\|1032338\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1032338-1032369	32	MK433582	Klebsiella phage ST258-KPC3phi16.2, complete genome	11503-11534	7	0.781
NZ_CP053573_1	1.7\|1032521\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1032521-1032552	32	NZ_CP049751	Rhodococcus fascians A21d2 plasmid unnamed2, complete sequence	8602-8633	7	0.781
NZ_CP053573_1	1.7\|1032521\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1032521-1032552	32	NZ_CP045327	Mycobacterium sp. THAF192 plasmid pTHAF192_b, complete sequence	35788-35819	7	0.781
NZ_CP053573_1	1.8\|1032582\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1032582-1032613	32	NZ_CP013110	Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence	691444-691475	7	0.781
NZ_CP053573_1	1.8\|1032582\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1032582-1032613	32	NZ_CP013054	Sinorhizobium americanum CCGM7 plasmid C, complete sequence	1691120-1691151	7	0.781
NZ_CP053573_1	1.18\|1033192\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1033192-1033223	32	KT997870	Uncultured Mediterranean phage uvDeep-CGR2-AD3-C191, complete genome	5074-5105	7	0.781
NZ_CP053573_2	2.3\|1060307\|29\|NZ_CP053573\|CRISPRCasFinder	1060307-1060335	29	NZ_CP030772	Streptomyces sp. YIM 121038 plasmid pSSP121038, complete sequence	324664-324692	7	0.759
NZ_CP053573_2	2.3\|1060307\|29\|NZ_CP053573\|CRISPRCasFinder	1060307-1060335	29	NZ_CP030772	Streptomyces sp. YIM 121038 plasmid pSSP121038, complete sequence	375574-375602	7	0.759
NZ_CP053573_2	2.3\|1060307\|29\|NZ_CP053573\|CRISPRCasFinder	1060307-1060335	29	NZ_CP030772	Streptomyces sp. YIM 121038 plasmid pSSP121038, complete sequence	765097-765125	7	0.759
NZ_CP053573_2	2.3\|1060307\|29\|NZ_CP053573\|CRISPRCasFinder	1060307-1060335	29	NZ_CP040096	Pantoea sp. SO10 plasmid unnamed1, complete sequence	369159-369187	7	0.759
NZ_CP053573_2	2.4\|1060361\|29\|NZ_CP053573\|CRISPRCasFinder	1060361-1060389	29	NC_028655	Yersinia phage vB_YenP_AP10, complete genome	18797-18825	7	0.759
NZ_CP053573_2	2.7\|1060526\|32\|NZ_CP053573\|CRISPRCasFinder	1060526-1060557	32	NC_012855	Ralstonia pickettii 12D plasmid pRp12D01, complete sequence	379120-379151	7	0.781
NZ_CP053573_2	2.7\|1060526\|32\|NZ_CP053573\|CRISPRCasFinder	1060526-1060557	32	NZ_CP043415	Escherichia coli strain EC42405 plasmid pNTEC2-42405, complete sequence	22137-22168	7	0.781
NZ_CP053573_2	2.7\|1060526\|32\|NZ_CP053573\|CRISPRCasFinder	1060526-1060557	32	NZ_CP051656	Escherichia coli strain RM11911 plasmid pRM11911	106951-106982	7	0.781
NZ_CP053573_2	2.7\|1060526\|32\|NZ_CP053573\|CRISPRCasFinder	1060526-1060557	32	NZ_CP042247	Escherichia coli strain BCE049 plasmid pBCE049-1, complete sequence	11416-11447	7	0.781
NZ_CP053573_2	2.7\|1060526\|32\|NZ_CP053573\|CRISPRCasFinder	1060526-1060557	32	NC_012944	Escherichia coli Vir68 plasmid pVir68, complete sequence	2318-2349	7	0.781
NZ_CP053573_2	2.12\|1060805\|29\|NZ_CP053573\|CRISPRCasFinder	1060805-1060833	29	CP003953	Rhodococcus opacus PD630 plasmid 4, complete sequence	44777-44805	7	0.759
NZ_CP053573_1	1.1\|1032155\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1032155-1032186	32	LR134281	Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6	2458-2489	8	0.75
NZ_CP053573_1	1.4\|1032338\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1032338-1032369	32	NZ_LR214939	Mycoplasma salivarium strain NCTC10113 plasmid 2	36619-36650	8	0.75
NZ_CP053573_1	1.14\|1032948\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1032948-1032979	32	MN850579	Escherichia phage mogra, complete genome	19204-19235	8	0.75
NZ_CP053573_1	1.14\|1032948\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1032948-1032979	32	MK047718	Escherichia phage p000y, complete genome	106649-106680	8	0.75
NZ_CP053573_1	1.14\|1032948\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1032948-1032979	32	MK962754	Shigella phage JK36, complete genome	155618-155649	8	0.75
NZ_CP053573_1	1.14\|1032948\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1032948-1032979	32	KR422352	Escherichia phage APCEc01, complete genome	30446-30477	8	0.75
NZ_CP053573_1	1.14\|1032948\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1032948-1032979	32	MK327943	Escherichia phage vB_EcoM_G53, complete genome	154276-154307	8	0.75
NZ_CP053573_1	1.15\|1033009\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1033009-1033040	32	NZ_CP015007	Aminobacter aminovorans strain KCTC 2477 plasmid pAA02, complete sequence	19526-19557	8	0.75
NZ_CP053573_1	1.15\|1033009\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1033009-1033040	32	KC170278	Uncultured bacterium plasmid pMBUI4, complete sequence	26525-26556	8	0.75
NZ_CP053573_2	2.7\|1060526\|32\|NZ_CP053573\|CRISPRCasFinder	1060526-1060557	32	NZ_CP043415	Escherichia coli strain EC42405 plasmid pNTEC2-42405, complete sequence	22245-22276	8	0.75
NZ_CP053573_2	2.7\|1060526\|32\|NZ_CP053573\|CRISPRCasFinder	1060526-1060557	32	NZ_CP043415	Escherichia coli strain EC42405 plasmid pNTEC2-42405, complete sequence	24027-24058	8	0.75
NZ_CP053573_2	2.7\|1060526\|32\|NZ_CP053573\|CRISPRCasFinder	1060526-1060557	32	NZ_CP051656	Escherichia coli strain RM11911 plasmid pRM11911	105277-105308	8	0.75
NZ_CP053573_2	2.7\|1060526\|32\|NZ_CP053573\|CRISPRCasFinder	1060526-1060557	32	NZ_CP051656	Escherichia coli strain RM11911 plasmid pRM11911	105493-105524	8	0.75
NZ_CP053573_2	2.7\|1060526\|32\|NZ_CP053573\|CRISPRCasFinder	1060526-1060557	32	NZ_CP051656	Escherichia coli strain RM11911 plasmid pRM11911	106843-106874	8	0.75
NZ_CP053573_2	2.7\|1060526\|32\|NZ_CP053573\|CRISPRCasFinder	1060526-1060557	32	NZ_CP042247	Escherichia coli strain BCE049 plasmid pBCE049-1, complete sequence	11524-11555	8	0.75
NZ_CP053573_2	2.7\|1060526\|32\|NZ_CP053573\|CRISPRCasFinder	1060526-1060557	32	NZ_CP042247	Escherichia coli strain BCE049 plasmid pBCE049-1, complete sequence	13290-13321	8	0.75
NZ_CP053573_2	2.7\|1060526\|32\|NZ_CP053573\|CRISPRCasFinder	1060526-1060557	32	NC_012944	Escherichia coli Vir68 plasmid pVir68, complete sequence	1994-2025	8	0.75
NZ_CP053573_2	2.7\|1060526\|32\|NZ_CP053573\|CRISPRCasFinder	1060526-1060557	32	NC_012944	Escherichia coli Vir68 plasmid pVir68, complete sequence	2102-2133	8	0.75
NZ_CP053573_2	2.7\|1060526\|32\|NZ_CP053573\|CRISPRCasFinder	1060526-1060557	32	NC_012944	Escherichia coli Vir68 plasmid pVir68, complete sequence	2210-2241	8	0.75
NZ_CP053573_1	1.4\|1032338\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1032338-1032369	32	MN693211	Marine virus AFVG_25M75, complete genome	19967-19998	9	0.719
NZ_CP053573_1	1.4\|1032338\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1032338-1032369	32	MN693477	Marine virus AFVG_25M76, complete genome	11969-12000	9	0.719
NZ_CP053573_1	1.4\|1032338\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1032338-1032369	32	MN694133	Marine virus AFVG_250M544, complete genome	23053-23084	9	0.719
NZ_CP053573_1	1.4\|1032338\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1032338-1032369	32	MF360958	Salicola phage SCTP-2, complete genome	374040-374071	9	0.719
NZ_CP053573_1	1.5\|1032399\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1032399-1032430	32	NC_014305	Erwinia billingiae Eb661 plasmid pEB170, complete sequence	49327-49358	9	0.719
NZ_CP053573_1	1.14\|1032948\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1032948-1032979	32	MN693865	Marine virus AFVG_250M332, complete genome	12881-12912	9	0.719
NZ_CP053573_1	1.16\|1033070\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1033070-1033101	32	KU886225	Erwinia phage vB_EamM_Deimos-Minion, complete genome	70239-70270	9	0.719
NZ_CP053573_1	1.17\|1033131\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1033131-1033162	32	MN693452	Marine virus AFVG_25M444, complete genome	14431-14462	9	0.719
NZ_CP053573_1	1.17\|1033131\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1033131-1033162	32	MN693513	Marine virus AFVG_25M203, complete genome	29916-29947	9	0.719
NZ_CP053573_1	1.17\|1033131\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1033131-1033162	32	MN693605	Marine virus AFVG_25M414, complete genome	13821-13852	9	0.719
NZ_CP053573_1	1.17\|1033131\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1033131-1033162	32	MN693215	Marine virus AFVG_25M456, complete genome	13860-13891	9	0.719
NZ_CP053573_2	2.5\|1060415\|32\|NZ_CP053573\|CRISPRCasFinder	1060415-1060446	32	MN905160	Pseudomonas phage PE09, complete genome	26789-26820	9	0.719
NZ_CP053573_2	2.5\|1060415\|32\|NZ_CP053573\|CRISPRCasFinder	1060415-1060446	32	MH029516	Gokushovirinae environmental samples clone NHS-Seq188, complete sequence	3748-3779	9	0.719
NZ_CP053573_2	2.5\|1060415\|32\|NZ_CP053573\|CRISPRCasFinder	1060415-1060446	32	DQ054536	Lactococcus phage P008, complete genome	23058-23089	9	0.719
NZ_CP053573_2	2.5\|1060415\|32\|NZ_CP053573\|CRISPRCasFinder	1060415-1060446	32	NC_021852	Lactococcus phage P680, complete genome	24815-24846	9	0.719
NZ_CP053573_2	2.5\|1060415\|32\|NZ_CP053573\|CRISPRCasFinder	1060415-1060446	32	KC182542	Lactococcus phage 340, complete genome	25881-25912	9	0.719
NZ_CP053573_2	2.5\|1060415\|32\|NZ_CP053573\|CRISPRCasFinder	1060415-1060446	32	NC_049404	Lactococcus phage 56003, complete genome	24847-24878	9	0.719
NZ_CP053573_2	2.7\|1060526\|32\|NZ_CP053573\|CRISPRCasFinder	1060526-1060557	32	CP042595	Streptomyces albogriseolus strain LBX-2 plasmid pSALBX2, complete sequence	64507-64538	9	0.719
NZ_CP053573_1	1.3\|1032277\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1032277-1032308	32	MN693212	Marine virus AFVG_25M426, complete genome	23908-23939	10	0.688
NZ_CP053573_1	1.4\|1032338\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1032338-1032369	32	MN693429	Marine virus AFVG_25M409, complete genome	21510-21541	10	0.688
NZ_CP053573_1	1.4\|1032338\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1032338-1032369	32	MK774614	Aeromonas phage CF8, complete genome	18391-18422	10	0.688
NZ_CP053573_1	1.4\|1032338\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1032338-1032369	32	MN694484	Marine virus AFVG_250M1201, complete genome	41500-41531	10	0.688
NZ_CP053573_2	2.7\|1060526\|32\|NZ_CP053573\|CRISPRCasFinder	1060526-1060557	32	NZ_CP043415	Escherichia coli strain EC42405 plasmid pNTEC2-42405, complete sequence	23271-23302	10	0.688
NZ_CP053573_2	2.7\|1060526\|32\|NZ_CP053573\|CRISPRCasFinder	1060526-1060557	32	NZ_CP051656	Escherichia coli strain RM11911 plasmid pRM11911	105817-105848	10	0.688
NZ_CP053573_2	2.7\|1060526\|32\|NZ_CP053573\|CRISPRCasFinder	1060526-1060557	32	NZ_CP042247	Escherichia coli strain BCE049 plasmid pBCE049-1, complete sequence	12858-12889	10	0.688
NZ_CP053573_1	1.2\|1032216\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1032216-1032247	32	NZ_CP013524	Rhizobium phaseoli strain R744 plasmid pRphaR744b, complete sequence	79293-79324	11	0.656
NZ_CP053573_1	1.2\|1032216\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1032216-1032247	32	NZ_CP013553	Rhizobium phaseoli strain N931 plasmid pRphaN931a, complete sequence	89837-89868	11	0.656
NZ_CP053573_1	1.2\|1032216\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1032216-1032247	32	NZ_CP013586	Rhizobium phaseoli strain N161 plasmid pRphaN161a, complete sequence	95232-95263	11	0.656
NZ_CP053573_1	1.2\|1032216\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1032216-1032247	32	NZ_CP013559	Rhizobium phaseoli strain N841 plasmid pRphaN841b, complete sequence	89915-89946	11	0.656
NZ_CP053573_1	1.2\|1032216\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1032216-1032247	32	NZ_CP013528	Rhizobium phaseoli strain R723 plasmid pRphaR723a, complete sequence	106451-106482	11	0.656
NZ_CP053573_1	1.2\|1032216\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1032216-1032247	32	NZ_CP013538	Rhizobium phaseoli strain R630 plasmid pRphaR630a, complete sequence	98213-98244	11	0.656
NZ_CP053573_1	1.2\|1032216\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1032216-1032247	32	NZ_CP013564	Rhizobium phaseoli strain N831 plasmid pRphaN831a, complete sequence	89837-89868	11	0.656
NZ_CP053573_1	1.2\|1032216\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1032216-1032247	32	NZ_CP013581	Rhizobium phaseoli strain N261 plasmid pRphaN261a, complete sequence	106451-106482	11	0.656
NZ_CP053573_1	1.3\|1032277\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1032277-1032308	32	NC_014718	Paraburkholderia rhizoxinica HKI 454 plasmid pBRH01, complete sequence	125531-125562	11	0.656
NZ_CP053573_1	1.3\|1032277\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1032277-1032308	32	NC_014723	Paraburkholderia rhizoxinica HKI 454 plasmid pBRH02, complete sequence	159340-159371	11	0.656
NZ_CP053573_1	1.4\|1032338\|32\|NZ_CP053573\|PILER-CR,CRISPRCasFinder,CRT	1032338-1032369	32	AP014437	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C27-MedDCM-OCT-S26-C121, * SEQUENCING IN PROGRESS *, 5 ordered pieces	2877-2908	11	0.656

1. spacer 1.18|1033192|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to MN855773 (Siphoviridae sp. isolate 219, complete genome) position: , mismatch: 1, identity: 0.969

gcttcacccagtgccacttcttcgcaggaatc	CRISPR spacer
gcttcacccagtgccacttcttcgccggaatc	Protospacer
************************* ******

2. spacer 1.18|1033192|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to MT330372 (Cronobacter phage JC01, complete genome) position: , mismatch: 1, identity: 0.969

gcttcacccagtgccacttcttcgcaggaatc	CRISPR spacer
gcttcacccagtgccacttcttcgcaggcatc	Protospacer
**************************** ***

3. spacer 1.18|1033192|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to MN693322 (Marine virus AFVG_25M496, complete genome) position: , mismatch: 3, identity: 0.906

gcttcacccagtgccacttcttcgcaggaatc	CRISPR spacer
aattcaaccagtgccacttcttcgcaggaatc	Protospacer
. **** *************************

4. spacer 1.18|1033192|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to AP013452 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G17, isolate: uvMED-CGR-C66A-MedDCM-OCT-S44-C68) position: , mismatch: 3, identity: 0.906

gcttcacccagtgccacttcttcgcaggaatc	CRISPR spacer
ggttcaaacagtgccacttcttcgcaggaatc	Protospacer
* ****  ************************

5. spacer 1.18|1033192|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to AP013449 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G17, isolate: uvMED-CGR-C66A-MedDCM-OCT-S35-C82) position: , mismatch: 3, identity: 0.906

gcttcacccagtgccacttcttcgcaggaatc	CRISPR spacer
gatttaaccagtgccacttcttcgcaggaatc	Protospacer
* **.* *************************

6. spacer 1.18|1033192|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to MT448615 (Vibrio phage Marilyn, complete genome) position: , mismatch: 4, identity: 0.875

gcttcacccagtgccacttcttcgcaggaatc	CRISPR spacer
aattcacccaatgccacttcttcgcaggtatc	Protospacer
. ********.***************** ***

7. spacer 1.18|1033192|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to AP013448 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G17, isolate: uvMED-CGR-C66A-MedDCM-OCT-S29-C69) position: , mismatch: 4, identity: 0.875

gcttcacccagtgccacttcttcgcaggaatc	CRISPR spacer
gatttaaccagtgccacttcttcgcaggaatt	Protospacer
* **.* ************************.

8. spacer 1.18|1033192|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to AP013447 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G17, isolate: uvMED-CGR-C66A-MedDCM-OCT-S28-C59) position: , mismatch: 4, identity: 0.875

gcttcacccagtgccacttcttcgcaggaatc	CRISPR spacer
gatttaaccagtgccacttcttcgcaggaatt	Protospacer
* **.* ************************.

9. spacer 1.18|1033192|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to AP013446 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G17, isolate: uvMED-CGR-C66A-MedDCM-OCT-S24-C64) position: , mismatch: 4, identity: 0.875

gcttcacccagtgccacttcttcgcaggaatc	CRISPR spacer
gatttaaccagtgccacttcttcgcaggaatt	Protospacer
* **.* ************************.

10. spacer 1.18|1033192|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to AP013450 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G17, isolate: uvMED-CGR-C66A-MedDCM-OCT-S36-C74) position: , mismatch: 4, identity: 0.875

gcttcacccagtgccacttcttcgcaggaatc	CRISPR spacer
gatttaaccagtgccacttcttcgcaggaatt	Protospacer
* **.* ************************.

11. spacer 1.18|1033192|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to JF412295 (EBPR podovirus 2, partial sequence) position: , mismatch: 4, identity: 0.875

gcttcacccagtgccacttcttcgcaggaatc	CRISPR spacer
gatacacccagtgccacttcttcgccgggatc	Protospacer
* * ********************* **.***

12. spacer 1.18|1033192|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to LC553736 (Salmonella phage SAP012 DNA, complete sequence) position: , mismatch: 4, identity: 0.875

gcttcacccagtgccacttcttcgcaggaatc	CRISPR spacer
gttacacgcagtgccacttcttcgcaggactc	Protospacer
*.* *** ********************* **

13. spacer 1.18|1033192|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to NC_023555 (Edwardsiella phage eiAU-183, complete genome) position: , mismatch: 5, identity: 0.844

gcttcacccagtgccacttcttcgcaggaatc	CRISPR spacer
aatttacccagtgccacttcttcgccggaatt	Protospacer
. **.******************** *****.

14. spacer 1.18|1033192|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to MF476925 (Klebsiella phage YMC16/01/N133_KPN_BP, complete genome) position: , mismatch: 5, identity: 0.844

gcttcacccagtgccacttcttcgcaggaatc	CRISPR spacer
aatttacccagtgccacttcttcgctggaatt	Protospacer
. **.******************** *****.

15. spacer 1.18|1033192|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to NC_042029 (Edwardsiella phage eiAU, complete genome) position: , mismatch: 5, identity: 0.844

gcttcacccagtgccacttcttcgcaggaatc	CRISPR spacer
aatttacccagtgccacttcttcgccggaatt	Protospacer
. **.******************** *****.

16. spacer 1.18|1033192|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to NC_048198 (Erwinia phage vB_EhrS_59, complete genome) position: , mismatch: 5, identity: 0.844

gcttcacccagtgccacttcttcgcaggaatc	CRISPR spacer
gatttacccagtgccacttcttcgccggagtt	Protospacer
* **.******************** ***.*.

17. spacer 2.10|1060694|29|NZ_CP053573|CRISPRCasFinder matches to NZ_CP030830 (Neorhizobium sp. NCHU2750 plasmid pNCHU2750c, complete sequence) position: , mismatch: 5, identity: 0.828

cctattgtagacattctgactgccaccgc-	CRISPR spacer
actatcgtagacattctgactgac-ctgcg	Protospacer
 ****.**************** * *.**

18. spacer 2.12|1060805|29|NZ_CP053573|CRISPRCasFinder matches to NZ_CP020898 (Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRetBra5b, complete sequence) position: , mismatch: 5, identity: 0.828

acctaagatgtactggtcgccaccgttgt	CRISPR spacer
gccacagatgtacaggtcgccaccgttga	Protospacer
.**  ******** **************

19. spacer 2.12|1060805|29|NZ_CP053573|CRISPRCasFinder matches to NZ_CP021027 (Rhizobium sp. TAL182 plasmid pRetTAL182c, complete sequence) position: , mismatch: 5, identity: 0.828

acctaagatgtactggtcgccaccgttgt	CRISPR spacer
gccacagatgtacaggtcgccaccgttga	Protospacer
.**  ******** **************

20. spacer 2.12|1060805|29|NZ_CP053573|CRISPRCasFinder matches to NZ_CP013633 (Rhizobium sp. N324 plasmid pRspN324c, complete sequence) position: , mismatch: 5, identity: 0.828

acctaagatgtactggtcgccaccgttgt	CRISPR spacer
gccacagatgtacaggtcgccaccgttga	Protospacer
.**  ******** **************

21. spacer 2.12|1060805|29|NZ_CP053573|CRISPRCasFinder matches to NZ_CP013555 (Rhizobium phaseoli strain N931 plasmid pRphaN931c, complete sequence) position: , mismatch: 5, identity: 0.828

acctaagatgtactggtcgccaccgttgt	CRISPR spacer
gccacagatgtacaggtcgccaccgttga	Protospacer
.**  ******** **************

22. spacer 2.12|1060805|29|NZ_CP053573|CRISPRCasFinder matches to NZ_CP020950 (Rhizobium sp. CIAT894 plasmid pRheCIAT894c, complete sequence) position: , mismatch: 5, identity: 0.828

acctaagatgtactggtcgccaccgttgt	CRISPR spacer
gccacagatgtacaggtcgccaccgttga	Protospacer
.**  ******** **************

23. spacer 2.12|1060805|29|NZ_CP053573|CRISPRCasFinder matches to NZ_CP013587 (Rhizobium phaseoli strain N161 plasmid pRphaN161b, complete sequence) position: , mismatch: 5, identity: 0.828

acctaagatgtactggtcgccaccgttgt	CRISPR spacer
gccacagatgtacaggtcgccaccgttga	Protospacer
.**  ******** **************

24. spacer 2.12|1060805|29|NZ_CP053573|CRISPRCasFinder matches to NZ_CP013598 (Rhizobium sp. N741 plasmid pRspN741c, complete sequence) position: , mismatch: 5, identity: 0.828

acctaagatgtactggtcgccaccgttgt	CRISPR spacer
gccacagatgtacaggtcgccaccgttga	Protospacer
.**  ******** **************

25. spacer 2.12|1060805|29|NZ_CP053573|CRISPRCasFinder matches to NZ_CP013561 (Rhizobium phaseoli strain N841 plasmid pRphaN841d, complete sequence) position: , mismatch: 5, identity: 0.828

acctaagatgtactggtcgccaccgttgt	CRISPR spacer
gccacagatgtacaggtcgccaccgttga	Protospacer
.**  ******** **************

26. spacer 2.12|1060805|29|NZ_CP053573|CRISPRCasFinder matches to NZ_CP013578 (Rhizobium phaseoli strain N671 plasmid pRphaN671d, complete sequence) position: , mismatch: 5, identity: 0.828

acctaagatgtactggtcgccaccgttgt	CRISPR spacer
gccacagatgtacaggtcgccaccgttga	Protospacer
.**  ******** **************

27. spacer 2.12|1060805|29|NZ_CP053573|CRISPRCasFinder matches to NZ_CP013550 (Rhizobium phaseoli strain R611 plasmid pRetR611c, complete sequence) position: , mismatch: 5, identity: 0.828

acctaagatgtactggtcgccaccgttgt	CRISPR spacer
gccacagatgtacaggtcgccaccgttga	Protospacer
.**  ******** **************

28. spacer 2.12|1060805|29|NZ_CP053573|CRISPRCasFinder matches to NZ_CP013530 (Rhizobium phaseoli strain R723 plasmid pRphaR723c, complete sequence) position: , mismatch: 5, identity: 0.828

acctaagatgtactggtcgccaccgttgt	CRISPR spacer
gccacagatgtacaggtcgccaccgttga	Protospacer
.**  ******** **************

29. spacer 2.12|1060805|29|NZ_CP053573|CRISPRCasFinder matches to NZ_CP013535 (Rhizobium phaseoli strain R650 plasmid pRphaR650c, complete sequence) position: , mismatch: 5, identity: 0.828

acctaagatgtactggtcgccaccgttgt	CRISPR spacer
gccacagatgtacaggtcgccaccgttga	Protospacer
.**  ******** **************

30. spacer 2.12|1060805|29|NZ_CP053573|CRISPRCasFinder matches to NZ_CP013540 (Rhizobium phaseoli strain R630 plasmid pRphaR630c, complete sequence) position: , mismatch: 5, identity: 0.828

acctaagatgtactggtcgccaccgttgt	CRISPR spacer
gccacagatgtacaggtcgccaccgttga	Protospacer
.**  ******** **************

31. spacer 2.12|1060805|29|NZ_CP053573|CRISPRCasFinder matches to NZ_CP013544 (Rhizobium phaseoli strain R620 plasmid pRphaR620b, complete sequence) position: , mismatch: 5, identity: 0.828

acctaagatgtactggtcgccaccgttgt	CRISPR spacer
gccacagatgtacaggtcgccaccgttga	Protospacer
.**  ******** **************

32. spacer 2.12|1060805|29|NZ_CP053573|CRISPRCasFinder matches to NZ_CP013566 (Rhizobium phaseoli strain N831 plasmid pRphaN831c, complete sequence) position: , mismatch: 5, identity: 0.828

acctaagatgtactggtcgccaccgttgt	CRISPR spacer
gccacagatgtacaggtcgccaccgttga	Protospacer
.**  ******** **************

33. spacer 2.12|1060805|29|NZ_CP053573|CRISPRCasFinder matches to NZ_CP013502 (Rhizobium esperanzae strain N561 plasmid pRspN561b, complete sequence) position: , mismatch: 5, identity: 0.828

acctaagatgtactggtcgccaccgttgt	CRISPR spacer
gccacagatgtacaggtcgccaccgttga	Protospacer
.**  ******** **************

34. spacer 2.12|1060805|29|NZ_CP053573|CRISPRCasFinder matches to NZ_CP013583 (Rhizobium phaseoli strain N261 plasmid pRphaN261c, complete sequence) position: , mismatch: 5, identity: 0.828

acctaagatgtactggtcgccaccgttgt	CRISPR spacer
gccacagatgtacaggtcgccaccgttga	Protospacer
.**  ******** **************

35. spacer 2.12|1060805|29|NZ_CP053573|CRISPRCasFinder matches to NZ_CP013508 (Rhizobium sp. N1341 plasmid pRspN1341c, complete sequence) position: , mismatch: 5, identity: 0.828

acctaagatgtactggtcgccaccgttgt	CRISPR spacer
gccacagatgtacaggtcgccaccgttga	Protospacer
.**  ******** **************

36. spacer 2.12|1060805|29|NZ_CP053573|CRISPRCasFinder matches to NZ_CP013519 (Rhizobium sp. N113 plasmid pRspN113b, complete sequence) position: , mismatch: 5, identity: 0.828

acctaagatgtactggtcgccaccgttgt	CRISPR spacer
gccacagatgtacaggtcgccaccgttga	Protospacer
.**  ******** **************

37. spacer 2.12|1060805|29|NZ_CP053573|CRISPRCasFinder matches to NZ_CP013572 (Rhizobium phaseoli strain N771 plasmid pRphaN671d, complete sequence) position: , mismatch: 5, identity: 0.828

acctaagatgtactggtcgccaccgttgt	CRISPR spacer
gccacagatgtacaggtcgccaccgttga	Protospacer
.**  ******** **************

38. spacer 2.12|1060805|29|NZ_CP053573|CRISPRCasFinder matches to NZ_CP021125 (Rhizobium sp. Kim5 plasmid pRetKim5a, complete sequence) position: , mismatch: 5, identity: 0.828

acctaagatgtactggtcgccaccgttgt	CRISPR spacer
gccacagatgtacaggtcgccaccgttga	Protospacer
.**  ******** **************

39. spacer 2.12|1060805|29|NZ_CP053573|CRISPRCasFinder matches to NZ_CP013492 (Rhizobium sp. N6212 plasmid pRspN6212b, complete sequence) position: , mismatch: 5, identity: 0.828

acctaagatgtactggtcgccaccgttgt	CRISPR spacer
gccacagatgtacaggtcgccaccgttga	Protospacer
.**  ******** **************

40. spacer 2.12|1060805|29|NZ_CP053573|CRISPRCasFinder matches to NZ_CP013514 (Rhizobium sp. N1314 plasmid pRspN1314c, complete sequence) position: , mismatch: 5, identity: 0.828

acctaagatgtactggtcgccaccgttgt	CRISPR spacer
gccacagatgtacaggtcgccaccgttga	Protospacer
.**  ******** **************

41. spacer 2.12|1060805|29|NZ_CP053573|CRISPRCasFinder matches to NZ_CP013497 (Rhizobium sp. N621 plasmid pRspN621b, complete sequence) position: , mismatch: 5, identity: 0.828

acctaagatgtactggtcgccaccgttgt	CRISPR spacer
gccacagatgtacaggtcgccaccgttga	Protospacer
.**  ******** **************

42. spacer 2.12|1060805|29|NZ_CP053573|CRISPRCasFinder matches to NZ_CP013592 (Rhizobium sp. N871 plasmid pRspN871b, complete sequence) position: , mismatch: 5, identity: 0.828

acctaagatgtactggtcgccaccgttgt	CRISPR spacer
gccacagatgtacaggtcgccaccgttga	Protospacer
.**  ******** **************

43. spacer 2.12|1060805|29|NZ_CP053573|CRISPRCasFinder matches to CP007643 (Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803b, complete sequence) position: , mismatch: 5, identity: 0.828

acctaagatgtactggtcgccaccgttgt	CRISPR spacer
gccacagatgtacaggtcgccaccgttga	Protospacer
.**  ******** **************

44. spacer 2.12|1060805|29|NZ_CP053573|CRISPRCasFinder matches to NC_010996 (Rhizobium etli CIAT 652 plasmid pB, complete sequence) position: , mismatch: 5, identity: 0.828

acctaagatgtactggtcgccaccgttgt	CRISPR spacer
gccacagatgtacaggtcgccaccgttga	Protospacer
.**  ******** **************

45. spacer 2.12|1060805|29|NZ_CP053573|CRISPRCasFinder matches to NZ_CP013604 (Rhizobium sp. N731 plasmid pRspN731c, complete sequence) position: , mismatch: 5, identity: 0.828

acctaagatgtactggtcgccaccgttgt	CRISPR spacer
gccacagatgtacaggtcgccaccgttga	Protospacer
.**  ******** **************

46. spacer 2.12|1060805|29|NZ_CP053573|CRISPRCasFinder matches to NZ_CP017243 (Rhizobium etli 8C-3 plasmid pRsp8C3b, complete sequence) position: , mismatch: 5, identity: 0.828

acctaagatgtactggtcgccaccgttgt	CRISPR spacer
gccacagatgtacaggtcgccaccgttga	Protospacer
.**  ******** **************

47. spacer 2.12|1060805|29|NZ_CP053573|CRISPRCasFinder matches to NZ_CP034999 (Rhizobium acidisoli strain FH23 plasmid pRapFH23a, complete sequence) position: , mismatch: 5, identity: 0.828

acctaagatgtactggtcgccaccgttgt	CRISPR spacer
gccacagatgtacaggtcgccaccgttga	Protospacer
.**  ******** **************

48. spacer 1.4|1032338|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF078635 (Acinetobacter pittii strain HGSA535 plasmid pLS535, complete sequence) position: , mismatch: 6, identity: 0.812

-ccggaacatcatcactatcatcattaaaaaac	CRISPR spacer
aacccaaca-catcactattttcattaaaaaac	Protospacer
  *  **** *********. ************

49. spacer 1.4|1032338|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046298 (Acinetobacter lwoffii strain FDAARGOS_552 plasmid unnamed3, complete sequence) position: , mismatch: 6, identity: 0.812

-ccggaacatcatcactatcatcattaaaaaac	CRISPR spacer
aacccaaca-catcactattttcattaaaaaac	Protospacer
  *  **** *********. ************

50. spacer 1.4|1032338|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031999 (Acinetobacter haemolyticus strain INNSZ174 plasmid pAhaemINNSZ174c, complete sequence) position: , mismatch: 6, identity: 0.812

-ccggaacatcatcactatcatcattaaaaaac	CRISPR spacer
aacccaaca-catcactattttcattaaaaaac	Protospacer
  *  **** *********. ************

51. spacer 1.15|1033009|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013419 (Burkholderia sp. MSMB0266 plasmid pMSMB0266, complete sequence) position: , mismatch: 6, identity: 0.812

aacgcgacggccatttattcgcggaaatggag-	CRISPR spacer
tacgcgacggccattttttggcgg-aatgatgt	Protospacer
 *************** ** **** ****. *

52. spacer 1.18|1033192|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to MN694239 (Marine virus AFVG_250M451, complete genome) position: , mismatch: 6, identity: 0.812

gcttcacccagtgccacttcttcgcaggaatc	CRISPR spacer
gatatacgcagtgccacttcttcgcagggatt	Protospacer
* * .** ********************.**.

53. spacer 2.12|1060805|29|NZ_CP053573|CRISPRCasFinder matches to MT536174 (Stenotrophomonas phage vB_SmaS-AXL_3, complete genome) position: , mismatch: 6, identity: 0.793

acctaagatgtactggtcgccaccgttgt	CRISPR spacer
ggcgaagatgtactggtcgccggcgttga	Protospacer
. * *****************. *****

54. spacer 1.3|1032277|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to MK629528 (Escherichia phage Lidtsur, complete genome) position: , mismatch: 7, identity: 0.781

----caaatattagatgcaacaggcgaacatattat	CRISPR spacer
accgcaga----agatgcaacagacgaacagattat	Protospacer
    **.*    ***********.****** *****

55. spacer 1.4|1032338|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to MK416009 (Klebsiella phage ST11-OXA245phi3.1, complete genome) position: , mismatch: 7, identity: 0.781

ccggaacatcatcactatcatcattaaaaaac	CRISPR spacer
ccggaacagcatcaccatcatcattccgataa	Protospacer
******** ******.*********  .* *

56. spacer 1.4|1032338|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to MK422449 (Klebsiella phage ST512-KPC3phi13.2, complete genome) position: , mismatch: 7, identity: 0.781

ccggaacatcatcactatcatcattaaaaaac	CRISPR spacer
ccggaacagcatcaccatcatcattccgataa	Protospacer
******** ******.*********  .* *

57. spacer 1.4|1032338|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to MK416020 (Klebsiella phage ST11-VIM1phi8.4, complete genome) position: , mismatch: 7, identity: 0.781

ccggaacatcatcactatcatcattaaaaaac	CRISPR spacer
ccggaacagcatcaccatcatcattccgataa	Protospacer
******** ******.*********  .* *

58. spacer 1.4|1032338|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to MK433580 (Klebsiella phage ST11-OXA48phi15.3, complete genome) position: , mismatch: 7, identity: 0.781

ccggaacatcatcactatcatcattaaaaaac	CRISPR spacer
ccggaacagcatcaccatcatcattccgataa	Protospacer
******** ******.*********  .* *

59. spacer 1.4|1032338|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to MK422454 (Klebsiella phage ST340-VIM1phi10.2, complete genome) position: , mismatch: 7, identity: 0.781

ccggaacatcatcactatcatcattaaaaaac	CRISPR spacer
ccggaacagcatcaccatcatcattccgataa	Protospacer
******** ******.*********  .* *

60. spacer 1.4|1032338|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to MK433582 (Klebsiella phage ST258-KPC3phi16.2, complete genome) position: , mismatch: 7, identity: 0.781

ccggaacatcatcactatcatcattaaaaaac	CRISPR spacer
ccggaacagcatcaccatcatcattccgataa	Protospacer
******** ******.*********  .* *

61. spacer 1.7|1032521|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049751 (Rhodococcus fascians A21d2 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

ccgactaacccacgtcgcgatctcgtaaaagc	CRISPR spacer
cctgcacacccacgtcgcgatctcgaacaagg	Protospacer
** .*  ****************** * ***

62. spacer 1.7|1032521|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045327 (Mycobacterium sp. THAF192 plasmid pTHAF192_b, complete sequence) position: , mismatch: 7, identity: 0.781

ccgactaacccacgtcgcgatctcgtaaaagc	CRISPR spacer
cctgcacacccacgtcgcgatctcgaacaagg	Protospacer
** .*  ****************** * ***

63. spacer 1.8|1032582|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013110 (Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence) position: , mismatch: 7, identity: 0.781

tcaccgtgggtgaatgttccggcgaagtgcag-	CRISPR spacer
acaccgagggtgaatattccggcgccg-gcgga	Protospacer
 ***** ********.********  * **.*

64. spacer 1.8|1032582|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013054 (Sinorhizobium americanum CCGM7 plasmid C, complete sequence) position: , mismatch: 7, identity: 0.781

tcaccgtgggtgaatgttccggcgaagtgcag-	CRISPR spacer
acaccgagggtgaatattccggcgcgg-gcggc	Protospacer
 ***** ********.******** .* **.*

65. spacer 1.18|1033192|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to KT997870 (Uncultured Mediterranean phage uvDeep-CGR2-AD3-C191, complete genome) position: , mismatch: 7, identity: 0.781

gcttcacccagtgccacttcttcgcaggaatc	CRISPR spacer
ggtttgagcagtgccatttcttcgccggaatc	Protospacer
* **..  ********.******** ******

66. spacer 2.3|1060307|29|NZ_CP053573|CRISPRCasFinder matches to NZ_CP030772 (Streptomyces sp. YIM 121038 plasmid pSSP121038, complete sequence) position: , mismatch: 7, identity: 0.759

cctattgctgacgtcctgccagccaccgt	CRISPR spacer
accggtgcggacgtcctgccggccaccgc	Protospacer
 *.. *** ***********.*******.

67. spacer 2.3|1060307|29|NZ_CP053573|CRISPRCasFinder matches to NZ_CP030772 (Streptomyces sp. YIM 121038 plasmid pSSP121038, complete sequence) position: , mismatch: 7, identity: 0.759

cctattgctgacgtcctgccagccaccgt	CRISPR spacer
accggtgcggacgtcctgccggccaccgc	Protospacer
 *.. *** ***********.*******.

68. spacer 2.3|1060307|29|NZ_CP053573|CRISPRCasFinder matches to NZ_CP030772 (Streptomyces sp. YIM 121038 plasmid pSSP121038, complete sequence) position: , mismatch: 7, identity: 0.759

cctattgctgacgtcctgccagccaccgt	CRISPR spacer
accggtgcggacgtcctgccggccaccgc	Protospacer
 *.. *** ***********.*******.

69. spacer 2.3|1060307|29|NZ_CP053573|CRISPRCasFinder matches to NZ_CP040096 (Pantoea sp. SO10 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.759

cctattgctgacgtcctgccagccaccgt	CRISPR spacer
gtttatgctgacgtcattccagccaccgc	Protospacer
 .*  ********** * **********.

70. spacer 2.4|1060361|29|NZ_CP053573|CRISPRCasFinder matches to NC_028655 (Yersinia phage vB_YenP_AP10, complete genome) position: , mismatch: 7, identity: 0.759

gtcatgggagacccattggaaacctctgt	CRISPR spacer
acaacgggagacccattggcaacctcttc	Protospacer
.. *.************** ******* .

71. spacer 2.7|1060526|32|NZ_CP053573|CRISPRCasFinder matches to NC_012855 (Ralstonia pickettii 12D plasmid pRp12D01, complete sequence) position: , mismatch: 7, identity: 0.781

accgctggagactcgctgctcgccatctgtgt	CRISPR spacer
accgccggagactcgctgctcgacaatggggc	Protospacer
*****.**************** ** . * *.

72. spacer 2.7|1060526|32|NZ_CP053573|CRISPRCasFinder matches to NZ_CP043415 (Escherichia coli strain EC42405 plasmid pNTEC2-42405, complete sequence) position: , mismatch: 7, identity: 0.781

accgctggagactcgctgctcgccatctgtgt	CRISPR spacer
accgctggagactagctgctccccgccactga	Protospacer
************* ******* **..*  **

73. spacer 2.7|1060526|32|NZ_CP053573|CRISPRCasFinder matches to NZ_CP051656 (Escherichia coli strain RM11911 plasmid pRM11911) position: , mismatch: 7, identity: 0.781

accgctggagactcgctgctcgccatctgtgt	CRISPR spacer
accgctggagactagctgctccccgccactga	Protospacer
************* ******* **..*  **

74. spacer 2.7|1060526|32|NZ_CP053573|CRISPRCasFinder matches to NZ_CP042247 (Escherichia coli strain BCE049 plasmid pBCE049-1, complete sequence) position: , mismatch: 7, identity: 0.781

accgctggagactcgctgctcgccatctgtgt	CRISPR spacer
accgctggagactagctgctccccgccactga	Protospacer
************* ******* **..*  **

75. spacer 2.7|1060526|32|NZ_CP053573|CRISPRCasFinder matches to NC_012944 (Escherichia coli Vir68 plasmid pVir68, complete sequence) position: , mismatch: 7, identity: 0.781

accgctggagactcgctgctcgccatctgtgt	CRISPR spacer
accgctggagactagctgctccccgccactga	Protospacer
************* ******* **..*  **

76. spacer 2.12|1060805|29|NZ_CP053573|CRISPRCasFinder matches to CP003953 (Rhodococcus opacus PD630 plasmid 4, complete sequence) position: , mismatch: 7, identity: 0.759

acctaagatgtactggtcgccaccgttgt	CRISPR spacer
ggcgaagatgtactgttcgccaccgccga	Protospacer
. * *********** *********..*

77. spacer 1.1|1032155|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to LR134281 (Klebsiella aerogenes strain NCTC9793 genome assembly, plasmid: 6) position: , mismatch: 8, identity: 0.75

catagaaaacccgagtacgccgatcacctggg	CRISPR spacer
actggaaaacccggctacgccgatcacgagtg	Protospacer
  *.*********. ************  * *

78. spacer 1.4|1032338|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR214939 (Mycoplasma salivarium strain NCTC10113 plasmid 2) position: , mismatch: 8, identity: 0.75

ccggaacatcatcactatcatcattaaaaaac	CRISPR spacer
cagtttcatcattactatcatcatttaaagat	Protospacer
* *   ******.************ ***.*.

79. spacer 1.14|1032948|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to MN850579 (Escherichia phage mogra, complete genome) position: , mismatch: 8, identity: 0.75

gaaccagtgatgggggcgcaggttgatggact	CRISPR spacer
taaactttgatgggggcgcaggtgaatggaag	Protospacer
 ** *  **************** .*****

80. spacer 1.14|1032948|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to MK047718 (Escherichia phage p000y, complete genome) position: , mismatch: 8, identity: 0.75

gaaccagtgatgggggcgcaggttgatggact	CRISPR spacer
taaactttgatgggggcgcaggtgaatggaag	Protospacer
 ** *  **************** .*****

81. spacer 1.14|1032948|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to MK962754 (Shigella phage JK36, complete genome) position: , mismatch: 8, identity: 0.75

gaaccagtgatgggggcgcaggttgatggact	CRISPR spacer
taaactttgatgggggcgcaggtgaatggaag	Protospacer
 ** *  **************** .*****

82. spacer 1.14|1032948|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to KR422352 (Escherichia phage APCEc01, complete genome) position: , mismatch: 8, identity: 0.75

gaaccagtgatgggggcgcaggttgatggact	CRISPR spacer
taaactttgatgggggcgcaggtgaatggaag	Protospacer
 ** *  **************** .*****

83. spacer 1.14|1032948|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to MK327943 (Escherichia phage vB_EcoM_G53, complete genome) position: , mismatch: 8, identity: 0.75

gaaccagtgatgggggcgcaggttgatggact	CRISPR spacer
taaactttgatgggggcgcaggtgaatggaag	Protospacer
 ** *  **************** .*****

84. spacer 1.15|1033009|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015007 (Aminobacter aminovorans strain KCTC 2477 plasmid pAA02, complete sequence) position: , mismatch: 8, identity: 0.75

aacgcgacggccatttattcgcggaaatggag	CRISPR spacer
ttccaggcggccatgtattcgcggaagtggat	Protospacer
  *  *.******* ***********.****

85. spacer 1.15|1033009|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to KC170278 (Uncultured bacterium plasmid pMBUI4, complete sequence) position: , mismatch: 8, identity: 0.75

aacgcgacggccatttattcgcggaaatggag	CRISPR spacer
aacgtgacggccatttatgcgcgcattggtgg	Protospacer
****.************* **** *   * .*

86. spacer 2.7|1060526|32|NZ_CP053573|CRISPRCasFinder matches to NZ_CP043415 (Escherichia coli strain EC42405 plasmid pNTEC2-42405, complete sequence) position: , mismatch: 8, identity: 0.75

accgctggagactcgctgctcgccatctgtgt	CRISPR spacer
accgctggaaactcgctgctctcctccgctaa	Protospacer
*********.*********** ** .*  *.

87. spacer 2.7|1060526|32|NZ_CP053573|CRISPRCasFinder matches to NZ_CP043415 (Escherichia coli strain EC42405 plasmid pNTEC2-42405, complete sequence) position: , mismatch: 8, identity: 0.75

accgctggagactcgctgctcgccatctgtgt	CRISPR spacer
accactggagactcgctgctccccgttattaa	Protospacer
***.***************** **.*.  *.

88. spacer 2.7|1060526|32|NZ_CP053573|CRISPRCasFinder matches to NZ_CP051656 (Escherichia coli strain RM11911 plasmid pRM11911) position: , mismatch: 8, identity: 0.75

accgctggagactcgctgctcgccatctgtgt	CRISPR spacer
accactggagactcgctgctccccgttattaa	Protospacer
***.***************** **.*.  *.

89. spacer 2.7|1060526|32|NZ_CP053573|CRISPRCasFinder matches to NZ_CP051656 (Escherichia coli strain RM11911 plasmid pRM11911) position: , mismatch: 8, identity: 0.75

accgctggagactcgctgctcgccatctgtgt	CRISPR spacer
accactggagactcgctgctccccgttattaa	Protospacer
***.***************** **.*.  *.

90. spacer 2.7|1060526|32|NZ_CP053573|CRISPRCasFinder matches to NZ_CP051656 (Escherichia coli strain RM11911 plasmid pRM11911) position: , mismatch: 8, identity: 0.75

accgctggagactcgctgctcgccatctgtgt	CRISPR spacer
accgctggaaactcgctgctctcctccgctaa	Protospacer
*********.*********** ** .*  *.

91. spacer 2.7|1060526|32|NZ_CP053573|CRISPRCasFinder matches to NZ_CP042247 (Escherichia coli strain BCE049 plasmid pBCE049-1, complete sequence) position: , mismatch: 8, identity: 0.75

accgctggagactcgctgctcgccatctgtgt	CRISPR spacer
accgctggaaactcgctgctctcctccgctaa	Protospacer
*********.*********** ** .*  *.

92. spacer 2.7|1060526|32|NZ_CP053573|CRISPRCasFinder matches to NZ_CP042247 (Escherichia coli strain BCE049 plasmid pBCE049-1, complete sequence) position: , mismatch: 8, identity: 0.75

accgctggagactcgctgctcgccatctgtgt	CRISPR spacer
accactggagactcgctgctccccgttattaa	Protospacer
***.***************** **.*.  *.

93. spacer 2.7|1060526|32|NZ_CP053573|CRISPRCasFinder matches to NC_012944 (Escherichia coli Vir68 plasmid pVir68, complete sequence) position: , mismatch: 8, identity: 0.75

accgctggagactcgctgctcgccatctgtgt	CRISPR spacer
accgctggaaactcgctgctctcctccgctaa	Protospacer
*********.*********** ** .*  *.

94. spacer 2.7|1060526|32|NZ_CP053573|CRISPRCasFinder matches to NC_012944 (Escherichia coli Vir68 plasmid pVir68, complete sequence) position: , mismatch: 8, identity: 0.75

accgctggagactcgctgctcgccatctgtgt	CRISPR spacer
accgctggaaactcgctgctctcctccgctaa	Protospacer
*********.*********** ** .*  *.

95. spacer 2.7|1060526|32|NZ_CP053573|CRISPRCasFinder matches to NC_012944 (Escherichia coli Vir68 plasmid pVir68, complete sequence) position: , mismatch: 8, identity: 0.75

accgctggagactcgctgctcgccatctgtgt	CRISPR spacer
accgctggaaactcgctgctcacctccgctaa	Protospacer
*********.***********.** .*  *.

96. spacer 1.4|1032338|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to MN693211 (Marine virus AFVG_25M75, complete genome) position: , mismatch: 9, identity: 0.719

ccggaacatcatcactatcatcattaaaaaac	CRISPR spacer
agtctacatcatcaccatcatcattaaataca	Protospacer
     **********.************ *

97. spacer 1.4|1032338|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to MN693477 (Marine virus AFVG_25M76, complete genome) position: , mismatch: 9, identity: 0.719

ccggaacatcatcactatcatcattaaaaaac	CRISPR spacer
agtctacatcatcaccatcatcattaaataca	Protospacer
     **********.************ *

98. spacer 1.4|1032338|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to MN694133 (Marine virus AFVG_250M544, complete genome) position: , mismatch: 9, identity: 0.719

ccggaacatcatcactatcatcattaaaaaac	CRISPR spacer
aatcaacatcagcactatcttcattaaatact	Protospacer
    ******* ******* ******** * .

99. spacer 1.4|1032338|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to MF360958 (Salicola phage SCTP-2, complete genome) position: , mismatch: 9, identity: 0.719

ccggaacatcatcactatcatcattaaaaaac	CRISPR spacer
ctaaaacgtcatcaccatcatcattaatatcg	Protospacer
*...***.*******.*********** *

100. spacer 1.5|1032399|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to NC_014305 (Erwinia billingiae Eb661 plasmid pEB170, complete sequence) position: , mismatch: 9, identity: 0.719

tggtcgccgggcactccctgagatgatgcgtt	CRISPR spacer
ctatgcccggcccctccctgagatgatgcatg	Protospacer
. .*  **** * ****************.*

101. spacer 1.14|1032948|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to MN693865 (Marine virus AFVG_250M332, complete genome) position: , mismatch: 9, identity: 0.719

gaaccagtgatgggggcgcaggttgatggact	CRISPR spacer
ataacagtgatgggggtgcaggatgattaaga	Protospacer
. * ************.***** **** .*

102. spacer 1.16|1033070|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to KU886225 (Erwinia phage vB_EamM_Deimos-Minion, complete genome) position: , mismatch: 9, identity: 0.719

catcatcaaccagacctcagggcgc--attgaca	CRISPR spacer
tttcatcaaacagacctcatggcgccggttag--	Protospacer
. ******* ********* *****  .**..

103. spacer 1.17|1033131|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to MN693452 (Marine virus AFVG_25M444, complete genome) position: , mismatch: 9, identity: 0.719

acaacacgcaaaccctgcaagttcctgtgtgt	CRISPR spacer
accttttgcaaagcctgtaagttcctgtgtaa	Protospacer
**  . .***** ****.************.

104. spacer 1.17|1033131|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to MN693513 (Marine virus AFVG_25M203, complete genome) position: , mismatch: 9, identity: 0.719

acaacacgcaaaccctgcaagttcctgtgtgt	CRISPR spacer
acctttggcaaagcctgtaagttcctgtgtaa	Protospacer
**  .  ***** ****.************.

105. spacer 1.17|1033131|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to MN693605 (Marine virus AFVG_25M414, complete genome) position: , mismatch: 9, identity: 0.719

acaacacgcaaaccctgcaagttcctgtgtgt	CRISPR spacer
accttttgcaaagcctgtaagttcctgtgtta	Protospacer
**  . .***** ****.************

106. spacer 1.17|1033131|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to MN693215 (Marine virus AFVG_25M456, complete genome) position: , mismatch: 9, identity: 0.719

acaacacgcaaaccctgcaagttcctgtgtgt	CRISPR spacer
accttttgcaaaacctgtaagttcctgtgtaa	Protospacer
**  . .***** ****.************.

107. spacer 2.5|1060415|32|NZ_CP053573|CRISPRCasFinder matches to MN905160 (Pseudomonas phage PE09, complete genome) position: , mismatch: 9, identity: 0.719

accactgttgacatactgctgaccattatggt	CRISPR spacer
ttcactgttgacattctgctgacgatccttac	Protospacer
 .************ ******** **. * ..

108. spacer 2.5|1060415|32|NZ_CP053573|CRISPRCasFinder matches to MH029516 (Gokushovirinae environmental samples clone NHS-Seq188, complete sequence) position: , mismatch: 9, identity: 0.719

accactgttgacatactgctgaccattatggt	CRISPR spacer
cgcgctgttcacatacagctgaccattagccc	Protospacer
  *.***** ****** ***********   .

109. spacer 2.5|1060415|32|NZ_CP053573|CRISPRCasFinder matches to DQ054536 (Lactococcus phage P008, complete genome) position: , mismatch: 9, identity: 0.719

accactgttgacatactgctgaccattatggt	CRISPR spacer
taaactgttgatatactgctgactatcttttt	Protospacer
   ********.***********.**. *  *

110. spacer 2.5|1060415|32|NZ_CP053573|CRISPRCasFinder matches to NC_021852 (Lactococcus phage P680, complete genome) position: , mismatch: 9, identity: 0.719

accactgttgacatactgctgaccattatggt	CRISPR spacer
taaactgttgatatactgctgactatcttttt	Protospacer
   ********.***********.**. *  *

111. spacer 2.5|1060415|32|NZ_CP053573|CRISPRCasFinder matches to KC182542 (Lactococcus phage 340, complete genome) position: , mismatch: 9, identity: 0.719

accactgttgacatactgctgaccattatggt	CRISPR spacer
taaactgttgatatactgctgactatcttttt	Protospacer
   ********.***********.**. *  *

112. spacer 2.5|1060415|32|NZ_CP053573|CRISPRCasFinder matches to NC_049404 (Lactococcus phage 56003, complete genome) position: , mismatch: 9, identity: 0.719

accactgttgacatactgctgaccattatggt	CRISPR spacer
taaactgttgatatactgctgactatcttttt	Protospacer
   ********.***********.**. *  *

113. spacer 2.7|1060526|32|NZ_CP053573|CRISPRCasFinder matches to CP042595 (Streptomyces albogriseolus strain LBX-2 plasmid pSALBX2, complete sequence) position: , mismatch: 9, identity: 0.719

accgctggagactcgctgctcgccatctgtgt	CRISPR spacer
ctcggcatcgactcgctgctcgccatccgggt	Protospacer
 .** ..  ******************.* **

114. spacer 1.3|1032277|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to MN693212 (Marine virus AFVG_25M426, complete genome) position: , mismatch: 10, identity: 0.688

caaatattagatgcaacaggcgaacatattat-	CRISPR spacer
caaatagtagatgcaacagg-agatgccttgca	Protospacer
****** ************* ..*... **..

115. spacer 1.4|1032338|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to MN693429 (Marine virus AFVG_25M409, complete genome) position: , mismatch: 10, identity: 0.688

ccggaacatcatcactatcatcattaaaaaac	CRISPR spacer
agtctacatcattactatcctcattaaatact	Protospacer
     *******.****** ******** * .

116. spacer 1.4|1032338|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to MK774614 (Aeromonas phage CF8, complete genome) position: , mismatch: 10, identity: 0.688

ccggaacatcatcactatcatcattaaaaaac	CRISPR spacer
aacaagcatcatcacgatcataattaaaatta	Protospacer
   .*.********* ***** *******

117. spacer 1.4|1032338|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to MN694484 (Marine virus AFVG_250M1201, complete genome) position: , mismatch: 10, identity: 0.688

ccggaacatcatcactatcatcattaaaaaac	CRISPR spacer
agtctacatcagcactatcttcattaaataca	Protospacer
     ****** ******* ******** *

118. spacer 2.7|1060526|32|NZ_CP053573|CRISPRCasFinder matches to NZ_CP043415 (Escherichia coli strain EC42405 plasmid pNTEC2-42405, complete sequence) position: , mismatch: 10, identity: 0.688

accgctggagactcgctgctcgccatctgtgt	CRISPR spacer
gccgctggaaactcgctgctccccgccacgaa	Protospacer
.********.*********** **..*   .

119. spacer 2.7|1060526|32|NZ_CP053573|CRISPRCasFinder matches to NZ_CP051656 (Escherichia coli strain RM11911 plasmid pRM11911) position: , mismatch: 10, identity: 0.688

accgctggagactcgctgctcgccatctgtgt	CRISPR spacer
gccgctggaaactcgctgctccccgccacgaa	Protospacer
.********.*********** **..*   .

120. spacer 2.7|1060526|32|NZ_CP053573|CRISPRCasFinder matches to NZ_CP042247 (Escherichia coli strain BCE049 plasmid pBCE049-1, complete sequence) position: , mismatch: 10, identity: 0.688

accgctggagactcgctgctcgccatctgtgt	CRISPR spacer
gccgctggaaactcgctgctccccgccacgaa	Protospacer
.********.*********** **..*   .

121. spacer 1.2|1032216|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013524 (Rhizobium phaseoli strain R744 plasmid pRphaR744b, complete sequence) position: , mismatch: 11, identity: 0.656

aaatatttcctgatgctgttaccgttgaatat	CRISPR spacer
ggcctgctcctcatgctgttaccggtgaatgc	Protospacer
.. .  .**** ************ *****..

122. spacer 1.2|1032216|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013553 (Rhizobium phaseoli strain N931 plasmid pRphaN931a, complete sequence) position: , mismatch: 11, identity: 0.656

aaatatttcctgatgctgttaccgttgaatat	CRISPR spacer
ggcctgctcctcatgctgttaccggtgaatgc	Protospacer
.. .  .**** ************ *****..

123. spacer 1.2|1032216|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013586 (Rhizobium phaseoli strain N161 plasmid pRphaN161a, complete sequence) position: , mismatch: 11, identity: 0.656

aaatatttcctgatgctgttaccgttgaatat	CRISPR spacer
ggcctgctcctcatgctgttaccggtgaatgc	Protospacer
.. .  .**** ************ *****..

124. spacer 1.2|1032216|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013559 (Rhizobium phaseoli strain N841 plasmid pRphaN841b, complete sequence) position: , mismatch: 11, identity: 0.656

aaatatttcctgatgctgttaccgttgaatat	CRISPR spacer
ggcctgctcctcatgctgttaccggtgaatgc	Protospacer
.. .  .**** ************ *****..

125. spacer 1.2|1032216|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013528 (Rhizobium phaseoli strain R723 plasmid pRphaR723a, complete sequence) position: , mismatch: 11, identity: 0.656

aaatatttcctgatgctgttaccgttgaatat	CRISPR spacer
ggcctgctcctcatgctgttaccggtgaatgc	Protospacer
.. .  .**** ************ *****..

126. spacer 1.2|1032216|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013538 (Rhizobium phaseoli strain R630 plasmid pRphaR630a, complete sequence) position: , mismatch: 11, identity: 0.656

aaatatttcctgatgctgttaccgttgaatat	CRISPR spacer
ggcctgctcctcatgctgttaccggtgaatgc	Protospacer
.. .  .**** ************ *****..

127. spacer 1.2|1032216|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013564 (Rhizobium phaseoli strain N831 plasmid pRphaN831a, complete sequence) position: , mismatch: 11, identity: 0.656

aaatatttcctgatgctgttaccgttgaatat	CRISPR spacer
ggcctgctcctcatgctgttaccggtgaatgc	Protospacer
.. .  .**** ************ *****..

128. spacer 1.2|1032216|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013581 (Rhizobium phaseoli strain N261 plasmid pRphaN261a, complete sequence) position: , mismatch: 11, identity: 0.656

aaatatttcctgatgctgttaccgttgaatat	CRISPR spacer
ggcctgctcctcatgctgttaccggtgaatgc	Protospacer
.. .  .**** ************ *****..

129. spacer 1.3|1032277|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to NC_014718 (Paraburkholderia rhizoxinica HKI 454 plasmid pBRH01, complete sequence) position: , mismatch: 11, identity: 0.656

caaatattagatgcaacaggcgaacatattat	CRISPR spacer
tcgcagctaaatgcaacaggcgaagatattcc	Protospacer
. .  ..**.************** ***** .

130. spacer 1.3|1032277|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to NC_014723 (Paraburkholderia rhizoxinica HKI 454 plasmid pBRH02, complete sequence) position: , mismatch: 11, identity: 0.656

caaatattagatgcaacaggcgaacatattat	CRISPR spacer
tcgcagctaaatgcaacaggcgaagatattcc	Protospacer
. .  ..**.************** ***** .

131. spacer 1.4|1032338|32|NZ_CP053573|PILER-CR,CRISPRCasFinder,CRT matches to AP014437 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C27-MedDCM-OCT-S26-C121, *** SEQUENCING IN PROGRESS ***, 5 ordered pieces) position: , mismatch: 11, identity: 0.656

ccggaacatcatcactatcatcattaaaaaac	CRISPR spacer
tatcttcatcatcactatcttcatcaaaatct	Protospacer
.     ************* ****.****  .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

497613 : 505264

Thermobifida_phage(16.67%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003025085.1\|497613_498468_-	RNase adapter RapZ	A0A0R8VB27	Thermobifida_phage	1.4e-05	28.4
WP_016154690.1\|498513_499005_-	PTS IIA-like nitrogen regulatory protein PtsN	NA	NA	NA	NA
WP_003025078.1\|499088_499376_-	ribosome hibernation promoting factor	A0A0M7QCF2	Escherichia_phage	4.2e-10	43.2
WP_016154689.1\|499398_500832_-	RNA polymerase factor sigma-54	NA	NA	NA	NA
WP_003025073.1\|500878_501604_-	LPS export ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	3.2e-22	28.4
WP_047358523.1\|501610_502159_-	lipopolysaccharide ABC transporter substrate-binding protein LptA	NA	NA	NA	NA
WP_047358522.1\|502127_502703_-	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA
WP_046276014.1\|502699_503266_-	3-deoxy-manno-octulosonate-8-phosphatase KdsC	A0A140XBD6	Dickeya_phage	2.5e-54	76.3
WP_080859548.1\|503286_504273_-	arabinose-5-phosphate isomerase KdsD	A0A2P0VNK5	Tetraselmis_virus	3.9e-39	31.5
WP_016154684.1\|504286_505264_-	calcium/sodium antiporter	A0A2D1GNI8	Pseudoalteromonas_phage	8.1e-05	23.0

DBSCAN-SWA_2

1199309 : 1271520

Enterobacteria_phage(38.64%)

portal,head,tRNA,capsid,tail,terminase,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_095715242.1\|1199309_1200482_-	DUF3596 domain-containing protein	I6PDJ1	Cronobacter_phage	3.6e-148	67.7
WP_095715241.1\|1200689_1201556_-	hypothetical protein	NA	NA	NA	NA
WP_095715240.1\|1202131_1202413_-	hypothetical protein	NA	NA	NA	NA
WP_033816624.1\|1202602_1203229_-	LexA family transcriptional regulator	K7PM82	Enterobacteria_phage	3.2e-47	49.3
WP_003826141.1\|1203331_1203559_+	cell division protein	NA	NA	NA	NA
WP_003826142.1\|1203569_1204121_+	hypothetical protein	A0A1C9II13	Salmonella_phage	6.1e-66	68.4
WP_095715239.1\|1204293_1204473_+	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	2.5e-13	71.2
WP_095715238.1\|1204462_1205320_+	conserved phage C-terminal domain-containing protein	A0A1C9IHW0	Salmonella_phage	7.5e-71	87.9
WP_033816620.1\|1205316_1206198_+	phage N-6-adenine-methyltransferase	Q8HA94	Salmonella_phage	4.4e-143	84.5
WP_095715237.1\|1206190_1208071_+	DNA cytosine methyltransferase	H9C171	Pectobacterium_phage	3.6e-203	55.4
WP_095715236.1\|1208067_1208454_+	RusA family crossover junction endodeoxyribonuclease	A0A192Y8N5	Salmonella_phage	2.0e-60	87.6
WP_095715235.1\|1208467_1209154_+	phage antirepressor KilAC domain-containing protein	G0ZND1	Cronobacter_phage	4.5e-58	53.3
WP_095715234.1\|1209150_1210140_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	9.0e-145	71.7
WP_095715233.1\|1210154_1210517_+	DUF1133 family protein	K7PGW2	Enterobacterial_phage	2.0e-57	92.5
WP_095715232.1\|1210568_1211384_-	TIR domain-containing protein	K7PLZ9	Enterobacterial_phage	1.1e-84	58.3
WP_008323296.1\|1211627_1212023_+\|holin	phage holin family protein	K7PHB9	Enterobacterial_phage	2.6e-50	81.7
WP_008323297.1\|1212009_1212291_+\|holin	phage holin family protein	K7PKN9	Enterobacterial_phage	4.2e-39	88.2
WP_095715231.1\|1212290_1212905_+	glycoside hydrolase family 19 protein	Q8HA86	Salmonella_phage	5.0e-93	81.9
WP_080100495.1\|1212912_1213182_+	hypothetical protein	G8C7W1	Escherichia_phage	1.7e-21	70.1
WP_095715230.1\|1214124_1214580_+	hypothetical protein	NA	NA	NA	NA
WP_141244066.1\|1214666_1215194_-	hypothetical protein	NA	NA	NA	NA
WP_000453624.1\|1215467_1216013_+\|terminase	terminase small subunit	E4WL18	Enterobacteria_phage	1.2e-95	100.0
WP_095715229.1\|1215987_1217910_+\|terminase	phage terminase large subunit family protein	E4WL19	Enterobacteria_phage	0.0e+00	97.7
WP_003034782.1\|1217909_1218116_+	gpW family protein	K7PM10	Enterobacteria_phage	3.2e-28	95.5
WP_095715228.1\|1218112_1219705_+\|portal	phage portal protein	E4WL21	Enterobacteria_phage	6.3e-289	91.7
WP_095715227.1\|1219685_1221023_+	S49 family peptidase	O64320	Escherichia_phage	4.6e-184	78.3
WP_095715226.1\|1221032_1221365_+\|head	head decoration protein	E4WL24	Enterobacteria_phage	1.2e-45	78.2
WP_095715225.1\|1221432_1222458_+\|capsid	major capsid protein	K7PGW9	Enterobacteria_phage	1.6e-181	92.1
WP_095715224.1\|1222503_1222908_+	DNA-packaging protein	K7PM13	Enterobacteria_phage	5.5e-24	55.2
WP_095715223.1\|1222919_1223273_+\|tail	phage tail protein	K7P6U9	Enterobacteria_phage	1.2e-46	75.2
WP_095715222.1\|1223282_1223837_+\|tail	phage tail protein	K7P7A8	Enterobacteria_phage	1.6e-74	91.4
WP_032938647.1\|1223833_1224232_+\|tail	tail protein	K7P7G5	Enterobacteria_phage	6.1e-60	81.8
WP_095715221.1\|1224239_1224977_+	Ig-like domain-containing protein	O64327	Escherichia_phage	8.9e-89	66.1
WP_095715220.1\|1225013_1225421_+\|tail	phage minor tail protein G	K7PM17	Enterobacteria_phage	1.2e-26	60.0
WP_095715219.1\|1225429_1225750_+\|tail	phage tail assembly protein T	K7PHE1	Enterobacteria_phage	4.6e-34	68.9
WP_095715218.1\|1225727_1228244_+\|tail	phage tail tape measure protein	K7PKR0	Enterobacteria_phage	0.0e+00	70.6
WP_079895762.1\|1228247_1228595_+\|tail	phage tail protein	K7PJT2	Enterobacteria_phage	1.4e-39	70.4
WP_095715217.1\|1228591_1229347_+\|tail	phage minor tail protein L	K7PGX3	Enterobacteria_phage	5.3e-129	85.3
WP_095715216.1\|1229348_1230059_+	C40 family peptidase	K7P6F5	Enterobacteria_phage	9.4e-136	89.8
WP_095715254.1\|1230090_1230426_+	hypothetical protein	NA	NA	NA	NA
WP_095715215.1\|1230478_1231081_+\|tail	tail assembly protein	K7PM97	Enterobacterial_phage	1.1e-76	75.2
WP_095715214.1\|1231135_1231852_+	YnfC family lipoprotein	NA	NA	NA	NA
WP_095715213.1\|1231903_1235110_+	host specificity protein J	O64335	Escherichia_phage	0.0e+00	87.0
WP_094169308.1\|1235109_1236054_+	hypothetical protein	H6WRW5	Salmonella_phage	2.1e-122	69.0
WP_095715212.1\|1236063_1237425_+\|tail	phage tail protein	A0A1V0E5M2	Salmonella_phage	7.1e-116	53.6
WP_003840850.1\|1237559_1237802_-	DinI family protein	Q6UAW0	Klebsiella_phage	1.5e-29	77.9
WP_095715211.1\|1237879_1238299_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	8.8e-33	55.9
WP_095715210.1\|1238301_1239570_+	Y-family DNA polymerase	I6RSM4	Salmonella_phage	4.2e-203	80.1
WP_095715253.1\|1239774_1240593_-	pentapeptide repeat-containing protein	NA	NA	NA	NA
WP_095715209.1\|1241184_1241856_-	SOS response-associated peptidase	A0A2H4J5W2	uncultured_Caudovirales_phage	1.3e-78	59.5
WP_095715856.1\|1242319_1243255_-	hypothetical protein	NA	NA	NA	NA
WP_085951071.1\|1243972_1245136_-	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_095715855.1\|1245143_1247330_-	type I secretion system permease/ATPase	F2Y302	Organic_Lake_phycodnavirus	5.5e-17	29.8
WP_046275995.1\|1247326_1248736_-	TolC family outer membrane protein	NA	NA	NA	NA
WP_168726135.1\|1248836_1260134_-	BapA prefix-like domain-containing protein	NA	NA	NA	NA
WP_003031211.1\|1260715_1261198_-	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	1.2e-28	46.8
WP_071600335.1\|1261340_1261796_+	type II toxin-antitoxin system toxin RatA	NA	NA	NA	NA
WP_003839823.1\|1261779_1262076_+	RnfH family protein	NA	NA	NA	NA
WP_003826401.1\|1262126_1262471_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA
WP_080860766.1\|1262620_1264282_-	DNA repair protein RecN	NA	NA	NA	NA
WP_016154073.1\|1264367_1265246_-	NAD(+) kinase	NA	NA	NA	NA
WP_003031221.1\|1265368_1265962_+	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_008785520.1\|1266012_1267302_-	HlyC/CorC family transporter	NA	NA	NA	NA
WP_003031224.1\|1267320_1268112_-	inner membrane protein YpjD	NA	NA	NA	NA
WP_003031226.1\|1268277_1269639_+	signal recognition particle protein	NA	NA	NA	NA
WP_003031228.1\|1269892_1270141_+	30S ribosomal protein S16	NA	NA	NA	NA
WP_003031230.1\|1270159_1270708_+	ribosome maturation factor RimM	NA	NA	NA	NA
WP_016157187.1\|1270752_1271520_+\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA

DBSCAN-SWA_3

1509910 : 1586097

Cronobacter_phage(32.56%)

portal,head,transposase,tRNA,integrase,tail,capsid,plate,terminase,holin

attL 1552019:1552033|attR 1588446:1588460

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_079778750.1\|1509910_1510369_+\|transposase	IS200/IS605 family transposase	I4AZI8	Saccharomonospora_phage	3.4e-14	31.5
WP_010723117.1\|1510493_1510565_-	membrane protein YpdK	NA	NA	NA	NA
WP_080858943.1\|1510908_1511523_+	DUF1311 domain-containing protein	NA	NA	NA	NA
WP_047358777.1\|1511563_1512484_-	kdo(2)-lipid IV(A) palmitoleoyltransferase	A0A1W6JP29	Morganella_phage	3.2e-75	54.3
WP_016153891.1\|1512926_1513169_+	YfdY family protein	NA	NA	NA	NA
WP_016153890.1\|1513252_1514644_-	phosphoglycerate transporter PgtP	NA	NA	NA	NA
WP_141244110.1\|1515059_1516259_+	phosphoglycerate transport regulator PgtC	NA	NA	NA	NA
WP_172864456.1\|1516270_1518265_+	two-component system sensor histidine kinase PgtB	NA	NA	NA	NA
WP_016153887.1\|1518254_1519502_+	two-component system response regulator PgtA	NA	NA	NA	NA
WP_016153886.1\|1519606_1520146_-	DUF2058 domain-containing protein	NA	NA	NA	NA
WP_016153885.1\|1520520_1522419_+	methyl-accepting chemotaxis protein	NA	NA	NA	NA
WP_080858940.1\|1522485_1523517_-	isoaspartyl peptidase/L-asparaginase	NA	NA	NA	NA
WP_080858939.1\|1523834_1524467_+	DNA-binding protein	NA	NA	NA	NA
WP_047416338.1\|1524661_1525603_-	formate/nitrite transporter family protein	E7DYY8	Enterobacteria_phage	1.3e-148	88.1
WP_003028190.1\|1525891_1526647_+	phospholipid-binding lipoprotein MlaA	NA	NA	NA	NA
WP_016157062.1\|1526706_1527987_-	long-chain fatty acid transporter FadL	NA	NA	NA	NA
WP_003834838.1\|1528358_1528643_+	YfcZ/YiiS family protein	NA	NA	NA	NA
WP_016153879.1\|1528819_1530130_+	acetyl-CoA C-acyltransferase FadI	NA	NA	NA	NA
WP_095715765.1\|1530129_1532277_+	fatty acid oxidation complex subunit alpha FadJ	NA	NA	NA	NA
WP_003028179.1\|1532485_1532971_+	phosphohistidine phosphatase SixA	NA	NA	NA	NA
WP_095715766.1\|1533051_1533603_-	endonuclease SmrB	NA	NA	NA	NA
WP_003028173.1\|1533769_1534702_+	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA
WP_003028170.1\|1534741_1535827_+	chorismate synthase	A0A291AU41	Pandoravirus	5.9e-89	47.0
WP_016153875.1\|1535830_1536655_+	penicillin-insensitive murein endopeptidase	NA	NA	NA	NA
WP_095715767.1\|1536654_1537464_+	TSUP family transporter	NA	NA	NA	NA
WP_016153873.1\|1537463_1538012_+	elongation factor P hydroxylase	NA	NA	NA	NA
WP_016157057.1\|1538044_1538323_+	YfcL family protein	NA	NA	NA	NA
WP_080858938.1\|1538426_1540427_-\|tRNA	bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC	NA	NA	NA	NA
WP_016157055.1\|1540586_1541807_+	beta-ketoacyl-ACP synthase I	NA	NA	NA	NA
WP_019077303.1\|1541860_1542385_-	YbjP/YqhG family protein	NA	NA	NA	NA
WP_016153865.1\|1543313_1544492_+	MFS transporter	NA	NA	NA	NA
WP_053389555.1\|1544488_1545490_-	flagella biosynthesis regulator Flk	NA	NA	NA	NA
WP_141244109.1\|1546016_1546760_+	DUF4875 domain-containing protein	D4HTW8	Vibrio_phage	1.5e-19	39.6
WP_168726188.1\|1546801_1547539_-	site-specific DNA-methyltransferase	Q775B4	Bordetella_phage	2.3e-60	50.4
WP_095715771.1\|1547543_1547735_-	Com family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_095715772.1\|1547980_1548121_-	Hok/Gef family protein	A0A0A7NPZ4	Enterobacteria_phage	2.6e-18	97.8
WP_095715773.1\|1548956_1550657_-	hypothetical protein	F1BUJ7	Cronobacter_phage	2.0e-107	40.7
WP_095715774.1\|1550653_1551229_-	hypothetical protein	F1BUJ9	Cronobacter_phage	5.1e-31	45.9
WP_095715775.1\|1551200_1551923_-	hypothetical protein	Q94MX8	Haemophilus_virus	2.6e-08	21.6
WP_095715776.1\|1551919_1552486_-	DUF4376 domain-containing protein	A0A0U2QQK4	Escherichia_phage	3.1e-81	79.0
1552019:1552033	attL	NA	NA	NA	NA
WP_095715777.1\|1554074_1554635_-\|tail	tail fiber assembly protein	Q8W612	Enterobacteria_phage	5.4e-54	56.7
WP_095715778.1\|1554637_1556299_-\|tail	phage tail protein	F1BUK3	Cronobacter_phage	2.2e-58	40.9
WP_095715779.1\|1556295_1556931_-	hypothetical protein	F1BUK5	Cronobacter_phage	3.7e-51	54.9
WP_095715780.1\|1556927_1558112_-\|plate	baseplate J/gp47 family protein	F1BUK6	Cronobacter_phage	4.0e-139	61.3
WP_095715781.1\|1558104_1558455_-	DUF2590 family protein	F1BUK8	Cronobacter_phage	2.3e-26	67.3
WP_168726129.1\|1558444_1560616_-\|tail	phage tail tape measure protein	Q94MY4	Haemophilus_virus	2.8e-114	38.8
WP_168726128.1\|1560615_1560762_-	hypothetical protein	A5X9I8	Aeromonas_virus	5.4e-06	51.1
WP_095715783.1\|1560803_1561091_-	hypothetical protein	A5X9I7	Aeromonas_virus	1.1e-15	48.8
WP_095715784.1\|1561163_1561505_-	M15 family metallopeptidase	F1BUL3	Cronobacter_phage	6.4e-42	79.2
WP_095715785.1\|1561614_1561911_-\|holin	phage holin family protein	C7BGD7	Burkholderia_phage	1.5e-15	44.7
WP_095715786.1\|1561914_1562370_-	DUF2597 family protein	A5X9I1	Aeromonas_virus	6.4e-37	51.0
WP_095715787.1\|1562366_1563515_-	DUF2586 family protein	F1BUL5	Cronobacter_phage	8.4e-110	56.8
WP_095715788.1\|1563535_1564246_-	phage virion morphogenesis protein	F1BUL6	Cronobacter_phage	6.7e-33	42.1
WP_095715789.1\|1564245_1564719_-\|tail	phage tail protein	NA	NA	NA	NA
WP_095715822.1\|1564728_1565223_-\|head	head completion/stabilization protein	F1BUL8	Cronobacter_phage	4.5e-28	42.5
WP_095715790.1\|1565321_1566032_-\|terminase	terminase	F1BUM0	Cronobacter_phage	3.5e-58	48.1
WP_095715791.1\|1565988_1567062_-\|capsid	phage major capsid protein, P2 family	F1BUM2	Cronobacter_phage	4.2e-103	58.5
WP_095715792.1\|1567076_1567964_-\|capsid	GPO family capsid scaffolding protein	R9TRS3	Vibrio_phage	2.1e-39	42.0
WP_095715793.1\|1568153_1569932_+\|terminase	terminase	F1BUM5	Cronobacter_phage	6.5e-194	56.6
WP_095715794.1\|1569924_1570959_+\|portal	phage portal protein	Q94MZ7	Haemophilus_virus	2.5e-89	53.5
WP_095715823.1\|1570967_1571282_+	ogr/Delta-like zinc finger family protein	F1BUM8	Cronobacter_phage	1.5e-16	46.1
WP_095715795.1\|1571377_1571665_-	hypothetical protein	NA	NA	NA	NA
WP_095715796.1\|1571730_1572009_-	hypothetical protein	NA	NA	NA	NA
WP_095715797.1\|1572324_1572639_-	peptide transporter	A0A0A7NPT5	Enterobacteria_phage	5.6e-16	48.1
WP_095715798.1\|1572646_1573600_-	plasmid segregation protein ParM	A0A0A7NPX4	Enterobacteria_phage	6.2e-175	97.2
WP_095715824.1\|1573676_1576424_-	replication endonuclease	A0A0A7NQ77	Enterobacteria_phage	0.0e+00	67.1
WP_095715799.1\|1576482_1576839_-	hypothetical protein	A0A0A7NRY1	Enterobacteria_phage	1.5e-25	53.1
WP_095715800.1\|1576835_1577453_-	ash family protein	K7PLX4	Enterobacteria_phage	3.2e-15	59.1
WP_095715825.1\|1577560_1577752_-	hypothetical protein	A0A0A7NRX6	Enterobacteria_phage	4.0e-09	69.2
WP_095715802.1\|1578056_1578395_-	hypothetical protein	NA	NA	NA	NA
WP_095715803.1\|1578402_1578816_-	hypothetical protein	NA	NA	NA	NA
WP_141244111.1\|1579038_1579281_-	DUF4754 family protein	NA	NA	NA	NA
WP_095715805.1\|1579313_1579586_-	hypothetical protein	A0A0A7NRX5	Enterobacteria_phage	1.7e-13	48.2
WP_095715806.1\|1579593_1579947_-	DUF4761 family protein	A0A0A7NV42	Enterobacteria_phage	5.6e-49	80.2
WP_141244112.1\|1580090_1580327_+	hypothetical protein	NA	NA	NA	NA
WP_095715807.1\|1580809_1581097_-	hypothetical protein	A0A0M4RCW1	Salmonella_phage	3.3e-23	53.7
WP_141244113.1\|1581209_1581797_+	helix-turn-helix domain-containing protein	Q1JS45	Enterobacteria_phage	6.0e-11	43.8
WP_095715827.1\|1581893_1582904_+\|integrase	tyrosine-type recombinase/integrase	A0A0M4RTQ0	Salmonella_phage	3.1e-100	56.3
WP_095715808.1\|1583046_1584204_+	4-phosphoerythronate dehydrogenase PdxB	A0A2R8FDS8	Brazilian_cedratvirus	1.2e-18	26.3
WP_016157051.1\|1584271_1585285_+	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_016157050.1\|1585284_1586097_+\|tRNA	tRNA pseudouridine(38-40) synthase TruA	NA	NA	NA	NA
1588446:1588460	attR	NA	NA	NA	NA

DBSCAN-SWA_4

1796275 : 1882865

Cronobacter_phage(40.91%)

protease,portal,head,tRNA,integrase,capsid,tail,terminase,plate,holin

attL 1848098:1848119|attR 1881333:1881354

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_016153694.1\|1796275_1797223_+	ABC transporter ATP-binding protein	F2Y1V5	Organic_Lake_phycodnavirus	2.9e-07	25.1
WP_019077213.1\|1797206_1797938_+	ABC transporter permease	NA	NA	NA	NA
WP_003027354.1\|1797918_1798026_-	protein YohO	NA	NA	NA	NA
WP_016153692.1\|1798100_1798832_-	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	1.0e-105	93.0
WP_016153691.1\|1799057_1800743_+	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	5.6e-280	91.4
WP_016153690.1\|1800739_1801459_+	two-component system response regulator BtsR	NA	NA	NA	NA
WP_016156965.1\|1801505_1801976_+	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	8.3e-64	77.6
WP_047416218.1\|1802018_1802477_-	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	5.4e-52	73.2
WP_016156963.1\|1802684_1804718_-\|tRNA	methionine--tRNA ligase	A0A1V0SDF2	Indivirus	1.2e-53	27.4
WP_016153686.1\|1804882_1805992_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA
WP_016153685.1\|1806256_1806538_+	DUF2574 family protein	NA	NA	NA	NA
WP_016156961.1\|1806810_1807350_+	fimbrial protein YehD	NA	NA	NA	NA
WP_080858895.1\|1807413_1808094_+	fimbrial assembly chaperone	NA	NA	NA	NA
WP_080858894.1\|1808107_1810594_+	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_046275443.1\|1810605_1811589_+	fimbrial protein	NA	NA	NA	NA
WP_019077205.1\|1811642_1811975_-	RcnB family protein	NA	NA	NA	NA
WP_053388836.1\|1812324_1813113_+	hydroxyethylthiazole kinase	NA	NA	NA	NA
WP_016156956.1\|1813109_1813910_+	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA
WP_065554089.1\|1813951_1814698_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_065554090.1\|1814671_1815637_-	sugar kinase	NA	NA	NA	NA
WP_049281967.1\|1815633_1816638_-	ADP-ribosylglycohydrolase family protein	A0A1S6UB21	Serratia_phage	6.4e-13	28.1
WP_016153674.1\|1816634_1817912_-	MFS transporter	NA	NA	NA	NA
WP_016153672.1\|1818164_1819217_+	class I fructose-bisphosphate aldolase	NA	NA	NA	NA
WP_046275436.1\|1819239_1820139_-	lipid kinase YegS	A0A1V0SBJ0	Catovirus	1.3e-12	28.4
WP_016153670.1\|1820270_1821002_-	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_016153669.1\|1821248_1821917_-	arginine ABC transporter permease ArtM	NA	NA	NA	NA
WP_016153668.1\|1821916_1822633_-	arginine ABC transporter permease ArtQ	NA	NA	NA	NA
WP_003027298.1\|1822639_1823371_-	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_016156950.1\|1823387_1824116_-	arginine ABC transporter ATP-binding protein ArtP	G9BWD6	Planktothrix_phage	8.7e-28	36.0
WP_016153666.1\|1824341_1824857_-	lipoprotein	NA	NA	NA	NA
WP_001160725.1\|1825108_1825432_+	heavy metal-binding domain-containing protein	NA	NA	NA	NA
WP_065554093.1\|1825428_1826259_+	N-acetylmuramoyl-L-alanine amidase	NA	NA	NA	NA
WP_016153664.1\|1826255_1827269_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_016156947.1\|1827363_1828797_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_016153662.1\|1828807_1829809_-	low-specificity L-threonine aldolase	NA	NA	NA	NA
WP_016156946.1\|1829845_1831564_-	ubiquinone-dependent pyruvate dehydrogenase	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	6.8e-31	24.0
WP_080858891.1\|1831716_1832151_+	DoxX family protein	NA	NA	NA	NA
WP_080858890.1\|1832223_1833840_-	FAD-NAD(P)-binding protein	NA	NA	NA	NA
WP_016153658.1\|1834041_1835010_-	NADH oxidoreductase	NA	NA	NA	NA
WP_016153657.1\|1835020_1836673_-	hydroxylamine reductase	NA	NA	NA	NA
WP_016153656.1\|1836828_1837728_-	lysine exporter LysO family protein	NA	NA	NA	NA
WP_095715440.1\|1837870_1838566_-	aquaporin Z	NA	NA	NA	NA
WP_016153655.1\|1838938_1840597_+	ATP-dependent endonuclease	NA	NA	NA	NA
WP_047359135.1\|1840593_1841541_-	DUF535 domain-containing protein	NA	NA	NA	NA
WP_016156938.1\|1841701_1842817_+	macrolide transporter subunit MacA	NA	NA	NA	NA
WP_080858888.1\|1842813_1844760_+	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	6.3e-41	41.4
WP_003036813.1\|1844834_1845059_-	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	3.6e-17	62.7
WP_003036810.1\|1845382_1845703_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	3.5e-13	45.7
WP_016153651.1\|1845733_1848010_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.4e-164	42.1
1848098:1848119	attL	NA	NA	NA	NA
WP_095715439.1\|1848203_1849211_-\|integrase	tyrosine-type recombinase/integrase	Q83VS6	Escherichia_phage	2.4e-169	86.3
WP_095715438.1\|1849356_1849656_-	helix-turn-helix transcriptional regulator	Q1JS61	Enterobacteria_phage	8.7e-43	86.9
WP_079895560.1\|1849777_1850053_+	hypothetical protein	Q1JS60	Enterobacteria_phage	2.3e-42	86.7
WP_141244083.1\|1850149_1850335_+	hypothetical protein	NA	NA	NA	NA
WP_095715436.1\|1850335_1850683_+	hypothetical protein	NA	NA	NA	NA
WP_095715435.1\|1850687_1851149_-	hypothetical protein	NA	NA	NA	NA
WP_000366435.1\|1851287_1851509_+	DUF2724 domain-containing protein	A0A0M4S6M9	Salmonella_phage	1.7e-11	50.0
WP_172864457.1\|1851530_1851914_+	hypothetical protein	NA	NA	NA	NA
WP_095715433.1\|1851984_1852962_+	Dam family site-specific DNA-(adenine-N6)-methyltransferase	A0A0M4QWR0	Salmonella_phage	7.9e-101	60.7
WP_053897720.1\|1852961_1853183_+	hypothetical protein	NA	NA	NA	NA
WP_095715432.1\|1853175_1855782_+	replication endonuclease	A0A1S6L028	Salmonella_phage	5.9e-127	37.4
WP_095715431.1\|1855873_1857229_-	hypothetical protein	R9TRQ8	Vibrio_phage	1.7e-21	28.3
WP_095715430.1\|1857283_1859119_-	hypothetical protein	NA	NA	NA	NA
WP_077917731.1\|1859171_1859447_-	ogr/Delta-like zinc finger family protein	F1BUM8	Cronobacter_phage	3.1e-26	60.7
WP_095715429.1\|1859494_1860556_-\|portal	phage portal protein	F1BUM7	Cronobacter_phage	8.0e-123	61.0
WP_095715428.1\|1860552_1862364_-	hypothetical protein	F1BUM5	Cronobacter_phage	4.8e-184	54.2
WP_095715427.1\|1862541_1863603_+\|capsid	GPO family capsid scaffolding protein	F1BUM4	Cronobacter_phage	6.5e-32	42.8
WP_001177621.1\|1863631_1864654_+\|capsid	phage major capsid protein, P2 family	F1BUM2	Cronobacter_phage	5.0e-98	55.4
WP_095715426.1\|1864656_1865358_+\|terminase	terminase	F1BUM0	Cronobacter_phage	5.7e-69	57.1
WP_095715425.1\|1865460_1865934_+\|head	head completion/stabilization protein	F1BUL8	Cronobacter_phage	9.3e-31	54.3
WP_046274985.1\|1865930_1866407_+\|tail	phage tail protein	NA	NA	NA	NA
WP_141244084.1\|1866442_1867099_+	hypothetical protein	F1BUL6	Cronobacter_phage	6.6e-67	58.9
WP_095715423.1\|1867101_1868244_+	DUF2586 family protein	F1BUL5	Cronobacter_phage	1.7e-131	62.1
WP_075848319.1\|1868247_1868703_+	DUF2597 family protein	A5X9I1	Aeromonas_virus	1.1e-39	53.0
WP_000980879.1\|1868707_1869019_+\|holin	holin	NA	NA	NA	NA
WP_046274983.1\|1869005_1869344_+	M15 family metallopeptidase	F1BUL3	Cronobacter_phage	3.1e-44	84.2
WP_095715422.1\|1869343_1869727_+	hypothetical protein	A0A2I6PD12	Escherichia_phage	1.4e-05	39.5
WP_001656609.1\|1869829_1870099_+	hypothetical protein	NA	NA	NA	NA
WP_095715421.1\|1870107_1870287_+	hypothetical protein	A5X9I8	Aeromonas_virus	4.9e-09	63.0
WP_095715420.1\|1870288_1872403_+\|tail	phage tail tape measure protein	F1BUK9	Cronobacter_phage	1.3e-140	41.4
WP_006624195.1\|1872399_1872735_+	DUF2590 family protein	F1BUK8	Cronobacter_phage	5.6e-30	59.6
WP_095715419.1\|1872727_1873912_+\|plate	baseplate J/gp47 family protein	F1BUK6	Cronobacter_phage	4.0e-155	69.2
WP_046274978.1\|1873904_1874498_+	protein phage	F1BUK5	Cronobacter_phage	2.1e-72	64.3
WP_095715418.1\|1874509_1876468_+\|tail	phage tail protein	F1BUK3	Cronobacter_phage	1.4e-125	68.0
WP_095715417.1\|1876467_1877055_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	2.4e-60	57.1
WP_095715416.1\|1877044_1877767_+	hypothetical protein	F1BUK1	Cronobacter_phage	1.5e-40	40.3
WP_095715415.1\|1877738_1878281_+	hypothetical protein	F1BUJ9	Cronobacter_phage	4.2e-43	55.5
WP_095715414.1\|1878288_1880013_+	hypothetical protein	F1BUJ7	Cronobacter_phage	1.1e-174	62.4
WP_006683890.1\|1881503_1882865_-\|tRNA	tRNA 5-hydroxyuridine modification protein YegQ	Q6DW11	Phage_TP	2.8e-205	93.4
1881333:1881354	attR	NA	NA	NA	NA

DBSCAN-SWA_5

2851045 : 2937671

Klebsiella_phage(26.92%)

protease,portal,head,tail,capsid,terminase,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003034964.1\|2851045_2851927_-\|protease	protease HtpX	NA	NA	NA	NA
WP_029139508.1\|2852119_2854168_-	carboxy terminal-processing peptidase	A0A0R6PIZ1	Moraxella_phage	1.0e-86	33.6
WP_003833781.1\|2854187_2854874_-	RNA chaperone ProQ	NA	NA	NA	NA
WP_016152783.1\|2854970_2855468_-	GAF domain-containing protein	NA	NA	NA	NA
WP_016152782.1\|2855596_2856880_+	membrane integrity lipid transport subunit YebS	NA	NA	NA	NA
WP_019076590.1\|2856848_2859482_+	PqiB family protein	NA	NA	NA	NA
WP_141244090.1\|2859505_2860987_+	16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF	NA	NA	NA	NA
WP_029139506.1\|2861087_2861324_+	DUF1480 family protein	NA	NA	NA	NA
WP_016152779.1\|2861426_2861618_+	YebW family protein	NA	NA	NA	NA
WP_080858674.1\|2861618_2862260_-	protein-serine/threonine phosphatase	A0A222YWF0	Escherichia_phage	3.6e-54	48.1
WP_080858673.1\|2862337_2863618_-	hypothetical protein	NA	NA	NA	NA
WP_003833793.1\|2864198_2864537_-	YebY family protein	NA	NA	NA	NA
WP_049271209.1\|2864557_2865430_-	copper homeostasis membrane protein CopD	NA	NA	NA	NA
WP_080858671.1\|2865433_2865808_-	CopC domain-containing protein YobA	NA	NA	NA	NA
WP_003034925.1\|2865951_2866182_+	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	1.0e-14	60.3
WP_016156222.1\|2866288_2866945_+	carbon-nitrogen hydrolase family protein	NA	NA	NA	NA
WP_016152773.1\|2866968_2867631_+	exodeoxyribonuclease X	Q6UAU3	Klebsiella_phage	9.1e-08	31.1
WP_172864451.1\|2867612_2869688_-	oligopeptidase B	NA	NA	NA	NA
WP_016156220.1\|2869774_2870434_-	tellurite resistance TerB family protein	NA	NA	NA	NA
WP_016152770.1\|2870535_2870889_-	hypothetical protein	NA	NA	NA	NA
WP_003833810.1\|2871010_2871301_-	DNA damage-inducible protein YebG	NA	NA	NA	NA
WP_080858669.1\|2871433_2872612_+	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA
WP_016152768.1\|2872678_2873320_-	bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase	NA	NA	NA	NA
WP_047358576.1\|2873354_2875166_-	phosphogluconate dehydratase	NA	NA	NA	NA
WP_003034896.1\|2875398_2876874_-	glucose-6-phosphate dehydrogenase	H6WFS4	Cyanophage	8.3e-78	37.1
WP_080858668.1\|2877242_2878112_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_095715536.1\|2878230_2879673_+	pyruvate kinase	NA	NA	NA	NA
WP_080858667.1\|2879719_2880691_-	lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase	NA	NA	NA	NA
WP_016152763.1\|2880810_2882130_-	murein DD-endopeptidase MepM	A8ATH6	Listeria_phage	1.5e-14	36.8
WP_019076521.1\|2882145_2883090_-	zinc ABC transporter substrate-binding protein ZnuA	NA	NA	NA	NA
WP_016152761.1\|2883168_2883924_+	zinc ABC transporter ATP-binding protein ZnuC	G3M9Y6	Bacillus_virus	1.3e-18	28.8
WP_080858666.1\|2883920_2884706_+	zinc ABC transporter permease subunit ZnuB	NA	NA	NA	NA
WP_046276027.1\|2885409_2886267_+	protein YibB	A0A292GL11	Xanthomonas_phage	1.0e-06	29.1
WP_095715857.1\|2887926_2888322_-	YdeI family stress tolerance OB fold protein	A0A1I9LJU6	Stx_converting_phage	2.7e-07	38.2
WP_095715867.1\|2888462_2888966_+	hypothetical protein	NA	NA	NA	NA
WP_095715858.1\|2888975_2889422_+	DUF421 domain-containing protein	NA	NA	NA	NA
WP_095715859.1\|2889431_2889944_+	2-oxo-tetronate isomerase	NA	NA	NA	NA
WP_095715860.1\|2889990_2890497_-	ferritin-like domain-containing protein	NA	NA	NA	NA
WP_016152754.1\|2890521_2891019_-	ferritin-like domain-containing protein	NA	NA	NA	NA
WP_016152753.1\|2891111_2891297_-	general stress protein	NA	NA	NA	NA
WP_170928016.1\|2891672_2892545_+	SDR family oxidoreductase	A0A2N9QUX2	Trichoplusia_ni_ascovirus	6.4e-78	53.7
WP_016152751.1\|2892863_2893121_+	hypothetical protein	NA	NA	NA	NA
WP_016152749.1\|2893868_2895428_-	EAL domain-containing protein	NA	NA	NA	NA
WP_095715861.1\|2895846_2896434_-	DUF4376 domain-containing protein	Q7BQC6	Enterobacteria_phage	5.2e-47	47.4
WP_135912183.1\|2896445_2898122_-\|tail	prophage tail fiber N-terminal domain-containing protein	A0A2D1UII2	Escherichia_phage	1.0e-23	51.2
WP_095715863.1\|2898163_2901568_-	host specificity protein J	K7PKJ2	Enterobacteria_phage	0.0e+00	69.8
WP_095715864.1\|2901639_2902317_-\|tail	tail assembly protein	A0A2R9YJH6	Escherichia_phage	7.0e-72	71.1
WP_095715865.1\|2902214_2902949_-\|tail	phage tail protein	A5LH41	Enterobacteria_phage	3.8e-116	78.2
WP_095715866.1\|2902960_2903656_-\|tail	phage minor tail protein L	Q687F1	Enterobacteria_phage	4.6e-95	71.0
WP_032949490.1\|2903664_2903997_-\|tail	phage tail protein	A0A0P0ZDL9	Stx2-converting_phage	2.4e-41	67.9
WP_135912184.1\|2903997_2907300_-\|tail	phage tail tape measure protein	Q6UAW7	Klebsiella_phage	0.0e+00	66.1
WP_095715870.1\|2907550_2907913_-\|tail	phage tail protein	Q6UAW8	Klebsiella_phage	3.6e-27	56.8
WP_003832379.1\|2907975_2908458_-	hypothetical protein	Q6UAX0	Klebsiella_phage	6.1e-62	80.6
WP_032943069.1\|2908491_2908893_-	HK97 gp10 family phage protein	Q6UAX1	Klebsiella_phage	6.8e-59	88.0
WP_095715871.1\|2908889_2909279_-	hypothetical protein	Q6UAX2	Klebsiella_phage	4.3e-42	64.5
WP_003832373.1\|2909247_2909598_-\|head	phage head closure protein	Q6UAX3	Klebsiella_phage	2.4e-44	75.7
WP_095715877.1\|2909594_2909912_-\|head,tail	phage gp6-like head-tail connector protein	Q6UAX4	Klebsiella_phage	2.8e-39	79.6
WP_095715872.1\|2909892_2910264_-	hypothetical protein	Q6UAX5	Klebsiella_phage	1.2e-17	58.2
WP_095715873.1\|2910361_2911648_-\|capsid	phage major capsid protein	Q6UAX6	Klebsiella_phage	2.3e-209	87.4
WP_095715874.1\|2911722_2912643_-	S49 family peptidase	Q6UAX7	Klebsiella_phage	1.4e-131	78.8
WP_095715875.1\|2912679_2913939_-\|portal	phage portal protein	Q6UAX8	Klebsiella_phage	5.2e-222	90.2
WP_003832363.1\|2913938_2914118_-	hypothetical protein	Q6UAX9	Klebsiella_phage	3.3e-13	71.2
WP_016150031.1\|2914111_2915839_-\|terminase	terminase large subunit	Q8HAD6	Salmonella_phage	0.0e+00	92.8
WP_003832359.1\|2915835_2916333_-\|terminase	phage terminase small subunit P27 family	Q8HAD7	Salmonella_phage	1.3e-83	93.9
WP_003841965.1\|2916548_2917064_+	hypothetical protein	A0A077K9U2	Edwardsiella_phage	1.4e-32	48.2
WP_088583147.1\|2917199_2917562_-	HNH endonuclease	Q6UAS2	Klebsiella_phage	8.3e-56	86.7
WP_088583146.1\|2917836_2918376_+	cytochrome b	A0A0U2QLA7	Escherichia_phage	4.4e-45	78.1
WP_077249773.1\|2918491_2918851_+	hypothetical protein	NA	NA	NA	NA
WP_087050957.1\|2918860_2919364_-	hypothetical protein	K7P6W1	Enterobacteria_phage	9.2e-61	80.5
WP_088583145.1\|2919387_2919936_-	lysozyme	K7PM52	Enterobacteria_phage	1.0e-97	92.3
WP_003832349.1\|2919907_2920186_-\|holin	holin	K7P6H9	Enterobacteria_phage	3.9e-45	100.0
WP_003841950.1\|2920339_2920528_-	hypothetical protein	NA	NA	NA	NA
WP_170975117.1\|2920672_2921047_+	FlxA-like family protein	NA	NA	NA	NA
WP_095715878.1\|2921364_2921964_-	hypothetical protein	H9C175	Pectobacterium_phage	2.7e-83	73.9
WP_095715879.1\|2921960_2922320_-	RusA family crossover junction endodeoxyribonuclease	K7P6W0	Enterobacteria_phage	2.2e-40	61.0
WP_095715880.1\|2922312_2923806_-	DNA cytosine methyltransferase	A0A1B0V7P0	Salmonella_phage	8.0e-137	50.2
WP_095715881.1\|2923802_2924105_-	DUF968 domain-containing protein	I6XGC2	Burkholderia_virus	1.8e-27	64.0
WP_048214404.1\|2924253_2924433_-	hypothetical protein	NA	NA	NA	NA
WP_168726101.1\|2924558_2924795_-	DinI-like family protein	K7PM44	Enterobacteria_phage	2.6e-26	71.4
WP_095715883.1\|2925225_2926383_+	DUF262 domain-containing protein	A0A0R6PJX3	Moraxella_phage	2.5e-61	37.7
WP_095715884.1\|2926384_2927077_+	hypothetical protein	NA	NA	NA	NA
WP_095715892.1\|2927039_2928083_-	DNA cytosine methyltransferase	A0A0R6PG08	Moraxella_phage	5.1e-98	51.2
WP_095715885.1\|2928404_2928620_-	hypothetical protein	NA	NA	NA	NA
WP_095715886.1\|2928616_2928841_-	hypothetical protein	NA	NA	NA	NA
WP_095715887.1\|2928837_2929500_-	DUF1627 domain-containing protein	NA	NA	NA	NA
WP_168726100.1\|2929513_2930065_-	replication protein	A0A0U2JGJ0	Escherichia_phage	2.3e-41	51.3
WP_095715889.1\|2929952_2931047_-	hypothetical protein	Q8W642	Enterobacteria_phage	2.2e-19	33.3
WP_095715890.1\|2931043_2931286_-	DUF4222 domain-containing protein	NA	NA	NA	NA
WP_095715891.1\|2931298_2931775_-	hypothetical protein	NA	NA	NA	NA
WP_087051043.1\|2931774_2931987_-	transcriptional regulator	H9C161	Pectobacterium_phage	1.7e-08	45.9
WP_087051044.1\|2932065_2932482_+	helix-turn-helix domain-containing protein	K7PM82	Enterobacteria_phage	1.2e-13	54.3
WP_087051045.1\|2932731_2933073_+	hypothetical protein	G8C7T6	Escherichia_phage	5.3e-44	82.3
WP_172864452.1\|2933069_2933222_-	hypothetical protein	NA	NA	NA	NA
WP_080858660.1\|2933362_2933557_+	hypothetical protein	NA	NA	NA	NA
WP_044711810.1\|2933549_2933735_+	hypothetical protein	NA	NA	NA	NA
WP_095715893.1\|2934068_2935886_+	hypothetical protein	A0A0U2I1R6	Escherichia_phage	3.7e-11	30.0
WP_032943036.1\|2936169_2936385_+	excisionase family protein	A0A0U2RY08	Escherichia_phage	5.7e-20	56.3
WP_168726183.1\|2936384_2937671_+	DUF3596 domain-containing protein	A0A0U2JGI6	Escherichia_phage	6.1e-109	50.1

DBSCAN-SWA_6

4422232 : 4489004

Vibrio_phage(22.22%)

integrase,protease,plate,tRNA

attL 4435287:4435301|attR 4469965:4469979

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_016155510.1\|4422232_4423237_-\|protease	protease modulator HflC	NA	NA	NA	NA
WP_016151416.1\|4423239_4424493_-\|protease	FtsH protease activity modulator HflK	NA	NA	NA	NA
WP_095715634.1\|4424682_4425963_-	GTPase HflX	NA	NA	NA	NA
WP_003025584.1\|4426037_4426346_-	RNA chaperone Hfq	NA	NA	NA	NA
WP_095715633.1\|4426430_4427381_-\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA
WP_095715632.1\|4427373_4429236_-	DNA mismatch repair endonuclease MutL	A0A1B2LRQ5	Wolbachia_phage	4.0e-61	41.9
WP_065554875.1\|4429245_4430577_-	N-acetylmuramoyl-L-alanine amidase AmiB	A0A067ZJB6	Vibrio_phage	1.1e-17	30.1
WP_016151410.1\|4430593_4431055_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	NA	NA	NA	NA
WP_075207179.1\|4431026_4432574_-	bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase	NA	NA	NA	NA
WP_046275841.1\|4432572_4433712_+\|tRNA	tRNA epoxyqueuosine(34) reductase QueG	NA	NA	NA	NA
WP_016151407.1\|4434648_4435194_-	oligoribonuclease	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	1.7e-28	41.0
4435287:4435301	attL	NA	NA	NA	NA
WP_168188438.1\|4435299_4436352_+	small ribosomal subunit biogenesis GTPase RsgA	NA	NA	NA	NA
WP_016155504.1\|4436444_4437413_+	phosphatidylserine decarboxylase	NA	NA	NA	NA
WP_016151404.1\|4437430_4440745_+	miniconductance mechanosensitive channel MscM	NA	NA	NA	NA
WP_095715375.1\|4440825_4442328_-	glutamate/gamma-aminobutyrate family transporter YjeM	NA	NA	NA	NA
WP_080859581.1\|4442541_4443519_-	elongation factor P--(R)-beta-lysine ligase	A0A2K9KZX5	Tupanvirus	1.4e-28	29.1
WP_016151402.1\|4443843_4445634_+	fumarate reductase (quinol) flavoprotein subunit	NA	NA	NA	NA
WP_006686291.1\|4445626_4446361_+	fumarate reductase iron-sulfur protein	NA	NA	NA	NA
WP_016151401.1\|4446371_4446767_+	fumarate reductase subunit FrdC	NA	NA	NA	NA
WP_003025535.1\|4446777_4447134_+	fumarate reductase subunit FrdD	NA	NA	NA	NA
WP_016155499.1\|4447178_4448051_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_080859579.1\|4448182_4449328_+	CMY-2 family class C beta-lactamase	NA	NA	NA	NA
WP_016151398.1\|4449421_4449955_+	lipocalin family protein	A0A1W6JNX6	Morganella_phage	3.6e-47	54.1
WP_016151397.1\|4449951_4450269_-	quaternary ammonium compound efflux SMR transporter SugE	NA	NA	NA	NA
WP_080859577.1\|4450525_4451125_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_016151395.1\|4451155_4451302_-	lipoprotein toxin entericidin B	NA	NA	NA	NA
WP_016151394.1\|4451409_4451544_-	lipoprotein antitoxin entericidin A	NA	NA	NA	NA
WP_003025478.1\|4451601_4452168_-	elongation factor P	NA	NA	NA	NA
WP_047358982.1\|4452209_4453238_+	EF-P beta-lysylation protein EpmB	NA	NA	NA	NA
WP_080859576.1\|4453421_4454285_+	hypothetical protein	NA	NA	NA	NA
WP_080859575.1\|4454371_4454725_-	DUF4156 domain-containing protein	NA	NA	NA	NA
WP_003025464.1\|4454977_4456624_-	chaperonin GroEL	A0A2I7SAK5	Vibrio_phage	2.9e-188	68.1
WP_000027827.1\|4456667_4456961_-	co-chaperone GroES	K4F9I2	Cronobacter_phage	1.2e-12	43.3
WP_095715376.1\|4457236_4458502_+	L-methionine/branched-chain amino acid transporter	NA	NA	NA	NA
WP_016151389.1\|4458550_4459027_-	membrane protein FxsA	NA	NA	NA	NA
WP_016151388.1\|4459365_4460802_+	aspartate ammonia-lyase	NA	NA	NA	NA
WP_016151387.1\|4460917_4462219_+	anaerobic C4-dicarboxylate transporter DcuA	NA	NA	NA	NA
WP_003025447.1\|4462350_4462698_+	divalent cation tolerance protein CutA	NA	NA	NA	NA
WP_095715377.1\|4462673_4464383_+	protein-disulfide reductase DsbD	NA	NA	NA	NA
WP_016151385.1\|4464419_4464995_+	transcriptional regulator	NA	NA	NA	NA
WP_095715378.1\|4465062_4467075_+	DUF1176 domain-containing protein	NA	NA	NA	NA
WP_095715379.1\|4467463_4468726_+\|integrase	integrase arm-type DNA-binding domain-containing protein	A0A1B0VMI6	Pseudomonas_phage	4.5e-80	42.6
WP_095715986.1\|4470839_4472024_+	DUF4297 domain-containing protein	NA	NA	NA	NA
4469965:4469979	attR	NA	NA	NA	NA
WP_095715987.1\|4472020_4472500_+	hypothetical protein	NA	NA	NA	NA
WP_095715988.1\|4472496_4474248_+	hypothetical protein	NA	NA	NA	NA
WP_095715989.1\|4474725_4475019_-	PerC family transcriptional regulator	NA	NA	NA	NA
WP_168726079.1\|4475088_4475727_-	ParB N-terminal domain-containing protein	A0A0F7L444	uncultured_marine_virus	5.1e-56	52.5
WP_172864459.1\|4477096_4477741_-	hypothetical protein	NA	NA	NA	NA
WP_095715566.1\|4477934_4479383_-	AAA family ATPase	NA	NA	NA	NA
WP_168726078.1\|4479851_4481243_-	type VI secretion system ImpA family N-terminal domain-containing protein	NA	NA	NA	NA
WP_168726077.1\|4481651_4483439_-	NERD domain-containing protein	NA	NA	NA	NA
WP_095715507.1\|4483833_4485177_-	type VI secretion system ImpA family N-terminal domain-containing protein	NA	NA	NA	NA
WP_095715508.1\|4485200_4485629_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_095715509.1\|4485630_4486170_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_095715510.1\|4486185_4487277_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_095715511.1\|4487252_4489004_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP053574

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 62147

Gokushovirus(33.33%)

plate,integrase,capsid,transposase

attL 37951:37966|attR 58587:58602

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001066960.1\|1305_2046_-\|integrase	site-specific integrase	I3WFA4	Macacine_betaherpesvirus	7.0e-25	58.6
WP_079893805.1\|2410_2707_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_168726200.1\|2693_2960_-	type II toxin-antitoxin system ParD family antitoxin	NA	NA	NA	NA
WP_168726204.1\|3467_3773_-	type II toxin-antitoxin system ParD family antitoxin	NA	NA	NA	NA
WP_095715832.1\|4496_4907_+	DNA-binding protein	NA	NA	NA	NA
WP_141244114.1\|5063_5237_+	hypothetical protein	NA	NA	NA	NA
WP_095715833.1\|5289_5481_-	DUF4222 domain-containing protein	NA	NA	NA	NA
WP_095715834.1\|5987_6485_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_001559829.1\|6506_8051_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_095715835.1\|8066_9404_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_095715836.1\|9400_10054_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_095715837.1\|10056_11787_+	OmpA family protein	NA	NA	NA	NA
WP_001007315.1\|11792_12284_+	Hcp family type VI secretion system effector	NA	NA	NA	NA
WP_095715838.1\|12452_15110_+	type VI secretion system ATPase TssH	K4FB40	Cronobacter_phage	2.6e-93	32.7
WP_095715839.1\|15106_15673_+	type IV secretion protein Rhs	NA	NA	NA	NA
WP_095715840.1\|15666_16209_+	type VI secretion protein	NA	NA	NA	NA
WP_095715841.1\|16195_18718_+	type VI secretion system tip protein VgrG	NA	NA	NA	NA
WP_095715842.1\|18733_21097_+	hypothetical protein	NA	NA	NA	NA
WP_095715843.1\|21093_22089_+	SUMF1/EgtB/PvdO family nonheme iron enzyme	A0A075BSL8	Microcystis_phage	1.1e-09	29.0
WP_095715844.1\|22215_22473_+	PAAR domain-containing protein	NA	NA	NA	NA
WP_095715845.1\|22475_23666_+	hypothetical protein	NA	NA	NA	NA
WP_095715853.1\|23677_27070_+	type VI secretion protein VasK	NA	NA	NA	NA
WP_095715846.1\|27069_28668_+	type VI secretion system protein TssA	NA	NA	NA	NA
WP_095715847.1\|28801_30565_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_172864460.1\|30528_31620_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_095715849.1\|31600_32137_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_095715850.1\|32139_32571_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_095715851.1\|32727_33129_+	hypothetical protein	A0A0R6PI25	Moraxella_phage	1.5e-05	49.2
WP_095715852.1\|33284_34529_+	GIY-YIG nuclease family protein	Q9MC01	Enterobacteria_phage	3.4e-80	65.3
WP_107144921.1\|36568_36874_+	hypothetical protein	NA	NA	NA	NA
WP_168726199.1\|36928_38287_+	type VI secretion system ImpA family N-terminal domain-containing protein	NA	NA	NA	NA
37951:37966	attL	NA	NA	NA	NA
WP_095715567.1\|39394_39571_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	2.7e-20	90.7
WP_095715570.1\|39890_40211_-	PerC family transcriptional regulator	NA	NA	NA	NA
WP_168726198.1\|40289_40928_-	ParB N-terminal domain-containing protein	A0A0F7L444	uncultured_marine_virus	5.6e-55	51.5
WP_168726197.1\|40912_42145_-	DUF3440 domain-containing protein	A0A068F1U8	Mycobacterium_phage	8.8e-65	33.9
WP_095715257.1\|42297_42528_-	pilus assembly protein	NA	NA	NA	NA
WP_095715258.1\|43045_43315_+	transcriptional regulator	NA	NA	NA	NA
WP_172864461.1\|43502_44036_+	hypothetical protein	NA	NA	NA	NA
WP_095715999.1\|44144_46562_+	AF/R1 pilus outer membrane usher AfrB	NA	NA	NA	NA
WP_095715998.1\|46554_47247_+	fimbrial chaperone	NA	NA	NA	NA
WP_141244121.1\|47209_47752_+	F18 fimbrial protein FedE	NA	NA	NA	NA
WP_168726217.1\|47988_48909_+	hypothetical protein	NA	NA	NA	NA
WP_095715119.1\|49566_50172_+	hypothetical protein	NA	NA	NA	NA
WP_095715121.1\|50275_51094_+	polysaccharide deacetylase family protein	NA	NA	NA	NA
WP_095715120.1\|51105_52200_+	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_095715122.1\|53312_53546_+	DUF4222 domain-containing protein	NA	NA	NA	NA
WP_172864462.1\|54106_54199_-\|integrase	integrase	NA	NA	NA	NA
WP_095715124.1\|54803_56201_-\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_100756432.1\|56346_56466_-	nonstructural protein	NA	NA	NA	NA
WP_095715314.1\|56467_57256_-	hypothetical protein	A0A1L2BL19	Gokushovirus	1.7e-05	27.5
WP_095715315.1\|57296_58889_-\|capsid	phage capsid protein	A0A1L2BL33	Gokushovirus	5.5e-192	61.7
58587:58602	attR	NA	NA	NA	NA
WP_168726216.1\|59034_59544_-	hypothetical protein	A0A1L2BL89	Gokushovirus	4.5e-15	35.8
WP_168726215.1\|59524_59794_-	hypothetical protein	NA	NA	NA	NA
WP_172864463.1\|59780_60644_-	replication initiation protein	A0A1L2BL88	Gokushovirus	7.3e-66	50.2
WP_095715124.1\|60749_62147_-\|transposase	ISNCY family transposase	NA	NA	NA	NA

DBSCAN-SWA_2

69174 : 72306

Salmonella_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_172864464.1\|69174_69462_-	hypothetical protein	J9Q7Y9	Salmonella_phage	1.2e-09	39.5
WP_095715504.1\|69921_70407_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_095715503.1\|70394_70661_-	DUF1778 domain-containing protein	NA	NA	NA	NA
WP_095715502.1\|71748_72306_+	Ail/Lom family outer membrane beta-barrel protein	Q9EV15	Enterobacteria_phage	4.8e-26	39.1

DBSCAN-SWA_3

76320 : 104846

Sodalis_phage(33.33%)

integrase,transposase

attL 73078:73137|attR 94092:95694

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
73078:73137	attL	NA	NA	NA	NA
WP_095715991.1\|76320_77250_-\|transposase	Rpn family recombination-promoting nuclease/putative transposase	Q2A0A7	Sodalis_phage	3.0e-73	54.0
WP_168726212.1\|77552_78781_-\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	1.7e-169	95.0
WP_168726211.1\|79249_80170_-	hypothetical protein	NA	NA	NA	NA
WP_168726210.1\|80552_81530_-	hypothetical protein	NA	NA	NA	NA
WP_095715995.1\|81688_82000_-	response regulator transcription factor	NA	NA	NA	NA
WP_095715996.1\|82014_82653_-	DsbA family protein	NA	NA	NA	NA
WP_141244121.1\|82846_83389_-	F18 fimbrial protein FedE	NA	NA	NA	NA
WP_095715998.1\|83351_84044_-	fimbrial chaperone	NA	NA	NA	NA
WP_095715999.1\|84036_86454_-	AF/R1 pilus outer membrane usher AfrB	NA	NA	NA	NA
WP_168726208.1\|86562_87096_-	hypothetical protein	NA	NA	NA	NA
WP_095715258.1\|87283_87553_-	transcriptional regulator	NA	NA	NA	NA
WP_095715257.1\|88070_88301_+	pilus assembly protein	NA	NA	NA	NA
WP_095715256.1\|88768_89053_+	hypothetical protein	NA	NA	NA	NA
WP_095715255.1\|89045_89780_+	hypothetical protein	NA	NA	NA	NA
WP_168726203.1\|89776_90559_+\|integrase	tyrosine-type recombinase/integrase	I3WFA4	Macacine_betaherpesvirus	1.7e-50	90.2
WP_168726202.1\|90708_91650_-\|transposase	Rpn family recombination-promoting nuclease/putative transposase	Q2A0A7	Sodalis_phage	2.0e-72	54.7
WP_168726207.1\|91698_92271_-	DUF2913 family protein	NA	NA	NA	NA
WP_095715662.1\|94186_95359_+\|transposase	IS21 family transposase	U5N3F9	Enterobacteria_phage	3.8e-227	98.7
WP_095715663.1\|96275_97022_-	MipA/OmpV family protein	NA	NA	NA	NA
94092:95694	attR	NA	NA	NA	NA
WP_095715664.1\|97476_98298_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_141244099.1\|98411_98717_+	hypothetical protein	NA	NA	NA	NA
WP_095715665.1\|98709_99198_+	response regulator	NA	NA	NA	NA
WP_095715710.1\|99349_99736_-	hypothetical protein	NA	NA	NA	NA
WP_095715666.1\|100618_101206_-	DUF2913 family protein	NA	NA	NA	NA
WP_095715667.1\|101858_104846_-\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	3.5e-293	53.3

DBSCAN-SWA_4

135940 : 136165

Erwinia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_095715695.1\|135940_136165_-	TraR/DksA C4-type zinc finger protein	A0A218M4I6	Erwinia_phage	1.2e-07	40.8

DBSCAN-SWA_5

146956 : 169888

Escherichia_phage(14.29%)

integrase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_095715707.1\|146956_147790_-	N-6 DNA methylase	A0A2K9V411	Faecalibacterium_phage	5.8e-20	33.7
WP_095715708.1\|147838_147985_-	succinate dehydrogenase flavoprotein subunit	NA	NA	NA	NA
WP_095715709.1\|148078_148423_-	hypothetical protein	NA	NA	NA	NA
WP_172864465.1\|148487_148871_-	ammonia monooxygenase	NA	NA	NA	NA
WP_095715336.1\|149709_150081_+	DUF305 domain-containing protein	A0A218MND9	uncultured_virus	1.7e-19	58.2
WP_095715337.1\|150220_150943_-	plasmid SOS inhibition protein A	NA	NA	NA	NA
WP_095715338.1\|150939_151374_-	conjugation system SOS inhibitor PsiB	NA	NA	NA	NA
WP_095715339.1\|151418_153398_-	ParB/RepB/Spo0J family partition protein	G8DH78	Emiliania_huxleyi_virus	1.1e-29	29.8
WP_095715340.1\|153468_153708_-	DUF905 domain-containing protein	NA	NA	NA	NA
WP_172864466.1\|154414_154669_-	DNA polymerase III subunit theta	Q71T70	Escherichia_phage	3.8e-15	57.1
WP_008455403.1\|154855_155047_-	hypothetical protein	NA	NA	NA	NA
WP_095715532.1\|155089_155596_-	antirestriction protein ArdA	A0A1I9S7Y0	Rhodococcus_phage	1.7e-09	29.2
WP_095715531.1\|156000_156411_-	DUF1380 domain-containing protein	NA	NA	NA	NA
WP_095715530.1\|156459_156885_-	antirestriction protein	A0A1S5R3R9	Pseudomonas_phage	7.1e-06	28.1
WP_095715529.1\|157299_158082_-	hypothetical protein	NA	NA	NA	NA
WP_095715528.1\|158135_158555_-	DUF1380 domain-containing protein	NA	NA	NA	NA
WP_095715527.1\|158566_158788_-	hypothetical protein	NA	NA	NA	NA
WP_095715526.1\|158787_159471_-	DNA methylase	A0A2I7RE86	Vibrio_phage	1.3e-28	36.4
WP_095715524.1\|159993_160854_-	RepB family plasmid replication initiator protein	Q71TL8	Escherichia_phage	1.4e-133	82.8
WP_095715523.1\|161237_161660_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	4.4e-32	55.6
WP_095715522.1\|161659_162931_+	Y-family DNA polymerase	F1C5A5	Cronobacter_phage	3.3e-155	63.3
WP_095715521.1\|163077_164049_-	ParB/RepB/Spo0J family partition protein	Q1MVJ4	Enterobacteria_phage	8.7e-116	69.8
WP_095715520.1\|164045_165251_-	AAA family ATPase	Q1MVJ3	Enterobacteria_phage	7.8e-207	90.7
WP_168726205.1\|165973_166144_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_095715194.1\|166343_166595_+	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA
WP_095715193.1\|166591_166879_+	type II toxin-antitoxin system RelE/ParE family toxin	A0A2H4JBF4	uncultured_Caudovirales_phage	9.9e-20	47.4
WP_141244065.1\|166884_167250_+	hypothetical protein	NA	NA	NA	NA
WP_095715192.1\|167246_167555_+	hypothetical protein	NA	NA	NA	NA
WP_095715191.1\|167705_167936_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_095715190.1\|167932_168349_+	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_095715189.1\|168381_169125_+	hypothetical protein	NA	NA	NA	NA
WP_095715188.1\|169360_169888_-	GNAT family N-acetyltransferase	A0A0M3ULL7	Bacillus_phage	5.2e-06	26.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP053573

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP053574

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection