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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP050022 Bradyrhizobium sp. 1(2017) strain 63S1MB chromosome, complete genome 1 crisprs DEDDh,csa3,WYL 0 1 3 0

Results visualization

1. NZ_CP050022
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP050022_1 3026968-3027174 Orphan NA
3 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP050022_1 1.2|3027055|33|NZ_CP050022|CRISPRCasFinder 3027055-3027087 33 NZ_CP028348 Novosphingobium sp. THN1 plasmid pTHN, complete sequence 688043-688075 9 0.727

1. spacer 1.2|3027055|33|NZ_CP050022|CRISPRCasFinder matches to NZ_CP028348 (Novosphingobium sp. THN1 plasmid pTHN, complete sequence) position: , mismatch: 9, identity: 0.727

aatgccgccgttggtcttggtcgcgttggtcgg	CRISPR spacer
ggcaatgccgttggacttggtcgcgctggtcag	Protospacer
.... .******** **********.*****.*

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 4137277 : 4147479 12 uncultured_Mediterranean_phage(88.89%) tRNA NA
DBSCAN-SWA_2 5865118 : 5875818 8 Escherichia_phage(42.86%) NA NA
DBSCAN-SWA_3 7394464 : 7401694 6 Bacillus_phage(16.67%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage