CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP051204	Chitinophaga sp. 1303 chromosome, complete genome	10 crisprs	csa3,WYL,RT,DEDDh,cas3,cas6,PD-DExK	1	3	3	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP051204_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP051204_1

559792-559879

Orphan

Consensus_repeat	Method
ACAGCTCCAATCAAAAAATTCACAAATCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP051204_1

>merge|NZ_CP051204|1|559792-559879|CRISPRCasFinder
ACAGCTCCAATCAAAAAATTCACAAATCAGAAAATCCGTAAATCTTTTTTGATCTCGTGACAGCTCCAATCAAAAAATTCACTAATCA

>NZ_CP051204|1|1|559792-559879|CRISPRCasFinder
ACAGCTCCAATCAAAAAATTCACAAATCA	GAAAATCCGTAAATCTTTTTTGATCTCGTG
ACAGCTCCAATCAAAAAATTCACTAATCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP051204.1\|WP_168802545.1\|551787_553056_-\|aspartate-kinase	unknown	unknown	gnl\|CDD\|239776
NZ_CP051204.1\|WP_168802546.1\|553199_554210_+\|class-1-fructose-bisphosphatase	unknown	unknown	gnl\|CDD\|236458
NZ_CP051204.1\|WP_168811576.1\|556369_556930_+\|NUDIX-hydrolase	unknown	unknown	gnl\|CDD\|239516
NZ_CP051204.1\|WP_168802554.1\|564572_565160_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051204.1\|WP_168802548.1\|555835_556363_+\|putative-metal-dependent-hydrolase	unknown	unknown	gnl\|CDD\|183954
NZ_CP051204.1\|WP_168802552.1\|562245_563175_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NZ_CP051204.1\|WP_168802543.1\|548604_551043_-\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|379720
NZ_CP051204.1\|WP_168802556.1\|566445_566844_+\|cytochrome-c-maturation-protein-CcmE	unknown	unknown	gnl\|CDD\|376989
NZ_CP051204.1\|WP_168859803.1\|569586_570588_+\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|224561
NZ_CP051204.1\|WP_168802547.1\|555059_555824_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP051204.1\|WP_168802553.1\|563171_564467_-\|radical-SAM-protein	unknown	unknown	gnl\|CDD\|100105
NZ_CP051204.1\|WP_168802555.1\|565163_566207_-\|agmatinase-family-protein	unknown	unknown	gnl\|CDD\|212539
NZ_CP051204.1\|WP_168859801.1\|558229_559678_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051204.1\|WP_168859802.1\|566952_569481_+\|cytochrome-c-biogenesis-protein-CcsA	unknown	unknown	gnl\|CDD\|224061
NZ_CP051204.1\|WP_168811575.1\|554409_554853_+\|CAP-domain-containing-protein	unknown	unknown	gnl\|CDD\|349398
NZ_CP051204.1\|WP_168802544.1\|551105_551384_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051204.1\|WP_168802549.1\|556930_558220_-\|bifunctional-folylpolyglutamate-synthase/dihydrofolate-synthase	unknown	unknown	gnl\|CDD\|273659
NZ_CP051204.1\|WP_168802551.1\|559913_560807_-\|energy-transducer-TonB	unknown	unknown	gnl\|CDD\|223880
NZ_CP051204.1\|WP_168802559.1\|570679_571309_+\|DUF4294-domain-containing-protein	unknown	unknown	gnl\|CDD\|379485
NZ_CP051204.1\|WP_168862343.1\|560953_562177_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340887

Protein	Function_ID	Function_description	E-value
NZ_CP051204.1\|WP_168802545.1\|551787_553056_-\|aspartate-kinase	gnl\|CDD\|239776	cd04243, AAK_AK-HSDH-like, AAK_AK-HSDH-like: Amino Acid Kinase Superfamily (AAK), AK-HSDH-like; this family includes the N-terminal catalytic domain of aspartokinase (AK) of the bifunctional enzyme AK- homoserine dehydrogenase (HSDH). These aspartokinases are found in such bacteria as E. coli (AKI-HSDHI, ThrA and AKII-HSDHII, MetL) and in higher plants (Z. mays AK-HSDH). AK and HSDH are the first and third enzymes in the biosynthetic pathway of the aspartate family of amino acids. AK catalyzes the phosphorylation of Asp to P-aspartyl phosphate. HSDH catalyzes the NADPH-dependent conversion of Asp 3-semialdehyde to homoserine. ThrA and MetL are involved in threonine and methionine biosynthesis, respectively. In E. coli, ThrA is subject to allosteric regulation by the end product L-threonine and the native enzyme is reported to be tetrameric. As with bacteria, plant AK and HSDH are feedback inhibited by pathway end products. Maize AK-HSDH is a Thr-sensitive 180-kD enzyme. Arabidopsis AK-HSDH is an alanine-activated, threonine-sensitive enzyme whose ACT domains, located C-terminal to the AK catalytic domain, were shown to be involved in allosteric activation. Also included in this CD is the catalytic domain of the aspartokinase (AK) of the lysine-sensitive aspartokinase isoenzyme AKIII, a monofunctional class enzyme (LysC) found in some bacteria such as E. coli. In E. coli, LysC is reported to be a homodimer of 50 kD subunits. Also included in this CD is the catalytic domain of aspartokinase (AK) of the bifunctional enzyme AK - DAP decarboxylase (DapDC) found in some bacteria. DapDC, which is the lysA gene product, catalyzes the decarboxylation of DAP to lysine.	9.08464e-99
NZ_CP051204.1\|WP_168802546.1\|553199_554210_+\|class-1-fructose-bisphosphatase	gnl\|CDD\|236458	PRK09293, PRK09293, class 1 fructose-bisphosphatase.	5.24632e-157
NZ_CP051204.1\|WP_168811576.1\|556369_556930_+\|NUDIX-hydrolase	gnl\|CDD\|239516	cd03424, ADPRase_NUDT5, ADP-ribose pyrophosphatase (ADPRase) catalyzes the hydrolysis of ADP-ribose and a variety of additional ADP-sugar conjugates to AMP and ribose-5-phosphate. Like other members of the Nudix hydrolase superfamily, it requires a divalent cation, such as Mg2+, for its activity. It also contains a highly conserved 23-residue Nudix motif (GX5EX7REUXEEXGU, where U = I, L or V) which functions as a metal binding site/catalytic site. In addition to the Nudix motif, there are additional conserved amino acid residues, distal from the signature sequence, that correlate with substrate specificity. In humans, there are four distinct ADPRase activities, three putative cytosolic enzymes (ADPRase-I, -II, and -Mn) and a single mitochondrial enzyme (ADPRase-m). Human ADPRase-II is also referred to as NUDT5. It lacks the N-terminal target sequence unique to mitochondrial ADPRase. The different cytosolic types are distinguished by their specificities for substrate and specific requirement for metal ions. NUDT5 forms a homodimer.	1.57986e-43
NZ_CP051204.1\|WP_168802548.1\|555835_556363_+\|putative-metal-dependent-hydrolase	gnl\|CDD\|183954	PRK13291, PRK13291, putative metal-dependent hydrolase.	5.5023e-77
NZ_CP051204.1\|WP_168802552.1\|562245_563175_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	1.48022e-23
NZ_CP051204.1\|WP_168802543.1\|548604_551043_-\|TonB-dependent-receptor	gnl\|CDD\|379720	pfam14905, OMP_b-brl_3, Outer membrane protein beta-barrel family. This family includes proteins annotated as TonB dependent receptors. But it is also likely to contain other membrane beta barrel proteins of other functions.	3.36857e-107
NZ_CP051204.1\|WP_168802556.1\|566445_566844_+\|cytochrome-c-maturation-protein-CcmE	gnl\|CDD\|376989	pfam03100, CcmE, CcmE. CcmE is the product of one of a cluster of Ccm genes that are necessary for cytochrome c biosynthesis in eubacteria. Expression of these proteins is induced when the organisms are grown under anaerobic conditions with nitrate or nitrite as the final electron acceptor.	1.1618e-14
NZ_CP051204.1\|WP_168859803.1\|569586_570588_+\|alpha/beta-fold-hydrolase	gnl\|CDD\|224561	COG1647, COG1647, Esterase/lipase [General function prediction only].	1.42849e-13
NZ_CP051204.1\|WP_168802547.1\|555059_555824_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	1.68271e-85
NZ_CP051204.1\|WP_168802553.1\|563171_564467_-\|radical-SAM-protein	gnl\|CDD\|100105	cd01335, Radical_SAM, Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster. Mechanistically, they share the transfer of a single electron from the iron-sulfur cluster to SAM, which leads to its reductive cleavage to methionine and a 5'-deoxyadenosyl radical, which, in turn, abstracts a hydrogen from the appropriately positioned carbon atom. Depending on the enzyme, SAM is consumed during this process or it is restored and reused. Radical SAM enzymes catalyze steps in metabolism, DNA repair, the biosynthesis of vitamins and coenzymes, and the biosynthesis of many antibiotics. Examples are biotin synthase (BioB), lipoyl synthase (LipA), pyruvate formate-lyase (PFL), coproporphyrinogen oxidase (HemN), lysine 2,3-aminomutase (LAM), anaerobic ribonucleotide reductase (ARR), and MoaA, an enzyme of the biosynthesis of molybdopterin.	8.5519e-17
NZ_CP051204.1\|WP_168802555.1\|565163_566207_-\|agmatinase-family-protein	gnl\|CDD\|212539	cd11593, Agmatinase-like_2, Agmatinase and related proteins. This family includes known and predicted bacterial and archaeal agmatinase (agmatine ureohydrolase; AUH; SpeB; EC=3.5.3.11), a binuclear manganese metalloenzyme that belongs to the ureohydrolase superfamily. It is a key enzyme in the synthesis of polyamine putrescine; it catalyzes hydrolysis of agmatine to yield urea and putrescine, the precursor for biosynthesis of higher polyamines, spermidine, and spermine. As compared to E. coli where two paths to putrescine exist, via decarboxylation of an amino acid, ornithine or arginine, a single path is found in Bacillus subtilis, where polyamine synthesis starts with agmatine; the speE and speB encode spermidine synthase and agmatinase, respectively. The level of agmatinase synthesis is very low, allowing strict control on the synthesis of putrescine and therefore, of all polyamines, consistent with polyamine levels in the cell. This subfamily belongs to the ureohydrolase superfamily, which includes arginase, agmatinase, proclavaminate amidinohydrolase, and formiminoglutamase.	3.3719e-99
NZ_CP051204.1\|WP_168802559.1\|570679_571309_+\|DUF4294-domain-containing-protein	gnl\|CDD\|379485	pfam14127, DUF4294, Domain of unknown function (DUF4294). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 192 and 226 amino acids in length.	5.50003e-62
NZ_CP051204.1\|WP_168859802.1\|566952_569481_+\|cytochrome-c-biogenesis-protein-CcsA	gnl\|CDD\|224061	COG1138, CcmF, Cytochrome c biogenesis factor [Posttranslational modification, protein turnover, chaperones].	1.19106e-69
NZ_CP051204.1\|WP_168811575.1\|554409_554853_+\|CAP-domain-containing-protein	gnl\|CDD\|349398	cd05379, CAP_bacterial, Bacterial CAP (cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins) domain proteins. Little is known about bacterial and archaeal members of the CAP (cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins) domain family. The wider family of CAP domain containing proteins includes plant pathogenesis-related protein 1 (PR-1), cysteine-rich secretory proteins (CRISPs), and allergen 5 from vespid venom, among others. Studies of eukaryotic proteins show that CAP domains have several functions, including the binding of cholesterol, lipids and heparan sulfate. This group includes Borrelia burgdorferi outer surface protein BB0689, which does not bind to cholesterol, lipids, or heparan sulfate, and whose function is unknown.	7.59587e-37
NZ_CP051204.1\|WP_168802549.1\|556930_558220_-\|bifunctional-folylpolyglutamate-synthase/dihydrofolate-synthase	gnl\|CDD\|273659	TIGR01499, Folylpolyglutamate_synthase, folylpolyglutamate synthase/dihydrofolate synthase. This model represents the FolC family of folate pathway proteins. Most examples are bifunctional, active as both folylpolyglutamate synthetase (EC 6.3.2.17) and dihydrofolate synthetase (EC 6.3.2.12). The two activities are similar - ATP + glutamate + dihydropteroate or tetrahydrofolyl-[Glu](n) = ADP + orthophosphate + dihydrofolate or tetrahydrofolyl-[Glu](n+1). A mutation study of the FolC gene of E. coli suggests that both activities belong to the same active site. Because some examples are monofunctional (and these cannot be separated phylogenetically), the model is treated as subfamily, not equivalog. [Biosynthesis of cofactors, prosthetic groups, and carriers, Folic acid].	1.83265e-126
NZ_CP051204.1\|WP_168802551.1\|559913_560807_-\|energy-transducer-TonB	gnl\|CDD\|223880	COG0810, TonB, Periplasmic protein TonB, links inner and outer membranes [Cell envelope biogenesis, outer membrane].	6.5767e-07
NZ_CP051204.1\|WP_168862343.1\|560953_562177_+\|MFS-transporter	gnl\|CDD\|340887	cd17329, MFS_MdtH_MDR_like, Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This family is composed of Escherichia coli MdtH and similar multidrug resistance (MDR) transporters from bacteria and archaea, many of which remain uncharacterized. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtH confers resistance to norfloxacin and enoxacin. MdtH-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	7.5465e-56

>NZ_CP051204.1|WP_168859801.1|558229_559678_-|hypothetical-protein
MRMHRILFSTVLFLWPAYAAVAQTFPGYNTSNYAGIHGVISNPASAAGYRYKWDVNIIGADVKGGNTYMKVPKSILFNPPPRNKWVRNQDYFLDTAANRRQNGWGMAEIVMPSVLYAIDEKQSVSFIWRVRASASGGNLPTPLANFFGNDYPNIQYRGKNLNIEKVGVGAHIWNELGFSYARTIHEGYTSRWKAGVTVKLLSGIAAGYAQVANASFVLNDRRNGDITSGTLRYAYSEELDHWQKPYTRNLQLFHNNGAGFDLGVIYEYRPDNGGFGQFEGTDADEYKFRLGLSLNDIGRIKYRKGANNTDLDLRKQDINPNEITYKDNESLKQYSTRLNRYFTPIPGDDSSFVMALPASLQLMGDYNINGRFFVSANAIIALNAGKNGLARTYAMTQVLITPRYETELFGAYMPFVVNHNGQADVGAGFRIGPLVLGSYSLFTTLFQHRINHTDAFVALRINPGMLGKGNKNKGQLGCPVNF
>NZ_CP051204.1|WP_168802549.1|556930_558220_-|bifunctional-folylpolyglutamate-synthase/dihydrofolate-synthase
MNAYQEALDYLYGQLPMFTKVGASAYKTDLHNTVALLQQLNHPQHTFKTIHVAGTNGKGSTSHMLAAILQQAGYKTGLYTSPHLLDFRERIRINGQVAPEDFVVNFTNNMRPFIESISPSFFELTVAMAFQYFAQEKVDIAVIEVGLGGRLDSTNVITPELSVITNISFDHKNILGDTLPLIASEKAGIIKPGVPVVISETQSEIQWVFREKAAETGSPVHFADQEWMVDGSIIKDNHLELTLLDTRKGAMHHIRLDLSGQYQEKNVMGVLSAVKVLQQQGWHITWDHVLAALSHVRKLTGLRGRWEVVGEKPLTVMDVGHNEAGIREVVQQLEHVNYQQLHIVTGFVKDKEVDNVLPLFPATAIYYFCRAQIPRALDEVALAEMAARHGLQGRPYESVQAALQAARQHARPEDMILVCGSFFIVAEAM
>NZ_CP051204.1|WP_168811576.1|556369_556930_+|NUDIX-hydrolase
MMNMDWKLLSSEYLFKDDWLTARKDKCITPQGTIVEPYYVLEYNDWVNAVALTEDGQVIMIRQYRQGIGQTLLEIPGGTMDATDPSPEFAMERELLEETGYEFSELISLGKVAANTASSNNYTHMFLATGGRKVKEQQLDHNEEIEVVLMSVPEVQQLILDNKIVHSLHVTGLCYALMHMGRMEMK
>NZ_CP051204.1|WP_168802548.1|555835_556363_+|putative-metal-dependent-hydrolase
MEALQYPIGRFEPLPDYSPAMLREYINDIRDLPTLVEMAVQNLDAFQLQKPYRPGGWNITQVVHHLADSHINAITRMKMALTEEKPIIKPYDEAAWAELEDVKNTPINVSITLLHALHTRWANLMERLTPEQWERSFIHPEHGRRFNMKTVAANYAWHGKHHLGHIQGLKERMNW
>NZ_CP051204.1|WP_168802547.1|555059_555824_+|ABC-transporter-ATP-binding-protein
MEKNKIIEVRNLVKKYGEFTAVKGISFDVYEHEIFGLLGPNGAGKSTTLEIIETLREKTEGQVTVGGFDLDTAPNDIKKIIGVQLQSSGYYPGLNLVELIEMFGGLYNQPVQPIELLRLFNLEDKAKAKYKELSGGQKQRFSIATTLINKPRIIFLDEPTTGLDPQARRNLWDLILQVRAQGTTVVITTHYMDEAEFLCDRCAIVDSGQVIAIDSPDALIDNLVSKGFERSKEVKKANLEDVFIHLTGKDLRES
>NZ_CP051204.1|WP_168811575.1|554409_554853_+|CAP-domain-containing-protein
MFAAFQVSACSRATSRADSTATGGSLDEQILYYTNKFRQSKGLKPLQLDETISQQARRHSRDMANGSTGFGHEGFEDRVAYITKKMGRVGAAAENVAYGTLDAQAVVDGWIKSPGHRRNMLGDYNMIGIGTAGKGRITFFTQVFIKH
>NZ_CP051204.1|WP_168802546.1|553199_554210_+|class-1-fructose-bisphosphatase
MNHKQKVMTLDEFTIQELRNYPGATGQLSGLLRDIGLAAKRVNVEVNKAGIADILGEAGKTNVQGESVKKLDEFANEQFINSLRTSIYCCGVASEEEEHFIAFNDEHSKKSKYVVLLDPLDGSSNIDVNVSIGTIFSVYRRLSAEGEECNLEDFLQPGTQQIAAGYIIYGSSTMMVYATRRSVQGFTLDPSIGEFCLSHPNLKCPPESDIFSVNVGYYHLYEDKVRQSIDHFMARNENDRIYRHRFVGCMVAEIHRTLIQGGIFMYPAFGKYKSGRLRLCYECNPMSFLMEKAGGMSMANSRQRLLELKPVQLHQRVPIFIGSKNMMETWKDIMNK
>NZ_CP051204.1|WP_168802545.1|551787_553056_-|aspartate-kinase
MKVFKFGGASLESVERIKQVAQIVQSFPDDKLLIVISAMGKTTNELEKVAQNFYMRKREIAAQLLYNVEQQHIQVAESLLGNREHPLFQQLQQFFTEAEWTLGEKPLRAYDYYYDQLVSMGELLSTAIVSAFFNTIGLSNTWVDVRDVFRTDDNFRDANIDWAFTQKQVTEKVVPLFNQTNIVIAQGFIGSTDQNESVTLGREGSDYSAAVFANMLDAESQTIWKDVEGLKNADPKLFPNTVNIPEISYGEVIEMAYYGAQVIHPKTIKPLQNKQIPLLVKCFLDKNLPGTVIREQADVRQLPPIIVLKRNQVLLTLTSKDYAFITEDKISDIYETFHRLKVKINLMQNGAITFSCCIDHNPEKIELLIKALHNDFKISYNEALELLTVRYYQDGLLEDLSNHHTVLLEQRSKVTVQRLLKK
>NZ_CP051204.1|WP_168802544.1|551105_551384_-|hypothetical-protein
MKKAALLLIVTSCIALVLASKGLLKDMAPMQSSSPDILPLFVITDANWPGALPTRQADADVNPDNAQLRPKPIQDAVKTIVDIYHSQNQIRQ
>NZ_CP051204.1|WP_168802543.1|548604_551043_-|TonB-dependent-receptor
MKKFIIVLGILMSAVMYAFAQKNPTGTISFKITDAAGKPLPFASVLLRKTQDSAQVKGEMSSESGEGRFEKIAFGQYFLQVSQMGFTTQYAANFTIDASHTNIAVPAIALQPLSKSLQTVNVTATRPFIEKSAGKTVLNVESSVTAVGNSALDILKRAPGVQIDNNENVKMKGQTVTVMIDGKLTYLSGEDLTNLLKNTPGESISQIEILTSPSAKYDASGNGGIINIKTKKGKLTGINGTVNATLSQSRYGTYSANGTFNWRTTKFNLFGDLGRTDRPFQITRKYSRAFNDKGVVTEQTQDIFQRNRFQRNAAKIGFDYFLNDKHTVGFIVNGFKNRFSNQIYSNTYFMNKPGAPADSLVNSYTTNNNRFNNIAINLNYKAVLDTAGREYSVDADYARFNSERALVLNDSMLDVKSQRVRNPNGIRNQGGTQITIKSLKGDFAWPLGKNGKVEAGVKASLVTTANRLAYDSLKNGEYIFAPSQSNEFKYQEDVYAAYASYKKQLTPKTGIQAGLRVENTQSDGYSVTLKSQVKRHYTDFFPNLTIDQKLNDNNKISLAYSRRIERPEYGQLNPFMFYLDRYTFFRGNPYLQPQYTNNVELAYTFKDKYIATLGYNRTTDVINEFLYQDDSAKTSTSTLMNYKKSHVYSLAVTLPFQVTKWWMSDNNLNAAYNDYYFTNNKNQPEMTSSFTYSFNSTNTITLPKDFKLEVAGYYNSPFVYAIFKGYNEYNLNLGIQKTFWDKKATIKFNYNNILRNESYRGIAQYSNLALHIFNTWQFRTASIYFSYRFGNSSIKAARERKTGTSDEQKRAG
>NZ_CP051204.1|WP_168802551.1|559913_560807_-|energy-transducer-TonB
MEENNRKKNIQALGVTIGVHALLLVALVFAGFSAPPPLPDQDLGMEVNLGTSDDGMGDEQPLNPNPPSAAASTPAPAESEPAATEKDNSAPQEVATQEDEEAPEIKKPEKPVEKPKELPKKLEPKPVAKPVKKPAAEPKPTPPAPKPQPKAVYSGGSSTNANSGNGAQGSNNSTGEGNTGKPGDRGQLNGDPNAKGYTGGGLGGGRSDFRLNGRNLISRPSVTYDGTESGYIAVNIKVDQKGNVIAATFSMKGSTLSNPQLIDIARKAALNGQLKYNANPDAPEVQFGTIRFYFKAE
>NZ_CP051204.1|WP_168862343.1|560953_562177_+|MFS-transporter
MLKQTIRLYQNAYTGLSAATWWLSLVLLINRSGAMVVPFLTVYLTAHLHFSIAQAGLVMACFGTGAIVGALLGGWLSDRIGFYQVQFWSLLFNGVLLILLGQMRTFPQICICVFVLSSVGDAFRPANSIAIAAYSAPQNRTRSYSLNRLAVNLGWSVGPALGGFLASISYQWLFWVDGGTCIVAALLMRIFLPPVPAPAKPEKAVATGQTENVWKDSLYLWFLLFGMINAICLFQFSSMVPLYFKEVVQMKEWAIGLNMSLNGLLIVMVEMVMIHHLDGKLPNLVYVSRGAMMVCLAYVLLCVLPPVWGIAAVFMIVVTFGEMLCLPFMNSFWISRSQDHNRGQYAALYTISYSLATVVSPTSGAFVVQHLGFTSWWAITAGGCVLSAAGFRWLQQKRARAEKVIAA
>NZ_CP051204.1|WP_168802552.1|562245_563175_+|AraC-family-transcriptional-regulator
MKVIQFTVPVAEEGSVVIQEDILPYFYNYLHRHKEAQLTLIIKGEGTLIAGSYTQPFKAGDIYVIGANQPHMFKGDARYFENLKEKNIHAIHIFFDHDNALKGMLALPELESVRKFLQQTRSSLQLPPAYEEKTAAEIMRLCKLTGAERLFAFMSLLTYFSRQVKDWKSLSTGFLRHAYSESEGLRMNDIYQYTLEHYAENISLARIASVAHLTTYAFCKYFKKHTRKTYLEFLNEIRINAACKKIINGDAESIASVAYATGYNNPITFNRVFRKVTGMSPSAYARQYRFGQENAQRSGFISEWEEVAL
>NZ_CP051204.1|WP_168802553.1|563171_564467_-|radical-SAM-protein
MLKQTPYILYSDGKGNIFEDTSMQVVGRSGWDAFPIDPEEWIELPEGGNLYELPGRRGIGIDVASGEMGLCDKGWAVAAFIPPAHTGFYLAAYETMPDAPTLPLFCYTAVGWLDGKFYVPATRIEADIRQECAGFDAKKVKQGVKQLMDAYPHNRLVKHLAENCALTYECPAARNYFMGRWECPIPSSPACNANCVGCISFQPEDETIVSTQDRLRFKPTAEEIVEYTVPHLETAPFPIVSFGQGCEGEPLLMWETIRESILEIRKHTPKGSININTNGSKPDAVRALCEAGLNSIRVSLNSAQEKYYTPYYRPNNYKFEDIIESLKVVREFNGWTSINYFVFPGMTDTEEEYEALRTLIRETGLNMIQWRNFNIDPDWYLGKLGITEPGPCMGIKQLQEMIHEEFPDVKFGYFNPPIERIKGDYMADFAH
>NZ_CP051204.1|WP_168802554.1|564572_565160_-|hypothetical-protein
MYSLRILHPNTASRLRLLPVMHGLVGILFLFDAIGIYKGPQPNWLLVGFFMVVGLVSLAFPFVVKRTRKFSEINSIARLIQAFICISGSLYFLGHQQPVTGLLMFAVGVGMAYIGWMEYKIFQPVHVKMDNTGIVLPTTFSERRIGWNELNNVILRNDLFTMDFKSNKIIQLEVLDEPGQEQREKMNGFFRERLG
>NZ_CP051204.1|WP_168802555.1|565163_566207_-|agmatinase-family-protein
MADLSQFDPNSVGLLSNNIFGLPFSEEEARLVLLPVPWEVTVSYSNGTARGPEHIFRASFQVDLYDADVKDGWKQGFFMREPDKHLLLRSDYLRKEAELYLKFLTEGGDISENEFLKKTLVDVNNGTRAMNEWVYNQTKQLLEKGKLVALIGGDHSTPLGFFKAIGEQKGDFGILQIDAHCDLRDAYEGFQYSHASIMYNALAEVPQLTKLVQVGIRDYCEEEVDYINNSNGRVVTFFDKNIKERQFEGETWKAICDSIIETLPQQVYISFDIDGLDPKLCPHTGTPVAGGFEAEQIYYLFKRLIASGRQLIGFDLNEVSASHDDWDANVGARVLFKLCNLLVSANS
>NZ_CP051204.1|WP_168802556.1|566445_566844_+|cytochrome-c-maturation-protein-CcmE
MKKTNIILLVVIAVAIGVIVTMVGDFSTYETFATAREKEGKEFHVIGKLDTLQAMQYDPLKDANLFSFYVHDKSGETRKVVFYGAKPTDFEKAESVVLTGKMQGNEFHCSKILMKCPSKYKDDQVVVGNKQL
>NZ_CP051204.1|WP_168859802.1|566952_569481_+|cytochrome-c-biogenesis-protein-CcsA
MKFEGEHLLPGQLGHFFAILAFVASLVATISYYNAVKVKEPLVRDSWKKLARWSFVIQSASVIAVFSCLFFILNNHYFEYKYAWRNTSRDLPTQYLFSSLWSDQEGSFLLWSIWNSVLGIILIRTSKNLEAPVMTVFSLAQVIFASMLLGIFILGYKVGSNPFMLLRQAPENQAAPIFQQADYMQHIHDGNGLNVTLQNYWMVIHPPILFLGFASMIIPFAFAFAGLWTRDYTGWVKPVLPWTLFAVALLGTGIMMGAAWAYESLNFGGYWGWDPVENASLVPWLTMVAGLHTLLAYKHTGHALKSTVFFFFISYVLILYSSFLTKSGVLGDTSVHSFTDMGMTAQLLFTIFVFTVPSIFLLIARRKEIPGNNKEESTYSREFWLFVGSLILLIAAIQITFTTSIPVWNQLLAFTGLKGLFKMDDIAPPSDVMFHYNKIQIWIAIVLGVLTAVVQFLKYKDTPKGFFTRKIWLPTALAVLFTALIAWKGPITYDNYGAGFLTAIYIMLFTSIYAIVGNFTYIFSGLKGKLKNAGASVAHIGFGMVLLGALISSSKMEVISIDRMKMLNDGFFRKESKQNPRENIMLPKDVQVQMGDYHVTYVGDSTAQGDPKTYYVMHYERKDKTTGEVKERFTLYPDAFVNRKENALSSNPASKHYLTRDIFTYVSAAPNKAEAAAADTTAYTAHEVKVGDSIFFSKGFMVLKGLEPAPKNKNYIAEPNDLAVGAKLEVHTQTDDHFNLQPIYFIRDSSYQYSVEDTLAPLNLNVRFTKIMPAENKIELKVKEAAGFSDYVVMKALVFPYINVLWLGVIITIVGTGMSIVQRTRRTEKNAKAGTKKTPVNI
>NZ_CP051204.1|WP_168859803.1|569586_570588_+|alpha/beta-fold-hydrolase
MKRSLRIFLVLIAVLAVVFLVGPHPASPVYSLTLPVVPSDGRALERYIHDREARHRLKPDNEARIIWADSLAQPTPYAVVYLHGFSASQEEGDPIHHDFARRYGCNLYLSRLDGHGIDTTEPLLTMTADGLWEDAKEALQIGKALGRKVILIGTSTGGTLALKLAATYPQDVYAVINMSPNIAINDDLAFLANDPWGLQLARLVKGGKYKESSDTNAVRAQYWNNKYRLEAVVQLQNLLETSMTPATFGKIKQPVLNLYYYKDELHQDPTVRVSAILKMEQELGTPGNLKAAVPIPGAGAHVMGSRLTGHDLPAVANAINQFADSVLRLKPVR
>NZ_CP051204.1|WP_168802559.1|570679_571309_+|DUF4294-domain-containing-protein
MHCRRKIILSAILITGISLCRQEASAQSQAPHGVDTVALHAVVVGNDTIPVITLAIFDVVDKMPRALRKEKERYNRLRNAVYVTYPYARTAARLLKDVNSRLSAMSSKKERKAFLASKEKEMKEQFGDKLQNLSVYQGKVLMKLIDRETGQNCYEIIKELKGGFNARVWQTVAFFFGGNLKSDYDKQEDRDIEVIVQELEMYQRYRAYN

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Crispr_ID: NZ_CP051204_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP051204_2

1888796-1888897

Orphan

Consensus_repeat	Method
CGGTTCTTTGCGTTCTTACCAAAAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP051204_2

>merge|NZ_CP051204|2|1888796-1888897|CRISPRCasFinder
CGGTTCTTTGCGTTCTTACCAAAAAACACAGGTCTTATATTCCTCTTTGCGGGAAAATGATCTCAATGGTAACCTTCGGTTCTTTGCGTTCTTGCCAAAAAA

>NZ_CP051204|2|2|1888796-1888897|CRISPRCasFinder
CGGTTCTTTGCGTTCTTACCAAAAAA	CACAGGTCTTATATTCCTCTTTGCGGGAAAATGATCTCAATGGTAACCTT
CGGTTCTTTGCGTTCTTGCCAAAAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP051204.1\|WP_168803540.1\|1883525_1885307_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|131259
NZ_CP051204.1\|WP_168803541.1\|1886028_1888524_-\|outer-membrane-beta-barrel-protein	unknown	unknown	gnl\|CDD\|379720
NZ_CP051204.1\|WP_168803545.1\|1893121_1893670_-\|putative-glycolipid-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|377662
NZ_CP051204.1\|WP_168803533.1\|1877489_1878473_-\|phosphotransferase	unknown	unknown	gnl\|CDD\|270702
NZ_CP051204.1\|WP_168803549.1\|1898086_1898950_+\|metalloprotease	unknown	unknown	gnl\|CDD\|225203
NZ_CP051204.1\|WP_168803532.1\|1877027_1877489_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051204.1\|WP_168860299.1\|1896126_1896927_-\|formate-dehydrogenase-accessory-sulfurtransferase-FdhD	unknown	unknown	gnl\|CDD\|234823
NZ_CP051204.1\|WP_078672524.1\|1889791_1889953_-\|DUF1328-domain-containing-protein	unknown	unknown	gnl\|CDD\|227774
NZ_CP051204.1\|WP_168803542.1\|1888997_1889756_+\|DUF695-domain-containing-protein	unknown	unknown	gnl\|CDD\|368292
NZ_CP051204.1\|WP_168803537.1\|1882123_1882789_-\|MgtC/SapB-family-protein	unknown	unknown	gnl\|CDD\|376760
NZ_CP051204.1\|WP_168803544.1\|1892051_1893125_+\|nitronate-monooxygenase	unknown	unknown	gnl\|CDD\|240081
NZ_CP051204.1\|WP_078672521.1\|1885364_1885838_-\|acyl-CoA-thioesterase	unknown	unknown	gnl\|CDD\|224523
NZ_CP051204.1\|WP_168860295.1\|1878579_1880208_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051204.1\|WP_168803548.1\|1896935_1897946_-\|NADP-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|176190
NZ_CP051204.1\|WP_168803538.1\|1882880_1883078_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051204.1\|WP_168803550.1\|1899061_1900228_-\|nicotinate-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|235406
NZ_CP051204.1\|WP_168803539.1\|1883148_1883406_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051204.1\|WP_168860296.1\|1880916_1882116_-\|DUF763-domain-containing-protein	unknown	unknown	gnl\|CDD\|377525
NZ_CP051204.1\|WP_168860297.1\|1890108_1892022_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274514
NZ_CP051204.1\|WP_168860298.1\|1893673_1895983_-\|FdhF/YdeP-family-oxidoreductase	unknown	unknown	gnl\|CDD\|273765

Protein	Function_ID	Function_description	E-value
NZ_CP051204.1\|WP_168803540.1\|1883525_1885307_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|131259	TIGR02204, system_ATPase_and_permease_component, ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.	2.31878e-177
NZ_CP051204.1\|WP_168803541.1\|1886028_1888524_-\|outer-membrane-beta-barrel-protein	gnl\|CDD\|379720	pfam14905, OMP_b-brl_3, Outer membrane protein beta-barrel family. This family includes proteins annotated as TonB dependent receptors. But it is also likely to contain other membrane beta barrel proteins of other functions.	3.4328e-94
NZ_CP051204.1\|WP_168803545.1\|1893121_1893670_-\|putative-glycolipid-binding-domain-containing-protein	gnl\|CDD\|377662	pfam06475, Glycolipid_bind, Putative glycolipid-binding. This family has a novel fold known as a spiral beta-roll, consisting of a 15-stranded beta sheet wrapped around a single alpha helix. It forms dimers. It has some structural similarity to the E. coli lipoprotein localization factors LolA and LolB. Its structure suggests that it may have a role in glycolipid binding. Its genomic context supports a role in glycolipid metabolism.	4.76066e-55
NZ_CP051204.1\|WP_168803533.1\|1877489_1878473_-\|phosphotransferase	gnl\|CDD\|270702	cd05153, HomoserineK_II, Type II Homoserine Kinase. This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a Protein Kinase fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine. The Type II homoserine kinase subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K).	1.4936e-39
NZ_CP051204.1\|WP_168803549.1\|1898086_1898950_+\|metalloprotease	gnl\|CDD\|225203	COG2321, COG2321, Predicted metalloprotease [General function prediction only].	8.45476e-120
NZ_CP051204.1\|WP_168803548.1\|1896935_1897946_-\|NADP-dependent-oxidoreductase	gnl\|CDD\|176190	cd05288, PGDH, Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.	3.25855e-167
NZ_CP051204.1\|WP_168803544.1\|1892051_1893125_+\|nitronate-monooxygenase	gnl\|CDD\|240081	cd04730, NPD_like, 2-Nitropropane dioxygenase (NPD), one of the nitroalkane oxidizing enzyme families, catalyzes oxidative denitrification of nitroalkanes to their corresponding carbonyl compounds and nitrites. NDP is a member of the NAD(P)H-dependent flavin oxidoreductase family that reduce a range of alternative electron acceptors. Most use FAD/FMN as a cofactor and NAD(P)H as electron donor. Some contain 4Fe-4S cluster to transfer electron from FAD to FMN.	5.16276e-83
NZ_CP051204.1\|WP_168803537.1\|1882123_1882789_-\|MgtC/SapB-family-protein	gnl\|CDD\|376760	pfam02308, MgtC, MgtC family. The MgtC protein is found in an operon with the Mg2+ transporter protein MgtB. The function of MgtC and its homologs is not known.	8.65506e-42
NZ_CP051204.1\|WP_168803542.1\|1888997_1889756_+\|DUF695-domain-containing-protein	gnl\|CDD\|368292	pfam05117, DUF695, Family of unknown function (DUF695). Family of uncharacterized bacterial proteins.	9.78732e-42
NZ_CP051204.1\|WP_078672521.1\|1885364_1885838_-\|acyl-CoA-thioesterase	gnl\|CDD\|224523	COG1607, COG1607, Acyl-CoA hydrolase [Lipid metabolism].	1.0292e-51
NZ_CP051204.1\|WP_078672524.1\|1889791_1889953_-\|DUF1328-domain-containing-protein	gnl\|CDD\|227774	COG5487, COG5487, Small integral membrane protein [Function unknown].	0.00108061
NZ_CP051204.1\|WP_168803550.1\|1899061_1900228_-\|nicotinate-phosphoribosyltransferase	gnl\|CDD\|235406	PRK05321, PRK05321, nicotinate phosphoribosyltransferase; Provisional.	0
NZ_CP051204.1\|WP_168860299.1\|1896126_1896927_-\|formate-dehydrogenase-accessory-sulfurtransferase-FdhD	gnl\|CDD\|234823	PRK00724, PRK00724, formate dehydrogenase accessory sulfurtransferase FdhD.	1.37037e-86
NZ_CP051204.1\|WP_168860296.1\|1880916_1882116_-\|DUF763-domain-containing-protein	gnl\|CDD\|377525	pfam05559, DUF763, Protein of unknown function (DUF763). This family consists of several uncharacterized bacterial and archaeal proteins of unknown function.	0
NZ_CP051204.1\|WP_168860297.1\|1890108_1892022_+\|hypothetical-protein	gnl\|CDD\|274514	TIGR03303, OM_YaeT, outer membrane protein assembly complex, YaeT protein. Members of this protein family are the YaeT protein of the YaeT/YfiO complex for assembling proteins into the outer membrane of Gram-negative bacteria. This protein is similar in sequence and function to a non-essential paralog, YtfM, that is also in the Omp85 family. Members of this family typically have five tandem copies of the surface antigen variable number repeat (pfam07244), followed by an outer membrane beta-barrel domain (pfam01103), while the YtfM family typically has a single pfam07244 repeat. [Protein fate, Protein and peptide secretion and trafficking].	0.000147382
NZ_CP051204.1\|WP_168860298.1\|1893673_1895983_-\|FdhF/YdeP-family-oxidoreductase	gnl\|CDD\|273765	TIGR01701, Hypothetical_protein_Rv2900c/MT2968/Mb2924c., oxidoreductase alpha (molybdopterin) subunit. This model represents a well-defined clade of oxidoreductase alpha subunits most closely related to a group of formate dehydrogenases including the E. coli FdhH protein (TIGR01591). These alpha subunits contain a molybdopterin cofactor and generally associate with two other subunits which contain iron-sulfur clusters and cytochromes. The particular subunits with which this enzyme interacts and the substrate which is reduced is unknown at this time. In Ralstonia, the gene is associated with the cbb operon, but is not essential for CO2 fixation.	0

>NZ_CP051204.1|WP_168803541.1|1886028_1888524_-|outer-membrane-beta-barrel-protein
MRKVVLLLTGWMFLFNLALTAQQHGNKPPAGNAGNIYGKLLDAQTGKPVEYASVAVLRPDSSVLTGMLSKPNGDFNFENLTPGKYILKVNFIGYEAVFKPVQLTAKSTSLDAGNIKLRANVKSLAAVNVVGEKPAFTMAIDKRVFNVEKNLASIGGTATDVLKQVPSVSVDIDGNVSVRNGAPTIFVDGRPTTLTLDQIPADAIANIEVVTNPSAKYDAEGMSGILNIVLKKNKKAGINGQLSAGVSSLGSTNTGIDFNLRQEKFNFFINYGTRNRKSPMTSRISRKNILSDTTTYTDQLQDGDFYRNFQNGRIGVDWFMDNRNTLTISQGITGGNFNRYNDQIQNEFDIHRELVRYGTGINNSKNGFRNYSTQLGYKHTFAREGEELTADFTYNYATGDNSSEYSLQYYNLKGDTINSPVKPQYRYGSGEGKTTYITGQVDYVRPFSDKSKIEMGLRTNTRKFDNFTNTFGQNYPSGTFTLDSALSNNYHYQEQINAGYVSYSGAHGNFGYQAGLRAEQSNYTGETRFGEKASYKINYPISLFPSVFLSQKFKGDHELQLNYSRRIRRPWFRDLLPTIEYSGQNASRGNPDLRPEFTNSFELSYLKDIAHKHNVLVSLYYRNTDNAITDFYVDTTLNLNGQTQRVLLSYPINASTRNSFGAEFTVRSQITKDWDLTANVNLAQTKISAANQGDNLSNSGFTWFGKLNSNTKLPWNLTLQITGEYESRQILPQGERKPVYSIDAGLKKDMLKNKALSISLTLNDIFNSDRNLSYTSTAFSETENYRKRLTRELRLNATWRFGKMDYNLFKRKNNKSGKDNNNEMGGGDKGE
>NZ_CP051204.1|WP_078672521.1|1885364_1885838_-|acyl-CoA-thioesterase
MDSIYHTITLRFLAEPSDVNFGGKVHGGSVMKWIDQAGYTCAANWSGQYAVTVYVGGIRFFKPIAIGDLVEITATIIYTGNTSMHISIDVFAGNPRQQHKQKTTHCVMVFAAVDDNGKTIPVPKWTPRTANEISMESYAKKLMDLRKDIDEEMKPYM
>NZ_CP051204.1|WP_168803540.1|1883525_1885307_+|ATP-binding-cassette-domain-containing-protein
MQNETTAAVPAPKPGLKWTSLKKTFRLFRYVKPYWVEFALGFVFLLISSLAGLAFPRLLGDLVDPKSVNDLLHGFNKAGLLLVAVLIGQAIFSFFRTILFVNVTEKTLAALRQHVYSHMIRLPMRFFLERRVGELSSRISSDITLLQDTFTTTLAEFIRQMVIIIGGVIILLVTSWQLTAFMLAILPVMMVAAVFFGKFIRQFSKQVQTQVAAANTVVEETLQGIVNVKAFANEFFEIARYRQRTNEAARIGMKSGKYRGAFSSFIILGIFGALVAVIWRGVSMGMSTPQLLSFILYSVFIGGSIAGLAEIYTSLQKSIGATENLLEILDEPEEAITEVAQIAPGEQLGGQISFRNISFHYPSRPDLTILENISFEAEEDQKVALVGPSGAGKSTIVSLLLRLYDPVEGRILYDGKPGTSIPLSVLRSQMAVVPQDVFLFGGTIRENIAYGKPDATEAEIESAARQANAWEFIKHFPLGLETIVGERGIQLSGGQRQRIAIARAVLKNPRILILDEATSALDSESERLVQDALDKLMEGRTSIVIAHRLSTIRQADKIIVLDKGHIVEQGTHAELIGVDGGLYRMLSEMQFSH
>NZ_CP051204.1|WP_168803539.1|1883148_1883406_+|hypothetical-protein
MKVSHLLLAAGISAAMLTACGNGAQNNNQDSMNLNNSGTTDTAAILPDTAPAAQTPPGAINPGEDSARFGTGAGDSSRNPGHKSQ
>NZ_CP051204.1|WP_168803538.1|1882880_1883078_+|hypothetical-protein
MKPFVYKFFMVACVTGILCILLFACNSSREASREADSAAATVPRVDSTSVIPVDTTATKPDTTRQ
>NZ_CP051204.1|WP_168803537.1|1882123_1882789_-|MgtC/SapB-family-protein
MKHLLQTIEEDQILKVCIALLIGAILGLEREYKRKAAGMRTMTLICLSSTIFTILSAELGYPNSSDRVASNILTGVGFIGAGVIFKNDFTIDGITTAASIWIAAALGMAIGMSQYVLAIGGLAGALIVLILMEFTEKSIAEINDKRYYTIYFHEDKFPQVDVEHILNTFGLKFKRMQTVRKEDLIEVNYTVRGKRSKMERLDEFLLQNKHISQFQVQLNPL
>NZ_CP051204.1|WP_168860296.1|1880916_1882116_-|DUF763-domain-containing-protein
MPSYADMPLHYGHVPPWLAKRMALLGGAIVEAIVTDYGKSEVIRRLSDPCWFQALGCVLGMDWHSSGITTSVMGALKKAVNPRSQELGIYICGGKGRHSRETPAELMRIADKTGLPGDQLVHSSKLTAKVDNTAIQDGFQLYLHSFVLSTEGDWAVVQQGMNDASSMARRYHWHSSAFTSYTEAPHTFIYGRNQGMILNLTDTQAAATKTGILQLLEEKPAHLLPEIRNLVMPSHHEVRAENVNLKRLGSVLALAHDIHPANFESLLMLEGVGPRTLQSLTLVSEVIHGTPSRFEDPARFSFAHGGKDGHPFPVPTRIYDETIETLRDALNKAKIGHTDKQEAIRKLSTLAQRMEQDFEPNANFEKVIEREKQDSWKYGGRTVFGKAAPPKDGEQLSLF
>NZ_CP051204.1|WP_168860295.1|1878579_1880208_+|hypothetical-protein
MMSYIRSVVCLCLFFIPAGLWAQVPVVTLGPAVEEPLDGWDKLMQLKNGHTFWLHFSKKEGLRVTVYNARREQVATDSVAGSLWNAADLESTEIDGIYEINGQPVIFLQQLVKYVPVFFRLVLDPQTGKLLREDKLGELPTVQHRSVYVQENLASHDCYVEKDPDSDYYAVAFFNGAEIQRNDSMRERIRVMHFSPAHELINTGLYYLPDTAYNYFSYISLSVHGKEKVYMSTVGFNAKRKGNEPWSKVLFSALSPDSATFAHHVLDYTANFRDVSGYQQFLPARNEVKLMLYAPGQRAEGSSGIFLNTLLASGKLRKHQQLSFPELGKNVQINLGYKEDYKGVPQRVYWHADGSGTLLLEALTRYKQGNTQINKLHTNMGDIGVALLDSSGRENETLAVSKYQSITGVCEPFSLHRRMKSEWVFRNKIAALNTNTYLSYDYVNIPNATFILFNDYLQYLETGGQDKVKKPLKYAADANVVCYRFYNGKMERLFLFGAPEVTKGYYCMMGASSYDAVQRVYATVMISRKGTEKKAAVAWIQF
>NZ_CP051204.1|WP_168803533.1|1877489_1878473_-|phosphotransferase
MKTVFPATYSTLCPSALSAFLSEKYALEDVQCQLLVRGVGDTYLARTSADRFILRVYRSTHRSLPQIQEEVALLQALKAAEVSVSYPLQDIAGETIQQLNAVEGERCAVLFSYAPGHPVRLLNDQQCQLLGREMARFHQVSAAFSPVKARWEFNEESMFVRPLTLLQPFFANNAEDYTWLQQAAATAAARLSAMKELPMGYCHFDFLPKNMHFDANSITLFDFDFMGYGWLVNDIASFWQYLSLEVYTKRMTQDEADRQYQLLLDAYREHRPLDEAALEAIPFISLGWWLFYMGFHTTHDQFHAFVQPGHLKLFTGLLRHLANTYWK
>NZ_CP051204.1|WP_168803532.1|1877027_1877489_+|hypothetical-protein
MKAFLLSGLLMLLVTAGNAQTPTAADFPKLHWLEGTWTKKASRPGRTGFEQWERLSGTAMKGIGVTMKEKDTLFKEGLQLQAKAHALYYVADVAENKGLVWFKITAITADGFTCENPAHDFPQKIVYQKTDDQLKVTISGDGKSIDFFFEKKP
>NZ_CP051204.1|WP_168803542.1|1888997_1889756_+|DUF695-domain-containing-protein
MHKDYRPDWDIYTCHIEESPAVIGLDLDLRRFAPLKEKPNAIYITVYLNNPREDGFPQNDEFAIMGEIEDSLVEQLTTNLDAHFVGRTFSNGVRDFYFYTGNLLLHDKFIADAMIKFPDYRYDYGVKEDNNWELYFDFLFPDVYEFQRIQNRKVLRMLRQHGDMSERERPIEHWIHFRTEEDKTAYWEHIRENGFEIAHDMKNDNPEFPFKLCVSRSDKASEATIDSVVMTLWELAQQVNAEYDGWETSIVK
>NZ_CP051204.1|WP_078672524.1|1889791_1889953_-|DUF1328-domain-containing-protein
MLRWALIFFIVAIVAAIFGFGGIAAGAASIAKILFFIFLVLFLISLLSGLLRK
>NZ_CP051204.1|WP_168860297.1|1890108_1892022_+|hypothetical-protein
MRTELKILAAISVTCWLLCWCQLTFAQDKPVADTVPKRGNGLMKKIGEYRDSLRNKEYRQSFIRRITRQDVETPDENLDSVITKSEAYFTPFVGKVIRNIYYRKVKVFGPRNINDTTFTTSMKLIHLANRLHFDSREWVIRQSLFFREGSRLDPFELADNERYLRNRPFFSDARIHVRNANPDSDSVDVEVITKDVFEYGVDLSQFSATNIKTRVSNNNLLGAGQGLQVGFQWRSDYTPTWNTEARYTKYNVFGSFVDVGVGYSTLNNTTPLDTNVYEGTIYVTFNRPLYRNAAKWVGGLTLANNWSINILGREKQTIDSLLYRDYRYTVIDGWAGYNFINNYEHNGTIGHKPNFAVLFRHFNLNFSRTPDQMQFKEDPVYNDHRYYLLEFQVYRLDYFKTRQFFGFGRTEDIPLGYNLKAATGWETWKDRRRLYTGLEAQKYWTTRRQGLFNTSAGVSTFWQEGKLEDAVIHARAEYYSRLFSIRKARFRQFLNLDYLESPNPFFYKPLNINNDNGIWGYRYTRLNGYQRLNFGSETVYYSPLRFLGFKFNFFASLQASMVTAKNDNLFSNPIYMGIGGGFRVKNENLSLNTIKVSGYYFPNAPPLQPKSLLEITTIVDFRFDISALKAPAFLSFF
>NZ_CP051204.1|WP_168803544.1|1892051_1893125_+|nitronate-monooxygenase
MEWQNRLTSLLGIDYPFIQAPMLGITTPAMVAAVSNGGGLGSLPVGGLPPARVAALIAEVKALTRRPFAVNLFTYEVPQADQPEQFEQMQQYLQQLYKTNGLTVPAVAFDTVKTHAYQEQLPVLLEAGISLVSFTFGIPDEASIALLKAGGCVLLGTATSVKEAVALQAAGCDAIVAQGIEAGGHRGSFLPGPLPQVATMALVPQITDRVAVPVIAAGGIADGRGAAAAFCLGASGVQCGSVLLRSPESAATPHHKDKVGAVTDTGTRITRAFSGRWARGIANVLMDGIEASGLPLNVYPVQDALTQAVRKVAKELDNPDFIVMYAGQAAQLAKPLPAATLMEEIRTSAEKILSGQP
>NZ_CP051204.1|WP_168803545.1|1893121_1893670_-|putative-glycolipid-binding-domain-containing-protein
MGPVVWQATLWPATEFLTVTKQEHNNLVKGIINGCTDADPFSIQYEIEVTPEWKVSSFHIRRDGLQPTALKLTSDLNGHWFDKDGNHIEAFDDCTDIDISLTPFTNTLPIRRLTFEQGERKLLQMLYIKLPEFELQKLSQYYTKMEDRLYLYENGDSGFRAELPIDENGIVKDYPGLFTRIY
>NZ_CP051204.1|WP_168860298.1|1893673_1895983_-|FdhF/YdeP-family-oxidoreductase
MSIKGLHTEFTPVKFTGLKLTKPATVAAGIPAVVSSMKHMLEAMNAFRAMKALLELNQKDGFDCPGCAWPDPDDERSPIAEYCENGAKAIAEEATTRKLDPAFFAANSIDSLGALSDYEIGKKGRIAQPMYLAPGATHYTPISWNDAYHKIAAHLQQLDTPDEAVFYTSGRTSNEAAFLYQLMVREYGTNNLPDCSNMCHESSGVALGEAVGIGKGSVTLEDVHQAEVIIILGQNPGTNHPRMLTALQKAKANGAVIIAVNPLKETGLLNFLNPQTVKGILQVQTHLTDIFLQIKINGDMALLKALALLLLEEEDKHPGTVFDQSFISNNTSGYNEYIAHLRQQRLPDLAAACGISEAQLREAAAALMHKQKIVACWAMGLTQHKNSVDTIREVVNLLLLKGSIGKPGAGTCPVRGHSNVQGDRTMGIYEKPADALLQKLEAVYGFKPPYKHGHDVVHAIHAMHRGDAKVFIAMGGNFLSATPDTAYTAKALRNCRLTVHVSTKLNRSHLVHGREAIILPCLGRSDKDIQQQQAQFVTCENSMGVVQMSKGNLHPISAELKSEPVIVCEMARAILGPQSKVPWEQYTQHYDHIRDAIEKVIPGFDDYNKRVRHPGGFYLPNGSRTGQFNTGTGKANFNVAPVTTTPLSREEYLMMTIRSHDQFNTTIYGLDDRYRGVHHERRVIFMNPQDIASGGFTAGQVVDLYNYHGQTERIAPGFIIVEYDIPAGCTATYFPETNVLVPVNTVADKSNTPASKSVIIQIKSSTIKR
>NZ_CP051204.1|WP_168860299.1|1896126_1896927_-|formate-dehydrogenase-accessory-sulfurtransferase-FdhD
MTNAVVHTRIKKITATGVTDTEDVLAAEEPLEIRLEHGPTHNRRQQNIAVTMRTPGQDEELAAGFLFTEGIIPGTAAIRQVTLAETPGGSIATVALKEQVVPFLDKSQRHFQATAACGMCGKSSIENIHTGVNVSHSDRRAPGQWLSQLPEQLRARQALFAHTGGLHAAALVDEQGRIQLLREDIGRHNAVDKVIGAALAQQFPLPQSLLLLSGRAGFELIQKAAMAGIPVIAAIGAPSSMAVKMAAAWNITLIGFLKEDRYNQYT
>NZ_CP051204.1|WP_168803548.1|1896935_1897946_-|NADP-dependent-oxidoreductase
MKIQQILLNERPEGLPAADTFKTVDVELPGLNDGEVLLQPLYFSVDPYMRGRMSDARSYIPPFKVQEPIESGGVATVTESKDARFAPGDLVMPGGGKNFFPWATGFVFSGDHLRKIDASIPPSYYLGVLGMPGLTAYFGLMDIGKPKAGETVVISGAAGAVGLVAGQIAKIQGCRVVGIAGGEEKVKLLTSDFNFDAAINYKGNTHLGAAVAAACPNGVDIYFDNVGGEISDAVMEHLNFFARIPVCGQIALYNSTEVPIGPRVQPTLIKFSVLMQGFTIGNYAHRYLEGIQQLGEWIRAGKIKYTETIIEGFDQLPAALLGLFSGQNSGKMIVKV
>NZ_CP051204.1|WP_168803549.1|1898086_1898950_+|metalloprotease
MRLDDERLSDNVEKRSGGGKRTLIGGGIGGVIVIVLALLFKQDPNQVNQVLQQVQGPGGTEKVEQLSKENASAIELFSSKVLASTEDVWAAEFRRLNMEYERPKMVLFEDATTSGCGAAESAMGPFYCPADRMVYLDATFFKELEDRFGVKGDFAKAYVIAHEVGHHVQNLLGISRQVQAMRSRLSETEYNKLSVKLELQADFLAGLWANHAQQMRNILEAGDIESGLNAASAVGDDKLQEASTGRVVPDAFTHGTSQQRMFWFKKGFDSGDLSQGDTGIGLGQAGR
>NZ_CP051204.1|WP_168803550.1|1899061_1900228_-|nicotinate-phosphoribosyltransferase
MKLNSILDNDFYKFTMQHCVIKLFPKARARYKFINRGQHAYPPGFDKLLRRAVDEMQYLQLSQEEKDFLAVTCPYLDPTYLDFLQGYRYNPSEIHITQHGDQLEVHADGYWYRTILWEVPLMSLICELYYEATGQQRVPDEEVIAITRAKIERYKELNITIADFGTRRRHSLAVQKLVVQTLREYGGHTFIGTSNVHLAMRNGVKPVGTHAHEWFMFHAAKYGFKMANMLGLEHWVHVYRGDLGIALSDTYTTPVFFEQFDKKFAKLFDGVRHDSGDPLRFADETILHYQGKGINPLSKTIIFSDGLNYEKVAAIAAHCRGKIGMSFGIGTNFTNDVGLTPLNIVVKMYEARPEDAPRWTPVVKLSDEKGKYTGDEHMIALAKEMLEL

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Crispr_ID: NZ_CP051204_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP051204_3

2014391-2014470

Orphan

Consensus_repeat	Method
GGTTCGGTTTACATCGATTGCATGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP051204_3

>merge|NZ_CP051204|3|2014391-2014470|CRISPRCasFinder
GGTTCGGTTTACATCGATTGCATGATGTTACAATCCCGGATTCCGTTGGATGGATCGGTTGGTTTACATCGATTGCATGA

>NZ_CP051204|3|3|2014391-2014470|CRISPRCasFinder
GGTTCGGTTTACATCGATTGCATGA	TGTTACAATCCCGGATTCCGTTGGATGGAT
CGGTTGGTTTACATCGATTGCATGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP051204.1\|WP_168803638.1\|2008935_2011536_+\|polynucleotide-kinase-phosphatase	unknown	unknown	gnl\|CDD\|274963
NZ_CP051204.1\|WP_168811714.1\|2022640_2023531_+\|decaprenyl-phosphate-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|260126
NZ_CP051204.1\|WP_168860333.1\|2006487_2007876_+\|3'-terminal-RNA-ribose-2'-O-methyltransferase-Hen1	unknown	unknown	gnl\|CDD\|274962
NZ_CP051204.1\|WP_168803639.1\|2011567_2012518_+\|NADP-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|176191
NZ_CP051204.1\|WP_168803640.1\|2014013_2014361_+\|YraN-family-protein	unknown	unknown	gnl\|CDD\|376717
NZ_CP051204.1\|WP_168811710.1\|2007875_2008952_+\|nucleotidyltransferase	unknown	unknown	gnl\|CDD\|313370
NZ_CP051204.1\|WP_168803644.1\|2017557_2018217_+\|NAD(P)-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|224996
NZ_CP051204.1\|WP_168803636.1\|2005040_2006336_-\|O-acetylhomoserine-aminocarboxypropyltransferase/cysteine-synthase	unknown	unknown	gnl\|CDD\|273555
NZ_CP051204.1\|WP_168803641.1\|2014743_2015067_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051204.1\|WP_168860335.1\|2018299_2019949_-\|M1-family-metallopeptidase	unknown	unknown	gnl\|CDD\|341066
NZ_CP051204.1\|WP_168860332.1\|2000681_2002475_+\|elongation-factor-4	unknown	unknown	gnl\|CDD\|235462
NZ_CP051204.1\|WP_168803643.1\|2016681_2017431_+\|menaquinone-biosynthesis-protein	unknown	unknown	gnl\|CDD\|270352
NZ_CP051204.1\|WP_168803647.1\|2021740_2022514_+\|acyl-CoA-desaturase	unknown	unknown	gnl\|CDD\|224316
NZ_CP051204.1\|WP_168860334.1\|2015199_2016540_-\|adenylosuccinate-lyase	unknown	unknown	gnl\|CDD\|236452
NZ_CP051204.1\|WP_168803634.1\|2000225_2000483_-\|acyl-CoA-binding-protein	unknown	unknown	gnl\|CDD\|376410
NZ_CP051204.1\|WP_168860338.1\|2024957_2025689_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|180838
NZ_CP051204.1\|WP_168860336.1\|2019994_2021638_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|173853
NZ_CP051204.1\|WP_168811712.1\|2012593_2013808_-\|mannose-6-phosphate-isomerase,-class-I	unknown	unknown	gnl\|CDD\|185085
NZ_CP051204.1\|WP_168860337.1\|2023530_2024859_+\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223354
NZ_CP051204.1\|WP_168803635.1\|2002620_2005044_+\|AsmA-family-protein	unknown	unknown	gnl\|CDD\|379224

Protein	Function_ID	Function_description	E-value
NZ_CP051204.1\|WP_168803638.1\|2008935_2011536_+\|polynucleotide-kinase-phosphatase	gnl\|CDD\|274963	TIGR04075, Ser/Thr_phosphatase_family_protein, polynucleotide kinase-phosphatase. Members of this protein family are the bacterial polynucleotide kinase-phosphatase (Pnkp) whose genes occur paired with genes for the 3' terminal RNA ribose 2'-O-methyltransferase Hen1. All members of the seed alignment belong to a cassette with the Hen1. The pair acts in bacterial RNA repair. This enzyme performs end-healing reactions on broken RNA, preparing from the RNA ligase to close the break. The working hypothesis is that the combination of Pnkp (RNA repair) and Hen1 (RNA modification) serves to first repair RNA damage from ribotoxins and then perform a modification that prevents the damage from recurring. [Transcription, RNA processing].	0
NZ_CP051204.1\|WP_168811714.1\|2022640_2023531_+\|decaprenyl-phosphate-phosphoribosyltransferase	gnl\|CDD\|260126	cd13963, PT_UbiA_2, UbiA family of prenyltransferases (PTases), Unknown subgroup. Many characterized members of the UbiA prenyltransferase family are aromatic prenyltransferases and play an important role in the biosynthesis of heme, chlorophyll, vitamin E, and vitamin K. They contain two copies of a motif similar to the active site DxxD motif of trans-prenyltransferases and are potentially related. Prenyltransferases (PTs) catalyze the regioselective transfer of prenyl moieties onto a wide variety of substrates and play an important role in many biosynthetic pathways. The function of this subgroup is unknown.	1.37258e-116
NZ_CP051204.1\|WP_168860333.1\|2006487_2007876_+\|3'-terminal-RNA-ribose-2'-O-methyltransferase-Hen1	gnl\|CDD\|274962	TIGR04074, Methyltransferase_type_12, 3' terminal RNA ribose 2'-O-methyltransferase Hen1. Members of this protein family are bacterial Hen1, a 3' terminal RNA ribose 2'-O-methyltransferase that acts in bacterial RNA repair. All members of the seed alignment belong to a cassette with the RNA repair enzyme polynucleotide kinase-phosphatase (Pnkp). Chemically similar Hen1 in eukaryotes acts instead on small regulatory RNAs. [Transcription, RNA processing, Protein synthesis, tRNA and rRNA base modification].	0
NZ_CP051204.1\|WP_168803639.1\|2011567_2012518_+\|NADP-dependent-oxidoreductase	gnl\|CDD\|176191	cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction.	6.16155e-92
NZ_CP051204.1\|WP_168803640.1\|2014013_2014361_+\|YraN-family-protein	gnl\|CDD\|376717	pfam02021, UPF0102, Uncharacterized protein family UPF0102. The function of this family is unknown.	7.86406e-32
NZ_CP051204.1\|WP_168811710.1\|2007875_2008952_+\|nucleotidyltransferase	gnl\|CDD\|313370	pfam10127, Nuc-transf, Predicted nucleotidyltransferase. Members of this family of bacterial proteins catalyze the transfer of nucleotide residues from nucleoside diphosphates or triphosphates into dimer or polymer forms.	6.35018e-15
NZ_CP051204.1\|WP_168803644.1\|2017557_2018217_+\|NAD(P)-binding-domain-containing-protein	gnl\|CDD\|224996	COG2085, COG2085, Predicted dinucleotide-binding enzymes [General function prediction only].	2.52768e-32
NZ_CP051204.1\|WP_168803636.1\|2005040_2006336_-\|O-acetylhomoserine-aminocarboxypropyltransferase/cysteine-synthase	gnl\|CDD\|273555	TIGR01326, Includes:_O-acetylhomoserine_sulfhydrylase, OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities. [Amino acid biosynthesis, Aspartate family, Amino acid biosynthesis, Serine family].	0
NZ_CP051204.1\|WP_168860335.1\|2018299_2019949_-\|M1-family-metallopeptidase	gnl\|CDD\|341066	cd09603, M1_APN_like, Peptidase M1 family similar to aminopeptidase N catalytic domain. This family contains mostly bacterial and some archaeal M1 peptidases with smilarity to the catalytic domain of aminopeptidase N (APN; CD13; alanyl aminopeptidase; EC 3.4.11.2), a type II integral membrane protease belonging to the M1 gluzincin family. APN preferentially cleaves neutral amino acids from the N-terminus of oligopeptides and, in higher eukaryotes, is present in a variety of human tissues and cell types (leukocyte, fibroblast, endothelial and epithelial cells). APN expression is dysregulated in inflammatory diseases such as chronic pain, rheumatoid arthritis, multiple sclerosis, systemic sclerosis, systemic lupus erythematosus, polymyositis/dermatomyosytis and pulmonary sarcoidosis, and is enhanced in tumor cells such as melanoma, renal, prostate, pancreas, colon, gastric and thyroid cancers. It is predominantly expressed on stem cells and on cells of the granulocytic and monocytic lineages at distinct stages of differentiation, thus considered a marker of differentiation. Thus, APN inhibition may lead to the development of anti-cancer and anti-inflammatory drugs. APNs are also present in many pathogenic bacteria and represent potential drug targets. Some APNs have been used commercially, such as one from Lactococcus lactis used in the food industry. APN also serves as a receptor for coronaviruses, although the virus receptor interaction site seems to be distinct from the enzymatic site and aminopeptidase activity is not necessary for viral infection. APNs have also been extensively studied as putative Cry toxin receptors. Cry1 proteins are pore-forming toxins that bind to the midgut epithelial cell membrane of susceptible insect larvae, causing extensive damage. Several different toxins, including Cry1Aa, Cry1Ab, Cry1Ac, Cry1Ba, Cry1Ca and Cry1Fa, have been shown to bind to APNs; however, a direct role of APN in cytotoxicity has been yet to be firmly established.	8.09003e-146
NZ_CP051204.1\|WP_168860332.1\|2000681_2002475_+\|elongation-factor-4	gnl\|CDD\|235462	PRK05433, PRK05433, GTP-binding protein LepA; Provisional.	0
NZ_CP051204.1\|WP_168803643.1\|2016681_2017431_+\|menaquinone-biosynthesis-protein	gnl\|CDD\|270352	cd13634, PBP2_Sco4506, The conserved hypothetical protein SCO4506 exhibits the type 2 periplasmic-binidng protein fold. This group includes the SCO4506 protein from Streptomyces coelicolor and related hypothetical proteins. SCO4506 is an ortholog of Ttha1568 (MqnD) from Thermus thermophilies HB8. MqnD is an enzyme within an alternative menaquinone biosynthetic pathway that catalyzes the conversion of cyclic de-hypoxanthine futalosine to 1,4-dihydroxy-6-naphthoate. Menaquinone (MK; vitamin K) is an essential lipid-soluble carrier that shuttles electrons between membrane-bound protein complexes in the electron transport chain. SCO4506 has significant structural homology with the members of type 2 periplasmic-binding fold protein superfamily. The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	7.39273e-81
NZ_CP051204.1\|WP_168803647.1\|2021740_2022514_+\|acyl-CoA-desaturase	gnl\|CDD\|224316	COG1398, OLE1, Fatty-acid desaturase [Lipid metabolism].	5.77581e-27
NZ_CP051204.1\|WP_168860334.1\|2015199_2016540_-\|adenylosuccinate-lyase	gnl\|CDD\|236452	PRK09285, PRK09285, adenylosuccinate lyase; Provisional.	0
NZ_CP051204.1\|WP_168803634.1\|2000225_2000483_-\|acyl-CoA-binding-protein	gnl\|CDD\|376410	pfam00887, ACBP, Acyl CoA binding protein.	2.21242e-30
NZ_CP051204.1\|WP_168860338.1\|2024957_2025689_+\|SDR-family-oxidoreductase	gnl\|CDD\|180838	PRK07102, PRK07102, SDR family oxidoreductase.	6.64354e-131
NZ_CP051204.1\|WP_168860336.1\|2019994_2021638_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|173853	cd00995, PBP2_NikA_DppA_OppA_like, The substrate-binding domain of an ABC-type nickel/oligopeptide-like import system contains the type 2 periplasmic binding fold. This family represents the periplasmic substrate-binding domain of nickel/dipeptide/oligopeptide transport systems, which function in the import of nickel and peptides, and other closely related proteins. The oligopeptide-binding protein OppA is a periplasmic component of an ATP-binding cassette (ABC) transport system OppABCDEF consisting of five subunits: two homologous integral membrane proteins OppB and OppF that form the translocation pore; two homologous nucleotide-binding domains OppD and OppF that drive the transport process through binding and hydrolysis of ATP; and the substrate-binding protein or receptor OppA that determines the substrate specificity of the transport system. The dipeptide (DppA) and oligopeptide (OppA) binding proteins differ in several ways. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Similar to the ABC-type dipeptide and oligopeptide import systems, nickel transporter is comprised of five subunits NikABCDE: the two pore-forming integral inner membrane proteins NikB and NikC; the two inner membrane-associated proteins with ATPase activity NikD and NikE; and the periplasmic nickel binding NikA, which is the initial nickel receptor that controls the chemotactic response away from nickel. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand binding domains of ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	6.31215e-135
NZ_CP051204.1\|WP_168811712.1\|2012593_2013808_-\|mannose-6-phosphate-isomerase,-class-I	gnl\|CDD\|185085	PRK15131, PRK15131, mannose-6-phosphate isomerase; Provisional.	1.56985e-97
NZ_CP051204.1\|WP_168860337.1\|2023530_2024859_+\|FAD-binding-oxidoreductase	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	4.65859e-33
NZ_CP051204.1\|WP_168803635.1\|2002620_2005044_+\|AsmA-family-protein	gnl\|CDD\|379224	pfam13502, AsmA_2, AsmA-like C-terminal region. This family is similar to the C-terminal of the AsmA protein of E. coli.	1.77526e-11

>NZ_CP051204.1|WP_168803640.1|2014013_2014361_+|YraN-family-protein
MHPQETGREGERIAQEYVRRFCTIRHTNWKCGRKEIDIIAENGGTVFFIEVKARNGDRFGWPEEAVDRRKQAHIQLVAAAYLEHFHLYPEAVRFDIIAVTFTAAGHELLHLRDVF
>NZ_CP051204.1|WP_168811712.1|2012593_2013808_-|mannose-6-phosphate-isomerase,-class-I
MVFMKLFRLDGKIQHYAWGGSTYIPALLGIAPSEKPSAEYWMGAHPSAPSAITTSNGPVPMNELIQQDPAGIVGPQVWQQFRELPYLFKILDVKDMLSIQVHPTKEEAEKGFARENAAGIPLNAPHRNYKDANHKPEIMVALSEFWLLHGFLPEDKLQQVLLDTPEFTSLVGIYEKEGYYGLYKSVMEMPQALANIILRPLTDRLIPDYRAGKLSKSDPAFWAARAVLNDPNGADNLDRGIFSIYFFNIMHVQPGQAVFQDAGIPHAYLEGQNVELMANSDNVLRGGLTPKHIDVPELLKHTRFEAVHPKVLTGDSISGGLEKIYPTPAPDFVVSKINISAGQVYTYTTKAAEIMIVMSGAATIKGSDTLDLHKGQCVMAAYGESYEITTSGNVEIFKATVPVK
>NZ_CP051204.1|WP_168803639.1|2011567_2012518_+|NADP-dependent-oxidoreductase
MKAIAVSEFKGIPTLMDLPKPAVRPGTVLVKVQAAGINPFDWKMIDGIMNNGKTPHQFPLIMGVDGAGVIEEVGEGVTHFKKGDLVYGQFIHMPIGEGSYAEYAIVPEKAGLTMAPMRISPEEAAAVPTSGMTALQLIDKLKLQKGDVVLINGATGGVGSFATQIAAAKGLKVIATVGDEADAKRMHQLGAAVTVNYKKAPLADQVKAKFPQGIDGLIDMVSDKAGFENNLQLVKEGGGAFTTLFVADDEALKARNLHGGNFETEGGPAALDQLSRLIDQGQIKVPVENRIRLEDVPAAIAASREGRASGKTVIIM
>NZ_CP051204.1|WP_168803638.1|2008935_2011536_+|polynucleotide-kinase-phosphatase
MARRNNLSHISIPELSLVLLVGPSGAGKSTFARKYFKPTEIISSDVCRGLISDDENNQAVSADAFELARFIAAKRLKHGLLTVIDATNVQSESRRDWIRLAREYHVLPVAIVLNLPEEVCSKRNRDRPDRNFGGHVIPQQISQLKRNLRHLKEEGFRQVYELRSEEDVTMLETISRTPLYNNKREEHGPFDIIGDVHGCYDELCMLLEQLGYGIDREHAELISAPQTTNEDGYTRTRKPVFVGDLVDRGPASPQVLRLVMNMVNNGAALCVPGNHDAKLLKWLNGKQVQLKHGLEKTVEQLGAEPPEFLESIKTFIDGLISHYVLDDGKLVVAHAGLKESMQGRGSGAVREFCMYGETTGEIDEFGLPVRYNWALEYKGKAMVVYGHTPVPQAQWLNRTIDIDTGCVFGGSLTALRYPEKELVSVPALQQYAVPARPIGYNADSSLSVQQQYDGVLDIADFIGKKIVNTRYSHSITIREENSIAALEVMSRFAINPRWMIYLPPTMSPVETSTLPGLLEHPEGGLQYFRDTGVDKVVCEEKHMGSRAIVVVCRNEDVARDRFGVDGEGIGVVYTRTGRSFFADKGLEQAFLARVNTALESSGFYNDFQSDWVCLDCELMPWSAKAQALLQQQYAAVGAAAGHALPAVTAALEQAVRNNVPAQLLLEKYRSRQQQVSDYVAAYRQYCWPVHRLEDYKLAPFHIMATEGKTFFDKDHEWHMTHIRKICEAEPELLLATAYRVVQIGDPESELAAVQWWEQLTAAGGEGMVMKPYSFLTKDARGLVQPAVKVRGKNYLRIIYGPEYDAPENLARLRSRGLGAKRSLALREFALGLEGLERFVGKEPLQMVHQCVFGILALESEPVDPRL
>NZ_CP051204.1|WP_168811710.1|2007875_2008952_+|nucleotidyltransferase
MTYTTLKEQREYLLLECISGSKAYNLQVPSSDTDLKGVFILPQREVYGMSFTDQVANESNDEVYFEIKRFLELLEKNNPNILELLSTQQENCLFRHPLMDLVKPEDFLSRLCMDTFAGYAQTQIKRARGLNKKINQSFPETRKDILEFCYVVQGSQSVPLKQWLEAHQLQQEDCGISRIDHFRDAYALFHRYQFPRPVKLKGLFSGADANDVQLSAIPQGVVPAAIMHFNKDGYTVYCKEFAAYWDWVEHRNEARYQHNQALGADYDSKHMMHTFRLLTMAEEIARYREVRVFRKDRDFLLRIRTGEFTYDTLLQMAAEKLTNIQELYAQSDLPERPDPALTQRLLIKIREEFYGKKK
>NZ_CP051204.1|WP_168860333.1|2006487_2007876_+|3'-terminal-RNA-ribose-2'-O-methyltransferase-Hen1
MLLTITTTRNPATDLGYLLHKHPAKVQTFPLTAGDVHVFYPEATAEKCTAALLLDLDPVRLTRKSGPGGNDFALEAYVNDRPYVASSFMSAAISQAYSSAMNGRCKDKPELVDVAFPLEVGLSVLPVNGGEPLLRSLFEPLGYEVNVQSFPLDSRHPEWGQSRYYQVTLKNTLPVWMLLSQLYVLIPVCDNDKHYFVGSHEIEKLMEKGRGWLEDHPAKELIVRRYMKHLGPLTRQALNLIMKDEAAPEEVEDMPEPVEKVRLHDLRLQTVRDLLLEHQASSVADLGCGEGKLLRLLTEKSAFTRILGMDVSYRSLEIAGEKLKLDRMSDKQRKRLELIQGSLLYKDKRLSGFDAATLVEVIEHLDLPRLAALEKVVFEYARPSLVIITTVNAEYNIKYESLAAGTFRHNDHRFEWTRPEFEAWAATVAERFGYTVTFRPLGEWDDAVGAPSQLALFTIAAA
>NZ_CP051204.1|WP_168803636.1|2005040_2006336_-|O-acetylhomoserine-aminocarboxypropyltransferase/cysteine-synthase
MSRKLHFETLQVHAGYNPDPTTKSAAVPIYQTTSYTFDSAEHASDLFELKQFGNIYTRIMNPTTDVFEKRVAALEGGVGALAVASGQAAQFIALHNILLPGDNFVTSSYLYGGTYNQFKVSFKRIGVEARFADLDNPESFEKQIDENTKAIYVETIGNPGFAIPDFEKLSAIARKHDLPLVVDNTFGAAGYLCRPLEHGANVVVEAATKWIGGHGTSIGGIIVDGGNYNWGNGKFKQFSEPDDAYHGMKFWEVFGSHSPFGNIAYIIRARVTGLRSWGPALAPQNSFLFLQGLESLSLRVQRTVDNALQLAQWLQQQPQVEYVNYPGLPGNKYHGLAQKYLQNGFGGVLSFKIKGGKEAADKFVQSLQLIYHLANVGDSKTLIIHPATTTHSQLSEEEQRAAGVEPGLLRISLGVEHIDDIKEDIQQAFGA
>NZ_CP051204.1|WP_168803635.1|2002620_2005044_+|AsmA-family-protein
MRKWLKVVLIAGGSLVALIILLSVGLALYIKGNKAAFLKQITDQLNDNINGELSVEDMEPSLFRSFPNVSIALKKVVLRDSLWQQHHHALLDLDYVFVRVNTLSLLRKHVDVKEVSLEKGNIYLFTDSTGYTNTSALTASKPGKKKKASRDADIRNIGLSQITFTIDNRQKFKLFELDIQQMDGKLRSSDSGMHLDMRSSILARSFAFNTNKGSYLKNKTLGLDLSLFFNKITKQLIIPEQQIKIDQTPVRIAGVFDFSQKPPPFRLKINANQVLLQDAASWLSPNISGKLATIHLTAPLDAEANLEGRMKFRDTPRVVVTWKTTKNTLVTAAGEWNDCSFTGRFNNEVLPGAGHNDENSAVNIFGLRASLGEVPLEADTIRVVNLKHPLLRGHFRSQFPLAHLNTAASEVPILFSEGTAAADLYYTGPVLKDDNTPSALEGTVQVQRGGFTYLPRDLTFHDCSATLQFTGQDLLVRNVRIQSQKSALQMEGTIRNMLNLYFTAPEKIELDWKIRSALVDLNEFRSFLTARRKGKKAAHKKKARTESRVGQQLDKVLAASNVKMDVALDKIVFEHFTAQNVKALIAMTESDIQLNKIGFQHAGGTAQASGSVHQQGANNTFKINANISNVHIAQLFYAFSNFGMESLKSDNLRGIVSAKADIKGNVLDNGALAKHSLFGTVNFNLRNGALVNFGPLEDIGAFLFRRRRLDSITIENLSNTLQIQGSKIMIPPMRIASSAVNIDVNGVYGLAGGTNINLDVPLRNPAKDSAITDKAEKRRRSRKGIILHLHAVSGSDGKVKIKLGKGD
>NZ_CP051204.1|WP_168860332.1|2000681_2002475_+|elongation-factor-4
MKNIRNFCIIAHIDHGKSTLADRLLEFTKTISDRDMQAQVLDDMDLEREKGITIKSHAIQMNYTAKNGEKYTFNLIDTPGHVDFSYEVSRALAACEGALLLVDAAQGIQAQTISNLYLALENDLEIIPVINKIDMPGAMIEEVKDQIIELIGVKDEDILLASGKTGIGIEDILEAIVTRIPGPKGSLDAPLQALIFDSVFNSFRGIIAYFRVYNGSIKKGDKIKFVNTGEEYEADEVGILKLGLEPRKEVFAGDVGYIITGIKSAKEVKVGDTITLASRPCEEGIKGFQEVKPMVFAGIFPVVTEDFEELRECMDKLQLNDASLTYELETSQALGFGFRCGFLGMLHMEIIQERLEREFNQTVITTVPNVGFIAHTTREGVVIVNNPSEMPDPTKLERIEEPFIRAQIITKPEYIGNIMTLCLGKRGILLNQSYLTTTRVELMFELPLTEIVFDFYDKLKSQTRGYASFDYTPIGFRDSDIVKMDILLNGDKVDALSALIHRSRAQDFGRKLCEKLKDLLPRQQFLIAIQAAVGAKILARENISAMRKDVTAKCYGGDISRKRKLLEKQKEGKKRMRQIGNVEVPQEAFLAVLKLDD
>NZ_CP051204.1|WP_168803634.1|2000225_2000483_-|acyl-CoA-binding-protein
MDLTAQFEQAAAESKTLSEKPSNEILLQLYSLYKQGSTGDVDTDPPANPFDFVAKAKHEAWAALKGKSKEAAMQEYIDLVKRLKG
>NZ_CP051204.1|WP_168803641.1|2014743_2015067_+|hypothetical-protein
MNLWSLIVFIQQTVGAVAINSSLPCRIIQEQPYSRRLFVQMEAVEGEENLLLTISDNHHSPVRMIPIAPNSLPAGQLVCLTGLSAGEYIARVTVAGRVAEKKIEIRQ
>NZ_CP051204.1|WP_168860334.1|2015199_2016540_-|adenylosuccinate-lyase
MQLQPLTAISPLDGRYRKQLDELAGYFSEFALIRYRVMVEVEYFIALSEQKLFTLPKAKFASLRKIYQEFTIEHAQLIKDTEKITNHDVKAVEYFLKNELKNLGLEDKLEWVHFGLTSQDVNNTATPLLWKDAVEHVYMPALANLVLALRKLGESWMKVPMLARTHGQPASPTILGKEILVFVERLEGQIKLLGEIPFAAKFGGATGNFNAHTVAFPKINWEKFGEKFVNNTLGLQRMKYTTQIEHYDNIAAQFDALKRVNNILIDFCRDVWTYISMDYFKQKIKKNEVGSSAMPHKVNPIDFENAEGNLGIANAVFEHLSAKLPISRLQRDLTDSTVLRNVGVPFGHTLLATKSIQKGLDKLILNEAKLKEDLENNWAVVAEAIQTVLRRENYPQPYEALKELTRGGEHITQKSMHKFIDGLKISAALKKELKAITPHNYTGLWQ
>NZ_CP051204.1|WP_168803643.1|2016681_2017431_+|menaquinone-biosynthesis-protein
MERKVKVAAVSYLNTKPLLYGFRNHPVMEQMELSVDYPAKIAQQLIDGEVDVALVPVAIIPKLKEHHIIADYGIGAEGPVASVCLYSDVPLNEIKRIYLDYQSRTSVALLKILVKEHWKLEVELVPTTGDYEDKIKGTDAGLVIGDRALAQRKVSPFIFDLAEHWMRFTSLPFLFAAWISNKQLPEAFIQQFNDATSIGIKNIPAVVAENPYDLYDLTTYYVHNLSYPITPAKRQGMQKFLSYIRDLGI
>NZ_CP051204.1|WP_168803644.1|2017557_2018217_+|NAD(P)-binding-domain-containing-protein
MRIGILGSGPVGLTLGKGLIQTGHQITIGTRNPAREGVQQWIRQQGQQAAAGTFRQAAEFGELIIICTSWPGTKKAIEAAGIWNFKGKTVVDVTNPVDGKGPDEHGRLNLLIGHTNSAGEQIQAWLPPDAKVVKALSCIGYQHMLSPDFAEGSPTMFIAGNNAEAKQTVVDLLNEFGWKDVADMGHIEMSRSIEPLAVLWTAYGYLHNSSGHAFKLLKK
>NZ_CP051204.1|WP_168860335.1|2018299_2019949_-|M1-family-metallopeptidase
MRGITMFCMALLTAGTVSAQQQFTQADTLRGSITKERAWWDVTSYDLHVQVHLEDSTFSGFNTIAYKVLKPDTVMQIDLQVPMVIDSILQDRQSLAFTRNGNAWLVRMKSPQVKDKTKHLTVFYSGKPHKAKNAPWDGGVVWARDEQQRPWVATAVQHFGASAWWPNKDHQSDEPENMSIHVTVPAEMTDVSNGRLKKKTDNPDGTVTYTWYVSNPINNYDVAINVGHYSEIKDTYSGEGGKLDLSYWVLDYNVDKAKEHFKVVKPMLKCFEYWFGKYPFYKDSYKLVETPFLGMEHQSAVAYGNKFKMGYMGRDLSGTGWGLKWDFLIIHESGHEWFGNSITSKDIADMWIHESFTNYSETLFTQCQYGIKAGEEYVAGIRQIIKNDVPIIGPYGVNTEGSSDMYPKGANMIHNIRLIMNNDEAFRQMLRGLNKTFYHKTVTTQEVERFMSNAAGFDLGRVFDQYLRDTVIPTLEYRIIGQQVQYRWTNCVKDFNMPVRVKLSENGYKLIYPATSWRTASITLPDPNQFEVDKGFYIHVKKREATDNK
>NZ_CP051204.1|WP_168860336.1|2019994_2021638_+|ABC-transporter-substrate-binding-protein
MKSCYCQVVISVLCLLGLCSLLLGSCGQAESHHQQVFRYNQTEGISSLDPAFAKSQAVIWAVSQLYNTLVAPDTNLAIRPSLAKGWQVSDDHRTYTFDLRTDVYFHDSDIFPGGKGRRMTARDVVYSLQRITDPATASPGAWIFNGRIAADSGFRALNDSTFQLTLVRPFHPILGILSMQYCSVVPHEAVEKYGKDFRSHPCGTGPFKFFFWDEGQGLVFHRNPKYFERDAKGHRLPYLDAVQISFLDSKASEFLLFRQGQLDFINDIDASFKDEILTKQGTLKQEWSDKMVLDKKPFLNTEYLGFLVDSNNALVKNAPVRIRKIRQAINYGFDRTKMITYLRNGKGTPASAGFVPAGLPSFDTAKVKGYTYDPGKARQLLAEAGFPGGKGLPVIKLLSIPIYADMADYVANQLQEIGIRLQVEVVQKSLLLEQTAKSQALFFRGSWIADYPDAESYLAMFYSRNPAPPNYTRYANPAFDKLYEQALEENNDSLRYLLYQEMDRRIIADAPVVPLFYDQAMRLVQPHVSGLYNNGMNLLELRFVRKK
>NZ_CP051204.1|WP_168803647.1|2021740_2022514_+|acyl-CoA-desaturase
MTAILIFFCVHWFFSLFFHTFYLHRYASHQMYTTNKFWERFFYFCTWFFQGSSYLIPRAYGVMHRMHHEYSDTEKDPHSPHFFKDVWTMMVQTRKIYNGFVTRTSTVDAVFLEEPLPEWEAMDRFGDSNITRFAWMAIYVAFYVAFVPAGMWYLYLLLPIHFLMGPVQGAIVNWCGHKYGYSNFDNGDKSKNTSPWGIILLGELFQNNHHKFKDSPNFAKKWYELDPSYQVMKLFNVLGIIKLKPAMVTPAAMKKAA
>NZ_CP051204.1|WP_168811714.1|2022640_2023531_+|decaprenyl-phosphate-phosphoribosyltransferase
MMKYIKLLRPAHWAKNTFLFIPLFFAGEIFNVAKVLELLLAFMAFSITASSIYVINDYQDIEADRQHPVKCKRPLASGEISRPAGLIIFIGCLAVGGALAWMVGAKFAFVLGIYFLMNLFYSFGLKNISILDIIILAIGFVLRVKAGGIAGGIAISEWLMVMIFLLALFMAIAKRRDDVLIRLQSGQEMRKAARGYNPDFLNVMLSLVSAVIIVCYLMYTMAPETQVRFHTYRLYYTTLFVIGGLLRYLQITYVENNTGSPTKILYKDRFIQLTILLWVLSFYVLIYWPTNKVFFE
>NZ_CP051204.1|WP_168860337.1|2023530_2024859_+|FAD-binding-oxidoreductase
MQKRLANWGNYPAIISEESAYTQEEQLRSFVVAHHGFIARGNGRCYGDASLGKHSLSMLKYDKILSFDTVAGVLETQAGVTLDQILDIIVPKGWFLPVTPGTKFITVGGAVASDVHGKNHHMEGAFSGHITEMDVITGDGATITCSPSLHTDLYWATCGGMGLTGVITRVKFGLKKIETAYIKQKQIKARNLEEVIRLFDEYKHYTYSMAWIDCLQKGDSFGRSILIVGEHATKAELNPKQGQAPLQLPAKPRLTVPFNLPSFILNTFTVKAFNWLYYGKNFKKEINNVVPYEPFFYPLDAILHWNRGYGKAGFIQYQFVLPLEQKEGLVAILRRISEKGWGSFLAVLKVFGQQDSLISFPMEGYTLALDFPVRKGLFAFLDELDEIVLQYGGRLYLSKDARMKQEVFWKSYPNARRFAEIVNTYNPGKRFESLQSERLHII
>NZ_CP051204.1|WP_168860338.1|2024957_2025689_+|SDR-family-oxidoreductase
MPTVLLLGAGSDMAVAIARRFAATQYNVQLAGRQPAALQPLQQDLQVRYGITATVHAFDATAYDTHAAFYAALPVQPDITVCAFGYLGDQEQAQENWAETARILDANFTGAVSILNVVANAYEAGKAGTIVGISSVAGERGRQSNYIYGSAKAGFTAYLSGLRNRLFRSGVHVMSVLPGFVNTAMTQHLTLPPLLTAQPELVANAVFKAVQRKKNVLFVKWPWKYIMLIIKLIPEFIFKKLRL

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Crispr_ID: NZ_CP051204_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP051204_4

3532385-3532474

Orphan

Consensus_repeat	Method
CTTAAAGGAGGAGAATGGTTGCTGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP051204_4

>merge|NZ_CP051204|4|3532385-3532474|CRISPRCasFinder
CTTAAAGGAGGAGAATGGTTGCTGTACGTGTAACAGATGCGGATACACTGGAAAAGGTGAAGGGGCTTAAAGAAGGAGAATGGTTGCTGT

>NZ_CP051204|4|4|3532385-3532474|CRISPRCasFinder
CTTAAAGGAGGAGAATGGTTGCTGT	ACGTGTAACAGATGCGGATACACTGGAAAAGGTGAAGGGG
CTTAAAGAAGGAGAATGGTTGCTGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP051204.1\|WP_168804605.1\|3548817_3550089_-\|glucose-1-phosphate-adenylyltransferase	unknown	unknown	gnl\|CDD\|179486
NZ_CP051204.1\|WP_168860867.1\|3547334_3548804_-\|glycosidase	unknown	unknown	gnl\|CDD\|350125
NZ_CP051204.1\|WP_168860864.1\|3525873_3527058_+\|aminofutalosine-synthase-MqnE	unknown	unknown	gnl\|CDD\|213851
NZ_CP051204.1\|WP_168804601.1\|3542255_3544478_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|130728
NZ_CP051204.1\|WP_168804597.1\|3533776_3535042_+\|NupC/NupG-family-nucleoside-CNT-transporter	unknown	unknown	gnl\|CDD\|224883
NZ_CP051204.1\|WP_168860865.1\|3539698_3542098_+\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|379720
NZ_CP051204.1\|WP_168860866.1\|3544564_3546145_-\|bacillithiol-biosynthesis-cysteine-adding-enzyme-BshC	unknown	unknown	gnl\|CDD\|378380
NZ_CP051204.1\|WP_168804589.1\|3523254_3523572_+\|thioredoxin	unknown	unknown	gnl\|CDD\|200072
NZ_CP051204.1\|WP_168804598.1\|3535320_3535719_-\|DUF4259-domain-containing-protein	unknown	unknown	gnl\|CDD\|372905
NZ_CP051204.1\|WP_168860862.1\|3518653_3519319_-\|C40-family-peptidase	unknown	unknown	gnl\|CDD\|366353
NZ_CP051204.1\|WP_168804593.1\|3527730_3528096_-\|transcription-elongation-factor-GreAB	unknown	unknown	gnl\|CDD\|180236
NZ_CP051204.1\|WP_168804592.1\|3527065_3527608_+\|DUF192-domain-containing-protein	unknown	unknown	gnl\|CDD\|376876
NZ_CP051204.1\|WP_168804595.1\|3529947_3532236_-\|c-type-cytochrome	unknown	unknown	gnl\|CDD\|274225
NZ_CP051204.1\|WP_168804596.1\|3532577_3533681_+\|acyltransferase	unknown	unknown	gnl\|CDD\|224748
NZ_CP051204.1\|WP_168804603.1\|3546327_3547332_+\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|340832
NZ_CP051204.1\|WP_168804594.1\|3528111_3529677_-\|FMN-binding-glutamate-synthase-family-protein	unknown	unknown	gnl\|CDD\|239202
NZ_CP051204.1\|WP_168804599.1\|3535804_3539335_-\|chromosome-segregation-protein-SMC	unknown	unknown	gnl\|CDD\|274008
NZ_CP051204.1\|WP_168860861.1\|3517166_3518657_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|240533
NZ_CP051204.1\|WP_168804590.1\|3523735_3525877_+\|T9SS-type-A-sorting-domain-containing-protein	unknown	unknown	gnl\|CDD\|239802
NZ_CP051204.1\|WP_168860863.1\|3519507_3523149_+\|DNA-polymerase-III-subunit-alpha	unknown	unknown	gnl\|CDD\|235554

Protein	Function_ID	Function_description	E-value
NZ_CP051204.1\|WP_168804605.1\|3548817_3550089_-\|glucose-1-phosphate-adenylyltransferase	gnl\|CDD\|179486	PRK02862, glgC, glucose-1-phosphate adenylyltransferase; Provisional.	0
NZ_CP051204.1\|WP_168860867.1\|3547334_3548804_-\|glycosidase	gnl\|CDD\|350125	cd18613, GH130, Glycosyl hydrolase family 130; uncharacterized. This subfamily contains glycosyl hydrolase family 130 (GH130) proteins, as classified by the carbohydrate-active enzymes database (CAZY), most of which are as yet uncharacterized. GH130 enzymes are phosphorylases and hydrolases for beta-mannosides, and include beta-1,4-mannosylglucose phosphorylase (EC 2.4.1.281), beta-1,4-mannooligosaccharide phosphorylase (EC 2.4.1.319), beta-1,4-mannosyl-N-acetyl-glucosamine phosphorylase (EC 2.4.1.320), beta-1,2-mannobiose phosphorylase (EC 2.4.1.-), beta-1,2-oligomannan phosphorylase (EC 2.4.1.-) and beta-1,2-mannosidase (EC 3.2.1.-). They possess 5-bladed beta-propeller domains similar to families 32, 43, 62, 68, 117 (GH32, GH43, GH62, GH68, GH117). GH130 enzymes are involved in the bacterial utilization of mannans or N-linked glycans. Beta-1,4-mannosylglucose phosphorylase is involved in degradation of beta-1,4-D-mannosyl-N-acetyl-D-glucosamine linkages in the core of N-glycans; it produces alpha-mannose 1-phosphate and glucose from 4-O-beta-D-mannosyl-D-glucose and inorganic phosphate, using a critical catalytic Asp as a proton donor.	4.43916e-165
NZ_CP051204.1\|WP_168860864.1\|3525873_3527058_+\|aminofutalosine-synthase-MqnE	gnl\|CDD\|213851	TIGR03700, mena_SCO4494, putative menaquinone biosynthesis radical SAM enzyme, SCO4494 family. Members of this protein family appear to be involved in menaquinone biosynthesis by an alternate pathway via futalosine, based on close phylogenetic correlation with known markers of the futalosine pathway, gene clustering in many organisms, and paralogy with the SCO4550 protein. [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone].	1.05834e-158
NZ_CP051204.1\|WP_168804601.1\|3542255_3544478_+\|hypothetical-protein	gnl\|CDD\|130728	TIGR01667, Uncharacterized_protein_HI_1680, integral membrane protein, YccS/YhfK family. This model represents two clades of putative transmembrane proteins including the E. coli YccS and YhfK proteins. The YccS hypothetical equivalog (TIGR01666) is found in beta and gamma proteobacteria, while the smaller YhfK group is only found in E. coli, Salmonella and Yersinia. TMHMM on the 19 hits to this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane.	2.80505e-66
NZ_CP051204.1\|WP_168804597.1\|3533776_3535042_+\|NupC/NupG-family-nucleoside-CNT-transporter	gnl\|CDD\|224883	COG1972, NupC, Nucleoside permease [Nucleotide transport and metabolism].	7.66526e-120
NZ_CP051204.1\|WP_168860865.1\|3539698_3542098_+\|TonB-dependent-receptor	gnl\|CDD\|379720	pfam14905, OMP_b-brl_3, Outer membrane protein beta-barrel family. This family includes proteins annotated as TonB dependent receptors. But it is also likely to contain other membrane beta barrel proteins of other functions.	1.8992e-78
NZ_CP051204.1\|WP_168860866.1\|3544564_3546145_-\|bacillithiol-biosynthesis-cysteine-adding-enzyme-BshC	gnl\|CDD\|378380	pfam10079, BshC, Bacillithiol biosynthesis BshC. Members of this protein family include BshC, which is an enzyme required for bacillithiol biosynthesis and described as a cysteine-adding enzyme.	0
NZ_CP051204.1\|WP_168804589.1\|3523254_3523572_+\|thioredoxin	gnl\|CDD\|200072	TIGR01068, Thioredoxin-like_protein_slr0233, thioredoxin. Several proteins, such as protein disulfide isomerase, have two or more copies of a domain closely related to thioredoxin. This model is designed to recognize authentic thioredoxin, a small protein that should be hit exactly once by this model. Any protein that hits once with a score greater than the second (per domain) trusted cutoff may be taken as thioredoxin. [Energy metabolism, Electron transport].	2.4861e-46
NZ_CP051204.1\|WP_168804598.1\|3535320_3535719_-\|DUF4259-domain-containing-protein	gnl\|CDD\|372905	pfam14078, DUF4259, Domain of unknown function (DUF4259). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 118 and 145 amino acids in length.	2.09803e-22
NZ_CP051204.1\|WP_168860862.1\|3518653_3519319_-\|C40-family-peptidase	gnl\|CDD\|366353	pfam00877, NLPC_P60, NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins.	2.89558e-32
NZ_CP051204.1\|WP_168804593.1\|3527730_3528096_-\|transcription-elongation-factor-GreAB	gnl\|CDD\|180236	PRK05753, PRK05753, nucleoside diphosphate kinase regulator; Provisional.	1.27491e-32
NZ_CP051204.1\|WP_168804592.1\|3527065_3527608_+\|DUF192-domain-containing-protein	gnl\|CDD\|376876	pfam02643, DUF192, Uncharacterized ACR, COG1430. Two structures have been solved for members of this large (>500 members) family of bacterial proteins present mostly in environmental bacteria and metagenomes (distant homologs are also present in several Plasmodium species). TOPSAN analysis for Structure 3pjy shows that there is much similarity with the other solved structure, Structure 3m7a, solved for UniProt:Q2GA55 (Saro_0823), a homolog of Thermotoga maritima TM1668, UniProt:Q9X1Z6., The homolog in Caulobacter crescentus (CC1388), UniProt:Q9A8G6, is associated with CspD, a cold shock protein (CC1387), UniProt:Q9A8G7. However, the genomic context of UniProt:Q2GA55 is most conserved with a putative xylose isomerase, suggesting a possible role in extracellular sugar processing. Saro_0821, UniProt:Q2GA57, is annotated as an AMP-dependent synthetase and ligase. Structure 3m7a structure corresponds to the C-terminal (27-165) fragment of the YP_496102 (Saro_0823) protein and it is structurally unique, as the best hits from Dali have a Z-score of 3.8 (1nt0, 2j1t, 3kq4) and it is thus a likely candidate for a new fold. Interestingly, many of the top Dali hits are involved in sugar metabolism. There are no obvious active site-like cavities on the protein surface of 3m7a (http://www.topsan.org/Proteins/JCSG/).	1.30871e-47
NZ_CP051204.1\|WP_168804595.1\|3529947_3532236_-\|c-type-cytochrome	gnl\|CDD\|274225	TIGR02604, Piru_Ver_Nterm, putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) (SP\|Q44091) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.	1.8159e-55
NZ_CP051204.1\|WP_168804596.1\|3532577_3533681_+\|acyltransferase	gnl\|CDD\|224748	COG1835, COG1835, Predicted acyltransferases [Lipid metabolism].	2.36858e-25
NZ_CP051204.1\|WP_168804603.1\|3546327_3547332_+\|glycosyltransferase-family-4-protein	gnl\|CDD\|340832	cd03802, GT4_AviGT4-like, UDP-Glc:tetrahydrobiopterin alpha-glucosyltransferase and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.	1.41922e-128
NZ_CP051204.1\|WP_168804594.1\|3528111_3529677_-\|FMN-binding-glutamate-synthase-family-protein	gnl\|CDD\|239202	cd02808, GltS_FMN, Glutamate synthase (GltS) FMN-binding domain. GltS is a complex iron-sulfur flavoprotein that catalyzes the reductive synthesis of L-glutamate from 2-oxoglutarate and L-glutamine via intramolecular channelling of ammonia, a reaction in the plant, yeast and bacterial pathway for ammonia assimilation. It is a multifunctional enzyme that functions through three distinct active centers, carrying out L-glutamine hydrolysis, conversion of 2-oxoglutarate into L-glutamate, and electron uptake from an electron donor.	1.12675e-167
NZ_CP051204.1\|WP_168804599.1\|3535804_3539335_-\|chromosome-segregation-protein-SMC	gnl\|CDD\|274008	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins].	0
NZ_CP051204.1\|WP_168860861.1\|3517166_3518657_+\|hypothetical-protein	gnl\|CDD\|240533	cd13128, MATE_Wzx_like, Wzx, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins. Escherichia coli Wzx and related proteins from other gram-negative bacteria are thought to act as flippases, assisting in the membrane translocation of lipopolysaccharides including those containing O-antigens. Proteins from the MATE family are involved in exporting metabolites across the cell membrane and are often responsible for multidrug resistance (MDR).	2.62931e-13
NZ_CP051204.1\|WP_168804590.1\|3523735_3525877_+\|T9SS-type-A-sorting-domain-containing-protein	gnl\|CDD\|239802	cd04275, ZnMc_pappalysin_like, Zinc-dependent metalloprotease, pappalysin_like subfamily. The pregnancy-associated plasma protein A (PAPP-A or pappalysin-1) cleaves insulin-like growth factor-binding proteins 4 and 5, thereby promoting cell growth by releasing bound growth factor. This model includes pappalysins and related metalloprotease domains from all three kingdoms of life. The three-dimensional structure of an archaeal representative, ulilysin, has been solved.	2.09727e-52
NZ_CP051204.1\|WP_168860863.1\|3519507_3523149_+\|DNA-polymerase-III-subunit-alpha	gnl\|CDD\|235554	PRK05673, dnaE, DNA polymerase III subunit alpha; Validated.	0

>NZ_CP051204.1|WP_168804595.1|3529947_3532236_-|c-type-cytochrome
MGRLQYLIISTISLAWFACGQTQQQDHLSKREKDSLAMRKQYARSPVLDGKAAIGAMTVDKGLEVQLVAAEPMVFAPVSTVFDDRGRMWVVEMMGFMPDTSGTGEDLPDGKIVILEDTTGDGVMDKRTVFLDSLVLPRAVCLVENGVLVATPPQLWFIENNNDKPGKKVLVDSMYAAGGNVEHQPNGLLRGLDNWIYNAKSDRRYRKVGDKWLKEATTFRGQWGITQDDKGRLYYNNNSENLLGDYFPAGLGGKNPHQQNAAGYDQKIVRDNHVYPAHPTPGVNRGYMKGILDDSLRLVEFTAACGPVIYRGNLLPAGYAGNAFVAEPSANLIKRNVLRDSGFIVTGQQAYKGKEFLASTDERFRPTGLYNGPDGALYITDMYRGILQHKTYLTSYLKNEIKMRELTQPLSCGRIYRIVPAGQQPKKTLVQEEAVLQLLNHPNGALRDKAQQYIIDHRLTALVPELRAALAGNATPLLQVHALWTLEGLHQLTYADLATILEQGNDAYKVQALAALPSVLDGKSAKAAAARLDTLADKPFFAPYVAYLLPALSRTDKAAAGRLENKLMKAYARDRYTSAALINNAVNREAALLKQLEAFNPDTTLALNKQLHAVLKNMDNTANAQKMDALAAKYPRGYKIFNTVCQTCHGKNGNGIASMAPPLNESNWVTGDKSKFAAIVLYGLTGPVEVHGKLYKAPEINGDMPGIGVSDEFSDGDIAELLTFLRSAWNNKAGKVTADDIKNVRKQYNGRQKPFTAAELTK
>NZ_CP051204.1|WP_168804594.1|3528111_3529677_-|FMN-binding-glutamate-synthase-family-protein
MNHRIARWAVYLLCLLLDVSVAASLYRGYLTGWILLPVAVGVTLLTLIDRFQGKHALLRNYPLLGRLRYLLEHIRPEMRQYFFESDTDGRPFSRRQRAVVYQRAKDVKQTVAFGALADMYEPGYEWASHTAFPTKVKPEALRVTIGNKQCSQPYNASLLNISAMSYGALSKTAILSLNGGAKVGGFAHNTGEGGVSPYHLQHGGDLIWQIGTGYFGCRDENGNFSPEVYAGTVAEPSVKMVELKLSQGAKPGKGGVLPAAKNTPEIAAIRKVKPGVSVLSPAAHTAFGNEYEMLTFLQQLRTLSGGKPVGFKLCVGRKDEFERICIAMTNTGIYPDFITVDGAEGGTGAAPLEFTDSIGMPLYDALAFVVNMLKKYDLKQHIRIMASGKIITGFDIMKVLALGADACYSARGMMLALGCIQALQCDSGSCPVGVATQDPTLYQGVNVTDKKERVANFHRNTIYALAELMGACGFAAPEQVNPAALYRRVTRTDIRSYEEIYAPDNGRSAGAALLPGQAVNN
>NZ_CP051204.1|WP_168804593.1|3527730_3528096_-|transcription-elongation-factor-GreAB
MKKKQIIVSQHDYDILKTLCYHAPGTAKLKEELDRAVIRKTKVPDDVVQVNSTLQFRDERSGAVREVQLVLPAASNIQLGKLSILSPIGTALLGYSAGDTIDWEVPAGKTQLHILRVVNEG
>NZ_CP051204.1|WP_168804592.1|3527065_3527608_+|DUF192-domain-containing-protein
MQLPFKYLLIAALYVSGCNNNTGKNNSAATTETGTGTTAGTESPAPVTANGSEFRKDASLAFLSKSKADTIRKIDIQLAQTDQQREDGLMYRKSMTDDQGMLFIFPDMEERSFWMKNTYISLDIIYLDDKLEIVSIQKYATPLSEQSLPSFKKAQYVLEVNGGFCDKYHINYGDHVVYHK
>NZ_CP051204.1|WP_168860864.1|3525873_3527058_+|aminofutalosine-synthase-MqnE
MTMRQDYPAVQTLLQQPSLDTDLKNIAEKILRQERITPAEGLTLFEKGDVGFLGALANHVRERMHGDKTYFNRNFHIEPTNVCVFTCHFCSYSRLYKNREEGWELSIDQMLDIVKSYDGQPVTEVHIVGGVHPKMQLDFFVELIQKIKAHRPDLHIKGFTAVELDYMFRKAKVSVDEGMRILNEAGLQSMPGGGAEIFHPDVRAKICHDKVDADGWLAIHRAAHNRGMVTNATMLYGHIETYEHRIDHMERLRQLQDETHGFNTFIPLKFRNKGNDMSDIPESSIVEDLKLYAVARLYMDNFPHIKAYWPMLGRNTAQLTLSFGVNDLDGTIDDTTKIYSMAGAEEQNPSMNTAQLAHLIKQAGRRPVERDTVYNEIKDYTDVVFSDEELLVTK
>NZ_CP051204.1|WP_168804590.1|3523735_3525877_+|T9SS-type-A-sorting-domain-containing-protein
MRHYFIILFTLLYSVAATGQRKCGTAVALQQRVLQHPSLQQVIDNNEKKMQLWQQRRMMRVQTEAVPQNVTIPVVVHIVLDNPDLVTDAQVLSQIAVLNQDYNAANPDISQVPSVWQPVTGNARISFCLAQRTPGDEPTTGIVRVKTTAGRSFDISGGAPDAKYAQYGGSDAWDTRKYLNIWVTRLSGNYLGVAAPPGVGYPVEQEGVVVLYTAFGTTGSVGRIYNLGRTTTHEIGHYFGLRHIWADDSGGCAADDGISDTPPQGDNTYGCPAFPRTDNCSPNFPGIMFMNYMDYTDDACMHLFTAGQTGRIRDVLENTVSSLMSSNGCTPVVLPANDAALTAVTGADGKRCDNRILPQVTLRNKGTLPLTSVRILYRLNNGALVNYNWQGNLSSLQSTNVPLPASQVTTGVYNLQAYTQSPNGQPDANVANDTTTSRFHFDAEVQLPFEEGFEQDSFPPPGWDLYNPDRSFTWERDRNVGHNSQASALVRNKGYNVNDQTDDLLTPVIDPQGHDSIFLFFDVAAAVYSNPDMTGNVWDTLQVLVTKDCRQTAAIAYAKWGKNLITRPTPVLDEFIPSNNEWRRDSVDLTALAGKDKFQVAFRNISNAENNIYIDNIRIVTKDINPELRQAGVLVHPNPTDGLVWISFYERPADLQQVNLYNAAGQLVRSQPGNAIGANNRMTFNLVNEPNGVYFVKLIYRNRANTIKLMKVR
>NZ_CP051204.1|WP_168804589.1|3523254_3523572_+|thioredoxin
MALEFTDANFQTEVLNSDKLTVVDFWAEWCGPCRAIGPVIEELSKDYAGKVNIGKVNVDVNPQISIDYGITSIPAILFIKGGQVVDKQVGAVPKAVLEKKIQANL
>NZ_CP051204.1|WP_168860863.1|3519507_3523149_+|DNA-polymerase-III-subunit-alpha
MIFSHLHVHTQFSLLDGAADIKSLYKKAMASNQPALAITDHGNMFGAFQFVAEAYNNKLNPGDPKDKRLKVKPIVGCEFYLVENRHKRAFTREEKDIRYHQVLLAKDDEGYRNLIKLCSLGYMEGLYGKYPRIDKELILQYHKGLIATTCCLGASVPKTILRKGEEEGEKEFKWWLDIFGDDFYVEMQRHGIPEQDQVNHVLLKYAAKYNVKIIASNDSHYVDQADANAHDILLCINTGEKKSTPTNKEFSDDEAAPKNTRFAFYNDQFYFKTTEEMTALFHDLPQAIDNTNEIVDKVQLLDLKRDILLPNFPIPKEFLTQDQYLRHLTYEGARTRYREMTADIEERINFELQVIENMGFAGYFLIVSDFIKAGRDLGVFIGPGRGSAAGSAVAYCIGITNIDPIKYNLLFERFLNPDRKSMPDIDTDFDDEGRQKVIDYVVQKYGRNQVAQIITYGTMAAKMSIKDVARVMDLPLVESNSLAKLVPEKPGIQLDRIFNAPLEGEKSLADKEGLAGEDIENVKRLRELIKGDDLQGEVLREACVLEGSVRNTGIHAAGIIIAPQDLYDLIPVSTAKDSDLLVTQFEGSIIESAGVIKMDFLGLKTLTIIKGALELIRMNHGVEIEIDNIPLDDAKTYELYQKGETNATFQFESPGMQKYLRELKPDRFDDLIAMNALYRPGPLEYIPSFIRRKHGLEPVTFDLPDMEEHLAETYGICVYQEQVMLLSQKLANFSRGDADILRKAMGKKQIAVLNKMKAQFMEGCATHGYDLKVCEKVWTDWEAFASYAFNKSHATCYAFVAYQTAYLKAHYPSEYMASVLNCASNIEKITFFMEECKRMGIDVLPPDVNESLKGFAVNKQGHIRFGLGGLKGVGEAAVENLLEERKKDGPFKNVFDFIKRVNQRAVNKKSLEALIMSGAFDCFPEFHRAQYFHKPENEPMNGLDRIVKFGQQVSAGSSNIGSLFGDAEMPDVEPPKIPNCDPWPLIMKLNNERDITGIYISGHPLDDYRFELKHYHMNTVQELVEYQSEISTPGSSGGRSRERNFRLAVYVTNAQERISRNNRQFGIMTIEDYSGKFEFALWSEDFIRFAPYLKPGLCLFINGGFKSKRFNDNEYEFKVNSIQLLQEVKKTHTKQVFLATSPKHLNRETVDFLVENVNRFPGSSTLHMQLVDIDDNMQVKLHTFNKNIEMNDELAHFLRKQPDLDVYIEIINK
>NZ_CP051204.1|WP_168860862.1|3518653_3519319_-|C40-family-peptidase
MMRIKGHLWMKLSVCAMALGSCSTIKKSTAKRDHTPTVSESRRITFIDHINTPSRGHSSSGGTKSVSIGKNITYASANLENAQSWQFKYAQLLDVPVENVLNFDLYNFIEEWWGTPYRLGGKTREGIDCSGFVNTLVSSVFQFALTGNSAELYSKVRQHLKGRDLREGDLVFFKIHHKRISHVGIYLDNDKFVHASTSNGVMISDLNEPYWKRYFVGGGRL
>NZ_CP051204.1|WP_168860861.1|3517166_3518657_+|hypothetical-protein
MGIIRKQSFYSSIFIYIGFAFGAVNLIMLMPKIFSREEIGLTRVLIDVSTLLATVASLGAVPVINKFFPFYHDYLKPEKNDLPKLTLIVSLIGYVLFILFTVIFKGLIIRKFSGNSSLFITYFYAIYPLTFFILAYNMLEGFAWGLHKTIASNFLKEGGIRIISTVMLLVFAFAHISFTQYINVFSLPYAVAAIALLVILWRTGQLKLSSGGISNVTRRLGKRMFIFSSYVFSSNVFTLLRKTNDILIISSISGLEHAGLFSYATFVISFMEVPQRSMYAITTPILATAWKNRDMAKIQELYTKSSITLSIAGIGIFGAIWLSVHNLVLYLGPGWDLIVKIIFLLGLAKMIDLVTGINNQIIQTSNYWRFDFVSSIVVVFISFFFNIYLQRRIGTIGAAYADLITVGIFNLARYLFIWIRFGMQPLSLKTLYALLLGVGGVLLVQLLPFMFNMYADTIVRSVLFMGLFGAAVIGTRLSEDVNNAWEIIKGKIGLRY
>NZ_CP051204.1|WP_168804596.1|3532577_3533681_+|acyltransferase
MIFTSSAKPHYEVLDGLRGTAAITIVVFHFLELVWFDYSKNPLGHGFLAVDFFFCLSGFVIGYAYDGRLSGIGYRGFFRGRLLRLHPLVWLGSVLGLLSFLFDPFGGDPYAQGVWPVVAGFICSLFLLPFPWLPGRGGALFPFNSPTWSLFMEYIINIVYAWVLSRLHKGVTLLLTVLAAGWLAVTAWRAGTLIGGWADASIVDGFARVTFSFLAGLSVYRFQWVLRTRAGFVVLSLLLLATFMCPYFRLNWLVEWGIVAVVYPVVIALGAGAVATGWWLQCCRFIGRLSYPLYMTHIFLIWPFGNYYAKYKPGAGQLTLIVTAGTLVLMGIGYVAMRWYDEPLRRWLKGSLRKASAPAGGRPAEVV
>NZ_CP051204.1|WP_168804597.1|3533776_3535042_+|NupC/NupG-family-nucleoside-CNT-transporter
MERFQGLIGIVLILGIAFLFSNNRSKINYRLVLSGITLQVVIALLVFKVPPITWFFQQVGRAMGKLEGFARQGAAFVYGGIGVAQPPTGTLADYASGGFVFAFNVTATIILVCVLVAVLYHFGIMQRVVAVIARAMNVVMRVSGAEALSNVASAFVGQVEAQVMIRPYLNSMTKSEILASMSGSLACIAGGILVVYANMGFQAGMDIAPFLITASLMAAPGALVISKIVFPETEESVTMGRVKMEVKSNYTNVIDAISHGAGDGFKIAMNVIAMLIGFIALIALIDWCLIHLGHLVGLSFDLSLDWIFGKLFTPMAWAMGVPNQDVNNVATLLGQKLTINEFVAFKSMTSHSVKIESVKAITIVTIAIAGFANFSSVGMQIGGIGELAPGRRTDLAKLGLKALLCGTLASYLSATIAGILL
>NZ_CP051204.1|WP_168804598.1|3535320_3535719_-|DUF4259-domain-containing-protein
MGAWGTRNFENDGSQDWIFDVIDSKDGGLVTDTLARIINNTETLETADCEEGLAAAELVAALMGKPSEDFPEDPLEKLDILNLIATKGLRTQAINAVNKITGASEMKNYWEEAGQLEAWAAVQASLMKRLEV
>NZ_CP051204.1|WP_168804599.1|3535804_3539335_-|chromosome-segregation-protein-SMC
MRLKTLEIKGFKSFADKTVLNFDEGITGVIGPNGCGKSNIIDSIRWVIGEHKISNLRSENQSGLVFNGSKTRSASGMAEVSLTFENTKNVLPTEFTTVTITRKFYKNGDSEYRLNDVACRLKDIHNLFMDTGVSTDSYAIIELGMVDDIIRDKENSRRRMLEQAAGISIYKTRKKEAKSKLEATEGDLNRIEDLLFEINNNLKTLEGQARKAERFYEVKKEYREISIELAKAALEGFNVTFRELSDKQQEESDRKLQLETEITTAEAAVEEDKLHFVAKERELQTLQKSFNELVATIRTKENDKNLAAQQLTYLREREKNINDFLNNAEGQLQGLTTSIEFTEKQVVEEAEVFESMEDELETLREMVEEKKERFQQKKLALETLRNDQQRWQRQQFEAEKKVAVADTSVQNLQRGIQQLQEEKNSRLQQITQLEAEKETLQHTIATSKAELDEMVRFQEETKGKILATQSDIEGLRDQLVDENRKLDSKKNEFDLLKSLVDSLEGYPESIKFLKKNPEWNNEAPILSDIFFCKEEYRTCVENLLEPYLNYYVVNNVAEAVQAIRLLDTHKKGKANFFILDQFRIPANGLLAPAGTIPALDVVEIDEKYKGLGYQLLGKVFIGEDITRLEFSQVSDDEICLVEKSGRMHRGKFNITGGSVGLFEGKKLGRAKNLEKLEAEIKELEATVGALRTQIQDKHNQVLGYNSQLNENNINTAREKINQLNNQLFGLQNRIENFHHLIEGGDKRLEEMQQSLTTNQESISGVREELENLNDRVGELQDAITEADRTAQEVEQQFNMANVQFNNQNLQHTRQHSKVQALKQELEFKRKQLTDLHAQITSNKTQLEDAVANIAAAEEKRGAAEEGLVELFRQREEEEKALNEKDQEYYNFRNHLQELETTLRTKQRAREQLEQQLNVIKDKVNELKLQLASMKERLSVEFKVNLDEIIDEQRTSELPLDELQGSAERLKKRLENMGEINPTAIEAYQEMKKRYEFILEQKTDLVNAKDSLLATIQEVETTANQKFLDTFNTVKENFIRVFKALFTEEDQCDMILSDPENLADTGIEIIAKPKGKRPAAITQLSGGEKTLTATALLFAIYLIKPAPFCILDEVDAPLDDANVGKFTNMIRKFSDNSQFIIVTHNKQTMAAVDVIYGVTMQEPGVSKLVPVDFRSLN
>NZ_CP051204.1|WP_168860865.1|3539698_3542098_+|TonB-dependent-receptor
MTQKGIWLLFLLCISVTLQARQQNGIITGQVIDSISGKPVEYATVVLMQAADRKTVAHTLTDNKGDFRFTGVAYGTYQIGITMLGYTPLLLDTLRMDAANAFHRLSPRRLSTTTQQLNAVTVTGKKPLVELQDEKLIYNVENDIDKDNSSASDIMRKIPMLTVDADGTIKLKGQTNYKVLLNGRATSIITRDPKEALKAYPASIIKKIEIITEPSAKYDAEGIGGIINIITQRQVIGYNGSLYTNYNTLGRLSGGGSISARKKKVGITAYAGANSDKSRNSNSILRESFIPGDKGVLTQNSEFERNNQIYYGSLEMTYDIDTANSLTLFGNGSINNMVQRSPQNSLWYDSTGKQVQYGTNNSDSYNKGHGVGVGLDYQHKFRQQGHELTIAANLVSSYGDGYTNNSQRYVPGADSFYRNNSLFTSRVTTAQADYTLPLPHEQLLETGIKGTFQYNKNSATQEIRNKDGNMIPNPIRDNIFNSRQDVLAFYLTYRFKIGAQLSVKPGFRLEQTYQTGDFVSSKTQINTNYLSAIPTVNISWQLKPMTSLSFSYSRRLERPNVFAMNPYVNDNDPYNTFYGNPNLKPSYANSFGIYFNKIMEKVTFNAGLDYTFTNNSIQNIVEVDKEKGITSTTYANIGKSSGTGVSTSMRFALTPKWNVSINGRGGYSNFSDGNTLSSSGFSGSTYLNTDYNIGHGFRADAYGYWYSGSPSVQGSSGSNIGYGCTVRKDFLDGKLSTSLAADQPFRKQRPVISETIDPSFRRVYTSYFPGNSYTISVSWRFGKLTTSATRNKSVVNTGL
>NZ_CP051204.1|WP_168804601.1|3542255_3544478_+|hypothetical-protein
MRIEQRINDIKSFLYSYHFSNGLRTTISVVVPSLIFAAIGQLGLGIAMSMGALCTALSDVPGTIIHKRNGLIISTGLIFLTALGTGLLLPYPTLMAFWIVACCFVFAMMLVYGNRGGNIGTGCLLVLVSILGETRLTPGMAVVYAAMVLLGSIWYALLALILWQIRPYLNVQQALGDCIQQTARYLELRSNFYTPGVDVAANYKAVLAQQVIVNEKQENVRELLLKRRSAQQGTTSINKSMVLIFLDMVDLQEQIMASQTDYNALQRDFRQDDILQKFHALITEFVEELENIGLAVAAGQRSLPKTNLKYEMEKVKQAIADITLKLPTLAERTRTIPLTNILQNLQDMAQRIYNLHRLTRLERLKDETIDPRLELSKFTTSQKYDLETFRDNLTFKSHIFRHAVRVSLATITGYLLGLALHLDRVYWILLTIVVILKPGFGLTRSRSIQRLIGTVLGALFAAGLLYITHNDTVIFISMLLCILGAYSFMSFQYTLSVFFVTPFIIFLLHFLHPADLQNATQRVLDTFIGGGIAFFANMLLWPSWEHNTLPGYMQKMLLSNRKYCELVLRVYAGETNTVTDFKLARKATYVDTANMMAAFQRMLSEPKSKQKNASKVYHFVVLNHTLTSHIAALAAYSMHHGVQFPRPEYREITAYLLRYIDQLYLMLDPATHGQAQLEPAIHAFDTLDEHLHNLVHLRQLEINEGKGATPIRDEMLETKQVHDQLQAMLSLVKDMGKALS
>NZ_CP051204.1|WP_168860866.1|3544564_3546145_-|bacillithiol-biosynthesis-cysteine-adding-enzyme-BshC
MLEYIPYGKTGFFNQLVTDFLADAPQIRPFYTYSSTHPDFTAAIAARKQFNTPRAALVAALQQQYEHLEPVQAVQDNIARLADAQTFTVTTAHQPNVFTGYLYFVYKILQAIKLCRELQQQHPQHQFVPVYYMGSEDADLDELGSIYLEGKTLTWAAGQQGAVGRMRPEGLEQLIGQIKDMLGYAPHAEELIALLRKAYLEHRNIQDATLYLVHALFGRYGLVVLVPDSPALKRLYIPVMKDELFHQASHGIVNKTLEQLGAHYKVQANPREINLFYLKDDMRERIVQEGDQWKVLHTPLKFDAAALEKELEAHPERFSPNVILRGMFQETVLPNIAFIGGGGEIAYWLELKDLFTHYGVPFPVLLLRNSLLLADEQSARRLDKLGITTAELFATTDDIVNAYVKKHTNAALVLKEEYAAIEKLYDSLEAKARSIDITLVASTGAERSRALKSIGKLEHKFLRAEKKKFAWQTDQIKQVKNKLFPGGSLQERKENFMPWYAAEGPAFLDRVLAALTPVTDQFTIVK
>NZ_CP051204.1|WP_168804603.1|3546327_3547332_+|glycosyltransferase-family-4-protein
MKIAILSPVAWRTPPRHYGPWEQMASNLAEGLVARGADVTLFATGDSLTQGKLAWICPQGYEEDRNADAKVNECMHISYLMEQAHHYDIIHNHFDFLPLTYSRLIHTPMVTTIHGFSSEKIVPVYQRYNQVGHYVAISNADRHPRLQYKATVYNGVRPGDFAFNPAPDDYLLYYGRIHPDKGTHDAIKIALQARRRLLIAGIIQQQDYFEEMVKPFIDDEQISYLGSVGGPARSELLGKASALLHPIHFNEPFGLSVAEAMLCGTPVIAFNKGAMPELILDGRTGYLVNTVDEAVAAVEALGQLDRYASHLHAHEHFTTDRMTADYLKVYQSLG
>NZ_CP051204.1|WP_168860867.1|3547334_3548804_-|glycosidase
MRVSIERKPTKIYPDLKRVVARFFFNGEARAKSIIQHVAAMSDEQVDVTITPILREFSRRHRNITRIFEKHADRIRHLFAAVQVNYDELSLKRKLLTGSYFTNEYSIESAAFFNPSLIEDVDQSGLEEGEKRVILSFRAVGEGHISSIAFRSGIIDRNNQITLQAAGNYVDEAEVIRNAMYKKETFFQNAVSIKLPDPVMQEVMNSLSDEFEYMSLKKVIREMQQRYQVDHLVKKALERLLWLADSYYELNFSLDTDISDRVIFPYSDAESRGIEDARFVKYKGEDGDVTYYATYTAFDGITIQPKLLSTEDFYNFKIMPLYGEGAQNKNLALFPRKINGKYVMISRIDGINGYIMYSDKINIWENPQILQTPKYPWEFVQVGNCGSPIETPEGWLVITHGVGPMRTYCIGASLLDLEDPGTEIGRLREPLLMPNKDEREGYVPNVLYSCGSIIHNDELIIPYGLSDYASGFATVNLEKLLAQIKADGV
>NZ_CP051204.1|WP_168804605.1|3548817_3550089_-|glucose-1-phosphate-adenylyltransferase
MTKDVISIILGGGAGTRLYPLTRRRSKPAVPLAGKYRLVDIPISNCLNAELNRIFVLTQFNSASLNKHIKNSYHFSHFDKGFVDILAAEQTPDNPTWYQGTADAVRQCLHHVENFDFKYVLILSGDQLYQMDFRDMINHHIETGAEISIATIPVAAKEASDFGILKTDASGAIVSFTEKPSQDVLPPWASEVSDEMKNAGRVYLASMGIYIFSRDVLFDMLGKQPEAADFGKQVIPEAIEAKARVFSYQYEGYWTDIGNISSFWEANIGLTDDIPQFNLFNESQTIYSRARMLPPAKISGTMEKTIIADGCIIMASRLERCVVGIRTRIGRGSVVSNTYIMGSDYYQTLDELDRASAEGRPPMGIGENCVIDKAIIDKNCSIGNNVHIQGGDHLPDGDFEKYTVKDGIVVVKKGVVLPDGFNI

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Crispr_ID: NZ_CP051204_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP051204_5

3861778-3861876

Orphan

Consensus_repeat	Method
ATTTATTTAAAAGTATCAATGTTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP051204_5

>merge|NZ_CP051204|5|3861778-3861876|CRISPRCasFinder
ATTTATTTAAAAGTATCAATGTTTACCGGTAAAAAAATAGAGATGCCCGTCTCTATATTGTTCTACCGGATATTTATTTATTTAAAACTATCAATGTTT

>NZ_CP051204|5|5|3861778-3861876|CRISPRCasFinder
ATTTATTTAAAAGTATCAATGTTT	ACCGGTAAAAAAATAGAGATGCCCGTCTCTATATTGTTCTACCGGATATTT
ATTTATTTAAAACTATCAATGTTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP051204.1\|WP_168860958.1\|3854465_3855377_-\|EamA-family-transporter	unknown	unknown	gnl\|CDD\|183067
NZ_CP051204.1\|WP_168860960.1\|3857014_3857476_+\|IS200/IS605-family-transposase	unknown	unknown	gnl\|CDD\|376616
NZ_CP051204.1\|WP_168804930.1\|3857741_3858221_-\|methylated-DNA--[protein]-cysteine-S-methyltransferase	unknown	unknown	gnl\|CDD\|234860
NZ_CP051204.1\|WP_168804921.1\|3853277_3853838_-\|NUDIX-hydrolase	unknown	unknown	gnl\|CDD\|239516
NZ_CP051204.1\|WP_168860957.1\|3853899_3854340_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP051204.1\|WP_168804935.1\|3860985_3861747_-\|glucose-1-dehydrogenase	unknown	unknown	gnl\|CDD\|235816
NZ_CP051204.1\|WP_168860964.1\|3864373_3864829_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051204.1\|WP_168862404.1\|3866882_3867773_-\|class-A-beta-lactamase,-subclass-A2	unknown	unknown	gnl\|CDD\|379138
NZ_CP051204.1\|WP_168860966.1\|3866739_3866907_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223715
NZ_CP051204.1\|WP_168804941.1\|3864921_3865785_+\|NmrA-family-NAD(P)-binding-protein	unknown	unknown	gnl\|CDD\|187542
NZ_CP051204.1\|WP_168860959.1\|3855369_3856785_-\|aspartate-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|99743
NZ_CP051204.1\|WP_168860965.1\|3865790_3866720_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|378964
NZ_CP051204.1\|WP_168804931.1\|3858222_3859140_-\|DNA-3-methyladenine-glycosylase-2-family-protein	unknown	unknown	gnl\|CDD\|223200
NZ_CP051204.1\|WP_168804933.1\|3859366_3860797_+\|PLP-dependent-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|224089
NZ_CP051204.1\|WP_168860963.1\|3863201_3864290_+\|alkene-reductase	unknown	unknown	gnl\|CDD\|239243
NZ_CP051204.1\|WP_168860956.1\|3852445_3853252_-\|23S-rRNA-(guanosine(2251)-2'-O)-methyltransferase-RlmB	unknown	unknown	gnl\|CDD\|223640
NZ_CP051204.1\|WP_168860962.1\|3862236_3863115_-\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NZ_CP051204.1\|WP_168804945.1\|3867950_3868985_+\|glutamate-5-kinase	unknown	unknown	gnl\|CDD\|235460
NZ_CP051204.1\|WP_168862405.1\|3868995_3870243_+\|glutamate-5-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|234685
NZ_CP051204.1\|WP_168860961.1\|3861900_3862170_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|378968

Protein	Function_ID	Function_description	E-value
NZ_CP051204.1\|WP_168860958.1\|3854465_3855377_-\|EamA-family-transporter	gnl\|CDD\|183067	PRK11272, PRK11272, putative DMT superfamily transporter inner membrane protein; Provisional.	1.51562e-50
NZ_CP051204.1\|WP_168860960.1\|3857014_3857476_+\|IS200/IS605-family-transposase	gnl\|CDD\|376616	pfam01797, Y1_Tnp, Transposase IS200 like. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases for IS200 from E. coli.	1.89625e-27
NZ_CP051204.1\|WP_168804930.1\|3857741_3858221_-\|methylated-DNA--[protein]-cysteine-S-methyltransferase	gnl\|CDD\|234860	PRK00901, PRK00901, methylated-DNA--protein-cysteine methyltransferase; Provisional.	6.16279e-55
NZ_CP051204.1\|WP_168804921.1\|3853277_3853838_-\|NUDIX-hydrolase	gnl\|CDD\|239516	cd03424, ADPRase_NUDT5, ADP-ribose pyrophosphatase (ADPRase) catalyzes the hydrolysis of ADP-ribose and a variety of additional ADP-sugar conjugates to AMP and ribose-5-phosphate. Like other members of the Nudix hydrolase superfamily, it requires a divalent cation, such as Mg2+, for its activity. It also contains a highly conserved 23-residue Nudix motif (GX5EX7REUXEEXGU, where U = I, L or V) which functions as a metal binding site/catalytic site. In addition to the Nudix motif, there are additional conserved amino acid residues, distal from the signature sequence, that correlate with substrate specificity. In humans, there are four distinct ADPRase activities, three putative cytosolic enzymes (ADPRase-I, -II, and -Mn) and a single mitochondrial enzyme (ADPRase-m). Human ADPRase-II is also referred to as NUDT5. It lacks the N-terminal target sequence unique to mitochondrial ADPRase. The different cytosolic types are distinguished by their specificities for substrate and specific requirement for metal ions. NUDT5 forms a homodimer.	7.92325e-38
NZ_CP051204.1\|WP_168860957.1\|3853899_3854340_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	8.83846e-16
NZ_CP051204.1\|WP_168804935.1\|3860985_3861747_-\|glucose-1-dehydrogenase	gnl\|CDD\|235816	PRK06500, PRK06500, SDR family oxidoreductase.	4.72382e-96
NZ_CP051204.1\|WP_168862404.1\|3866882_3867773_-\|class-A-beta-lactamase,-subclass-A2	gnl\|CDD\|379138	pfam13354, Beta-lactamase2, Beta-lactamase enzyme family. This family is closely related to Beta-lactamase, pfam00144, the serine beta-lactamase-like superfamily, which contains the distantly related pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	3.68964e-34
NZ_CP051204.1\|WP_168860966.1\|3866739_3866907_-\|hypothetical-protein	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	1.7029e-10
NZ_CP051204.1\|WP_168804941.1\|3864921_3865785_+\|NmrA-family-NAD(P)-binding-protein	gnl\|CDD\|187542	cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcriptional regulator) and triphenylmethane reductase (TMR) like proteins, subgroup 1, atypical (a) SDRs. Atypical SDRs related to NMRa, TMR, and HSCARG (an NADPH sensor). This subgroup resembles the SDRs and has a partially conserved characteristic [ST]GXXGXXG NAD-binding motif, but lacks the conserved active site residues. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	2.10751e-40
NZ_CP051204.1\|WP_168860959.1\|3855369_3856785_-\|aspartate-aminotransferase-family-protein	gnl\|CDD\|99743	cd06450, DOPA_deC_like, DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.	1.60115e-60
NZ_CP051204.1\|WP_168860965.1\|3865790_3866720_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|378964	pfam12833, HTH_18, Helix-turn-helix domain.	9.61547e-21
NZ_CP051204.1\|WP_168804931.1\|3858222_3859140_-\|DNA-3-methyladenine-glycosylase-2-family-protein	gnl\|CDD\|223200	COG0122, AlkA, 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase [DNA replication, recombination, and repair].	4.23864e-48
NZ_CP051204.1\|WP_168804933.1\|3859366_3860797_+\|PLP-dependent-aminotransferase-family-protein	gnl\|CDD\|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	1.87299e-121
NZ_CP051204.1\|WP_168860963.1\|3863201_3864290_+\|alkene-reductase	gnl\|CDD\|239243	cd02933, OYE_like_FMN, Old yellow enzyme (OYE)-like FMN binding domain. OYE was the first flavin-dependent enzyme identified, however its true physiological role remains elusive to this day. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Members of OYE family include 12-oxophytodienoate reductase, pentaerythritol tetranitrate reductase, morphinone reductase, and related enzymes.	2.32795e-162
NZ_CP051204.1\|WP_168860956.1\|3852445_3853252_-\|23S-rRNA-(guanosine(2251)-2'-O)-methyltransferase-RlmB	gnl\|CDD\|223640	COG0566, SpoU, rRNA methylases [Translation, ribosomal structure and biogenesis].	8.40051e-66
NZ_CP051204.1\|WP_168860962.1\|3862236_3863115_-\|AraC-family-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	2.66338e-21
NZ_CP051204.1\|WP_168804945.1\|3867950_3868985_+\|glutamate-5-kinase	gnl\|CDD\|235460	PRK05429, PRK05429, gamma-glutamyl kinase; Provisional.	4.35384e-98
NZ_CP051204.1\|WP_168862405.1\|3868995_3870243_+\|glutamate-5-semialdehyde-dehydrogenase	gnl\|CDD\|234685	PRK00197, proA, gamma-glutamyl phosphate reductase; Provisional.	0
NZ_CP051204.1\|WP_168860961.1\|3861900_3862170_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|378968	pfam12840, HTH_20, Helix-turn-helix domain. This domain represents a DNA-binding Helix-turn-helix domain found in transcriptional regulatory proteins.	1.15178e-09

>NZ_CP051204.1|WP_168804935.1|3860985_3861747_-|glucose-1-dehydrogenase
MDQLRNKTAIITGGNSGIGYATATEFLAKGARVLITGRNPGAVQRAVHALGFPAEGLTADQSKLEDTKKLAEYVRSRYGKIDILFINAGIAKFAPFEGVTTEMFDEIIDINFKGAFFTAQQLLPLLNDGGSIVFLSAINAYAGMPGTTVLAASKAALNATARTLARELAPRKIRVNVINAGPVDTPLIEKIGVSHEEAGAIRSKMTASIPLGRLGEATEVASLVSFLVSDEARFITGGEYTIDGGLMVHPGIS
>NZ_CP051204.1|WP_168804933.1|3859366_3860797_+|PLP-dependent-aminotransferase-family-protein
MIKTADHLYLQVADKIEQMIEKDVMKMGEKLPSVRMLSKQQGISLTTAFQAYYHLEGKGLIESRPKSGYYICRNSRRMAPMPGTCAPVRKPASDVTVSDMVMEVFSHITNDNILKFSVAALPVSVLPAAKMAKAVIHTMRDQGPGGIGYEPLQGNELLRNQIARLSLGWGEVYTADDVVTTHGCMDALTLCLTATTQPGDTIALESPSYYGALQLAEGLGLKVLEVPTNPITGVDLDYLDKAIPRHKIKACLFVTNFNNPLGCCMPDKHKQELVKIVEKYDIALIEDDIYGDLYFGKQRPLTCKAFDTQGNVLLCNSLSKSVAPGYRVGWTMPGKYKEKVLRLKHHHAISCTSLTHAAAGHFLEIGRYDFHLRNLRKMLHTQSLRYAQAICEYFPESARVTRPQGGCVLWVELEDHVNTFELFQQTLKHKIAFCPGRLFSLQNRYNNCLRISYGNPWSKQVEDGLKTIGKLIHKMR
>NZ_CP051204.1|WP_168804931.1|3858222_3859140_-|DNA-3-methyladenine-glycosylase-2-family-protein
MIRQKIKIPVNDPANFSFRECLHFLGRSDKECLHYIVDGKLRRMLLAGGEPVVVEIASGDDAAYLEATVLAPGDMLFPEKDIQDFVTRWLHLDADLRDFYAYTQTDPLLRGLADEYRGLRLVGMPDLFEAVTWPIIGQQINLSFAYTLRQRLIHHFGYHQQVDGTDYYLYPHPAVIASLSPEALTPMQFSRSKALYLIETAKAMAAGQLSEQVLAPLDYAAARDRLVAMKGIGNWSANYTLMKYSRFPQAVLLEDVGLQNAVRQRLQLPAKPSMAALQEYARPWQQHAAYAIFYLWRSLLSPLND
>NZ_CP051204.1|WP_168804930.1|3857741_3858221_-|methylated-DNA--[protein]-cysteine-S-methyltransferase
MELAHLRIDTPVGPLLISGTDEYIQAVNFTEEPETAFPPPPQLLLQCAQQLQEYFAGDRKVFELPIRQPGTDFQQTVWEQLTRIPFGQTISYLQLAHRIGNPKSIRAVGTTNGKNQLAIIVPCHRVIGANGMLVGYAGGLWRKRWLLEHERLDLFSGLV
>NZ_CP051204.1|WP_168860960.1|3857014_3857476_+|IS200/IS605-family-transposase
MSHCFTQLHLQIVFAVKYRAALIAPGFRQDLYKYMAGIINNRSHSCLIINGISDHVHILVRMSPAESIASLTQTIKCNSSRWINDHQPLPRIFRWQEGYGAFSYSKSHVPKVVRYIENQEQHHRQRTFQEEYQNMINRYKNHTETPHPFLPLI
>NZ_CP051204.1|WP_168860959.1|3855369_3856785_-|aspartate-aminotransferase-family-protein
MMKLQEDLKHTDRLLQLTKEFSSKFLSSLDRLAADKIIDMPVRQTLPEEGVGGVAALELFRQQYGNVITASAGPRYWGFVTGGVTPAALMGDWLAATMDLNASDKGSAAFAIETETIALLKQLFGLPEAFLGCFVTGATMANLTGLALGRQWLGQQRGIDIGKQGIAGLQDLQVVSCVPHSSITKSMAVLGLGRDNVVKIPALPGRESVDIEALRIYLESRKGQPVIYVASAGTVNTVDFDDIAAIVELKKQYAFWLHIDAAFGGFAACSEHHRHLLHGWEDADSITIDAHKWLNVPYDAAMIFSRHPGLQVEVFQNAGAAYLGDPAENFNYINYVPENSRRMRALPAWFTLLAYGKDGYRHIVEENVALAQRLGDLLEKDPAFRLLAPVRMCVACFTLNVPEEEQEAAVNRFLQALNASGVVCMTRTVYAGQPAVRAALVNWRTTANDVQLAYQTMKEVAVTVLNQHTYA
>NZ_CP051204.1|WP_168860958.1|3854465_3855377_-|EamA-family-transporter
MRKPSTNAYIALAIVSIFWGTTYLASRIGVRHIHGIMLAGLRQSTAGLLLTGFFLLKGYKLPEKIVLSKLFVMGLLMLVGSNGLMTWAMQYIPSGLGAVISATVPIWITIFSYFLVKKTRISIQLLVGMLLGFAGVAGIFYNYLSSLMNPDFRFGIMLSVFACICWALGSVLTAKWALGVNYLFGAGFQMLFSGIVMLLIATLFMGQQLDAGTFTTELWESLLYLILVGSILSYSAYVFTLNNLPPSLASVYAYINPIVAVLLGWVLLKENLTWLMGLCSLVTVGGVYLVNDAVNKNKQKQLQ
>NZ_CP051204.1|WP_168860957.1|3853899_3854340_-|GNAT-family-N-acetyltransferase
MEVVQATAMHTNEVAVLFDAYRSYFDQAPDFKGALAFISDRIKQQDSVIYIAFDKDEIVGFAQLYPLFTSLGMKRGWLLNDVYVLDEHRGKGAGGALVDAAVEHGRKTDAAWVMLQTYVANTGAQKLYQSKGFRKDTNSFYYYLAI
>NZ_CP051204.1|WP_168804921.1|3853277_3853838_-|NUDIX-hydrolase
MTEYDNPWTIHSSEVRYDNNWIQVVHHEGLNPAGGPGIYGVVHFKNLAIGVIALDDQQNTYLVGQYRFPLKKFSWEIPEGGGPLGEVPLETAKRELLEETGLVANRWDVICELAVSNSVTDETGVVFLARELEQRTAEPEDTEELFVKKLPFEEVYQMVKNYDITDSISVVAIQKIKLMMLEGELD
>NZ_CP051204.1|WP_168860956.1|3852445_3853252_-|23S-rRNA-(guanosine(2251)-2'-O)-methyltransferase-RlmB
MERKFNAFKGERRPGGPKRPASPRPKQSSLIIGRQPVMEALSSGKPIERIYMLRSATGDIIPQIKEKAALGNIPINVVPVEKLNGLTQANHQGVIALTGQVSYLDLQDVISHVIDQGETPLFLILDGITDVRNIGAIARSAVCCGAQAIIIPDKGIAALNEEAMKSSAGALEKIAICRVNSLLKAIDTLHLNGIKVLSSEMETEIKLYDCDLREPVAVIMGSEDKGVYPALIKASDVLFRIPMAGNFESFNVSVAAGIILYEAMKQRS
>NZ_CP051204.1|WP_168860961.1|3861900_3862170_-|helix-turn-helix-transcriptional-regulator
MDVGIIEKAANAIADKHRLSIIMEIVQKGSIVCGDVCCLCSLSQPTVSHHVKILVDSGVLNSVKNGRIVELTINKEMMKQLSLFFLQLS
>NZ_CP051204.1|WP_168860962.1|3862236_3863115_-|AraC-family-transcriptional-regulator
MGERNLHMPFELFEADMSEWESRPLVYYFFEIIHIWEGEGTRVVNQNRFPYKPGSVILFTPRDCRGFEVTKPTRFTSVRFSGSFLEKQHSGEERRRICQWLKQLEYVFFQHNRHEPVLIKHTDDCKMITSLIRNMVQEYQQRPPYYETNLQLYVALLLNIIARNVAEEVDMAEPEGEGPLIGRIISHIRQHIYYPDQLKLEVLAAKFNLSVNYIGEFFKKRTGESIQQFMISYKLKLVQLRMENSGLTIGEIADELGFTDESHLSRLFRKYYGVSPATYRRNKLAEKAGTTA
>NZ_CP051204.1|WP_168860963.1|3863201_3864290_+|alkene-reductase
MKLLEPIATPGLSLANRVVMAPMSRRRVENEGVPSGLLARYYAQRASAGLIIAESTVVSRDGMGISLLPGIYSEEQVAGWRKVTEAVHRQGGKIFVQLVHSGRIGHALNIPGATGPVAPSAIAAAGTINTPAGAQPLPVPKALSAEAVEAMYELHMQATRNALAAGFDGVELHAAHGYLMEQFIHPAANQRTDEYGGSIENRCRLPLRVLEGMVAIAGADRVGVRFSPFASLNGLSPYEEEAATHLYLAAKLDKMKIRYIHLSDQSSNGYTPIPPAFITLLRQAFRQWLILAGGYNACTATQALQQFDADLIAFGRPFISNPDLVARIAQQQPFAPADKATFYEGGANGLIDYPCLSACATS
>NZ_CP051204.1|WP_168860964.1|3864373_3864829_+|hypothetical-protein
MYRLKNRCLLPVALLALMACHQTPDTSESTDAAPPAHTVVNVITEPCAVIYTPGTHKLEKLKEENGEESFYALSSDSENCISDCQDFLQNKAFKTTTADGGKITFRHQNGDTTVINLDDPQYTWEVFLFDGKKVTNIDITDIESEYDKVFI
>NZ_CP051204.1|WP_168804941.1|3864921_3865785_+|NmrA-family-NAD(P)-binding-protein
MKIVLTGSLGNISKPLTEILVKEGHQVTLISTDPAKRDKIEALGAQPAIGSIHDLPFLIRTFTGADVVYCMNPLDFATQDIREWDENMDRYSQAIKATGVKRAIVLSGWVAHLLQDLHPEKKFEALNDVSVTFVRPGPFYTNFYHLAGMIRYQGAITSNYGGDDVVAFVAPEDIAAAIAEEIGRPAMTGRKALYVVSDELTCTQAAQIIGEAIGVPGLQWTVTSGEAVKQGLQAHGVSPAVAGLMAEMQENMHNGKAQRDYALHQPVAGKRKLRDFAREYAVWYHQN
>NZ_CP051204.1|WP_168860965.1|3865790_3866720_+|AraC-family-transcriptional-regulator
MAGNLPLKIRSVQELLQLRGLPDTKHPLVSLINISALPHPPKPLDLSVTTDLYFIGISPSTQACLKMKYGQQAYDFDKGMMKFIAPGRVFSFNPDQAEEITLSGWLLLLHPDFLWNHPLGQKIKQYEFFDYAVNEALFLSDGEEKIINGLFQHIEQEYNNCIDKFSQGIIISLIESLLGYSERFYQRQFITREITHHGMVSQLETLLEKAFSPEMLKEQGVPTVKDISAQLNISPNYLSTLLKTLTGNSTQQHIQEKIIEKAKEKLMRTDLSVNEIAFELGFEYPQSFSKLFKTKTQLSPLEFRKSGRF
>NZ_CP051204.1|WP_168860966.1|3866739_3866907_-|hypothetical-protein
MGPFCAGLINGRPYAGGNGIGLSLALKIVRLHKGNISVVSQSGHGTTFTAELPHV
>NZ_CP051204.1|WP_168862404.1|3866882_3867773_-|class-A-beta-lactamase,-subclass-A2
MRPLYSLAIVLLYPLVAVTQQKAPLSQQFETIARAAKGTVGVSALVLETGETAVLNSKMRFPMQSVYKFPIAMAVLQQVDKGKLKLDQPIRVLPSDYIPQQGHSPLRDEYPDGNVDVTVAELLRYNVAESDGSACDVLLRIIGGTSVADKYVHDLGIKNIRIALTEQVQVPNELMQYRNWSTPEAMTALFKKFYTGHVLSDSSYNFLLDLLINSGPGARRLKAQLPKGTVVAHKTGTSGTVNGLTRATNDAGIITLPDGHHLIITVFVKDAYADQETREKTIANTAKAAWDHFVQD
>NZ_CP051204.1|WP_168804945.1|3867950_3868985_+|glutamate-5-kinase
MSKPILVIKFGTASITHANGDLDETVIAGVARQVAELHGQYHIVLVSSGAVAAGKQYLKAYEGTISQRKAAAAIGNPLLLSKYSRYFAPYNIAVAQSLCERQHFSNRDQFLQLKRTYEELWASNIIPIANENDVVSSLELKFSDNDELATLIAVGFGASLLLFSTSVAGVLDREGKVVPQIDVIDKTALSLADKEKSALGLGGMVSKLTFARLATRMGIRVVIFGIRTDDGILNAIAGKTGTLCLPQACSMPARRKWLASGSLVTGRIQIDAGAQQALEKRHSLLAVGVKEVQEKFECGEVIEIVNEENIAIAVGRARISSDILETNQKAQNTEVAHADDIVLL
>NZ_CP051204.1|WP_168862405.1|3868995_3870243_+|glutamate-5-semialdehyde-dehydrogenase
MMTIQPLLEKARQATASIRTLPDAQKQALLQALSRTLTENIPAITAENQKDLDAMPDDDPKKDRLLLNAPRIRSLAASLLDIARLPDPANQLLLENQLDNGLLIQKKTVPLGVVGVIYESRPNVTVDVAALCIRSGNVCVLRGGSDAIHTNTFLVSLIQDTLRAFHADENAVQLLPVDRALVTEMLTAAQYIDIIIPRGSQQLIDFVRQHSRVPVIETGAGVCHTYVERSANLEQAAAIVTNAKVSRPSVCNALDTVLVDEPVASGFIALLAPQLAAHNVDIYADPAAYALLEAQQYPHLHPAAPEDFGREFLSLKCSIKIVPDTKAALAHIQAFSSRHSEAIISRDPIVSEQFLNAVDAAAVYVNASTRFTDGGVFGLGAEIGISTQKLHARGPFALEKLVTEKWFVYGSGQTR

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Crispr_ID: NZ_CP051204_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP051204_6

4729494-4729587

Orphan

Consensus_repeat	Method
GTTTACGGCAGAGCGGTGCATTGTAAACC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP051204_6

>merge|NZ_CP051204|6|4729494-4729587|CRISPRCasFinder
GTTTACGGCAGAGCGGTGCATTGTAAACCTGCATCACATGCCATTTTTGCACTGTTAAATGACATGTTTACGGCAGAGCGGTGCCTTGTAAACC

>NZ_CP051204|6|6|4729494-4729587|CRISPRCasFinder
GTTTACGGCAGAGCGGTGCATTGTAAACC	TGCATCACATGCCATTTTTGCACTGTTAAATGACAT
GTTTACGGCAGAGCGGTGCCTTGTAAACC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP051204.1\|WP_168806079.1\|4722548_4723238_-\|NUDIX-hydrolase	unknown	unknown	gnl\|CDD\|223979
NZ_CP051204.1\|WP_168861282.1\|4721916_4722552_-\|DUF4291-domain-containing-protein	unknown	unknown	gnl\|CDD\|379483
NZ_CP051204.1\|WP_168806095.1\|4729750_4730170_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237030
NZ_CP051204.1\|WP_168861286.1\|4732082_4734200_-\|catalase	unknown	unknown	gnl\|CDD\|236886
NZ_CP051204.1\|WP_168806089.1\|4726949_4728671_-\|urease-subunit-alpha	unknown	unknown	gnl\|CDD\|237305
NZ_CP051204.1\|WP_168806109.1\|4739345_4739732_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051204.1\|WP_168861284.1\|4726425_4726938_-\|urease-accessory-protein-UreE	unknown	unknown	gnl\|CDD\|237322
NZ_CP051204.1\|WP_168806085.1\|4725075_4725714_-\|urease-accessory-protein-UreG	unknown	unknown	gnl\|CDD\|129208
NZ_CP051204.1\|WP_168806113.1\|4740640_4741018_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051204.1\|WP_168806093.1\|4729061_4729364_-\|urease-subunit-gamma	unknown	unknown	gnl\|CDD\|376347
NZ_CP051204.1\|WP_168806081.1\|4723442_4724144_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051204.1\|WP_168861283.1\|4724140_4724956_-\|urease-accessory-protein-UreD	unknown	unknown	gnl\|CDD\|376611
NZ_CP051204.1\|WP_168806091.1\|4728667_4729042_-\|urease-subunit-beta	unknown	unknown	gnl\|CDD\|238238
NZ_CP051204.1\|WP_168811912.1\|4725731_4726424_-\|urease-accessory-protein-UreF	unknown	unknown	gnl\|CDD\|223900
NZ_CP051204.1\|WP_168861288.1\|4736499_4738002_+\|PAS-domain-S-box-protein	unknown	unknown	gnl\|CDD\|223715
NZ_CP051204.1\|WP_168806101.1\|4734377_4735331_+\|YiiG-family-protein	unknown	unknown	gnl\|CDD\|372366
NZ_CP051204.1\|WP_168806107.1\|4738008_4739067_+\|response-regulator	unknown	unknown	gnl\|CDD\|223736
NZ_CP051204.1\|WP_168806111.1\|4739747_4740437_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051204.1\|WP_168861285.1\|4730397_4731939_-\|sulfatase	unknown	unknown	gnl\|CDD\|293763
NZ_CP051204.1\|WP_168861287.1\|4735452_4736166_+\|pirin-family-protein	unknown	unknown	gnl\|CDD\|380375

Protein	Function_ID	Function_description	E-value
NZ_CP051204.1\|WP_168806079.1\|4722548_4723238_-\|NUDIX-hydrolase	gnl\|CDD\|223979	COG1051, COG1051, ADP-ribose pyrophosphatase [Nucleotide transport and metabolism].	1.19856e-26
NZ_CP051204.1\|WP_168861282.1\|4721916_4722552_-\|DUF4291-domain-containing-protein	gnl\|CDD\|379483	pfam14124, DUF4291, Domain of unknown function (DUF4291). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 190 and 214 amino acids in length. There are two conserved sequence motifs: VYQAY and RMTW.	1.67872e-96
NZ_CP051204.1\|WP_168806095.1\|4729750_4730170_+\|hypothetical-protein	gnl\|CDD\|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	0.00925304
NZ_CP051204.1\|WP_168861286.1\|4732082_4734200_-\|catalase	gnl\|CDD\|236886	PRK11249, katE, hydroperoxidase II; Provisional.	0
NZ_CP051204.1\|WP_168806089.1\|4726949_4728671_-\|urease-subunit-alpha	gnl\|CDD\|237305	PRK13207, ureC, urease subunit alpha; Reviewed.	0
NZ_CP051204.1\|WP_168861284.1\|4726425_4726938_-\|urease-accessory-protein-UreE	gnl\|CDD\|237322	PRK13261, ureE, urease accessory protein UreE; Provisional.	2.2532e-46
NZ_CP051204.1\|WP_168806085.1\|4725075_4725714_-\|urease-accessory-protein-UreG	gnl\|CDD\|129208	TIGR00101, Urease_accessory_protein_UreG, urease accessory protein UreG. This model represents UreG, a GTP hydrolase that acts in the assembly of the nickel metallocenter of urease. It is found only in urease-positive species, although some urease-positive species (e.g. Bacillus subtilis) lack this protein. A similar protein, hypB, is an accessory protein for expression of hydrogenase, which also uses nickel. [Central intermediary metabolism, Nitrogen metabolism].	4.61455e-128
NZ_CP051204.1\|WP_168806093.1\|4729061_4729364_-\|urease-subunit-gamma	gnl\|CDD\|376347	pfam00547, Urease_gamma, Urease, gamma subunit. Urease is a nickel-binding enzyme that catalyzes the hydrolysis of urea to carbon dioxide and ammonia.	3.8951e-69
NZ_CP051204.1\|WP_168861283.1\|4724140_4724956_-\|urease-accessory-protein-UreD	gnl\|CDD\|376611	pfam01774, UreD, UreD urease accessory protein. UreD is a urease accessory protein. Urease pfam00449 hydrolyzes urea into ammonia and carbamic acid. UreD is involved in activation of the urease enzyme via the UreD-UreF-UreG-urease complex and is required for urease nickel metallocenter assembly. See also UreF pfam01730, UreG pfam01495.	1.16506e-56
NZ_CP051204.1\|WP_168806091.1\|4728667_4729042_-\|urease-subunit-beta	gnl\|CDD\|238238	cd00407, Urease_beta, Urease beta-subunit; Urease is a nickel-dependent metalloenzyme that catalyzes the hydrolysis of urea to form ammonia and carbon dioxide. Nickel-dependent ureases are found in bacteria, archaea, fungi and plants. Their primary role is to allow the use of external and internally-generated urea as a nitrogen source. The enzyme consists of three subunits, alpha, beta and gamma, which can exist as separate proteins or can be fused on a single protein chain. The alpha-beta-gamma heterotrimer forms multimers, mainly trimers. The large alpha subunit is the catalytic domain containing an active site with a bi-nickel center complexed by a carbamylated lysine. The beta and gamma subunits play a role in subunit association to form the higher order trimers.	1.73976e-67
NZ_CP051204.1\|WP_168811912.1\|4725731_4726424_-\|urease-accessory-protein-UreF	gnl\|CDD\|223900	COG0830, UreF, Urease accessory protein UreF [Posttranslational modification, protein turnover, chaperones].	1.19926e-64
NZ_CP051204.1\|WP_168861288.1\|4736499_4738002_+\|PAS-domain-S-box-protein	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	1.57347e-46
NZ_CP051204.1\|WP_168806101.1\|4734377_4735331_+\|YiiG-family-protein	gnl\|CDD\|372366	pfam12889, DUF3829, Protein of unknown function (DUF3829). This is a small family of proteins from several bacterial species, whose function is not known. It may, however, be related to the GvpL_GvpF family of proteins, pfam06386.	0.00842933
NZ_CP051204.1\|WP_168806107.1\|4738008_4739067_+\|response-regulator	gnl\|CDD\|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	4.63731e-39
NZ_CP051204.1\|WP_168861285.1\|4730397_4731939_-\|sulfatase	gnl\|CDD\|293763	cd16144, ARS_like, uncharacterized arylsulfatase subfamily. Sulfatases catalyze the hydrolysis of sulfate esters from wide range of substrates, including steroids, carbohydrates and proteins. Sulfate esters may be formed from various alcohols and amines. The biological roles of sulfatase includes the cycling of sulfur in the environment, in the degradation of sulfated glycosaminoglycans and glycolipids in the lysosome, and in remodeling sulfated glycosaminoglycans in the extracellular space. The sulfatases are essential for human metabolism. At least eight human monogenic diseases are caused by the deficiency of individual sulfatases.	2.7992e-169
NZ_CP051204.1\|WP_168861287.1\|4735452_4736166_+\|pirin-family-protein	gnl\|CDD\|380375	cd02910, cupin_Yhhw_N, Escherichia coli YhhW and YhaK and related proteins, pirin-like bicupin, N-terminal cupin domain. This family includes the N-terminal cupin domains of YhhW and YhaK, Escherichia coli pirin-like proteins with unknown function. YhhW is structurally similar not only to human pirin but also to quercitin 2,3-dioxygenase (quercitinase). Although the function of YhhW is not completely understood, YhhW and its human ortholog have quercitinase activity and are likely to play an important role in transcription and apoptosis. This N-terminal cupin domain of YhhW has a metal coordination site and is thought to have catalytic activity while the C-terminal cupin-like domain has diverged considerably and has closer alignment with C-terminal pirin. YhaK is found in low abundance in the cytosol of E. coli and is strongly up-regulated by nitroso-glutathione (GSNO). There are major structural differences at the N-terminus of YhaK compared with YhhW; YhaK lacks the canonical cupin metal-binding residues of pirins and may be involved in chloride binding and/or sensing of oxidative stress in enterobacteria. YhaK showed no quercetinase and peroxidase activity; however, reduced YhaK was very sensitive to reactive oxygen species (ROS). Proteins in this family belong to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold.	4.6521e-51

>NZ_CP051204.1|WP_168806093.1|4729061_4729364_-|urease-subunit-gamma
MHLTPRETEKLLLHLAGELAAKRKARGLKLNYPEAIALISSELLEAARDGRSVADLMQYGATILTREDVMEGIPEMIHDIQIEATFPDGTKLVTVHHPIR
>NZ_CP051204.1|WP_168806091.1|4728667_4729042_-|urease-subunit-beta
MIPGEYFLANGDIHCNEGRQTVTIKVINTADRPVQIGSHFHFFEVNRQMSFDRAKAFGKRLNIPAGTAVRFEPGEEKEVQLVELGGARRAFGLNCLVNGDTTLDSSRQKAMAKLAASNFKNQQS
>NZ_CP051204.1|WP_168806089.1|4726949_4728671_-|urease-subunit-alpha
MSLIINREQYVNMYGPTTGDKVRLGDTDIIIEIEKDFNHYGDESKFGGGKTVRDGMAQSSTATRDQGVLDMVITNVVLIDHWGIVKGDLGIKDGKIAGFGQAGNPDTMDGVDRNMVIGASTEVHGGNGLIATAGGIDTHIHFISPQQIETALFSGITTMIGGGTGPADGTNATTVTPGKWYIAKMLQAADDFPMNLGFFGKGNCSTEAPIAEQVEAGALGVKIHEDWGATPAVIDAALKVADKYDVQVAIHTDTLNEAGFLEDTINAINGRVIHTFHTEGAGGGHAPDIIKAAMYPNVLPASTNPTRPYTVNTIDEHLDMLMVCHHLSKSIPEDVAFADSRIRPETIAAEDILHDMGVFSIMSSDSQAMGRVGEVVTRTWQTADKMKKQRGFLEEDAAAQSDNFRAKRYVAKYTINPAIAHGIDEYVGSVEPGKIADIVLWKPALFGAKPEMIIKGGMIIAAKMGDPNASIPTPQPVILRTMFGAHGRAMHQTCATFVSKASLEKGIVEEYGLQKMVLPVSGCRNISKRDLIHNDKTPEITVNPENYEVRVDGVHITCEPVDTVPLAQRYFLF
>NZ_CP051204.1|WP_168861284.1|4726425_4726938_-|urease-accessory-protein-UreE
MIIDKIIGNTGTTPLEGRTTDLLLLEWFETTKRIQRKHTQQGMEIAIRFLKEGQRLRIGDILYMDDARAVVVDIIPSDAIVVNPRSLPEMGSVCYEIGNKHLPMFIQDDQVLLPFEEPIYRWLLAAGYQTEKTHTKLTNLLNANVQPHAHGNSGGSSLFSKIMSLAAKER
>NZ_CP051204.1|WP_168811912.1|4725731_4726424_-|urease-accessory-protein-UreF
MRATAFLGSLLHLSDPTLPIGSYTHSNGLETYVQLGLVNNVPSAEMFVRHMLTNNLQYNDAAFVCLAYHAAAANDLAALLALDEEAAALKLPREIRQASQKLGVRLMKIFSRQQSYALAQQYEAAAAAKRAEGHYSIAYGLYACLMGVPLPEALYAFYYNAAVGMVTNAVKLVPLGQLDGQDVLFRMQPVIQSLVGATMTLDRELVGVCNIGFDIRCMQHEQLYSRLYMS
>NZ_CP051204.1|WP_168806085.1|4725075_4725714_-|urease-accessory-protein-UreG
MSDRKYVKIGVAGPVGSGKTALIERLSRALMNTYDMGVITNDIYTKEDAEFLTKNSLLPKERIIGVETGGCPHTAIREDASMNLEAVDEMAARFPNIELILIESGGDNLSATFSPDLADVTIFVIDVAEGDKIPRKGGPGITRSDLLVINKIDLAPYVHADLGVMERDARKMRQGKPFVFTNLMSLQGLDTVIGWIKKYALLEETEEPALVR
>NZ_CP051204.1|WP_168861283.1|4724140_4724956_-|urease-accessory-protein-UreD
MNRLSLISSFKNGRSRLKDSYCTRPFKLANVGIYRQDPALYLMVMSSSPGILDGDHYDIDVRTESHSRLQLQSQSYQRLFNMKTGAQQQQRIHMEAQSVFSYVQHPMVPHENAMFKSHTVAHLEDDCQFTFGEIITCGRKHSGEVFRFSKLHSITEIFHRGKLILKDNLLLQPQLLPMQAIGQMEGYTHQATLLFIHTGAADMESNMTALRQLLEEEQGIVGGISVPDARCLVVRILGNGGEQLYNCLRKMQRYLWQPAGVADETLKTATT
>NZ_CP051204.1|WP_168806081.1|4723442_4724144_-|hypothetical-protein
MNIGLTTLVVSAVTISCLHTATGPDHYLPFIVLSRSKKWTMAKTIFWTVLCGFGHILSSVVIGLIGVLLGWQLSKLTWFQDVRGNMSGWCLLGFGIAYLLWGLRQAYLNKPHKHFDVYEGGDIYVYEHRHGDIVYPQQRVKVTPWILFAIFVMGPSEPLVPLLFYSGSHRSALEVVVLISVFTLTTVLTMLAMVLIGCYGYSFLKTDKLERYVHAIGGAVVTLCGIGMVFLGW
>NZ_CP051204.1|WP_168806079.1|4722548_4723238_-|NUDIX-hydrolase
MAKLFHEYKNPSLAVDLVIFGYHDNTLSVLLLNRKEEPFKDCWTLPGGFLQMEETFLDTCSRILKTKTGMDDVFLEQLYSFDGPGRDPRGRVIAVGYYALINPSRFNIIAGSMANDVKWFDVHKMPKLGFDHQDIFQLALQRLKSKILYDPVGFELLDELFTITELHELYECILGTTIDRRNFRRKILDAGYVINTGTKREGLQNRHPELYKFNKKLKKNSFQINVNVS
>NZ_CP051204.1|WP_168861282.1|4721916_4722552_-|DUF4291-domain-containing-protein
MKLKTVSWKKLQETLPASGKQLIAQQTADTVVVYQAYSPAIARYAVDHQVFGGNAYSYDRMSWIKPNFLWMMYRCGWAAKEGQERVLAVHLPKTFFEKILSQAVPSSYKPWLFPEKEAWQAALQAGDVRLQWDPDHDPWGNKLERRAIQLGLRGDILKEFGQRQIVAIEDITGFVKEQYAVLQRDPDALQVPEESVYPLEDPVLCTTIDLR
>NZ_CP051204.1|WP_168806095.1|4729750_4730170_+|hypothetical-protein
MKKLIAAIAVMLAVSPAFAQNAPATAPAPVQQAPAKPAKAPKAAPEQRAAQYTDELKTKLDLTDDQYKKILAVNTECIRRKDSLKAAGQKDGPGKKEISAYRKQQFQAILTPDQQAKLKAMNAQHHNKDKKEKDAGENK
>NZ_CP051204.1|WP_168861285.1|4730397_4731939_-|sulfatase
MKTLLLACTLTAAASVSAQFKDPRPAKPKPNIIVFLVDDMGWEDTSVPFWDQLTDKNKRFRTPNMERLAKEGVKFTNAYATPVCTPSRVSMITGMNAAHHGVTNWTSPHKDVNADAPDNTLDSAPWNQNGFSPVKGIPHTVYATPLPALLKSTGYYTIHAGKAHWGAMGTPGANPYNMGFLVNIAGHAAGHPQSYLSEENYGNMPGKATAQAVPDLEEYYGTGTFLTEALTREALKALDEPVNRKQPFYLYLAHYAVHVPLQADKRYYQHYLDIGMDEAEAKYASLIEGMDASLGEVMDYLSNRKIADNTIILFMSDNGGLSLAPPRGGAPHTQNLPLRAGKGSVYEGGIREPMLVKWPGVTKAGSVAHQYVMVEDFFPSILEMAGIQLYDAVQTIDGKSFVPMLEDPSVADSLRTLVWHYPNKWIPDGGPGINYKSALRQGRWKVVYDQQQGTAELYDLVADIGEKRDLSAVYPDKARSLLTLLSQQLQRWNAPMPVLKASGKPLPWPENKR
>NZ_CP051204.1|WP_168861286.1|4732082_4734200_-|catalase
MAKKKNELPNKKAEQLAPHTEDGADQFLTTDQGVRINDNQNTLKAGERGPSLLEDFIMREKITHFDHERIPERIVHARGAGAHGYFQVYASMAEHTRAGFLCDPGRRTPVFVRFSTVAGSRGSTDLARDVRGFAVKFYTEEGNYDLVGNNMPVFFIQDAVKFPDFVHAVKPEPHHEMPQAASAHDTFWDFISIMPESMHMIMWVMSDRAIPRSYRMMEGFGVHTFRWINAAGKGCFVKFHWKPLLGVHSVAWEEAQQISGKDPDFHRRDLWNAIESGNFPEFELGVQLIPEEDEHKYPFDLLDPTKIIPEEVVPVQRIGKMVLDRNPDNFFAETEQVAFHPGHLVPGIDFTNDPLLQGRLFSYLDTQLSRLGSPNFHEIPINRPVAPVHNNQRDGHMRQTINRGGTAYEPNTISAGCPFQAKMADGGFHSYTERIDGQKIRGRSKSFFDHFSQATLFYRSQSPAEQRHLVNALRFELGKVTNTDIRIRMVGLLSQVDKGLAAAVAAGLGVAVPAQPEQPMNRSIPADGDPAQYQPHAVQQPVEKSAALSMEHTVKDTIKTRQIAFLVADGVDSGAITAMKDALLKAGAQVQLVAPRLGAIRAASGSSFEADQSLLTAASVLFDAVYVPGGAESVATLQQHPDAIRFVNEAYRHCKPVAVAGEGLQLLKATRVPPEEASGVVISGQAKAFIAAIAQHRFWERELAK
>NZ_CP051204.1|WP_168806101.1|4734377_4735331_+|YiiG-family-protein
MNKKFLYAAMSVAMLSVSVSCDNSKGAKGPAAYENNSVEKASHVIEYTNLLIDMANKQNSYITRVAENTDRIEKGLKNPSDRFAFIGIITPSYFDMSRSMNKVKPEEPVDELSSDDKKFFKEKVPAYTASFKKLQEQYKKLSDYLKAENYKDDKSALGFALVDSIRSTTQQLMTDKAVLMKKVNEIADASEAIVLKESPLKDYILAMKADLKSVRDFVELAESSEGDYNAIKQKAEAAYAALEKAQAEHSQLNLDNAKKERKDGYYKSFYDRVNDFLITAKKIMRDSAEKGKIDEYQVESLGSSYDNLISSYNSFNS
>NZ_CP051204.1|WP_168861287.1|4735452_4736166_+|pirin-family-protein
MKTQYFPAGERGVKDIGWLKSNFFFSFSDYYHPMRSAFGTLVAFNDDFVTAGKGFGIHPHVNMEIISVLLKGKMNHKDTLGYSTKIEAGGVQIMSAGEGLRHEEYNVGEGDVNFLQIWIQPKLQNITPRYQQRSFPRNNRKNRLTTIVSAEEGLEHCWINQNARLSLGYYDLPGSVPYTLHPVNKCLFIFLIEGTLKVNNQVLHPRDAMGIWEASEISLQHGEETEFLIIETPINQK
>NZ_CP051204.1|WP_168861288.1|4736499_4738002_+|PAS-domain-S-box-protein
MPGFELLFNHATQGILLVDGAGLIKAANPCFLEWSGHTAEEVQEKPADSLLAGDIRSWLRCKNGQVIPVKVTCTSYLQDDQHYQVCFITDLSAQQQTADALKRAQDAQQLEAHIMAGKESAYRRVSNFLNSIWTNLDAILIVTEPMGHIRFFNPAAVKMLGYPAREVTDTGSLVQFHDFEELEHRAAKLSEELQQVVEPGFDALTAKARLNLPNESEWSYIRKDGSRFPVALTVSAIRDESQQITGYIAIGLDISARRKSEAELRQALDKEKELNVLKSRFVSIASHEFRTPLSTVLSSTYLLEKYTTTEDQPKRLAHIRKIASAVHLLTDILNDFLSLGKIEEGKIQVRPALTDTRKHVEKILAEAEGLKRARQQVVYSHDGPAESWFDGSLLRHILTNLVSNALKFSPDEGTVYVRTLATPYRLTVSVKDCGIGIKPEDQQHLFERFFRGSNVENIQGTGLGLHIVAKYTELMKGQITCHSEPDKGTEFIVHIPTPKT
>NZ_CP051204.1|WP_168806107.1|4738008_4739067_+|response-regulator
MEKILLIEDNKDIRDNLSEILELANYHVLTASNGKEGVTIALEQQPDLIVCDIMMPVLDGYGVLHMLHKNESLRPIPFIFLTAKTERTDVRKGMEMGADDYITKPFEGAELLSAIESRLRRCAEIRQPETSGISGLHTLLSNTSGKDLLASLKEDRNTNHYKKKQQIYAAGNRPESLYYIMEGKVKTYQRNDDGKELITGLYNQGDFLGYTALLEAGAYQESAEAIEDTVLAIIPHQDFEELVNNNPEVLSRFVQLLAKNIAEKEQQLIALAYSSLRKKVASALITLDHKYNTTNKPQFEIDISRENLAAVAGVAKESLIRTLGDFRDEQLITLRDGTIVLKEKEKIAAMRN
>NZ_CP051204.1|WP_168806109.1|4739345_4739732_-|hypothetical-protein
MNNREEIRGKNLQDQQICRGWLSILEGLRKENTALLDRLTASLRHVNSREFLDQAEAFQEKMISKNESLKLLRHEVMEQLDWLDIVPQPREEAPHDWPVLTQDMRKMQEEFEKMKAAFNNLLRNWQLE
>NZ_CP051204.1|WP_168806111.1|4739747_4740437_-|hypothetical-protein
MFTGFFSSSLQRRFCEGFLFYPIRRLRQYGGYIFKQYKSKSGIKTLLENQRQIFDYNGYYASELARQLKDTALPQAAKLSRKLEALYVASRQEMQHNAVGFMEFNEVIISYYRELSTYQVVVLESLEKEMKPAIRIKADDAALQSFRPDYHGNVRDVMKAFIKESNRTAGYLQKCIDGDSNIYDICADRKMQDLVNSIKEMTLIQRGMVTLLQHWEDQQRLNGLQVYYN
>NZ_CP051204.1|WP_168806113.1|4740640_4741018_+|hypothetical-protein
MRNSAEKLRQLANVTTPAYSFQYLLLVSAGDYKFLKEIASMYLDALLDYVNDCRQLAVDKDLEALKHQTHKVATSFKSLGMDYLQPCFDQIKHCGVWDNATNDSINILISTAENNVPLVRKDLGL

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Crispr_ID: NZ_CP051204_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP051204_7

6406454-6406578

Orphan

Consensus_repeat	Method
TTTCAGAAGCATCCACCTTGAAACATCCAGCCAATTTTCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP051204_7

>merge|NZ_CP051204|7|6406454-6406578|CRISPRCasFinder
TTTCAGAAGCATCCACCTTGAAACATCCAGCCAATTTTCCACCCCATTTAACTGCCCCCTCTTTTTCAGATTTAGAGACCTACTGTTTCAGAAGCATCCACCTTGAAACATCCAGCCAATTTTCC

>NZ_CP051204|7|7|6406454-6406578|CRISPRCasFinder
TTTCAGAAGCATCCACCTTGAAACATCCAGCCAATTTTCC	ACCCCATTTAACTGCCCCCTCTTTTTCAGATTTAGAGACCTACTG
TTTCAGAAGCATCCACCTTGAAACATCCAGCCAATTTTCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP051204.1\|WP_168862455.1\|6397316_6399350_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225942
NZ_CP051204.1\|WP_168812056.1\|6402775_6403255_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274357
NZ_CP051204.1\|WP_168861743.1\|6403928_6405797_-\|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-enzyme-MnmG	unknown	unknown	gnl\|CDD\|235362
NZ_CP051204.1\|WP_168861742.1\|6401538_6402783_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051204.1\|WP_168808483.1\|6411862_6412870_-\|quinolinate-synthase-NadA	unknown	unknown	gnl\|CDD\|236489
NZ_CP051204.1\|WP_168861740.1\|6399524_6401006_+\|cardiolipin-synthase	unknown	unknown	gnl\|CDD\|234967
NZ_CP051204.1\|WP_168861745.1\|6408138_6408873_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051204.1\|WP_168812058.1\|6409608_6409830_+\|ferrous-iron-transport-protein-A	unknown	unknown	gnl\|CDD\|377199
NZ_CP051204.1\|WP_168808494.1\|6419194_6419749_+\|type-1-glutamine-amidotransferase	unknown	unknown	gnl\|CDD\|153228
NZ_CP051204.1\|WP_168808487.1\|6415833_6416340_+\|DUF2480-family-protein	unknown	unknown	gnl\|CDD\|313799
NZ_CP051204.1\|WP_168861748.1\|6417648_6418908_-\|DUF3472-domain-containing-protein	unknown	unknown	gnl\|CDD\|378772
NZ_CP051204.1\|WP_168808450.1\|6392783_6393464_+\|ATP-dependent-Clp-protease-proteolytic-subunit	unknown	unknown	gnl\|CDD\|178955
NZ_CP051204.1\|WP_168861747.1\|6413636_6415727_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372650
NZ_CP051204.1\|WP_168861746.1\|6408997_6409429_-\|rRNA-maturation-RNase-YbeY	unknown	unknown	gnl\|CDD\|272871
NZ_CP051204.1\|WP_168808457.1\|6394031_6394832_-\|DUF2837-family-protein	unknown	unknown	gnl\|CDD\|378535
NZ_CP051204.1\|WP_168808490.1\|6416336_6417458_-\|magnesium/cobalt-transporter-CorA	unknown	unknown	gnl\|CDD\|213362
NZ_CP051204.1\|WP_168861739.1\|6395139_6397284_+\|alpha-galactosidase	unknown	unknown	gnl\|CDD\|307952
NZ_CP051204.1\|WP_168861744.1\|6406893_6407340_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051204.1\|WP_168861741.1\|6401010_6401421_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051204.1\|WP_168808451.1\|6393432_6393966_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP051204.1\|WP_168862455.1\|6397316_6399350_-\|hypothetical-protein	gnl\|CDD\|225942	COG3408, GDB1, Glycogen debranching enzyme [Carbohydrate transport and metabolism].	0.00089651
NZ_CP051204.1\|WP_168812056.1\|6402775_6403255_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	8.39771e-28
NZ_CP051204.1\|WP_168861743.1\|6403928_6405797_-\|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-enzyme-MnmG	gnl\|CDD\|235362	PRK05192, PRK05192, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG.	0
NZ_CP051204.1\|WP_168808483.1\|6411862_6412870_-\|quinolinate-synthase-NadA	gnl\|CDD\|236489	PRK09375, PRK09375, quinolinate synthase NadA.	0
NZ_CP051204.1\|WP_168861740.1\|6399524_6401006_+\|cardiolipin-synthase	gnl\|CDD\|234967	PRK01642, cls, cardiolipin synthetase; Reviewed.	2.11553e-137
NZ_CP051204.1\|WP_168812058.1\|6409608_6409830_+\|ferrous-iron-transport-protein-A	gnl\|CDD\|377199	pfam04023, FeoA, FeoA domain. This family includes FeoA a small protein, probably involved in Fe2+ transport. This presumed short domain is also found at the C-terminus of a variety of metal dependent transcriptional regulators. This suggests that this domain may be metal-binding. In most cases this is likely to be either iron or manganese.	1.13905e-19
NZ_CP051204.1\|WP_168808494.1\|6419194_6419749_+\|type-1-glutamine-amidotransferase	gnl\|CDD\|153228	cd03134, GATase1_PfpI_like, A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus. A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus. This group includes proteins similar to PfpI from P. furiosus. and PH1704 from Pyrococcus horikoshii. These enzymes are ATP-independent intracellular proteases and may hydrolyze small peptides to provide a nutritional source. Only Cys of the catalytic triad typical of GATase1 domains is conserved in this group. This Cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. For PH1704, it is believed that this Cys together with a different His in one monomer and Glu (from an adjacent monomer) forms a different catalytic triad from the typical GATase1domain. PfpI is homooligomeric. Protease activity is only found for oligomeric forms of PH1704.	7.55802e-86
NZ_CP051204.1\|WP_168808487.1\|6415833_6416340_+\|DUF2480-family-protein	gnl\|CDD\|313799	pfam10652, DUF2480, Protein of unknown function (DUF2480). All the members of this family are uncharacterized proteins, but the environment in which they are found on the bacterial genome suggests a function as a glucose-6-phosphate isomerase (EC 5.3.1.9). This could not, however, be confirmed.	4.48382e-97
NZ_CP051204.1\|WP_168861748.1\|6417648_6418908_-\|DUF3472-domain-containing-protein	gnl\|CDD\|378772	pfam11958, DUF3472, Domain of unknown function (DUF3472). This presumed domain is functionally uncharacterized. This domain is found in bacteria, eukaryotes and viruses. This domain is typically between 174 to 190 amino acids in length. This domain has a single completely conserved residue G that may be functionally important.	6.39558e-70
NZ_CP051204.1\|WP_168808450.1\|6392783_6393464_+\|ATP-dependent-Clp-protease-proteolytic-subunit	gnl\|CDD\|178955	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed.	1.57304e-82
NZ_CP051204.1\|WP_168861747.1\|6413636_6415727_+\|hypothetical-protein	gnl\|CDD\|372650	pfam13616, Rotamase_3, PPIC-type PPIASE domain. Rotamases increase the rate of protein folding by catalyzing the interconversion of cis-proline and trans-proline.	1.36332e-38
NZ_CP051204.1\|WP_168861746.1\|6408997_6409429_-\|rRNA-maturation-RNase-YbeY	gnl\|CDD\|272871	TIGR00043, Endoribonuclease_YbeY, rRNA maturation RNase YbeY. This metalloprotein family is represented by a single member sequence only in nearly every bacterium. Crystallography demonstrated metal-binding activity, possibly to nickel. It is a predicted to be a metallohydrolase, and more recently it was shown that mutants have a ribosomal RNA processing defect. [Protein synthesis, Other].	3.04884e-26
NZ_CP051204.1\|WP_168808457.1\|6394031_6394832_-\|DUF2837-family-protein	gnl\|CDD\|378535	pfam10997, Amj, Alternate to MurJ. This bacterial family of proteins has no known function. However, family members include lipid II flippase Amj, which is required for bacterial cell wall synthesis. It transports lipid-linked peptidoglycan precursors from the inner to the outer surface of the cytoplasmic membrane.	3.28438e-104
NZ_CP051204.1\|WP_168808490.1\|6416336_6417458_-\|magnesium/cobalt-transporter-CorA	gnl\|CDD\|213362	cd12828, TmCorA-like_1, Thermotoga maritima CorA_like subfamily. This subfamily belongs to the Thermotoga maritima CorA (TmCorA)-family of the MIT superfamily of essential membrane proteins involved in transporting divalent cations (uptake or efflux) across membranes. Members of this subfamily are found in all three kingdoms of life. It is functionally diverse subfamily, in addition to the CorA Co2+ transporter from the hyperthermophilic Thermotoga maritima, it includes Methanosarcina mazei CorA which may be involved in transport of copper and/or other divalent metal ions. Thermotoga maritima CorA forms funnel-shaped homopentamers, the tip of the funnel is formed from two C-terminal transmembrane (TM) helices from each monomer, and the large opening of the funnel from the N-terminal cytoplasmic domains. The GMN signature motif of the MIT superfamily occurs just after TM1, mutation within this motif is known to abolish Mg2+ transport by a related protein, Saccharomyces cerevisiae Alr1p. Natural variants in this signature sequence may be associated with the transport of different divalent cations. The functional diversity of the MIT superfamily may also be due to minor structural differences regulating gating, substrate selection, and transport.	4.3405e-135
NZ_CP051204.1\|WP_168861739.1\|6395139_6397284_+\|alpha-galactosidase	gnl\|CDD\|307952	pfam02065, Melibiase, Melibiase. Glycoside hydrolase families GH27, GH31 and GH36 form the glycoside hydrolase clan GH-D. Glycoside hydrolase family 36 can be split into 11 families, GH36A to GH36K. This family includes enzymes from GH36A-B and GH36D-K and from GH27.	2.38794e-113

>NZ_CP051204.1|WP_168861743.1|6403928_6405797_-|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-enzyme-MnmG
MFPSYDIIVVGAGHAGCEAAAAAANMGSKVLLVTMNMQTIAQMSCNPAMGGIAKGQIVREIDALGGFSGIVTDQSLIQFRMLNRSKGPAMWSPRAQSDRMLFAAKWREALEKTPNVDFYQDMVKGLLVKDGRCYGVVTGLGHEIKAKAVVLTNGTFLNGVIHIGDKQFGGGRVAEKAATGITEQLVSLGFESDRLKTGTPPRIDGRSLDYSKMEEQLGDEDIVGFSYLDIEKIKPAQQRSCWITYTSDAVHEMLRTGFDRSPMFQGRIQGTGPRYCPSIEDKINRFAERERHQLFVEPEGFDTVEIYVNGFSTSLPEDVQMKALRLVPGFENCRMFRPGYAIEYDFFPPTQLQFSLETKQVQNLFFAGQINGTTGYEEAACQGLMAGINAHLKATEQDPFILKRSEAYIGVLIDDLINKGTEEPYRMFTSRAEFRTLLRQDNADLRLTERSYKLGLAKEDRMAKVQQKKEQVEKVKTILKELSIEPEEIGTLLESKSSAGLTQKQRAHQILLRPNLDIFSMKTAVPKIEQALAGFGREVLEQAEIQIKYDVYIEKENELVKKMSQLEDLIIPENFDYSKLVSLSTEAKQKFTKIRPHTLGQASRISGVNPSDVQILMVYMGR
>NZ_CP051204.1|WP_168812056.1|6402775_6403255_-|sigma-70-family-RNA-polymerase-sigma-factor
MRYAPNREEAIEIMNDGFLKVFQRISTFDSNRPFKAWLSKIMVNTAIDFLRSKKKLVFTDQAEHYHELGKEDNVVEKLSYDELLMHVQSLSPAYRTVFNLYVMEGYQHHEIAVLLGISQGTSKSNLFKAKKILQEKILIAAGKGATATTAVNFVVHKNE
>NZ_CP051204.1|WP_168861742.1|6401538_6402783_-|hypothetical-protein
MSEDFENSIRNKLNEADHPFDPQAWEKMEALLDGDKGRKPVLIWWWAAAAILLLALGVWWFMPDTGSTKQQQQITGAQHFPGENLPEKNSGRLPEKKENQEKTPEKYQQLPVAVPAVTNQQPGTAGKEALVIPSYTIAANNDSGTLRLQGSETNPPALSQQRPVLPLSGETIVNNINDYTKIDSNNLNDYTKIDTPAVKEDYQTVSVALKDSTLTAVTRKTKKWYAGLVFGPDLTVAPSFKYGNIGFNAGVLVHYYFNRNLFVTTGAVYSKKIYGASPNDYRTGSTSTPYGTLEKVNADCDVLDVPINMNYTFLSVKKNKVSATLGFSNYFMLKEKYRYLYEYGPPKERTVTNENQHYLSIINAGILYQRPSGRGLLLGVQPYVKIPLNGVGYGQVKLYSAGMTVHLTFTGKKP
>NZ_CP051204.1|WP_168861741.1|6401010_6401421_-|hypothetical-protein
MANKHDDKKKRKTGEEEQDFPGYPAYPASEDIMNRENRSNEVDLNMDDVTRSFRHNSELPEDKRKSPKRSDEQEETWRQDKTGDDLDVPGAELDDDSEAIGEEDEENNLYSLGGDRHQDLEEDNGEFLDEDEDDKY
>NZ_CP051204.1|WP_168861740.1|6399524_6401006_+|cardiolipin-synthase
MHTLINYLTGSDWHLYVKISSTVLLILTFAGVIFSILLENRNPIKAMAYIMLLVFIPIVGLIVYYYLGRDLRKKRRFTLKGSKDEVLFAKYWQSQRSEIEQMQLELRQAVGTKQELSAMLLNTRQSILTKNNRVKLLINGEEKFPEVMAALRAAKHHIHIEYYMIAADDVGNEVTQILVEKLNQGVQVRFVYDDMGSDRIKKIPKILKENGASVYTFSPVLVGLYRNANYRNHRKIIVIDGSVGFVGGINLDDRYINNGKHDLFWRDTHLKIEGDAVNLLQLQFLMSYRYCSKEVFPFEAPFFGRSATLSGTCFTDIVASGPDSEWPMTMSSILMAINVAKRRIRITNPYFVPTEELLTALQIAALAGKDVQLLLPLKGDSFIVQHAALSYMKPLLAAGVKVFFYTRGFIHAKTMVIDDNLAWVSSVNFDNRSFFLNCEIGVLVYDKEVTAKLDRAFDEDLLYALPVQETRWNRRNIFNRFMDSVCRLLTPLL
>NZ_CP051204.1|WP_168862455.1|6397316_6399350_-|hypothetical-protein
MSHEFMKTILIKGVLAAACLCPYDGYAQTPDRWKIASDGSIIWNINGPVPHADHIEMAGKKVALWLQYGVDSSGASVITRTIVFPTYRLMPNKTETAMMYTVADNMLPRFFINNKLWKPDVYNGGPVKALPEKVRSMQHSGITTINSVLGNDRLVELKRTFFPSDNQPLVLEQLVFINHGTQPVPIEMEAMQLERMPAESRSANGPLYFTIETAGAGRQQVAAGDSVRFVIGYSARRGTEPRPQINADAELAGRRQRIAGILSLLQLETPDTLLNTAFAFAKIRATESIYLTKGGYLHGPGGLRYYAAIWANDQAEYVNPFFGFLGDSIALNSAMNSYRWFAKYMNPDYKPIPSSIVAEGDGTWHGAKDRGDMAMIAYGASRYALAAGNADSARVLWPLIEWSLEYLRRQVNENGVVHSDSDELEGRFPAGKANLNTSALYYDALRSAVLLAKQLKVPARDYAQRAEALRKNIDRFFGATVEGFDTYRYYEENKVLRAWIATPLTTGLFERKEGTIAALFSPKLWTEDGLASQSGDRTFWDRSTLYALRGVFAAGETARAMDKLEYYSRRRLLGEHVPYPVEAYPEGNQRHLSAESGLYCRIFTEGMFGMRPTGFNSFDCTPRLPEGWDHMALRNIHAFGKIFDVEVKRKDKNRLLIVANGKEYTIKDGTTLPIILK
>NZ_CP051204.1|WP_168861739.1|6395139_6397284_+|alpha-galactosidase
MKKLFCIGLLLLSHSVFAQRQQVRLSTRNISLVYSVNPEGRLVQQYFGQALQPAEADTSSRGSQEAYITAGMESLLDPAIRIVHNDGNPSLELKYVSSRSGKKDNNVSTTDITLKDPVYPVTVTLHFETYFQEDVIKAWTEIRHTEKQPVLLTAYASSMLHFNAARYWLTQFHGDWAKEANMVEEKLTKGSKVLDSKLGVRANMYQSPMFLLSLNGPANENTGEVMAGTLAWTGNFRFGFEVDEKNALHVSAGINPYASDYTLQPNEVFTTPAFLFTWSDHGKGQTSRNFQHWAVNYGILDGHTPRLTLLNNWEATGMHFDEAKLTSLFSGAAKLGTDLFLLDDGWFANKYPRDADNAGLGDWDTNKDKLPHGLGYLVKEAEKQGVKFGIWLEPEMVNPKSELYTKHPDWILRLPNRGEHYYRNQLVLDLVNPAVQDFVFDIVDKTMSENPGIAYIKWDCNRMMTNTYSPYLKGKQSHLFVDYTRSLYKVLERVRAKYPHLPIMLCSGGGGRTDYGAMKYFTEFWPSDNTDPLDRIYIQYGYSHFFPANTMAAHVTNMGKQSLKFRTDVAMMGKLGYDIKVDDFTPQELQFSHDAVATYNRLRDIIWYGDFYRLVSPYGQPRAVFQYTSADKQKTVVFHYLMNTRRVDIFPVVKLQGLDPKKNYRVTETNLFPGTKSAFGNQVYSGDFLMNTGISLTPGRVKPLSSNILEVVAE
>NZ_CP051204.1|WP_168808457.1|6394031_6394832_-|DUF2837-family-protein
MTPQIIIVLVLTAVINLIVTLSFAVRIVGVTTGRIAITFSLFNILVLVSRTANTFQAPLLAKTVEDELKQQVTGNEGLFRLIILSCTIGSVIGAALIPSFQRMLSKAVEHFSVHRSVPRLLYLGFSGSGMQFIKENLKMPSRESITGLHPVKGFPRKMFLFNLVATAIMTISVLCCVYAAYLNPDYRTTASNLSGVINGVATLLMVLFIDPHSSVLTDDVVLGKVSVSYFRQYITYMVIARVAGTLLAQLLLLPGAALIAKLAEYV
>NZ_CP051204.1|WP_168808451.1|6393432_6393966_-|hypothetical-protein
MFFNPQPLFVIVGYPNSGKRKVLQEIFARKHFFPLKDPFIPVVFPQNKFVVINRTNHRGASDMFCTHLSQVLRRHIFSSAAFMLMLSFILDGGRRDARQVVQYLEASGFLVHYLVLAGSWEDKRVLAEEALEPLQAAVRHGRIHYFDRLVTRSPLRFQQRTEEIIAVIREVLGGSCR
>NZ_CP051204.1|WP_168808450.1|6392783_6393464_+|ATP-dependent-Clp-protease-proteolytic-subunit
MAFLIPTVIDGDGRNAFDIYSLLLKERIIFLGTAIDDQVANLIVAQLLYLDSIGHQPISIYINSPGGAIYSGLAIYDTMKMLKSPVSTMSVGFTGSMSTVILSAGAKGQRYALPHATVHMHPAGGGAKGYTEDVRIAYREQERLQSQLFYLLAQHAGRRTEEIEAAFDNDHFMNAVEAQAFGLVDQVLGSTEDLIALEHSPFRVALMQPQLAAGKALTGSSRPALP
>NZ_CP051204.1|WP_168861744.1|6406893_6407340_-|hypothetical-protein
MNFRPDVNPRFRLSEYSVFHHIRFLKSLLMTLLFSVEISGDDGLNRNTPTTIKQSSKNTGFFSGQHGSGYFSRINYPPDANMWTIFLSLVLSLSRLMEGLVMTLLWAGRLSLSPSDHLKSRRLHPHLQGMQFRPPAKMSGELLAEFSV
>NZ_CP051204.1|WP_168861745.1|6408138_6408873_+|hypothetical-protein
MAIFLGWQVTGFETGISDALLPCYAAFQEAPLLAARLIMLKAALNACFLATPLLRKLPLLAARLIMLKAALNACFLATPLLRKLPLPAARLIRLKAAFKCLLPGCVAFKKAPLLAARLIRLKAAFKCLLPGCVAFKKAPLLAARLIRLKAAFKCLLPGCAAFQEAPPAGSQGDHVESLYSRSCFPPGLLAGTYLLTGLPSCPLPRLSVIIIGKHPNSSPCSYPAVLTGIHQTISLLVMNPNRVL
>NZ_CP051204.1|WP_168861746.1|6408997_6409429_-|rRNA-maturation-RNase-YbeY
MAIQFTAHEVKVDLKEKRKLKAFLKDLFADEGQGVKDLHYIFCSDAYLLEINKQFLQHDTYTDIVTFEMGEDPDVTEGEIYISVDRVKENAGKFKVSVNQELHRVIFHGALHLCGFKDKSKAENALMQQMEDKYLIKYFGALE
>NZ_CP051204.1|WP_168812058.1|6409608_6409830_+|ferrous-iron-transport-protein-A
MKLSSLATGKSAVIIEFEKDDLHIKLMEMGCVPGETVKIEKIAPLGDPISIMVAGYNLSLRKTEADHIWVEEI
>NZ_CP051204.1|WP_168808483.1|6411862_6412870_-|quinolinate-synthase-NadA
MITEIAVAKKNLQHNGFLDIPVDPALDLFAAIENLKKEKNAIVLAHYYQEPDIQDVADYIGDSLGLSQQAAKTDADIIVFAGVHFMAETAKILSPQKKVLLPDLKAGCSLADSAPPELFKKFRDKYPDHIVISYINCSAGIKALSDIICTSSNAEKIIESVPKDQPIIFAPDRNLGSYLIKKTGRDMVLWNGACMVHEIFSLEKITKLKTQHPKAKIIAHPECEPAVLAVADYIGSTTGLLKFSKKDDAQEYIVVTETGILHQMQKENPGKTFIPAPPNNACACNDCPHMKLNTLEKLYLCMEYEQPEITMEESLRIAAKKPIERMLEISERAGL
>NZ_CP051204.1|WP_168861747.1|6413636_6415727_+|hypothetical-protein
MSVIQKIRDKYAVVIVVVICLAIVSFLLQDAFFGKSSLARRSTTVGKVNGEELDLGEYQRRIQDAEAGARQQMPNGNIDEQTRQYIREQVWNQFLNEQIMQAQYEKLGIAVTEAEVVDQIKGKNPNPIVVQQFTRDGQFDRVALQQTIAQAPQNPQIRAALAQLETYIAKSQEQLKYITLIKQGVYYPKWMAAQQQEDNSKTATISYVSVPYASIADSTIKVTDAELNRFIQDHKELFKVEESRKVEYVSFDAVPSAQDSAAAIQQIVALKAELDTTNDVAGFINRNSEIKYYDGYVSKSAAQVPQKDSIVNLPVGAVYGPYYDNNLIVFAKMVDRKNMPDSVKVRHILIASGPQGGLPDSVAKKRADSIEVAVRGGADFKALVTQYSDDPGSKQTGGEYDITPATQFVPEFKDFAFEGSKGQIKTVKTQFGYHVIEIMDQKNIGPAIKVAYLGKAVDASKETNNNAYGAASDFAGKSRTAVTFEKNVQQGKLNKRIADNLRPMDFVIPGIGQSRELVRWAYEAKKGDVSTVFTFDDKYVVAVLTSVRAEGTAPLDDVRPQVEAEVKKHKKAEQIIAKLQTPASLDAAAKSTNQPVLKAEGVSFASPFIASLGFEPRVAGASFNKAWGTAKVSAPIEGNAAVYVIKADSYEPAQQAQDLATQQAAYEQGIKSLLDQQLFEVLKKKSDIKDTRGKFF
>NZ_CP051204.1|WP_168808487.1|6415833_6416340_+|DUF2480-family-protein
MDEIVNKVAQSGLETIDLEQFYPKGETVIFDMKDYLFMGMILKEKDFRTAMQSHDWEQYRGKNVGLVCTADAVVPLWAYMLVMTNLEPVAAYAAFGDAEFIYKTLYLKNLSSLDVAAFTDKRIVIKGCGDKRVGEVAYAEVTRLLRPVAKSIMYGEPCSSVPVYKKKA
>NZ_CP051204.1|WP_168808490.1|6416336_6417458_-|magnesium/cobalt-transporter-CorA
MLKSVKKRLPIPVVMDMLDELNPFKVKRQRIMNFNPATSVASRKPAENSKITVFDYSGNGCTEETLVSLEEVFAYRDKPTSTWINVDGIRKDDVHAICQHYMIHPLIEEDILSIGQRAKMDDIGERLFCQLPMMYFNSEASTIDLEQVSIVMGKNFVISFQEDPTRDVFDPVREKLKIPGSRIRNGTMDFLCYSLLDVIVDSYFTVLDKLGERIELMEDLVQHYPNTRTLARINFLRRQVFLFKRGIAPVRELVNGFLKSESDLLEDNVTKYYKDVYDHIIQCNDLADNYRDMILNVQEMYHTQLNLKMNEIMKVLAVVTTLLSPLTLIAGIYGMNFHNMPELASPNGYFYTLGGMGVLLVLMILIFRKRGWF
>NZ_CP051204.1|WP_168861748.1|6417648_6418908_-|DUF3472-domain-containing-protein
MKKNMLFCALFAGLLAVQQVSAQSSPVVLPGFTAYADPEEKKVDINEHKGVTNWTGNENTVNFYFHATSTGKLKVTLQARSDAGSKVLVTLNGVSKTVSIPVNNEYAAIPALETNIKKAGFYAVTLKGLEKSGKVYADVKGVSLEGAATKDIQFNPKSWRRSASVHLNYPIPEGKNAEWFYGEIKVPAGEDKVGTYFMSCGFHRGYFGMQVNSPEERRIIFSVWDAGSEPDKRDNVKYEDQVVLLAKGDSVYASGFGGEGTGGHSHWVYNWKAGDTYRFLMHSVPTGTTTTYTAYFYVPEHREWKLIASFRAPKDGKYMGHLYSFLENFSFENGHLGRKGYYGNHWIKTDTGEWIELTKAKFTNDATAKAKDRLDFGGGAENGWFYLWTSGFKPADAQYGNILERPATGQHPEITLPRF
>NZ_CP051204.1|WP_168808494.1|6419194_6419749_+|type-1-glutamine-amidotransferase
MGTQLQNKKVAVLVANGFEEVELTAPLEALKEAGAKVDIISPEKEKVKAWAEKEWGKDYPVDKNLSDANAQDYDALVLPGGVLNPDQLRINQQAVTFVGGFFEDGKPIAAICHGPWTLIETGELKGRRVTSYPSLKTDLENAGATWTDEEVVTDNGLVTSRTPKDLPAFCKKMVEEIAEGAHVV

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Crispr_ID: NZ_CP051204_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP051204_8

6408255-6408365

Orphan

Consensus_repeat	Method
GTTGAAAGCTGCGTTAAATGCCTGCTTCCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP051204_8

>merge|NZ_CP051204|8|6408255-6408365|CRISPRCasFinder
GTTGAAAGCTGCGTTAAATGCCTGCTTCCTTGCTACGCCACTTTTAAGAAAGCTCCCCCTGCTGGCAGCCAGGTTGATCATGTTGAAAGCTGCGTTAAATGCCTGCTTCCT

>NZ_CP051204|8|8|6408255-6408365|CRISPRCasFinder
GTTGAAAGCTGCGTTAAATGCCTGCTTCCT	TGCTACGCCACTTTTAAGAAAGCTCCCCCTGCTGGCAGCCAGGTTGATCAT
GTTGAAAGCTGCGTTAAATGCCTGCTTCCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP051204.1\|WP_168862455.1\|6397316_6399350_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225942
NZ_CP051204.1\|WP_168808487.1\|6415833_6416340_+\|DUF2480-family-protein	unknown	unknown	gnl\|CDD\|313799
NZ_CP051204.1\|WP_168861743.1\|6403928_6405797_-\|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-enzyme-MnmG	unknown	unknown	gnl\|CDD\|235362
NZ_CP051204.1\|WP_168861742.1\|6401538_6402783_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051204.1\|WP_168808483.1\|6411862_6412870_-\|quinolinate-synthase-NadA	unknown	unknown	gnl\|CDD\|236489
NZ_CP051204.1\|WP_168861740.1\|6399524_6401006_+\|cardiolipin-synthase	unknown	unknown	gnl\|CDD\|234967
NZ_CP051204.1\|WP_168808496.1\|6419802_6420180_-\|septal-ring-lytic-transglycosylase-RlpA-family-protein	unknown	unknown	gnl\|CDD\|223868
NZ_CP051204.1\|WP_168812058.1\|6409608_6409830_+\|ferrous-iron-transport-protein-A	unknown	unknown	gnl\|CDD\|377199
NZ_CP051204.1\|WP_168808494.1\|6419194_6419749_+\|type-1-glutamine-amidotransferase	unknown	unknown	gnl\|CDD\|153228
NZ_CP051204.1\|WP_168861748.1\|6417648_6418908_-\|DUF3472-domain-containing-protein	unknown	unknown	gnl\|CDD\|378772
NZ_CP051204.1\|WP_168812056.1\|6402775_6403255_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274357
NZ_CP051204.1\|WP_168861747.1\|6413636_6415727_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372650
NZ_CP051204.1\|WP_168861746.1\|6408997_6409429_-\|rRNA-maturation-RNase-YbeY	unknown	unknown	gnl\|CDD\|272871
NZ_CP051204.1\|WP_168808457.1\|6394031_6394832_-\|DUF2837-family-protein	unknown	unknown	gnl\|CDD\|378535
NZ_CP051204.1\|WP_168808490.1\|6416336_6417458_-\|magnesium/cobalt-transporter-CorA	unknown	unknown	gnl\|CDD\|213362
NZ_CP051204.1\|WP_168861749.1\|6420325_6422062_+\|ubiquinone-dependent-pyruvate-dehydrogenase	unknown	unknown	gnl\|CDD\|180614
NZ_CP051204.1\|WP_168861739.1\|6395139_6397284_+\|alpha-galactosidase	unknown	unknown	gnl\|CDD\|307952
NZ_CP051204.1\|WP_168861741.1\|6401010_6401421_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051204.1\|WP_168808451.1\|6393432_6393966_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051204.1\|WP_168861744.1\|6406893_6407340_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP051204.1\|WP_168862455.1\|6397316_6399350_-\|hypothetical-protein	gnl\|CDD\|225942	COG3408, GDB1, Glycogen debranching enzyme [Carbohydrate transport and metabolism].	0.00089651
NZ_CP051204.1\|WP_168808487.1\|6415833_6416340_+\|DUF2480-family-protein	gnl\|CDD\|313799	pfam10652, DUF2480, Protein of unknown function (DUF2480). All the members of this family are uncharacterized proteins, but the environment in which they are found on the bacterial genome suggests a function as a glucose-6-phosphate isomerase (EC 5.3.1.9). This could not, however, be confirmed.	4.48382e-97
NZ_CP051204.1\|WP_168861743.1\|6403928_6405797_-\|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-enzyme-MnmG	gnl\|CDD\|235362	PRK05192, PRK05192, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG.	0
NZ_CP051204.1\|WP_168808483.1\|6411862_6412870_-\|quinolinate-synthase-NadA	gnl\|CDD\|236489	PRK09375, PRK09375, quinolinate synthase NadA.	0
NZ_CP051204.1\|WP_168861740.1\|6399524_6401006_+\|cardiolipin-synthase	gnl\|CDD\|234967	PRK01642, cls, cardiolipin synthetase; Reviewed.	2.11553e-137
NZ_CP051204.1\|WP_168808496.1\|6419802_6420180_-\|septal-ring-lytic-transglycosylase-RlpA-family-protein	gnl\|CDD\|223868	COG0797, RlpA, Lipoproteins [Cell envelope biogenesis, outer membrane].	3.80019e-47
NZ_CP051204.1\|WP_168812058.1\|6409608_6409830_+\|ferrous-iron-transport-protein-A	gnl\|CDD\|377199	pfam04023, FeoA, FeoA domain. This family includes FeoA a small protein, probably involved in Fe2+ transport. This presumed short domain is also found at the C-terminus of a variety of metal dependent transcriptional regulators. This suggests that this domain may be metal-binding. In most cases this is likely to be either iron or manganese.	1.13905e-19
NZ_CP051204.1\|WP_168808494.1\|6419194_6419749_+\|type-1-glutamine-amidotransferase	gnl\|CDD\|153228	cd03134, GATase1_PfpI_like, A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus. A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus. This group includes proteins similar to PfpI from P. furiosus. and PH1704 from Pyrococcus horikoshii. These enzymes are ATP-independent intracellular proteases and may hydrolyze small peptides to provide a nutritional source. Only Cys of the catalytic triad typical of GATase1 domains is conserved in this group. This Cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. For PH1704, it is believed that this Cys together with a different His in one monomer and Glu (from an adjacent monomer) forms a different catalytic triad from the typical GATase1domain. PfpI is homooligomeric. Protease activity is only found for oligomeric forms of PH1704.	7.55802e-86
NZ_CP051204.1\|WP_168861748.1\|6417648_6418908_-\|DUF3472-domain-containing-protein	gnl\|CDD\|378772	pfam11958, DUF3472, Domain of unknown function (DUF3472). This presumed domain is functionally uncharacterized. This domain is found in bacteria, eukaryotes and viruses. This domain is typically between 174 to 190 amino acids in length. This domain has a single completely conserved residue G that may be functionally important.	6.39558e-70
NZ_CP051204.1\|WP_168812056.1\|6402775_6403255_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	8.39771e-28
NZ_CP051204.1\|WP_168861747.1\|6413636_6415727_+\|hypothetical-protein	gnl\|CDD\|372650	pfam13616, Rotamase_3, PPIC-type PPIASE domain. Rotamases increase the rate of protein folding by catalyzing the interconversion of cis-proline and trans-proline.	1.36332e-38
NZ_CP051204.1\|WP_168861746.1\|6408997_6409429_-\|rRNA-maturation-RNase-YbeY	gnl\|CDD\|272871	TIGR00043, Endoribonuclease_YbeY, rRNA maturation RNase YbeY. This metalloprotein family is represented by a single member sequence only in nearly every bacterium. Crystallography demonstrated metal-binding activity, possibly to nickel. It is a predicted to be a metallohydrolase, and more recently it was shown that mutants have a ribosomal RNA processing defect. [Protein synthesis, Other].	3.04884e-26
NZ_CP051204.1\|WP_168808457.1\|6394031_6394832_-\|DUF2837-family-protein	gnl\|CDD\|378535	pfam10997, Amj, Alternate to MurJ. This bacterial family of proteins has no known function. However, family members include lipid II flippase Amj, which is required for bacterial cell wall synthesis. It transports lipid-linked peptidoglycan precursors from the inner to the outer surface of the cytoplasmic membrane.	3.28438e-104
NZ_CP051204.1\|WP_168808490.1\|6416336_6417458_-\|magnesium/cobalt-transporter-CorA	gnl\|CDD\|213362	cd12828, TmCorA-like_1, Thermotoga maritima CorA_like subfamily. This subfamily belongs to the Thermotoga maritima CorA (TmCorA)-family of the MIT superfamily of essential membrane proteins involved in transporting divalent cations (uptake or efflux) across membranes. Members of this subfamily are found in all three kingdoms of life. It is functionally diverse subfamily, in addition to the CorA Co2+ transporter from the hyperthermophilic Thermotoga maritima, it includes Methanosarcina mazei CorA which may be involved in transport of copper and/or other divalent metal ions. Thermotoga maritima CorA forms funnel-shaped homopentamers, the tip of the funnel is formed from two C-terminal transmembrane (TM) helices from each monomer, and the large opening of the funnel from the N-terminal cytoplasmic domains. The GMN signature motif of the MIT superfamily occurs just after TM1, mutation within this motif is known to abolish Mg2+ transport by a related protein, Saccharomyces cerevisiae Alr1p. Natural variants in this signature sequence may be associated with the transport of different divalent cations. The functional diversity of the MIT superfamily may also be due to minor structural differences regulating gating, substrate selection, and transport.	4.3405e-135
NZ_CP051204.1\|WP_168861739.1\|6395139_6397284_+\|alpha-galactosidase	gnl\|CDD\|307952	pfam02065, Melibiase, Melibiase. Glycoside hydrolase families GH27, GH31 and GH36 form the glycoside hydrolase clan GH-D. Glycoside hydrolase family 36 can be split into 11 families, GH36A to GH36K. This family includes enzymes from GH36A-B and GH36D-K and from GH27.	2.38794e-113
NZ_CP051204.1\|WP_168861749.1\|6420325_6422062_+\|ubiquinone-dependent-pyruvate-dehydrogenase	gnl\|CDD\|180614	PRK06546, PRK06546, pyruvate dehydrogenase; Provisional.	0

>NZ_CP051204.1|WP_168861744.1|6406893_6407340_-|hypothetical-protein
MNFRPDVNPRFRLSEYSVFHHIRFLKSLLMTLLFSVEISGDDGLNRNTPTTIKQSSKNTGFFSGQHGSGYFSRINYPPDANMWTIFLSLVLSLSRLMEGLVMTLLWAGRLSLSPSDHLKSRRLHPHLQGMQFRPPAKMSGELLAEFSV
>NZ_CP051204.1|WP_168861743.1|6403928_6405797_-|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-enzyme-MnmG
MFPSYDIIVVGAGHAGCEAAAAAANMGSKVLLVTMNMQTIAQMSCNPAMGGIAKGQIVREIDALGGFSGIVTDQSLIQFRMLNRSKGPAMWSPRAQSDRMLFAAKWREALEKTPNVDFYQDMVKGLLVKDGRCYGVVTGLGHEIKAKAVVLTNGTFLNGVIHIGDKQFGGGRVAEKAATGITEQLVSLGFESDRLKTGTPPRIDGRSLDYSKMEEQLGDEDIVGFSYLDIEKIKPAQQRSCWITYTSDAVHEMLRTGFDRSPMFQGRIQGTGPRYCPSIEDKINRFAERERHQLFVEPEGFDTVEIYVNGFSTSLPEDVQMKALRLVPGFENCRMFRPGYAIEYDFFPPTQLQFSLETKQVQNLFFAGQINGTTGYEEAACQGLMAGINAHLKATEQDPFILKRSEAYIGVLIDDLINKGTEEPYRMFTSRAEFRTLLRQDNADLRLTERSYKLGLAKEDRMAKVQQKKEQVEKVKTILKELSIEPEEIGTLLESKSSAGLTQKQRAHQILLRPNLDIFSMKTAVPKIEQALAGFGREVLEQAEIQIKYDVYIEKENELVKKMSQLEDLIIPENFDYSKLVSLSTEAKQKFTKIRPHTLGQASRISGVNPSDVQILMVYMGR
>NZ_CP051204.1|WP_168812056.1|6402775_6403255_-|sigma-70-family-RNA-polymerase-sigma-factor
MRYAPNREEAIEIMNDGFLKVFQRISTFDSNRPFKAWLSKIMVNTAIDFLRSKKKLVFTDQAEHYHELGKEDNVVEKLSYDELLMHVQSLSPAYRTVFNLYVMEGYQHHEIAVLLGISQGTSKSNLFKAKKILQEKILIAAGKGATATTAVNFVVHKNE
>NZ_CP051204.1|WP_168861742.1|6401538_6402783_-|hypothetical-protein
MSEDFENSIRNKLNEADHPFDPQAWEKMEALLDGDKGRKPVLIWWWAAAAILLLALGVWWFMPDTGSTKQQQQITGAQHFPGENLPEKNSGRLPEKKENQEKTPEKYQQLPVAVPAVTNQQPGTAGKEALVIPSYTIAANNDSGTLRLQGSETNPPALSQQRPVLPLSGETIVNNINDYTKIDSNNLNDYTKIDTPAVKEDYQTVSVALKDSTLTAVTRKTKKWYAGLVFGPDLTVAPSFKYGNIGFNAGVLVHYYFNRNLFVTTGAVYSKKIYGASPNDYRTGSTSTPYGTLEKVNADCDVLDVPINMNYTFLSVKKNKVSATLGFSNYFMLKEKYRYLYEYGPPKERTVTNENQHYLSIINAGILYQRPSGRGLLLGVQPYVKIPLNGVGYGQVKLYSAGMTVHLTFTGKKP
>NZ_CP051204.1|WP_168861741.1|6401010_6401421_-|hypothetical-protein
MANKHDDKKKRKTGEEEQDFPGYPAYPASEDIMNRENRSNEVDLNMDDVTRSFRHNSELPEDKRKSPKRSDEQEETWRQDKTGDDLDVPGAELDDDSEAIGEEDEENNLYSLGGDRHQDLEEDNGEFLDEDEDDKY
>NZ_CP051204.1|WP_168861740.1|6399524_6401006_+|cardiolipin-synthase
MHTLINYLTGSDWHLYVKISSTVLLILTFAGVIFSILLENRNPIKAMAYIMLLVFIPIVGLIVYYYLGRDLRKKRRFTLKGSKDEVLFAKYWQSQRSEIEQMQLELRQAVGTKQELSAMLLNTRQSILTKNNRVKLLINGEEKFPEVMAALRAAKHHIHIEYYMIAADDVGNEVTQILVEKLNQGVQVRFVYDDMGSDRIKKIPKILKENGASVYTFSPVLVGLYRNANYRNHRKIIVIDGSVGFVGGINLDDRYINNGKHDLFWRDTHLKIEGDAVNLLQLQFLMSYRYCSKEVFPFEAPFFGRSATLSGTCFTDIVASGPDSEWPMTMSSILMAINVAKRRIRITNPYFVPTEELLTALQIAALAGKDVQLLLPLKGDSFIVQHAALSYMKPLLAAGVKVFFYTRGFIHAKTMVIDDNLAWVSSVNFDNRSFFLNCEIGVLVYDKEVTAKLDRAFDEDLLYALPVQETRWNRRNIFNRFMDSVCRLLTPLL
>NZ_CP051204.1|WP_168862455.1|6397316_6399350_-|hypothetical-protein
MSHEFMKTILIKGVLAAACLCPYDGYAQTPDRWKIASDGSIIWNINGPVPHADHIEMAGKKVALWLQYGVDSSGASVITRTIVFPTYRLMPNKTETAMMYTVADNMLPRFFINNKLWKPDVYNGGPVKALPEKVRSMQHSGITTINSVLGNDRLVELKRTFFPSDNQPLVLEQLVFINHGTQPVPIEMEAMQLERMPAESRSANGPLYFTIETAGAGRQQVAAGDSVRFVIGYSARRGTEPRPQINADAELAGRRQRIAGILSLLQLETPDTLLNTAFAFAKIRATESIYLTKGGYLHGPGGLRYYAAIWANDQAEYVNPFFGFLGDSIALNSAMNSYRWFAKYMNPDYKPIPSSIVAEGDGTWHGAKDRGDMAMIAYGASRYALAAGNADSARVLWPLIEWSLEYLRRQVNENGVVHSDSDELEGRFPAGKANLNTSALYYDALRSAVLLAKQLKVPARDYAQRAEALRKNIDRFFGATVEGFDTYRYYEENKVLRAWIATPLTTGLFERKEGTIAALFSPKLWTEDGLASQSGDRTFWDRSTLYALRGVFAAGETARAMDKLEYYSRRRLLGEHVPYPVEAYPEGNQRHLSAESGLYCRIFTEGMFGMRPTGFNSFDCTPRLPEGWDHMALRNIHAFGKIFDVEVKRKDKNRLLIVANGKEYTIKDGTTLPIILK
>NZ_CP051204.1|WP_168861739.1|6395139_6397284_+|alpha-galactosidase
MKKLFCIGLLLLSHSVFAQRQQVRLSTRNISLVYSVNPEGRLVQQYFGQALQPAEADTSSRGSQEAYITAGMESLLDPAIRIVHNDGNPSLELKYVSSRSGKKDNNVSTTDITLKDPVYPVTVTLHFETYFQEDVIKAWTEIRHTEKQPVLLTAYASSMLHFNAARYWLTQFHGDWAKEANMVEEKLTKGSKVLDSKLGVRANMYQSPMFLLSLNGPANENTGEVMAGTLAWTGNFRFGFEVDEKNALHVSAGINPYASDYTLQPNEVFTTPAFLFTWSDHGKGQTSRNFQHWAVNYGILDGHTPRLTLLNNWEATGMHFDEAKLTSLFSGAAKLGTDLFLLDDGWFANKYPRDADNAGLGDWDTNKDKLPHGLGYLVKEAEKQGVKFGIWLEPEMVNPKSELYTKHPDWILRLPNRGEHYYRNQLVLDLVNPAVQDFVFDIVDKTMSENPGIAYIKWDCNRMMTNTYSPYLKGKQSHLFVDYTRSLYKVLERVRAKYPHLPIMLCSGGGGRTDYGAMKYFTEFWPSDNTDPLDRIYIQYGYSHFFPANTMAAHVTNMGKQSLKFRTDVAMMGKLGYDIKVDDFTPQELQFSHDAVATYNRLRDIIWYGDFYRLVSPYGQPRAVFQYTSADKQKTVVFHYLMNTRRVDIFPVVKLQGLDPKKNYRVTETNLFPGTKSAFGNQVYSGDFLMNTGISLTPGRVKPLSSNILEVVAE
>NZ_CP051204.1|WP_168808457.1|6394031_6394832_-|DUF2837-family-protein
MTPQIIIVLVLTAVINLIVTLSFAVRIVGVTTGRIAITFSLFNILVLVSRTANTFQAPLLAKTVEDELKQQVTGNEGLFRLIILSCTIGSVIGAALIPSFQRMLSKAVEHFSVHRSVPRLLYLGFSGSGMQFIKENLKMPSRESITGLHPVKGFPRKMFLFNLVATAIMTISVLCCVYAAYLNPDYRTTASNLSGVINGVATLLMVLFIDPHSSVLTDDVVLGKVSVSYFRQYITYMVIARVAGTLLAQLLLLPGAALIAKLAEYV
>NZ_CP051204.1|WP_168808451.1|6393432_6393966_-|hypothetical-protein
MFFNPQPLFVIVGYPNSGKRKVLQEIFARKHFFPLKDPFIPVVFPQNKFVVINRTNHRGASDMFCTHLSQVLRRHIFSSAAFMLMLSFILDGGRRDARQVVQYLEASGFLVHYLVLAGSWEDKRVLAEEALEPLQAAVRHGRIHYFDRLVTRSPLRFQQRTEEIIAVIREVLGGSCR
>NZ_CP051204.1|WP_168861746.1|6408997_6409429_-|rRNA-maturation-RNase-YbeY
MAIQFTAHEVKVDLKEKRKLKAFLKDLFADEGQGVKDLHYIFCSDAYLLEINKQFLQHDTYTDIVTFEMGEDPDVTEGEIYISVDRVKENAGKFKVSVNQELHRVIFHGALHLCGFKDKSKAENALMQQMEDKYLIKYFGALE
>NZ_CP051204.1|WP_168812058.1|6409608_6409830_+|ferrous-iron-transport-protein-A
MKLSSLATGKSAVIIEFEKDDLHIKLMEMGCVPGETVKIEKIAPLGDPISIMVAGYNLSLRKTEADHIWVEEI
>NZ_CP051204.1|WP_168808483.1|6411862_6412870_-|quinolinate-synthase-NadA
MITEIAVAKKNLQHNGFLDIPVDPALDLFAAIENLKKEKNAIVLAHYYQEPDIQDVADYIGDSLGLSQQAAKTDADIIVFAGVHFMAETAKILSPQKKVLLPDLKAGCSLADSAPPELFKKFRDKYPDHIVISYINCSAGIKALSDIICTSSNAEKIIESVPKDQPIIFAPDRNLGSYLIKKTGRDMVLWNGACMVHEIFSLEKITKLKTQHPKAKIIAHPECEPAVLAVADYIGSTTGLLKFSKKDDAQEYIVVTETGILHQMQKENPGKTFIPAPPNNACACNDCPHMKLNTLEKLYLCMEYEQPEITMEESLRIAAKKPIERMLEISERAGL
>NZ_CP051204.1|WP_168861747.1|6413636_6415727_+|hypothetical-protein
MSVIQKIRDKYAVVIVVVICLAIVSFLLQDAFFGKSSLARRSTTVGKVNGEELDLGEYQRRIQDAEAGARQQMPNGNIDEQTRQYIREQVWNQFLNEQIMQAQYEKLGIAVTEAEVVDQIKGKNPNPIVVQQFTRDGQFDRVALQQTIAQAPQNPQIRAALAQLETYIAKSQEQLKYITLIKQGVYYPKWMAAQQQEDNSKTATISYVSVPYASIADSTIKVTDAELNRFIQDHKELFKVEESRKVEYVSFDAVPSAQDSAAAIQQIVALKAELDTTNDVAGFINRNSEIKYYDGYVSKSAAQVPQKDSIVNLPVGAVYGPYYDNNLIVFAKMVDRKNMPDSVKVRHILIASGPQGGLPDSVAKKRADSIEVAVRGGADFKALVTQYSDDPGSKQTGGEYDITPATQFVPEFKDFAFEGSKGQIKTVKTQFGYHVIEIMDQKNIGPAIKVAYLGKAVDASKETNNNAYGAASDFAGKSRTAVTFEKNVQQGKLNKRIADNLRPMDFVIPGIGQSRELVRWAYEAKKGDVSTVFTFDDKYVVAVLTSVRAEGTAPLDDVRPQVEAEVKKHKKAEQIIAKLQTPASLDAAAKSTNQPVLKAEGVSFASPFIASLGFEPRVAGASFNKAWGTAKVSAPIEGNAAVYVIKADSYEPAQQAQDLATQQAAYEQGIKSLLDQQLFEVLKKKSDIKDTRGKFF
>NZ_CP051204.1|WP_168808487.1|6415833_6416340_+|DUF2480-family-protein
MDEIVNKVAQSGLETIDLEQFYPKGETVIFDMKDYLFMGMILKEKDFRTAMQSHDWEQYRGKNVGLVCTADAVVPLWAYMLVMTNLEPVAAYAAFGDAEFIYKTLYLKNLSSLDVAAFTDKRIVIKGCGDKRVGEVAYAEVTRLLRPVAKSIMYGEPCSSVPVYKKKA
>NZ_CP051204.1|WP_168808490.1|6416336_6417458_-|magnesium/cobalt-transporter-CorA
MLKSVKKRLPIPVVMDMLDELNPFKVKRQRIMNFNPATSVASRKPAENSKITVFDYSGNGCTEETLVSLEEVFAYRDKPTSTWINVDGIRKDDVHAICQHYMIHPLIEEDILSIGQRAKMDDIGERLFCQLPMMYFNSEASTIDLEQVSIVMGKNFVISFQEDPTRDVFDPVREKLKIPGSRIRNGTMDFLCYSLLDVIVDSYFTVLDKLGERIELMEDLVQHYPNTRTLARINFLRRQVFLFKRGIAPVRELVNGFLKSESDLLEDNVTKYYKDVYDHIIQCNDLADNYRDMILNVQEMYHTQLNLKMNEIMKVLAVVTTLLSPLTLIAGIYGMNFHNMPELASPNGYFYTLGGMGVLLVLMILIFRKRGWF
>NZ_CP051204.1|WP_168861748.1|6417648_6418908_-|DUF3472-domain-containing-protein
MKKNMLFCALFAGLLAVQQVSAQSSPVVLPGFTAYADPEEKKVDINEHKGVTNWTGNENTVNFYFHATSTGKLKVTLQARSDAGSKVLVTLNGVSKTVSIPVNNEYAAIPALETNIKKAGFYAVTLKGLEKSGKVYADVKGVSLEGAATKDIQFNPKSWRRSASVHLNYPIPEGKNAEWFYGEIKVPAGEDKVGTYFMSCGFHRGYFGMQVNSPEERRIIFSVWDAGSEPDKRDNVKYEDQVVLLAKGDSVYASGFGGEGTGGHSHWVYNWKAGDTYRFLMHSVPTGTTTTYTAYFYVPEHREWKLIASFRAPKDGKYMGHLYSFLENFSFENGHLGRKGYYGNHWIKTDTGEWIELTKAKFTNDATAKAKDRLDFGGGAENGWFYLWTSGFKPADAQYGNILERPATGQHPEITLPRF
>NZ_CP051204.1|WP_168808494.1|6419194_6419749_+|type-1-glutamine-amidotransferase
MGTQLQNKKVAVLVANGFEEVELTAPLEALKEAGAKVDIISPEKEKVKAWAEKEWGKDYPVDKNLSDANAQDYDALVLPGGVLNPDQLRINQQAVTFVGGFFEDGKPIAAICHGPWTLIETGELKGRRVTSYPSLKTDLENAGATWTDEEVVTDNGLVTSRTPKDLPAFCKKMVEEIAEGAHVV
>NZ_CP051204.1|WP_168808496.1|6419802_6420180_-|septal-ring-lytic-transglycosylase-RlpA-family-protein
MRLSLHPFLLLACATLIISTTACSRKVTQNGKASYYADSFDGKRTANGETFRQRHLTAAHKTLPFGTRVKVVNIANGRSVKVRINDRGPFAPGRIIDLSKKAASKLGMINTGVANVEIKYKKPKK
>NZ_CP051204.1|WP_168861749.1|6420325_6422062_+|ubiquinone-dependent-pyruvate-dehydrogenase
MGKSVADQLVEMLADAGIKRIYAVTGDSLNHINDAVRRDGRIQWIHVRHEEVGAYAAGAEAQLNGLACCAGSSGPGHVHLINGLYDAHRSGAPVIAIASTCATHEFGSDYFQETNTIKLFADCSHYNQVANTPAQAPRMLQAALQHAVHKKGVAVLGLPGDVASADAENISTSLKLYRPSAVLRPTEKELQQLAALLQSAGKVAIYCGLGATAAHDEVVTLASLLKAPVGYSFRAKMGIEYDNPNEVGMTGLLGLASAYKSMHEADVVLLLGTDFPYTPFMPENAKIVQIDNQPEKLGRRASLEMGLCGDIGPTLQALMLLIQEKKDRKFLDTMLEFHEEVKRKLDTYVEDRGKEEAISPEYVATVISRLAANDAIFTVDTGMTNVWTARYIAATGKRTLLGSFNHGSMANAMPQAIGAALCQPGREVYALCGDGGLTMLLGDLMTIRQYNLPVKVIVFNNRALGMVKLEMEVAGLPDWQTDMVNPDFEGVATAMGFTAFTIRTPDEVEPVLTRVKDASGPVLVNIFTNPASLAMPPKIEFEQMKGYALWMGKLILGGRLDDVLEAVKSNYKHIKDVL

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Crispr_ID: NZ_CP051204_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP051204_9

6477403-6477506

Orphan

Consensus_repeat	Method
AAATCGAAAAATCGTAAATCAAAAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP051204_9

>merge|NZ_CP051204|9|6477403-6477506|CRISPRCasFinder
AAATCGAAAAATCGTAAATCAAAAAAAAGTCCCCGACAAATGATTTATCGTTGATTTCAGGTAAGCCAGGCAGCCTCCAAATCAAAAAATCGTAAATCAAAAAA

>NZ_CP051204|9|9|6477403-6477506|CRISPRCasFinder
AAATCGAAAAATCGTAAATCAAAAAA	AAGTCCCCGACAAATGATTTATCGTTGATTTCAGGTAAGCCAGGCAGCCTCC
AAATCAAAAAATCGTAAATCAAAAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP051204.1\|WP_168808599.1\|6484164_6485553_-\|cytochrome-c-oxidase-accessory-protein-CcoG	unknown	unknown	gnl\|CDD\|274278
NZ_CP051204.1\|WP_168862457.1\|6481621_6482983_-\|oxygen-independent-coproporphyrinogen-III-oxidase	unknown	unknown	gnl\|CDD\|236430
NZ_CP051204.1\|WP_168808593.1\|6480215_6481160_-\|UDP-3-O-(3-hydroxymyristoyl)glucosamine-N-acyltransferase	unknown	unknown	gnl\|CDD\|234858
NZ_CP051204.1\|WP_168808597.1\|6483699_6484137_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377555
NZ_CP051204.1\|WP_168808579.1\|6470129_6472994_-\|outer-membrane-beta-barrel-protein	unknown	unknown	gnl\|CDD\|379720
NZ_CP051204.1\|WP_168808572.1\|6466401_6466947_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|224584
NZ_CP051204.1\|WP_168808575.1\|6466940_6468401_-\|amino-acid-permease	unknown	unknown	gnl\|CDD\|129987
NZ_CP051204.1\|WP_168861764.1\|6473033_6473840_-\|GLPGLI-family-protein	unknown	unknown	gnl\|CDD\|273495
NZ_CP051204.1\|WP_078669638.1\|6469756_6470041_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051204.1\|WP_168808601.1\|6485557_6486634_-\|c-type-cytochrome	unknown	unknown	gnl\|CDD\|129864
NZ_CP051204.1\|WP_168808585.1\|6476316_6477345_+\|phenylalanine--tRNA-ligase-subunit-alpha	unknown	unknown	gnl\|CDD\|234780
NZ_CP051204.1\|WP_168808587.1\|6477519_6478368_+\|3-hydroxybutyryl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|236211
NZ_CP051204.1\|WP_168808595.1\|6482985_6483693_-\|sulfite-exporter-TauE/SafE-family-protein	unknown	unknown	gnl\|CDD\|372587
NZ_CP051204.1\|WP_168808577.1\|6468659_6469556_-\|TIM-barrel-protein	unknown	unknown	gnl\|CDD\|226149
NZ_CP051204.1\|WP_168861765.1\|6478458_6479436_+\|NAD-dependent-epimerase/dehydratase-family-protein	unknown	unknown	gnl\|CDD\|187539
NZ_CP051204.1\|WP_168861766.1\|6479440_6480124_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051204.1\|WP_168808603.1\|6486643_6486823_-\|CcoQ/FixQ-family-Cbb3-type-cytochrome-c-oxidase-assembly-chaperone	unknown	unknown	unknown
NZ_CP051204.1\|WP_168808583.1\|6474030_6475470_+\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_CP051204.1\|WP_078670335.1\|6475605_6476292_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP051204.1\|WP_168861763.1\|6465625_6466252_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP051204.1\|WP_168808599.1\|6484164_6485553_-\|cytochrome-c-oxidase-accessory-protein-CcoG	gnl\|CDD\|274278	TIGR02745, iron-sulfur_cluster-binding_protein, cytochrome c oxidase accessory protein FixG. Member of this ferredoxin-like protein family are found exclusively in species with an operon encoding the cbb3 type of cytochrome c oxidase (cco-cbb3), and near the cco-cbb3 operon in about half the cases. The cco-cbb3 is found in a variety of proteobacteria and almost nowhere else, and is associated with oxygen use under microaerobic conditions. Some (but not all) of these proteobacteria are also nitrogen-fixing, hence the gene symbol fixG. FixG was shown essential for functional cco-cbb3 expression in Bradyrhizobium japonicum.	1.00849e-136
NZ_CP051204.1\|WP_168862457.1\|6481621_6482983_-\|oxygen-independent-coproporphyrinogen-III-oxidase	gnl\|CDD\|236430	PRK09249, PRK09249, coproporphyrinogen dehydrogenase.	0
NZ_CP051204.1\|WP_168808597.1\|6483699_6484137_-\|hypothetical-protein	gnl\|CDD\|377555	pfam05751, FixH, FixH. This family consists of several Rhizobium FixH like proteins. It has been suggested that suggested that the four proteins FixG, FixH, FixI, and FixS may participate in a membrane-bound complex coupling the FixI cation pump with a redox process catalyzed by FixG.	1.68679e-18
NZ_CP051204.1\|WP_168808601.1\|6485557_6486634_-\|c-type-cytochrome	gnl\|CDD\|129864	TIGR00782, di-heme_cytochrome_cp, cytochrome c oxidase, cbb3-type, subunit III. This model describes a di-heme subunit of approximately 26 kDa of the cbb3 type copper and heme-containing cytochrome oxidase. [Energy metabolism, Electron transport].	4.06614e-27
NZ_CP051204.1\|WP_168808579.1\|6470129_6472994_-\|outer-membrane-beta-barrel-protein	gnl\|CDD\|379720	pfam14905, OMP_b-brl_3, Outer membrane protein beta-barrel family. This family includes proteins annotated as TonB dependent receptors. But it is also likely to contain other membrane beta barrel proteins of other functions.	2.39222e-28
NZ_CP051204.1\|WP_168808572.1\|6466401_6466947_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|224584	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis].	3.8287e-30
NZ_CP051204.1\|WP_168808593.1\|6480215_6481160_-\|UDP-3-O-(3-hydroxymyristoyl)glucosamine-N-acyltransferase	gnl\|CDD\|234858	PRK00892, lpxD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Provisional.	4.54888e-102
NZ_CP051204.1\|WP_168861764.1\|6473033_6473840_-\|GLPGLI-family-protein	gnl\|CDD\|273495	TIGR01200, conserved_hypothetical_protein, GLPGLI family protein. This protein family was first noted as a paralogous set in Porphyromonas gingivalis, but it is more widely distributed among the Bacteroidetes. The protein family is now renamed GLPGLI after its best-conserved motif.	4.33334e-15
NZ_CP051204.1\|WP_168808585.1\|6476316_6477345_+\|phenylalanine--tRNA-ligase-subunit-alpha	gnl\|CDD\|234780	PRK00488, pheS, phenylalanyl-tRNA synthetase subunit alpha; Validated.	0
NZ_CP051204.1\|WP_168808587.1\|6477519_6478368_+\|3-hydroxybutyryl-CoA-dehydrogenase	gnl\|CDD\|236211	PRK08268, PRK08268, 3-hydroxy-acyl-CoA dehydrogenase; Validated.	6.12073e-135
NZ_CP051204.1\|WP_168808595.1\|6482985_6483693_-\|sulfite-exporter-TauE/SafE-family-protein	gnl\|CDD\|372587	pfam13386, DsbD_2, Cytochrome C biogenesis protein transmembrane region.	2.98668e-43
NZ_CP051204.1\|WP_168808577.1\|6468659_6469556_-\|TIM-barrel-protein	gnl\|CDD\|226149	COG3622, Hfi, Hydroxypyruvate isomerase [Carbohydrate transport and metabolism].	1.0725e-27
NZ_CP051204.1\|WP_168861765.1\|6478458_6479436_+\|NAD-dependent-epimerase/dehydratase-family-protein	gnl\|CDD\|187539	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs. This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	6.13732e-92
NZ_CP051204.1\|WP_168808575.1\|6466940_6468401_-\|amino-acid-permease	gnl\|CDD\|129987	TIGR00909, putative_amino_acid_transporter, amino acid transporter. [Transport and binding proteins, Amino acids, peptides and amines].	8.00222e-124
NZ_CP051204.1\|WP_168808583.1\|6474030_6475470_+\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	5.44343e-47
NZ_CP051204.1\|WP_078670335.1\|6475605_6476292_+\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	9.50641e-63

>NZ_CP051204.1|WP_168808585.1|6476316_6477345_+|phenylalanine--tRNA-ligase-subunit-alpha
MEQLVQQIAAYKQEIAAFTPANAADLEQYRIKFLGTKGIVKALFGEMKQVPNDRKKEFGQILNEFKQLAEERYEAFAALKEAAGANHQEIDYTMPEAPHRLGTRHPISLVRNKIIRIFERLGFTIAEGPEIEDDWHNFTALNLPENHPARDMQDTFFVSKNPDWLLRTQTSSAQVRVMEQGKLPIRIISPGRVYRNETISARAHCFFHQVEGLYIDENVSFADLKQTLYHFVKEFFGENTGIRFRPSYFPFTEPSAEMDISCFICGGTGCSVCKQTGWVEILGCGMVHPKVLANCGIDPEKYTGFAFGMGIERITMLKYQIKDLRLFSENDTRFLEQFEGTV
>NZ_CP051204.1|WP_078670335.1|6475605_6476292_+|response-regulator-transcription-factor
MAKILLIEDEWQLGQIVKDSLETRGFEMLYAEDGKEGLRLYQQERPDVVVLDIMMPNMDGFTVTAEIRKQDKFTPIIFLTAKSQTADVVKGFELGGNDYLKKPFSMDELIVRIKALLKRFSDHPAVKEMEEGSVVIGQYIFNYAKQTLTRNNTTEFLSHREAEILRRLYDNKNEVMERKAVLMDLWGDDNFFNARSMDVFITKLRRYLKDDSRVQIVNIRGVGYKLIF
>NZ_CP051204.1|WP_168808583.1|6474030_6475470_+|HAMP-domain-containing-histidine-kinase
MRQRIRNILILMCSCILGIFLFQGYWVYNSYRIRQEQFSKEINDALRTAVFNKQFSDVHRQFPDMRSYRYYRAKDSARMVMLRINRHDGRHRHGPGDMPPGPLPPPDSIKGDVTARIYVDTLARQISEFLIAGNNRNDSANLRKLDSVFRAELHNRQIATPYQLDTFHMSYSGFERESFRDSIRKREPRQTSKIPFNPASNLFVQASFESPLQFILQKMLWTLVSSVALLVLTVLCFVYMLRTILKQKRLSEVKNDFINNMTHELKTPIATVSAAVEALQNFNALNDQRKTQTYLDISKNELQRLSDLVEKVLHIAAEEKEDFELFREETDLNEVIDNILTNHQLKATKVLQVRYDNKLTRPTVYVDKTHLSNAINNLVDNAIKYSGEQVQLYISCSEENGILKIRVRDNGIGIPRVYQENIFDKFFRVPTGDLHNVKGFGLGLSYVKKIVEMHGGTIRVHSEPDKGTEFTINIPLSRG
>NZ_CP051204.1|WP_168861764.1|6473033_6473840_-|GLPGLI-family-protein
MKGISRIIMSAALALPFSQPLLAQQSGTIVYEVTAKTDPERMRGFQRGGGDGDDAPQIPDVITFKQTLTFNNGHAKLATERPDFGNGGGRWGGRARRDTSNAPAQGPGPGQRRMGGMMGRGNTQYFDLANKKVIHVFSTFGEDRKTYYSEEDFIVAADTKTSEKTKKIAGYTCKKATVKLKDDTYTVWYTTELPFSFSPINGLLPEANAVVLVAEGGKRAFNASSVNLQAVTDTDLSIPAGAEKISQEQMRDIRQQEMEKLRKRQPQM
>NZ_CP051204.1|WP_168808579.1|6470129_6472994_-|outer-membrane-beta-barrel-protein
MKKIIQLLLVLSLGVICSQAQAQQGKIKGQLTDQSTREAMPAATVVLLHAKDSTVASTAITDNKGNFEITNIANGDYRLFISFLGYKAINKPVKITEETPSLTLGTLGMELKGVNLNAVEIKDEKPPIVVKKDTLEFNADAFKTRDNAVVEDLLKKLPGVTVDKDGAITAQGETVTKVYVDGKPFFGTDPKMATKNLPANIIDKVQIIDKKSDQAEFTKIDDGQTEKAINITIKKDKKKGLFGRASAGYGTDDRFSTAFNINRFRDNQQMSLIGGGNNINSTGYSVRDQMSFSPAGGGGGGGRGRGGRGGGGMIVTQGGGGGNANPGITRNWNAGLNFSEDFSKKVQFSGSYFFNDTKNNLAQQTSRQTFAGNSTTFYNENSASQTDNSNNRLDARVEYEIDSMHSLVFSPSYSLTNGNSFSSRDYQTLNNNKDTVNKGTTTNDGQGNNQNIGGSLLFRKRFKTPGRSLSLNLTYNTSINDQQNFNKSSVYYFANDSLSTFNQNNQINTTSKNAGANLTYTEPLGRDKYLEANYGFTNYKSDSKKYTYDYDEGKGIYDQLNDSLSNAFTNNTLNQQAGLAFRTTRLKYDYSIGLNVLFNNLDNTTYSFRTKRDSLIHQRTVNFAPNASFNYTFAKNKRLRINYNGNTQQPTVQQLQPVPDNSNALYVQEGNPDLKPSFNNTLRINYNQFNNTTFRGMFAMLRGSFGSNKIVNSTRLDTATGKTFSKPVNVNGYYSINGMLHNSIPLSRTPGQNLNTGTMIGYSRDVNMTQGVMNYKSTFQLTQSVNVSYMYKELFDAALGGSVNYNATSYTLPSTPNTQYFDYNFNADVNFNLPLGFMVGSDITCTLSRGRTAGYNLTSTMWNANISKYVFPKKQGMIRIQGFDLLRQYVAVSRDVSDNYIEDVRSNVLQQYFMVSFTYFLNKFGGNNKGNNAERGMRMMGPRGGQGGFRVNHF
>NZ_CP051204.1|WP_078669638.1|6469756_6470041_+|hypothetical-protein
MEKKYTPSLWLCILMDLIGCASYAVPVLGDVSDVIWAPISAIIFYRMFGGPVGTFGSAFNFLEELFPGTDFIPTFTVAWIVKRIWAGRRTVSMR
>NZ_CP051204.1|WP_168808577.1|6468659_6469556_-|TIM-barrel-protein
MHEENSRRDMIKKVATMALASTALSSLSERVAAHDKTVGEPLKGKINHSVCAWCYDDISLADLCVAAKKIGIPSIDLVDPKDFAVLKKHDMTCAMVASNGPEWGITRGFNNPAHHDKLETYFRHYIDETAKAGFSNLICFSGNRNGLSDEQGIANCTKGLQRIISYAEKKKVTLVMELLNSKVDHHDYQCDHTAWGVALCKSVGSENFKLLYDIYHMQIMEGDVIRNIRDHHQYIAHYHTGGVPGRHEIDETQELYYPAIMKAIHETGFKGYVAQEFIPSRPDKLASLNNAVHICDIA
>NZ_CP051204.1|WP_168808575.1|6466940_6468401_-|amino-acid-permease
MKQYYKKPLAWLLQESGEEGSHGLKRTLSGFQLVMLGLGVIIGAGLFSLTGLAAGNNAGPAVTISFVVAAVGCAFAGLCYAEFAAMIPVAGSAYTYAYTTMGEMLAWIIGWDLVLEFSVGAATVSISWSNYLVEFLAGYGIYLPPRLVHSPFETITLPGGEVVHGLFNLPAALVVILMSYILMRGTKGSAIWNAVVVSLKVGVVLVFIALGWKYVQPANLVPYIPKNTGELGHFGWSGILRGAGVVFFVFLGFDIVSTAAQETKNPKRNMPIGILGSLAICTVLFILFSHVMTGLAPYTEFKNSGAPVAIAISHTPFKWLGQLVVLAIIIGYTSVIMVDLWGQSRVFYSMSKDGLLPEIFSEIHPRFRTPWKSNILFCVFISIFAALVPIKVVGEMTSIGTLLAFVIVCAGVWILRYTMPDAPRPFKTPWVPFVPVMGILTCVGMMVFLPLDTWLRLIIWMAIGMVIYFCYGKKHSRVRRELNAGQ
>NZ_CP051204.1|WP_168808572.1|6466401_6466947_+|GNAT-family-N-acetyltransferase
MLDIPVNEDLYLRQLTMQDAPLVYKQLDASRKSLRKFLPWVDYNTNEEHSARFIQMMQRKAEEQEAIALGIWYQHHLCGVMDLHGWDHQVQKAEIGYWVGEAFQGKGIATAACRALITYAFKKLRLNKIEIRFVLQNERSGQIPIKLGFTREGILRHNAKLHGQYVDMVVMGVLRQDWKHY
>NZ_CP051204.1|WP_168861763.1|6465625_6466252_+|hypothetical-protein
MKKLGLILSGLVIMALAACSTKVTSSWRANNAQQLRKDQKIMVMALVPQKDRALRSQMEDFTVAEFRRKGYNAVSALQEFGPGEFMKMGEKQAVRKLQGSDVGQVLTIVMVDKGREKSYTPGYAYAPYGYWGFWPYYSRWYNTYYGPGYVTYSTRYQWEGNLYDLKSGQLLYSVQSQSFDPPSTARMAVLYAQQVVKDMTKRNLLAQN
>NZ_CP051204.1|WP_168808587.1|6477519_6478368_+|3-hydroxybutyryl-CoA-dehydrogenase
MIHSIAVCGAGTMGAGIAQVAASGGYKTVLFDIRPEGLERAQAQITKSLTTAVEKGRLKAEDKDAILERLTFTSDIHLCVADVIIEAIVEDMAAKTALFSQLAPINREDAIFVSNTSSLSVSQLAATLPHPQRVAGMHFFNPAHLMKLVEVVSGEQTSPEVAGRVYELARAMGKVPVRVKDAPGFIVNRVARHYYLEAMLLAEQRMADFSTIDQLLENAGFRMGPFALMDLIGNDINLAVTQSLYDAFQQAPRFRPNALQEQRVKDGRLGRKTGLGFYRYEQ
>NZ_CP051204.1|WP_168861765.1|6478458_6479436_+|NAD-dependent-epimerase/dehydratase-family-protein
MILVTGGTGFLGSYLIRSLVAAGKPVRALYRKAPSPRLQDLSGKIEWVQGDILDVCALEDAMQGVTQVYHCAAVVSFQPGHAAGLMKINVEGTANVVNLALDAGVKKLVYVSSVAAIGRAKEQAAIDEDCEWEDSPNNSRYSISKYQGEMEVWRGIAEGLDAVIVNPSIILGAGFWDEGSGTLLKNAWKEFPYYTEGVNGFVDVLDVVKAMVLLMDSPVSGERFILSAGNWGYRQLFTSMAHALGKKPPHIAAKPWMAELVWRLEKVKGLLTGKQPVITKETARTAQLKVYYDNQKILKALPEFTFRPLEETIREISAAFLASRN
>NZ_CP051204.1|WP_168861766.1|6479440_6480124_-|hypothetical-protein
MKKLLFPFLFLLSCTTAKKSTTTPTVHNLYSQAQEWPVKVNDGWLTAKTISFGLYSTTSRKNGVAETMGSFVKDPKTPFNFYVNGNDEHILVQTMNTTRIAFSNRDLPAVLKDLDGSTALSYTLINGTKNEPLKRWEMILKSPGYLELNNNKQAGILRCADTDIRITAHNRYGKVNSYEKVCYEFQYRGQPVAAVIAGDKPRVWVSKDAPAETAKTLAAAIGALLLK
>NZ_CP051204.1|WP_168808593.1|6480215_6481160_-|UDP-3-O-(3-hydroxymyristoyl)glucosamine-N-acyltransferase
MKFEAPVAVTEIAAFIGAELVGNSQLMATGLNEIHKVTPGDISFVDFEKYYNASLQSAATIIIINKKVECPEGKALLVLEDPFSAYVKLVNRFRPFEPASKAVSDSAVIGEGTIVQPNVFIGNHVRIGRNCLIHPNVTIYDHAVIGDNVIIHAGTVLGADAFYFKKRADREVIYDKLVSCGRVIIEDDVEIGAGCTIDKGVSGDTIIGRGTKLDNMIHIGHGTVIGKNCLIAAQVGIAGKAHIEDNVILWGQVGVNKDLTIGKGAVVLAQSGVPSSLEGGKVYFGYPAEVASEKRRELGWVKRIPEIWDKVKSL
>NZ_CP051204.1|WP_168862457.1|6481621_6482983_-|oxygen-independent-coproporphyrinogen-III-oxidase
MMDLIRKYNIAAPRYTSYPTVPYWDENTFNLPAWKTLLKKAFQATNHKDGISIYIHLPFCEKLCTYCGCNKHITVNHAVETPYIQTVLKEWELYVAAFEGRPRIREIHLGGGTPTFFSPENLMMLLQGIYRHATLLPDASLSFEGHPGNTTPEHLQTLYDLGFRRVSLGIQDFDPRVQEIINRLQPFEMVEKVVEHARKIGFTAINFDLIYGLPLQTACGMQDTVSKVMLLRPDRISFYSYAHVPWIKGVGQRRYTEADLPKDEEKRRLYELGKKLFARNGYTEIGMDHFALPGDELFIAAEKGELHRNFMGYTVSHTSLLVGLGASSIGDNGYGYVQNEKQVAAYQERVAGGEFPIVRGHILSDEDQLLKGHIRDLMCTFETSWRKADTQCDAVIEGLQRLQELERDGLVEVVKNSVKVTAQGRPFIRNICMAFDARLWRKLPESQLFSKAI
>NZ_CP051204.1|WP_168808595.1|6482985_6483693_-|sulfite-exporter-TauE/SafE-family-protein
MIGALILGFLGSFHCIGMCGPIALTLPVQHLDGVKKLAGILLYNAGRITTYALLGMIFGWVGRQLYLGGLQQWLSIGIGVLLLLIVLLQYTGIYRSKGGHLPGIYLSKIKSALGALLRQQRFSTLYGIGVLNGLLPCGLVYLAVAGAVATGATWKGSLFMAAFGAGTMPAMMTVTWFSHLVSIGVRNRIRALIPVAVGIMGILLILRGLNLGIPYISPVMSAHSEKVVERCCHKP
>NZ_CP051204.1|WP_168808597.1|6483699_6484137_-|hypothetical-protein
MNWGHKIIIVFVVFAAGILTLVTKSMRTKIDMVTKDYYAEELKYQQVIDGKKNAGALSAPVLIAQQSEGIAVTFPQELHGANITGKIKFYRPSDAGMDVEMPLRLSSGGTLMINRQLFHKGNYLVKVQWENGGKPFYQEENLHIN
>NZ_CP051204.1|WP_168808599.1|6484164_6485553_-|cytochrome-c-oxidase-accessory-protein-CcoG
MADSNTFRDSLATVDKQGKRNWIFAQQPKGRYYNIRSILSIFYFSVFFSLPFISINGRPLFLLNVVEGKFILFGAIFWPQDFFIFGLAMLAFILFIVLFTMAFGRLFCGWMCPQTIFMEMLFRRIEYWIEGDAAAQRMLAKQPWNTDKIIRKTAKHLVFYALSFLIANIFLAYIISAKTLGNIITAPLSEHTGGFIAILVFSGVFYGVFAFMREQICTIVCPYGRLQGVLLDKNSILVAYDYVRGEPRGKFRKDDARAIGDCIDCAQCVKVCPTGIDIRNGTQLECVNCTACIDACDHMMDKTGRARGLIRYASENGIAQKAPLRFTPRLRIYTGILTLLLGAIVFMLASRKPVSGTIMRTTGMLYQERGADSISNLYRIKLINKTTAEIPLQLKLEDEPGHVEVVGKSTITVKAEGQGEGTFFIIVPKAALHNRKSTLYIGLYEGDKRITRMRTTFLGPVQ
>NZ_CP051204.1|WP_168808601.1|6485557_6486634_-|c-type-cytochrome
MKRKLLYTLSGSLLCSLSALAGGPKPPSELKDPVALVLLTVIIGLVLVIAILGNAVVGAMDLYRERMKREAAKLPVILVLVTLSLAASLPAGATSPAPEASSYYTSLSQSSLYLLVSIVVLEIAVIISLLFVLRFLAGIKNKSKRRAAADAATPAKPRISWLEKINKTRTLDAASETEEDMGHDFDGIRELNNPTPPWWKWGFIFSICFGVVYFWRTEISHSAPNQLQELAMAEEKAAVAKAEYLKNAANNIDENNVKMMDNADDLAAGGKIFVASCAPCHGPQGQGVVGPNLTDDYWMHGGKINEVFKTIKYGVPDKGMKAWQEDFSPKQLAQLASYVKSIHGSNPPNPKEPQGVKE
>NZ_CP051204.1|WP_168808603.1|6486643_6486823_-|CcoQ/FixQ-family-Cbb3-type-cytochrome-c-oxidase-assembly-chaperone
MKFINYLESIAGVSIYPMASLLIFSIFFVFAAFWAFRADRNMVDQISRIPLDNDETQSL

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Crispr_ID: NZ_CP051204_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP051204_10

7653139-7653226

Orphan

Consensus_repeat	Method
ATATTTGGCGGGTTCTTAAACGGCAGGTCCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP051204_10

>merge|NZ_CP051204|10|7653139-7653226|CRISPRCasFinder
ATATTTGGCGGGTTCTTAAACGGCAGGTCCTAGAAATTTTGATATTTTGTTATTTTGATATTTGGCGGGTTCTTAAACGGCAGGTCCT

>NZ_CP051204|10|10|7653139-7653226|CRISPRCasFinder
ATATTTGGCGGGTTCTTAAACGGCAGGTCCT	AGAAATTTTGATATTTTGTTATTTTG
ATATTTGGCGGGTTCTTAAACGGCAGGTCCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP051204.1\|WP_168810392.1\|7654365_7655031_-\|ligase-associated-DNA-damage-response-endonuclease-PdeM	unknown	unknown	gnl\|CDD\|274996
NZ_CP051204.1\|WP_168810382.1\|7647977_7649354_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP051204.1\|WP_168810394.1\|7655050_7657501_-\|ligase-associated-DNA-damage-response-DEXH-box-helicase	unknown	unknown	gnl\|CDD\|274994
NZ_CP051204.1\|WP_012794455.1\|7652133_7652355_-\|DUF2795-domain-containing-protein	unknown	unknown	gnl\|CDD\|378655
NZ_CP051204.1\|WP_168862095.1\|7645733_7646828_+\|Nif3-like-dinuclear-metal-center-hexameric-protein	unknown	unknown	gnl\|CDD\|376614
NZ_CP051204.1\|WP_168862097.1\|7658875_7659907_-\|LD-carboxypeptidase	unknown	unknown	gnl\|CDD\|132882
NZ_CP051204.1\|WP_168862094.1\|7644177_7645689_-\|carboxypeptidase-M32	unknown	unknown	gnl\|CDD\|341054
NZ_CP051204.1\|WP_168862098.1\|7660114_7660672_-\|PorT-family-protein	unknown	unknown	gnl\|CDD\|372635
NZ_CP051204.1\|WP_168810403.1\|7660868_7661450_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051204.1\|WP_168862096.1\|7653369_7654272_-\|histone-deacetylase	unknown	unknown	gnl\|CDD\|212519
NZ_CP051204.1\|WP_168810396.1\|7657552_7658875_+\|NCS2-family-permease	unknown	unknown	gnl\|CDD\|225161
NZ_CP051204.1\|WP_168810407.1\|7662095_7662587_-\|Lrp/AsnC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224439
NZ_CP051204.1\|WP_168862099.1\|7662707_7664099_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340879
NZ_CP051204.1\|WP_168810381.1\|7646831_7647584_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224495
NZ_CP051204.1\|WP_168810386.1\|7651156_7651972_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187630
NZ_CP051204.1\|WP_168810405.1\|7661446_7662052_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051204.1\|WP_168810366.1\|7643060_7643855_-\|DUF4382-domain-containing-protein	unknown	unknown	gnl\|CDD\|379555
NZ_CP051204.1\|WP_168810364.1\|7642311_7642998_+\|thioredoxin-fold-domain-containing-protein	unknown	unknown	gnl\|CDD\|238089
NZ_CP051204.1\|WP_168810384.1\|7649393_7651040_+\|DNA-repair-protein-RecN	unknown	unknown	gnl\|CDD\|223571
NZ_CP051204.1\|WP_168810388.1\|7652455_7653106_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213222

Protein	Function_ID	Function_description	E-value
NZ_CP051204.1\|WP_168810392.1\|7654365_7655031_-\|ligase-associated-DNA-damage-response-endonuclease-PdeM	gnl\|CDD\|274996	TIGR04123, hypothetical_protein, metallophosphoesterase, DNA ligase-associated. Members of this protein family are an uncharacterized putative metallophosphoesterase associated with a DNA ligase, a helicase, and a putative exonuclease. It may play a role in DNA repair. Its system is present in about 12 % of prokaryotic reference genomes.	9.75438e-83
NZ_CP051204.1\|WP_168810382.1\|7647977_7649354_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	0.00332517
NZ_CP051204.1\|WP_168810394.1\|7655050_7657501_-\|ligase-associated-DNA-damage-response-DEXH-box-helicase	gnl\|CDD\|274994	TIGR04121, ATP-dependent_helicase, DEXH box helicase, DNA ligase-associated. Members of this protein family are DEAD/DEAH box helicases found associated with a bacterial ATP-dependent DNA ligase, part of a four-gene system that occurs in about 12 % of prokaryotic reference genomes. The actual motif in this family is DE[VILW]H.	0
NZ_CP051204.1\|WP_012794455.1\|7652133_7652355_-\|DUF2795-domain-containing-protein	gnl\|CDD\|378655	pfam11387, DUF2795, Protein of unknown function (DUF2795). This family of proteins has no known function.	1.2831e-13
NZ_CP051204.1\|WP_168862095.1\|7645733_7646828_+\|Nif3-like-dinuclear-metal-center-hexameric-protein	gnl\|CDD\|376614	pfam01784, NIF3, NIF3 (NGG1p interacting factor 3). This family contains several NIF3 (NGG1p interacting factor 3) protein homologs. NIF3 interacts with the yeast transcriptional coactivator NGG1p which is part of the ADA complex, the exact function of this interaction is unknown.	6.09229e-50
NZ_CP051204.1\|WP_168862097.1\|7658875_7659907_-\|LD-carboxypeptidase	gnl\|CDD\|132882	cd07025, Peptidase_S66, LD-Carboxypeptidase, a serine protease, includes microcin C7 self immunity protein. LD-carboxypeptidase (Muramoyltetrapeptide carboxypeptidase; EC 3.4.17.13; Merops family S66; initially described as Carboxypeptidase II) family also includes the microcin c7 self-immunity protein (MccF) as well as uncharacterized proteins including hypothetical proteins. LD-carboxypeptidase hydrolyzes the amide bond that links the dibasic amino acids to C-terminal D-amino acids. The physiological substrates of LD-carboxypeptidase are tetrapeptide fragments (such as UDP-MurNAc-tetrapeptides) that are produced when bacterial cell walls are degraded; they contain an L-configured residue (L-lysine or meso-diaminopimelic acid residue) as the penultimate residue and D-alanine as the ultimate residue. A possible role of LD-carboxypeptidase is in peptidoglycan recycling whereby the resulting tripeptide (precursor for murein synthesis) can be reconverted into peptidoglycan by attachment of preformed D-Ala-D-Ala dipeptides. Some enzymes possessing LD-carboxypeptidase activity also act as LD-transpeptidase by replacing the terminal D-Ala with another D-amino acid. MccF contributes to self-immunity towards microcin C7 (MccC7), a ribosomally encoded peptide antibiotic that contains a phosphoramidate linkage to adenosine monophosphate at its C-terminus. Its possible biological role is to defend producer cells against exogenous microcin from re-entering after having been exported. It is suggested that MccF is involved in microcin degradation or sequestration in the periplasm.	1.51645e-104
NZ_CP051204.1\|WP_168862094.1\|7644177_7645689_-\|carboxypeptidase-M32	gnl\|CDD\|341054	cd06460, M32_Taq, Peptidase family M32, which includes thermostable carboxypeptidases TaqCP, PfuCP and FisCP. Peptidase family M32 is a subclass of metallocarboxypeptidases, distributed mainly in bacteria and archaea, whose members contain a HEXXH motif that participates in coordinating a divalent cation such as Zn2+ or Co2+. It includes the thermostable carboxypeptidases (E.C. 3.4.17.19) from Thermus aquaticus (TaqCP) and Pyrococcus furiosus (PfuCP), which have broad specificities toward a wide range of C-terminal substrates that include basic, aromatic, neutral and polar amino acids. These enzymes have a similar fold to the M3 peptidases such as neurolysin and the M2 angiotensin converting enzyme (ACE). The keratin-degrading extremophilic eubacterium Fervidobacterium islandicum M32 carboxypeptidase (FisCP) plays an important role in cellular metabolism, and significantly enhances the degradation of native chicken feathers. It has been shown to mainly cleave the C-termini of peptides with a basic amino acid sequence. Novel M32 peptidases from some eukaryotes: protozoa Trypanosoma cruzi, a causative agent of Chagas' disease, and Leishmania major, a parasite that causes leishmaniasis, have been identified, thus making these enzymes an attractive potential target for drug development against these organisms.	0
NZ_CP051204.1\|WP_168862098.1\|7660114_7660672_-\|PorT-family-protein	gnl\|CDD\|372635	pfam13568, OMP_b-brl_2, Outer membrane protein beta-barrel domain. This domain is found in a wide range of outer membrane proteins. This domain assumes a membrane bound beta-barrel fold.	3.486e-17
NZ_CP051204.1\|WP_168862099.1\|7662707_7664099_+\|MFS-transporter	gnl\|CDD\|340879	cd17321, MFS_MMR_MDR_like, Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This family is composed of bacterial, fungal, and archaeal multidrug resistance (MDR) transporters including several proteins from Bacilli such as methylenomycin A resistance protein (also called MMR peptide), tetracycline resistance protein (TetB), and lincomycin resistance protein LmrB, as well as fungal proteins such as vacuolar basic amino acid transporters, which are involved in the transport into vacuoles of the basic amino acids histidine, lysine, and arginine in Saccharomyces cerevisiae, and aminotriazole/azole resistance proteins. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, MMR confers resistance to the epoxide antibiotic methylenomycin while TetB resistance to tetracycline by an active tetracycline efflux. MMR-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.01033e-41
NZ_CP051204.1\|WP_168862096.1\|7653369_7654272_-\|histone-deacetylase	gnl\|CDD\|212519	cd09993, HDAC_classIV, Histone deacetylase class IV also known as histone deacetylase 11. Class IV histone deacetylases (HDAC11; EC 3.5.1.98) are predicted Zn-dependent enzymes. This class includes animal HDAC11, plant HDA2 and related bacterial deacetylases. Enzymes in this subfamily participate in regulation of a number of different processes through protein modification (deacetylation). They catalyze hydrolysis of N(6)-acetyl-lysine of histones (or other proteins) to yield a deacetylated proteins. Histone deacetylases often act as members of large multi-protein complexes such as mSin3A or SMRT/N-CoR. Human HDAC11 does not associate with them but can interact with HDAC6 in vivo. It has been suggested that HDAC11 and HDAC6 may use non-histone proteins as their substrates and play a role other than to directly modulate chromatin structure. In normal tissues, expression of HDAC11 is limited to kidney, heart, brain, skeletal muscle and testis, suggesting that its function might be tissue-specific. In mammals, HDAC11 proteins are known to be involved in progression of various tumors. HDAC11 plays an essential role in regulating OX40 ligand (OX40L) expression in Hodgkin lymphoma (HL); selective inhibition of HDAC11 expression significantly up-regulates OX40L and induces apoptosis in HL cell lines. Thus, inhibition of HDAC11 could be a therapeutic drug option for antitumor immune response in HL patients.	1.4288e-137
NZ_CP051204.1\|WP_168810396.1\|7657552_7658875_+\|NCS2-family-permease	gnl\|CDD\|225161	COG2252, COG2252, Xanthine/uracil/vitamin C permease [Nucleotide transport and metabolism].	1.09576e-156
NZ_CP051204.1\|WP_168810407.1\|7662095_7662587_-\|Lrp/AsnC-family-transcriptional-regulator	gnl\|CDD\|224439	COG1522, Lrp, Transcriptional regulators [Transcription].	1.4797e-42
NZ_CP051204.1\|WP_168810381.1\|7646831_7647584_+\|hypothetical-protein	gnl\|CDD\|224495	COG1579, COG1579, Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only].	5.40017e-26
NZ_CP051204.1\|WP_168810386.1\|7651156_7651972_+\|SDR-family-oxidoreductase	gnl\|CDD\|187630	cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP) reductase (ENR), divergent SDR. This bacterial subgroup of ENRs includes Escherichia coli ENR. ENR catalyzes the NAD(P)H-dependent reduction of enoyl-ACP in the last step of fatty acid biosynthesis. De novo fatty acid biosynthesis is catalyzed by the fatty acid synthetase complex, through the serial addition of 2-carbon subunits. In bacteria and plants,ENR catalyzes one of six synthetic steps in this process. Oilseed rape ENR, and also apparently the NADH-specific form of Escherichia coli ENR, is tetrameric. Although similar to the classical SDRs, this group does not have the canonical catalytic tetrad, nor does it have the typical Gly-rich NAD-binding pattern. Such so-called divergent SDRs have a GXXXXXSXA NAD-binding motif and a YXXMXXXK (or YXXXMXXXK) active site motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	5.33462e-88
NZ_CP051204.1\|WP_168810366.1\|7643060_7643855_-\|DUF4382-domain-containing-protein	gnl\|CDD\|379555	pfam14321, DUF4382, Domain of unknown function (DUF4382). This family is found in bacteria and archaea, and is typically between 142 and 161 amino acids in length.	1.90406e-46
NZ_CP051204.1\|WP_168810364.1\|7642311_7642998_+\|thioredoxin-fold-domain-containing-protein	gnl\|CDD\|238089	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and certain stress proteins such as senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions (no active site cysteine) are also seen in dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases, where they are believed to play a regulatory role in multidomain proteins.	1.22989e-25
NZ_CP051204.1\|WP_168810384.1\|7649393_7651040_+\|DNA-repair-protein-RecN	gnl\|CDD\|223571	COG0497, RecN, ATPase involved in DNA repair [DNA replication, recombination, and repair].	2.66309e-158
NZ_CP051204.1\|WP_168810388.1\|7652455_7653106_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	1.35322e-110

>NZ_CP051204.1|WP_168810388.1|7652455_7653106_+|ABC-transporter-ATP-binding-protein
MLTARNVTKNYSNLPILKGVDITVSKGEIVTIVGSSGAGKSTLLHILGTLDQPTQGEVWLNNVNLTGLSGNALADFRNRHIGFIFQFHHLLPEFSALENVCVPGFIAGTRKSEVKEKAAFLLKTLGLGHRLEHKPSALSGGEQQRVAVARALINNPDVVMADEPTGNLDSQNARELHNMFLQLRDQFQQTFIIVTHNEELAPLSDRQLLMKDGRII
>NZ_CP051204.1|WP_012794455.1|7652133_7652355_-|DUF2795-domain-containing-protein
MYWTLELASYLEDAPWPATKDELIDYAIRSGAPIEVIENLQELEDEGEIYEGIEDIWSDYPSQDDFFFNEDEY
>NZ_CP051204.1|WP_168810386.1|7651156_7651972_+|SDR-family-oxidoreductase
MAHNLLKGKKGIIFGALDEKSLAWRTALRCVEEGAEIVLTNAPVALRMGEINKLAEICKAPVIPADVTITDDLKNLFTKSMEHFGGKIDFVLHSVGMSLNVRKGRQYTDLDYDFSLKTLNISALSLHRVLQTAYQMDAINEWGSVVALTYIAAQRAFPDYSEMADAKAMLESVARSFGYHYGIKNKVRVNTVSQSPTPTTAGSGVKGFGGFIGYAEKMSPLGNATADNCADYLVTLFSDMTRMVTMQNLYHDGGFSFTGVSNAIMDALDKE
>NZ_CP051204.1|WP_168810384.1|7649393_7651040_+|DNA-repair-protein-RecN
MLQRLIIKNYAIIDHLEVDFSGNLNVITGETGAGKSILLGALSMILGERADPGVLFDKTGKCVIEGIFKVKKSQVAAFFQQHELDLEDPLIIRREISAAGKSRAFVNDTPVNISQLSELSGYLVDLHQQFDTLELGNADFQREVIDALAKPAALQVYHHLFLQYLQVQKKYKQLQDDRDQANKELDYNRFLLDELLEADFSPNEVEELDNELQLLTHAEEIKNTLNRVFFQLKEDEQPILQQLKQLQSSIQHISSFHKDMPAVSERMLSAYLELQDIAGEVDNINDQVHYDAQRIEQVNERMALGYRLFKKHGVQTTDELLAIKDTLTAKVDGVLNLDEQLAALEKEQAQLHEALMKDAAAITAERQEQVAPFEKKVNTLLAQVGMPNARLKVDIIQGELNPYGQDTIEFLFDANRSNQFAPVGKVASGGELSRLMLCIKSLVAQSVALPTLIFDEIDTGISGEAARQVGVILKDLAKAHQIICITHQPQIAGKADAHYFVYKDARAEKVTTSVRLLSMDERIDKIAQMLSGERPTAAALENAREMVR
>NZ_CP051204.1|WP_168810382.1|7647977_7649354_+|tetratricopeptide-repeat-protein
MELRLNAGKALLEAEKKENPDNLVPYFLDNYADFFPLFFNEDPAEYARKRGMRAVRLDKMLEGSPDSPYYLYTQAAIKFQWAMVKIKFNEKWDATWEIRKAYMTLKENQRRFPDFVPNRLLLGAMQTVFGTIPEGYKWITNILGMKGSIHQGMENVNAFIESNAPEAKLFREESYYYYCYLMLFIVNKPEDTWAFLQKKQLDTKNNYLYALMVANLSLNNQKAATGIRVLEEKHDGNEYADIEYYNYVFGLLKLTRLDSDAHVYLERFVNEFKGKFYVKECLQRLSWFYYLEGNQAMANKYRNMILNRGGTETDADKQALKEAEGGKWPNPFLLKVRLQSDGGFFNEALKLLLTKKASDFPAMEDKLEYAYRLGRIYDETGQDDKAVTMYEVTIKVGANRPEYYAARASLQLGYIYEKRKDKTKAVQCYQQCLNMKGHDYKNSLDQRAKAGIQRVNGS
>NZ_CP051204.1|WP_168810381.1|7646831_7647584_+|hypothetical-protein
MATVKEYSVEEKLASVLKLQKIDSKLDEIQVLKGELPIEVKDLEDEIEGLNTRQSHIENEIKGIQDFVASKKTAIKDAEALIKKYEKQQDNVKNNREFEAITKEMEMQSLEIKLAEKHIKDANEEIKEKSRTLEVAKKAIADKEANLKHKKGELEKIVAETEKEEKAFRKESEDAKAKVDPRLLAAYEKIRKNYRNGLAVVTVERDSCGGCYNAIPPQRQAEIRQHKKIIVCEHCGRILVDNDLEATVTI
>NZ_CP051204.1|WP_168862095.1|7645733_7646828_+|Nif3-like-dinuclear-metal-center-hexameric-protein
MKIKEIIQVLEAYAPLPYQESYDNAGLIFGDPSWEVTNVLLTLDATEAVIDEAIARGCNLVVAHHPIVFGGLKKINGRSYVERVAIKAIKHDVAVYAAHTNLDNVRNGVCAQMAGRLGLERCRVLQPKTGLLKKLYTFVPADDAEKVRAALFTAGAGHIGNYSECSFNAEGQGTFKGGAGTDPYVGTPGERHFEREIKLEVIFPVYLESGIIQALLASHPYEEVAYDVVTLDNVYQQVGSGLVGELPEAMEEQAFLAWVKQQFQTGCVRYTPLKGRPVKKVALCGGAGSFLLKRAIAAGADAYISADFKYHEFFDADNQIVIADVGHFESEQFTVELFYHILTEKFRNFAPLKSTIKTNPVNYL
>NZ_CP051204.1|WP_168862094.1|7644177_7645689_-|carboxypeptidase-M32
MTGSKSTAEQYTGYQSKMQKIADVRNAMAVLGWDQETYLPEKGAAFRGQQLTTLSGIAHELFTEEALGDLLRQLHHHKELDALQQKNIALSLEDYDKNKKYPASFVAEMSNTTNECYHAWIKARKANDYSIFAPALSRMITLKKQETTILGYEGHPYNALLNEYEKGATTTMLDKIFEDVKKALSPLLAKIESRPQVDKDFLLLHYNRDKQWQLGIDLLKDMGYDLQAGRQDISEHPFTTSFNPHDVRVTTRIDENDFGNMTWSCIHEGGHALYEQGLPAEQYGLPCGEATSLGIHESQSRLWENNVGRSLNFWKHHYAHVQQLFPENLGNVPLRNFYQAINQVKPSLIRTEADELTYHFHIMIRYEIEKGLMDGSIPVNDLRQVWNEYYQKYLHVNVPDDAQGVLQDIHWSHGSFGYFPTYSLGSFYAAQFFTTAQKQVPGLDDAISRGNYHSLLEWLRTHIHPFGRFYTSNELCKKVTGQELQFSYFLDYAEKKYADIYNW
>NZ_CP051204.1|WP_168810366.1|7643060_7643855_-|DUF4382-domain-containing-protein
MKNRIWAFIVAMPALALLFTACNKNDSDNNSGKAKMTVYLTDAPADYDAVNVDIQDVQVNASNSDNGWQSIHLLRPGVYNLLNFRNGLDTVLASQELPAGEISQIRLVLGSNNSVVIDGNTYPLTTPSAQQSGLKLNVHATLTAGIEYRLWLDFDAARSVVTTGSNKYILKPVIRTYTQATGGTIKGIALPLLHVSGVYAIQNADTIAAAKPDPLTGAYLIAGLNAGAYNLAIAGDSTVRDTLITNVNVTTGQVTIVNPVTLLP
>NZ_CP051204.1|WP_168810364.1|7642311_7642998_+|thioredoxin-fold-domain-containing-protein
MYRFLMAALLMCTGGVLQAQQPQQEDAKTFAKDIQQPGVQVFDVRTAAEYSTGHLPNALQADYTNKAEFNERVKYLDKQKPVYIYCLSGGRSTKAAQWMRENGFSKVVELENGVSAWKQAGLPLDGVNAKKPQLTVDAYTKSIADGVVLTDVGAEWCPPCKQLEPVLKAFLQSHPKVRLQKVDGGNDTDVMKAIGAKGLPTLIVYKNGKEVWRKQGVATAEELAAAVK
>NZ_CP051204.1|WP_168862096.1|7653369_7654272_-|histone-deacetylase
MKIAYHEIYAHPLPADHRFPMVKYELIPAQLLREGVISHEQLFAPEAAAEEAILATHTLPWWEKLRDQTLSDREQRHIGFRQSPLLTQREIVIAQGTIDIALHALDHGIGFNVAGGTHHAFADRGEGFCLLNDFAIAANYLLQQKKVKKVLVADLDVHQGNGTAALFAGNDRVFTFSMHGAHNYPFHKETSDLDIPLPDGMTDSPYLQLLEETLPRLIEKEKPDIVCYLSGVDVLETDRFGKLKVTAAGCRQRDEIVFSLLHKHGIPCAVAMGGGYSARISDIVNAHCNTFRTGLNIYGF
>NZ_CP051204.1|WP_168810392.1|7654365_7655031_-|ligase-associated-DNA-damage-response-endonuclease-PdeM
MQNKDHAAGEIFRFKQQHWHLLPEKAIYWEEEKALILSDLHLGKSAHFRKAGIAVPAGIMQEDLFRLQQLITRYLPVRLIIVGDMFHSRHNNEVQYFKIWRGQFSHIRVDLVLGNHDIMADEIYSQLEVNTHDTLTVRNIHFIHEPCGENNGYLYTFSGHLHPAVVMAGPARQRLRLPCFYFGRYCGILPAFGDFTGLANLDPYPDESVFVIAGKSIIRTQ
>NZ_CP051204.1|WP_168810394.1|7655050_7657501_-|ligase-associated-DNA-damage-response-DEXH-box-helicase
MQQRSRGWKVITGWLADKDLQPFKFQEDAWEAYLEGRSGIVNAPTGFGKTFSLFLGAVIAWIDAHPKDYQKKTKNGLQLLWVTPLRALAKDLGRAMEEVLRELDIPWEVGIRSGDTPVATRARQKLQMPEILIITPESLHLLLAQKEYPSVFRHLHTVVVDEWHELLGSKRGVMAELALSRLRGLRPTLKVWGISATIGNLDEALEVLLGPYHNGGLIVRANLKKNIALQSVIPHEIENYPWAGHLGIRMLPQALPIINNSQTTLVFTNTRSQSEIWYQSLLKHEPMLAGALALHHGSIDMELRIWVEEALHNGILKAVVCTASLDLGVDFRPVDTVIQVGSPKGVARFLQRAGRSGHQPGAISRIFFLPTHALELVEAAALKAAMEEELIESRMPVLLAYDVLLQYLMTLAVSDGFHAPQIYEEVRKTFCYQDLTEDEWQWILAFLTTGGDALGSYDEFRKLERQGDHYYCKSRMLAMRHRLHIGTIVSDAMLKVKFMTGGYVGVIEESFISRLSPGDSFTLAGRNLEFVMIKDMTVLVRKSGAKRTIVPSYQGGRIPLSSNLGRMLRRKFNEALSRRTKDPELIALQPLFNRQEELSHIPKDNELLIEKITTKDGYHLFVYPFEGRLVHEVMAALLAYRISRIQPITFSIAMNDYGFELLSDQPIPLTTENAKALFTTDNLLTELQTSVNATEMARRKFRDIAVIAGLIFQGYPGKHKANRHLQSSASLLFNVFKDYDPQNLLLKQAFNEAFFYQMEEARLRETLERIAQSRIVITEPDKLTPFCFPIKVDSLRDTMTSEKLEDRIKKLIAVNE
>NZ_CP051204.1|WP_168810396.1|7657552_7658875_+|NCS2-family-permease
MLAKFFRLSENNTTVKKEVLAGLTTFSTMAYILAVNPSILSTTGMDFNALITATALAAAIGTLVMALYARLPIGVAPGMGLNAFFAYTIVSGMGYSWQFALTAVFLEGIIFIILSMFRIREAIINSIPENLKHAISVGIGLLIALIGMANAGIIETGMHHAGEGRLEGVILKMGNVTSIGPLIALIGLIVSAVLMYRKVNAALLIGILAATMAGIPLGITHLPEGHLVSLPPSVAPIAFKLEFDRIFSLDMLMILFTLLMVNLFDTVGTLIGLCNKAGLLDENGRLPRAKQALMADAVGTTAAGLLGTSVVTAYVESASGVAAGGRTGLTALTVSFMFLLSLFFAPVFAMIPQAATAPALIIVGMLMMGAVVKIDFNDVTEALPAFLAIVMMPYTYSIAEGIVFGMLSYVLLKVLTGRYKQISPVMYVLAILFVVTFLVK
>NZ_CP051204.1|WP_168862097.1|7658875_7659907_-|LD-carboxypeptidase
MNRKHFLSALATIGISLPATQTLAAIGTTDTDAAKEPQIPPYLKPGDIIGITCPAGYINREEILPSLRIMEKWGFNIRIGNTVGMRDYSFGGTDTERAKDLQAMLNDPNVKAIMCGRGGYGSARILDHLDFSRFHRHPKWIIGFSDITALHCHVNRHYGIATIHSKMCNSFPDDFNNAEPEIQDTIMSIYQALTGKKMQYTAPPDANNRKGTARGILIGGNLSVIQSISGTNSEIDTNGKILFLEEVGEYLYNIDRMLNTLQRSHKLDNLAGLIIGGFNRLKPDDPGEEFGRTVYDMVQEKVKAFKYPVCYNFPTGHQKNNYALKCGMMHTLTVTDEKVLLKD
>NZ_CP051204.1|WP_168862098.1|7660114_7660672_-|PorT-family-protein
MRKTLFVLLAVMSVTVGTYAQKKVHYGLKGGLNISNSTALFDYFRTGVYAGAFAEIKLKERWAIQPEVVYYRNSGQGGYHIITDRKEHYLSVPVMIKYYITPKFYLEAGPELNYVLSANETVEGLTYNNIDLYNRWGLSGSAGLGYQLPYGFGVNARYSYSVPVKAYFPAVYNNTGKIGMTYTFK
>NZ_CP051204.1|WP_168810403.1|7660868_7661450_+|hypothetical-protein
MRCLLALTGLLFITTAVSAQQEAWRIVPGESIGHVKLEMPANELASLGKPDTGDAAMMKAWRIWYGRRKDGSVDSAAVLAVFTAMRTQDTQYVKEVRVTSRRFRTAENVGAGSAMTAVRKAYPNLKLVKVYASKNRSRRIEVYDDEKLGIAFETASARRRAICSMVVVHTPGEAPGSYLDYHIGFDNLLPVTR
>NZ_CP051204.1|WP_168810405.1|7661446_7662052_-|hypothetical-protein
MLKLYTGLYALCLFLTALPASSQSACFAHSIGAGLYSGDNHFAGGVIYSPRFNFGILSPRSAFAIGTQLALGGNLRASYSRYSEGNSTSFFMADVPLFLTYNYGNFATTQSHTKLGLFTGAGYGFHNGSRNVENTEDDENTNDQVHVSGFAFTTGCRFMIGHTSLGLHFSYLFNNNNYNPDIPGIGSAGLSYNIHSGRKVF
>NZ_CP051204.1|WP_168810407.1|7662095_7662587_-|Lrp/AsnC-family-transcriptional-regulator
MDHKKEQELPALTLDDKDMGILRLLQQDAKMTIRDIARQLNLSTTPVYERIRKMEQAGVIRQYAAIVDPRKINKGMTVLVYITLKEHNKKNGKKFIQEIVAFQEVTECLNISGEFDFMIKVQVKDMDEYREFYVNKLGELDNLSHTQSIFVISVIKETHQVVY
>NZ_CP051204.1|WP_168862099.1|7662707_7664099_+|MFS-transporter
MEKRIILTVACMAIFFEALDVSVLNMALPGMQTYFHFGPDAIQWVQTVYVLMYAGFVLLGGRLSDTMGRRKIFITGAILFVLASLGAGFSMSFAWLLTCRGLQGLGVALAIPAAMAIISHTFTVPAEKNRAFGIFGAMAGIGFATGLAIGGLISAWMGWQWVFFINVPVIGVAILLAYRFIPHDQQPAVKQDSNLLSGVLITLLLMLTAWLIHDLGHIAAHPAGFGLLLVALLTAGIYFVKRERVHASPLVDFDLFRLKGVITGNIGATLLGSTFLPYIFLLTLYLQEVLGFSSSTAGLLLFPFSILSGLISKYMLPHLFHRLGVTRTGIAGSCFMLAGILFFALSYFTAWHLPFMLLAVLCINSLGMSITFPAITILAIQEVPEAQHGLASGINGTCNAMGGGLGLSLVGLMMQLAVVNQWNSYAAGLAVLALIATGAILQLYRFWWRQSAATAGQLVKIPS

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP051204_10	10.1\|7653170\|26\|NZ_CP051204\|CRISPRCasFinder	7653170-7653195	26	NZ_CP051204.1	7653105-7653130	1	0.962
NZ_CP051204_10	10.1\|7653170\|26\|NZ_CP051204\|CRISPRCasFinder	7653170-7653195	26	NZ_CP051204.1	6809877-6809902	1	0.962
NZ_CP051204_10	10.1\|7653170\|26\|NZ_CP051204\|CRISPRCasFinder	7653170-7653195	26	NZ_CP051204.1	6809791-6809816	2	0.923

1. spacer 10.1|7653170|26|NZ_CP051204|CRISPRCasFinder matches to position: 7653105-7653130, mismatch: 1, identity: 0.962

agaaattttgatattttgttattttg	CRISPR spacer
agaaattttgatattttgatattttg	Protospacer
****************** *******

2. spacer 10.1|7653170|26|NZ_CP051204|CRISPRCasFinder matches to position: 6809877-6809902, mismatch: 1, identity: 0.962

agaaattttgatattttgttattttg	CRISPR spacer
agaaattttgatatttggttattttg	Protospacer
**************** *********

3. spacer 10.1|7653170|26|NZ_CP051204|CRISPRCasFinder matches to position: 6809791-6809816, mismatch: 2, identity: 0.923

agaaattttgatattttgttattttg	CRISPR spacer
aggaattttgatatttggttattttg	Protospacer
**.************* *********

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP051204_10	10.1\|7653170\|26\|NZ_CP051204\|CRISPRCasFinder	7653170-7653195	26	NZ_KT754167	Shigella dysenteriae 1 strain 69-3818 plasmid p69-3818, complete sequence	16542-16567	4	0.846
NZ_CP051204_10	10.1\|7653170\|26\|NZ_CP051204\|CRISPRCasFinder	7653170-7653195	26	NZ_CP026770	Shigella flexneri Y strain 93-3063 plasmid unnamed2	13921-13946	4	0.846
NZ_CP051204_10	10.1\|7653170\|26\|NZ_CP051204\|CRISPRCasFinder	7653170-7653195	26	NZ_CP026770	Shigella flexneri Y strain 93-3063 plasmid unnamed2	13929-13954	4	0.846
NZ_CP051204_10	10.1\|7653170\|26\|NZ_CP051204\|CRISPRCasFinder	7653170-7653195	26	NZ_CP028875	Borreliella bavariensis PBi plasmid lp28-4_cp32-1, complete sequence	30600-30625	4	0.846
NZ_CP051204_10	10.1\|7653170\|26\|NZ_CP051204\|CRISPRCasFinder	7653170-7653195	26	NZ_CP014494	Escherichia coli strain MVAST0167 plasmid pMVAST0167_2, complete sequence	8038-8063	4	0.846
NZ_CP051204_10	10.1\|7653170\|26\|NZ_CP051204\|CRISPRCasFinder	7653170-7653195	26	NC_032099	Shigella dysenteriae 1 strain 92-9000 plasmid p92-9000, complete sequence	112949-112974	4	0.846
NZ_CP051204_10	10.1\|7653170\|26\|NZ_CP051204\|CRISPRCasFinder	7653170-7653195	26	NZ_CP053953	Bacillus cereus strain FDAARGOS_798 plasmid unnamed2, complete sequence	111176-111201	4	0.846
NZ_CP051204_10	10.1\|7653170\|26\|NZ_CP051204\|CRISPRCasFinder	7653170-7653195	26	NZ_CP026778	Shigella dysenteriae strain 69-3818 plasmid unnamed1	91611-91636	4	0.846
NZ_CP051204_10	10.1\|7653170\|26\|NZ_CP051204\|CRISPRCasFinder	7653170-7653195	26	NZ_CP053950	Bacillus cereus strain FDAARGOS_799 plasmid unnamed2, complete sequence	5423-5448	4	0.846
NZ_CP051204_10	10.1\|7653170\|26\|NZ_CP051204\|CRISPRCasFinder	7653170-7653195	26	NZ_CP029156	Clostridioides difficile strain CD161 plasmid unnamed2, complete sequence	16472-16497	4	0.846
NZ_CP051204_10	10.1\|7653170\|26\|NZ_CP051204\|CRISPRCasFinder	7653170-7653195	26	NZ_CP029153	Clostridioides difficile strain CDT4 plasmid unnamed1, complete sequence	10516-10541	4	0.846
NZ_CP051204_10	10.1\|7653170\|26\|NZ_CP051204\|CRISPRCasFinder	7653170-7653195	26	NZ_CP020425	Clostridioides difficile strain FDAARGOS_267 plasmid unnamed1, complete sequence	30278-30303	4	0.846
NZ_CP051204_10	10.1\|7653170\|26\|NZ_CP051204\|CRISPRCasFinder	7653170-7653195	26	NZ_CP011969	Clostridioides difficile ATCC 9689 = DSM 1296 plasmid unnamed, complete sequence	25600-25625	4	0.846
NZ_CP051204_10	10.1\|7653170\|26\|NZ_CP051204\|CRISPRCasFinder	7653170-7653195	26	NZ_CP026770	Shigella flexneri Y strain 93-3063 plasmid unnamed2	13913-13938	5	0.808
NZ_CP051204_10	10.1\|7653170\|26\|NZ_CP051204\|CRISPRCasFinder	7653170-7653195	26	CP053591	Aquimarina sp. TRL1 plasmid unnamed, complete sequence	1781-1806	5	0.808
NZ_CP051204_10	10.1\|7653170\|26\|NZ_CP051204\|CRISPRCasFinder	7653170-7653195	26	NC_018689	Bacillus thuringiensis MC28 plasmid pMC429, complete sequence	155017-155042	5	0.808
NZ_CP051204_10	10.1\|7653170\|26\|NZ_CP051204\|CRISPRCasFinder	7653170-7653195	26	NZ_MG973074	Clostridioides difficile strain HSJD-312 plasmid pHSJD-312, complete sequence	7300-7325	5	0.808
NZ_CP051204_10	10.1\|7653170\|26\|NZ_CP051204\|CRISPRCasFinder	7653170-7653195	26	NZ_CP024314	Rhizobium sp. NXC24 plasmid pRspNXC24c, complete sequence	1316657-1316682	5	0.808
NZ_CP051204_10	10.1\|7653170\|26\|NZ_CP051204\|CRISPRCasFinder	7653170-7653195	26	NC_024355	Staphylococcus phage 6ec, complete genome	89669-89694	5	0.808
NZ_CP051204_10	10.1\|7653170\|26\|NZ_CP051204\|CRISPRCasFinder	7653170-7653195	26	NZ_KX149096	Staphylococcus aureus strain WG260 plasmid pWBG4, complete sequence	38342-38367	6	0.769
NZ_CP051204_10	10.1\|7653170\|26\|NZ_CP051204\|CRISPRCasFinder	7653170-7653195	26	NZ_CP013615	Clostridium perfringens strain JP838 plasmid pJFP838A, complete sequence	47879-47904	6	0.769
NZ_CP051204_10	10.1\|7653170\|26\|NZ_CP051204\|CRISPRCasFinder	7653170-7653195	26	AP013648	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C99-MedDCM-OCT-S33-C45, * SEQUENCING IN PROGRESS *	29179-29204	6	0.769
NZ_CP051204_3	3.1\|2014416\|30\|NZ_CP051204\|CRISPRCasFinder	2014416-2014445	30	NZ_CP054032	Rhizobium sp. JKLM13E plasmid pPR13E01, complete sequence	893084-893113	7	0.767
NZ_CP051204_1	1.1\|559821\|30\|NZ_CP051204\|CRISPRCasFinder	559821-559850	30	NZ_CP019367	Borrelia turicatae 91E135 isolate Oz1 plasmid lpG29, complete sequence	8517-8546	8	0.733
NZ_CP051204_1	1.1\|559821\|30\|NZ_CP051204\|CRISPRCasFinder	559821-559850	30	NZ_CP015334	Borrelia hermsii HS1 isolate Browne Mountain plasmid lpG27, complete sequence	9131-9160	8	0.733
NZ_CP051204_1	1.1\|559821\|30\|NZ_CP051204\|CRISPRCasFinder	559821-559850	30	KC139511	Salmonella phage FSL SP-101, partial genome	13208-13237	8	0.733
NZ_CP051204_1	1.1\|559821\|30\|NZ_CP051204\|CRISPRCasFinder	559821-559850	30	MN336265	Salmonella phage vB_SenS-EnJE6, complete genome	24133-24162	8	0.733
NZ_CP051204_1	1.1\|559821\|30\|NZ_CP051204\|CRISPRCasFinder	559821-559850	30	MN927225	Escherichia phage vB_EcoS_XY1, complete genome	9756-9785	8	0.733
NZ_CP051204_1	1.1\|559821\|30\|NZ_CP051204\|CRISPRCasFinder	559821-559850	30	KY626163	Salmonella phage SE40, complete genome	10782-10811	8	0.733
NZ_CP051204_3	3.1\|2014416\|30\|NZ_CP051204\|CRISPRCasFinder	2014416-2014445	30	MF996376	Escherichia phage SRT8, complete genome	41857-41886	9	0.7

1. spacer 10.1|7653170|26|NZ_CP051204|CRISPRCasFinder matches to NZ_KT754167 (Shigella dysenteriae 1 strain 69-3818 plasmid p69-3818, complete sequence) position: , mismatch: 4, identity: 0.846

agaaattttgatattttgttattttg	CRISPR spacer
tgttattttgttattttgttattttg	Protospacer
 *  ****** ***************

2. spacer 10.1|7653170|26|NZ_CP051204|CRISPRCasFinder matches to NZ_CP026770 (Shigella flexneri Y strain 93-3063 plasmid unnamed2) position: , mismatch: 4, identity: 0.846

agaaattttgatattttgttattttg	CRISPR spacer
tgttattttgttattttgttattttg	Protospacer
 *  ****** ***************

3. spacer 10.1|7653170|26|NZ_CP051204|CRISPRCasFinder matches to NZ_CP026770 (Shigella flexneri Y strain 93-3063 plasmid unnamed2) position: , mismatch: 4, identity: 0.846

agaaattttgatattttgttattttg	CRISPR spacer
tgttattttgttattttgttattttg	Protospacer
 *  ****** ***************

4. spacer 10.1|7653170|26|NZ_CP051204|CRISPRCasFinder matches to NZ_CP028875 (Borreliella bavariensis PBi plasmid lp28-4_cp32-1, complete sequence) position: , mismatch: 4, identity: 0.846

agaaattttgatattttgttattttg	CRISPR spacer
taaaatttttataatttgttattttg	Protospacer
 .******* *** ************

5. spacer 10.1|7653170|26|NZ_CP051204|CRISPRCasFinder matches to NZ_CP014494 (Escherichia coli strain MVAST0167 plasmid pMVAST0167_2, complete sequence) position: , mismatch: 4, identity: 0.846

agaaattttgatattttgttattttg	CRISPR spacer
tgttattttgttattttgttattttg	Protospacer
 *  ****** ***************

6. spacer 10.1|7653170|26|NZ_CP051204|CRISPRCasFinder matches to NC_032099 (Shigella dysenteriae 1 strain 92-9000 plasmid p92-9000, complete sequence) position: , mismatch: 4, identity: 0.846

agaaattttgatattttgttattttg	CRISPR spacer
tgttattttgttattttgttattttg	Protospacer
 *  ****** ***************

7. spacer 10.1|7653170|26|NZ_CP051204|CRISPRCasFinder matches to NZ_CP053953 (Bacillus cereus strain FDAARGOS_798 plasmid unnamed2, complete sequence) position: , mismatch: 4, identity: 0.846

agaaattttgatattttgttattttg	CRISPR spacer
taaaattttgatattttaatattttg	Protospacer
 .***************. *******

8. spacer 10.1|7653170|26|NZ_CP051204|CRISPRCasFinder matches to NZ_CP026778 (Shigella dysenteriae strain 69-3818 plasmid unnamed1) position: , mismatch: 4, identity: 0.846

agaaattttgatattttgttattttg	CRISPR spacer
tgttattttgttattttgttattttg	Protospacer
 *  ****** ***************

9. spacer 10.1|7653170|26|NZ_CP051204|CRISPRCasFinder matches to NZ_CP053950 (Bacillus cereus strain FDAARGOS_799 plasmid unnamed2, complete sequence) position: , mismatch: 4, identity: 0.846

agaaattttgatattttgttattttg	CRISPR spacer
taaaattttgatattttaatattttg	Protospacer
 .***************. *******

10. spacer 10.1|7653170|26|NZ_CP051204|CRISPRCasFinder matches to NZ_CP029156 (Clostridioides difficile strain CD161 plasmid unnamed2, complete sequence) position: , mismatch: 4, identity: 0.846

agaaattttgatattttgttattttg	CRISPR spacer
ataaattttgataattttttattttt	Protospacer
* *********** *** *******

11. spacer 10.1|7653170|26|NZ_CP051204|CRISPRCasFinder matches to NZ_CP029153 (Clostridioides difficile strain CDT4 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.846

agaaattttgatattttgttattttg	CRISPR spacer
ataaattttgataattttttattttt	Protospacer
* *********** *** *******

12. spacer 10.1|7653170|26|NZ_CP051204|CRISPRCasFinder matches to NZ_CP020425 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.846

agaaattttgatattttgttattttg	CRISPR spacer
ataaattttgataattttttattttt	Protospacer
* *********** *** *******

13. spacer 10.1|7653170|26|NZ_CP051204|CRISPRCasFinder matches to NZ_CP011969 (Clostridioides difficile ATCC 9689 = DSM 1296 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.846

agaaattttgatattttgttattttg	CRISPR spacer
ataaattttgataattttttattttt	Protospacer
* *********** *** *******

14. spacer 10.1|7653170|26|NZ_CP051204|CRISPRCasFinder matches to NZ_CP026770 (Shigella flexneri Y strain 93-3063 plasmid unnamed2) position: , mismatch: 5, identity: 0.808

agaaattttgatattttgttattttg	CRISPR spacer
cataatattgttattttgttattttg	Protospacer
 . *** *** ***************

15. spacer 10.1|7653170|26|NZ_CP051204|CRISPRCasFinder matches to CP053591 (Aquimarina sp. TRL1 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.808

agaaattttgatattttgttattttg	CRISPR spacer
ccaaattttgatatttttttaatttt	Protospacer
  *************** *** ***

16. spacer 10.1|7653170|26|NZ_CP051204|CRISPRCasFinder matches to NC_018689 (Bacillus thuringiensis MC28 plasmid pMC429, complete sequence) position: , mismatch: 5, identity: 0.808

agaaattttgatattttgttattttg	CRISPR spacer
tgcttttttgatattttgttcttttg	Protospacer
 *   *************** *****

17. spacer 10.1|7653170|26|NZ_CP051204|CRISPRCasFinder matches to NZ_MG973074 (Clostridioides difficile strain HSJD-312 plasmid pHSJD-312, complete sequence) position: , mismatch: 5, identity: 0.808

agaaattttgatattttgttattttg	CRISPR spacer
atccattttgatattttgatattttc	Protospacer
*   ************** ******

18. spacer 10.1|7653170|26|NZ_CP051204|CRISPRCasFinder matches to NZ_CP024314 (Rhizobium sp. NXC24 plasmid pRspNXC24c, complete sequence) position: , mismatch: 5, identity: 0.808

agaaattttgatattttgttattttg	CRISPR spacer
taaaatttcgatattttgtaattttt	Protospacer
 .******.********** *****

19. spacer 10.1|7653170|26|NZ_CP051204|CRISPRCasFinder matches to NC_024355 (Staphylococcus phage 6ec, complete genome) position: , mismatch: 5, identity: 0.808

agaaattttgatattttgttattttg	CRISPR spacer
taaaattttcatattttgttatattt	Protospacer
 .******* ************ **

20. spacer 10.1|7653170|26|NZ_CP051204|CRISPRCasFinder matches to NZ_KX149096 (Staphylococcus aureus strain WG260 plasmid pWBG4, complete sequence) position: , mismatch: 6, identity: 0.769

agaaattttgatattttgttattttg	CRISPR spacer
tctaattttaatattttgttatttga	Protospacer
   ******.************** .

21. spacer 10.1|7653170|26|NZ_CP051204|CRISPRCasFinder matches to NZ_CP013615 (Clostridium perfringens strain JP838 plasmid pJFP838A, complete sequence) position: , mismatch: 6, identity: 0.769

agaaattttgatattttgttattttg	CRISPR spacer
taaaatttttatattttgttattaca	Protospacer
 .******* ************* ..

22. spacer 10.1|7653170|26|NZ_CP051204|CRISPRCasFinder matches to AP013648 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C99-MedDCM-OCT-S33-C45, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 6, identity: 0.769

agaaattttgatattttgttattttg	CRISPR spacer
tatctttttgatattttgtttttttg	Protospacer
 .   *************** *****

23. spacer 3.1|2014416|30|NZ_CP051204|CRISPRCasFinder matches to NZ_CP054032 (Rhizobium sp. JKLM13E plasmid pPR13E01, complete sequence) position: , mismatch: 7, identity: 0.767

tgttacaatcccggattccgttggatggat	CRISPR spacer
tgttacagtcccggatttcgttgaggcgtt	Protospacer
*******.*********.*****..  * *

24. spacer 1.1|559821|30|NZ_CP051204|CRISPRCasFinder matches to NZ_CP019367 (Borrelia turicatae 91E135 isolate Oz1 plasmid lpG29, complete sequence) position: , mismatch: 8, identity: 0.733

gaaaatccgtaaatcttttttgatctcgtg	CRISPR spacer
tcaaatccggaaatcttttttgataaaatc	Protospacer
  ******* **************   .*

25. spacer 1.1|559821|30|NZ_CP051204|CRISPRCasFinder matches to NZ_CP015334 (Borrelia hermsii HS1 isolate Browne Mountain plasmid lpG27, complete sequence) position: , mismatch: 8, identity: 0.733

gaaaatccgtaaatcttttttgatctcgtg	CRISPR spacer
tcaaatccggaaatcttttttgataaaatc	Protospacer
  ******* **************   .*

26. spacer 1.1|559821|30|NZ_CP051204|CRISPRCasFinder matches to KC139511 (Salmonella phage FSL SP-101, partial genome) position: , mismatch: 8, identity: 0.733

gaaaatccgtaaatcttttttgatctcgtg	CRISPR spacer
atacttaggtaaatcttttttcatctcgtc	Protospacer
. *  *  ************* *******

27. spacer 1.1|559821|30|NZ_CP051204|CRISPRCasFinder matches to MN336265 (Salmonella phage vB_SenS-EnJE6, complete genome) position: , mismatch: 8, identity: 0.733

gaaaatccgtaaatcttttttgatctcgtg	CRISPR spacer
atacttaggtaaatcttttttcatctcgtc	Protospacer
. *  *  ************* *******

28. spacer 1.1|559821|30|NZ_CP051204|CRISPRCasFinder matches to MN927225 (Escherichia phage vB_EcoS_XY1, complete genome) position: , mismatch: 8, identity: 0.733

gaaaatccgtaaatcttttttgatctcgtg	CRISPR spacer
atacttgggtaaatcttttttcatctcgtc	Protospacer
. *  *  ************* *******

29. spacer 1.1|559821|30|NZ_CP051204|CRISPRCasFinder matches to KY626163 (Salmonella phage SE40, complete genome) position: , mismatch: 8, identity: 0.733

gaaaatccgtaaatcttttttgatctcgtg	CRISPR spacer
atacttaggtaaatcttttttcatctcgtc	Protospacer
. *  *  ************* *******

30. spacer 3.1|2014416|30|NZ_CP051204|CRISPRCasFinder matches to MF996376 (Escherichia phage SRT8, complete genome) position: , mismatch: 9, identity: 0.7

tgttacaatcccggattccgttggatggat	CRISPR spacer
tgttacaatcccggattgcgtaccgtttgc	Protospacer
***************** ***   .*  ..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

3347999 : 3482871

Tupanvirus(42.86%)

transposase,integrase,protease

attL 3481335:3481350|attR 3491903:3491918

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_168860808.1\|3347999_3348638_+\|transposase	transposase	NA	NA	NA	NA
WP_168804511.1\|3348624_3349518_-	radical SAM protein	NA	NA	NA	NA
WP_168804512.1\|3349514_3350225_-	DNA alkylation repair protein	NA	NA	NA	NA
WP_168860809.1\|3350339_3352763_-	FtsX-like permease family protein	NA	NA	NA	NA
WP_168860810.1\|3352896_3354528_-	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_168860811.1\|3354634_3355597_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_168860812.1\|3355836_3357216_-	transcriptional regulator	NA	NA	NA	NA
WP_168860813.1\|3357333_3357768_+	DoxX family protein	NA	NA	NA	NA
WP_168860814.1\|3357876_3358215_+	transcription initiation protein	NA	NA	NA	NA
WP_168804519.1\|3358267_3359488_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_168860815.1\|3359578_3360247_+	dihydrofolate reductase	NA	NA	NA	NA
WP_168804521.1\|3360241_3361177_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_168860816.1\|3361202_3362282_-	aldo/keto reductase	NA	NA	NA	NA
WP_168860817.1\|3362399_3362867_-	DUF1572 domain-containing protein	NA	NA	NA	NA
WP_168862391.1\|3362956_3364045_+	acyltransferase	NA	NA	NA	NA
WP_168860818.1\|3364467_3367092_+	ROK family protein	NA	NA	NA	NA
WP_168860819.1\|3367109_3368507_+	sugar porter family MFS transporter	NA	NA	NA	NA
WP_168862392.1\|3368519_3371831_+	glycoside hydrolase	NA	NA	NA	NA
WP_168804526.1\|3371885_3372629_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_168804527.1\|3372716_3373898_-	hypothetical protein	NA	NA	NA	NA
WP_168804528.1\|3374224_3374908_-	hypothetical protein	NA	NA	NA	NA
WP_168860820.1\|3375087_3375501_+	VOC family protein	NA	NA	NA	NA
WP_168804530.1\|3375493_3377665_-	PQQ-binding-like beta-propeller repeat protein	NA	NA	NA	NA
WP_168860821.1\|3377874_3378765_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_168860822.1\|3378998_3379901_+	sugar phosphate isomerase/epimerase	NA	NA	NA	NA
WP_168860823.1\|3380006_3381764_+	peptide MFS transporter	A0A0P0IY73	Acinetobacter_phage	2.8e-48	29.4
WP_168862393.1\|3381820_3383116_-	hypothetical protein	NA	NA	NA	NA
WP_168860824.1\|3383176_3384379_-	hypothetical protein	NA	NA	NA	NA
WP_168860825.1\|3384404_3385574_-	DUF4959 domain-containing protein	NA	NA	NA	NA
WP_168860826.1\|3385611_3387528_-	RagB/SusD family nutrient uptake outer membrane protein	NA	NA	NA	NA
WP_168860827.1\|3387548_3390695_-	TonB-dependent receptor	NA	NA	NA	NA
WP_168804538.1\|3390955_3391690_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_168860828.1\|3391767_3393678_-	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA
WP_168860829.1\|3393762_3394944_-	DUF1343 domain-containing protein	NA	NA	NA	NA
WP_168804541.1\|3395060_3396134_-	hypothetical protein	NA	NA	NA	NA
WP_168860830.1\|3396165_3397362_-	DUF4959 domain-containing protein	NA	NA	NA	NA
WP_168860831.1\|3397413_3399306_-	RagB/SusD family nutrient uptake outer membrane protein	NA	NA	NA	NA
WP_168860832.1\|3399329_3402779_-	TonB-dependent receptor	NA	NA	NA	NA
WP_168860833.1\|3402945_3404055_-	DUF4974 domain-containing protein	NA	NA	NA	NA
WP_168804546.1\|3404134_3404740_-	RNA polymerase sigma-70 factor	NA	NA	NA	NA
WP_168804547.1\|3405081_3405906_-\|protease	protease	NA	NA	NA	NA
WP_168804548.1\|3406450_3407497_-	hypothetical protein	NA	NA	NA	NA
WP_168860834.1\|3407714_3409880_-	DUF5110 domain-containing protein	NA	NA	NA	NA
WP_168860835.1\|3409884_3411567_-	RagB/SusD family nutrient uptake outer membrane protein	NA	NA	NA	NA
WP_168860836.1\|3411585_3414996_-	TonB-dependent receptor	NA	NA	NA	NA
WP_168804552.1\|3415147_3416098_-	DUF4974 domain-containing protein	NA	NA	NA	NA
WP_168804553.1\|3416175_3416724_-	RNA polymerase sigma-70 factor	NA	NA	NA	NA
WP_168804554.1\|3416921_3417254_+	YegP family protein	NA	NA	NA	NA
WP_168860837.1\|3417372_3435822_-	non-ribosomal peptide synthase/polyketide synthase	A0A2K9KZV5	Tupanvirus	2.7e-77	32.2
WP_168860838.1\|3436566_3438636_-	acylase	NA	NA	NA	NA
WP_168860839.1\|3438641_3445943_-	amino acid adenylation domain-containing protein	A0A2K9KZV5	Tupanvirus	7.1e-61	30.6
WP_168860840.1\|3445960_3472063_-	non-ribosomal peptide synthase/polyketide synthase	A0A2K9KZV5	Tupanvirus	8.4e-189	28.6
WP_168802981.1\|3473404_3474506_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	1.5e-44	42.1
WP_168860841.1\|3476437_3477091_+	hypothetical protein	NA	NA	NA	NA
WP_168860842.1\|3477101_3477494_+	hypothetical protein	NA	NA	NA	NA
WP_168860843.1\|3477558_3478332_+	hypothetical protein	NA	NA	NA	NA
WP_168860844.1\|3478445_3479657_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	5.6e-56	53.5
WP_168860845.1\|3479771_3481109_-\|integrase	site-specific integrase	H7BUI8	unidentified_phage	1.6e-27	38.9
3481335:3481350	attL	NA	NA	NA	NA
WP_168860846.1\|3481509_3482871_+\|integrase	site-specific integrase	NA	NA	NA	NA
WP_168860846.1\|3481509_3482871_+\|integrase	site-specific integrase	NA	NA	NA	NA
3491903:3491918	attR	NA	NA	NA	NA

DBSCAN-SWA_2

4783230 : 4821780

Gordonia_phage(50.0%)

head,holin,tail,capsid,integrase

attL 4781914:4781929|attR 4805549:4805564

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4781914:4781929	attL	NA	NA	NA	NA
WP_168861306.1\|4783230_4785762_-\|holin	phospholipase C, phosphocholine-specific	NA	NA	NA	NA
WP_143312752.1\|4785937_4786348_-	hypothetical protein	NA	NA	NA	NA
WP_168806184.1\|4786459_4787326_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_168861307.1\|4787387_4788269_+	hypothetical protein	NA	NA	NA	NA
WP_168806188.1\|4788389_4789526_-	hypothetical protein	NA	NA	NA	NA
WP_168806190.1\|4789599_4791405_-	hypothetical protein	NA	NA	NA	NA
WP_168861308.1\|4791420_4792401_-	DUF4974 domain-containing protein	NA	NA	NA	NA
WP_078667378.1\|4792411_4792987_-	RNA polymerase sigma-70 factor	NA	NA	NA	NA
WP_168806194.1\|4793400_4793898_+	OmpH family outer membrane protein	NA	NA	NA	NA
WP_168806196.1\|4794075_4794369_-	N-acetyltransferase	NA	NA	NA	NA
WP_168861309.1\|4794554_4795427_-	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA
WP_168806218.1\|4795559_4796531_+	DUF2157 domain-containing protein	NA	NA	NA	NA
WP_168861310.1\|4796527_4797688_+	hypothetical protein	NA	NA	NA	NA
WP_168862428.1\|4798310_4799528_-	PepSY domain-containing protein	NA	NA	NA	NA
WP_168806222.1\|4800123_4801143_-	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_168806224.1\|4801261_4802404_+	HAMP domain-containing histidine kinase	NA	NA	NA	NA
WP_168861311.1\|4802683_4803880_+\|integrase	site-specific integrase	NA	NA	NA	NA
WP_168861312.1\|4803905_4804637_-	hypothetical protein	NA	NA	NA	NA
WP_168861313.1\|4804765_4804990_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_168861314.1\|4805284_4805713_+	response regulator	NA	NA	NA	NA
4805549:4805564	attR	NA	NA	NA	NA
WP_168861315.1\|4806235_4806502_-	hypothetical protein	NA	NA	NA	NA
WP_168861316.1\|4806642_4807173_-	peptidoglycan hydrolase	NA	NA	NA	NA
WP_168861317.1\|4807153_4807615_-	hypothetical protein	NA	NA	NA	NA
WP_168861318.1\|4807718_4808174_-\|holin	phage holin family protein	NA	NA	NA	NA
WP_168861319.1\|4808214_4811313_-	hypothetical protein	A0A166Y926	Gordonia_phage	1.2e-14	28.8
WP_168861320.1\|4811322_4812702_-	hypothetical protein	NA	NA	NA	NA
WP_168861321.1\|4812703_4813450_-	hypothetical protein	NA	NA	NA	NA
WP_168861322.1\|4813456_4815361_-	hypothetical protein	NA	NA	NA	NA
WP_168861323.1\|4815393_4817472_-	hypothetical protein	NA	NA	NA	NA
WP_168861324.1\|4817474_4817732_-	hypothetical protein	NA	NA	NA	NA
WP_168861325.1\|4817796_4818180_-	hypothetical protein	NA	NA	NA	NA
WP_168861326.1\|4818185_4818635_-	hypothetical protein	NA	NA	NA	NA
WP_168861327.1\|4818635_4819085_-	hypothetical protein	NA	NA	NA	NA
WP_168861328.1\|4819081_4819654_-	hypothetical protein	NA	NA	NA	NA
WP_168861329.1\|4819646_4819979_-\|head	phage head closure protein	NA	NA	NA	NA
WP_168861330.1\|4819975_4820509_-\|head,tail	phage gp6-like head-tail connector protein	NA	NA	NA	NA
WP_168861331.1\|4820550_4821780_-\|capsid	phage major capsid protein	A0A1U9GXN6	Vibrio_phage	1.8e-17	28.3

DBSCAN-SWA_3

5500420 : 5508575

Escherichia_phage(42.86%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_168861524.1\|5500420_5501560_+	DegT/DnrJ/EryC1/StrS family aminotransferase	A0A0P0YLZ6	Yellowstone_lake_phycodnavirus	1.0e-14	25.1
WP_168861525.1\|5501556_5502867_+	UDP-glucose/GDP-mannose dehydrogenase family protein	A0A127AXI2	Bacillus_phage	7.2e-81	39.4
WP_168807202.1\|5502891_5503836_+	SDR family oxidoreductase	A0A2K9KZK0	Tupanvirus	2.2e-71	44.6
WP_168861526.1\|5503858_5504914_+	dTDP-glucose 4,6-dehydratase	A0A1D7XFE8	Escherichia_phage	2.0e-81	49.1
WP_168807206.1\|5504922_5505477_+	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	4.6e-37	44.1
WP_168861527.1\|5505492_5506359_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	1.9e-37	38.1
WP_168807210.1\|5506419_5507115_-	hypothetical protein	NA	NA	NA	NA
WP_168861528.1\|5507294_5508575_+\|tRNA	tyrosine--tRNA ligase	A0A1L2CUL7	Pectobacterium_phage	9.8e-75	39.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP051204

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection