CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP050151	Hafnia alvei strain A23BA plasmid pA23BA, complete sequence	0 crisprs	NA	0	0	1	0
NZ_CP050150	Hafnia alvei strain A23BA chromosome, complete genome	5 crisprs	WYL,DEDDh,cas3,DinG,csa3,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	2	7	8	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

66869 : 74533

Yersinia_phage(33.33%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_166493906.1\|66869_67295_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	1.9e-30	53.2
WP_166493907.1\|67296_68556_+	translesion error-prone DNA polymerase V subunit UmuC	F1C5A5	Cronobacter_phage	1.2e-141	56.8
WP_166493908.1\|68563_68899_-	hypothetical protein	NA	NA	NA	NA
WP_166493930.1\|69844_70810_-	ParB/RepB/Spo0J family plasmid partition protein	Q7Y3Y7	Yersinia_phage	1.4e-89	57.5
WP_166493909.1\|70806_71973_-	plasmid-partitioning protein SopA	Q7Y3Y6	Yersinia_phage	3.9e-195	85.0
WP_072308040.1\|72525_73227_+	replication initiation protein	I3WF20	Macacine_betaherpesvirus	1.5e-24	30.9
WP_166493910.1\|73579_74533_+\|transposase	Rpn family recombination-promoting nuclease/putative transposase	Q2A0A7	Sodalis_phage	2.5e-75	58.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP050150

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP050150_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050150_1

1120270-1120361

Orphan

Consensus_repeat	Method
CTGCTCCTCCCCTGCGAAGGGGGAGGCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP050150_1

>merge|NZ_CP050150|1|1120270-1120361|CRISPRCasFinder
CTGCTCCTCCCCTGCGAAGGGGGAGGCTGGGAGGGGGTCAGCTATGTTGAACAGAATCTCGAGCTGCTCCTCCCCCTGCGAAGGGGGAGGCT

>NZ_CP050150|1|1|1120270-1120361|CRISPRCasFinder
CTGCTCCTCCCCTGCGAAGGGGGAGGCT	GGGAGGGGGTCAGCTATGTTGAACAGAATCTCGAGC
TGCTCCTCCCCCTGCGAAGGGGGAGGCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050150.1\|WP_046449534.1\|1119477_1120200_+\|amino-acid-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224051
NZ_CP050150.1\|WP_043491538.1\|1129975_1130662_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|182569
NZ_CP050150.1\|WP_130994415.1\|1110593_1112243_-\|amidohydrolase	unknown	unknown	gnl\|CDD\|238625
NZ_CP050150.1\|WP_040044484.1\|1117863_1118631_+\|basic-amino-acid-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270342
NZ_CP050150.1\|WP_046449530.1\|1126361_1127288_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050150.1\|WP_025800559.1\|1115861_1117166_+\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_CP050150.1\|WP_166492891.1\|1107142_1108738_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340879
NZ_CP050150.1\|WP_025800560.1\|1117280_1117508_-\|DUF465-domain-containing-protein	unknown	unknown	gnl\|CDD\|183127
NZ_CP050150.1\|WP_046449531.1\|1125951_1126296_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050150.1\|WP_096386600.1\|1129366_1130008_-\|multifunctional-acyl-CoA-thioesterase-I/protease-I/lysophospholipase-L1	unknown	unknown	gnl\|CDD\|182521
NZ_CP050150.1\|WP_040044486.1\|1120384_1121818_-\|amino-acid-permease	unknown	unknown	gnl\|CDD\|182566
NZ_CP050150.1\|WP_025800558.1\|1114140_1115778_+\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_CP050150.1\|WP_043491528.1\|1125485_1125941_-\|DUF5071-domain-containing-protein	unknown	unknown	gnl\|CDD\|213039
NZ_CP050150.1\|WP_046449532.1\|1123454_1125143_-\|urocanate-hydratase	unknown	unknown	gnl\|CDD\|235448
NZ_CP050150.1\|WP_025800567.1\|1127609_1128464_-\|co-chaperone-YbbN	unknown	unknown	gnl\|CDD\|225660
NZ_CP050150.1\|WP_166493787.1\|1112404_1113859_+\|PLP-dependent-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|224089
NZ_CP050150.1\|WP_166492892.1\|1108823_1110494_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340879
NZ_CP050150.1\|WP_043491525.1\|1121919_1123455_-\|histidine-ammonia-lyase	unknown	unknown	gnl\|CDD\|236484
NZ_CP050150.1\|WP_025800562.1\|1118726_1119491_+\|amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223836
NZ_CP050150.1\|WP_025800568.1\|1128538_1129312_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|181198

Protein	Function_ID	Function_description	E-value
NZ_CP050150.1\|WP_046449534.1\|1119477_1120200_+\|amino-acid-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224051	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].	4.28451e-154
NZ_CP050150.1\|WP_043491538.1\|1129975_1130662_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|182569	PRK10584, PRK10584, putative ABC transporter ATP-binding protein YbbA; Provisional.	3.22081e-149
NZ_CP050150.1\|WP_130994415.1\|1110593_1112243_-\|amidohydrolase	gnl\|CDD\|238625	cd01300, YtcJ_like, YtcJ_like metal dependent amidohydrolases. YtcJ is a Bacillus subtilis ORF of unknown function. The Arabidopsis homolog LAF3 has been identified as a factor required for photochrome A signalling.	6.64604e-136
NZ_CP050150.1\|WP_040044484.1\|1117863_1118631_+\|basic-amino-acid-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270342	cd13624, PBP2_Arg_Lys_His, Substrate binding domain of the arginine-, lysine-, histidine-binding protein ArtJ; the type 2 periplasmic binding protein fold. This group includes the periplasmic substrate-binding protein ArtJ of the ATP-binding cassette (ABC) transport system from the thermophilic bacterium Geobacillus stearothermophilus, which is specific for arginine, lysine, and histidine. ArtJ belongs to the type 2 periplasmic-binding fold protein (PBP2) superfamily, whose members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space as a primary receptor. PBP2 typically comprises of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two receptor cytoplasmically-located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	3.44748e-96
NZ_CP050150.1\|WP_025800559.1\|1115861_1117166_+\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_CP050150.1\|WP_166492891.1\|1107142_1108738_-\|MFS-transporter	gnl\|CDD\|340879	cd17321, MFS_MMR_MDR_like, Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This family is composed of bacterial, fungal, and archaeal multidrug resistance (MDR) transporters including several proteins from Bacilli such as methylenomycin A resistance protein (also called MMR peptide), tetracycline resistance protein (TetB), and lincomycin resistance protein LmrB, as well as fungal proteins such as vacuolar basic amino acid transporters, which are involved in the transport into vacuoles of the basic amino acids histidine, lysine, and arginine in Saccharomyces cerevisiae, and aminotriazole/azole resistance proteins. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, MMR confers resistance to the epoxide antibiotic methylenomycin while TetB resistance to tetracycline by an active tetracycline efflux. MMR-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.12892e-30
NZ_CP050150.1\|WP_025800560.1\|1117280_1117508_-\|DUF465-domain-containing-protein	gnl\|CDD\|183127	PRK11415, PRK11415, hypothetical protein; Provisional.	7.80615e-22
NZ_CP050150.1\|WP_025800568.1\|1128538_1129312_-\|SDR-family-oxidoreductase	gnl\|CDD\|181198	PRK08017, PRK08017, SDR family oxidoreductase.	0
NZ_CP050150.1\|WP_096386600.1\|1129366_1130008_-\|multifunctional-acyl-CoA-thioesterase-I/protease-I/lysophospholipase-L1	gnl\|CDD\|182521	PRK10528, PRK10528, multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional.	1.0317e-115
NZ_CP050150.1\|WP_040044486.1\|1120384_1121818_-\|amino-acid-permease	gnl\|CDD\|182566	PRK10580, proY, putative proline-specific permease; Provisional.	0
NZ_CP050150.1\|WP_025800558.1\|1114140_1115778_+\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP050150.1\|WP_043491528.1\|1125485_1125941_-\|DUF5071-domain-containing-protein	gnl\|CDD\|213039	cd11743, Cthe_2751_like, Uncharacterized protein domain similar to Clostridium thermocellum 2751. Cthe_2751 has been found to form homodimers. Based on structural similarity to other families, a role in processing nucleic acids was suggested, though interactions with DNA could not be demonstrated.	7.23095e-37
NZ_CP050150.1\|WP_046449532.1\|1123454_1125143_-\|urocanate-hydratase	gnl\|CDD\|235448	PRK05414, PRK05414, urocanate hydratase; Provisional.	0
NZ_CP050150.1\|WP_025800567.1\|1127609_1128464_-\|co-chaperone-YbbN	gnl\|CDD\|225660	COG3118, COG3118, Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones].	1.06563e-110
NZ_CP050150.1\|WP_166493787.1\|1112404_1113859_+\|PLP-dependent-aminotransferase-family-protein	gnl\|CDD\|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	2.59785e-136
NZ_CP050150.1\|WP_166492892.1\|1108823_1110494_-\|MFS-transporter	gnl\|CDD\|340879	cd17321, MFS_MMR_MDR_like, Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This family is composed of bacterial, fungal, and archaeal multidrug resistance (MDR) transporters including several proteins from Bacilli such as methylenomycin A resistance protein (also called MMR peptide), tetracycline resistance protein (TetB), and lincomycin resistance protein LmrB, as well as fungal proteins such as vacuolar basic amino acid transporters, which are involved in the transport into vacuoles of the basic amino acids histidine, lysine, and arginine in Saccharomyces cerevisiae, and aminotriazole/azole resistance proteins. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, MMR confers resistance to the epoxide antibiotic methylenomycin while TetB resistance to tetracycline by an active tetracycline efflux. MMR-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.72811e-26
NZ_CP050150.1\|WP_043491525.1\|1121919_1123455_-\|histidine-ammonia-lyase	gnl\|CDD\|236484	PRK09367, PRK09367, histidine ammonia-lyase; Provisional.	0
NZ_CP050150.1\|WP_025800562.1\|1118726_1119491_+\|amino-acid-ABC-transporter-permease	gnl\|CDD\|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	4.50268e-77

>NZ_CP050150.1|WP_046449534.1|1119477_1120200_+|amino-acid-ABC-transporter-ATP-binding-protein
MIHVDNLQKQFGETHVLRGISCDIKPQEVVCIIGPSGSGKSTFLRCLNALEKPDGGEVSVNGFDVHNPKTNLNKMRESVGMVFQRFNLFPHMTVLDNLIMAPMSVKGMSRADALKRAEVLLDKVGLLDKIDAWPASLSGGQQQRVAIARSMAMDPSIILFDEPTSALDPELVGEVLEVMKKLALEGMTMVIVTHEMGFAREVADRVVFIDQGIIQEEGTPEQIFTAPKNPRTAAFLSKVL
>NZ_CP050150.1|WP_025800562.1|1118726_1119491_+|amino-acid-ABC-transporter-permease
MTGFRWEIIQEYAPLFAEGAWMTIKCTIICVILGTLWGLTLGLGRMAKAENGPWRFVLRYFVQWPVRVYVSAFRGTPLFVQIMVVHFALVPLLINPRDGVLVTSGLMSVDFARMLRSDYGAFLSCIVAITLNAGAYVSEIFRAGIQSIDHGQMEASRALGMSWGKTMRKVILPQAFRRILPPLGNNAIAIVKDSSLASAIGLADLAYAARTVSGAYATYWEPYLTISVIYWMLTFILSLLVQHMEKRLSKSDSR
>NZ_CP050150.1|WP_040044484.1|1117863_1118631_+|basic-amino-acid-ABC-transporter-substrate-binding-protein
MLKKMVLAGCFMAAMMGSSFAAQQTYVVGSGGTYRPFEFENSQKQLEGFDIDIIKAVAKAEGFDIKLVNTPWEGIFATLNSGDRDIIISGITITDKRQQMVDFSAPYFPAEQSIVVPNGSKVDSVNALKGQKVGVVNSSTGDIVVSEVLGKNSTDIKRFDNTPLMLQELYEDGLGAAVGDVGVVKYYIKNHPEKEFKLVPDSKFERQYFGIAVAKGNQELLGKINAGLKKIVADGTYAKIYTQWFDANVPTLPEK
>NZ_CP050150.1|WP_025800560.1|1117280_1117508_-|DUF465-domain-containing-protein
MFPEYRDLISRLKTEDVRFATLFHEHNQLDHTIRRAENRPGAPFDEQIAGLKREKLRLKDELYKILRSYEDEATT
>NZ_CP050150.1|WP_025800559.1|1115861_1117166_+|phosphopyruvate-hydratase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFMGKGVLKAVAAVNGPIAQAVMGKDAKDQANIDKIMIDLDGTENKSKFGANAILAVSLAAAKAAAASKGLPLYAHIAELNGTPGKYSMPLPMMNIINGGEHADNNVDIQEFMIQPVGAKTLKEAVRIGSEVFHNLAKVLKSKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDVTLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLENLTKDYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIVNSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALAAQGTPAPFNGLKEVKGQ
>NZ_CP050150.1|WP_025800558.1|1114140_1115778_+|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVSMMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERILEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQMAVEVGREHTMYMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDVLICRSDRAVPANERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLAEWEQVIYEEANPGGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETKGVELLKGLDAILVPGGFGYRGIEGKIATARYARENNIPYLGICLGMQVALMEFARNVAGMADANSTEFVPDCKYPVVALISEWRDEEGNVEVRTEESDLGGTMRLGGQQCNLADGSLVRQMYGSPTIVERHRHRYEVNNMLLKQIEAAGLRVTGRSADNKLVEIIELPNHPWFVASQFHPEFTSTPRDGHPLFAGFVKAAGEYQKRQAK
>NZ_CP050150.1|WP_166493787.1|1112404_1113859_+|PLP-dependent-aminotransferase-family-protein
MQLQLTGIKLEAGRKRSQQLYLLLRELIASEPLCGGSKLPATRELAKMLGVSRNTVMNAYERLFADGFLETRVGDGTYITLAGSGTRGQAQPSPPLNPPLHAGLRLPIAQQFNRHIVHDGLPSAFRIGLPALDLFPFETWSRLQNRFWRREPIQHMGYGDPAGDIQLRELIAHYLRSARGLACDPAQILVTLGAQQAIMVSAAMLLRAEDEVVMENPCYWAAAGAFSCLGVHINAVGVDDDGLLTHQLAQIPKAKMAYVCPSCQYPTGVTMSLPRRLELLNWAIEREAWILEDDYDGEYRYSGTPLMPLAALDQSNRVIYIGSFSKVMYPGLRLGYMVAPPQLVSQLTLLRTMASRQPPINDQRVMADFIAEGHFQPHIRRMRRAGQLRRDALLKSWCQHLSHIGSMPEVASGLHVTIRLPNFEREQTLVAQAMSEGIEITPLSSLWLPESEENANHYGLILGFAGVSESAIERAVLKLKDIWR
>NZ_CP050150.1|WP_130994415.1|1110593_1112243_-|amidohydrolase
MMTNQTVIYAAKKIITMCPSQPEASHVAVRDGKILAVGTLEELEGWGEYTLDNTFANKIVMPGLIEAHSHATGGGMWQFPYVGYYDRPDYTGKIWQGCRSFDEVVTALQAIERTMTDPHAPLIAWGVDPIYFGSEKLGRQHLDKVSTTRPVAVIHMSIHLMGANTCALHDCGIFDDSAIEGVVKNEDGTLHGELVEFAAMGPILDKYGFWDALTTEQAIRNFGQEAFRAGCTSAADMGLTDFSNPELTANYIRMTRENSFPIRLLVAYGPPFVKKPFVEAIEFASDVMKHGHEKMLFGPMKIFLDGSIQGGSGRMLSPGYYKTGHNGAWNATPQVVEQQVYEIMSRGYQVHCHCNGDEASEAFIQAVEKTLNRIPAANHRATMQHAQMLREDQFKRIKSLGMCVNFFSNHIYYWGDQHYAKTMGPERANRMDACGSAVRHGIPFAFHSDCGITPINPLFTGWCAVNRVTASGRVLGEKEKISVAEALHAMTVGAAYTMKVDHLIGSIECGKYADFTILEQDPLAIEPMKLKDIGIWGTVLGGRLQPIQN
>NZ_CP050150.1|WP_166492892.1|1108823_1110494_-|MFS-transporter
MSSIATPAVANAADSSTTIKWLPLLVLCLAQLSTSGDNATLSIATGALVKDLHASMDLINIANAMYSLAAGSLMVAAGMIGLIIGWKKTFRIGCSLLFLAELTAFFSPNMEIFTYGARLLSGVGGSFMIPSVLGLIASNYKGSQQAVAFGAIGAASGVSFAAGPIICGLLVDHMGWRTAFAAIAGLCIVIFAGSFLVPTPAKPERKVKFDALGVLLTVVGLFSVILGFLKVSSWGLFTPFNAPFTVAGLSPAPFLVLFGLVVLAVMLKWERYREAKVGSALIPMSFLATPQVRNGLYLTAFIFLAYGSGIFVTVSFVQVVAGLNGIQTGLMILPFALGVVFFSLGLPVIYKNANPKRLCQAALLIGTLGSILCIFGFQPSDYSTIVPVGMCLIGISMGTISAYSSYIVTSGLPLRDAQQSGGVQATSRNVGQAIGVAVCGMVMLTTVTMAVQGAARSDDHLSIATRTKVSEITVIPYLSDNAFTKLMLDHGITQGDVPALSEVYKTARLNATRAGMVATAIMTLMFLFGTRNLPTRTKGNQPDGQTDDKKKKQAAR
>NZ_CP050150.1|WP_166492891.1|1107142_1108738_-|MFS-transporter
MLKTAPINTRGIWLPLIVLCMAQFLASADNVTLSIATHALMHDLGASMAQVSAANTMYPLIAGTFMIAGGMLGGVLGWRRTFRIGCAIYLLGELCATLAPSISFFIWAARILAGIGGSFMIPSVFGLITGLYQGRDRAMAFGALGAASGVSFALGPIICGMLLDTLGWRWAFSVMGGLLVIILLLSALIDEPAKSNQPLHFDFPAFILSTIGLFLVIFGILQISNWGLFAPFNPPFTLFGLSPALFLVLAGILVLIIMLRWEKTHEARTGSALIPHAFLHTPQVRAGLYLTAYIFFAYSSGIFVVVSFAQVVSGLTAIQTGLLIVPFAICLAGCSLGLPLFIHQRNARRQCRVGLILGIIGAAVTAAGIGVHSFNRSLIIVGLCFIGSSMGVIAANAPYLVTSALPEKEARQSGGIQSAARDIGQALGVALVSTVMLTTLTFSMKHRIADITVTPQTRITIQNMTVFPYLSDQGFSSLLVQSGATKQDLPTITKLYQQSRARVSQAGLLAMALMTLLFLLGTRGILQLDEE
>NZ_CP050150.1|WP_040044486.1|1120384_1121818_-|amino-acid-permease
MQNNNETSPLQPHNTSHLKRGLNARHIRFLALGSAIGTGLFYGSAGAIQLAGPAVLLAYLVGGLAVFMVMRALGEMAVHQPVSGSFGHYASRYLGPLAGFITGWTYTFEMVIVGMADVTAFGIYMGLWFPDVSQWIWVLSIVCFIGALNLCSVKVFGEMEFWLSLIKVVAIIAMIVGGGAIMMFGFGQHEQATGFSNLWQHGGFMPNGITGVIASLAVVMFAFGGIEIIGVTASEARDPAKVIPKAINTVPVRILLFYVLTLMVLMAIYPWNSIGQHGSPFVEIFKSLGISSAAHVLNVVVITAAISAINSDIFGAGRMMYGMAKDGQAPQCFTKLTAGGVPWMTVLVMAIALLTGVVLNYLIPEKVFLIIASIATFATVWVWLMILLSQVAMRRQMSKEEVATLKFPVPFWPLAPALTIIFMAFVIALLGYFEDSRVALAVGVVWMALLTLAWWIWVRKPKGQSVNGFNAETEADV
>NZ_CP050150.1|WP_043491525.1|1121919_1123455_-|histidine-ammonia-lyase
MYELMLQPGKITLSQLREIYHHPVHIQLHSSAREPIRQSVACVERIVAEGRTAYGINTGFGLLASTRIETCDLENLQRSIVLSHAAGVGSANDDAIVRLIMVMKINSLARGFSGIREEVLDALIALVNAEVYPHIPVKGSVGASGDLAPLAHMSLVLLGEGQARYQGEWLPATQALEKAGLKPIQLAAKEGLALLNGTQVSTAYALRGLFDAEDMYASALVCGGLTVEAVLGSRSPFDARIHDVRGQIGQIDSAAAYRHLLGERSEVSDSHHNCGKVQDPYSLRCQPQVMGACLTQIRQAAAVLEIEANAVSDNPLVFAEQNDVVSGGNFHAEPVAMAADNLALALAEIGALSERRTSLMMDKHMSQLPPFLVNNGGVNSGFMIAQVTAAALASENKALAHPSSVDSLPTSANQEDHVSMAPAAGRRLWEMAENVRGILAIEWLSACQGLDFRNGLKTSPRLEQARQLLRESVAYYDKDRFFAPDIEAASQLLGSGQLKALIPSALLPSQA
>NZ_CP050150.1|WP_046449532.1|1123454_1125143_-|urocanate-hydratase
MTLPNRLREIDIRAPRGTQLNAKSWQTEAPLRMLMNNLDPEVAENPHELVVYGGIGRAARNWECYDKIVETLKNLNDDETLLVQSGKPVGVFKTHSNAPRVLIANSNLVPHWATWEHFNELDAKGLAMYGQMTAGSWIYIGSQGIVQGTYETFVEAGRQHYNGDLTGRWVLTAGLGGMGGAQPLAATMAGLTSLNIECQQSRIDFRLKTGYVDEQATDLDDALARIKRYTEAGKAISIALCGNAAEILPELVRRGVRPDMVTDQTSAHDPLNGYLPKGWTWETYRERALAEPAFVVNAAKESMAEHVEAMLAFQKMGIPTFDYGNNIRQMAKEMGVTHAFDFPGFVPAYIRPLFCRGVGPFRWAALSGDPEDIFKTDAMVKELIPDDEHLHHWLDMARERIHFQGLPARICWVGLGQRAKLGLAFNEMVRSGALSAPIVIGRDHLDSGSVASPNRETESMQDGSDAVSDWPLLNALLNTASGATWVSLHHGGGVGMGFSQHSGMVIVCDGTDEAAERIARVLHNDPATGVMRHADAGYEIAIECAHEQGLNLPMITSAQGKK
>NZ_CP050150.1|WP_043491528.1|1125485_1125941_-|DUF5071-domain-containing-protein
MDLIKKMCGSFDFTTISSELYALIPQDKTDVETAKKAVDYGYPGVAPILPVLIYWLQDLNWPVAQELTPFLAKIGAPLKQPVLDVLKTQDSIWKYWVVSELVDTTDLQLAKAIAPELQHLKLKTAASVDEDDISVNSAIDAILHKLQTQRP
>NZ_CP050150.1|WP_046449531.1|1125951_1126296_-|hypothetical-protein
MPNYYRLGNRTPANFTPRIADTVGPGAGLSMANTAPAVRAQVIDSALTQVTQIINTPTPGNPQHYSILPNPNVGQDLLDWAATREALLADNTWTNPLIGPYTTDVNTARTGQVN
>NZ_CP050150.1|WP_046449530.1|1126361_1127288_-|hypothetical-protein
MGKSPSIEEMEKKDKKSREYLDEIANELTNKLGNTYATLEKEAENFYQKEHEKPWSSDLYITGKQFDYQSVQDWSLASVSAIINKISAAVIGTVDGKVENLPAGTDAGDKAQDINKKYDMNKDKRLLIATNCFNLLAGIVGSFGNATSITVKHGTKSDPIGGGLRIFGSVGTQTFQRSSFFNNEKIATYQFAYIVRFSVEEFELQAKIALIDQYQNTLNVTKFASDKNDQQFFEDKITYEQWSVMSAKFEKVMEDVLKKIRELDPKKERGTQLAKEFISQNGLYRIFYSSNKHLLEAIKRREAGLLKI
>NZ_CP050150.1|WP_025800567.1|1127609_1128464_-|co-chaperone-YbbN
MLNNSVINVTEANLHQTLEQSASIPVLFYFWSERSQHCLQLNPILDKLASEYAGQFVLAKVDCDAEQMVASQFGLRAIPTVYLFKDGQPVDGFQGPQSEEFIRELLGRFLPKEEELKAAQAAEFIAEGKMAEALPLLKEARALDSKRSDIALMLAEVQIALNRSDEAETVLATIPMQDQDSRYQGLVAQIELLKQAADTPEIQLLQKQVDAEPENAVIAAQLALQLHQVGRNEEALELLMVHLRKDLTAADGAARKTLMDILAALGNGDALASKYRKQLYSLLY
>NZ_CP050150.1|WP_025800568.1|1128538_1129312_-|SDR-family-oxidoreductase
MQKAILITGCSSGIGLTAAQDLRNRGYRVLAACRKPQDVEVMRDLGMEGIELDLDDSESVERAAAEVIRITEGRLYALFNNGGFGLYGPLNTISRAELERQFATNLFGTHQLTQLLLPIMLPHGEGRIIQTSSVMGLVATPGRGAYAASKFALEGWSDALRMELHGSGIHVSLIEPGPINTRFTSNVHQMEKDKPVTNPGIAERFTLTPDAILPKLHHALESKRPKLRYPVTLVAHALTVLRRILPGRLLDKVLRGN
>NZ_CP050150.1|WP_096386600.1|1129366_1130008_-|multifunctional-acyl-CoA-thioesterase-I/protease-I/lysophospholipase-L1
MMNFKNIFRWHIPFLLLFSLLCGRAMAADTLLILGDSLSAGYRLPIADSWATRLAQQWQKTTPTVSVVNGSISGDTADQGLARLPALLKQHQPRWVLIELGANDGLRGFAPADIETALGKIITQVQQAKAQPLLMQIQLPPNYGRRYTEAFAAIYPKLAKQHQIPLIPFYMEQVALKPEWMQQDGLHPNGEAQPFIAQWMSEQLHPLLTNPHQ
>NZ_CP050150.1|WP_043491538.1|1129975_1130662_+|ABC-transporter-ATP-binding-protein
MPTENVLEVHHLAKEVGQGDSQLSILTGVELVVKPAQTLALIGESGSGKSTLLGILAGLDDGTSGEVSLLGQRLDQMDEEQRAALRARDVGFVFQSFMLVPTLTALENVQLPALLRGDSDRQSRQQAVQLLEQLGLGKRLNHLPAQLSGGEQQRVALARAFSGRPKVLFADEPTGNLDRHTGDRIADLLFSLNTDFDTTLILVTHDPQLAARCQRRMRLVEGVLQEEA

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Crispr_ID: NZ_CP050150_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050150_2

2882713-2883159

Orphan

I-F

Consensus_repeat	Method
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CRISPRCasFinder
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CRT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	PILER-CR

7 spacers

The CRISPR arrays of NZ_CP050150_2

>merge|NZ_CP050150|2|2882713-2883159|CRISPRCasFinder,CRT,PILER-CR
TACCTAAGCTGCCTGTACGGCAGTGAACCAGCACCGGCCCCCCCATAGCGTGCTGCATTTTTCTAAGCTGCCTGTACGGCAGTGAACAACTTTAAGTATTGCATTAGCCCTTCTAGCGCTTTCTAAGCTGCCTGTACGGCAGTGAACGAAGCACAAACTGGTCGCGAGGCGGTTAAGAATTTCTAAGCTGCCTGTACGGCAGTGAACCCACTAATCCCACGCCGTGATTTTTATCTGTATTTCTAAGCTGCCTGTACGGCAGTGAACCCAAAGAATCAACCAACGGGGCATTTTATCGTTTTCTAAGCTGCCTGTACGGCAGTGAACTTTACGTCACCCCTGAGCAATTCGGTGCGATATTTCTAAGCTGCCTGTACGGCAGTGAACCTAGCACTGGCGCGGCTACTGTTGCTGTTACTTTTCTAAGCTGCCTGTACGGCAGTGAAC

>NZ_CP050150|2|2|2882713-2883159|CRISPRCasFinder
TACCTAAGCTGCCTGTACGGCAGTGAAC	CAGCACCGGCCCCCCCATAGCGTGCTGCATT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	AACTTTAAGTATTGCATTAGCCCTTCTAGCGC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GAAGCACAAACTGGTCGCGAGGCGGTTAAGAA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CCACTAATCCCACGCCGTGATTTTTATCTGTA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CCAAAGAATCAACCAACGGGGCATTTTATCGT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TTTACGTCACCCCTGAGCAATTCGGTGCGATA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CTAGCACTGGCGCGGCTACTGTTGCTGTTACT
TTTCTAAGCTGCCTGTACGGCAGTGAAC

>NZ_CP050150|2|1|2882713-2883159|CRT
TACCTAAGCTGCCTGTACGGCAGTGAAC	CAGCACCGGCCCCCCCATAGCGTGCTGCATT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	AACTTTAAGTATTGCATTAGCCCTTCTAGCGC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GAAGCACAAACTGGTCGCGAGGCGGTTAAGAA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CCACTAATCCCACGCCGTGATTTTTATCTGTA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CCAAAGAATCAACCAACGGGGCATTTTATCGT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TTTACGTCACCCCTGAGCAATTCGGTGCGATA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CTAGCACTGGCGCGGCTACTGTTGCTGTTACT
TTTCTAAGCTGCCTGTACGGCAGTGAAC

>NZ_CP050150|2|1|2882772-2883159|PILER-CR
TTTCTAAGCTGCCTGTACGGCAGTGAAC	AACTTTAAGTATTGCATTAGCCCTTCTAGCGC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GAAGCACAAACTGGTCGCGAGGCGGTTAAGAA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CCACTAATCCCACGCCGTGATTTTTATCTGTA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CCAAAGAATCAACCAACGGGGCATTTTATCGT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TTTACGTCACCCCTGAGCAATTCGGTGCGATA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CTAGCACTGGCGCGGCTACTGTTGCTGTTACT
TTTCTAAGCTGCCTGTACGGCAGTGAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050150.1\|WP_025798093.1\|2889626_2889854_+\|YejL-family-protein	unknown	unknown	gnl\|CDD\|237471
NZ_CP050150.1\|WP_038502345.1\|2878425_2879448_+\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|226690
NZ_CP050150.1\|WP_166493357.1\|2873673_2875248_+\|cyclic-di-GMP-phosphodiesterase	unknown	unknown	gnl\|CDD\|182541
NZ_CP050150.1\|WP_166493360.1\|2892766_2893915_+\|diguanylate-cyclase	unknown	unknown	gnl\|CDD\|143635
NZ_CP050150.1\|WP_004089547.1\|2888030_2888315_+\|50S-ribosomal-protein-L25	unknown	unknown	gnl\|CDD\|180318
NZ_CP050150.1\|WP_043493971.1\|2881137_2881533_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|183333
NZ_CP050150.1\|WP_166493356.1\|2872741_2873377_+\|flavin-reductase-family-protein	unknown	unknown	gnl\|CDD\|224766
NZ_CP050150.1\|WP_166493358.1\|2882198_2882651_-\|DUF3828-domain-containing-protein	unknown	unknown	gnl\|CDD\|372360
NZ_CP050150.1\|WP_025798102.1\|2884825_2885548_-\|16S-rRNA-pseudouridine(516)-synthase-RsuA	unknown	unknown	gnl\|CDD\|236774
NZ_CP050150.1\|WP_166493359.1\|2886123_2887884_+\|DEAD/DEAH-box-helicase-family-protein	unknown	unknown	gnl\|CDD\|223989
NZ_CP050150.1\|WP_096388005.1\|2879449_2881057_+\|microcin-C-ABC-transporter-ATP-binding-protein-YejF	unknown	unknown	gnl\|CDD\|237917
NZ_CP050150.1\|WP_043493963.1\|2877328_2878426_+\|microcin-C-ABC-transporter-permease-YejB	unknown	unknown	gnl\|CDD\|185087
NZ_CP050150.1\|WP_096388003.1\|2875490_2877317_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|173862
NZ_CP050150.1\|WP_096388013.1\|2891877_2892318_-\|NUDIX-domain-containing-protein	unknown	unknown	gnl\|CDD\|240039
NZ_CP050150.1\|WP_046450255.1\|2885861_2886101_+\|YecH-family-protein	unknown	unknown	gnl\|CDD\|337821
NZ_CP050150.1\|WP_046359746.1\|2871555_2872503_-\|23S-rRNA-(adenine(1618)-N(6))-methyltransferase-RlmF	unknown	unknown	gnl\|CDD\|236964
NZ_CP050150.1\|WP_166493355.1\|2869282_2871505_+\|mechanosensitive-channel-protein	unknown	unknown	gnl\|CDD\|183147
NZ_CP050150.1\|WP_038502349.1\|2883504_2884716_-\|Bcr/CflA-family-multidrug-efflux-MFS-transporter	unknown	unknown	gnl\|CDD\|182964
NZ_CP050150.1\|WP_025798095.1\|2888410_2889418_-\|nucleoid-associated-protein-YejK	unknown	unknown	gnl\|CDD\|178993
NZ_CP050150.1\|WP_096388011.1\|2889883_2891668_+\|DUF3413-domain-containing-protein	unknown	unknown	gnl\|CDD\|225625

Protein	Function_ID	Function_description	E-value
NZ_CP050150.1\|WP_025798093.1\|2889626_2889854_+\|YejL-family-protein	gnl\|CDD\|237471	PRK13689, PRK13689, hypothetical protein; Provisional.	4.13199e-41
NZ_CP050150.1\|WP_038502345.1\|2878425_2879448_+\|ABC-transporter-permease-subunit	gnl\|CDD\|226690	COG4239, COG4239, ABC-type uncharacterized transport system, permease component [General function prediction only].	0
NZ_CP050150.1\|WP_166493357.1\|2873673_2875248_+\|cyclic-di-GMP-phosphodiesterase	gnl\|CDD\|182541	PRK10551, PRK10551, cyclic di-GMP phosphodiesterase.	0
NZ_CP050150.1\|WP_166493360.1\|2892766_2893915_+\|diguanylate-cyclase	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	2.3077e-59
NZ_CP050150.1\|WP_004089547.1\|2888030_2888315_+\|50S-ribosomal-protein-L25	gnl\|CDD\|180318	PRK05943, PRK05943, 50S ribosomal protein L25; Reviewed.	4.48936e-54
NZ_CP050150.1\|WP_043493971.1\|2881137_2881533_-\|hypothetical-protein	gnl\|CDD\|183333	PRK11835, PRK11835, hypothetical protein; Provisional.	5.10366e-72
NZ_CP050150.1\|WP_166493356.1\|2872741_2873377_+\|flavin-reductase-family-protein	gnl\|CDD\|224766	COG1853, COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family [General function prediction only].	4.92879e-35
NZ_CP050150.1\|WP_166493358.1\|2882198_2882651_-\|DUF3828-domain-containing-protein	gnl\|CDD\|372360	pfam12883, DUF3828, Protein of unknown function (DUF3828). This is a family of bacterial proteins of unknown function.	4.71878e-09
NZ_CP050150.1\|WP_025798102.1\|2884825_2885548_-\|16S-rRNA-pseudouridine(516)-synthase-RsuA	gnl\|CDD\|236774	PRK10839, PRK10839, 16S rRNA pseudouridine(516) synthase RsuA.	1.07929e-172
NZ_CP050150.1\|WP_166493359.1\|2886123_2887884_+\|DEAD/DEAH-box-helicase-family-protein	gnl\|CDD\|223989	COG1061, SSL2, DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair].	8.60664e-96
NZ_CP050150.1\|WP_096388005.1\|2879449_2881057_+\|microcin-C-ABC-transporter-ATP-binding-protein-YejF	gnl\|CDD\|237917	PRK15134, PRK15134, microcin C ABC transporter ATP-binding protein YejF; Provisional.	0
NZ_CP050150.1\|WP_043493963.1\|2877328_2878426_+\|microcin-C-ABC-transporter-permease-YejB	gnl\|CDD\|185087	PRK15133, PRK15133, microcin C ABC transporter permease YejB; Provisional.	0
NZ_CP050150.1\|WP_096388003.1\|2875490_2877317_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|173862	cd08497, PBP2_NikA_DppA_OppA_like_14, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold. This CD represents the substrate-binding domain of an uncharacterized ATP-binding cassette (ABC) type nickel/dipeptide/oligopeptide-like transporter. The oligopeptide-binding protein OppA and the dipeptide-binding protein DppA show significant sequence similarity to NikA, the initial nickel receptor. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	0
NZ_CP050150.1\|WP_096388013.1\|2891877_2892318_-\|NUDIX-domain-containing-protein	gnl\|CDD\|240039	cd04683, Nudix_Hydrolase_24, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required.	9.05071e-44
NZ_CP050150.1\|WP_046450255.1\|2885861_2886101_+\|YecH-family-protein	gnl\|CDD\|337821	pfam10678, DUF2492, Protein of unknown function (DUF2492). This is a bacterial family of uncharacterized proteins.	9.51555e-40
NZ_CP050150.1\|WP_046359746.1\|2871555_2872503_-\|23S-rRNA-(adenine(1618)-N(6))-methyltransferase-RlmF	gnl\|CDD\|236964	PRK11727, PRK11727, 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF.	0
NZ_CP050150.1\|WP_166493355.1\|2869282_2871505_+\|mechanosensitive-channel-protein	gnl\|CDD\|183147	PRK11465, PRK11465, putative mechanosensitive channel protein; Provisional.	0
NZ_CP050150.1\|WP_038502349.1\|2883504_2884716_-\|Bcr/CflA-family-multidrug-efflux-MFS-transporter	gnl\|CDD\|182964	PRK11102, PRK11102, Bcr/CflA family multidrug efflux MFS transporter.	0
NZ_CP050150.1\|WP_025798095.1\|2888410_2889418_-\|nucleoid-associated-protein-YejK	gnl\|CDD\|178993	PRK00378, PRK00378, nucleoid-associated protein NdpA; Validated.	0
NZ_CP050150.1\|WP_096388011.1\|2889883_2891668_+\|DUF3413-domain-containing-protein	gnl\|CDD\|225625	COG3083, COG3083, Predicted hydrolase of alkaline phosphatase superfamily [General function prediction only].	0

>NZ_CP050150.1|WP_166493358.1|2882198_2882651_-|DUF3828-domain-containing-protein
MSRLLILLFFISSPVFAVSDINNATKAALEFNKWYLQQIEKDVYPLLGNRSPEMSEYVTAETLGKLHKAVNSDDEFYDADFFTRSQDIGADWPKNVTVVSSDLDPVCLNVYVAYGKDMSHTVIDCMVREKGKWKIQSVAQQAIVPNENLK
>NZ_CP050150.1|WP_043493971.1|2881137_2881533_-|hypothetical-protein
MNSFQLSIVHRLPQSYRWSSGLTGVQVEPIYLAKTTGAENTDVNNTVIDNNAIDNNSLIGLKLLSEEGEAAWQIMKRLNQSLQEMQVNCSVVELDGEPCLFVHLEDESAAMCRLKNVGVAIAEPIVAQYPF
>NZ_CP050150.1|WP_096388005.1|2879449_2881057_+|microcin-C-ABC-transporter-ATP-binding-protein-YejF
MAKHSQPPLLSIRDLNICFRSGEVTRPVVNGVSLEINAGETLALVGESGSGKSVTALSILRLLSSPPAEYPQGDILFNGQSLLHATEPYLRSVRGNEIAMIFQEPMVSLNPLHSIEKQLAEVLSLHRGMRRTQARAEILRCLERVGIRSPEKRLNDYPHQLSGGERQRIMIAMAILTRPKLLIADEPTTALDVSVQAQILELLAELKQELNMGMLFITHNLNIVKRLADRVAVMHDGNIVEIGECQSLFAAPQHPYTKQLLDAIPSGDPVALPQPTQTLLEVKDLSVRFPIRQGILRRTVGYNAIVNQLNFTLRRGESLGLVGESGSGKSTTGLALLRLLPSQGEIWFEGTPLHQLNLKQLQPYRSQIQVVFQDPYSALNPRLNVQQIIAEGLQVHQKLSAQEREQRVISAMTEVGLDPETRHRYPTEFSGGQRQRIAIARALILEPRLLILDEPTSSLDRSVQAQILALLKNLQQRHQLTYLFISHDLQVVRSLCHQVMVMRNGKVIEHGDCAEVFARPAQDYTRQLLAFADTP
>NZ_CP050150.1|WP_038502345.1|2878425_2879448_+|ABC-transporter-permease-subunit
MKLNPINQARWQRFKTNRRGYWSMWIFLLVFIMSLGSELIANDKPLLLRYDQHWYAPFLVNYPETTFGGDFKTATDYQDPLIRSNIEQHGWAIWAPIRYSYNSINFATEVPFPSPPSAQHWLGTNENGNDILAQVLYGLRVSILFGLMLTVLSSVIGITVGATQGFYGGKVDLIGQRFIEVWSGMPTLFLIILLSSVVQPNFWWLLAITVIFGWMGLVGVVRAEFLRTRNFDYIRAARAMGVSDRTIMLRHMLPNAMVATLTFLPFILCGAITTLTSLDFLGFGLPTGSPSLGSLLLQGKNNLQAPWLGITAFAVLAILLSLLIFMFEAVRDAFDPSKVN
>NZ_CP050150.1|WP_043493963.1|2877328_2878426_+|microcin-C-ABC-transporter-permease-YejB
MTAYLIRRLLLIIPTLWAIITINFFIVQIAPGGPVDQAIANIEMGQNAGFGAGGGAHVGAAHTGIAASNVGEGQYRGARGLDPQIIAEIEKRFGFDKPLHQRYFDMLWNYIRFDFGDSLFRGGSVMSLVKQSLPVSVSLGLWSTLIIYLVSIPLGIRKAVHNGSRFDTWSSTLIIIGYAIPAFLFAIMLIVLFAGGSYWDWFPLRGLVSSNFSSLSWYDKITDYLWHITLPVLATVIGGFASLTMLTKNSFLDEVRKQYVVTARAKGLDDKKILYRHVFRNAMLLVIAGFPATFISMFFTGSLLIEVMFSLNGLGLLGYDAILQRDYPVMFGTLYIFTLLGLLLNIISDITYTLVDPRIDFEARH
>NZ_CP050150.1|WP_096388003.1|2875490_2877317_+|ABC-transporter-substrate-binding-protein
MYSRLLKTLCTVVPIVAAFSFNLRADVINESYAFAILGEPKYSSDFTHFDYVNPAAPKGGDITLSALGTYDSFNSYASRGHPAVRANQLYDTLFTNSADEIGSYYPLIGETVRYDDKFSWAEVNINADARFQDNTPITAQDVQFSFNKFMTEGVPQYRSYYQGVKVKAISRLTVRFELPKPDKEMMLSLIGGLKVMPESFWKNHKLSEPLNTPPLGSGPYRISDYRLGQFVTYSRVTNYWAANLPVNRGQYNFDTIRYDYYLDDKVALEAFKAGAFDFRMETSPKNWATQYSGGNFAKNYIVKSDETNQSAQDTRWLAFNTQRPIFADRRVREAISLAFDFEWMNKALYYDAYQRTNSYFQNTQYAARGYPDSAELAWLAPLKGKIPAEVFNQVYQPAATDGSGNDRENLLKATKLLEDAGWTIKDQRLVNKVTGKPFAFELLLPSSSNFQYVMPFKHNLEKLGITLNLREVDTSQYSNRVRSRDFDMFPTVYGGMNYPDPSLKILWRSDYISSTWNSAGVQDPAVDSLIDSIISHQGQPDALLSLGRALDRVLTWNYYMLPMWYSNHDRIAYWDKFSMPALRPAYDLGFDTWWYDINRAANLPQQRR
>NZ_CP050150.1|WP_166493357.1|2873673_2875248_+|cyclic-di-GMP-phosphodiesterase
MVLPSALYRKPVSTSLRILISTLIAALVAIVFVILAGHAIQHQRQNQQYELAKTGLMYATHLADDLDQKMVSLLPLTALDCESVVNTLASKAVFSGGVRAYILVRDGIAVCSSVTHSMSSPASKIYPKLDLNRDSDMVLQQGTPLVPDRPVIAFWHSIGDGTRTGVLLTLDINPAPYMLFFSRERTISGLALTIKDRAISTFEPKIVAESALPAHPDIIMQDEKNRFTFRLYGSPLSAGDLGLLGLVTLLVAMVAWLITFYVLSQQRRLDRDILQGIKRGQFFLVYQPVIHSETQLPGGFEALIRWKHPKLGLVPPDEFIPYCESEGLIDRLTQHIMELAAQDAHRLIDFVPKGTKLGLNISPLHMTLDSFKADVRHFLDLMPTEHFIPLFEITERSMVQDGGAEKIFDWLHACGIELAIDDFGTGHSALIYLQRYKIDYLKIDRGFVNSIGLETVTAPVLDAVLELAQKLKLQIVAEGIETEEQAEYLRQRHVDYLQGYLFCRPLPLEQLCDYYQQNVNGKLV
>NZ_CP050150.1|WP_166493356.1|2872741_2873377_+|flavin-reductase-family-protein
MSSPFEYYSYQPRQGHGLSHDPLNAIIGPRPIGWISSISADGKHNLAPYSFFNCFSYHPPVIGFASSGWKDSVANINETGEFVWNLATIETAAAMNQSSAALSRGEDEFVFSGVNMQTSQWVKAARVAESPVNFECKLTQCIQLQDQYGQPFDSWLILGEVIGIHIAKNLLNNQGVYQTAAANPILRAGGPSAYYTISDENRFDMLRPIIK
>NZ_CP050150.1|WP_046359746.1|2871555_2872503_-|23S-rRNA-(adenine(1618)-N(6))-methyltransferase-RlmF
MKNPKKKNFPAQKTNLHPRNLHRERYDFPTLCETSPELKAFVFRNQWGDDSIDFAEPLAVKALNSALLKHFYQVEHWDIPEGYLCPPIPGRADYLHYLADVLAADHGYQVPRGQNVCILDIGVGANCIYPLIGQHAYGWRFTGTEVDAVALKSAGAVIKANPQAAKNIRLRQQQDPNKILKGAIKSGEHYAATMCNPPFHRSAEDALSGTRRKLTNLGRDASAPVLNFGGKAGELWCEGGEVAFITKMIEESESFAKQVGWFTSLVSRQENLPAIYEALEEVEALDVRTIEMSQGQKVSRFIAWTFLPENKRKIR
>NZ_CP050150.1|WP_166493355.1|2869282_2871505_+|mechanosensitive-channel-protein
MPQGARLIPFFNRYFVLLTVLFFSCSTSVNAVEPQKETDSKAAYSALADILSDTNSRDALIAELRDSAKTGKPLAEKSASTVPAETRDETFADQLDSNIQGYLTVAQSKLDRLITALKSPPHKTFNPQTFWPALTHFLFTVAVTFALFLAIRFFATPFYKRIGSWGHKAREKRADWARRPTAIISAFVIDLLILLFCVTAGNIIATTFGTNSPVTMRQQALFLNAFALIEFFKAILRLIFAPKFDYLRPFPFSDATAKYWNTRLAWLSGLIGYGLMVVVPIIQVQLGASSAVLVNFCIMLALTVYAIGLILVNRLRIQKEITALGNRSLAFFGVFLHALSHIWHILAIVYFLVLFLLSQFDPGSSLAFMMSATIKSLIVVGSGALISGLLTRWISRRITLPADIKLKYPMLERRVNSYIPSALQIMRFIVVVAILLFLLDAWHIFGLRAWLDSATGEKIIGGLVHILLIMFIAVLGWTLLASVIEHRLSLEMDNPKHPGARERTLLTLFRNVLSIVITTITVMIILSQIGINIAPLLAGAGALTLAVSFGAQTLVKDVINGIFIQFENGMNTGEYVTVFGITGTVERMTIRSIGLRDDYGVYHLVPYSSITTVANYAREFGVYRANYVISRDEDIEKANEVLKQAVAELRDNPRLKSLLIGEPAFNGVVKLDDVSFTLRTTIRTVALQQWTIQYALDKLVKEHFQRAGIKTPHQNVQISYAAPEQQALLPPQNDTNNVEK
>NZ_CP050150.1|WP_038502349.1|2883504_2884716_-|Bcr/CflA-family-multidrug-efflux-MFS-transporter
MQTPRSSHLGLILILGLLSMLMPLAIDMYLPSMPVIAEQFGVPSGDVQMTLSAYTLGFAFGQMLYGPMADSIGRKPVIMYGTLFFALAGAACAMAQSVDQLIVMRLIHGLAAAAASVVINALMRDMFTKDDFARMMSFVVLVMTIAPLLAPIMGGALLIWFSWHAIFWAMAGAALLGTVLVAIFIKETLPKEKRQKFRLRTTLGNFASLFRHKRVLCYMLASGFSFAGMFSFLSAGPFVYIDLNGVSPQHFGYYFALNIVFLFIMTLINSRNVRRFGAINMLRFGLLVQFVMGIWLVITAMLDLGFWSLVIGVAAYVGCIAMITSNAMAVILDDFPHMAGTASSLAGTLRFSLGAVVGTLLALASARSEWPMVSSMFLCIFAAMMLFLYASRPAKASNRIDPA
>NZ_CP050150.1|WP_025798102.1|2884825_2885548_-|16S-rRNA-pseudouridine(516)-synthase-RsuA
MRLDKFLSQQLGISRALIARELRAKRVTVDGEVVKSGAHKLTPEQEVAFDGQVLEQIHGPRYFMLHKPEGYVCSTDDPDHSTILYFIEEPLAEKLHAAGRLDLDTTGLVLLTDDGQWSHRITSPKHQCDKTYLVTLEHPLADDTAEQFAQGVQLHGEKDLTKPATLEQLDANVVRLTISEGRYHQVKRMFAAVGNRVVELHRERIGDIVLDEDLEPGEYRPLTEEEIASVGLPAELLAKD
>NZ_CP050150.1|WP_046450255.1|2885861_2886101_+|YecH-family-protein
MSSIHGHEVLNMMIESGEQFSTESLVATIEQRFGADARFHTCSQQDLTAAQLVEFLASRGKFIPSDSGFNTHSSKICQH
>NZ_CP050150.1|WP_166493359.1|2886123_2887884_+|DEAD/DEAH-box-helicase-family-protein
MAFTLRPYQREAVEATIAHFRKHQEPAVIVLPTGAGKSLVIAELAKIARGRVLVLAHVKELVAQNHSKYCAYGLEADIFSAGLQQKESRGKVVFGSVQSVARNLPLFDGEFSLLIVDECHRISDSDDSQYQQILQHLRNNNPKLRLLGLTATPYRLGKGWIYQYHYHGITRGDSNSLFRDCIYELPLRYMIKNQFLVPPERLDMPVVQYDFSRLEPSSNGLFREVDLNRELKDQQRITPHIVSQIMEFAATRKGVMIFASTVEHAREIHGLLPPEQAALVSAETPGDERDAIINAFKRQELLYLVNVAVLTTGFDAPHVDLIAILRPTESISLYQQIVGRGLRLSPGKTDCLILDYAGNPHDLFTPEVGTTKPHSDSQPVQVFCPGCGFANTFWGKTTENGDIIEHYGRRCQGWLEDDEGGREQCDYRFRFKTCPHCGAENDIAARRCHQCNQVLVDPDDMLKEALKLKDALVLRCGGMQLQHGEDDKGEWLSITYYDEDGADVSERFRLNTPAQRTAFMQLFLRPHLRAPGIELVWKKAADVVAQQDKLRYPDFVVARMKGRFWQIRQKVFDYQGRYRKADSLSG
>NZ_CP050150.1|WP_004089547.1|2888030_2888315_+|50S-ribosomal-protein-L25
MFTIEATARKEQGKGASRRLRTSGKFPAIVYGGNQEPVAVEIDHDTTWNMQEKEGFYEQVIALMIDGKETKVKVQAVQRHPFKRKLTHVDFVRA
>NZ_CP050150.1|WP_025798095.1|2888410_2889418_-|nucleoid-associated-protein-YejK
MSLDLEQIALHQLVKRDEQQLDVVLRDSLLAKNAAVEEMMAELHRVYSAKSKAYGTFSEESELAEALRNYRRGNEDFLAFSRAATGRLRDELAKYPFADGGVVLFCQYRYLAVEYLLIAVLNSCSSMRVNEELDISSTHYLDIMRADIVARVDLTEWETNPESHRYLTFLKGRVGRKVSDFFMDFLAASEGLDAKAQNRGLLQAVDDYCAEGQLDKNERQAYRQQVYSYCNGQLQAGEEIELEALAKEIPAVGEKDFQQFTAEQGYDLEESFPADRSTLRQLTKMAGSGGGLTINFDAMLLGERIFWDPATDTLTIKGTPPNLRDQLQRRSGGGN
>NZ_CP050150.1|WP_025798093.1|2889626_2889854_+|YejL-family-protein
MPQSSRYSDEHVEQLLSELANVLESHHTPNDLSLMVLGNMVTNLINTSIAPAQRRAIARSFAEALQASIREDKAH
>NZ_CP050150.1|WP_096388011.1|2889883_2891668_+|DUF3413-domain-containing-protein
MVTNRQRYREKVSQMISWGHWFALFNILLGLLLGSRYLFVADWPSSLFGRVYAMISWLGHFSFIGFAAYLLIIFPLTFVVMSQRLLRFLSAALATAGLTLLLVDAEVFTRFHLHLNPVVWELVVNPDQGELARDWQLMFICVPVIFLVEMLFGTWSWQKLRSLNRQKFGKPLAGLFITAFFASHLIYIWADANFYRPITMQRSNLPLSYPMTARRFLEKHGLLDAQEFQNKLTQTGSPEAVSVEYPLNKLSFADKGAGYNLLVIAVDGLRADDLKQDLPQLAAFGNDNLEFTQHYSSGNNLDNGLFGLFYGISPSYLEGILAGRKPSALISALSQQNYQFGLFSSDGFSAPLYRQALLTDFSLPAPIRQSDAATTKQWQQWLSTQTTQSPWFSYVNLNGTRSALADASQHKPEDYMVRYQRAAEGVDGQIAAILNTLKQRGELDKTVVVITASHGIEFNDSGKGDWGFGTNYSRYQLQVPLIIHWPGTPAQTINKLTSHEDVMATLMQRLLHVDTRAVDYTQGEDLFAPTRKHNWLALGDSSELVIVTPKETVILDKNGRYRTYDADNEEMKGEKPQLALLLQVLTDVKRFIAN
>NZ_CP050150.1|WP_096388013.1|2891877_2892318_-|NUDIX-domain-containing-protein
MSKFQPYLAVYIIVRQQQRILLLQRKNTGFDDGKWSLPAGHVEEGESALTAAIREAEEEIGIVIPSSALNLVYTLHRKSDERTYIDLWFEAERFDGVPINQEPDKCAGLMWSDVQNLPENTQEFVRMALNDMQASRYGSIGLDMVC
>NZ_CP050150.1|WP_166493360.1|2892766_2893915_+|diguanylate-cyclase
MIELTEKNAQSRTLTLHNRLKVAEIRAVKMNVSWLLSVQIAFVLFVFCREYFYVSHNIPAAPVISTVLEHALIVIMAILCGYMIVLRFTRVLEKQFKPAMLVITLSIGVIWCFILSLLFYSEFGHLIFAISTLLMLSSLIALYPSSHHLFFATTPIWAIIVAHAMFFSGTLSLVYLAGYLVFAVLFETGRRLLRRWFVLAVMREHQNVRLANKLTLMSQQDPLTALANRRYFDHALQRAIEAATKTAQPLSIILIDVDYFKKYNDRYGHQAGDSCLTQLAKCFQQTVRNAQDLVGRYGGEEFIILLPDQDKHAAEKVAERLKISVFALALPHDQSDVSPYVSLSQGIAQWRNGMDAKTLIENADRALYLAKQQGRNTARLAP

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Crispr_ID: NZ_CP050150_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050150_3

2953539-2954946

TypeI-F

I-F

Consensus_repeat	Method
TTTCTAAGCTGCCTGTACGGCAGTGAAC	PILER-CR
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CRISPRCasFinder
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CRT

23 spacers

cas1,cas3f,cas8f,cas5f,cas7f,cas6f

The CRISPR arrays of NZ_CP050150_3

>merge|NZ_CP050150|3|2953539-2954946|PILER-CR,CRISPRCasFinder,CRT
TTTGTAGGCTGCCTGTACGGCAGTGAACGATTCCTCCTGATATGATCCGTTGCGTGTAGTTTTCTAAGCTGCCTGTACGGCAGTGAACCGTCATCGGATCGCAGCAAAGTCTTTGTTGAATTTCTAAGCTGCCTGTACGGCAGTGAACTCTATGACTAGTAACGCATCTTTCAATACGCCTTTCTAAGCTGCCTGTACGGCAGTTAACCTCGGGTTTTGGGTGGCGTGACGGCGTCAGCTTTTCTAAGCTGCCTGTACGGCAGTTAACCAATCAACTAAGCAATCAGTAGCGCACTGGATTTTCTAAGCTGCCTGTACGGCAGTGAACGTTTGAATACCGGTTATGCATGGATTAAGTCATTTCTAAGCTGCCTGTACGGCAGTGAACGGCAAGGGATGGATTCACGCTTAACTAGGCTCTTTCTAAGCTGCCTGTACGGCAGTGAACATCGTCTTCTGTGCTCATGTTGTCAGAAGCGATTTCTAAGCTGCCTGTACGGCAGTGAACGTAAATAATATGAGCGCTTATAAAAGCCGAAATTTCTAAGCTGCCTGTACGGCAGTGAACATCTATCAACATTTGACGCGGTATTCGCTGTGTTTCTAAGCTGCCTGTACGGCAGTGAACGGATGCAAATTGACATCCCCGTCAGCTGTCCGTTTCTAAGCTGCCTGTACGGCAGTGAACTTGCTAATACTAATTTGTGTACTTCCATCAATTTTCTAAGCTGCCTGTACGGCAGTGAACCACAAGGCCAGCTATGCGGTTCATGCGTTCAATTTCTAAGCTGCCTGTACGGCAGTGAACATGTCCGCAGGTATCGAGAATCCAGAAATGGTTTTCTAAGCTGCCTGTACGGCAGTGAACCAGCGAACCAGCCGCTAGCAGAATATCACCAATTTCTAAGCTGCCTGTACGGCAGTGAACACTACAGCGAGTTAAAGCTCATGCAGCGTGCATTTCTAAGCTGCCTGTACGGCAGTGAACTGAACTGAGCAAGCTATTTGCAATGGTTTTGTTTTCTAAGCTGCCTGTACGGCAGTGAACGCGGTTTCACGTGCGATCACTGCTGGTGACACTTTCTAAGCTGCCTGTACGGCAGTGAACTCCAACAAATCGCGTGATTGTCCTCGTGTATATTTCTAAGCTGCCTGTACGGCAGTGAACGCGTACAGACAGTTAGCCATCCATCACTAAAATTTCTAAGCTGCCTGTACGGCAGTGAACCGTTAACCCACAGAAGTCTGACGTATAAAATATTTCTAAGCTGCCTGTACGGCAGTGAACACGGGGATCAGGCGAACGGTGTTTAGCCTCACTTTCTAAGCTGCCTGTACGGCAGTGAACAATTTCTAGCGTTAGCTCATATCCTTCGTCGATTTCTAAGCTGCCTGTACGGCAGTGAAC

>NZ_CP050150|3|2|2953539-2954946|PILER-CR
TTTGTAGGCTGCCTGTACGGCAGTGAAC	GATTCCTCCTGATATGATCCGTTGCGTGTAGT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CGTCATCGGATCGCAGCAAAGTCTTTGTTGAA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TCTATGACTAGTAACGCATCTTTCAATACGCC
TTTCTAAGCTGCCTGTACGGCAGTTAAC	CTCGGGTTTTGGGTGGCGTGACGGCGTCAGCT
TTTCTAAGCTGCCTGTACGGCAGTTAAC	CAATCAACTAAGCAATCAGTAGCGCACTGGAT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GTTTGAATACCGGTTATGCATGGATTAAGTCA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GGCAAGGGATGGATTCACGCTTAACTAGGCTC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	ATCGTCTTCTGTGCTCATGTTGTCAGAAGCGA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GTAAATAATATGAGCGCTTATAAAAGCCGAAA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	ATCTATCAACATTTGACGCGGTATTCGCTGTG
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GGATGCAAATTGACATCCCCGTCAGCTGTCCG
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TTGCTAATACTAATTTGTGTACTTCCATCAAT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CACAAGGCCAGCTATGCGGTTCATGCGTTCAA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	ATGTCCGCAGGTATCGAGAATCCAGAAATGGT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CAGCGAACCAGCCGCTAGCAGAATATCACCAA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	ACTACAGCGAGTTAAAGCTCATGCAGCGTGCA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TGAACTGAGCAAGCTATTTGCAATGGTTTTGT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GCGGTTTCACGTGCGATCACTGCTGGTGACAC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TCCAACAAATCGCGTGATTGTCCTCGTGTATA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GCGTACAGACAGTTAGCCATCCATCACTAAAA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CGTTAACCCACAGAAGTCTGACGTATAAAATA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	ACGGGGATCAGGCGAACGGTGTTTAGCCTCAC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	AATTTCTAGCGTTAGCTCATATCCTTCGTCGA
TTTCTAAGCTGCCTGTACGGCAGTGAAC

>NZ_CP050150|3|3|2953539-2954946|CRISPRCasFinder
TTTGTAGGCTGCCTGTACGGCAGTGAAC	GATTCCTCCTGATATGATCCGTTGCGTGTAGT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CGTCATCGGATCGCAGCAAAGTCTTTGTTGAA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TCTATGACTAGTAACGCATCTTTCAATACGCC
TTTCTAAGCTGCCTGTACGGCAGTTAAC	CTCGGGTTTTGGGTGGCGTGACGGCGTCAGCT
TTTCTAAGCTGCCTGTACGGCAGTTAAC	CAATCAACTAAGCAATCAGTAGCGCACTGGAT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GTTTGAATACCGGTTATGCATGGATTAAGTCA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GGCAAGGGATGGATTCACGCTTAACTAGGCTC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	ATCGTCTTCTGTGCTCATGTTGTCAGAAGCGA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GTAAATAATATGAGCGCTTATAAAAGCCGAAA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	ATCTATCAACATTTGACGCGGTATTCGCTGTG
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GGATGCAAATTGACATCCCCGTCAGCTGTCCG
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TTGCTAATACTAATTTGTGTACTTCCATCAAT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CACAAGGCCAGCTATGCGGTTCATGCGTTCAA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	ATGTCCGCAGGTATCGAGAATCCAGAAATGGT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CAGCGAACCAGCCGCTAGCAGAATATCACCAA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	ACTACAGCGAGTTAAAGCTCATGCAGCGTGCA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TGAACTGAGCAAGCTATTTGCAATGGTTTTGT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GCGGTTTCACGTGCGATCACTGCTGGTGACAC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TCCAACAAATCGCGTGATTGTCCTCGTGTATA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GCGTACAGACAGTTAGCCATCCATCACTAAAA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CGTTAACCCACAGAAGTCTGACGTATAAAATA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	ACGGGGATCAGGCGAACGGTGTTTAGCCTCAC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	AATTTCTAGCGTTAGCTCATATCCTTCGTCGA
TTTCTAAGCTGCCTGTACGGCAGTGAAC

>NZ_CP050150|3|2|2953539-2954946|CRT
TTTGTAGGCTGCCTGTACGGCAGTGAAC	GATTCCTCCTGATATGATCCGTTGCGTGTAGT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CGTCATCGGATCGCAGCAAAGTCTTTGTTGAA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TCTATGACTAGTAACGCATCTTTCAATACGCC
TTTCTAAGCTGCCTGTACGGCAGTTAAC	CTCGGGTTTTGGGTGGCGTGACGGCGTCAGCT
TTTCTAAGCTGCCTGTACGGCAGTTAAC	CAATCAACTAAGCAATCAGTAGCGCACTGGAT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GTTTGAATACCGGTTATGCATGGATTAAGTCA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GGCAAGGGATGGATTCACGCTTAACTAGGCTC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	ATCGTCTTCTGTGCTCATGTTGTCAGAAGCGA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GTAAATAATATGAGCGCTTATAAAAGCCGAAA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	ATCTATCAACATTTGACGCGGTATTCGCTGTG
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GGATGCAAATTGACATCCCCGTCAGCTGTCCG
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TTGCTAATACTAATTTGTGTACTTCCATCAAT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CACAAGGCCAGCTATGCGGTTCATGCGTTCAA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	ATGTCCGCAGGTATCGAGAATCCAGAAATGGT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CAGCGAACCAGCCGCTAGCAGAATATCACCAA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	ACTACAGCGAGTTAAAGCTCATGCAGCGTGCA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TGAACTGAGCAAGCTATTTGCAATGGTTTTGT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GCGGTTTCACGTGCGATCACTGCTGGTGACAC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TCCAACAAATCGCGTGATTGTCCTCGTGTATA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GCGTACAGACAGTTAGCCATCCATCACTAAAA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CGTTAACCCACAGAAGTCTGACGTATAAAATA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	ACGGGGATCAGGCGAACGGTGTTTAGCCTCAC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	AATTTCTAGCGTTAGCTCATATCCTTCGTCGA
TTTCTAAGCTGCCTGTACGGCAGTGAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050150.1\|WP_166493364.1\|2942413_2942671_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050150.1\|WP_025797993.1\|2957680_2958589_+\|uridine-diphosphate-N-acetylglucosamine-binding-protein-YvcK	unknown	unknown	gnl\|CDD\|211689
NZ_CP050150.1\|WP_166493369.1\|2947800_2949087_-\|type-I-F-CRISPR-associated-protein-Csy1	cas8f	cd09735_cas8f_CAS-I-F	gnl\|CDD\|187866
NZ_CP050150.1\|WP_166493370.1\|2949111_2952390_-\|type-I-F-CRISPR-associated-helicase-Cas3	cas3f	cd09673_cas3f_CAS-I-F	gnl\|CDD\|187804
NZ_CP050150.1\|WP_166493371.1\|2952386_2953418_-\|type-I-F-CRISPR-associated-endonuclease-Cas1	cas1	cd09718_cas1_CAS-I-F	gnl\|CDD\|132676
NZ_CP050150.1\|WP_043494066.1\|2955779_2956262_-\|cyclic-pyranopterin-monophosphate-synthase-MoaC	unknown	unknown	gnl\|CDD\|236483
NZ_CP050150.1\|WP_166493366.1\|2944181_2945225_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226122
NZ_CP050150.1\|WP_166493368.1\|2946850_2947801_-\|type-I-F-CRISPR-associated-protein-Csy2	cas5f	cd09676_cas5f_CAS-I-F	gnl\|CDD\|378221
NZ_CP050150.1\|WP_025797986.1\|2962580_2963126_-\|porin	unknown	unknown	gnl\|CDD\|284781
NZ_CP050150.1\|WP_166493373.1\|2963514_2964948_+\|catalase	unknown	unknown	gnl\|CDD\|163712
NZ_CP050150.1\|WP_025797991.1\|2960080_2961292_+\|tyrosine-transporter-TyrP	unknown	unknown	gnl\|CDD\|185086
NZ_CP050150.1\|WP_166493367.1\|2945827_2946826_-\|type-I-F-CRISPR-associated-protein-Csy3	cas7f	pfam09615_cas7f_CAS-I-F	gnl\|CDD\|378222
NZ_CP050150.1\|WP_166493365.1\|2943096_2944182_+\|acyltransferase	unknown	unknown	gnl\|CDD\|224748
NZ_CP050150.1\|WP_025798000.1\|2955540_2955783_-\|molybdopterin-synthase-sulfur-carrier-subunit	unknown	unknown	gnl\|CDD\|182985
NZ_CP050150.1\|WP_166493363.1\|2941707_2942286_-\|flavodoxin-family-protein	unknown	unknown	gnl\|CDD\|223728
NZ_CP050150.1\|WP_025797995.1\|2956298_2957285_-\|GTP-3',8-cyclase-MoaA	unknown	unknown	gnl\|CDD\|234672
NZ_CP050150.1\|WP_096388043.1\|2961472_2962498_+\|tryptophan--tRNA-ligase	unknown	unknown	gnl\|CDD\|183400
NZ_CP050150.1\|WP_046449890.1\|2945260_2945815_-\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	cas6f	cd09739_cas6f_CAS-I-F:CAS-IV	gnl\|CDD\|378224
NZ_CP050150.1\|WP_025798003.1\|2955085_2955538_-\|molybdopterin-synthase-catalytic-subunit-MoaE	unknown	unknown	gnl\|CDD\|182642
NZ_CP050150.1\|WP_166493372.1\|2958678_2959872_-\|nicotinamide-mononucleotide-deamidase-related-protein-YfaY	unknown	unknown	gnl\|CDD\|179629

Protein	Function_ID	Function_description	E-value
NZ_CP050150.1\|WP_025797993.1\|2957680_2958589_+\|uridine-diphosphate-N-acetylglucosamine-binding-protein-YvcK	gnl\|CDD\|211689	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related. This model represents a subfamily of conserved hypothetical proteins that forms a sister group to the family of CofD, (TIGR01819), LPPG:Fo 2-phospho-L-lactate transferase, an enzyme of cytochrome F420 biosynthesis. Both this family and TIGR01819 are within the scope of the pfam01933. [Hypothetical proteins, Conserved].	7.23094e-119
NZ_CP050150.1\|WP_166493369.1\|2947800_2949087_-\|type-I-F-CRISPR-associated-protein-Csy1	gnl\|CDD\|187866	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins; Predicted subunit of the Cascade complex; signature gene for I-F subtype; also known as Csy1 family.	2.14262e-154
NZ_CP050150.1\|WP_166493370.1\|2949111_2952390_-\|type-I-F-CRISPR-associated-helicase-Cas3	gnl\|CDD\|187804	cd09673, Cas3_Cas2_I-F, CRISPR/Cas system-associated protein Cas3/Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas3/Cas2 fusion; This protein includes both DEAH and HD motifs for helicase and N-terminal domain corresponding to Cas2 RNAse; signature gene for Type I and subtype I-F.	0
NZ_CP050150.1\|WP_166493371.1\|2952386_2953418_-\|type-I-F-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|132676	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the YPEST subtype of CRISPR/Cas system.	0
NZ_CP050150.1\|WP_043494066.1\|2955779_2956262_-\|cyclic-pyranopterin-monophosphate-synthase-MoaC	gnl\|CDD\|236483	PRK09364, moaC, cyclic pyranopterin monophosphate synthase MoaC.	9.30592e-103
NZ_CP050150.1\|WP_166493366.1\|2944181_2945225_+\|hypothetical-protein	gnl\|CDD\|226122	COG3594, NolL, Fucose 4-O-acetylase and related acetyltransferases [Carbohydrate transport and metabolism].	2.79852e-12
NZ_CP050150.1\|WP_166493368.1\|2946850_2947801_-\|type-I-F-CRISPR-associated-protein-Csy2	gnl\|CDD\|378221	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2464 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy2, for CRISPR/Cas Subtype Ypest protein 2.	1.63052e-131
NZ_CP050150.1\|WP_025797986.1\|2962580_2963126_-\|porin	gnl\|CDD\|284781	pfam07437, YfaZ, YfaZ precursor. This family contains the precursor of the bacterial protein YfaZ (approximately 180 residues long). Many members of this family are hypothetical proteins.	1.42052e-67
NZ_CP050150.1\|WP_166493373.1\|2963514_2964948_+\|catalase	gnl\|CDD\|163712	cd08156, catalase_clade_3, Clade 3 of the heme-binding enzyme catalase. Catalase is a ubiquitous enzyme found in both prokaryotes and eukaryotes, which is involved in the protection of cells from the toxic effects of peroxides. It catalyzes the conversion of hydrogen peroxide to water and molecular oxygen. Catalases also utilize hydrogen peroxide to oxidize various substrates such as alcohol or phenols. Clade 3 catalases are the most abundant subfamily and are found in all three kingdoms of life; they have a relatively small subunit size of 43 to 75 kDa, and bind a protoheme IX (heme b) group buried deep inside the structure. Clade 3 catalases also bind NADPH as a second redox-active cofactor. They form tetramers, and in eukaryotic cells, catalases are located in peroxisomes.	0
NZ_CP050150.1\|WP_025797991.1\|2960080_2961292_+\|tyrosine-transporter-TyrP	gnl\|CDD\|185086	PRK15132, PRK15132, tyrosine transporter TyrP; Provisional.	0
NZ_CP050150.1\|WP_166493367.1\|2945827_2946826_-\|type-I-F-CRISPR-associated-protein-Csy3	gnl\|CDD\|378222	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2463 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy3, for CRISPR/Cas Subtype Ypest protein 3.	0
NZ_CP050150.1\|WP_166493365.1\|2943096_2944182_+\|acyltransferase	gnl\|CDD\|224748	COG1835, COG1835, Predicted acyltransferases [Lipid metabolism].	2.77923e-11
NZ_CP050150.1\|WP_025798000.1\|2955540_2955783_-\|molybdopterin-synthase-sulfur-carrier-subunit	gnl\|CDD\|182985	PRK11130, moaD, molybdopterin synthase small subunit; Provisional.	2.45972e-47
NZ_CP050150.1\|WP_166493363.1\|2941707_2942286_-\|flavodoxin-family-protein	gnl\|CDD\|223728	COG0655, WrbA, Multimeric flavodoxin WrbA [General function prediction only].	4.93375e-33
NZ_CP050150.1\|WP_025797995.1\|2956298_2957285_-\|GTP-3',8-cyclase-MoaA	gnl\|CDD\|234672	PRK00164, moaA, GTP 3',8-cyclase MoaA.	0
NZ_CP050150.1\|WP_096388043.1\|2961472_2962498_+\|tryptophan--tRNA-ligase	gnl\|CDD\|183400	PRK12282, PRK12282, tryptophanyl-tRNA synthetase II; Reviewed.	0
NZ_CP050150.1\|WP_046449890.1\|2945260_2945815_-\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	gnl\|CDD\|378224	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This protein family, typified by YPO2462 of Yersinia pestis, is a CRISPR-associated (Cas) family strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy4, for CRISPR/Cas Subtype Ypest protein 4.	6.3415e-96
NZ_CP050150.1\|WP_025798003.1\|2955085_2955538_-\|molybdopterin-synthase-catalytic-subunit-MoaE	gnl\|CDD\|182642	PRK10678, moaE, molybdopterin synthase catalytic subunit MoaE.	3.26556e-115
NZ_CP050150.1\|WP_166493372.1\|2958678_2959872_-\|nicotinamide-mononucleotide-deamidase-related-protein-YfaY	gnl\|CDD\|179629	PRK03673, PRK03673, nicotinamide mononucleotide deamidase-related protein YfaY.	0

>NZ_CP050150.1|WP_166493371.1|2952386_2953418_-|type-I-F-CRISPR-associated-endonuclease-Cas1
MCWVVFLHCLQRWNNDVNSNDFSPSDLKTILHSKRSNIYYLQYCRVLVNGGRVEYVTDEGRESLYWNIPIANTTVVMLGTGTSVTQAAMREFARAGVLVGFCGGGGTPLFAANEVEVDVSWLAPQSEYRPTEYLQNWVSFWFDDDKRLAAAVRFQRVRADQIRRHWLGSLMQREERFRVDESRLQALLQRYEQNLEKCANHTDLMVQEAVMTKALYKLASDSTQYGEFTRAKRGGGTDIANRFLDHGNYLAYGLAAVAAWVTGLPHGLAVLHGKTRRGGVVFDIADLIKDALVLPQAFIAAMAGDDEQEFRQRCLTGFQRAEVLDTMIETLQDTAQQLGQSKP
>NZ_CP050150.1|WP_166493370.1|2949111_2952390_-|type-I-F-CRISPR-associated-helicase-Cas3
MNILLISQCSKNALVASRRILDQFAERKGDGTWQTAITLDGLNTLRRLLRKTARRNTAVACHWIKSGGQTELLWIVGNLRRFNAQGAVPTNRTMRDVLKSQDENQWHSAEAISLLAGIAGLFHDFGKANALFQLGLKGKSERGFQPLRHEWISLRLFQAFVGEQNDSDWLSSLAQISSEHEKDMLDRLVCDPKSDSRNVFSYLPPLAQTIAWLIVSHHRLPAYPNHSPNPEKTYQAEPQFPKCEGWLETQFDSLWNSTNQDAVDWRAQDWQQVWSFPHGTPLQSEVWCGKARKFAQRALQSTTLIPHGQLTNRFALHLSRLVLMLADHDYSSRLATIGWQSADYHAWANTDSSTKALKQKLDEHNIGVGQNALLLGRSLPKLRQTLPALTRHKGFKQRTANARFRWQDTAFDIAAALRDRSALQGFFGVNMASTGCGKTFANARIMYALADEKIGCRFSVALGLRTLTLQTGDALRDKLQLQSDDLAVLIGSSSVQQLHQLHRAAPMDDVSSQSAERLFAEHQYVRYDGSLDDGRLSHWLKQDSKLHKLISAPVLVSTIDHLMPATEGVRGGKQIAPMLRLLTSDLVLDEPDDFDIADLPALCRLVNWAGMLGSRVLLSSATLPPALIQALFRAYEAGRGEYQKSCGIPNAPVNICCAWFDENTTVSEDISDGLRFKDVHEAFAAQRISKLKQATPLRHAALIPLELPTRKINDVLLNLVGALQSSMMQLHCDHHQVHESGKTVSVGLIRMANIDPLVATAQRLFSLKSQNDYRIHYCVYHSQHPLAMRSHIEQRLDAMLTRHRPESLWEIAEVRAAIEQHPESHHLFVVLGTSVTEVGRDWDLDWAIAEPSSMRSLIQLAGRIQRHRQTPPKTPNLHILSKNIKSLRQSRNDSVTYCRPGFESKDYLLASHDLRELLTEEQYLHIDASARILERTDAQVRSPFSNLVDLEHRRLTVELLGARSCAAQWWRSHVDWCGEPQRQMPFRKTGKQLECVLLLDDDDLLRLYNRDTGSAGWKESGEFDYLVLEKAHGVSAWIQVSYSEVYSHLADEFGMEVDEVGQKFGEIGLSMYSEEPEAWRFNPVLGVFRKFE
>NZ_CP050150.1|WP_166493369.1|2947800_2949087_-|type-I-F-CRISPR-associated-protein-Csy1
MGGVKLDGLSKRIAEYIDKKGNLDKHNSLTEIEKMCFYRTWLTKKSNESFNAKQFMTITHAAKYTHGDSKSSSVFLAPTKFVKHEYYLSTSSISCPEADFDGGANFMGIAGLLKLEVGGVSLLSAIERSDYSSLQYFAENDQQLSEWVSGFKRIFDLRQPSSHQLAKQIYFPIGNDQYHLISPLFPSSFAHALHERIVAARFSDETKAANQARKEGLWHETPLVYYPNTAVMNIGGTKPQNISYLNSVRGGRVWLLPCSPPQFKRIEKRPIHIKNIFQRHGPFHPLAQNSSYQLKQYLLSVQDVANTVDIRNRRKELVDDIIVQLFAVVEGIQREEWQGWTSHQECELKRAQQLWLDPYRCRDDEEFKFEREGGDWKKEVADDFALWLNLQLRAEALNMGITERIEWRTEPLFKKYIREFEWSLAEKL
>NZ_CP050150.1|WP_166493368.1|2946850_2947801_-|type-I-F-CRISPR-associated-protein-Csy2
MSYLIVLRRVRVENANCVAGLTYGFPAITHFLGYTHALSRRLQITHGLSLDGCAVISHHFQHHMHSSGWDNQFALTRNPLTKEAKTAAFNEEGRMHMTVSLLIECHGSIPNGDEGLQALAQHLQTQCQTLRLAGGIITKIDKVDVMAYPLSADALRRLICQHLPSFALQDRSVLLGEHLADLRTSRPEAQMLDAWLDFAALKRAAVKEPESGTVDWRYLMKPAKGYLVPLLTGYLRISPLYEPGEVNNTRDAETPFCFAEAVYGVGEWRGLHHFHDLSALLWRYHVTEQGYYCCGSQTATLIQPDESADEIEEIIY
>NZ_CP050150.1|WP_166493367.1|2945827_2946826_-|type-I-F-CRISPR-associated-protein-Csy3
MAIKTASVLAFERKLANSDALMFAGKWSDVSNVATTWQPLHIQEKAVRGTISNRLKNAIASDRTKLDAEIQKANLQRVDVAALPMDADTLKVTFTLRVLGNLSTPSVCNDQEYQAALQEVIEGYIAEHGFTELAARYAENLANGRFLWRNRIGAEAIEVHVSSGEQHWKFDAQNYSLREFSQPKGDLKALAQVIEAGLRGESFALLTVNAFVHLGAGQEIFPSQELVLDSNSKKSKVLYQVSDVAAMHSQKVGNALRTIDTWHPMVESLGAIAVEPYGSVTSRGVACRQPKEKMDFYTLLDKWVTKGEKPATEQQHYVMAVLIRGGVFGEKE
>NZ_CP050150.1|WP_046449890.1|2945260_2945815_-|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4
MNFYQDIRVLEDPEFKESMLMAALFAKLHRALGAYGEGDIGVSFPRAEKILGDTIRLHGSQQALSAIAATPWLKGLRDYTQCSDILAVPEKVAYRSVSRVQVKSSAERLRRRSVKKGWLTEEQARLQILDVNEQRTSLPFVVLKSLSTGQMFHLFIRQGELQTQPTAGKFSSYGLSATATVPWF
>NZ_CP050150.1|WP_166493366.1|2944181_2945225_+|hypothetical-protein
MNMTPTKKQKPNSLGHEQSLSVSYMKAIGIIVVVIGHYTSGFFNVMLPYLYHMPLFFFIGGITLKKEPISIEAVKKISIKIVPYMITTYLITGLICVLLNIITGMYYGNPFTQNPLSMNFNNNPLFLVCWFLLAYYFSSLITRVLITVTIHLEKQNLILILVGLLIGFLAVNQCAEFYNKEKLQILNLITQSVYGSSFMLLGFSLKKLALSIYNPLISVLLIVFIATLISYGLIKQSAMAWSTYPSGFIMSTIGSLLCIFVVLNISNILSSNNFNLLKQIGDNSKTIMSWHLSVFAIINVIFYYIGSGNIKGVKLDNTYTQYSFPLYTICGVMIPFICLKIKNRLPL
>NZ_CP050150.1|WP_166493365.1|2943096_2944182_+|acyltransferase
MNKITHLEGLRGLCCFIVVFDHCVSAFNSALRHTDISGIIGDVQRVIAWSPLNLIYSGIPSVYIFFILSGFVLSNKFNLHKKNDILISASIKRYPRLMLPIFFAMVVMFIIYKISNSIFGTGYNLSIIDVFMQSFIYVPFGGSKLENGAMWTITYELYGSFLIFATLALFGSYRYKHGIYFILFLFTLESYYCVFIFGMVINSLLHDGYTCKINNKYIALIVIAISLVLISYPYPRSGVSIGGMYSYLSIFKDQNTTYQYLTKLGCITLFVSLFSLDSIKSFFNNRIFQFMGKISFSVYILHVPFLIFTLNFKNEFHSTSIRLVVLTFIVYLLTIITSIYFEKFIDTGAVKYSNKLAKRVA
>NZ_CP050150.1|WP_166493364.1|2942413_2942671_-|hypothetical-protein
MIWFEQGLYLRVEELENGPLPLPLRSGFSREIAYRALGVFNPSESSDAYYILSNDRDEIWFICNRHLRTVALLPDTTDFRRPIVY
>NZ_CP050150.1|WP_166493363.1|2941707_2942286_-|flavodoxin-family-protein
MTALAVVFHSGYGHTAKAAEAVAAGAQQIDGVSVEVLAIDSEGNLPEGGWHLLAQADAIIFGSPTYMGGPSWQFKKFADASSKPWFSQEWKDKVFAGFTNSASMNGDKLGTLDYMFHLSQQHGGVWVGMGMLPSNTKAANRNDVNYIAGFSGLMTVSPSDASPDEAPLPGDLETARKFGERVAHVTKRWSGV
>NZ_CP050150.1|WP_025798003.1|2955085_2955538_-|molybdopterin-synthase-catalytic-subunit-MoaE
MENTRIRVGLDNFSVGDEYQWLSQCEDDGAVVTFTGKVRNHNLGDNVSALTLEHYPGMTEKALNEIVAEARSRWPLQRISLIHRIGAMYPGDEIVFVGVTSAHRSMAFDAAEFIMDYLKTRAPFWKREATEQGDRWVDARDSDQQAAKRW
>NZ_CP050150.1|WP_025798000.1|2955540_2955783_-|molybdopterin-synthase-sulfur-carrier-subunit
MIKVLFFAQVRELIETDELQCELYPTVEALRAALAERGDKWALALETGKLLAAVNQTLVEFTHPLQVGDEVAFFPPVTGG
>NZ_CP050150.1|WP_043494066.1|2955779_2956262_-|cyclic-pyranopterin-monophosphate-synthase-MoaC
MSQLTHINAAGEAHMVDVSAKAETVREARAEAYVEMKPETLAMIVEGKHHKGDVFATARIAGIQAAKRTWELIPLCHPLLLTKVEVQLSAEVDTSRVRIESCCRLTGKTGVEMEALTAASVAALTIYDMCKAVQKDMVIGPVRLLAKSGGKSGDFKADAS
>NZ_CP050150.1|WP_025797995.1|2956298_2957285_-|GTP-3',8-cyclase-MoaA
MLQLTDAFERKFYYLRLSITDVCNFRCTYCLPDGYKPNGHANKSFLSLDEIRRVSRAFAELGTEKVRLTGGEPSLRRDFVDIISAVRENPSIRTLAVTTNGYRMARDIADWRAAGLTAVNVSVDSLDARQFHAITGEDKLKQVMQGIDAAFDAGFEKVKVNTVLMRDVNDRSLNGFLNWIKTRPIQMRFIELMETGDGGNLFRKHHVSGEVIRDQLLALGWQRQERSRSDGPAQVFSHPDYLGEVGLIMPYEKDFCASCNRLRVSAIGNLHLCLFGESGIPLRDLLAGDEHLDELKMRIQGGLRHKKQTHFLHDGNIGHTQNLSFIGG
>NZ_CP050150.1|WP_025797993.1|2957680_2958589_+|uridine-diphosphate-N-acetylglucosamine-binding-protein-YvcK
MRNRALADLDKVVALGGGHGLGRVMSALSPLGSRLTGIVTTTDNGGSTGRIRRSEGGIAWGDMRNCLNQLITEPSVASAMFEYRFNGNGELAGHNLGNLMLKALDHLSVRPLEAINLIRSLLKVDASLIPMSEQPVDLNAIDQDGHVIYGEVNIDQLKEMPAQLMLEPQVQATREAVDAIEKADLILIGPGSFLTSLMPLLLLEDLTRALRRTRAHMIYIGNLGKELSVAAAALTLPDKLRIMEEAIGGHAIDGVVVGPKVNIQGMENRVVVQETLEASDIPYRHDRDLLRMAIEKALQQLS
>NZ_CP050150.1|WP_166493372.1|2958678_2959872_-|nicotinamide-mononucleotide-deamidase-related-protein-YfaY
MLRLEMLCTGDEVLHGQIIDTNSAWLADYLFQQGIPMRARSTVGDALEDLVSTLQLRSQYADVLIVNGGLGPTSDDLSAQAAADALGERLVEHPEWIAQMEAYFASRGRPMSDSNRKQAMIPASAEMIDNPVGTACGFAIQLNGCWIFFTPGVPSEFKVMVEQQILPRLRQRFTLSEPPLCLRLTTFGRSESGLAQQLDSLPLPPNTTLGYRSSMPIIELKLTGPSSQREAMVETWQHVRAVAGENCVFEGTAGLPHDVAVLLRERGLRLAVSEQFTAGLLSWQLRSADAPLGNGELPEHSGNSSLKAVASRARILATHSGVDLTIAIGELQDDCISVVLHSAQDTFGQTMVYSSQRHSQRIRQEMTAMLALDMLRRWLTGQSPYGNYEWLKPTETL
>NZ_CP050150.1|WP_025797991.1|2960080_2961292_+|tyrosine-transporter-TyrP
MKNRTLGSIFIVAGTTIGAGMLAMPLAAAGVGFGTTFIMLVSLWALMCYTALLLVEVYQHESADTGLGTLAKHYLGRSGQWLAGASMLFLMYALTAAYISGAGELLASSLSQWLSLEIKPSVGVLLFTLIAGGVVCIGTHSVDMFNRVLFTAKIVLLVIMLTLMMPHIHQANLLTMPLEKGLALSAIPVIFTSFGFHGSVPSIVSYMNGNLRKLRWVFITGSAIPLIAYIFWQLATLGSISSSTFVGILAAQSGLNGLLQAVREVVATPHVELAVHLFADLALATSFLGVALGLFDYLADLFQRSNKASGRAQTGLMTFLPPLAFALFYPQGFVMALGYAAVALAVLALLIPSMLVWQTRKHHPQAGYRVMGGKPALVLVFLCGLCVIAIQLSIASGLLPAVG
>NZ_CP050150.1|WP_096388043.1|2961472_2962498_+|tryptophan--tRNA-ligase
MSDLQTHSASHTILTGDRPTGQLHLGHYIGSLRQRVALQDLYPQFVLIADLQGLTDNGSNPQKISHNIFEVMADYLAVGIDPAKTTICLQSALPALAELTMLYMNIVSVARVERNPTVKAEIAQKGFSRTLPTGFLVYPISQAADITAFKADRVPVGDDQLPMLEQTNEIVHKMNSLLPEPTLVPCQAMLSAVSRLPGIDGNAKMSKSLGNTLTLGASADDISKAVHAMYTDPNHLRVSDPGQIEGNVVFTYLDAFHPDTAQVAAMKEHYQRGGLGDRQCKQELEACLQALLEPIRERRLQFSADKAALMEILQAGTEKAREVTQQTLAEVKRGLGLPVMF
>NZ_CP050150.1|WP_025797986.1|2962580_2963126_-|porin
MKKIVLGCACAALFSATAANAISIHGQAGEHYTNVEAGFGTDSSGLYSTLNWAHNDDDGDVAGLGLGINLPLGPFLANVGGKALYLNPQKDGSDGYAIAVGGGLQWPLTKSFSLYGEGYYSPDSLSSGINDYKEASAGLRWSVIRPVTIDVGYRYIEMSGKDGDRNNVVADGAYVGAGIGF
>NZ_CP050150.1|WP_166493373.1|2963514_2964948_+|catalase
MSKKGLTTAAGAPVVDNNNVITAGPRGPMLLQDVWFLEKLAHFDREVIPERRMHAKGSGAHGTFTVTHDISKYTRAKIFSEIGKQTPMMVRFSTVAGERGAADAERDIRGFAMKFYTEEGNWDLVGNDTPVFYLRDPLKFPDLNHVVKRDPRTNLRNPVYKWDFFSQLPEAFHQLTIDFSDRGLPKSYRHMHGFGSHTFSFINADNERFWVKFHFRCQQGIENLMDDEAEALVGKDRESSQRDLYDAIERKDFPRWNLQVQIMPEKEAAQTPYNPFDLTKVWPHKDYPLIDVGYFELNRNPDNYFAEVEQVAMNPANVVPGISFSPDKMLQGRLFSYGDAHRYRLGVNHHQIPVNAPQCPFHNYHRDGAMRVDGNSGNGATYEPNTFGVFQEQPDFSEPPLSIEGAADHWNHREDTDYYTQPRALFNLLSEEEHQRMYTRIAGELSQVPEAIQKRALCHFAQIHPDYAAGIMKALGQ

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Crispr_ID: NZ_CP050150_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050150_4

3033996-3034142

Orphan

Consensus_repeat	Method
CGGACGCCTGCACGGTTTAAATGTGGAGCTCAATGTTTTAGGCGGACGTAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP050150_4

>merge|NZ_CP050150|4|3033996-3034142|CRISPRCasFinder
CGGACGCCTGCACGGTTTAAATGTGGAGCTCAATGTTTTAGGCGGACGTAACCTTTCACCACACTTAAGCTATAAAGGCGATTGAGCCGCCTTGCTCGGACGCCTGCACGGTTTAAATGTGGAGCTCAGTGTTTTAGGCGGACGTAA

>NZ_CP050150|4|4|3033996-3034142|CRISPRCasFinder
CGGACGCCTGCACGGTTTAAATGTGGAGCTCAATGTTTTAGGCGGACGTAA	CCTTTCACCACACTTAAGCTATAAAGGCGATTGAGCCGCCTTGCT
CGGACGCCTGCACGGTTTAAATGTGGAGCTCAGTGTTTTAGGCGGACGTAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050150.1\|WP_025797874.1\|3036852_3037347_-\|YfbU-family-protein	unknown	unknown	gnl\|CDD\|180087
NZ_CP050150.1\|WP_043494148.1\|3028564_3029875_+\|thiosulfate-sulfurtransferase	unknown	unknown	gnl\|CDD\|225450
NZ_CP050150.1\|WP_025797890.1\|3025294_3025735_-\|NADH-quinone-oxidoreductase-subunit-A	unknown	unknown	gnl\|CDD\|180638
NZ_CP050150.1\|WP_038502366.1\|3026409_3027360_-\|transcriptional-regulator-LrhA	unknown	unknown	gnl\|CDD\|237907
NZ_CP050150.1\|WP_025797857.1\|3045289_3045559_-\|PTS-sugar-transporter-subunit-IIB	unknown	unknown	gnl\|CDD\|99905
NZ_CP050150.1\|WP_025797871.1\|3037602_3038058_-\|DUF412-domain-containing-protein	unknown	unknown	gnl\|CDD\|179338
NZ_CP050150.1\|WP_072053382.1\|3039817_3041971_+\|phosphate-acetyltransferase	unknown	unknown	gnl\|CDD\|235537
NZ_CP050150.1\|WP_166493386.1\|3030543_3031134_-\|carboxymuconolactone-decarboxylase-family-protein	unknown	unknown	gnl\|CDD\|225039
NZ_CP050150.1\|WP_025797893.1\|3022644_3024441_-\|NADH-quinone-oxidoreductase-subunit-C/D	unknown	unknown	gnl\|CDD\|236965
NZ_CP050150.1\|WP_166493387.1\|3042052_3043027_-\|transketolase-family-protein	unknown	unknown	gnl\|CDD\|226467
NZ_CP050150.1\|WP_043494145.1\|3027724_3028408_-\|TVP38/TMEM64-family-protein	unknown	unknown	gnl\|CDD\|223475
NZ_CP050150.1\|WP_025797878.1\|3034194_3036027_-\|SLC13-family-permease	unknown	unknown	gnl\|CDD\|223547
NZ_CP050150.1\|WP_166493388.1\|3043023_3043854_-\|transketolase	unknown	unknown	gnl\|CDD\|238970
NZ_CP050150.1\|WP_043494152.1\|3031433_3032654_+\|pyridoxal-phosphate-dependent-aminotransferase	unknown	unknown	gnl\|CDD\|181738
NZ_CP050150.1\|WP_025797869.1\|3038462_3039662_+\|acetate-kinase	unknown	unknown	gnl\|CDD\|234680
NZ_CP050150.1\|WP_096388087.1\|3029930_3030551_-\|CDP-alcohol-phosphatidyltransferase-family-protein	unknown	unknown	gnl\|CDD\|223632
NZ_CP050150.1\|WP_043494179.1\|3043863_3045249_-\|PTS-ascorbate-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|171824
NZ_CP050150.1\|WP_025797891.1\|3024571_3025246_-\|NADH-quinone-oxidoreductase-subunit-B	unknown	unknown	gnl\|CDD\|223454
NZ_CP050150.1\|WP_040046426.1\|3032768_3033374_+\|5'-deoxynucleotidase	unknown	unknown	gnl\|CDD\|235165
NZ_CP050150.1\|WP_040046443.1\|3036183_3036837_-\|sugar-phosphatase	unknown	unknown	gnl\|CDD\|183215

Protein	Function_ID	Function_description	E-value
NZ_CP050150.1\|WP_025797874.1\|3036852_3037347_-\|YfbU-family-protein	gnl\|CDD\|180087	PRK05445, PRK05445, YfbU family protein.	1.37391e-110
NZ_CP050150.1\|WP_043494148.1\|3028564_3029875_+\|thiosulfate-sulfurtransferase	gnl\|CDD\|225450	COG2897, SseA, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism].	2.8595e-73
NZ_CP050150.1\|WP_025797890.1\|3025294_3025735_-\|NADH-quinone-oxidoreductase-subunit-A	gnl\|CDD\|180638	PRK06602, PRK06602, NADH:ubiquinone oxidoreductase subunit A; Validated.	3.86763e-64
NZ_CP050150.1\|WP_038502366.1\|3026409_3027360_-\|transcriptional-regulator-LrhA	gnl\|CDD\|237907	PRK15092, PRK15092, DNA-binding transcriptional repressor LrhA; Provisional.	0
NZ_CP050150.1\|WP_025797857.1\|3045289_3045559_-\|PTS-sugar-transporter-subunit-IIB	gnl\|CDD\|99905	cd05563, PTS_IIB_ascorbate, PTS_IIB_ascorbate: subunit IIB of enzyme II (EII) of the L-ascorbate-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In this system, EII is an L-ascorbate-specific permease with two cytoplasmic subunits (IIA and IIB) and a transmembrane channel IIC subunit. Subunits IIA, IIB, and IIC are encoded by the sgaA, sgaB, and sgaT genes of the E. coli sgaTBA operon. In some bacteria, the IIB (SgaB) domain is fused C-terminal to the IIA (SgaT) domain. The IIB domain fold includes a central four-stranded parallel open twisted beta-sheet flanked by alpha-helices on both sides. The seven major PTS systems with this IIB fold include ascorbate, chitobiose/lichenan, lactose, galactitol, mannitol, fructose, and a sensory system with similarity to the bacterial bgl system.	3.16396e-34
NZ_CP050150.1\|WP_025797871.1\|3037602_3038058_-\|DUF412-domain-containing-protein	gnl\|CDD\|179338	PRK01816, PRK01816, hypothetical protein; Provisional.	5.93528e-96
NZ_CP050150.1\|WP_072053382.1\|3039817_3041971_+\|phosphate-acetyltransferase	gnl\|CDD\|235537	PRK05632, PRK05632, phosphate acetyltransferase; Reviewed.	0
NZ_CP050150.1\|WP_166493386.1\|3030543_3031134_-\|carboxymuconolactone-decarboxylase-family-protein	gnl\|CDD\|225039	COG2128, COG2128, Uncharacterized conserved protein [Function unknown].	1.68014e-26
NZ_CP050150.1\|WP_025797893.1\|3022644_3024441_-\|NADH-quinone-oxidoreductase-subunit-C/D	gnl\|CDD\|236965	PRK11742, PRK11742, bifunctional NADH:ubiquinone oxidoreductase subunit C/D; Provisional.	0
NZ_CP050150.1\|WP_166493387.1\|3042052_3043027_-\|transketolase-family-protein	gnl\|CDD\|226467	COG3958, COG3958, Transketolase, C-terminal subunit [Carbohydrate transport and metabolism].	2.97498e-147
NZ_CP050150.1\|WP_043494145.1\|3027724_3028408_-\|TVP38/TMEM64-family-protein	gnl\|CDD\|223475	COG0398, COG0398, Uncharacterized conserved protein [Function unknown].	5.54374e-34
NZ_CP050150.1\|WP_025797878.1\|3034194_3036027_-\|SLC13-family-permease	gnl\|CDD\|223547	COG0471, CitT, Di- and tricarboxylate transporters [Inorganic ion transport and metabolism].	2.5239e-70
NZ_CP050150.1\|WP_166493388.1\|3043023_3043854_-\|transketolase	gnl\|CDD\|238970	cd02012, TPP_TK, Thiamine pyrophosphate (TPP) family, Transketolase (TK) subfamily, TPP-binding module; TK catalyzes the transfer of a two-carbon unit from ketose phosphates to aldose phosphates. In heterotrophic organisms, TK provides a link between glycolysis and the pentose phosphate pathway and provides precursors for nucleotide, aromatic amino acid and vitamin biosynthesis. In addition, the enzyme plays a central role in the Calvin cycle in plants. Typically, TKs are homodimers. They require TPP and divalent cations, such as magnesium ions, for activity.	1.63509e-125
NZ_CP050150.1\|WP_043494152.1\|3031433_3032654_+\|pyridoxal-phosphate-dependent-aminotransferase	gnl\|CDD\|181738	PRK09265, PRK09265, aminotransferase AlaT; Validated.	0
NZ_CP050150.1\|WP_025797869.1\|3038462_3039662_+\|acetate-kinase	gnl\|CDD\|234680	PRK00180, PRK00180, acetate kinase A/propionate kinase 2; Reviewed.	0
NZ_CP050150.1\|WP_096388087.1\|3029930_3030551_-\|CDP-alcohol-phosphatidyltransferase-family-protein	gnl\|CDD\|223632	COG0558, PgsA, Phosphatidylglycerophosphate synthase [Lipid metabolism].	4.952e-14
NZ_CP050150.1\|WP_043494179.1\|3043863_3045249_-\|PTS-ascorbate-transporter-subunit-IIC	gnl\|CDD\|171824	PRK12996, ulaA, PTS ascorbate transporter subunit IIC.	0
NZ_CP050150.1\|WP_025797891.1\|3024571_3025246_-\|NADH-quinone-oxidoreductase-subunit-B	gnl\|CDD\|223454	COG0377, NuoB, NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases [Energy production and conversion].	1.65302e-106
NZ_CP050150.1\|WP_040046426.1\|3032768_3033374_+\|5'-deoxynucleotidase	gnl\|CDD\|235165	PRK03826, PRK03826, 5'-nucleotidase; Provisional.	3.13961e-139
NZ_CP050150.1\|WP_040046443.1\|3036183_3036837_-\|sugar-phosphatase	gnl\|CDD\|183215	PRK11587, PRK11587, putative phosphatase; Provisional.	7.5302e-151

>NZ_CP050150.1|WP_040046426.1|3032768_3033374_+|5'-deoxynucleotidase
MSQNQSHFFAHLSRLKLISRWPLMRNVRTENVSEHSLQVAFVAHALAIIKNRKFNGNVNPERVALLAMYHDASEVLTGDMPTPIKYYNPQIAHEYKKIEKVAQQKLIEMLPPELQNDFRPLLDEHYYTEDEKLVVKQADALCAYLKCLEELSAGNNEFKLAKARLEKTLDMRSSPEMEYFMEVFIPSFSLSLDEISQDEVM
>NZ_CP050150.1|WP_043494152.1|3031433_3032654_+|pyridoxal-phosphate-dependent-aminotransferase
MSPIEKSRKLDHVCYDIRGPVLKEAKRLEEEGNKVLKLNIGNPAPFGFEAPDEILVDVIRNLPTAQGYCDSKGLYSARKAIMQHYQARDIHDVTVEDIYIGNGVSELIVQSMQALLNSDDEMLVPAPDYPLWTAAVSLSGGNAVHYRCDEEADWFPDLDDIRSKITPRTRGIVIINPNNPTGAVYSKALLEEIVTIARENNLIIFADEIYDKILYDDAEHISIASLAPDLLVVTFNGLSKTYRVAGFRQGWMVLSGPKKHAKGYIEGLEMLASMRLCANVPMQHAIQTAIGGYQSINEFIQPGGRLYEQRNRAWELINEIPGVSCVKPRGALYMFPKIDAKRFNVHDDQKMVLDLLLQEKVLLVQGTAFNWPEPDHFRIVTLPRVDDLDMAIHKLGRFFSGYHQKY
>NZ_CP050150.1|WP_166493386.1|3030543_3031134_-|carboxymuconolactone-decarboxylase-family-protein
MKNNDNQPWISPLKKIPTVLTPIVRAQEKHYGQILNPTRWWGRFPFLFWLVAFFVGFLERRGSGITPTVRALVMTRVSQQCDCAFCIDANSLRLAERSGSLDKVMSVQNWQAADCFDEQERAALAYADGMTATPPRIDDSLKTELKSHFNEKAITELTALIAFQNLSARFNAALDISSQGLCVPETAVKRKGAPRV
>NZ_CP050150.1|WP_096388087.1|3029930_3030551_-|CDP-alcohol-phosphatidyltransferase-family-protein
MFDRYLHPRVKPLLNQMVAHLDRPAITPDRISLGGFVVGVLALPFLAMQWYYAALIVIVINRLCDGLDGALARRRGLSDAGGFLDIALDFLFYALVPFGFVLASPELNAVAGAWLLFAFIGTGSSFLAFAAVADKYRLENLDYPHKSFYYLGGLTEGAETILVFILFCLFPAYFPLIAWLFGGLCWFTTLTRVWGGYNTLKRVEKI
>NZ_CP050150.1|WP_043494148.1|3028564_3029875_+|thiosulfate-sulfurtransferase
MKFSFQLATSALLLGWLQVANAAAIPMTQTTLADVQSQKGAVIDTRPSAFYNGWPQGVDGASGHEPQAVNLSAGWLSEMNDQQLQQWATQHQITSDRKVALYGTAAQTSAVQERLAKLGYANITLLSDALAQPKRLQRMSHFEQLVYPQWIYDLQQGKAVAAKPAGEWKVIEAAWGAPKKYLISHIPNAGYIDTNDVESEPLWNKVSDDKLKALMAKQGIKHDTTVILYGRDVYAAARVAQILLYAGVKDVRLLDGGWQTWSAAGLPVERGLPKEAKPAPDFGAAIPGQPQIMLNEEQARGLLHRKDASLVSIRSWPEFTGETSGYSYIKPKGEIAGARWGHAGSDSTHMEDFHNPDGTMRSADDIAAMWKEWHITPDQHVSFYCGTGWRASETFMYARAMGWPSVSVYDGGWYEWSANPKNPVVTGERGPDSSWK
>NZ_CP050150.1|WP_043494145.1|3027724_3028408_-|TVP38/TMEM64-family-protein
MFKRRQRNIVILLCLIGGAMMWFEPVRHQLKALWGLFSSLDVNVMMEYLRSFGPWAMAVSFLLMIFQAVAAPLPAFLITFANAALFGWWQGALLSWCSSMVAAWLCFVLARWLGRDTIEKFVSEKALDSSDRFFERYGKHTILICRLLPFISFDIISYAAGLTSIKVSVFLIATGIGQLPATLVYSYVGGMLTGGLRWFITGLLIMFSLSILIFALKNKKHSRGNNS
>NZ_CP050150.1|WP_038502366.1|3026409_3027360_-|transcriptional-regulator-LrhA
MINTHRPTINLDLDLLRTFVAVADVKTFAAAAIVVQRTQSAVSQQMQRLEQLVGKELFARHGRNKQLTEHGVQLLGYARKILRFNDEACSSLIYNHLQGSLIIGATDDTADSILPFLLSRFTSLYPKLEIDVRVKRSPDMRQLLKDREIDLAVTTMGFDEFSYETLRRSPTVWFCATDYDFQPSEPVPLVVLDEPSPFRALAIKHLNEAGIPWRIAYVASTLSAVRAAVKAGLGVTARPIEMMSPELRVLGLSERLPKLPETEYALCLAPNCTNELATILFSSLKAGSDPYIEGGPGVTVQTVQEGSFSSGPEDVA
>NZ_CP050150.1|WP_025797890.1|3025294_3025735_-|NADH-quinone-oxidoreductase-subunit-A
MSTATEVIAHHWAFAVFIIIALGLCGVMLLGAYALGGRARARSKNTPYESGIDSVGSARLRLSAKFYLVAMFFVIFDVEALYLYAWSVSIRESGWIGFIEAAIFILVLLAGLFYLVRIGALDWTPARSKRRVEHESTVTNTDSRPQ
>NZ_CP050150.1|WP_025797891.1|3024571_3025246_-|NADH-quinone-oxidoreductase-subunit-B
MDYTLTRIDPDGENDRYPLQKQEIVSDPLEQHVHRSVYMGKLENALHDMVNWGRKNSLWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADFMVVAGTCFTKMAPVIQRLYDQMLEPKWVISMGSCANSGGMYDIYSVVQGVDKFIPVDVYIPGCPPRPEAYMQALMLLQESIGKERRPLSWVVGDQGVYRANMPSEKERKRAERIAVTNLRSPDEI
>NZ_CP050150.1|WP_025797893.1|3022644_3024441_-|NADH-quinone-oxidoreductase-subunit-C/D
MTDSTTQDLNLPAWQTRDHLDDPVIGELRNRFGPDAFTVQPTRTGMPVVWVKREQLLEVMTFLKKLPKPYVMLFDLHGMDERLRTHRQGLPEADFSVFYHIISIERNRDIMLKVALSEKDMHLPTVTKIFPNANWYERETWEMFGMTFDGHPHLTRIMMPQSWEGHPLRKDYPARATEFDPFELTKQKQDLEMESLTFKPEDWGMKRSTENEDFMFLNLGPNHPSSHGAFRIVLQLDGEEIVDCVPDVGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGIEVPERVKVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKVYDVVEAITGFRMHPAWFRIGGVAHDLPRGWERLLRDFLDWMPKRLDSYVKAALKNTILKGRSVGVAAYNSKEALDWGVTGAGLRATGIEFDVRKWRPYSGYENFDFEVPVGHNGDCYDRVMLKVEELRQSLRILEQCYKNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMVEATKGINSYYLTSDGSTMSYRTRIRTPSYAHLQQIPAVIRGSLVSDLIVYLGSIDFVMSDVDR
>NZ_CP050150.1|WP_025797878.1|3034194_3036027_-|SLC13-family-permease
MNGELLWVLTLLLIAIVLFATNKLRMDVVALLIIIAFVLSGTLSLSEATAGFSDPNVILIAALFVIGDGLVRTGVAYQVGDWLVKVAGDSEAKMLVLLMITVAALGAVMSSTGVVAIFIPVVLSVAARMKISPARLLMPLSFAGLISGMMTLVATPPNMIVSSELVREGFHGLSFFSVTPVGIIVLLMGVGYMLVARNWLASGKDDNDKDSWKRRTFRDLIRDYKLTGRARRLALRSGSPLIGHTLDELHLRSRYGANVVGIERWRKFRRVMVSAIGNTELKDRDVLLIDMSDSEVDLREFCAEQMLEPMVLRGEYFSEQARDVGMAEVTIVPDSDLIGKTLREMTFRTRYGLNVVGIRRDGVPMEGKLVNEPLQLGDILLVIGNWKQIRQLQLQPRDFIVLHLPAEVDDVAPAISQAPHALFCLALMIAMMLTDEVPNAIAALIACMLMGKFRCIDMESAYKSIHWPSLILIVGMLPFALALQKTGGITLAVDVLMDLVGGMGPRIVLLSLFVFCAVTGLFISNTATAVLMAPIAIATAHAMHLSPYPFAMIVAISASAAFMTPVSSPVNTLVMGPGNYSFGDFVKIGVPFTILVMIASVIVVPWLFPF
>NZ_CP050150.1|WP_040046443.1|3036183_3036837_-|sugar-phosphatase
MKCKGFLFDLDGTLVDSLPVVERSWINWAKRQGVDPQEVLDFIHGKQAITSLRHFMSGESEDRIQQEYDWLEEIESRDTDGVTALPGAKALLDRLDELNIPWAIVTSGSIPVAYARRAAGQLPKPDVFITAEQVARGKPEPDAYLLGAQKLGLAVSDCVVVEDAAAGILSGLSAGCQVIAVNAPQDAPKLDLVDLNLTSLTQIRIEKEGDYAVIHAL
>NZ_CP050150.1|WP_025797874.1|3036852_3037347_-|YfbU-family-protein
MEMTNAQRLILSNQYKMMTMMDPDNAERYRRLQTIIERGFGLQMRELDRDFGELSEDTCRTIINIMEMHHALQVSFNNLKEKQDLDPRRLEFLGFDAATESRYLSYVRFMVGTEGRYTHFDSGTHGFNAQTKMWDKYQRMLSIWQSCPRQYHLSAVEIAQIINA
>NZ_CP050150.1|WP_025797871.1|3037602_3038058_-|DUF412-domain-containing-protein
MTSKPTGHVGWFQIFQRGQTYMKTWPSDKRLAPMFPENRIAKVTRFAVRFMPPIAIFTLTWQIALGGQLGPAIATALFACSLPMQGLWWLGKRSVTPLPPTLLQWFHEIRAKLVEAGKAQAPVEGTPTYQSLADVLQRAFKQLDKTFLDDI
>NZ_CP050150.1|WP_025797869.1|3038462_3039662_+|acetate-kinase
MSKLVLVLNCGSSSLKFAIINAANGEEHLSGLAECFSLPEARIKWKMDGAKHEEALGAGAAHSEALNFIVNTILAQKPELSASLTAIGHRIVHGGEKFTESALITDEVLQGIKDAIPFAPLHNPAHLIGIAEAFKSFPNLKDKNVAVFDTAFHTTMPEESYLYALPYSLYKDHGVRRYGAHGTSHFFVSQEAAKMLNKPVEELNVITCHLGNGGSVTAVRNGKCVDTSMGLTPLEGLVMGTRSGDIDPAIIFHLHDSLGMSVEQINKLLTKESGLLGLTEVTSDCRYVEDNYETKADAKRAMDVFCHRLAKYIGAYTALMDGRLDAVVFTGGIGENAAMVRELTLDKLGLLGFEIDHERNLAARFGKSGTITKDGSRLAVVIPTNEELVIAQDASRLTA
>NZ_CP050150.1|WP_072053382.1|3039817_3041971_+|phosphate-acetyltransferase
MSRTIMLIPTSTSVGLTSVSLGVIRSMEQKGVRLSVFKPIAQPRTGGDSLDQTTTIIRANSSIPAAEPLRMSYVETLLSSNQQDVLMEEIVARYHENTKDAEVVLVEGLVPTRKHQFANALNYEIAKTLNAEIVFVMALGNDSASQVKERIELARSSFGGSKNKNITGVIINKLNAPVDDQGRTRPDLSEIFDDSNKASIANLDTAQLIENSPLPVLGCVPWSFELIATRAIDMANHLKARVVNEGDIKTRRIKSVTFCARSIPHMLEHFRPGSLLVTSADRPDVLVAACLAAMNGVEIGAILLTGGYDMDERIAKLCERAFQTGLPVFMVDTNTWQTSLSLQSFNLEVPADDHQRVEKLQNYVASHIDSKWIDSLSAASERSRRLSPPAFRYELTELARKACKRVVLPEGDEPRTVKAAAICAERGIAECVLLGNPEEIQRVAAAQGVVLGKGIEIVDPNVVREQYVPRLVELRKSKGMTEVVAREQLEDNVVLGTLMLEQNQVDGLVSGAVHTTANTIRPPLQLIKTAPGSSLVSSVFFMLLPDQVLVYGDCAINPDPTAEQLSEIAIQSADSAAAFGIEPRVAMISYSTGNSGAGSDVEKVREATRLAQEKRPDLIIDGPLQYDAAIMADVAKSKAPNSPVAGKATVFIFPDLNTGNTTYKAVQRSADLVSIGPMLQGMRKPVNDLSRGALVDDIVYTVALTAIQAAQAAAAAK
>NZ_CP050150.1|WP_166493387.1|3042052_3043027_-|transketolase-family-protein
MSHEFLPLQKDKMEMRKVYAQAMRDQFIANTPVIALEADLMSSMAMDSVHRDFPQQVINCGIMEANVIGTAAGLSLAGRIPFVHTFTAFASRRCFDQLFMSVDYQKNNVKVIASDAGVSACHNGGTHMSFEDMGIVRGLAHSVVMEMTDATMFQNILHQLVDLKGFHWVRTIRKQAYTIYPSGTEFTIGKGKVLQDGKDITLIANGIMVAEALQAAQMLTEQGYSAAVIDMFTLKPIDKDLIIEYAAKTGRIVTCENHSIHNGLGSAVAEVLVENHPVPMRRVGVKERYGQVGTQDFLMQEYELTAEDIVKQAMGLLEDNPIKR
>NZ_CP050150.1|WP_166493388.1|3043023_3043854_-|transketolase
MLNLKEVQRYATEIRVETLKALTNLGFGHYGGSMSVVETLAVLYGAVMKVDPAQPQWPERDNFVLSKGHAGPALYSALALKGYFPREALATLNENGTHFPSHPDRLLTHGVDATTGSLGQGVSIATGMALAHHLAGRKNRVFCILGDGELNEGQCWEAFQFIAHHNLNNLTLFIDYNKQQLDGTLDEVIKPFDLNAKFSAFGFDVLSVKGDDIAAIYEAIAPVRSGEQRPRVVLLDSIKGQGVPYIEQLPNSHHLRLTDDIKAEMQKAIATLEATL
>NZ_CP050150.1|WP_043494179.1|3043863_3045249_-|PTS-ascorbate-transporter-subunit-IIC
MFIQETLKFIVDILKVPAVLVGIIALVGLLAQKKSFSDVVKGTVKTILGFIVLGGGAGVLVSSLNPLGGMFEHAFNIQGIIPNNEAIVSIALEKYGAATALIMAFGMVANIVVARFTKLKYIFLTGHHTFYMACMIGIILTVAGFEGVQLVFTGALTLGLVMAFFPALAQRYMRKITGNDDIAFGHFGTLGYILSGWIGGRVGKGSRSTEEMNLPKNLSFLRDSSISISLTMMVIYLIMAVSAGSDFVEATYSAGQNYLVYSIIMAITFAAGVFIILQGVRLILAEIVPAFTGFSERLVPNARPALDCPVVYPYAPNAVLIGFLFSFLGGLVGLFLLGQFNLVLILPGVVPHFFTGATAGVFGNATGGRRGAMIGAFANGLLITFLPVLLLPVLGALGFANTTFSDADFGGIGIVLGNMARFMNKDMIMAVIIAIFVALVAHNYFFSRKISPSTSADSANK
>NZ_CP050150.1|WP_025797857.1|3045289_3045559_-|PTS-sugar-transporter-subunit-IIB
MKIMAICGSGLGSSFMVEMNIKKVLKKMGVEADVEHSDLSSAIPSEADLFVMAKDIAASASIPDNQLIVITNIIDINELETKLRAYFNK

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Crispr_ID: NZ_CP050150_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050150_5

4179384-4179490

Orphan

Consensus_repeat	Method
GGGAGGGAACCGTTCAGCGTTGATCGAAAGATTCTCGAGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP050150_5

>merge|NZ_CP050150|5|4179384-4179490|CRISPRCasFinder
GGGAGGGAACCGTTCAGCGTTGATCGAAAGATTCTCGAGCAACTCCTCCCCCTGCGAAGGGGAGGCTGGGAGGGAACCGTTCAGCGTTGATTGAAAGATTCTCGAGC

>NZ_CP050150|5|5|4179384-4179490|CRISPRCasFinder
GGGAGGGAACCGTTCAGCGTTGATCGAAAGATTCTCGAGC	AACTCCTCCCCCTGCGAAGGGGAGGCT
GGGAGGGAACCGTTCAGCGTTGATTGAAAGATTCTCGAGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050150.1\|WP_025798518.1\|4189768_4191097_-\|putative-aminohydrolase-SsnA	unknown	unknown	gnl\|CDD\|132357
NZ_CP050150.1\|WP_043488909.1\|4176716_4177052_+\|DUF2002-family-protein	unknown	unknown	gnl\|CDD\|370464
NZ_CP050150.1\|WP_166493699.1\|4188923_4189703_-\|molybdopterin-dependent-oxidoreductase-FAD-binding-subunit	unknown	unknown	gnl\|CDD\|182083
NZ_CP050150.1\|WP_025798490.1\|4170618_4171050_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050150.1\|WP_166493694.1\|4174300_4175032_-\|MurR/RpiR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224651
NZ_CP050150.1\|WP_166493852.1\|4195242_4196055_+\|putative-selenium-dependent-hydroxylase-accessory-protein-YqeC	unknown	unknown	gnl\|CDD\|274467
NZ_CP050150.1\|WP_025798493.1\|4172603_4174121_-\|PTS-transporter-subunit-EIIC	unknown	unknown	gnl\|CDD\|273919
NZ_CP050150.1\|WP_043488882.1\|4191099_4194186_-\|putative-selenate-reductase-subunit-YgfK	unknown	unknown	gnl\|CDD\|236630
NZ_CP050150.1\|WP_046448917.1\|4179563_4181213_-\|Na+/H+-antiporter	unknown	unknown	gnl\|CDD\|129911
NZ_CP050150.1\|WP_166493695.1\|4175177_4176491_-\|bifunctional-glucose-1-phosphatase/inositol-phosphatase	unknown	unknown	gnl\|CDD\|182284
NZ_CP050150.1\|WP_096388587.1\|4194575_4195211_-\|NTP-transferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|274516
NZ_CP050150.1\|WP_043488919.1\|4169483_4170257_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|235924
NZ_CP050150.1\|WP_166493698.1\|4186045_4188922_-\|molybdopterin-dependent-oxidoreductase-Mo/Fe-S-binding-subunit	unknown	unknown	gnl\|CDD\|182084
NZ_CP050150.1\|WP_103010360.1\|4184425_4185814_-\|purine-permease	unknown	unknown	gnl\|CDD\|274468
NZ_CP050150.1\|WP_025798509.1\|4181450_4182818_-\|NCS2-family-permease	unknown	unknown	gnl\|CDD\|225161
NZ_CP050150.1\|WP_043488906.1\|4177158_4177851_-\|LrgB-family-protein	unknown	unknown	gnl\|CDD\|224265
NZ_CP050150.1\|WP_166493697.1\|4183071_4184388_-\|guanine-deaminase	unknown	unknown	gnl\|CDD\|236419
NZ_CP050150.1\|WP_025798503.1\|4177847_4178288_-\|CidA/LrgA-family-protein	unknown	unknown	gnl\|CDD\|224298
NZ_CP050150.1\|WP_043488914.1\|4171129_4172566_-\|6-phospho-beta-glucosidase	unknown	unknown	gnl\|CDD\|184975
NZ_CP050150.1\|WP_166493696.1\|4178434_4179349_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176129

Protein	Function_ID	Function_description	E-value
NZ_CP050150.1\|WP_043488909.1\|4176716_4177052_+\|DUF2002-family-protein	gnl\|CDD\|370464	pfam09400, DUF2002, Protein of unknown function (DUF2002). This is a family of putative cytoplasmic proteins. The structure of these proteins form an antiparallel beta and sheet and contain some alpha helical regions.	1.31824e-58
NZ_CP050150.1\|WP_166493699.1\|4188923_4189703_-\|molybdopterin-dependent-oxidoreductase-FAD-binding-subunit	gnl\|CDD\|182083	PRK09799, PRK09799, putative oxidoreductase; Provisional.	3.18904e-127
NZ_CP050150.1\|WP_025798518.1\|4189768_4191097_-\|putative-aminohydrolase-SsnA	gnl\|CDD\|132357	TIGR03314, Se_ssnA, putative selenium metabolism protein SsnA. Members of this protein family are found exclusively in genomes that contain putative set of labile selenium-dependent enzyme accessory proteins as well as homologs of a labile selenium-dependent purine hydroxylase. A mutant in this gene in Escherichia coli had improved stationary phase viability. The function is unknown.	0
NZ_CP050150.1\|WP_166493694.1\|4174300_4175032_-\|MurR/RpiR-family-transcriptional-regulator	gnl\|CDD\|224651	COG1737, RpiR, Transcriptional regulators [Transcription].	4.20013e-56
NZ_CP050150.1\|WP_166493852.1\|4195242_4196055_+\|putative-selenium-dependent-hydroxylase-accessory-protein-YqeC	gnl\|CDD\|274467	TIGR03172, Uncharacterized_protein_YqeC, probable selenium-dependent hydroxylase accessory protein YqeC. This uncharacterized protein family includes YqeC from Escherichia coli. A phylogenetic profiling analysis shows correlation with SelD, the selenium donor protein, even in species where SelD contributes to neither selenocysteine nor selenouridine biosynthesis. Instead, this family, and families TIGR03309 and TIGR03310 appear to mark selenium-dependent molybdenum hydroxylase maturation systems. [Unknown function, General].	3.11297e-59
NZ_CP050150.1\|WP_025798493.1\|4172603_4174121_-\|PTS-transporter-subunit-EIIC	gnl\|CDD\|273919	TIGR01995, beta-glucosides_PTS_EIIBCA, PTS system, beta-glucoside-specific IIABC component. This model represents a family of PTS enzyme II proteins in which all three domains are found in the same polypeptide chain and which appear to have a broad specificity for beta-glucosides including salicin (beta-D-glucose-1-salicylate) and arbutin (Hydroquinone-O-beta-D-glucopyranoside). These are distinct from the closely related sucrose-specific and trehalose-specific PTS transporters.	4.22938e-150
NZ_CP050150.1\|WP_043488882.1\|4191099_4194186_-\|putative-selenate-reductase-subunit-YgfK	gnl\|CDD\|236630	PRK09853, PRK09853, putative selenate reductase subunit YgfK; Provisional.	0
NZ_CP050150.1\|WP_046448917.1\|4179563_4181213_-\|Na+/H+-antiporter	gnl\|CDD\|129911	TIGR00831, Putative_Na+/H+_exchanger_Rv2287/MT2345/Mb2309., Na+/H+ antiporter, bacterial form. The Monovalent Cation:Proton Antiporter-1 (CPA1) Family (TC 2.A.36) The CPA1 family is a large family of proteins derived from Gram-positive and Gram-negative bacteria, blue green bacteria, yeast, plants and animals. Transporters from eukaryotes have been functionally characterized, and all of these catalyze Na+:H+ exchange. Their primary physiological functions may be in (1) cytoplasmic pH regulation, extruding the H+ generated during metabolism, and (2) salt tolerance (in plants), due to Na+ uptake into vacuoles. This model is specific for the bacterial members of this family. [Transport and binding proteins, Cations and iron carrying compounds].	0
NZ_CP050150.1\|WP_166493695.1\|4175177_4176491_-\|bifunctional-glucose-1-phosphatase/inositol-phosphatase	gnl\|CDD\|182284	PRK10173, PRK10173, glucose-1-phosphatase/inositol phosphatase; Provisional.	0
NZ_CP050150.1\|WP_096388587.1\|4194575_4195211_-\|NTP-transferase-domain-containing-protein	gnl\|CDD\|274516	TIGR03310, matur_MocA_YgfJ, molybdenum cofactor cytidylyltransferase. Members of this protein include MocA, which transfers cytosine from CTP to molybdopterin during molybdopterin cytosine dinucleotide (MCD) cofactor biosynthesis. It is distantly related to MobA, the GTP:molybdopterin guanylyltransferase. The MocA family is particularly closely related in phylogenetic distribution to other markers of selenium-dependent molybdenum hydroxylases (SDMH), suggesting most SDMH must use MCD rather than molybdopterin guanine dinucleotide.	8.37585e-58
NZ_CP050150.1\|WP_043488919.1\|4169483_4170257_+\|SDR-family-oxidoreductase	gnl\|CDD\|235924	PRK07063, PRK07063, SDR family oxidoreductase.	1.31387e-66
NZ_CP050150.1\|WP_166493698.1\|4186045_4188922_-\|molybdopterin-dependent-oxidoreductase-Mo/Fe-S-binding-subunit	gnl\|CDD\|182084	PRK09800, PRK09800, putative hypoxanthine oxidase; Provisional.	0
NZ_CP050150.1\|WP_103010360.1\|4184425_4185814_-\|purine-permease	gnl\|CDD\|274468	TIGR03173, pbuX, xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.	1.57033e-134
NZ_CP050150.1\|WP_043488906.1\|4177158_4177851_-\|LrgB-family-protein	gnl\|CDD\|224265	COG1346, LrgB, Putative effector of murein hydrolase [Cell envelope biogenesis, outer membrane].	7.80313e-87
NZ_CP050150.1\|WP_025798509.1\|4181450_4182818_-\|NCS2-family-permease	gnl\|CDD\|225161	COG2252, COG2252, Xanthine/uracil/vitamin C permease [Nucleotide transport and metabolism].	1.496e-147
NZ_CP050150.1\|WP_166493697.1\|4183071_4184388_-\|guanine-deaminase	gnl\|CDD\|236419	PRK09228, PRK09228, guanine deaminase; Provisional.	0
NZ_CP050150.1\|WP_025798503.1\|4177847_4178288_-\|CidA/LrgA-family-protein	gnl\|CDD\|224298	COG1380, COG1380, Putative effector of murein hydrolase LrgA [General function prediction only].	4.05226e-29
NZ_CP050150.1\|WP_043488914.1\|4171129_4172566_-\|6-phospho-beta-glucosidase	gnl\|CDD\|184975	PRK15014, PRK15014, 6-phospho-beta-glucosidase BglA; Provisional.	0
NZ_CP050150.1\|WP_166493696.1\|4178434_4179349_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176129	cd08438, PBP2_CidR, The C-terminal substrate binding domain of LysR-like transcriptional regulator CidR, contains the type 2 periplasmic binding fold. This CD includes the substrate binding domain of CidR which positively up-regulates the expression of cidABC operon in the presence of acetic acid produced by the metabolism of excess glucose. The CidR affects the control of murein hydrolase activity by enhancing cidABC expression in the presence of acetic acid. Thus, up-regulation of cidABC expression results in increased murein hydrolase activity. This substrate binding domain has significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	3.41983e-78

>NZ_CP050150.1|WP_166493696.1|4178434_4179349_+|LysR-family-transcriptional-regulator
MDVRTLRYFVEVVRQQSFTRAAEKLFVTQPTISKMLRHLEDELGCTLLIREGRRLHLTDSGQAVYQRGLAILDQFSQLRAELEDISTVKRGQLKLGIPPMVGTQMAGLINEFRHNYPGIELIISEFGGLTVEQAVLSGELDLALTALSGDTDGDIASLPLFSHPLCVLVPRTEEWLPRTSIAMPELAEQNILIYNEDFALYKQLMQAFAAHNVTPQIAVRSGQWDFLAAMVQAGVGIAILPEPICQRLDPKTLLWLPLEPKLMWELGLIWCEGRYLSHSAQAWIARCREYWPNGEMHPEWITLK
>NZ_CP050150.1|WP_025798503.1|4177847_4178288_-|CidA/LrgA-family-protein
MSLALRSRAPFVLSRLQVPVQVALYAALFLVAQWAVVRFHLPLPANIVGMLMLLAMIVLRVLPIKWVKAGSRWLLAEMLLFFVPAVVAVVNYASLLMVEGWRIFAVIAVSTTLTLGLTALVVDRVYRLEIYLQRKKQSAAYKRDRA
>NZ_CP050150.1|WP_043488906.1|4177158_4177851_-|LrgB-family-protein
MSSLSISVLCLLMTLALYFANKKIYRRLHTIWMMPLVLTPLILVLFLVVTHVSYQDYMGESHWLLWLLGPATIAFAVPVYENMTVIRRHWMSLSAGVITATVVAVSSSVWLARLLTLPEEVQRSLAVRSITTPFALEAAKQLGGQPDLVALFVVITGVFGMAVGDILFLRLAVRSGMAKGAGLGASSHGAGTAKAYEIGQTEGVVSSLVMMLAGVVTVVLAPLIGHVMWS
>NZ_CP050150.1|WP_043488909.1|4176716_4177052_+|DUF2002-family-protein
MYLRPDEVAQVLERTGFIRDYVTDKAYGFHKGDHYVYVNREARMGRTALVIHPALGQKSLKFAHPAEPLRSSVAYTRFPQDPHAVETAFVGIPHGFTSRARLSQYLEKMFQ
>NZ_CP050150.1|WP_166493695.1|4175177_4176491_-|bifunctional-glucose-1-phosphatase/inositol-phosphatase
MKKITKGFFSLSALALFIPLAAQSADVSPAAPEGYQLEQVLIFSRHGIRAPLVGYGDILAESTPHQWPVWKTEGGLLTPKGAEVETLFGKYMRDWLAQTGILPAGGGPTDGAVFIYANSLPRTIDTAKSFVSGAFPECSLKVNHQAKIGTMDPTFNPIITAKVTDEFKQKAIESINQHAGQGGIDGLNERLKPNYAVLQQVMGYGQSKVCTEKKTCSMAEQPNTVNIVQDKEPGITGPLRVGTGASDGFMLQYYEGYPLKEVAWGQITDEKQWQQLEEIKNLYHETLFGSSAVAQNAAAPLMRFISAALVGTPDNNALAADAHKAKVAVLVGHDSNIASLLAAMKTAEYELPKQYEKTPISGKIVFQRWHDKNDNRDLMKIEYVYQSTDQIRNATPLSLSSPAQRVVLQIDGCKIDANGFCPMDDFKTAIAKDIQGE
>NZ_CP050150.1|WP_166493694.1|4174300_4175032_-|MurR/RpiR-family-transcriptional-regulator
MFTHIALSTLNGLELMVYNYVIKNKDKVMYMTIRELADEADVSTTTILRFCKKMHCSGYSEFRIRFKLYLEQEEKLLLTSGASEIMSFFKSIHNDEFEELITRTAEQIAEAERIIFVGAGTSGTLGKYGARFFSNVGKFSNYIDDPYYPISTDMYKNAIAIILSVSGETPEILKLASQFSLHHCKIISITNSETSSLARMADFNLSYHMPQILIASEYNITTQVPVIYMLEAIGKKLAKNISS
>NZ_CP050150.1|WP_025798493.1|4172603_4174121_-|PTS-transporter-subunit-EIIC
MAINYADSAKEIVKLIGSDNNVINVTHCATRLRFVLKDNSQVDKETLKRVKGVITVIESSGQLQVVIGNHVGDAYREVLKLIQVDENAAVSAPNVGIVSRLMDIISSIFAPFLYPLAACGVLQGLISLFAVLGWMDPASGTYRILNFVSWTGFTFLPVMVAYTAAKKFNVNPFTAVIAACALVCPDYMSMLTANKILLVNSADPAMQELMKEAVNNPQIARVLTEVVGIPLSADPLTFLGMPVEYLSYTSAVIPIILMVWMMSYVQRFFERILPLVIRNLFTPMFCLAIIVPLTLLVFGPIGNMIGGAIGGVYNTLYHLSPAVAGFVVGALWTPLVTLGVHWGITPVTVGNYATLGYDTFTGLQASAVFAMAGAVLGVYLKSKDAEMKRVALSAGMTGLFGITEPAIYGVALRLKRPMVCACMAGAVGGAIAGSFNAVSWSYCIPGIAVLPVFFKEGHLPQFLGFVLSISVAFVLGAVFTWFAGFKEEIPAAVTDTKAAAQPEVA
>NZ_CP050150.1|WP_043488914.1|4171129_4172566_-|6-phospho-beta-glucosidase
MKQQRLPDDFLWGGAVAAHQVEGGWDQGGKGPSIVDVLSSGSHGVDRVITDGIQDGYLYANHDAVDFYHRYKGDIALFAEMGFKCFRTSIAWSRIFPNGDEVEPNEAGLQFYDEMFDELLKYGIEPVITLSHFEMPWHLVKEYGGWKNRKVVDFFVHFSEVVIKRYQHKVKYWMTFNEINNQRNWKTPLFGYCCSGVIYTNEPNPEECMYQVLHHQFVASAQVVKLGHDINPALQIGCMIAMVPLYPYSCHPDDVMYAQEAMRERFLFGDVHMRGYYPSYILKEWERKGYHIEMQPDDKQILLDGCADYIGLSYYMSNAVQANSAGTGTALAGFEGSVPNPHVKASEWGWQIDPVGLRYTLNILYERYQKPLFIVENGFGAVDKAGADGQIHDDYRIAYLKSHIEQMKKAVIDDGVELMGYTPWGCIDCVSFTTGQYSKRYGFIYVDKHDDGTGTQERSKKQSFDWYKQVIESNGEKL
>NZ_CP050150.1|WP_025798490.1|4170618_4171050_+|hypothetical-protein
MKKTLLALFVLSPFAALAAAPAQPMIGNYHAVGYTTCGGFKVLSSAISNENVMVLQITDPISKASQIYYGNRTDDESEKVQYVLSNYDEKTKQFTPDPSNTTINFGIKMGHPGTPGNDLYNLTMAGQTYICKQFTIFNSLSKK
>NZ_CP050150.1|WP_043488919.1|4169483_4170257_+|SDR-family-oxidoreductase
MSTSAQQPRVVIVTGASQGIGHAIAQTFLKNGDIVIGCAFSPLEKAPHAKTLLDHYPEHFCYYSVDITRTESISEFVAAVEQRFGRLDVLVSNAGKNVFKGIDCELEDWHHNLDLNLRSHWYMAKCCRGMLEKSRGVILVMTSNHAFSTMPGCAPYNITKRALLSLVQSLTIEWGSAIRSVGIAPGFIDTAGNQVWFDSQGDGEKARQETIAKHPVGRIGTSEEVGELCLFLSSPAAGFIAGTTIVMDGGRSALMQD
>NZ_CP050150.1|WP_046448917.1|4179563_4181213_-|Na+/H+-antiporter
MEIFFTILILILVVSLSGVVTRMLPFQIPLPLMQIAIGALLAWPHFGLHVDFDPELFLVLFIPPLLFADGWKTPTREFLHHGREILGLALVLVLITVVGVGYFLHILLPEVPLVAAFALAAVLSPTDAVALGGIVGKGRIPKTIMGVLEGEALMNDASGLVALKFAIAVAMGTMVFTVGGATLEFLKVAIGGLLAGVAVTWLYSKSLRLMSRWAGDDPATQIVFLMLLPFASYLIAEHVGVSGILAAVAAGMTISQSGVIRNAPLTMRLRANSVWAMLEFVFNGMVFIMLGLQLPGILESSIIQAERDPTIQTWFLFTDVALVYGVLLVLRFLWLWCMRRLSLRFIKRNPLQFASYSLRDLWIASFAGVRGAITLAGVLSIPLFLTDGTPFPGRYQLVFIATGVILFSLIVGVVALPLLLKGMEVNDTNTYREEESMAKSVTAEVAIESLKKMQERLEVDTEENIDPQLLTEVSSRVIGSLRRRISTKENAEEMRKVENLERRFRLTALRAERGELYHLRATQKISNETLQKLLHDLDLLEALLVEKSG
>NZ_CP050150.1|WP_025798509.1|4181450_4182818_-|NCS2-family-permease
MSSNSSQEGSAGKSGGSLDAYFKISARGSSVRQEVLAGVTTFLAMVYSVIVVPSMLGKAGFPPGAVFVATCLVAAFGSLLMGLWANLPMAIGCAISLTAFTAFSLVLGQHISIPVALGAVFLMGVLFTLISVTGIRSWILHNLPMGIAHGTGIGIGLFLLLIAANGVGLVIKNPLEGLPVALGAFTSFPVMMSLLGLAIIFGLEKLKVPGGILLVIIGISIVGLIFDPSVKYQGLFALPSLSAADGSSLIFSLDIMGALQPVVLPSVLALVMTAVFDATGTIRAVAGQANLLDKDGQIISGGKALTADSVSSIVSSFVGASPAAVYIESAAGTAAGGKTGLTATVVGVLFLLILFLSPLSYLVPGYATAPALMYVGLLMLSNVSKLDFNDFVDAMSGLVCAVFIVLTCNIVTGIMLGFTTLVVGRIFSNEWRKLNVGTVIIAIALVAFYAGGWAI
>NZ_CP050150.1|WP_166493697.1|4183071_4184388_-|guanine-deaminase
MSGQHSLKAIRGNFLDIVKTVEQPEEIESHLRFIEDGLMLLRSGKVEWFGTWQEGKHLIPEGIRVRDYSGKMIVPGFVDTHIHYPQSEMVGAYGEQLLEWLNKHTFPAERRYNDIEYAREMSAFFIKQLLRNGTTTALVFGTVHPESVDALFEAAHNINMRMIAGKVMMDRNAPDYLLDTAQTSYSQSKALIERWHHNGRLLYAITPRFAPTSTPEQLAMAQRLREEYPDTYLHTHLCENKDEIEWVKALYPERKGYLDVYHHYGLTGKNSVFAHCVHLEEPEWDCLRDTGSSIAFCPTSNLYLGSGLFNLRKAWHKQIKVGMGTDIGAGTTFNMLQTLNEAYKVMQLQGWRMSAYEAFYLATLGGAKALGLDGIIGNFNVGKEADFVVLEPTATPLQQLRYDNSVTLMDKLFVMMTLGDDRSIYRTYVDGQLVYERT
>NZ_CP050150.1|WP_103010360.1|4184425_4185814_-|purine-permease
MYHLDDKPPLHEMLIGAVTHLLAIFVPMVAPALIVGTALGLSSEVTAYLVSMAMIASGIGTFIQVNRFGRVGSGLLSIQSVNFSFVTVMIALGGSMKKDGLDEQAIISALLGVAFVGAFLVVASSQVLPYLKRVITPTVSGVVVLMIGLSLIKVGIIDFGGGLPAKGDGSFGSYQNLGLGFLVLCVVIGFNCCQNALLRMGGIAIGLIVGYVCALFMGIVDFSPLKDLPIITIPQPFKYGFSFDFHAFLVAATIYLLSILEAVGSITATAIISERPIVGEEYDRRLSGGVLADGLVSVIACALGSLPLTTFAQNNGVIQMTGVASRHVGKYIAAILVILGLFPVIGRFFTTIPAPILGGAMTLMFSMIALAGIKIILCGGMDRRETLIVATALGIGLGVSYDPQIFRVLPDSIYVLFENPICAGGVTAIILNLLIPRVNKRGQEDELEELIKPVTENFTQAK
>NZ_CP050150.1|WP_166493698.1|4186045_4188922_-|molybdopterin-dependent-oxidoreductase-Mo/Fe-S-binding-subunit
MNIRFTLNGTPCTLSCEAGDNVQKVLFNLGLHSVRNSDDGFGFAGSDAIIFDGVVVNASLLIAAQLEGSVVRTAESLGTWNQLSPVQQAMVDVGIVQSGYNDPAAALILTELLERIPSPTRAQIDDALSGLFSRDAGYQQFYLVVELAQARMADPFCQQEIAPEFRDDLQVVGKLCPKVDSAKMVQAKPCYVEDRVPANACIIKMLRSPHPHALITHLDVSKAEALPGVVHVITHLNCPDIYYTPGGQSAPEPSPLDRRMFGKKMRHVGDRVAAVVAESEEIALAALALIDVSFEVLKPVMSIDEAMADGAPLVHDEPIVYVNGAPADLEVQNRGSATRGEHMIINFPIGAKPHSNIAAGVHGRIGDVEKGFAQADVVIERTYESTQAQQCPTETHVCFTYMDGERLVIHASTQVPWHVRRQVARLVGLKQNKVHVIKERVGGGFGSKQDILLEEVCAWATCVTGRPVYFHYTREEEFISNTTRHVAKVKVKIGATKEGKLTAIDMDFRANTGPYGNHSLTVPSNGPALSLPLYPCDNVNFQVTTYYSNICPTGAYQGYGAPKGNFALTMALAELAEQLDIDLLDMIELNRVIEGQELKILGAIGEGKMPTSVPTAASCALEPILRKGRELMNWGANKAPQGDWRIGQGVAIIMQKSGIPDIDQANCMVKLESDGTIIVHSGGADIGTGLDTVVTKLTAEVLCCSLADVHVISGDTDHALFDKGAYASSGTCFSGNAAKKAAENLKEKIRFHGAQMLGEPIDDVVIVHPSIVRGKQGEVSFAEIAHKAETGTGFGTLVATACYITPDFAFPFGANFAEVAVNVRTGEIRLDKFYALLDCGTPVNPELALGQIYGASMRAIGHSLTEKLFYDENGSPITRDLQTYGAPKIGDIPRDFRAFLVPSDDEVGPFGAKSISEIGVNGAAPAIATAIHDACGVWLREWHFTPEKILRGLNKLEA
>NZ_CP050150.1|WP_166493699.1|4188923_4189703_-|molybdopterin-dependent-oxidoreductase-FAD-binding-subunit
MIEQFFWPESVKQALELKRQFQDEAVYFGGGSKLNATPTKTTKKFGIALSKLGLDKVSLQQGKLHIGSQATLQRLIDTPLIPDALRHALGFIYSRHLRNQATFAGEIVAKQKERVLLPVLLVLDALVVTAKGETLNLEEYLDNDRDDLLLEVILPDPYQNCSTRKIARSAAGLAVITAAVATGSHGEMKIALDGVSERAIRLRDVESRGLISDDELEKAVSDAISPRADIGGSEAYKRYIAGVVVAELLADCQQMSEEK
>NZ_CP050150.1|WP_025798518.1|4189768_4191097_-|putative-aminohydrolase-SsnA
MLILKNVTAVQFEPAWVQHGIDIAIEGSLIKEVGSQLVAKYPQADVKDMQGKWVMPGIVCAHNHFYSGLSRGIMANIAPSPDFISTLKNLWWRLDRALDEESLYYSGLICSLEAIKSGCTAVIDHHASPNYIAGSLNTLRKGFIKAGLRGMTCFETTDRNGGNKELQAGVEENIAFARLIDNAKKQGSEPYLVEAHIGAHAPFTVSDAGLDMLREAIKATGRGLHIHAAEDSYDVSHSHDKYGKDLIVRLAEHDLIDAKTLVAHGLYLSEADIQIINRQDAFLVHNARSNMNNHVGYNHRIGEYQNVALGTDGIGSDMFEELKFAFFKHRDAGGPMWPDSFTRFLWNGNRLLERNFGAQFGCLAAGYKADLTVCDYPEPTPLAAQNIGGHLAFGMGSGSVRSVMVEGRFVYENGQFPFDVTPIYAEASKVAARLWKRMDDLA
>NZ_CP050150.1|WP_043488882.1|4191099_4194186_-|putative-selenate-reductase-subunit-YgfK
MGDIMRPVPFKELLTRVFDEYNESHSIFGIPEQQFYRKDNDRLIKVFGETCETPMGPAAGPHTQLAQNIIVSWLTGGRFIELKTVQILDRLELDKPCIDAEDECFNTEWSTEFTLQKAHDEYLKAWFVLHLLEALFDPRTQGEAKSFIFNMSVGYNLEGIKQPAMQNFIHSMMDSGQHPKYAEYQSILSHFIREQFESRSAQLSQLPQQIPAQMVHGVTLSTMHGCPPNEIEAICRYMLEEKGLNTFVKLNPTLLGYPRVREILDTCGFDYIGLKEESFEHDLKLEQAISMLQRLTALGQQKQLSFGVKLTNTLGTINHKGALPGEEMYMSGRALFPLSINVAAVLSRAFDGKLPISYSGGASKFNIRDIFDTGIRPITMATDLLKPGGYLRQLECMRELDQSDSWGMTKVDVERLEALAKKAVSMEYTQKHWKAQDRIDAGGPLPMTDCYVAPCVTACAIKQDIPEYIRLLGEQRYADALELIYQRNALPAITGHICDHQCQYNCTRMDYDSALNIRELKKVALEKGWDEYQKRWHKPAGSGSKHPVAVLGAGPAGLSAGYFLARAGYQVTLFEREANAGGVVKNIIPQFRIPAETIQHDIDFVAAHGVKFEFGCDPALTVDKLTQQGFRYVFIGVGTDKNSGVKLAGDNRNVYKSLPFLRSYNRGDKLSLGRHVAVVGAGNTAMDCARAALKVPGVEDVTVIYRRTLNEMPAYREEYEEAVEDGVKFMFLTNPEQFDADGTLTARVMELGEPDEKGRRRPVATDKTIKLRMDALITAIGEQADCAALSAMGVPLNAEGWPAVNAETGETPRPNVFLIGDVQSGPSSIVAAISTARRATDEVLKRENIRTHHSDKQWSNVDPAEIYQRKGAISVLMVDKEEREAFVAQEAQRCLECNYICSKCVDVCPNRANVSIAVPGFHDRFQTLHLDAYCNECGNCAQFCPWQGKPYKDKITIYSLPEDFTNSTNPGFFVDNDNVSVRQGKQIWHLHIDKQGQLDDVPPELEDMCRIISHVHNHHHYLLGRVEV
>NZ_CP050150.1|WP_096388587.1|4194575_4195211_-|NTP-transferase-domain-containing-protein
MMNQKRGKHPYANISPVENLKPRENVDCIITAAGLSSRMGQWKMMLPYKEGTILDSSIENARQFCSRIILVVGYRGDELYDRYNTASDVTVVVNNNYVSGLFSSIQAAGPIVKTDYCFITHGDIPCLNRDIFHQVWLKRGPYALLPCHQGTPGHPVLLPQKIIKRACQDDVSVSSMREFLLAGEYRYLNMPQPQTIMDIDTPEAYQRLLKI
>NZ_CP050150.1|WP_166493852.1|4195242_4196055_+|putative-selenium-dependent-hydroxylase-accessory-protein-YqeC
MNFDLDVLFNDVLSSVKNNKSYLISLIGAGGKTSTLFWLAQRFSQQGLSVLITTTTHMYRPEPSQAQTIIEKEDWHALLTHQKASSSTPKIVALFTEYNAATHKVSGITPEQADMLQAAQLFDVILVEADGAHQQLLKAPAGHEPCIPQSSKCVIALTGGLVINNPADPEQIHRWPIFADLCGIKSGDRLNISVFERFIAHPDGMFKGTPPHALRVWFINRLYQIDNALLGSLTALLKARPELNTIWIGAVQESPPITHQLCQSQTTSRN

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP050150_3	3.19\|2954647\|32\|NZ_CP050150\|PILER-CR,CRISPRCasFinder,CRT	2954647-2954678	32	NZ_CP050150.1	3124699-3124730	0	1.0
NZ_CP050150_4	4.1\|3034047\|45\|NZ_CP050150\|CRISPRCasFinder	3034047-3034091	45	NZ_CP050150.1	2321862-2321906	2	0.956
NZ_CP050150_4	4.1\|3034047\|45\|NZ_CP050150\|CRISPRCasFinder	3034047-3034091	45	NZ_CP050150.1	3285287-3285331	2	0.956

1. spacer 3.19|2954647|32|NZ_CP050150|PILER-CR,CRISPRCasFinder,CRT matches to position: 3124699-3124730, mismatch: 0, identity: 1.0

tccaacaaatcgcgtgattgtcctcgtgtata	CRISPR spacer
tccaacaaatcgcgtgattgtcctcgtgtata	Protospacer
********************************

2. spacer 4.1|3034047|45|NZ_CP050150|CRISPRCasFinder matches to position: 2321862-2321906, mismatch: 2, identity: 0.956

cctttcaccacacttaagctataaaggcgattgagccgccttgct	CRISPR spacer
cctttcaccacgcttaagctataacggcgattgagccgccttgct	Protospacer
***********.************ ********************

3. spacer 4.1|3034047|45|NZ_CP050150|CRISPRCasFinder matches to position: 3285287-3285331, mismatch: 2, identity: 0.956

cctttcaccacacttaagctataaaggcgattgagccgccttgct	CRISPR spacer
cctttcaccacgcttaagctataacggcgattgagccgccttgct	Protospacer
***********.************ ********************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP050150_5	5.1\|4179424\|27\|NZ_CP050150\|CRISPRCasFinder	4179424-4179450	27	NZ_CP036488	Rahnella aquatilis strain MEM40 plasmid pMEM40-1, complete sequence	120191-120217	3	0.889
NZ_CP050150_5	5.1\|4179424\|27\|NZ_CP050150\|CRISPRCasFinder	4179424-4179450	27	NZ_CP032297	Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence	449087-449113	3	0.889
NZ_CP050150_5	5.1\|4179424\|27\|NZ_CP050150\|CRISPRCasFinder	4179424-4179450	27	NC_017060	Rahnella aquatilis HX2 plasmid PRA1, complete sequence	196153-196179	3	0.889
NZ_CP050150_5	5.1\|4179424\|27\|NZ_CP050150\|CRISPRCasFinder	4179424-4179450	27	NC_015062	Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequence	199338-199364	3	0.889
NZ_CP050150_5	5.1\|4179424\|27\|NZ_CP050150\|CRISPRCasFinder	4179424-4179450	27	NZ_CP034838	Rahnella aquatilis strain KM12 plasmid pKM12v1, complete sequence	185528-185554	3	0.889
NZ_CP050150_5	5.1\|4179424\|27\|NZ_CP050150\|CRISPRCasFinder	4179424-4179450	27	NZ_CP034838	Rahnella aquatilis strain KM12 plasmid pKM12v1, complete sequence	417486-417512	3	0.889
NZ_CP050150_5	5.1\|4179424\|27\|NZ_CP050150\|CRISPRCasFinder	4179424-4179450	27	NZ_CP034839	Rahnella aquatilis strain KM25 plasmid pKM12v2, complete sequence	185528-185554	3	0.889
NZ_CP050150_5	5.1\|4179424\|27\|NZ_CP050150\|CRISPRCasFinder	4179424-4179450	27	NZ_CP034839	Rahnella aquatilis strain KM25 plasmid pKM12v2, complete sequence	417486-417512	3	0.889
NZ_CP050150_5	5.1\|4179424\|27\|NZ_CP050150\|CRISPRCasFinder	4179424-4179450	27	NZ_CP034837	Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence	145852-145878	3	0.889
NZ_CP050150_5	5.1\|4179424\|27\|NZ_CP050150\|CRISPRCasFinder	4179424-4179450	27	NZ_CP036488	Rahnella aquatilis strain MEM40 plasmid pMEM40-1, complete sequence	351153-351179	4	0.852
NZ_CP050150_5	5.1\|4179424\|27\|NZ_CP050150\|CRISPRCasFinder	4179424-4179450	27	NZ_CP022366	Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence	221647-221673	4	0.852
NZ_CP050150_5	5.1\|4179424\|27\|NZ_CP050150\|CRISPRCasFinder	4179424-4179450	27	NZ_CP032297	Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence	214204-214230	4	0.852
NZ_CP050150_5	5.1\|4179424\|27\|NZ_CP050150\|CRISPRCasFinder	4179424-4179450	27	NZ_CP032297	Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence	220964-220990	4	0.852
NZ_CP050150_5	5.1\|4179424\|27\|NZ_CP050150\|CRISPRCasFinder	4179424-4179450	27	NC_017060	Rahnella aquatilis HX2 plasmid PRA1, complete sequence	439224-439250	4	0.852
NZ_CP050150_5	5.1\|4179424\|27\|NZ_CP050150\|CRISPRCasFinder	4179424-4179450	27	NC_015062	Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequence	434871-434897	4	0.852
NZ_CP050150_5	5.1\|4179424\|27\|NZ_CP050150\|CRISPRCasFinder	4179424-4179450	27	NZ_CP034838	Rahnella aquatilis strain KM12 plasmid pKM12v1, complete sequence	424246-424272	4	0.852
NZ_CP050150_5	5.1\|4179424\|27\|NZ_CP050150\|CRISPRCasFinder	4179424-4179450	27	NZ_CP034839	Rahnella aquatilis strain KM25 plasmid pKM12v2, complete sequence	424246-424272	4	0.852
NZ_CP050150_5	5.1\|4179424\|27\|NZ_CP050150\|CRISPRCasFinder	4179424-4179450	27	NZ_CP034837	Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence	373993-374019	4	0.852
NZ_CP050150_5	5.1\|4179424\|27\|NZ_CP050150\|CRISPRCasFinder	4179424-4179450	27	NZ_CP034837	Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence	380753-380779	4	0.852
NZ_CP050150_3	3.10\|2954107\|32\|NZ_CP050150\|PILER-CR,CRISPRCasFinder,CRT	2954107-2954138	32	MN855766	Bacteriophage sp. isolate 10, complete genome	20133-20164	5	0.844
NZ_CP050150_5	5.1\|4179424\|27\|NZ_CP050150\|CRISPRCasFinder	4179424-4179450	27	NZ_CP036488	Rahnella aquatilis strain MEM40 plasmid pMEM40-1, complete sequence	351258-351284	5	0.815
NZ_CP050150_5	5.1\|4179424\|27\|NZ_CP050150\|CRISPRCasFinder	4179424-4179450	27	NZ_CP036488	Rahnella aquatilis strain MEM40 plasmid pMEM40-1, complete sequence	86672-86698	5	0.815
NZ_CP050150_5	5.1\|4179424\|27\|NZ_CP050150\|CRISPRCasFinder	4179424-4179450	27	NZ_CP032297	Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence	214099-214125	5	0.815
NZ_CP050150_5	5.1\|4179424\|27\|NZ_CP050150\|CRISPRCasFinder	4179424-4179450	27	NZ_CP032297	Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence	211581-211607	5	0.815
NZ_CP050150_5	5.1\|4179424\|27\|NZ_CP050150\|CRISPRCasFinder	4179424-4179450	27	NZ_CP032297	Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence	482610-482636	5	0.815
NZ_CP050150_5	5.1\|4179424\|27\|NZ_CP050150\|CRISPRCasFinder	4179424-4179450	27	NC_017060	Rahnella aquatilis HX2 plasmid PRA1, complete sequence	439329-439355	5	0.815
NZ_CP050150_5	5.1\|4179424\|27\|NZ_CP050150\|CRISPRCasFinder	4179424-4179450	27	NC_017060	Rahnella aquatilis HX2 plasmid PRA1, complete sequence	162621-162647	5	0.815
NZ_CP050150_5	5.1\|4179424\|27\|NZ_CP050150\|CRISPRCasFinder	4179424-4179450	27	NC_015062	Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequence	165804-165830	5	0.815
NZ_CP050150_5	5.1\|4179424\|27\|NZ_CP050150\|CRISPRCasFinder	4179424-4179450	27	NZ_CP034838	Rahnella aquatilis strain KM12 plasmid pKM12v1, complete sequence	424351-424377	5	0.815
NZ_CP050150_5	5.1\|4179424\|27\|NZ_CP050150\|CRISPRCasFinder	4179424-4179450	27	NZ_CP034838	Rahnella aquatilis strain KM12 plasmid pKM12v1, complete sequence	152004-152030	5	0.815
NZ_CP050150_5	5.1\|4179424\|27\|NZ_CP050150\|CRISPRCasFinder	4179424-4179450	27	NZ_CP034838	Rahnella aquatilis strain KM12 plasmid pKM12v1, complete sequence	426865-426891	5	0.815
NZ_CP050150_5	5.1\|4179424\|27\|NZ_CP050150\|CRISPRCasFinder	4179424-4179450	27	NZ_CP034839	Rahnella aquatilis strain KM25 plasmid pKM12v2, complete sequence	424351-424377	5	0.815
NZ_CP050150_5	5.1\|4179424\|27\|NZ_CP050150\|CRISPRCasFinder	4179424-4179450	27	NZ_CP034839	Rahnella aquatilis strain KM25 plasmid pKM12v2, complete sequence	152004-152030	5	0.815
NZ_CP050150_5	5.1\|4179424\|27\|NZ_CP050150\|CRISPRCasFinder	4179424-4179450	27	NZ_CP034839	Rahnella aquatilis strain KM25 plasmid pKM12v2, complete sequence	426865-426891	5	0.815
NZ_CP050150_5	5.1\|4179424\|27\|NZ_CP050150\|CRISPRCasFinder	4179424-4179450	27	NZ_CP034837	Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence	380858-380884	5	0.815
NZ_CP050150_5	5.1\|4179424\|27\|NZ_CP050150\|CRISPRCasFinder	4179424-4179450	27	NZ_CP034837	Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence	112329-112355	5	0.815
NZ_CP050150_5	5.1\|4179424\|27\|NZ_CP050150\|CRISPRCasFinder	4179424-4179450	27	NZ_CP034837	Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence	383376-383402	5	0.815
NZ_CP050150_5	5.1\|4179424\|27\|NZ_CP050150\|CRISPRCasFinder	4179424-4179450	27	NZ_CP007794	Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence	1171189-1171215	5	0.815
NZ_CP050150_5	5.1\|4179424\|27\|NZ_CP050150\|CRISPRCasFinder	4179424-4179450	27	NZ_CP007797	Azospirillum brasilense strain Az39 plasmid AbAZ39_p4, complete sequence	54908-54934	5	0.815
NZ_CP050150_5	5.1\|4179424\|27\|NZ_CP050150\|CRISPRCasFinder	4179424-4179450	27	NZ_CP032340	Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence	124319-124345	5	0.815
NZ_CP050150_5	5.1\|4179424\|27\|NZ_CP050150\|CRISPRCasFinder	4179424-4179450	27	NZ_CP012915	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence	261697-261723	5	0.815
NZ_CP050150_5	5.1\|4179424\|27\|NZ_CP050150\|CRISPRCasFinder	4179424-4179450	27	NZ_CP036488	Rahnella aquatilis strain MEM40 plasmid pMEM40-1, complete sequence	86745-86771	6	0.778
NZ_CP050150_5	5.1\|4179424\|27\|NZ_CP050150\|CRISPRCasFinder	4179424-4179450	27	NZ_CP036488	Rahnella aquatilis strain MEM40 plasmid pMEM40-1, complete sequence	120295-120321	6	0.778
NZ_CP050150_5	5.1\|4179424\|27\|NZ_CP050150\|CRISPRCasFinder	4179424-4179450	27	NZ_CP032297	Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence	211476-211502	6	0.778
NZ_CP050150_5	5.1\|4179424\|27\|NZ_CP050150\|CRISPRCasFinder	4179424-4179450	27	NZ_CP032297	Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence	448983-449009	6	0.778
NZ_CP050150_5	5.1\|4179424\|27\|NZ_CP050150\|CRISPRCasFinder	4179424-4179450	27	NZ_CP032297	Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence	482537-482563	6	0.778
NZ_CP050150_5	5.1\|4179424\|27\|NZ_CP050150\|CRISPRCasFinder	4179424-4179450	27	NZ_CP032297	Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence	211396-211422	6	0.778
NZ_CP050150_5	5.1\|4179424\|27\|NZ_CP050150\|CRISPRCasFinder	4179424-4179450	27	NC_017060	Rahnella aquatilis HX2 plasmid PRA1, complete sequence	162694-162720	6	0.778
NZ_CP050150_5	5.1\|4179424\|27\|NZ_CP050150\|CRISPRCasFinder	4179424-4179450	27	NC_017060	Rahnella aquatilis HX2 plasmid PRA1, complete sequence	196257-196283	6	0.778
NZ_CP050150_5	5.1\|4179424\|27\|NZ_CP050150\|CRISPRCasFinder	4179424-4179450	27	NC_015062	Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequence	165877-165903	6	0.778
NZ_CP050150_5	5.1\|4179424\|27\|NZ_CP050150\|CRISPRCasFinder	4179424-4179450	27	NC_015062	Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequence	199442-199468	6	0.778
NZ_CP050150_5	5.1\|4179424\|27\|NZ_CP050150\|CRISPRCasFinder	4179424-4179450	27	NZ_CP034838	Rahnella aquatilis strain KM12 plasmid pKM12v1, complete sequence	152077-152103	6	0.778
NZ_CP050150_5	5.1\|4179424\|27\|NZ_CP050150\|CRISPRCasFinder	4179424-4179450	27	NZ_CP034838	Rahnella aquatilis strain KM12 plasmid pKM12v1, complete sequence	185640-185666	6	0.778
NZ_CP050150_5	5.1\|4179424\|27\|NZ_CP050150\|CRISPRCasFinder	4179424-4179450	27	NZ_CP034839	Rahnella aquatilis strain KM25 plasmid pKM12v2, complete sequence	152077-152103	6	0.778
NZ_CP050150_5	5.1\|4179424\|27\|NZ_CP050150\|CRISPRCasFinder	4179424-4179450	27	NZ_CP034839	Rahnella aquatilis strain KM25 plasmid pKM12v2, complete sequence	185640-185666	6	0.778
NZ_CP050150_5	5.1\|4179424\|27\|NZ_CP050150\|CRISPRCasFinder	4179424-4179450	27	NZ_CP034837	Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence	112402-112428	6	0.778
NZ_CP050150_5	5.1\|4179424\|27\|NZ_CP050150\|CRISPRCasFinder	4179424-4179450	27	NZ_CP034837	Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence	145956-145982	6	0.778
NZ_CP050150_5	5.1\|4179424\|27\|NZ_CP050150\|CRISPRCasFinder	4179424-4179450	27	NZ_CP034837	Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence	383481-383507	6	0.778
NZ_CP050150_5	5.1\|4179424\|27\|NZ_CP050150\|CRISPRCasFinder	4179424-4179450	27	NZ_CP034837	Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence	383561-383587	6	0.778
NZ_CP050150_5	5.1\|4179424\|27\|NZ_CP050150\|CRISPRCasFinder	4179424-4179450	27	NZ_CP032322	Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence	1413600-1413626	6	0.778
NZ_CP050150_5	5.1\|4179424\|27\|NZ_CP050150\|CRISPRCasFinder	4179424-4179450	27	NZ_CP007794	Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence	999201-999227	6	0.778
NZ_CP050150_5	5.1\|4179424\|27\|NZ_CP050150\|CRISPRCasFinder	4179424-4179450	27	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	125063-125089	6	0.778
NZ_CP050150_5	5.1\|4179424\|27\|NZ_CP050150\|CRISPRCasFinder	4179424-4179450	27	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	924182-924208	6	0.778
NZ_CP050150_3	3.2\|2953627\|32\|NZ_CP050150\|PILER-CR,CRISPRCasFinder,CRT	2953627-2953658	32	AP014720	Arthrobacter sp. Hiyo8 plasmid pHiyo8-1 DNA, complete genome, strain: Hiyo8	240645-240676	7	0.781
NZ_CP050150_3	3.10\|2954107\|32\|NZ_CP050150\|PILER-CR,CRISPRCasFinder,CRT	2954107-2954138	32	NZ_CP054047	Yersinia massiliensis strain 2011N-4075 plasmid unnamed2, complete sequence	78205-78236	7	0.781
NZ_CP050150_2	2.7\|2883100\|32\|NZ_CP050150\|CRISPRCasFinder,CRT,PILER-CR	2883100-2883131	32	NZ_CP026653	Streptomyces dengpaensis strain XZHG99 plasmid unnamed1, complete sequence	87447-87478	8	0.75
NZ_CP050150_3	3.14\|2954347\|32\|NZ_CP050150\|PILER-CR,CRISPRCasFinder,CRT	2954347-2954378	32	NC_048720	Streptomyces phage Blueeyedbeauty, complete genome	59208-59239	8	0.75
NZ_CP050150_2	2.7\|2883100\|32\|NZ_CP050150\|CRISPRCasFinder,CRT,PILER-CR	2883100-2883131	32	LN713927	Pseudomonas fluorescens SBW25 plasmid pQBR55, complete sequence	107250-107281	9	0.719
NZ_CP050150_3	3.7\|2953927\|32\|NZ_CP050150\|PILER-CR,CRISPRCasFinder,CRT	2953927-2953958	32	NZ_CP004389	Thalassospira xiamenensis M-5 = DSM 17429 strain M-5 plasmid unnamed, complete sequence	74699-74730	9	0.719
NZ_CP050150_3	3.9\|2954047\|32\|NZ_CP050150\|PILER-CR,CRISPRCasFinder,CRT	2954047-2954078	32	AP022644	Bacillus wiedmannii PL1 plasmid pBwiPL1-1 DNA, complete sequence	67219-67250	9	0.719
NZ_CP050150_3	3.9\|2954047\|32\|NZ_CP050150\|PILER-CR,CRISPRCasFinder,CRT	2954047-2954078	32	NZ_CP013276	Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-1-360K, complete sequence	4742-4773	9	0.719
NZ_CP050150_3	3.9\|2954047\|32\|NZ_CP050150\|PILER-CR,CRISPRCasFinder,CRT	2954047-2954078	32	NZ_CP039722	Bacillus thuringiensis strain BT-59 plasmid p1, complete sequence	142091-142122	9	0.719
NZ_CP050150_3	3.9\|2954047\|32\|NZ_CP050150\|PILER-CR,CRISPRCasFinder,CRT	2954047-2954078	32	NZ_CP009349	Bacillus thuringiensis HD1002 plasmid 1, complete sequence	80742-80773	9	0.719
NZ_CP050150_3	3.9\|2954047\|32\|NZ_CP050150\|PILER-CR,CRISPRCasFinder,CRT	2954047-2954078	32	NZ_CP045023	Bacillus thuringiensis strain JW-1 plasmid p1, complete sequence	4742-4773	9	0.719
NZ_CP050150_3	3.9\|2954047\|32\|NZ_CP050150\|PILER-CR,CRISPRCasFinder,CRT	2954047-2954078	32	NZ_CP018741	Bacillus cereus strain FORC_047 plasmid pFORC47_1, complete sequence	125611-125642	9	0.719
NZ_CP050150_3	3.2\|2953627\|32\|NZ_CP050150\|PILER-CR,CRISPRCasFinder,CRT	2953627-2953658	32	NZ_CP009266	Vibrio coralliilyticus strain OCN014 plasmid pOCN014, complete sequence	227393-227424	10	0.688
NZ_CP050150_3	3.14\|2954347\|32\|NZ_CP050150\|PILER-CR,CRISPRCasFinder,CRT	2954347-2954378	32	MF417907	Uncultured Caudovirales phage clone 7F_7, partial genome	11383-11414	10	0.688

1. spacer 5.1|4179424|27|NZ_CP050150|CRISPRCasFinder matches to NZ_CP036488 (Rahnella aquatilis strain MEM40 plasmid pMEM40-1, complete sequence) position: , mismatch: 3, identity: 0.889

aactcctccccctgcgaaggggaggct	CRISPR spacer
aactccctcccctgcgaaggggagggt	Protospacer
******..***************** *

2. spacer 5.1|4179424|27|NZ_CP050150|CRISPRCasFinder matches to NZ_CP032297 (Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence) position: , mismatch: 3, identity: 0.889

aactcctccccctgcgaaggggaggct	CRISPR spacer
aactccctcccctgcgaaggggagggt	Protospacer
******..***************** *

3. spacer 5.1|4179424|27|NZ_CP050150|CRISPRCasFinder matches to NC_017060 (Rahnella aquatilis HX2 plasmid PRA1, complete sequence) position: , mismatch: 3, identity: 0.889

aactcctccccctgcgaaggggaggct	CRISPR spacer
aactccctcccctgcgaaggggagggt	Protospacer
******..***************** *

4. spacer 5.1|4179424|27|NZ_CP050150|CRISPRCasFinder matches to NC_015062 (Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequence) position: , mismatch: 3, identity: 0.889

aactcctccccctgcgaaggggaggct	CRISPR spacer
aactccctcccctgcgaaggggagggt	Protospacer
******..***************** *

5. spacer 5.1|4179424|27|NZ_CP050150|CRISPRCasFinder matches to NZ_CP034838 (Rahnella aquatilis strain KM12 plasmid pKM12v1, complete sequence) position: , mismatch: 3, identity: 0.889

aactcctccccctgcgaaggggaggct	CRISPR spacer
aactccctcccctgcgaaggggagggt	Protospacer
******..***************** *

6. spacer 5.1|4179424|27|NZ_CP050150|CRISPRCasFinder matches to NZ_CP034838 (Rahnella aquatilis strain KM12 plasmid pKM12v1, complete sequence) position: , mismatch: 3, identity: 0.889

aactcctccccctgcgaaggggaggct	CRISPR spacer
aacgccttcccctgcgaaggggagggt	Protospacer
*** ***.***************** *

7. spacer 5.1|4179424|27|NZ_CP050150|CRISPRCasFinder matches to NZ_CP034839 (Rahnella aquatilis strain KM25 plasmid pKM12v2, complete sequence) position: , mismatch: 3, identity: 0.889

aactcctccccctgcgaaggggaggct	CRISPR spacer
aactccctcccctgcgaaggggagggt	Protospacer
******..***************** *

8. spacer 5.1|4179424|27|NZ_CP050150|CRISPRCasFinder matches to NZ_CP034839 (Rahnella aquatilis strain KM25 plasmid pKM12v2, complete sequence) position: , mismatch: 3, identity: 0.889

aactcctccccctgcgaaggggaggct	CRISPR spacer
aacgccttcccctgcgaaggggagggt	Protospacer
*** ***.***************** *

9. spacer 5.1|4179424|27|NZ_CP050150|CRISPRCasFinder matches to NZ_CP034837 (Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence) position: , mismatch: 3, identity: 0.889

aactcctccccctgcgaaggggaggct	CRISPR spacer
aactccctcccctgcgaaggggagggt	Protospacer
******..***************** *

10. spacer 5.1|4179424|27|NZ_CP050150|CRISPRCasFinder matches to NZ_CP036488 (Rahnella aquatilis strain MEM40 plasmid pMEM40-1, complete sequence) position: , mismatch: 4, identity: 0.852

aactcctccccctgcgaaggggaggct	CRISPR spacer
agctccctcccctgcgaaggggagggt	Protospacer
*.****..***************** *

11. spacer 5.1|4179424|27|NZ_CP050150|CRISPRCasFinder matches to NZ_CP022366 (Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence) position: , mismatch: 4, identity: 0.852

aactcctccccctgcgaaggggaggct	CRISPR spacer
aactcctccccctgcgaagcgggggga	Protospacer
******************* **.**

12. spacer 5.1|4179424|27|NZ_CP050150|CRISPRCasFinder matches to NZ_CP032297 (Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence) position: , mismatch: 4, identity: 0.852

aactcctccccctgcgaaggggaggct	CRISPR spacer
agctccctcccctgcgaaggggagggt	Protospacer
*.****..***************** *

13. spacer 5.1|4179424|27|NZ_CP050150|CRISPRCasFinder matches to NZ_CP032297 (Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence) position: , mismatch: 4, identity: 0.852

aactcctccccctgcgaaggggaggct	CRISPR spacer
aacgccttcccctgcgaaggggaaggt	Protospacer
*** ***.***************.* *

14. spacer 5.1|4179424|27|NZ_CP050150|CRISPRCasFinder matches to NC_017060 (Rahnella aquatilis HX2 plasmid PRA1, complete sequence) position: , mismatch: 4, identity: 0.852

aactcctccccctgcgaaggggaggct	CRISPR spacer
agctccctcccctgcgaaggggagggt	Protospacer
*.****..***************** *

15. spacer 5.1|4179424|27|NZ_CP050150|CRISPRCasFinder matches to NC_015062 (Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequence) position: , mismatch: 4, identity: 0.852

aactcctccccctgcgaaggggaggct	CRISPR spacer
aacgccttcccctgcgaaggggaaggt	Protospacer
*** ***.***************.* *

16. spacer 5.1|4179424|27|NZ_CP050150|CRISPRCasFinder matches to NZ_CP034838 (Rahnella aquatilis strain KM12 plasmid pKM12v1, complete sequence) position: , mismatch: 4, identity: 0.852

aactcctccccctgcgaaggggaggct	CRISPR spacer
agctccctcccctgcgaaggggagggt	Protospacer
*.****..***************** *

17. spacer 5.1|4179424|27|NZ_CP050150|CRISPRCasFinder matches to NZ_CP034839 (Rahnella aquatilis strain KM25 plasmid pKM12v2, complete sequence) position: , mismatch: 4, identity: 0.852

aactcctccccctgcgaaggggaggct	CRISPR spacer
agctccctcccctgcgaaggggagggt	Protospacer
*.****..***************** *

18. spacer 5.1|4179424|27|NZ_CP050150|CRISPRCasFinder matches to NZ_CP034837 (Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence) position: , mismatch: 4, identity: 0.852

aactcctccccctgcgaaggggaggct	CRISPR spacer
aacgccttcccctgcgaaggggaaggt	Protospacer
*** ***.***************.* *

19. spacer 5.1|4179424|27|NZ_CP050150|CRISPRCasFinder matches to NZ_CP034837 (Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence) position: , mismatch: 4, identity: 0.852

aactcctccccctgcgaaggggaggct	CRISPR spacer
agctccctcccctgcgaaggggagggt	Protospacer
*.****..***************** *

20. spacer 3.10|2954107|32|NZ_CP050150|PILER-CR,CRISPRCasFinder,CRT matches to MN855766 (Bacteriophage sp. isolate 10, complete genome) position: , mismatch: 5, identity: 0.844

atctatcaacatttgacgcggtattcgctgtg	CRISPR spacer
gtgccccaacatttgacgcggtattcgctgtg	Protospacer
.* . .**************************

21. spacer 5.1|4179424|27|NZ_CP050150|CRISPRCasFinder matches to NZ_CP036488 (Rahnella aquatilis strain MEM40 plasmid pMEM40-1, complete sequence) position: , mismatch: 5, identity: 0.815

aactcctccccctgcgaaggggaggct	CRISPR spacer
tgctcctccccctgcgaagggggaggt	Protospacer
 .********************..* *

22. spacer 5.1|4179424|27|NZ_CP050150|CRISPRCasFinder matches to NZ_CP036488 (Rahnella aquatilis strain MEM40 plasmid pMEM40-1, complete sequence) position: , mismatch: 5, identity: 0.815

aactcctccccctgcgaaggggaggct	CRISPR spacer
ggctccctcccctgcgaaggggagggt	Protospacer
..****..***************** *

23. spacer 5.1|4179424|27|NZ_CP050150|CRISPRCasFinder matches to NZ_CP032297 (Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence) position: , mismatch: 5, identity: 0.815

aactcctccccctgcgaaggggaggct	CRISPR spacer
tgctcctccccctgcgaagggggaggt	Protospacer
 .********************..* *

24. spacer 5.1|4179424|27|NZ_CP050150|CRISPRCasFinder matches to NZ_CP032297 (Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence) position: , mismatch: 5, identity: 0.815

aactcctccccctgcgaaggggaggct	CRISPR spacer
agctccctcccctgcgaaggggagggc	Protospacer
*.****..***************** .

25. spacer 5.1|4179424|27|NZ_CP050150|CRISPRCasFinder matches to NZ_CP032297 (Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence) position: , mismatch: 5, identity: 0.815

aactcctccccctgcgaaggggaggct	CRISPR spacer
ggctccctcccctgcgaaggggagggt	Protospacer
..****..***************** *

26. spacer 5.1|4179424|27|NZ_CP050150|CRISPRCasFinder matches to NC_017060 (Rahnella aquatilis HX2 plasmid PRA1, complete sequence) position: , mismatch: 5, identity: 0.815

aactcctccccctgcgaaggggaggct	CRISPR spacer
tgctcctccccctgcgaagggggaggt	Protospacer
 .********************..* *

27. spacer 5.1|4179424|27|NZ_CP050150|CRISPRCasFinder matches to NC_017060 (Rahnella aquatilis HX2 plasmid PRA1, complete sequence) position: , mismatch: 5, identity: 0.815

aactcctccccctgcgaaggggaggct	CRISPR spacer
ggctccctcccctgcgaaggggagggt	Protospacer
..****..***************** *

28. spacer 5.1|4179424|27|NZ_CP050150|CRISPRCasFinder matches to NC_015062 (Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequence) position: , mismatch: 5, identity: 0.815

aactcctccccctgcgaaggggaggct	CRISPR spacer
ggctccctcccctgcgaaggggagggt	Protospacer
..****..***************** *

29. spacer 5.1|4179424|27|NZ_CP050150|CRISPRCasFinder matches to NZ_CP034838 (Rahnella aquatilis strain KM12 plasmid pKM12v1, complete sequence) position: , mismatch: 5, identity: 0.815

aactcctccccctgcgaaggggaggct	CRISPR spacer
tgctcctccccctgcgaagggggaggt	Protospacer
 .********************..* *

30. spacer 5.1|4179424|27|NZ_CP050150|CRISPRCasFinder matches to NZ_CP034838 (Rahnella aquatilis strain KM12 plasmid pKM12v1, complete sequence) position: , mismatch: 5, identity: 0.815

aactcctccccctgcgaaggggaggct	CRISPR spacer
ggctccctcccctgcgaaggggagggt	Protospacer
..****..***************** *

31. spacer 5.1|4179424|27|NZ_CP050150|CRISPRCasFinder matches to NZ_CP034838 (Rahnella aquatilis strain KM12 plasmid pKM12v1, complete sequence) position: , mismatch: 5, identity: 0.815

aactcctccccctgcgaaggggaggct	CRISPR spacer
tgctccctcccctgcgaaggggagggt	Protospacer
 .****..***************** *

32. spacer 5.1|4179424|27|NZ_CP050150|CRISPRCasFinder matches to NZ_CP034839 (Rahnella aquatilis strain KM25 plasmid pKM12v2, complete sequence) position: , mismatch: 5, identity: 0.815

aactcctccccctgcgaaggggaggct	CRISPR spacer
tgctcctccccctgcgaagggggaggt	Protospacer
 .********************..* *

33. spacer 5.1|4179424|27|NZ_CP050150|CRISPRCasFinder matches to NZ_CP034839 (Rahnella aquatilis strain KM25 plasmid pKM12v2, complete sequence) position: , mismatch: 5, identity: 0.815

aactcctccccctgcgaaggggaggct	CRISPR spacer
ggctccctcccctgcgaaggggagggt	Protospacer
..****..***************** *

34. spacer 5.1|4179424|27|NZ_CP050150|CRISPRCasFinder matches to NZ_CP034839 (Rahnella aquatilis strain KM25 plasmid pKM12v2, complete sequence) position: , mismatch: 5, identity: 0.815

aactcctccccctgcgaaggggaggct	CRISPR spacer
tgctccctcccctgcgaaggggagggt	Protospacer
 .****..***************** *

35. spacer 5.1|4179424|27|NZ_CP050150|CRISPRCasFinder matches to NZ_CP034837 (Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence) position: , mismatch: 5, identity: 0.815

aactcctccccctgcgaaggggaggct	CRISPR spacer
tgctcctccccctgcgaagggggaggt	Protospacer
 .********************..* *

36. spacer 5.1|4179424|27|NZ_CP050150|CRISPRCasFinder matches to NZ_CP034837 (Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence) position: , mismatch: 5, identity: 0.815

aactcctccccctgcgaaggggaggct	CRISPR spacer
ggctccctcccctgcgaaggggagggt	Protospacer
..****..***************** *

37. spacer 5.1|4179424|27|NZ_CP050150|CRISPRCasFinder matches to NZ_CP034837 (Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence) position: , mismatch: 5, identity: 0.815

aactcctccccctgcgaaggggaggct	CRISPR spacer
agctccctcccctgcgaaggggagggc	Protospacer
*.****..***************** .

38. spacer 5.1|4179424|27|NZ_CP050150|CRISPRCasFinder matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 5, identity: 0.815

aactcctccccctgcgaaggggaggct	CRISPR spacer
atctcctccccctgcgaagcgggggga	Protospacer
* ***************** **.**

39. spacer 5.1|4179424|27|NZ_CP050150|CRISPRCasFinder matches to NZ_CP007797 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p4, complete sequence) position: , mismatch: 5, identity: 0.815

aactcctccccctgcgaaggggaggct	CRISPR spacer
atctcctccccctgcgaagcgggggga	Protospacer
* ***************** **.**

40. spacer 5.1|4179424|27|NZ_CP050150|CRISPRCasFinder matches to NZ_CP032340 (Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence) position: , mismatch: 5, identity: 0.815

aactcctccccctgcgaaggggaggct	CRISPR spacer
atctcctccccctgcgaagcgggggga	Protospacer
* ***************** **.**

41. spacer 5.1|4179424|27|NZ_CP050150|CRISPRCasFinder matches to NZ_CP012915 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence) position: , mismatch: 5, identity: 0.815

aactcctccccctgcgaaggggaggct	CRISPR spacer
atctcctccccctgcgaagcgggggga	Protospacer
* ***************** **.**

42. spacer 5.1|4179424|27|NZ_CP050150|CRISPRCasFinder matches to NZ_CP036488 (Rahnella aquatilis strain MEM40 plasmid pMEM40-1, complete sequence) position: , mismatch: 6, identity: 0.778

aactcctccccctgcgaaggggaggct	CRISPR spacer
tgctcctccccctgcgaagggggaggc	Protospacer
 .********************..* .

43. spacer 5.1|4179424|27|NZ_CP050150|CRISPRCasFinder matches to NZ_CP036488 (Rahnella aquatilis strain MEM40 plasmid pMEM40-1, complete sequence) position: , mismatch: 6, identity: 0.778

aactcctccccctgcgaaggggaggct	CRISPR spacer
tgctcctccccctgcgaagggggaggc	Protospacer
 .********************..* .

44. spacer 5.1|4179424|27|NZ_CP050150|CRISPRCasFinder matches to NZ_CP032297 (Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence) position: , mismatch: 6, identity: 0.778

aactcctccccctgcgaaggggaggct	CRISPR spacer
ggctcctccccctgcgaagggggaggc	Protospacer
..********************..* .

45. spacer 5.1|4179424|27|NZ_CP050150|CRISPRCasFinder matches to NZ_CP032297 (Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence) position: , mismatch: 6, identity: 0.778

aactcctccccctgcgaaggggaggct	CRISPR spacer
tgctcctccccctgcgaagggggaggc	Protospacer
 .********************..* .

46. spacer 5.1|4179424|27|NZ_CP050150|CRISPRCasFinder matches to NZ_CP032297 (Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence) position: , mismatch: 6, identity: 0.778

aactcctccccctgcgaaggggaggct	CRISPR spacer
tgctcctccccctgcgaagggggaggc	Protospacer
 .********************..* .

47. spacer 5.1|4179424|27|NZ_CP050150|CRISPRCasFinder matches to NZ_CP032297 (Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence) position: , mismatch: 6, identity: 0.778

aactcctccccctgcgaaggggaggct	CRISPR spacer
tgctcctcaccctgcgaaggggtggga	Protospacer
 .****** ************* **

48. spacer 5.1|4179424|27|NZ_CP050150|CRISPRCasFinder matches to NC_017060 (Rahnella aquatilis HX2 plasmid PRA1, complete sequence) position: , mismatch: 6, identity: 0.778

aactcctccccctgcgaaggggaggct	CRISPR spacer
tgctcctccccctgcgaagggggaggc	Protospacer
 .********************..* .

49. spacer 5.1|4179424|27|NZ_CP050150|CRISPRCasFinder matches to NC_017060 (Rahnella aquatilis HX2 plasmid PRA1, complete sequence) position: , mismatch: 6, identity: 0.778

aactcctccccctgcgaaggggaggct	CRISPR spacer
tgctcctccccctgcgaagggggaggc	Protospacer
 .********************..* .

50. spacer 5.1|4179424|27|NZ_CP050150|CRISPRCasFinder matches to NC_015062 (Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequence) position: , mismatch: 6, identity: 0.778

aactcctccccctgcgaaggggaggct	CRISPR spacer
tgctcctccccctgcgaagggggaggc	Protospacer
 .********************..* .

51. spacer 5.1|4179424|27|NZ_CP050150|CRISPRCasFinder matches to NC_015062 (Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequence) position: , mismatch: 6, identity: 0.778

aactcctccccctgcgaaggggaggct	CRISPR spacer
tgctcctccccctgcgaagggggaggc	Protospacer
 .********************..* .

52. spacer 5.1|4179424|27|NZ_CP050150|CRISPRCasFinder matches to NZ_CP034838 (Rahnella aquatilis strain KM12 plasmid pKM12v1, complete sequence) position: , mismatch: 6, identity: 0.778

aactcctccccctgcgaaggggaggct	CRISPR spacer
tgctcctccccctgcgaagggggaggc	Protospacer
 .********************..* .

53. spacer 5.1|4179424|27|NZ_CP050150|CRISPRCasFinder matches to NZ_CP034838 (Rahnella aquatilis strain KM12 plasmid pKM12v1, complete sequence) position: , mismatch: 6, identity: 0.778

aactcctccccctgcgaaggggaggct	CRISPR spacer
tgctcctccccctgcgaagggggaggc	Protospacer
 .********************..* .

54. spacer 5.1|4179424|27|NZ_CP050150|CRISPRCasFinder matches to NZ_CP034839 (Rahnella aquatilis strain KM25 plasmid pKM12v2, complete sequence) position: , mismatch: 6, identity: 0.778

aactcctccccctgcgaaggggaggct	CRISPR spacer
tgctcctccccctgcgaagggggaggc	Protospacer
 .********************..* .

55. spacer 5.1|4179424|27|NZ_CP050150|CRISPRCasFinder matches to NZ_CP034839 (Rahnella aquatilis strain KM25 plasmid pKM12v2, complete sequence) position: , mismatch: 6, identity: 0.778

aactcctccccctgcgaaggggaggct	CRISPR spacer
tgctcctccccctgcgaagggggaggc	Protospacer
 .********************..* .

56. spacer 5.1|4179424|27|NZ_CP050150|CRISPRCasFinder matches to NZ_CP034837 (Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence) position: , mismatch: 6, identity: 0.778

aactcctccccctgcgaaggggaggct	CRISPR spacer
tgctcctccccctgcgaagggggaggc	Protospacer
 .********************..* .

57. spacer 5.1|4179424|27|NZ_CP050150|CRISPRCasFinder matches to NZ_CP034837 (Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence) position: , mismatch: 6, identity: 0.778

aactcctccccctgcgaaggggaggct	CRISPR spacer
tgctcctccccctgcgaagggggaggc	Protospacer
 .********************..* .

58. spacer 5.1|4179424|27|NZ_CP050150|CRISPRCasFinder matches to NZ_CP034837 (Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence) position: , mismatch: 6, identity: 0.778

aactcctccccctgcgaaggggaggct	CRISPR spacer
ggctcctccccctgcgaagggggaggc	Protospacer
..********************..* .

59. spacer 5.1|4179424|27|NZ_CP050150|CRISPRCasFinder matches to NZ_CP034837 (Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence) position: , mismatch: 6, identity: 0.778

aactcctccccctgcgaaggggaggct	CRISPR spacer
tgctcctcaccctgcgaaggggtggga	Protospacer
 .****** ************* **

60. spacer 5.1|4179424|27|NZ_CP050150|CRISPRCasFinder matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 6, identity: 0.778

aactcctccccctgcgaaggggaggct	CRISPR spacer
ttctcctccccctgcgaagcgggggga	Protospacer
  ***************** **.**

61. spacer 5.1|4179424|27|NZ_CP050150|CRISPRCasFinder matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 6, identity: 0.778

aactcctccccctgcgaaggggaggct	CRISPR spacer
ttctcctccccctgcgaagcgggggag	Protospacer
  ***************** **.**

62. spacer 5.1|4179424|27|NZ_CP050150|CRISPRCasFinder matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 6, identity: 0.778

aactcctccccctgcgaaggggaggct	CRISPR spacer
ttctcctccccctgcgaagcgggggga	Protospacer
  ***************** **.**

63. spacer 5.1|4179424|27|NZ_CP050150|CRISPRCasFinder matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 6, identity: 0.778

aactcctccccctgcgaaggggaggct	CRISPR spacer
ttctcctccccctgcgaagcgggggga	Protospacer
  ***************** **.**

64. spacer 3.2|2953627|32|NZ_CP050150|PILER-CR,CRISPRCasFinder,CRT matches to AP014720 (Arthrobacter sp. Hiyo8 plasmid pHiyo8-1 DNA, complete genome, strain: Hiyo8) position: , mismatch: 7, identity: 0.781

cgtcatc--ggatcgcagcaaagtctttgttgaa	CRISPR spacer
--tcaccgtggaccgcggcaaagtctttgttggg	Protospacer
  ***.*  ***.***.***************..

65. spacer 3.10|2954107|32|NZ_CP050150|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054047 (Yersinia massiliensis strain 2011N-4075 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

atctatcaacatttgacgcggtattcgctgtg	CRISPR spacer
atgcctcaacatctgacgcggtattcgttggt	Protospacer
** . *******.**************.**

66. spacer 2.7|2883100|32|NZ_CP050150|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026653 (Streptomyces dengpaensis strain XZHG99 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ctagcactggcgcggctactgttgctgttact	CRISPR spacer
catgatctggcgcggctgctgttgatgttccg	Protospacer
*  *  ***********.****** **** *

67. spacer 3.14|2954347|32|NZ_CP050150|PILER-CR,CRISPRCasFinder,CRT matches to NC_048720 (Streptomyces phage Blueeyedbeauty, complete genome) position: , mismatch: 8, identity: 0.75

atgtccgcaggtatcgagaatccagaaatggt	CRISPR spacer
cgatacaaaggtatcgagattccaggaatggt	Protospacer
  .* *. *********** *****.******

68. spacer 2.7|2883100|32|NZ_CP050150|CRISPRCasFinder,CRT,PILER-CR matches to LN713927 (Pseudomonas fluorescens SBW25 plasmid pQBR55, complete sequence) position: , mismatch: 9, identity: 0.719

ctagcactggcgcggctactgttgctgttact	CRISPR spacer
agctcactggcgcggcaactgttgctgccgcc	Protospacer
    ************ **********...*.

69. spacer 3.7|2953927|32|NZ_CP050150|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP004389 (Thalassospira xiamenensis M-5 = DSM 17429 strain M-5 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ggcaagggatggattcacgcttaactaggctc	CRISPR spacer
ggcaagggagggattcatgcttaaacttattg	Protospacer
********* *******.****** .  ..*

70. spacer 3.9|2954047|32|NZ_CP050150|PILER-CR,CRISPRCasFinder,CRT matches to AP022644 (Bacillus wiedmannii PL1 plasmid pBwiPL1-1 DNA, complete sequence) position: , mismatch: 9, identity: 0.719

gtaaataatatgagcgcttataaaagccgaaa	CRISPR spacer
aaaaacaatatgagcgcttacaaaacgttaat	Protospacer
. ***.**************.****  . **

71. spacer 3.9|2954047|32|NZ_CP050150|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013276 (Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-1-360K, complete sequence) position: , mismatch: 9, identity: 0.719

gtaaataatatgagcgcttataaaagccgaaa	CRISPR spacer
aaaaatgatatgagcgcttacaaaacgttaat	Protospacer
. ****.*************.****  . **

72. spacer 3.9|2954047|32|NZ_CP050150|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039722 (Bacillus thuringiensis strain BT-59 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.719

gtaaataatatgagcgcttataaaagccgaaa	CRISPR spacer
aaaaatgatatgagcgcttacaaaacgttaat	Protospacer
. ****.*************.****  . **

73. spacer 3.9|2954047|32|NZ_CP050150|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009349 (Bacillus thuringiensis HD1002 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.719

gtaaataatatgagcgcttataaaagccgaaa	CRISPR spacer
aaaaatgatatgagcgcttacaaaacgttaat	Protospacer
. ****.*************.****  . **

74. spacer 3.9|2954047|32|NZ_CP050150|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045023 (Bacillus thuringiensis strain JW-1 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.719

gtaaataatatgagcgcttataaaagccgaaa	CRISPR spacer
aaaaatgatatgagcgcttacaaaacgttaat	Protospacer
. ****.*************.****  . **

75. spacer 3.9|2954047|32|NZ_CP050150|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018741 (Bacillus cereus strain FORC_047 plasmid pFORC47_1, complete sequence) position: , mismatch: 9, identity: 0.719

gtaaataatatgagcgcttataaaagccgaaa	CRISPR spacer
aaaaatgatatgagcgcttacaaaacgttaat	Protospacer
. ****.*************.****  . **

76. spacer 3.2|2953627|32|NZ_CP050150|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009266 (Vibrio coralliilyticus strain OCN014 plasmid pOCN014, complete sequence) position: , mismatch: 10, identity: 0.688

cgtcatcggatcgcagcaaagtctttgttgaa	CRISPR spacer
gaaattcgggtcgcagcatagtctttgtcgtt	Protospacer
 .   ****.******** *********.*

77. spacer 3.14|2954347|32|NZ_CP050150|PILER-CR,CRISPRCasFinder,CRT matches to MF417907 (Uncultured Caudovirales phage clone 7F_7, partial genome) position: , mismatch: 10, identity: 0.688

atgtccgcaggtatcgagaatccagaaatggt	CRISPR spacer
agtaatagaggtatcgagaataaagaaatgga	Protospacer
*    .. *************  ********

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

820634 : 830781

uncultured_Mediterranean_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_025801558.1\|820634_821396_+	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	2.9e-66	50.8
WP_166492795.1\|821389_822022_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	1.5e-36	51.5
WP_166492796.1\|822429_823410_+	murein hydrolase activator NlpD	D7RWE0	Brochothrix_phage	1.6e-05	35.2
WP_025801555.1\|823462_824449_+	RNA polymerase sigma factor RpoS	G8CLC7	Synechococcus_phage	1.0e-31	37.0
WP_166492797.1\|824523_827082_-	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	5.8e-26	20.6
WP_166492798.1\|827346_830781_-	autotransporter outer membrane beta-barrel domain-containing protein	A0A2L1IV18	Escherichia_phage	1.8e-99	54.5

DBSCAN-SWA_2

1010586 : 1048299

Enterobacteria_phage(19.44%)

portal,holin,head,terminase,capsid,tail,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_166492841.1\|1010586_1012095_+	diguanylate cyclase	A0A127AWB9	Bacillus_phage	4.2e-08	30.6
WP_166492842.1\|1012539_1013721_-	DUF3596 domain-containing protein	I6PDJ1	Cronobacter_phage	3.0e-155	69.0
WP_130934786.1\|1013941_1014559_-	3'-5' exoribonuclease	A0A0H4IPM9	Stenotrophomonas_phage	3.1e-18	32.3
WP_130934785.1\|1014551_1014875_-	hypothetical protein	A0A222YY67	Escherichia_phage	5.4e-30	58.8
WP_166492843.1\|1014867_1015272_-	hypothetical protein	NA	NA	NA	NA
WP_166493783.1\|1015268_1015730_-	HD family hydrolase	A0A1W6JP41	Morganella_phage	7.6e-38	55.0
WP_072309948.1\|1016784_1017156_-	hypothetical protein	Q8HAA1	Salmonella_phage	7.7e-49	79.2
WP_166492844.1\|1017610_1018249_-	LexA family transcriptional regulator	A5VW98	Enterobacteria_phage	6.9e-37	43.3
WP_166492845.1\|1018353_1018557_+	hypothetical protein	A0A1W6JP24	Morganella_phage	3.9e-10	54.4
WP_046360424.1\|1018581_1019124_+	hypothetical protein	A0A0P0ZE62	Stx2-converting_phage	1.3e-15	31.5
WP_166492846.1\|1019120_1019300_+	hypothetical protein	NA	NA	NA	NA
WP_166493784.1\|1020411_1020963_+	hypothetical protein	A0A1C9IHW0	Salmonella_phage	1.6e-26	52.8
WP_166492847.1\|1020965_1021235_+	hypothetical protein	NA	NA	NA	NA
WP_166492848.1\|1021231_1021879_+	DNA methyltransferase	I6PDF5	Cronobacter_phage	2.2e-75	64.4
WP_166492849.1\|1021869_1022880_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	1.6e-80	44.6
WP_166492850.1\|1022900_1023596_+	hypothetical protein	A0A1W6JP37	Morganella_phage	3.2e-40	41.2
WP_166492851.1\|1023726_1024500_+	hypothetical protein	NA	NA	NA	NA
WP_130975663.1\|1024646_1025015_+	hypothetical protein	A0A1S5NRL1	Burkholderia_phage	5.6e-15	47.2
WP_095661683.1\|1025011_1025290_+\|holin	phage holin family protein	G9L6E7	Escherichia_phage	1.5e-09	39.8
WP_166492852.1\|1025289_1025904_+	glycoside hydrolase family 19 protein	A0A192Y6G4	Salmonella_phage	1.2e-91	85.4
WP_166492853.1\|1025900_1026110_+	hypothetical protein	NA	NA	NA	NA
WP_166492854.1\|1026106_1026634_+	DUF2514 family protein	NA	NA	NA	NA
WP_166492855.1\|1026712_1027156_+	hypothetical protein	NA	NA	NA	NA
WP_166492856.1\|1027274_1027625_+	HNH endonuclease	A0A1W6JP27	Morganella_phage	3.3e-49	74.1
WP_130986803.1\|1027832_1028306_+\|terminase	phage terminase small subunit P27 family	K7PHI2	Enterobacteria_phage	1.2e-67	77.1
WP_166492857.1\|1028306_1030043_+\|terminase	terminase large subunit	K7PKT2	Enterobacteria_phage	3.4e-304	88.4
WP_166492858.1\|1030250_1031489_+\|portal	phage portal protein	U5P411	Shigella_phage	2.4e-179	73.1
WP_025797691.1\|1031463_1032126_+\|head,protease	HK97 family phage prohead protease	U5P4H2	Shigella_phage	8.3e-94	78.9
WP_166492859.1\|1032130_1033348_+\|capsid	phage major capsid protein	M1FPN2	Enterobacteria_phage	1.3e-161	70.8
WP_149226282.1\|1033386_1033698_+\|head,tail	phage gp6-like head-tail connector protein	K7PKT4	Enterobacteria_phage	1.0e-14	44.6
WP_166492860.1\|1033694_1034039_+\|head	phage head closure protein	Q7Y406	Yersinia_phage	2.6e-30	60.7
WP_130998371.1\|1034019_1034409_+	hypothetical protein	Q7Y405	Yersinia_phage	1.4e-29	46.8
WP_166492861.1\|1034405_1034813_+	hypothetical protein	Q6UAX1	Klebsiella_phage	6.5e-41	66.9
WP_130986786.1\|1034848_1035307_+\|tail	phage tail protein	Q6UAX0	Klebsiella_phage	2.4e-60	78.5
WP_130986784.1\|1035282_1035567_+	immunoglobulin domain-containing protein	Q7Y402	Yersinia_phage	1.1e-15	52.1
WP_166492862.1\|1035620_1035983_+\|tail	phage tail protein	Q6UAW8	Klebsiella_phage	4.8e-27	53.0
WP_166492863.1\|1036221_1039560_+\|tail	phage tail tape measure protein	Q6UAW7	Klebsiella_phage	0.0e+00	67.9
WP_166492864.1\|1039559_1039898_+\|tail	phage tail protein	K7P7R1	Enterobacteria_phage	2.0e-43	70.5
WP_166492865.1\|1039894_1040644_+\|tail	phage minor tail protein L	K7P7D8	Enterobacteria_phage	1.4e-100	70.2
WP_166492866.1\|1040645_1041359_+	peptidase P60	Q9MCU3	Escherichia_phage	2.8e-111	76.7
WP_166492867.1\|1041401_1041764_+	hypothetical protein	NA	NA	NA	NA
WP_166492868.1\|1041818_1042454_+\|tail	tail assembly protein	F1C572	Cronobacter_phage	9.5e-47	51.2
WP_166492869.1\|1042504_1046008_+\|tail	phage tail protein	F1C571	Cronobacter_phage	0.0e+00	51.8
WP_166492870.1\|1046307_1046961_+	hypothetical protein	NA	NA	NA	NA
WP_166493785.1\|1047315_1048299_+\|tail	tail fiber domain-containing protein	A0A2I6PD00	Escherichia_phage	1.6e-48	53.6

DBSCAN-SWA_3

1554753 : 1629155

Salmonella_phage(47.92%)

plate,portal,head,terminase,integrase,capsid,tail,lysis,protease

attL 1554664:1554683|attR 1590340:1590359

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1554664:1554683	attL	NA	NA	NA	NA
WP_166492976.1\|1554753_1555812_-\|integrase	tyrosine-type recombinase/integrase	A0A0M4S6G4	Salmonella_phage	5.7e-113	57.1
WP_166492977.1\|1555897_1556941_-	hypothetical protein	NA	NA	NA	NA
WP_166492978.1\|1557004_1557187_-	hypothetical protein	A0A0R6PIB1	Moraxella_phage	1.9e-08	52.6
WP_166492979.1\|1557204_1557774_-	phage repressor protein	A0A1S6KZZ7	Salmonella_phage	1.5e-38	41.2
WP_166492980.1\|1557918_1558140_+	regulator	NA	NA	NA	NA
WP_166492981.1\|1558186_1558702_+	phage regulatory CII family protein	A0A1S6L008	Salmonella_phage	3.2e-45	52.9
WP_166492982.1\|1558709_1558907_+	DUF2724 domain-containing protein	A0A218M4I1	Erwinia_phage	1.9e-09	46.8
WP_166492983.1\|1558870_1559212_+	DUF5347 domain-containing protein	A0A218M4I7	Erwinia_phage	8.2e-29	58.4
WP_166492984.1\|1559279_1559504_+	DUF2732 domain-containing protein	E5G6L6	Salmonella_phage	3.0e-11	53.2
WP_166492985.1\|1559503_1559731_+	TraR/DksA family transcriptional regulator	A0A218M4I6	Erwinia_phage	2.1e-17	58.3
WP_166492986.1\|1559727_1559982_+	hypothetical protein	NA	NA	NA	NA
WP_131019524.1\|1560015_1560288_-	hypothetical protein	NA	NA	NA	NA
WP_166492987.1\|1560379_1562839_+	replication endonuclease	F1BUS0	Erwinia_phage	2.3e-234	54.7
WP_130994163.1\|1563000_1563198_+	hypothetical protein	NA	NA	NA	NA
WP_166492988.1\|1564035_1564506_+	GNAT family N-acetyltransferase	Q6SE88	Lactobacillus_prophage	7.1e-23	40.0
WP_166492989.1\|1564506_1565088_+	hypothetical protein	NA	NA	NA	NA
WP_060855053.1\|1565065_1565437_+	ASCH domain-containing protein	Q6SE87	Lactobacillus_prophage	1.1e-29	48.4
WP_166492990.1\|1565446_1565983_-	AAA family ATPase	NA	NA	NA	NA
WP_166492991.1\|1566006_1566426_+	ASCH domain-containing protein	NA	NA	NA	NA
WP_166492992.1\|1566436_1567213_+	hypothetical protein	NA	NA	NA	NA
WP_166492993.1\|1567698_1568070_-	hypothetical protein	B2ZY70	Ralstonia_phage	4.1e-18	54.0
WP_166492994.1\|1568088_1569150_-\|portal	phage portal protein	E5G6M3	Salmonella_phage	8.5e-157	81.3
WP_166492995.1\|1569153_1570926_-\|terminase	terminase ATPase subunit family protein	A0A1S6KZW3	Salmonella_phage	1.1e-302	84.4
WP_166492996.1\|1571068_1571896_+\|capsid	GPO family capsid scaffolding protein	A0A1S6KZW9	Salmonella_phage	4.1e-74	55.6
WP_166492997.1\|1571911_1573177_+\|capsid	phage major capsid protein, P2 family	E5G6M6	Salmonella_phage	8.5e-156	78.1
WP_130994154.1\|1573180_1573840_+\|terminase	terminase endonuclease subunit	F1BUQ7	Erwinia_phage	9.5e-58	55.7
WP_130994153.1\|1573935_1574400_+\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	2.4e-39	51.9
WP_166492998.1\|1574399_1574603_+\|tail	phage tail protein	E5G6M9	Salmonella_phage	3.6e-24	73.1
WP_046358755.1\|1574606_1574822_+	hypothetical protein	E5G6N0	Salmonella_phage	4.5e-09	38.0
WP_166492999.1\|1574802_1575315_+	lysozyme	A0A218M4K3	Erwinia_phage	6.0e-60	70.1
WP_166493000.1\|1575314_1575740_+\|lysis	LysB family phage lysis regulatory protein	A0A1S6KZX8	Salmonella_phage	4.3e-27	46.8
WP_166493001.1\|1575835_1576264_+\|tail	phage tail protein	E5G6N3	Salmonella_phage	5.4e-38	56.5
WP_166493002.1\|1576260_1576710_+	phage virion morphogenesis protein	E5G6N4	Salmonella_phage	6.5e-26	49.6
WP_166493003.1\|1577071_1577560_-	hypothetical protein	NA	NA	NA	NA
WP_166493004.1\|1577644_1578535_-	DUF2971 domain-containing protein	NA	NA	NA	NA
WP_166493005.1\|1578672_1579266_+\|plate	phage baseplate assembly protein V	Q6K1H6	Salmonella_virus	2.4e-52	53.1
WP_130984900.1\|1579262_1579610_+\|plate	baseplate assembly protein	A0A1S6KZZ4	Salmonella_phage	2.0e-30	58.2
WP_166493006.1\|1579609_1580518_+\|plate	baseplate assembly protein	A0A1S6KZY6	Salmonella_phage	5.1e-110	67.9
WP_130987020.1\|1580510_1581050_+\|tail	phage tail protein I	U5N0U8	Enterobacteria_phage	9.8e-69	68.6
WP_166493007.1\|1582788_1583328_+\|tail	tail fiber assembly protein	A0A0F7LBP0	Escherichia_phage	5.0e-57	62.1
WP_131000482.1\|1583429_1584602_+\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	1.3e-182	80.5
WP_166493008.1\|1584620_1585136_+\|tail	phage major tail tube protein	A0A1S6L002	Salmonella_phage	4.4e-66	70.8
WP_130987030.1\|1585190_1585544_+\|tail	phage tail assembly protein	E5G6P9	Salmonella_phage	7.4e-25	63.9
WP_070715247.1\|1585558_1585678_+\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	1.3e-10	74.4
WP_166493009.1\|1585670_1588349_+\|tail	phage tail tape measure protein	A0A1S6L010	Salmonella_phage	9.8e-186	45.5
WP_166493010.1\|1588348_1588813_+\|tail	phage tail protein	E5G6Q2	Salmonella_phage	9.7e-49	65.1
WP_166493011.1\|1588809_1589910_+	phage late control D family protein	E5G6Q3	Salmonella_phage	2.3e-125	65.0
WP_046358737.1\|1589979_1590195_+	late control protein B	Q53ZE7	Salmonella_virus	6.3e-19	65.3
WP_043492486.1\|1590518_1592207_-	aspartate:alanine antiporter	NA	NA	NA	NA
1590340:1590359	attR	NA	NA	NA	NA
WP_025800909.1\|1592538_1592931_+	hypothetical protein	NA	NA	NA	NA
WP_004095905.1\|1593004_1593268_-	GrxA family glutaredoxin	A0A2I7SAE2	Vibrio_phage	4.5e-27	71.8
WP_025800910.1\|1593423_1593729_+	YbjC family protein	NA	NA	NA	NA
WP_025800911.1\|1593712_1594435_+	oxygen-insensitive NADPH nitroreductase	NA	NA	NA	NA
WP_096387014.1\|1594450_1595338_+	30S ribosomal protein S6--L-glutamate ligase	A0A1D8KN85	Synechococcus_phage	3.6e-36	36.7
WP_043492247.1\|1595334_1595529_-	DUF4250 domain-containing protein	NA	NA	NA	NA
WP_166493012.1\|1595671_1596163_+	YbjN domain-containing protein	NA	NA	NA	NA
WP_166493013.1\|1596563_1597670_+	spermidine/putrescine ABC transporter substrate-binding protein PotF	NA	NA	NA	NA
WP_043492254.1\|1597823_1598957_+	putrescine ABC transporter ATP-binding subunit PotG	G3M9Y6	Bacillus_virus	5.0e-30	35.9
WP_040045868.1\|1598967_1599930_+	putrescine ABC transporter permease PotH	NA	NA	NA	NA
WP_025800918.1\|1599929_1600775_+	putrescine ABC transporter permease PotI	NA	NA	NA	NA
WP_046449883.1\|1600933_1601425_+	DUF2593 family protein	NA	NA	NA	NA
WP_166493014.1\|1601532_1602666_+	23S rRNA (uracil(747)-C(5))-methyltransferase RlmC	A0A1X9I6F4	Streptococcus_phage	5.7e-26	27.4
WP_166493015.1\|1602653_1603142_-	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	1.7e-27	42.5
WP_043492268.1\|1603286_1604018_-	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_025800923.1\|1604247_1604916_-	arginine ABC transporter permease ArtM	NA	NA	NA	NA
WP_025800924.1\|1604915_1605632_-	arginine ABC transporter permease ArtQ	NA	NA	NA	NA
WP_025800925.1\|1605880_1606612_-	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_043492272.1\|1606681_1607410_-	arginine ABC transporter ATP-binding protein ArtP	G9BWD6	Planktothrix_phage	2.4e-30	36.2
WP_043492275.1\|1607620_1608538_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_043492278.1\|1608674_1609289_+	FMN-dependent NADH-azoreductase	NA	NA	NA	NA
WP_080737089.1\|1609344_1609683_+	helix-turn-helix domain-containing protein	D0R0F8	Streptococcus_phage	2.9e-10	33.0
WP_166493016.1\|1609845_1611246_+	Xaa-Pro aminopeptidase	NA	NA	NA	NA
WP_025800931.1\|1611289_1611610_-	heavy metal-binding domain-containing protein	NA	NA	NA	NA
WP_043492286.1\|1611657_1612518_+	N-acetylmuramoyl-L-alanine amidase	A0A223VZK2	Agrobacterium_phage	1.3e-11	32.8
WP_025800933.1\|1612511_1613531_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_025800934.1\|1613818_1615264_-	DUF2867 domain-containing protein	NA	NA	NA	NA
WP_166493017.1\|1615352_1616405_-	low-specificity L-threonine aldolase	NA	NA	NA	NA
WP_046358727.1\|1616641_1618363_-	ubiquinone-dependent pyruvate dehydrogenase	NA	NA	NA	NA
WP_166493018.1\|1618621_1619626_-	NADH oxidoreductase	NA	NA	NA	NA
WP_025800938.1\|1619689_1621342_-	hydroxylamine reductase	NA	NA	NA	NA
WP_025800939.1\|1621555_1622455_-	lysine exporter LysO family protein	NA	NA	NA	NA
WP_043492300.1\|1622678_1624349_+	ATP-dependent endonuclease	NA	NA	NA	NA
WP_111329263.1\|1624410_1625361_-	DUF535 domain-containing protein	NA	NA	NA	NA
WP_025800942.1\|1625721_1625943_-	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	1.5e-15	58.2
WP_004095820.1\|1626528_1626852_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	3.7e-15	43.8
WP_025800943.1\|1626878_1629155_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	8.7e-167	42.4

DBSCAN-SWA_4

1641349 : 1652910

Escherichia_phage(62.5%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_130992402.1\|1641349_1642693_+	replication-associated recombination protein A	G3MBE0	Bacillus_virus	1.3e-80	41.3
WP_025800951.1\|1642801_1644094_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	3.1e-92	43.8
WP_130992403.1\|1644577_1647022_+	dimethylsulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	5.1e-213	49.0
WP_025800953.1\|1647032_1647653_+	dimethylsulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	4.3e-76	59.6
WP_166493022.1\|1647654_1648515_+	dimethyl sulfoxide reductase anchor subunit	A0A077SK59	Escherichia_phage	9.6e-26	35.3
WP_166493023.1\|1648628_1649243_+	Tat proofreading chaperone DmsD	A0A077SLS7	Escherichia_phage	1.9e-28	39.2
WP_166493024.1\|1649242_1649830_+	4Fe-4S binding protein	A0A077SLP0	Escherichia_phage	4.2e-25	37.4
WP_043492326.1\|1649946_1651086_+	MFS transporter	NA	NA	NA	NA
WP_043492328.1\|1651161_1651617_-	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_025800959.1\|1652169_1652910_-	pyruvate formate lyase 1-activating protein	A0A2P0VNQ0	Tetraselmis_virus	8.0e-21	26.5

DBSCAN-SWA_5

1723209 : 1800200

uncultured_Caudovirales_phage(40.0%)

plate,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_043492591.1\|1723209_1724787_-\|protease	Lon protease family protein	NA	NA	NA	NA
WP_025801009.1\|1725163_1725622_+	macrodomain Ter protein MatP	NA	NA	NA	NA
WP_025801010.1\|1725757_1726813_-	porin OmpA	NA	NA	NA	NA
WP_025801011.1\|1727170_1727680_-	cell division inhibitor SulA	NA	NA	NA	NA
WP_025801012.1\|1727901_1728525_+	TfoX/Sxy family DNA transformation protein	NA	NA	NA	NA
WP_046361000.1\|1728611_1730747_-	TIGR01666 family membrane protein	NA	NA	NA	NA
WP_025801014.1\|1730758_1731205_-	YccF domain-containing protein	NA	NA	NA	NA
WP_166493039.1\|1731415_1733470_+	DNA helicase IV	A7KV33	Bacillus_phage	9.4e-19	26.1
WP_043492573.1\|1733514_1733973_-	methylglyoxal synthase	NA	NA	NA	NA
WP_096387134.1\|1734077_1734587_-	DUF2057 family protein	NA	NA	NA	NA
WP_096387137.1\|1734788_1735205_+	CoA-binding protein	NA	NA	NA	NA
WP_025801019.1\|1735261_1735582_-	heat shock protein HspQ	NA	NA	NA	NA
WP_166493040.1\|1735739_1736933_-	23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI	NA	NA	NA	NA
WP_043492578.1\|1737041_1737320_+	acylphosphatase	NA	NA	NA	NA
WP_025801022.1\|1737320_1737650_-	sulfurtransferase TusE	NA	NA	NA	NA
WP_008813056.1\|1737835_1738498_-\|protease	FtsH protease modulator YccA	A0A2H4JFM9	uncultured_Caudovirales_phage	8.1e-41	48.1
WP_166493801.1\|1738967_1739285_-	DUF4942 domain-containing protein	NA	NA	NA	NA
WP_166493041.1\|1739653_1749379_+	DUF4573 domain-containing protein	NA	NA	NA	NA
WP_043492603.1\|1749541_1750537_-	glutaminase A	NA	NA	NA	NA
WP_025802699.1\|1752222_1752540_-	DUF4387 domain-containing protein	NA	NA	NA	NA
WP_166493042.1\|1752536_1753910_-	DUF1446 domain-containing protein	NA	NA	NA	NA
WP_025802703.1\|1753911_1755156_-	methylaspartate ammonia-lyase	NA	NA	NA	NA
WP_025802707.1\|1755155_1756601_-	methylaspartate mutase subunit E	NA	NA	NA	NA
WP_096387146.1\|1756615_1758007_-	glutamate mutase	NA	NA	NA	NA
WP_111329293.1\|1758003_1758450_-	methylaspartate mutase subunit S	NA	NA	NA	NA
WP_166493043.1\|1759052_1759913_-	GHMP kinase	NA	NA	NA	NA
WP_043492618.1\|1759999_1760782_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA
WP_166493044.1\|1761533_1763069_+	cobyric acid synthase	NA	NA	NA	NA
WP_025802718.1\|1763094_1763853_+	adenosylcobinamide-GDP ribazoletransferase	NA	NA	NA	NA
WP_166493045.1\|1763875_1764940_+	nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase	NA	NA	NA	NA
WP_025802722.1\|1764972_1765896_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_166493046.1\|1766058_1767705_+	fumarate hydratase	NA	NA	NA	NA
WP_166493047.1\|1767721_1768312_+	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA
WP_043492645.1\|1768876_1769521_+	hypothetical protein	NA	NA	NA	NA
WP_025802730.1\|1770490_1770991_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_038502127.1\|1771016_1772570_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_166493048.1\|1772588_1773938_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_040045958.1\|1773934_1774594_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_166493049.1\|1774606_1776316_+	OmpA family protein	NA	NA	NA	NA
WP_025802740.1\|1776403_1776895_+	Hcp family type VI secretion system effector	NA	NA	NA	NA
WP_166493050.1\|1777102_1779838_+	type VI secretion system ATPase TssH	K4FB40	Cronobacter_phage	1.7e-92	29.5
WP_166493051.1\|1779831_1782342_+	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	9.4e-21	35.4
WP_096387183.1\|1782545_1783349_+	hypothetical protein	NA	NA	NA	NA
WP_166493052.1\|1783403_1784207_+	hypothetical protein	NA	NA	NA	NA
WP_166493053.1\|1784261_1785065_+	hypothetical protein	NA	NA	NA	NA
WP_096387186.1\|1785122_1785899_+	hypothetical protein	NA	NA	NA	NA
WP_166493054.1\|1785954_1786710_+	hypothetical protein	NA	NA	NA	NA
WP_096387192.1\|1786753_1787527_+	hypothetical protein	NA	NA	NA	NA
WP_166493055.1\|1787681_1789667_+	hypothetical protein	A0A077K801	Ralstonia_phage	1.2e-50	29.8
WP_096387198.1\|1789672_1789933_+	PAAR domain-containing protein	NA	NA	NA	NA
WP_166493056.1\|1789932_1791381_+	hypothetical protein	NA	NA	NA	NA
WP_166493057.1\|1791403_1794748_+	type VI secretion protein VasK	NA	NA	NA	NA
WP_115348616.1\|1794747_1796340_+	type VI secretion system protein TssA	NA	NA	NA	NA
WP_040045971.1\|1796417_1798181_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_166493058.1\|1798144_1799230_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_166493059.1\|1799210_1799759_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_040045974.1\|1799762_1800200_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA

DBSCAN-SWA_6

2168819 : 2182720

Tupanvirus(22.22%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_025801264.1\|2168819_2170757_+\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	1.6e-129	37.7
WP_025801265.1\|2170752_2171295_+	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	8.8e-17	33.7
WP_025801266.1\|2171393_2171591_+	50S ribosomal protein L35	NA	NA	NA	NA
WP_004089950.1\|2171633_2171990_+	50S ribosomal protein L20	NA	NA	NA	NA
WP_121626058.1\|2172120_2172165_+	pheST operon leader peptide PheM	NA	NA	NA	NA
WP_166493140.1\|2172457_2173441_+\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2H4UW22	Bodo_saltans_virus	1.7e-34	38.0
WP_130995045.1\|2173455_2175843_+\|tRNA	phenylalanine--tRNA ligase subunit beta	A0A1L3IZU3	BeAn_58058_virus	6.6e-08	28.9
WP_004089944.1\|2175847_2176144_+	integration host factor subunit alpha	A0A0H3UZA0	Geobacillus_virus	3.2e-13	40.0
WP_025801269.1\|2176227_2176425_+	protein DsrB	NA	NA	NA	NA
WP_166493813.1\|2176483_2177509_+	vitamin B12 ABC transporter permease BtuC	NA	NA	NA	NA
WP_166493814.1\|2177511_2178297_+	vitamin B12 ABC transporter ATP-binding protein BtuD	W5SAS9	Pithovirus	1.6e-06	26.6
WP_025801272.1\|2178580_2179729_+	UDP-4-amino-4-deoxy-L-arabinose aminotransferase	C7U074	Ostreococcus_tauri_virus	1.2e-23	27.8
WP_046449407.1\|2179721_2180738_+	undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase	A8CG95	Salmonella_phage	1.5e-38	33.9
WP_166493141.1\|2180737_2182720_+	bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA	A0A2K9KZK0	Tupanvirus	9.6e-21	25.4

DBSCAN-SWA_7

2549289 : 2606609

Enterobacteria_phage(25.0%)

plate,portal,head,terminase,tRNA,capsid,integrase,tail,lysis

attL 2564415:2564429|attR 2588623:2588637

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_072309757.1\|2549289_2550558_-	translesion error-prone DNA polymerase V subunit UmuC	I6RSM4	Salmonella_phage	1.1e-166	67.7
WP_072309758.1\|2550557_2550977_-	translesion error-prone DNA polymerase V autoproteolytic subunit	F1C5A6	Cronobacter_phage	2.2e-39	58.8
WP_072309760.1\|2551847_2552393_+	hypothetical protein	NA	NA	NA	NA
WP_157743844.1\|2552411_2552927_-\|tail	tail fiber assembly protein	F1BUK2	Cronobacter_phage	1.9e-29	40.6
WP_096387768.1\|2552934_2554599_-	hypothetical protein	S4TP62	Salmonella_phage	8.1e-29	26.7
WP_096387770.1\|2554591_2555143_-\|tail	phage tail protein I	A0A193GYD1	Enterobacter_phage	8.3e-31	39.0
WP_096387772.1\|2555135_2556050_-\|plate	baseplate assembly protein	D5LGZ3	Escherichia_phage	4.5e-66	45.7
WP_096387774.1\|2556033_2556384_-\|plate	baseplate assembly protein	D4HTV2	Vibrio_phage	2.1e-24	52.3
WP_096387776.1\|2556417_2557542_-	late control protein D	R9TNM7	Vibrio_phage	2.2e-38	34.1
WP_096387778.1\|2557544_2557760_-\|tail	phage tail protein	R9TR63	Vibrio_phage	2.8e-11	52.9
WP_096387780.1\|2557734_2558211_-\|tail	phage tail protein	D4HTW5	Vibrio_phage	1.7e-16	36.3
WP_096387782.1\|2560328_2560625_-\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_046360401.1\|2560679_2561186_-\|tail	tail protein	A0A1B2LRS4	Wolbachia_phage	2.9e-14	32.7
WP_166493271.1\|2561185_2562649_-\|tail	phage tail protein	K4HZC3	Acidithiobacillus_phage	5.5e-74	37.1
WP_096387786.1\|2562685_2563300_-\|plate	phage baseplate assembly protein V	A0A1B2LRU5	Wolbachia_phage	7.9e-14	37.9
WP_096387788.1\|2563292_2563832_-	hypothetical protein	R9TNK0	Vibrio_phage	6.9e-14	29.0
WP_166493272.1\|2563840_2564500_-	hypothetical protein	R9TR34	Vibrio_phage	3.3e-18	35.2
2564415:2564429	attL	NA	NA	NA	NA
WP_096387790.1\|2564501_2564876_-	hypothetical protein	NA	NA	NA	NA
WP_096387792.1\|2564883_2565267_-	hypothetical protein	K7P7M3	Enterobacteria_phage	3.4e-07	32.6
WP_096387794.1\|2565304_2566342_-\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	3.2e-132	68.2
WP_096387795.1\|2566417_2566744_-\|head	head decoration protein	E4WL24	Enterobacteria_phage	2.1e-29	60.4
WP_096387796.1\|2566754_2568047_-	S49 family peptidase	A0A2I6TC87	Escherichia_phage	5.2e-124	58.2
WP_096387798.1\|2568033_2569629_-\|portal	phage portal protein	A0A0K2FJC0	Enterobacteria_phage	1.3e-225	73.2
WP_072307257.1\|2569625_2569832_-\|tail	phage tail protein	K7PM10	Enterobacteria_phage	8.4e-13	53.8
WP_096387800.1\|2569833_2571750_-\|terminase	phage terminase large subunit family protein	K7PGW7	Enterobacteria_phage	6.6e-293	74.0
WP_096387802.1\|2571721_2572222_-	DNA-packaging protein	O64316	Escherichia_phage	3.7e-62	73.2
WP_072307254.1\|2572434_2572872_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_046459177.1\|2573401_2573650_+	DUF883 family protein	NA	NA	NA	NA
WP_096388758.1\|2574303_2574750_-\|lysis	lysis protein	M1FJ79	Enterobacteria_phage	3.5e-19	39.9
WP_166493273.1\|2574770_2575298_-	lysozyme	K7PLY1	Enterobacteria_phage	6.9e-67	68.0
WP_096387806.1\|2575297_2575567_-\|lysis	lysis protein	Q7Y3V4	Yersinia_phage	1.2e-14	45.3
WP_072308778.1\|2576104_2576398_+	DUF1883 domain-containing protein	NA	NA	NA	NA
WP_155403083.1\|2576495_2576654_+	hypothetical protein	NA	NA	NA	NA
WP_072308777.1\|2576756_2576990_-	hypothetical protein	NA	NA	NA	NA
WP_096387808.1\|2577224_2577920_-	hypothetical protein	A0A1W6JP37	Morganella_phage	4.2e-40	40.8
WP_096387810.1\|2577940_2578939_-	DUF968 domain-containing protein	K7PJS6	Enterobacterial_phage	5.6e-78	45.3
WP_096387812.1\|2578935_2579583_-	phage N-6-adenine-methyltransferase	K7PGU4	Enterobacteria_phage	9.9e-92	71.4
WP_130992435.1\|2579585_2579858_-	PerC family transcriptional regulator	NA	NA	NA	NA
WP_096387816.1\|2579860_2580727_-	GntR family transcriptional regulator	U5P0A0	Shigella_phage	5.3e-32	73.1
WP_072308768.1\|2580723_2580903_-	DUF4222 domain-containing protein	NA	NA	NA	NA
WP_096387818.1\|2581083_2581617_-	DNA-binding protein	A0A0P0ZE62	Stx2-converting_phage	6.2e-15	34.8
WP_096387820.1\|2581656_2581869_-	helix-turn-helix transcriptional regulator	K7PMD5	Enterobacterial_phage	2.1e-22	69.1
WP_096387822.1\|2581978_2582632_+	LexA family transcriptional regulator	K7PH71	Enterobacterial_phage	1.2e-81	69.8
WP_096387824.1\|2582997_2583342_+	hypothetical protein	NA	NA	NA	NA
WP_096387826.1\|2583334_2583943_+	3'-5' exoribonuclease	A0A0H4IPM9	Stenotrophomonas_phage	9.8e-17	31.4
WP_096387828.1\|2584014_2584266_+	excisionase	NA	NA	NA	NA
WP_096387830.1\|2584240_2585374_+\|integrase	tyrosine-type recombinase/integrase	Q77Z02	Phage_21	3.9e-160	74.5
WP_025797012.1\|2585485_2586739_-	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	5.7e-19	88.9
WP_111329605.1\|2586980_2587607_+	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
WP_025797016.1\|2587679_2588132_+	NUDIX hydrolase	NA	NA	NA	NA
WP_025797017.1\|2588411_2589032_+	4Fe-4S dicluster domain-containing protein	NA	NA	NA	NA
2588623:2588637	attR	NA	NA	NA	NA
WP_166493274.1\|2589033_2591049_+	hydrogenase 4 subunit B	NA	NA	NA	NA
WP_096387840.1\|2591059_2592010_+	respiratory chain complex I subunit 1 family protein	NA	NA	NA	NA
WP_130992436.1\|2592025_2593465_+	hydrogenase 4 subunit D	NA	NA	NA	NA
WP_025797022.1\|2593476_2594127_+	hydrogenase 4 membrane subunit	NA	NA	NA	NA
WP_046449176.1\|2594131_2595718_+	hydrogenase 4 subunit F	NA	NA	NA	NA
WP_166493275.1\|2595719_2597459_+	hydrogenase large subunit	NA	NA	NA	NA
WP_025797025.1\|2597469_2598021_+	hydrogenase 4 subunit H	NA	NA	NA	NA
WP_043493569.1\|2598017_2598794_+	NADH-quinone oxidoreductase subunit B family protein	NA	NA	NA	NA
WP_166493276.1\|2598793_2599225_+	HycH family protein	NA	NA	NA	NA
WP_166493822.1\|2599299_2601237_-	sigma 54-interacting transcriptional regulator	NA	NA	NA	NA
WP_043493574.1\|2601598_2602456_+	formate transporter FocA	NA	NA	NA	NA
WP_111329613.1\|2602644_2603370_+	hypothetical protein	NA	NA	NA	NA
WP_025797035.1\|2603468_2604053_+	fasciclin domain-containing protein	NA	NA	NA	NA
WP_043493578.1\|2604111_2604675_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_040046565.1\|2604671_2605355_+	hypothetical protein	NA	NA	NA	NA
WP_043493582.1\|2605505_2606609_+\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA

DBSCAN-SWA_8

3215172 : 3258656

Salmonella_phage(31.91%)

tail,integrase,head,holin

attL 3214106:3214120|attR 3258734:3258748

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3214106:3214120	attL	NA	NA	NA	NA
WP_166493428.1\|3215172_3215733_-	DUF4376 domain-containing protein	A0A0U2QQK4	Escherichia_phage	2.4e-57	61.8
WP_166493429.1\|3215740_3217504_-	hypothetical protein	Q8W611	Enterobacteria_phage	5.0e-37	43.0
WP_166493430.1\|3217527_3218085_-\|tail	tail fiber assembly protein	S4TUB9	Salmonella_phage	6.0e-37	45.0
WP_166493431.1\|3218094_3219444_-	hypothetical protein	U5N099	Enterobacteria_phage	1.4e-92	45.9
WP_166493432.1\|3219445_3220021_-	DUF2612 domain-containing protein	A9YX13	Burkholderia_phage	1.4e-33	38.9
WP_166493433.1\|3220017_3221208_-	hypothetical protein	A0A0M4RD32	Salmonella_phage	2.5e-104	49.5
WP_166493434.1\|3221200_3221548_-	hypothetical protein	A0A2H4J629	uncultured_Caudovirales_phage	8.3e-37	63.7
WP_166493435.1\|3221547_3222297_-	translation initiation factor IF-2	A0A0M5M1K7	Salmonella_phage	4.8e-98	72.5
WP_166493436.1\|3222342_3222588_-	DUF4282 domain-containing protein	A0A077KGV8	Edwardsiella_phage	1.8e-06	46.2
WP_166493437.1\|3222686_3223754_-	hypothetical protein	A0A0M4QX01	Salmonella_phage	4.9e-128	65.3
WP_166493438.1\|3223790_3224096_-	hypothetical protein	A0A0M4R5B7	Salmonella_phage	1.2e-20	51.0
WP_166493439.1\|3224086_3224668_-	hypothetical protein	A0A0M3ULD5	Salmonella_phage	1.4e-60	65.9
WP_166493440.1\|3224667_3226698_-	transglycosylase SLT domain-containing protein	A0A0M4REK7	Salmonella_phage	1.3e-193	53.6
WP_166493441.1\|3226687_3226864_-	NTP pyrophosphohydrolase	A0A2H4J1A2	uncultured_Caudovirales_phage	1.9e-13	71.4
WP_166493442.1\|3226884_3227301_-	hypothetical protein	A0A2H4J2V6	uncultured_Caudovirales_phage	1.3e-39	62.2
WP_166493443.1\|3227304_3227745_-	DUF3277 family protein	A0A2H4J619	uncultured_Caudovirales_phage	1.7e-63	81.5
WP_166493444.1\|3227756_3229238_-	DUF3383 domain-containing protein	A0A0P0I492	Acinetobacter_phage	3.7e-142	53.3
WP_166493445.1\|3229241_3229805_-	hypothetical protein	A0A2H4J1A0	uncultured_Caudovirales_phage	3.7e-50	52.0
WP_166493446.1\|3229779_3230169_-\|head,tail	head-tail adaptor	A0A2H4J1A4	uncultured_Caudovirales_phage	1.6e-41	67.2
WP_166493447.1\|3230168_3230666_-	hypothetical protein	NA	NA	NA	NA
WP_166493448.1\|3230662_3231070_-	DUF4054 domain-containing protein	A0A2H4J1A6	uncultured_Caudovirales_phage	5.3e-35	56.7
WP_166493449.1\|3231038_3231368_-	hypothetical protein	NA	NA	NA	NA
WP_166493450.1\|3231417_3232365_-	DUF2184 domain-containing protein	A0A2H4J191	uncultured_Caudovirales_phage	6.3e-103	57.9
WP_166493451.1\|3232375_3232879_-	hypothetical protein	A0A0M4QWZ6	Salmonella_phage	2.6e-31	49.4
WP_166493452.1\|3232889_3234164_-	DUF2213 domain-containing protein	A0A0M4R5A6	Salmonella_phage	1.4e-76	42.8
WP_166493832.1\|3234212_3234761_-	hypothetical protein	A0A0M4REK0	Salmonella_phage	8.8e-49	57.5
WP_166493453.1\|3234822_3236286_-	DUF1073 domain-containing protein	A0A0M4S6U1	Salmonella_phage	4.3e-151	54.3
WP_166493454.1\|3236287_3237904_-	TerL protein	A0A0M5M1R6	Salmonella_phage	7.8e-279	84.5
WP_166493833.1\|3238102_3238771_-	hypothetical protein	A0A0U2RXW9	Escherichia_phage	6.9e-88	80.4
WP_166493834.1\|3239127_3239343_-	hypothetical protein	NA	NA	NA	NA
WP_166493455.1\|3239362_3240241_-	hypothetical protein	A0A1B1INP7	uncultured_Mediterranean_phage	1.7e-78	52.6
WP_166493456.1\|3240233_3241028_-	ParB N-terminal domain-containing protein	R4TG31	Halovirus	1.6e-51	43.4
WP_166493457.1\|3241300_3241483_-	DUF4222 domain-containing protein	NA	NA	NA	NA
WP_166493458.1\|3241746_3242289_-	glycoside hydrolase family 108 protein	A0A0U2S643	Escherichia_phage	2.0e-85	81.0
WP_166493459.1\|3242275_3242572_-\|holin	phage holin family protein	K7PKN9	Enterobacterial_phage	4.2e-05	36.8
WP_166493835.1\|3242572_3242968_-	hypothetical protein	NA	NA	NA	NA
WP_166493460.1\|3243815_3244760_+	hypothetical protein	A5LH79	Enterobacteria_phage	1.8e-65	43.0
WP_166493461.1\|3244781_3245231_+	hypothetical protein	A5LH78	Enterobacteria_phage	2.6e-22	45.2
WP_166493462.1\|3245267_3245654_-	antitermination protein Q	A5LH77	Enterobacteria_phage	1.3e-51	84.0
WP_166493463.1\|3245653_3245992_-	DUF1364 domain-containing protein	H9C174	Pectobacterium_phage	1.6e-29	69.2
WP_166493464.1\|3245991_3246600_-	DUF1367 family protein	K7PKS6	Enterobacteria_phage	1.8e-58	55.7
WP_166493465.1\|3246894_3247134_-	DinI-like family protein	A0A0M4REN2	Salmonella_phage	9.5e-16	51.9
WP_166493466.1\|3247215_3247959_-	hypothetical protein	A0A248SL55	Klebsiella_phage	5.6e-22	37.6
WP_166493467.1\|3248882_3249140_-	helix-turn-helix domain-containing protein	H6WRX5	Salmonella_phage	1.1e-12	41.9
WP_166493468.1\|3249239_3249665_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_166493469.1\|3249978_3250512_-	hypothetical protein	A4KWR7	Enterobacteria_phage	2.5e-24	34.9
WP_166493470.1\|3250795_3251092_+	hypothetical protein	NA	NA	NA	NA
WP_166493471.1\|3251096_3251402_+	hypothetical protein	NA	NA	NA	NA
WP_166493472.1\|3251488_3251680_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA
WP_166493473.1\|3251676_3251955_-	hypothetical protein	NA	NA	NA	NA
WP_166493474.1\|3252464_3252656_+	hypothetical protein	NA	NA	NA	NA
WP_166493475.1\|3252652_3253186_+	ORF6N domain-containing protein	A0A0P0ZC44	Stx2-converting_phage	2.7e-50	79.7
WP_166493476.1\|3253203_3253359_+	host cell division inhibitory peptide Kil	NA	NA	NA	NA
WP_166493477.1\|3253558_3253927_+	hypothetical protein	A0A088CD28	Shigella_phage	4.1e-10	37.3
WP_166493478.1\|3253932_3255789_+	hypothetical protein	H9C157	Pectobacterium_phage	5.4e-82	34.7
WP_166493479.1\|3255785_3256289_+	siphovirus Gp157 family protein	H9C156	Pectobacterium_phage	5.2e-56	69.1
WP_166493480.1\|3256333_3256792_+	hypothetical protein	A0A248SL53	Klebsiella_phage	8.7e-18	42.7
WP_166493481.1\|3256803_3257088_+	hypothetical protein	NA	NA	NA	NA
WP_166493482.1\|3257081_3257270_+	hypothetical protein	NA	NA	NA	NA
WP_166493483.1\|3257389_3257650_+	excisionase	A0A1V0E5M4	Salmonella_phage	7.6e-11	48.6
WP_166493484.1\|3257588_3258656_+\|integrase	tyrosine-type recombinase/integrase	Q9G075	Enterobacteria_phage	1.5e-105	52.5
3258734:3258748	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP050151

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP050150

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection