CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP049080	Escherichia coli strain p10A plasmid p10A_p3, complete sequence	0 crisprs	NA	0	0
NZ_CP049084	Escherichia coli strain p10A plasmid p10A_p4, complete sequence	0 crisprs	NA	0	0
NZ_CP049081	Escherichia coli strain p10A chromosome, complete genome	4 crisprs	csa3,PD-DExK,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DinG,c2c9_V-U4,DEDDh,RT	13	9
NZ_CP049082	Escherichia coli strain p10A plasmid p10A_p1, complete sequence	0 crisprs	csa3	0	1
NZ_CP049083	Escherichia coli strain p10A plasmid p10A_p2, complete sequence	0 crisprs	NA	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP049081_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP049081_1

983960-984355

Orphan

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACC	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCGA	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACC	CRT

6 spacers

The CRISPR arrays of NZ_CP049081_1

>merge|NZ_CP049081|1|983960-984355|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGAGATAAACCGGCAAAAACCGGGCAATCGCAAAAAGGCGTAATGTGTTCCCCGCGCCAGCGGGGATAAACCTGTGTTTGCGGCATTAACGCTCACCAGTATTTCGTGTTCCCCGCGCCAGCGGGGATAAACCGACGTGGTCATGGGTGCTGCTGTTGCAGAGCCAGTGTTCCCCGCGCCAGCGGGGATAAACCGAGCAGATACACGGCTTTGTATTCCGTGCGCCCGTGTTCCCCGCGCCAGCGGGGATAAACCGAATAGCAATAGTCCATAGATTTGCGAAAACAGGTGTTCCCCGCGCCAGCGGGGATAAACCGGAGCCTGACGAGACTACTGAGGCCGTTCTGTCGAGTTCCCCGCGCCAGCGGGGATAAACCAC

>NZ_CP049081|1|1|983960-984353|PILER-CR
GTGTTCCCCGCGCCAGCGGAGATAAACC	GGCAAAAACCGGGCAATCGCAAAAAGGCGTAAT
GTGTTCCCCGCGCCAGCGGGGATAAACC	TGTGTTTGCGGCATTAACGCTCACCAGTATTTC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GACGTGGTCATGGGTGCTGCTGTTGCAGAGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GAGCAGATACACGGCTTTGTATTCCGTGCGCCC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GAATAGCAATAGTCCATAGATTTGCGAAAACAG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGAGCCTGACGAGACTACTGAGGCCGTTCTGTC
GAGTTCCCCGCGCCAGCGGGGATAAACC

>NZ_CP049081|1|1|983960-984355|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGAGATAAACCGG	CAAAAACCGGGCAATCGCAAAAAGGCGTAAT
GTGTTCCCCGCGCCAGCGGGGATAAACCTG	TGTTTGCGGCATTAACGCTCACCAGTATTTC
GTGTTCCCCGCGCCAGCGGGGATAAACCGA	CGTGGTCATGGGTGCTGCTGTTGCAGAGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCGA	GCAGATACACGGCTTTGTATTCCGTGCGCCC
GTGTTCCCCGCGCCAGCGGGGATAAACCGA	ATAGCAATAGTCCATAGATTTGCGAAAACAG
GTGTTCCCCGCGCCAGCGGGGATAAACCGG	AGCCTGACGAGACTACTGAGGCCGTTCTGTC
GAGTTCCCCGCGCCAGCGGGGATAAACCAC

>NZ_CP049081|1|1|983960-984353|CRT
GTGTTCCCCGCGCCAGCGGAGATAAACC	GGCAAAAACCGGGCAATCGCAAAAAGGCGTAAT
GTGTTCCCCGCGCCAGCGGGGATAAACC	TGTGTTTGCGGCATTAACGCTCACCAGTATTTC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GACGTGGTCATGGGTGCTGCTGTTGCAGAGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GAGCAGATACACGGCTTTGTATTCCGTGCGCCC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GAATAGCAATAGTCCATAGATTTGCGAAAACAG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGAGCCTGACGAGACTACTGAGGCCGTTCTGTC
GAGTTCCCCGCGCCAGCGGGGATAAACC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP049081.1\|WP_001071648.1\|977681_978473_+\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NZ_CP049081.1\|WP_000021334.1\|988870_989656_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187605
NZ_CP049081.1\|WP_000226815.1\|974715_976950_+\|GTP-pyrophosphokinase	unknown	unknown	gnl\|CDD\|182797
NZ_CP049081.1\|WP_001199973.1\|982948_983620_+\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
NZ_CP049081.1\|WP_000907716.1\|993331_994225_+\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	unknown	unknown	gnl\|CDD\|224936
NZ_CP049081.1\|WP_000059306.1\|989725_991180_+\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223354
NZ_CP049081.1\|WP_001301334.1\|995215_996487_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|182194
NZ_CP049081.1\|WP_000210878.1\|978700_980338_+\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_CP049081.1\|WP_000581937.1\|977027_977276_+\|type-II-toxin-antitoxin-system-antitoxin-MazE	unknown	unknown	gnl\|CDD\|182082
NZ_CP049081.1\|WP_001130266.1\|994372_994948_-\|glycerol-3-phosphate-responsive-antiterminator	unknown	unknown	gnl\|CDD\|224865
NZ_CP049081.1\|WP_001268460.1\|981783_982656_-\|YgcG-family-protein	unknown	unknown	gnl\|CDD\|224429
NZ_CP049081.1\|WP_000036723.1\|980425_981724_+\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_CP049081.1\|WP_000987944.1\|996564_996930_-\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264
NZ_CP049081.1\|WP_001299652.1\|992588_993368_+\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	unknown	unknown	gnl\|CDD\|224997
NZ_CP049081.1\|WP_000109529.1\|994964_995225_-\|ferredoxin-family-protein	unknown	unknown	gnl\|CDD\|225289
NZ_CP049081.1\|WP_000039688.1\|984992_986471_-\|kinase	unknown	unknown	gnl\|CDD\|212662
NZ_CP049081.1\|WP_001288228.1\|982669_982810_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP049081.1\|WP_000254738.1\|977275_977611_+\|endoribonuclease-MazF	unknown	unknown	gnl\|CDD\|182138
NZ_CP049081.1\|WP_000147666.1\|991201_992611_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340929
NZ_CP049081.1\|WP_000046812.1\|973366_974668_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl\|CDD\|237291

Protein	Function_ID	Function_description	E-value
NZ_CP049081.1\|WP_001071648.1\|977681_978473_+\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	8.97718e-160
NZ_CP049081.1\|WP_000021334.1\|988870_989656_+\|SDR-family-oxidoreductase	gnl\|CDD\|187605	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs. Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	7.96451e-139
NZ_CP049081.1\|WP_000226815.1\|974715_976950_+\|GTP-pyrophosphokinase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	0
NZ_CP049081.1\|WP_001199973.1\|982948_983620_+\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	3.98248e-155
NZ_CP049081.1\|WP_000907716.1\|993331_994225_+\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	gnl\|CDD\|224936	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion].	6.66577e-90
NZ_CP049081.1\|WP_000059306.1\|989725_991180_+\|FAD-binding-oxidoreductase	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	2.41244e-83
NZ_CP049081.1\|WP_001301334.1\|995215_996487_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|182194	PRK10015, PRK10015, oxidoreductase; Provisional.	5.03655e-125
NZ_CP049081.1\|WP_000210878.1\|978700_980338_+\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP049081.1\|WP_000581937.1\|977027_977276_+\|type-II-toxin-antitoxin-system-antitoxin-MazE	gnl\|CDD\|182082	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE.	6.19513e-48
NZ_CP049081.1\|WP_001130266.1\|994372_994948_-\|glycerol-3-phosphate-responsive-antiterminator	gnl\|CDD\|224865	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription].	5.83077e-88
NZ_CP049081.1\|WP_001268460.1\|981783_982656_-\|YgcG-family-protein	gnl\|CDD\|224429	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only].	3.25867e-100
NZ_CP049081.1\|WP_000036723.1\|980425_981724_+\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_CP049081.1\|WP_000987944.1\|996564_996930_-\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	9.8593e-60
NZ_CP049081.1\|WP_001299652.1\|992588_993368_+\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	gnl\|CDD\|224997	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion].	1.56693e-62
NZ_CP049081.1\|WP_000109529.1\|994964_995225_-\|ferredoxin-family-protein	gnl\|CDD\|225289	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion].	7.43419e-42
NZ_CP049081.1\|WP_000039688.1\|984992_986471_-\|kinase	gnl\|CDD\|212662	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins. This subfamily consists of uncharacterized hypothetical bacterial proteins with similarity to Escherichia coli sugar kinase ygcE , whose functional roles are not yet clear. Escherichia coli ygcE is recognized by this model, but is not present in the alignment as it contains a deletion relative to other members of the group. These proteins belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.	1.27376e-109
NZ_CP049081.1\|WP_000254738.1\|977275_977611_+\|endoribonuclease-MazF	gnl\|CDD\|182138	PRK09907, PRK09907, endoribonuclease MazF.	1.17475e-74
NZ_CP049081.1\|WP_000147666.1\|991201_992611_+\|MFS-transporter	gnl\|CDD\|340929	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	8.50431e-51
NZ_CP049081.1\|WP_000046812.1\|973366_974668_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl\|CDD\|237291	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD.	0

>NZ_CP049081.1|WP_001199973.1|982948_983620_+|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWEKLEDREVSLFSILAKTKESDKWGAASSEDLLAVIGRQGYTARHVVITGGEPCIHDLLPLTDLLEKNGFSCQIETSGTHEVRCTPNTWVTVSPKLNMRGGYEVLSQALERANEIKHPVGRVRDIEALDELLATLTDDKPRVIALQPISQKDDATRLCIETCIARNWRLSMQTHKYLNIA
>NZ_CP049081.1|WP_001288228.1|982669_982810_-|hypothetical-protein
MSEENKENGFNHVKTFTKIIFIFSVLVFNDNEYKITDAAVNLFIQI
>NZ_CP049081.1|WP_001268460.1|981783_982656_-|YgcG-family-protein
MRYFILMFTFVCSFVAAQPTIVPQLQQQVTDLTSSLNSQEKKELTHKLESIFNNTQVQIAVLIVPTTKDETIEQYATRVFDNWRLGDAKRNDGILIVVAWSDRTVRIQVGYGLEEKVTDALAGDIIRSNMIPAFKQQKLAKGLELAINALNNQLTSQHQYPTNPSESESASSSDHYYFAIFWVFAVMFFPFWFFHQGSNFCRACKSGVCISAIYLLDLFLFSDKIFSIAVFSFFFTFTIFMVFTCLCVLQKRASGRSYHSDNSGSAGGSDSGGFSGGGGSSGGGGASGRW
>NZ_CP049081.1|WP_000036723.1|980425_981724_+|phosphopyruvate-hydratase
MSKIVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALIGKDAKDQAGIDKIMIDLDGTENKSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>NZ_CP049081.1|WP_000210878.1|978700_980338_+|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQMAVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIFEEANPVSEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVETRGVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVDDSLVRQLYNAPTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEFQKRQAK
>NZ_CP049081.1|WP_001071648.1|977681_978473_+|nucleoside-triphosphate-pyrophosphohydrolase
MNQIDRLLTIMQRLRDPENGCPWDKEQTFATIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFADSSAENSSEVLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCANVGFDWTTLGPVVDKVYEEIDEVMYEARQAVVDQAKLEEEMGDLLFATVNLARHLGTKAEIALQKANEKFERRFREVERIVAARGLEMTGVDLETMEEVWQQVKRQEIDL
>NZ_CP049081.1|WP_000254738.1|977275_977611_+|endoribonuclease-MazF
MVSRYVPDMGDLIWVDFDPTKGSEQAGHRPAVVLSPFMYNNKTGMCLCVPCTTQSKGYPFEVVLSGQERDGVALADQVKSIAWRARGATKKGTVAPEELQLIKAKINVLIG
>NZ_CP049081.1|WP_000581937.1|977027_977276_+|type-II-toxin-antitoxin-system-antitoxin-MazE
MIHSSVKRWGNSPAVRIPATLMQALNLNIDDEVKIDLVDGKLIIEPVRKEPVFTLAELVNDITPENLHENIDWGEPKDKEVW
>NZ_CP049081.1|WP_000226815.1|974715_976950_+|GTP-pyrophosphokinase
MVAVRSAHINKAGEFDPEKWIASLGITSQKSCECLAETWAYCLQQTQGHPDASLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSVVNLIHGVRDMAAIRQLKATHTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKAEGVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAAAGGARSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAGRQILDDELEHLGISLKEAEKHLLPRYNFNDVDELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKSYTPQNRSKDNGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVDAVWGESYSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGS
>NZ_CP049081.1|WP_000046812.1|973366_974668_+|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MAQFYSAKRRTTTRQIITVSVNDLDSFGQGVARHNGKTLFIPGLLPQENAEVTVTEDKKQYARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQQRSKSAALARLMKHDVSEVIADVPWGYRRRARLSLNYLPKTQQLQMGFRKAGSSDIVDVKQCPILAPQLEALLPKVRACLGSLQAMRHLGHVELVQATSGTLMILRHTAPLSSADREKLERFSHSEGLDLYLAPDSEILETVSGEMPWYDSNGLRLTFSPRDFIQVNAGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAAGVMQQIIKLEPIRIVYVSCNPATLARDSEALLKAGYTIARLAMLDMFPHTGHLESMVLFSRVK
>NZ_CP049081.1|WP_000039688.1|984992_986471_-|kinase
MSKKYIIGIDGGSQSTKVVMYDLEGNVVCEGKGLLQPMHTPDADTAEHPDDDLWASLCFAGHDLMSQFAGNKEDIVGIGLGSIRCCRALLKADGTPAAPLISWQDARVTRPYEHTNPDVAYVTSFSGYLTHRLTGEFKDNIANYFGQWPVDYKSWAWSEDAAVMDKFNIPRHMLFDVQMPGTVLGHITPQAALATHFPAGLPVVCTTSDKPVEALGAGLLDDETAVISLGTYIALMMNGKALPKDPVAYWPIMSSIPQTLLYEGYGIRKGMWTVSWLRDMLGESLIQDARAQDLSPEDLLNKKASCVPPGCNGLMTVLDWLTNPWEPYKRGIMIGFDSSMDYAWIYRSILESVALTLKNNYDNMCNEMNHFAKHVIITGGGSNSDLFMQIFADVFNLPARRNAINGCASLGAAINTAVGLGLYPDYATAVDNMVRVKDIFIPIESNAKRYDAMNKGIFKDLTKHTDVILKKSYEVMHGELGNVDSIQSWSNA
>NZ_CP049081.1|WP_000021334.1|988870_989656_+|SDR-family-oxidoreductase
MSIESLNAFSMDFFSLKGKTAIVTGGNSGLGQAFAMALAKAGANIFIPSFVKDNGETKEMIEKQGVEVDFMQVGITAEGAPQKIIAACCERFGTVDILVNNAGICKLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGGQWSPAYSATKHALAGFTKAYCDELGQYNIQVNGIAPGYYATDITLATRSNPETNQRVLDHIPANRWGDTQDLMGAAVFLASPASNYVNGHLLVVDGGYLVR
>NZ_CP049081.1|WP_000059306.1|989725_991180_+|FAD-binding-oxidoreductase
MSLSRAAIVDQLKEIVGADRVITDETVLKKNSIDRFRKFPDIHGIYTLPIPAAVVKLGSTEQVSRVLNFMNAHKINGVPRTGASATEGGLETVVENSVVLDGSAMNQIINIDIENMQATAQCGVPLEVLENALREKGYTTGHSPQSKPLAQMGGLVATRSIGQFSTLYGAIEDMVVGLEAVLADGTVTRIKNVPRRAAGPDIRHIIIGNEGALCYITEVTVKIFKFTPENNLFYGYILEDMKTGFNILREIMVEGYRPSIARLYDAEDGTQHFTHFADGKCVLIFMAEGNPRIAKVTGEGIAEIVARYPQCQRVDSKLIETWFNNLNWGPDKVAAERVQILKTGNMGFTTEVSGCWSCIHEIYESVINRIRTEFPHADDITMLGGHSSHSYQNGTNMYFVYDYNIVDCKPEEEIDKYHNPLNKIICEETIRLGGSMVHHHGIGKHRVHWSKLEHGSAWALLEGLKKQFDPNGIMNTGTIYPIEK
>NZ_CP049081.1|WP_000147666.1|991201_992611_+|MFS-transporter
MTGRCLFGFSGEKPFLLPDNEGVKMNTSPVRMDDLPLNRFHCRIAALTFGAHLTDGYVLGVIGYAIIQLTPAMQLTPFMAGMIGGSALLGLFLGSLVLGWISDHIGRQKIFTFSFLLITLASFLQFFATTPEHLIGLRILIGIGLGGDYSVGHTLLAEFSPRRHRGILLGAFSVVWTVGYVLASIAGHHFISENPEAWRWLLASAALPALLITLLRWGTPESPRWLLRQGRFAEAHAIVHRYFGPHVLLGDEVVTATHKHIKTLFSSRYWRRTAFNSVFFVCLVIPWFVIYTWLPTIAQTIGLEDALTASLMLNALLIVGALLGLVLTHLLAHRKFLLGSFLLLAATLVVMACLPSGSSLTLLLFVLFSTTISAVSNLVGILPAESFPTDIRSLGVGFATAMSRLGAAVSTGLLPWVLAQWGMQVTLLLLATVLLVGFVVTWLWAPETKALPLVAAGNVGGANEHSVSV
>NZ_CP049081.1|WP_001299652.1|992588_993368_+|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein
MNILLAFKAEPDAGMLAEKEWQAAAQGKSGPDISLLRSLLGADEQAAAALLLAQRKNGTPMSLTALSMGDERALHWLRYLMALGFEEAVLLETAADLRFAPEFVARHIAEWQHQNPLDLIITGCQSSEGQNGQTPFLLAEMLGWPCFTQVERFTLDALFITLEQRTEHGLRCCRVRLPAVIAVRQCGEVALPVPGMRQRMAAGKAEIIRKTVAAEMPAMQCLQLARAEQRRGATLIDGQTVAEKAQKLWQDYLRQRMQP
>NZ_CP049081.1|WP_000907716.1|993331_994225_+|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein
MAGLFTPKDAAMNIAIVTINQENAAIASWLAAQDFSGCTLAHWQIEPQPVVAEQVLDALVEQWQRTPADVVLFPPGTFGDELSTRLAWRLHGASICQVTSLDIPTVSVRKSHWGNALTATLQTEKRPLCLSLARQAGAAKNATLPSGMQQLNIVPGALPDWLVSTEDLKNVTRDPLAEARRVLVVGQGGEADNQEIAMLAEKLGAEVGYSRARVMNGGVDAEKVIGISGHLLAPEVCIVVGASGAAALMAGVRNSKFVVAINHDASAAVFSQADVGVVDDWKVVLEALVTNIHADCQ
>NZ_CP049081.1|WP_001130266.1|994372_994948_-|glycerol-3-phosphate-responsive-antiterminator
MPLLHLLRQNPVIAAVKDNASLQLAIDSECQFISVLYGNICTISNIVKKIKNAGKYAFIHVDLLEGASNKEVVIQFLKLVTEADGIISTKASMLKAARAEGFFCIHRLFIVDSISFHNIDKQVAQSNPDCIEILPGCMPKVLGWVTEKIRQPLIAGGLVCDEEDARNAINAGVVALSTTNTGVWTLAKKLL
>NZ_CP049081.1|WP_000109529.1|994964_995225_-|ferredoxin-family-protein
MSVARNLWRVADAPHIVPADSVERQTAERLINACPAGLFSLTPEGNLRIDYRSCLECGTCRLLCDESTLQQWRYPPSGFGITYRFG
>NZ_CP049081.1|WP_001301334.1|995215_996487_-|FAD-dependent-oxidoreductase
MEDDCDIIIIGAGIAGTACALRCARAGLSVLLLERAEIPGSKNLSGGRLYTHALAELLPQFHLTAPLERRITHESLSLLTPDGVTTFSSLQPGGESWSVLRARFDPWLVAEAEKEGVECIPGATVDALYEENGRVCGVICGDDILRARYVVLAEGANSVLAERHGLVTRPAGEAMALGIKEVLSLETSAIEERFHLENNEGAALLFSGRICDDLPGGAFLYTNQQTLSLGIVCPLSSLTQSRVPASELLTRFKAHPAVRPLIKNTESLEYGAHLVPEGGLHSMPVQYAGNGWLLVGDALRSCVNTGISVRGMDMALTGAQAAAQTLISACQHREPQNLFPLYHHNVERSLLWDVLQRYQHVPALLQRPGWYRTWPALMQDISRDLWDQGDKPVPPLRQLFWHHLRRHGLWHLAGDVIRSLRCL
>NZ_CP049081.1|WP_000987944.1|996564_996930_-|6-carboxytetrahydropterin-synthase-QueD
MMSTTLFKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIIDFAELKAAFKPTYERLDHHYLNDIPGLENPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCIYRGE

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Crispr_ID: NZ_CP049081_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP049081_2

1010681-1011258

TypeI-E

I-E

Consensus_repeat	Method
GAGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

9 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NZ_CP049081_2

>merge|NZ_CP049081|2|1010681-1011258|PILER-CR,CRISPRCasFinder,CRT
GAGTTCCCCGCGCCAGCGGGGATAAACCGTCAGCTTTATAAATCCGGAGATACGGAAACTAGAGTTCCCCGCGCCAGCGGGGATAAACCGGACTCACCCCGAAAGAGATTGCCAGCCAGCTTGAGTTCCCCGCGCCAGCGGGGATAAACCGCTGCTGGAGCTGGCTGCAAGGCAAGCCGCCCAGAGTTCCCCGCGCCAGCGGGGATAAACCGCCCACCAGCGCGTTTTTTGCCGGGGCCATAGTGAGTTCCCCGCGCCAGCGGGGATAAACCGTTGAACTCACCACGATTGTTAATATGGACGATGAGTTCCCCGCGCCAGCGGGGATAAACCGGGGGGCGCATGACCGTAAACATTATCCCCCGGGAGTTCCCCGCGCCAGCGGGGATAAACCGGGAGTTCAGACATAGGTGGAATGATGGACTACGAGTTCCCCGCGTTAGCGGGGATAAACCGCCCGGTAGCCAGGTTTGCAACGCCTGAACCGAGAGTTCCCCGCGCCAGCAGGGATAAACCGGCAACGACGGTGAGATTTCACGCCTGACGCTGGTGTTCCCCGCATCAGCGGGGATAAACCG

>NZ_CP049081|2|2|1010681-1011014|PILER-CR
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TCAGCTTTATAAATCCGGAGATACGGAAACTA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GACTCACCCCGAAAGAGATTGCCAGCCAGCTT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CTGCTGGAGCTGGCTGCAAGGCAAGCCGCCCA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CCCACCAGCGCGTTTTTTGCCGGGGCCATAGT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TTGAACTCACCACGATTGTTAATATGGACGAT
GAGTTCCCCGCGCCAGCGGGGATAAACCG

>NZ_CP049081|2|2|1010681-1011258|CRISPRCasFinder
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TCAGCTTTATAAATCCGGAGATACGGAAACTA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GACTCACCCCGAAAGAGATTGCCAGCCAGCTT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CTGCTGGAGCTGGCTGCAAGGCAAGCCGCCCA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CCCACCAGCGCGTTTTTTGCCGGGGCCATAGT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TTGAACTCACCACGATTGTTAATATGGACGAT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGGGGCGCATGACCGTAAACATTATCCCCCGG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGAGTTCAGACATAGGTGGAATGATGGACTAC
GAGTTCCCCGCGTTAGCGGGGATAAACCG	CCCGGTAGCCAGGTTTGCAACGCCTGAACCGA
GAGTTCCCCGCGCCAGCAGGGATAAACCG	GCAACGACGGTGAGATTTCACGCCTGACGCTG
GTGTTCCCCGCATCAGCGGGGATAAACCG

>NZ_CP049081|2|2|1010681-1011258|CRT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TCAGCTTTATAAATCCGGAGATACGGAAACTA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GACTCACCCCGAAAGAGATTGCCAGCCAGCTT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CTGCTGGAGCTGGCTGCAAGGCAAGCCGCCCA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CCCACCAGCGCGTTTTTTGCCGGGGCCATAGT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TTGAACTCACCACGATTGTTAATATGGACGAT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGGGGCGCATGACCGTAAACATTATCCCCCGG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGAGTTCAGACATAGGTGGAATGATGGACTAC
GAGTTCCCCGCGTTAGCGGGGATAAACCG	CCCGGTAGCCAGGTTTGCAACGCCTGAACCGA
GAGTTCCCCGCGCCAGCAGGGATAAACCG	GCAACGACGGTGAGATTTCACGCCTGACGCTG
GTGTTCCCCGCATCAGCGGGGATAAACCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP049081.1\|WP_001246104.1\|1015621_1015945_+\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
NZ_CP049081.1\|WP_000372108.1\|1012629_1013538_+\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP049081.1\|WP_000246138.1\|1016468_1017179_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NZ_CP049081.1\|WP_000568943.1\|1017654_1018704_+\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NZ_CP049081.1\|WP_001381369.1\|1010290_1010575_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_CP049081.1\|WP_000064451.1\|1007001_1008093_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	cd09646_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP049081.1\|WP_000281400.1\|1008756_1009356_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
NZ_CP049081.1\|WP_071532149.1\|1005029_1006514_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|236613
NZ_CP049081.1\|WP_001219242.1\|1017178_1017658_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
NZ_CP049081.1\|WP_000220066.1\|1009371_1010289_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP049081.1\|WP_000433153.1\|1001924_1004591_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|182031
NZ_CP049081.1\|WP_001295182.1\|1018684_1019446_+\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NZ_CP049081.1\|WP_000490428.1\|1011340_1012378_-\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NZ_CP049081.1\|WP_001173673.1\|1014966_1015572_+\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NZ_CP049081.1\|WP_000752800.1\|1006506_1006989_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09670_cse2gr11_CAS-I-E	gnl\|CDD\|187801
NZ_CP049081.1\|WP_000039850.1\|1000831_1001566_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP049081.1\|WP_001090361.1\|1013539_1014967_+\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP049081.1\|WP_001334996.1\|1008095_1008770_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|273842
NZ_CP049081.1\|WP_001290699.1\|999044_1000757_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
NZ_CP049081.1\|WP_000517476.1\|1016138_1016450_+\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156

Protein	Function_ID	Function_description	E-value
NZ_CP049081.1\|WP_001246104.1\|1015621_1015945_+\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	1.22003e-52
NZ_CP049081.1\|WP_000372108.1\|1012629_1013538_+\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP049081.1\|WP_000246138.1\|1016468_1017179_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	3.26939e-121
NZ_CP049081.1\|WP_000568943.1\|1017654_1018704_+\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NZ_CP049081.1\|WP_001381369.1\|1010290_1010575_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	4.76227e-62
NZ_CP049081.1\|WP_000064451.1\|1007001_1008093_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	7.47747e-154
NZ_CP049081.1\|WP_000281400.1\|1008756_1009356_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	1.81669e-101
NZ_CP049081.1\|WP_071532149.1\|1005029_1006514_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|236613	PRK09693, PRK09693, Cascade antiviral complex protein; Validated.	0
NZ_CP049081.1\|WP_001219242.1\|1017178_1017658_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.56248e-104
NZ_CP049081.1\|WP_000220066.1\|1009371_1010289_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	2.68794e-159
NZ_CP049081.1\|WP_000433153.1\|1001924_1004591_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	0
NZ_CP049081.1\|WP_001295182.1\|1018684_1019446_+\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.92279e-150
NZ_CP049081.1\|WP_000490428.1\|1011340_1012378_-\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NZ_CP049081.1\|WP_001173673.1\|1014966_1015572_+\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	7.34447e-148
NZ_CP049081.1\|WP_000752800.1\|1006506_1006989_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187801	cd09670, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	1.76293e-33
NZ_CP049081.1\|WP_000039850.1\|1000831_1001566_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	2.39575e-137
NZ_CP049081.1\|WP_001090361.1\|1013539_1014967_+\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP049081.1\|WP_001334996.1\|1008095_1008770_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|273842	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is part of the ECOLI subtype CRISPR/Cas locus, and now characterized as part of the CASCADE complex of that system. It shares a small N-terminal homology region with members of several other CRISPR/Cas subtypes, and we view the families that share this region as being Cas5.	2.15381e-103
NZ_CP049081.1\|WP_001290699.1\|999044_1000757_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
NZ_CP049081.1\|WP_000517476.1\|1016138_1016450_+\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	5.55235e-62

>NZ_CP049081.1|WP_001381369.1|1010290_1010575_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMLVVVTENVPPRLRGRLAIWLLEVRAGVYVGDVSAKIREMIWEQIAGLAEEGNVVMAWATNTETGFEFQTFGLNRRTPVDLDGLRLVSFLPV
>NZ_CP049081.1|WP_000220066.1|1009371_1010289_+|type-I-E-CRISPR-associated-endonuclease-Cas1
MTWLPLNPIPLKDRVSMIFLQYGQIDVIDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVRLAAQVGTLLVWVGEAGVRVYASGQPGGARSDKLLYQAKLALDEDLRLKVVRKMFELRFGEPAPARRSVEQLRGIEGSRVRATYALLAKQYGVTWNGRRYDPKDWEKGDTINQCISAATSCLYGVTEAAILAAGYAPAIGFVHTGKPLSFVYDIADIIKFDTVVPKAFEIARRNPGEPDREVRLACRDIFRSSKTLAKLIPLIEDVLAAGEIQPPAPPEDAQPVAIPLPVSLGDAGHRSS
>NZ_CP049081.1|WP_000281400.1|1008756_1009356_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSKVIIARAWSRDLYQLHQGLWHLFPNRPDAARDFLFHVEKRNTPEGCHVLLQSAQMPVSTAVATVIKTKQVEFQLQVGVPLYFRLRANPIKTILDNQKRLDSKGNIKRCRVPLIKEAEQIAWLQRKLGNAARVEDVHPISERPQYFSGDGKSGKIQTVCFEGVLTINDAPALIDLVQQGIGPAKSMGCGLLSLAPL
>NZ_CP049081.1|WP_001334996.1|1008095_1008770_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYEPVGGDIYSEESVTGHHLKFTARDEPMITLPRQFASREWYVIKGGMDVSQ
>NZ_CP049081.1|WP_000064451.1|1007001_1008093_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MSNFINIHVLISHSPSCLNRDDMNMQKDAIFGGKRRVRISSQSLKRAMRKSGYYAQNIGESSLRTIHLAQLRDVLRQKLGERFDQKIIDKTLALLSGKSVDEAEKISADAVTPWVVGEIAWFCEQVAKAEADNLDDKKLLKVLKEDIAAIRVNLQQGVDIALSGRMATSGMMTELGKVDGAMSIAHAITTHQVDSDIDWFTAVDDLQEQGSAHLGTQEFSSGVFYRYANINLAQLQENLGGASREQALEIATHVVHMLATEVPGAKQRTYAAFNPADMVMVNFSDMPLSMANAFEKAVKAKDGFLQPSIQAFNQYWDRVANGYGLNGAAAQFSLSDVDSITAQVKQMPTLEQLKSWVRNNGEA
>NZ_CP049081.1|WP_000752800.1|1006506_1006989_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MADEIDAMALYRAWQQLDNGSCAQIRRVSEPDELRDIPAFYRLVQPFGWENPRHQQALLRMVFCLSAGKNVIRHQDKKSEQTTGISLGRALANSGRINERRIFQLIRADRTADMVQLRRLLTHAEPVLDWPLMARMLTWWGKRERQQLLEDFVLTTNKNA
>NZ_CP049081.1|WP_071532149.1|1005029_1006514_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MPVRPRNGGKVQIINLQSLYCSRDQWRLSLPRDDMELAALALLVCIGQIIAPAKDDVEFRHRIMNPLTEDEFQQLIAPWIDMFYLNHAEHPFMQTKGVKANDVTPMEKLLAGVSGATNCAFVNQPGQGEALCGGCTAIALFNQANQAPGFGGGFKSGLRGGTPVTTFVRGIDLRSTVLLNVLTLPRLQKQFPNESHTENQPTWIKPIKSNESIPASSIGFVRGLFWQPAHIELCDPIGIGKCSCCGQESNLRYTGFLKEKFTFTVNGLWPHPHSPCLVTVKKGEVEEKFLAFTTSAPSWTQISRVVVDKIIQNENGNRVAAVVNQFRNIAPQSPLELIMGGYRNNQASILERRHDVLMFNQGWQQYGNVINEIVTVGLGYKTALRKALYTFAEGFKNKDFKGAGVSVHETAERHFYRQSELLIPDVLANVNFSQADEVIADLRDKLHQLCEMLFNQSVAPYAHHPKLISTLALARATLYKHLRELKPQGGPSNG
>NZ_CP049081.1|WP_000433153.1|1001924_1004591_+|CRISPR-associated-helicase/endonuclease-Cas3
MEPFKYICHYWGKSSKSLTKGNDIHLLIYHCLDVAAVADCWWDQSVVLQNTFCRNEMLSKQRVKAWLLFFIALHDIGKFDIRFQYKSAESWLKLNPATPSLNGPSTQMCRKFNHGAAGLYWFNQDSLSEQSLGDFFSFFDAAPHPYESWFPWVEAVTGHHGFILHSQDQDKSRWEMPASLASYAAQDKQAREEWISVLEALFLTPAGLSINDIPPDCSSLLAGFCSLADWLGSWTTTNTFLFNEDAPSDINALRTYFQDRQQDASRVLELSGLVSNKRCYEGVHALLDNGYQPRQLQVLVDALPVAPGLTVIEAPTGSGKTETALAYAWKLIDQQIADSVIFALPTQATANAMLTRMEASASHLFSSPNLILAHGNSRFNHLFQSIKSRAITEQGQEEAWVQCCQWLSQSNKKVFLGQIGVCTIDQVLISVLPVKHRFIRGLGIGRSVLIVDEVHAYDTYMNGLLEAVLKAQADVGGSVILLSATLPMKQKQKLLDTYGLHTDPVENNSAYPLINWRGVNGAQRFDLLAHPEQLPPRFSIQPEPIYLADMLPDLTMLERMIAAANAGAQACLICNLVDVAQVCYQRLKELNNTQVDIDLFHARFTLNDRREKENRVISNFGKNGKRNVGRILVATQVVEQSLDVDFDWLITQHCPADLLFQRLGRLHRHHRKYRPAGFEIPVATILLPDGEGYGRHEHIYSNVRVMWRTQQHIEEFNGASLFFPDAYRQWLDSIYDDAEMDEPEWVGNGMDKFESAECEKRFKARKVLQWAEEYSLQDNDETILAVTRDGEMSLPLLPYVQTSSGKQLLDGQVYEDLSHEQQYEALALNRVNVPFTWKRSFSEVVDEDGLLWLEGKQNLDGWVWQGNSIVITYTGDEGMTRVIPANPK
>NZ_CP049081.1|WP_000039850.1|1000831_1001566_+|phosphoadenosine-phosphosulfate-reductase
MSKLDLNALNELPKVDRILALAETNAELEKLDAEGRVAWALDNLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYRFIDELTDKLKLNLKVYRATESAAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQSGSRANLPVLAIQRGVFKVLPIIDWDNRTIYQYLQKHGLKYHPLWDEGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP049081.1|WP_001290699.1|999044_1000757_+|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLTDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAEQKLEPRHAMLLRCRLPGGVITTKQWQAIDKFAGENTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDDNWHLTLFIENGRILDYPARPLKTGLLEIAKIHKGDFRITANQNLIIAGVPESEKAKIEKIAKESGLMNAVTPQRENSMACVSFPTCPLAMAEAERFLPSFIDNIDNLMAKHGVSDEHIVMRVTGCPNGCGRAMLAEVGLVGKAPGRYNLHLGGNRIGTRIPRMYKENITEPEILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDLWD
>NZ_CP049081.1|WP_000490428.1|1011340_1012378_-|alkaline-phosphatase-isozyme-conversion-aminopeptidase
MFSALRHRTAALALGVCFILPVHASSPKPGDFANTQARHIATFFPGRMTGTPAEMLSADYIRQQFQQMGYRSDIRTFNSRYIYTARDNRKSWHNVTGSTVIAAHEGKAPQQIIIMAHLDTYAPLSDADADANLGGLTLQGMDDNAAGLGVMLELAERLKNTPTEYGIRFVATSGEEEGKLGAENLLKRMSDTEKKNTLLVINLDNLIVGDKLYFNSGVKTPEAVRKLTRDRALAIARSHGIAATTNPGLNKNYPKGTGCCNDAEIFDKAGIAVLSVEATNWNLGNKDGYQQRAKTPAFPAGNSWHDVRLDNHQHIDKALPGRIERRCRDVMRIMLPLVKELAKAS
>NZ_CP049081.1|WP_000372108.1|1012629_1013538_+|sulfate-adenylyltransferase-subunit-CysD
MDQIRLTHLRQLEAESIHIIREVAAEFSNPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYEFRDRTAKAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWHNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMIDDNRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESNAQTLPEIIEEMLVSTTSERQGRVIDRDQAGSMELKKRQGYF
>NZ_CP049081.1|WP_001090361.1|1013539_1014967_+|sulfate-adenylyltransferase-subunit-CysN
MNTALAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYSEETFTRIREDYLTFAGQLPGNLDIRFVPLSALEGDNVASQSESMPWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEVGQRVKVLPSGVESNVARIVTFDGDREEAFAGEAITLVLTDEIDISRGDLLLAADEALPAVQSASVDVVWMAEQPLSPGQSYDIKIAGKKTRARVDGIRYQVDINNLTQREVENLPLNGIGLVDLTFDEPLVLDRYQQNPVTGGLIFIDRLSNVTVGAGMVHEPVSQATAAPSEFSAFELELNALVRRHFPHWGARDLLGDK
>NZ_CP049081.1|WP_001173673.1|1014966_1015572_+|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVQQRELHHGHRGVVLWFTGLSGSGKSTVAGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYEAPESAEIHLNGEQLVTNLVQQLLDLLRQNDIIRS
>NZ_CP049081.1|WP_001246104.1|1015621_1015945_+|DUF3561-family-protein
MRNSHNITLTNNDSLTEDEETTWSLPGAVVGFISWLFALAMPMLIYGSNTLFFFIYTWPFFLALMPVAVVVGIALHSLMDGKLRYSIVFTLVTVGIMFGALFMWLLG
>NZ_CP049081.1|WP_000517476.1|1016138_1016450_+|cell-division-protein-FtsB
MGKLTLLLLAILVWLQYSLWFGKNGIHDYTRVNDDVAAQQATNAKLKARNDQLFAEIDDLNGGQEALEERARNELSMTRPGETFYRLVPDASKRAQSAGQNNR
>NZ_CP049081.1|WP_000246138.1|1016468_1017179_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTRTIHQENT
>NZ_CP049081.1|WP_001219242.1|1017178_1017658_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK
>NZ_CP049081.1|WP_000568943.1|1017654_1018704_+|tRNA-pseudouridine(13)-synthase-TruD
MIEFDNLTYLHGKPQGTGLLKANPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDLSAFQLEGCQVLEYARHKRKLRLGALKGNAFTLVLREVSNRDDVEQRLIDICVKGVPNYFGAQRFGIGGSNLQGAQRWAQTNTPVRDRNKRSFWLSAARSALFNQIVAERLKKADVNQVVDGDALQLAGRGSWFVATTEELAELQRRVNDKELMITAALPGSGEWGTQREALAFEQAAVAAETELQALLVREKVEAARRAMLLYPQQLSWNWWDDVTVEIRFWLPAGSFATSVVRELINTTGDYAHIAE
>NZ_CP049081.1|WP_001295182.1|1018684_1019446_+|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFENGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINVPDLPLDQIKGIRVTRCGTRHPADQVIPQQDPRGNTLYWIGPPGGKCDAGPGTDFAAVDEGYVSITPLHVDLTAHSAQDVVSDWLNSVGVGTQW

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Crispr_ID: NZ_CP049081_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP049081_3

3206473-3206599

Orphan

Consensus_repeat	Method
TTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP049081_3

>merge|NZ_CP049081|3|3206473-3206599|CRISPRCasFinder
TTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGC

>NZ_CP049081|3|3|3206473-3206599|CRISPRCasFinder
TTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGC	TCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGA
TTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP049081.1\|WP_000135040.1\|3207785_3208040_+\|ferredoxin-like-diferric-tyrosyl-radical-cofactor-maintenance-protein-YfaE	unknown	unknown	gnl\|CDD\|182668
NZ_CP049081.1\|WP_001295211.1\|3193607_3194231_-\|DUF1175-domain-containing-protein	unknown	unknown	gnl\|CDD\|225774
NZ_CP049081.1\|WP_000140472.1\|3218665_3219565_+\|ISNCY-family-transposase	unknown	unknown	gnl\|CDD\|182167
NZ_CP049081.1\|WP_000779106.1\|3211696_3212773_-\|glycerophosphodiester-phosphodiesterase	unknown	unknown	gnl\|CDD\|236859
NZ_CP049081.1\|WP_001281225.1\|3196064_3198692_-\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A	unknown	unknown	gnl\|CDD\|235502
NZ_CP049081.1\|WP_001000379.1\|3217282_3218473_+\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C	unknown	unknown	gnl\|CDD\|132422
NZ_CP049081.1\|WP_001209927.1\|3216026_3217286_+\|glycerol-3-phosphate-dehydrogenase-subunit-GlpB	unknown	unknown	gnl\|CDD\|225617
NZ_CP049081.1\|WP_000332037.1\|3206655_3207786_+\|ribonucleotide-diphosphate-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|181647
NZ_CP049081.1\|WP_001220074.1\|3199688_3203441_-\|AIDA-I-family-autotransporter-adhesin-YfaL/EhaC	unknown	unknown	gnl\|CDD\|182059
NZ_CP049081.1\|WP_000857251.1\|3214408_3216037_+\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A	unknown	unknown	gnl\|CDD\|236847
NZ_CP049081.1\|WP_000990756.1\|3198838_3199561_+\|bifunctional-2-polyprenyl-6-hydroxyphenol-methylase/3-demethylubiquinol-3-O-methyltransferase-UbiG	unknown	unknown	gnl\|CDD\|235350
NZ_CP049081.1\|WP_000948731.1\|3212777_3214136_-\|glycerol-3-phosphate-transporter	unknown	unknown	gnl\|CDD\|236889
NZ_CP049081.1\|WP_001075164.1\|3204136_3206422_+\|ribonucleoside-diphosphate-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|181649
NZ_CP049081.1\|WP_000301049.1\|3208093_3208744_-\|lipopolysaccharide-kinase-InaA	unknown	unknown	gnl\|CDD\|182136
NZ_CP049081.1\|WP_072163405.1\|3211163_3211478_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP049081.1\|WP_000580275.1\|3184027_3185350_+\|TIGR00366-family-protein	unknown	unknown	gnl\|CDD\|280776
NZ_CP049081.1\|WP_000012305.1\|3194227_3195916_-\|DUF2138-domain-containing-protein	unknown	unknown	gnl\|CDD\|227030
NZ_CP049081.1\|WP_001225852.1\|3186638_3187415_-\|YfaP-family-protein	unknown	unknown	gnl\|CDD\|227021
NZ_CP049081.1\|WP_001360244.1\|3189069_3193464_-\|alpha-2-macroglobulin-family-protein	unknown	unknown	gnl\|CDD\|225248
NZ_CP049081.1\|WP_000786547.1\|3185380_3186565_+\|acetyl-CoA-acetyltransferase	unknown	unknown	gnl\|CDD\|180261

Protein	Function_ID	Function_description	E-value
NZ_CP049081.1\|WP_000135040.1\|3207785_3208040_+\|ferredoxin-like-diferric-tyrosyl-radical-cofactor-maintenance-protein-YfaE	gnl\|CDD\|182668	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein.	2.72138e-53
NZ_CP049081.1\|WP_001295211.1\|3193607_3194231_-\|DUF1175-domain-containing-protein	gnl\|CDD\|225774	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown].	7.99004e-141
NZ_CP049081.1\|WP_000140472.1\|3218665_3219565_+\|ISNCY-family-transposase	gnl\|CDD\|182167	PRK09956, PRK09956, ISNCY family transposase.	0
NZ_CP049081.1\|WP_000779106.1\|3211696_3212773_-\|glycerophosphodiester-phosphodiesterase	gnl\|CDD\|236859	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional.	0
NZ_CP049081.1\|WP_001281225.1\|3196064_3198692_-\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A	gnl\|CDD\|235502	PRK05560, PRK05560, DNA gyrase subunit A; Validated.	0
NZ_CP049081.1\|WP_001000379.1\|3217282_3218473_+\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C	gnl\|CDD\|132422	TIGR03379, glycerol3P_GlpC, glycerol-3-phosphate dehydrogenase, anaerobic, C subunit. Members of this protein family are the membrane-anchoring, non-catalytic C subunit, product of the glpC gene, of a three-subunit, FAD-dependent, anaerobic glycerol-3-phosphate dehydrogenase. GlpC lasks classical hydrophobic transmembrane helices; Cole, et al suggest interaction with the membrane may involve amphipathic helices. GlcC has conserved Cys-containing motifs suggestive of iron-sulfur binding. This complex is found mostly in Escherichia coli and closely related species. [Energy metabolism, Anaerobic].	0
NZ_CP049081.1\|WP_001209927.1\|3216026_3217286_+\|glycerol-3-phosphate-dehydrogenase-subunit-GlpB	gnl\|CDD\|225617	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism].	0
NZ_CP049081.1\|WP_000332037.1\|3206655_3207786_+\|ribonucleotide-diphosphate-reductase-subunit-beta	gnl\|CDD\|181647	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed.	0
NZ_CP049081.1\|WP_001220074.1\|3199688_3203441_-\|AIDA-I-family-autotransporter-adhesin-YfaL/EhaC	gnl\|CDD\|182059	PRK09752, PRK09752, AIDA-I family autotransporter YfaL.	0
NZ_CP049081.1\|WP_000857251.1\|3214408_3216037_+\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A	gnl\|CDD\|236847	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A.	0
NZ_CP049081.1\|WP_000990756.1\|3198838_3199561_+\|bifunctional-2-polyprenyl-6-hydroxyphenol-methylase/3-demethylubiquinol-3-O-methyltransferase-UbiG	gnl\|CDD\|235350	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG.	9.80223e-171
NZ_CP049081.1\|WP_000948731.1\|3212777_3214136_-\|glycerol-3-phosphate-transporter	gnl\|CDD\|236889	PRK11273, glpT, glycerol-3-phosphate transporter.	0
NZ_CP049081.1\|WP_001075164.1\|3204136_3206422_+\|ribonucleoside-diphosphate-reductase-subunit-alpha	gnl\|CDD\|181649	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha.	0
NZ_CP049081.1\|WP_000301049.1\|3208093_3208744_-\|lipopolysaccharide-kinase-InaA	gnl\|CDD\|182136	PRK09902, PRK09902, lipopolysaccharide kinase InaA.	1.43283e-158
NZ_CP049081.1\|WP_000580275.1\|3184027_3185350_+\|TIGR00366-family-protein	gnl\|CDD\|280776	pfam02667, SCFA_trans, Short chain fatty acid transporter. This family consists of two sequences annotated as short chain fatty acid transporters, however, there are no references giving details of experimental characterization of this function.	0
NZ_CP049081.1\|WP_000012305.1\|3194227_3195916_-\|DUF2138-domain-containing-protein	gnl\|CDD\|227030	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown].	0
NZ_CP049081.1\|WP_001225852.1\|3186638_3187415_-\|YfaP-family-protein	gnl\|CDD\|227021	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown].	4.17009e-153
NZ_CP049081.1\|WP_001360244.1\|3189069_3193464_-\|alpha-2-macroglobulin-family-protein	gnl\|CDD\|225248	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only].	0
NZ_CP049081.1\|WP_000786547.1\|3185380_3186565_+\|acetyl-CoA-acetyltransferase	gnl\|CDD\|180261	PRK05790, PRK05790, putative acyltransferase; Provisional.	0

>NZ_CP049081.1|WP_001075164.1|3204136_3206422_+|ribonucleoside-diphosphate-reductase-subunit-alpha
MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESGACKI
>NZ_CP049081.1|WP_001220074.1|3199688_3203441_-|AIDA-I-family-autotransporter-adhesin-YfaL/EhaC
MRIIFLRKEYLSLLPSMIASLFSANGVAAVTDSCQGYDVKASCQASRQSLSGITQDWSIADGQWLVFSDMTNNASGGAVFLQQGAEFSLLPENETGMTLFANNTVTGEYNNGGAIFAKENSTLNLTDVIFSGNVAGGYGGAIYSSGTNDTGAVDLRVTNAMFRNNIANDGKGGAIYTINNDVYLSDVIFDNNQAYTSTSYSDGDGGAIDVTDNNSDSKHPSGYTIVNNTAFTNNTAEGYGGAIYTNSVTAPYLIDISVDDSYSQNGGVLVDENNSAAGYGDGPSSAAGGFMYLGLSEVTFDIADGKTLVIGNTENDGAVDSIAGTGLITKTGSGDLVLNADNNDFTGEMQIENGEVTLGRSNSLMNVGDTHCQDDPQDCYGLTIGSIDQYQNQAELNVGSTQQTFVHALTGFQNGTLNIDAGGNVTVNQGSFAGIIEGAGQLTIAQNGSYVLAGAQSMALTGDIVVDDGAVLSLEGDAADLTALQDDPQSIVLNGGVLDLSDFSTWQSGTSYNDGLEVSGSSGTVIGSQDVVDLAGGDNLHIGGDGKDGVYVVVDASDGQVSLANNNSYLGTTQIASGTLMVSDNSQLGDTHYNRQVIFTDKQQESVMEITSDVDTRSDAAGHGRDIEMRADGEVAVDAGVDTQWGALMADSSGQHQDEGSTLTKTGAGTLELTASGTTQSAVRVEEGTLKGDVADILPYASSLWVGDGATFVTGADQDIQSIDAISSGTIDISDGTVLRLTGQDTSVALNASLFNGDGTLVNATDGVTLTGELNTNLETDSLTYLSNVTVNGNLTNTSGAVSLQNGVAGDTLTVNGDYTGGGTLLLDSELNGDDSVSDQLVMNGNTAGNTTVVVNSITGIGEPTSTGIKMVDFAADPTQFQNNAQFSLAGSGYVNMGAYDYTLVEDNNDWYLRSQEVTPPSPPDPDPTPDPDPTPDPDPTPDPEPTPAYQPVLNAKVGGYLNNLRAANQAFMMERRDHAGGDGQTLNLRVIGGDYHYTAAGQLAQHEDTSTVQLSGDLFSGRWGTDGEWMLGIVGGYSDNQGDSRSNMTGTRADNQNHGYAVGLTSSWFQHGNQKQGAWLDSWLQYAWFSNDVSEQEDGTDHYHSSGIIASLEAGYQWLPGRGVVIEPQAQVIYQGVQQDDFTAANRARVSQSQGDDIQTRLGLHSEWRTAVHVIPTLDLNYYHDPHSTEIEEDGSTISDDAVKQRGEIKVGVTGNISQRVSLRGSVAWQKGSDDFAQTAGFLSMTVKW
>NZ_CP049081.1|WP_000990756.1|3198838_3199561_+|bifunctional-2-polyprenyl-6-hydroxyphenol-methylase/3-demethylubiquinol-3-O-methyltransferase-UbiG
MNAEKSPENHNVDHEEIAKFEAVASRWWDLEGEFKPLHRINPLRLGYIAERAGGLFGKKVLDVGCGGGILAESMAREGATVTGLDMGFEPLQVAKLHALESGIQVDYVQETVEKHAAKHAGQYDVVTCMEMLEHVPDPQSVVRACAQLVKPGGDVFFSTLNRNGKSWLMAVVGAEYILRMVPKGTHDVKKFIKPAELLGWVDQTSLKERHITGLHYNPITNSFKLGPGVDVNYMLHTQNK
>NZ_CP049081.1|WP_001281225.1|3196064_3198692_-|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A
MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWNKAYKKSARVVGDVIGKYHPHGDLAVYNTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMATNIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKVYIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDGMRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRREVVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNVAAMLERAGDDAARPEWLEPEFGVRDGLYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKELLDQIAELLRILGSADRLMEVIREELELVREQFGDKRRTEITANSADINLEDLITQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAEDENVVGLQRVAEPVDEEDLDTIDGSAAEGDDEIAPEVDVDDEPEEE
>NZ_CP049081.1|WP_000012305.1|3194227_3195916_-|DUF2138-domain-containing-protein
MSGEKKAKGWRFYGLVGFGAIALLSAGVWALQYAGSGPEKTLSPLVVHNNLQIDLNEPDLFLDSDSLSQLPKDLLTIPFLHDVLSEDFVFYYQNHADRLGIEGSIRRIVYEHDLTLKDKLFSSLLDQPAQAALWHDKQGHLSHYMVLIQRSGLSKLLEPLLFAATSDSQLSKTEISSIKINSETVPVYQLRYNGNNALMFATYQDKMLVFSSTDMLFKDDQQDTEATAIAGDLLSGKKRWQASFGLEERTAEKTPVRQRIVVSARWLGFGYQRLMPSFAGVRFEMGNDGWHSFVALNDESASVDASFDFTPVWNSMPAGASFCVAVPYSHGIAEEMLSHISQENDKLNGALDGAAGLCWYEDSKLQTPLFVGQFDGTAEQAQLPGKLFTQNIGAHESKAPEGVLPVSQTQQGEAQIWRREVSSRYGQYPKAQAAQPDQLMSDYFFRVSLAMQNKTLLFSLDDTLVNNALQTLNKTRPAMVDVIPTDGIVPLYINPQGIAKLLRNETLTSLPKNLEPVFYNAAQTLLMPKLDALSQQPRYVMKLAQMEPGAAWQWLPITWQPL
>NZ_CP049081.1|WP_001295211.1|3193607_3194231_-|DUF1175-domain-containing-protein
MRHGLLALICWLCCVVAHSEMLNVEQSGLFRAWFVRIAQEQLRQGPSPRWYQQDCAGLVRFAANETLKVHDSKWLKSNGLSSQYLPPEMTLTPEQRQLAQNWNQGNGKTGPYVTAINLIQYNSQFIGQDINQALPGDMIFFDQGDAQHLMVWMGRYVIYHTGSATKTDNGMRAVSLQQLMTWKDTRWIPNDSNPNFIGIYRLNFLAR
>NZ_CP049081.1|WP_001360244.1|3189069_3193464_-|alpha-2-macroglobulin-family-protein
MRLEAPGRDYRRYQMEEYGGVDVRLYRIPDPMAFLRQQKNLHRIVVQPQYLGDGLNNTLTWLWDNWYGKSRRVMQRTFSSQSRQNVTQALPELQLGNAIIKPSRYVQNNQFSPLKKYPLVKQFRYPLWQAKPFEPQQGVKLEGASSNFISPQPGNIYIPLGQQEPGLYLVEAMVGGYRATTVVFVSDTVALSKVSGKELLVWTAGKKQGEAKPGSEILWTDGLGVMTRGVTDDSGTLQLQHISPERSYILGKDAEGGVFVSENFFYESEIYNTRLYIFTDRPLYRAGDRVDVKVIGREFHDPLHSSPIVSAPAKLSVLDANGSLLQTVNVTLDARNGGQGSFRLPENAVAGGYELRLAYRNQVYSSSFRVANYIKPHFEIGLALAKKEFKTGEAVSGKLQLLYPDGEPVKNARVQLSLRAQQLSMVGNDLRYAGRFPVSLEGSETVSDASGHVALNLPAADKPSRYLLTVSASDGAAYRVTTTKEILIERGLAHYSLSTAAQYSNSGESVVFRYAALESSKQVPVTYEWLRLEDRTSHSGELPSGGKSFTVNFAKPGNYNLTLRDKDGLILAGLSHAVSGKGSTAHTGTVDIVADKTLYQPGETAKMLITFPEPIDEALLTLERDRVEQQSLLSHPANWLTLQRLNDTQYEARVPVSNSFAPNITFSVLYTRNGQYSFQNAGIKVAVPQLDIRVKTDKTHYQPGELVNVELTSSLKGKPVSAQLTVGVVDEMIYALQPEIAPNIGKFFYPLGRNNVRTSSSLSFISYDQALSSEPVAPGATNRSERRVKMLERPRREEVDTAAWMPSLTTDKQGKAYFTFLMPDSLTRWRITARGMNGDGLVGQGRAYLRSEKNLYMKWSMPTVYRVGDKPAAGLFIFSQQDNEPVALVTKFAGAEMRQTLTLHKGANYISLTQNIQQSGLLSAELQQNGQVQDSISTKLSFVDNSWPVEQQKNVMLGGGDNALMLPEQASNIRLQSSETPQEIFRNNLDALVDEPWGGVINTGSRLIPLSLAWRSLADHQSAAANDIRQMIQDNRLRLMQLAGPGARFTWWGEDGNGDAFLTAWAWYADWQASQAIGVTQQPEYWQHMLDSYAEQADNMPLLHRALVLAWAQEMNLPCKTLLKGLDEAIARRGTKTEDFSEEDTRDINDSLILDTPESPLADAVANVLTMTLLKKAQLKSTVMPQVQQYAWDKAANSNQPLAHTVVLLNSGGDATQTAAILSGLTAEQSTIERALAMNWLAKYMATMPPVVLPAPAGAWAKHKLTGGGEDWRWVGQGVPDILSFGDELSPQNVQVRWREPAKMAQQSNIPVTVERQLYRLIPGEEEMSFILQPVTSNEIDSDALYLDEITLTSEQDAVLRYGQVEVPLPPGADVERTTWGISVNKPNAAKQQGQLLEKARNEMGELAYMVPVKELTGTVTFRHLLRFSQKGQFVLPPARYVRSYAPAQQSVAAGSEWTGMQVK
>NZ_CP049081.1|WP_001225852.1|3186638_3187415_-|YfaP-family-protein
MRKIFLPLLLVALSPVAHSEGVQEVEIDAPLSGWHPAEGEDASFSQSINYPASSVNMADDQNISAQIRGKIKNYAAAGKVQQGRLVVNGASMPQRIESDGSFARPYIFTEGSNSVQVISPDGQSRQKMQFYSTPGTGTIRARLRLVLSWDTDNTDLDLHVVTPDGEHAWYGNTVLKNSGALDMDVTTGYGPEIFAMPAPIHGRYQVYINYYGGRSETELTTAQLTLITDEGSVNEKQETFIVPMRNAGELTLVKSFDW
>NZ_CP049081.1|WP_000786547.1|3185380_3186565_+|acetyl-CoA-acetyltransferase
MKNCVIVSAVRTAIGSFNGSLASTSAIDLGATVIKAAIERAKIDSQHVDEVIMGNVLQAGLGQNPARQALLKSGLAETVCGFTVNKVCGSGLKSVALAAQAIQAGQAQSIVAGGMENMSLAPYLLDAKARSGYRLGDGQVYDVILRDGLMCATHGYHMGITAENVAKEYGITREMQDELALHSQRKAAAAIESGAFTAEIVPVNVVTRKKTFVFSQDEFPKANSTAEALGALRPAFDKAGTVTAGNASGINDGAAALVIMEESAALAAGLTPLARIKSYASGGVPPALMGMGPVPATQKALQLAGLQLADIDLIEANEAFAAQFLAVGKNLGFDSEKVNVNGGAIALGHPIGASGARILVTLLHAMQARDKTLGLATLCIGGGQGIAMVIERLN
>NZ_CP049081.1|WP_000580275.1|3184027_3185350_+|TIGR00366-family-protein
MIGRISRFMTRFVSRWLPDPLIFAMLLTLLTFVIALWLTPQTPISMVKMWGDGFWNLLAFGMQMALIIVTGHALASSAPVKSLLRTAASAAKTPVQGVMLVTFFGSVACVINWGFGLVVGAMFAREVARRVPGSDYPLLIACAYIGFLTWGGGFSGSMPLLAATPGNPVEHIAGLIPVGDTLFSGFNIFITVALIVVMPFITRMMMPKPSDVVSIDPKLLMEEADFQKQLPKDAPPSERLEESRILTLIIGALGIAYLAMYFSEHGFNITINTVNLMFMIAGLLLHKTPMAYMRAISAAARSTAGILVQFPFYAGIQLMMEHSGLGGLITEFFINVANKDTFPVMTFFSSALINFAVPSGGGHWVIQGPFVIPAAQALGADLGKSVMAIAYGEQWMNMAQPFWALPALAIAGLGVRDIMGYCITALLFSGVIFVIGLTLF
>NZ_CP049081.1|WP_000332037.1|3206655_3207786_+|ribonucleotide-diphosphate-reductase-subunit-beta
MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLSNFQL
>NZ_CP049081.1|WP_000135040.1|3207785_3208040_+|ferredoxin-like-diferric-tyrosyl-radical-cofactor-maintenance-protein-YfaE
MARVTLRITGTQLLCQDEHPSLLAALESHNVAVEYQCREGYCGSCRTRLVAGQVDWIAEPLAFIQPGEILPCCCRAKGDIEIEM
>NZ_CP049081.1|WP_000301049.1|3208093_3208744_-|lipopolysaccharide-kinase-InaA
MAVSAKYDEFNHWWATEGDWVEEPNYRRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSINRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRRRLRRDKAINHDFRQLEKYLEPIPKADWEQVKAYYYAM
>NZ_CP049081.1|WP_072163405.1|3211163_3211478_+|hypothetical-protein
MTNKLGGELIDIADKKLAPLINDSFSYTRDFFAYSKQENNIFTFDNSKFVDPKEKEGLMIQHSNGQLVITGKYCPEGVQTAFTQEQYDKLIRYINIFFTFPKCE
>NZ_CP049081.1|WP_000779106.1|3211696_3212773_-|glycerophosphodiester-phosphodiesterase
MKLTLKNLSMAIMMSTIVMGSSAMAADSNEKIVIAHRGASGYLPEHTLPAKAMAYAQGADYLEQDLVMTKDDNLVVLHDHYLDRVTDVADRFPDRARKDGRYYAIDFTLDEIKSLKFTEGFDIENGKKVQTYPGRFPMGKSDFRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRIKNELEPKMGMELNLVQLIAYTDWNETQQKQPDGSWVNYNYDWMFKPGAMKQVAEYADGIGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHPYTVRSDKLPEYTTDVNQLYDVLYNKAGVNGLFTDFPDKAVKFLNKE
>NZ_CP049081.1|WP_000948731.1|3212777_3214136_-|glycerol-3-phosphate-transporter
MLSIFKPAPHKARLPAAEIDPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQERNGG
>NZ_CP049081.1|WP_000857251.1|3214408_3216037_+|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A
MKTRDSQSSDVIIIGGGATGAGIARDCALRGLRVILVERHDIATGATGRNHGLLHSGARYAVTDAESARECISENQILKRIARHCVEPTNGLFITLPEDDLSFQATFIRACEEAGISAEAIDPQQARIIEPAVNPALIGAVKVPDGTVDPFRLTAANMLDAKEHGAVILTAHEVTGLIREGATVCGVRVRNHLTGETQALHAPVVVNAAGIWGQHIAEYADLRIRMFPAKGSLLIMDHRINQHVINRCRKPSDADILVPGDTISLIGTTSLRIDYNEIDDNRVTAEEVDILLREGEKLAPVMAKTRILRAYSGVRPLVASDDDPSGRNVSRGIVLLDHAERDGLDGFITITGGKLMTYRLMAEWATDAVCRKLGNTRPCTTADLALPGSQDPAEVTLRKVISLPAPLRGSAVYRHGDRTPAWLSEGRLHRSLVCECEAVTAGEVQYAVENLNVNSLLDLRRRTRVGMGTCQGELCACRAAGLLQRFNVTTSAQSIEQLSTFLNERWKGVQPIAWGDALRESEFTRWVYQGLCGLEKEQKDAL
>NZ_CP049081.1|WP_001209927.1|3216026_3217286_+|glycerol-3-phosphate-dehydrogenase-subunit-GlpB
MRFDTVIMGGGLAGLLCGLQLQKHGLRCAIVTRGQSALHFSSGSLDLLSHLPDGQPVTDIHSGLESLRQQAPAHPYSLLEPQRVLDLACQAQALIAESGAQLQGSVELAHQRVTPLGTLRSTWLSSPEVPVWPLPAKKICVVGISGLMDFQAHLAAASLRELGLAVETAEIELPELDVLRNNATEFRAVNIARFLDNEENWPLLLDALIPVANTCEMILMPACFGLADDKLWRWLNEKLPCSLMLLPTLPPSVLGIRLQNQLQRQFVRQGGVWMPGDEVKKVTCKNGVVNEIWTRNHADIPLRPRFAVLASGSFFSGGLVAERNGIREPILGLDVLQTATRGEWYKGDFFAPQPWQQFGVTTDETLRPSQAGQTIENLFAIGSVLGGFDPIAQGCGGGVCAVSALHAAQQIAQRAGGQQ
>NZ_CP049081.1|WP_001000379.1|3217282_3218473_+|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C
MNDTSFENCIKCTVCTTACPVSRVNPGYPGPKQAGPDGERLRLKDGALYDEALKYCINCKRCEVACPSDVKIGDIIQRARAKYDTTRPSLRNFVLSHTDLMGSVSTPFAPIVNTATSLKPVRQLLDAALKIDHRRTLPKYSFGTFRRWYRSVAAQQAQYKDQVAFFHGCFVNYNHPQLGKDLIKVLNAMGTGVQLLSKEKCCGVPLIANGFTDKARKQAITNVESIREAVGVKGIPVIATSSTCTFALRDEYPEVLNVDNKGLRDHIELATRWLWRKLDEGKTLPLKPLPLKVVYHTPCHMEKMGWTLYTLELLRNIPGLELTVLDSQCCGIAGTYGFKKENYPTSQAIGAPLFRQIEESGADLVVTDCETCKWQIEMSTSLRCEHPITLLAQALA
>NZ_CP049081.1|WP_000140472.1|3218665_3219565_+|ISNCY-family-transposase
MTESTASSPHDAVFKTFMFTPETARDFLEIHLPEPLRKLCNLQTLRLEPTSFIEKSLRAYYSDVLWSVETSDGDGYIYCVIEHQSSAEKNMAFRLMRYATAAMQRHLDKGYDRVPLVVPLLFYHGETSPYPYSLNWLDEFDDPQLARQLYTEAFPLVDITIVPDDEIMQHRRIALLELIQKHIRDRDLIGMVDRITTLLVRGFTNDSQLQTLFNYLLQCGDTSRFTRFIEEIAERSPLQKERLMTIAERLRQEGHQIGWQEGMHEQAIKIALRMLEQGFEREIVLATTQLTDADIPNCH

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Crispr_ID: NZ_CP049081_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP049081_4

3358828-3358924

Orphan

Consensus_repeat	Method
TTGTAGGCCTGATAAGATGCGTCAAGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP049081_4

>merge|NZ_CP049081|4|3358828-3358924|CRISPRCasFinder
TTGTAGGCCTGATAAGATGCGTCAAGCATCGCATCAGGCATTGTGCACCAATTGCCGGATGCGGCACCGGTTGTAGGCCTGATAAGACGCGTCAAGC

>NZ_CP049081|4|4|3358828-3358924|CRISPRCasFinder
TTGTAGGCCTGATAAGATGCGTCAAGC	ATCGCATCAGGCATTGTGCACCAATTGCCGGATGCGGCACCGG
TTGTAGGCCTGATAAGACGCGTCAAGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP049081.1\|WP_001310618.1\|3364997_3366233_+\|allantoate-deiminase	unknown	unknown	gnl\|CDD\|274471
NZ_CP049081.1\|WP_000152519.1\|3359847_3360663_-\|DUF2877-domain-containing-protein	unknown	unknown	gnl\|CDD\|378658
NZ_CP049081.1\|WP_000912385.1\|3354293_3355679_-\|cysteine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234705
NZ_CP049081.1\|WP_000703900.1\|3363926_3364976_+\|ureidoglycolate-dehydrogenase	unknown	unknown	gnl\|CDD\|184985
NZ_CP049081.1\|WP_001096881.1\|3369606_3371388_-\|glyoxylate-carboligase	unknown	unknown	gnl\|CDD\|183066
NZ_CP049081.1\|WP_000943544.1\|3368817_3369594_-\|hydroxypyruvate-isomerase	unknown	unknown	gnl\|CDD\|182188
NZ_CP049081.1\|WP_000815571.1\|3357695_3358763_+\|5-(carboxyamino)imidazole-ribonucleotide-synthase	unknown	unknown	gnl\|CDD\|235674
NZ_CP049081.1\|WP_001143542.1\|3353736_3354258_+\|metal-dependent-hydrolase	unknown	unknown	gnl\|CDD\|224899
NZ_CP049081.1\|WP_000540997.1\|3366243_3367029_+\|(S)-ureidoglycine-aminohydrolase	unknown	unknown	gnl\|CDD\|200251
NZ_CP049081.1\|WP_000495367.1\|3360673_3361933_-\|DUF1116-domain-containing-protein	unknown	unknown	gnl\|CDD\|377673
NZ_CP049081.1\|WP_000988364.1\|3350623_3351316_-\|type-1-fimbria-chaperone-FimC	unknown	unknown	gnl\|CDD\|185117
NZ_CP049081.1\|WP_000190288.1\|3353416_3353629_+\|ribosome-associated-protein-YbcJ	unknown	unknown	gnl\|CDD\|183166
NZ_CP049081.1\|WP_000580822.1\|3361942_3363610_-\|acyl-CoA-synthetase-FdrA	unknown	unknown	gnl\|CDD\|180395
NZ_CP049081.1\|WP_000255997.1\|3355852_3356347_+\|peptidylprolyl-isomerase-B	unknown	unknown	gnl\|CDD\|182734
NZ_CP049081.1\|WP_000212247.1\|3356349_3357072_+\|UDP-2,3-diacylglucosamine-diphosphatase	unknown	unknown	gnl\|CDD\|235420
NZ_CP049081.1\|WP_001295318.1\|3357189_3357699_+\|5-(carboxyamino)imidazole-ribonucleotide-mutase	unknown	unknown	gnl\|CDD\|223119
NZ_CP049081.1\|WP_000141275.1\|3371477_3372293_-\|HTH-type-transcriptional-repressor-AllR	unknown	unknown	gnl\|CDD\|182279
NZ_CP049081.1\|WP_000729160.1\|3352548_3353415_+\|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase-FolD	unknown	unknown	gnl\|CDD\|236760
NZ_CP049081.1\|WP_000855378.1\|3358957_3359851_-\|carbamate-kinase	unknown	unknown	gnl\|CDD\|181831
NZ_CP049081.1\|WP_000776555.1\|3351535_3352078_-\|type-1-fimbrial-protein-subunit-FimA	unknown	unknown	gnl\|CDD\|237920

Protein	Function_ID	Function_description	E-value
NZ_CP049081.1\|WP_001310618.1\|3364997_3366233_+\|allantoate-deiminase	gnl\|CDD\|274471	TIGR03176, AllC, allantoate amidohydrolase. This enzyme catalyzes the breakdown of allantoate, first to ureidoglycine by hydrolysis and then decarboxylation of one of the two equivalent ureido groups. Ureidoglycine then spontaneously exchanges ammonia for water resulting in ureidoglycolate. This enzyme is an alternative to allantoicase (3.5.3.4) which releases urea. [Central intermediary metabolism, Nitrogen metabolism].	0
NZ_CP049081.1\|WP_000152519.1\|3359847_3360663_-\|DUF2877-domain-containing-protein	gnl\|CDD\|378658	pfam11392, DUF2877, Protein of unknown function (DUF2877). This bacterial family of proteins are putative carboxylase proteins however this cannot be confirmed.	3.47659e-37
NZ_CP049081.1\|WP_000912385.1\|3354293_3355679_-\|cysteine--tRNA-ligase	gnl\|CDD\|234705	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated.	0
NZ_CP049081.1\|WP_000703900.1\|3363926_3364976_+\|ureidoglycolate-dehydrogenase	gnl\|CDD\|184985	PRK15025, PRK15025, ureidoglycolate dehydrogenase; Provisional.	0
NZ_CP049081.1\|WP_001096881.1\|3369606_3371388_-\|glyoxylate-carboligase	gnl\|CDD\|183066	PRK11269, PRK11269, glyoxylate carboligase; Provisional.	0
NZ_CP049081.1\|WP_000943544.1\|3368817_3369594_-\|hydroxypyruvate-isomerase	gnl\|CDD\|182188	PRK09997, PRK09997, hydroxypyruvate isomerase; Provisional.	0
NZ_CP049081.1\|WP_000815571.1\|3357695_3358763_+\|5-(carboxyamino)imidazole-ribonucleotide-synthase	gnl\|CDD\|235674	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed.	2.50904e-178
NZ_CP049081.1\|WP_001143542.1\|3353736_3354258_+\|metal-dependent-hydrolase	gnl\|CDD\|224899	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only].	4.92496e-31
NZ_CP049081.1\|WP_000540997.1\|3366243_3367029_+\|(S)-ureidoglycine-aminohydrolase	gnl\|CDD\|200251	TIGR03214, ura-cupin, putative allantoin catabolism protein. This model represents a protein containing a tandem arrangement of cupin domains (N-terminal part of pfam07883 and C-terminal more distantly related to pfam00190). This protein is found in the vicinity of genes involved in the catabolism of allantoin, a breakdown product of urate and sometimes of urate iteslf. The distribution of pathway components in the genomes in which this family is observed suggests that the function is linked to the allantoate catabolism to glyoxylate pathway (GenProp0686) since it is sometimes found in genomes lacking any elements of the xanthine-to-allantoin pathways (e.g. in Enterococcus faecalis).	2.39799e-151
NZ_CP049081.1\|WP_000495367.1\|3360673_3361933_-\|DUF1116-domain-containing-protein	gnl\|CDD\|377673	pfam06545, DUF1116, Protein of unknown function (DUF1116). This family contains hypothetical bacterial proteins of unknown function.	1.27269e-131
NZ_CP049081.1\|WP_000988364.1\|3350623_3351316_-\|type-1-fimbria-chaperone-FimC	gnl\|CDD\|185117	PRK15195, PRK15195, molecular chaperone FimC.	4.4332e-149
NZ_CP049081.1\|WP_000190288.1\|3353416_3353629_+\|ribosome-associated-protein-YbcJ	gnl\|CDD\|183166	PRK11507, PRK11507, ribosome-associated protein YbcJ.	1.38756e-42
NZ_CP049081.1\|WP_000580822.1\|3361942_3363610_-\|acyl-CoA-synthetase-FdrA	gnl\|CDD\|180395	PRK06091, PRK06091, membrane protein FdrA; Validated.	0
NZ_CP049081.1\|WP_000255997.1\|3355852_3356347_+\|peptidylprolyl-isomerase-B	gnl\|CDD\|182734	PRK10791, PRK10791, peptidylprolyl isomerase B.	9.12357e-121
NZ_CP049081.1\|WP_000212247.1\|3356349_3357072_+\|UDP-2,3-diacylglucosamine-diphosphatase	gnl\|CDD\|235420	PRK05340, PRK05340, UDP-2,3-diacylglucosamine hydrolase; Provisional.	2.41122e-165
NZ_CP049081.1\|WP_001295318.1\|3357189_3357699_+\|5-(carboxyamino)imidazole-ribonucleotide-mutase	gnl\|CDD\|223119	COG0041, PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism].	1.14024e-91
NZ_CP049081.1\|WP_000141275.1\|3371477_3372293_-\|HTH-type-transcriptional-repressor-AllR	gnl\|CDD\|182279	PRK10163, PRK10163, HTH-type transcriptional repressor AllR.	0
NZ_CP049081.1\|WP_000729160.1\|3352548_3353415_+\|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase-FolD	gnl\|CDD\|236760	PRK10792, PRK10792, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD.	0
NZ_CP049081.1\|WP_000855378.1\|3358957_3359851_-\|carbamate-kinase	gnl\|CDD\|181831	PRK09411, PRK09411, carbamate kinase; Reviewed.	0
NZ_CP049081.1\|WP_000776555.1\|3351535_3352078_-\|type-1-fimbrial-protein-subunit-FimA	gnl\|CDD\|237920	PRK15194, PRK15194, type 1 fimbrial protein subunit FimA.	9.67411e-92

>NZ_CP049081.1|WP_000815571.1|3357695_3358763_+|5-(carboxyamino)imidazole-ribonucleotide-synthase
MKQVCVLGNGQLGRMLRQAGEPLGIAVWPVGLDAEPAAVPFQQSVITAEIERWPETALTRELARHPAFVNRDVFPIIADRLTQKQLFDKLHLPTAPWQLLAERSEWPAVFDRLGELAIVKRRTGGYDGRGQWRLRANETEQLPAECYGECIVEQGINFSGEVSLVGARGFDGSTVFYPLTHNLHQDGILRTSVAFPQANAQQQAQAEEMLSAIMQELGYVGVMAMECFVTPQGLLINELAPRVHNSGHWTQNGASISQFELHLRAITDLPLPQPVVNNPSVMINLIGSDVNYDWLKLPLVHLHWYDKEVRPGRKVGHLNLTDSDTSRLTATLEALIPLLPPEYASGVIWAQSKFG
>NZ_CP049081.1|WP_001295318.1|3357189_3357699_+|5-(carboxyamino)imidazole-ribonucleotide-mutase
MSSRNNPARVAIVMGSKSDWATMQFAAEIFEILNVPHHVEVVSAHRTPDKLFSFAESAEENGYQVIIAGAGGAAHLPGMIAAKTLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLAIGKAGAANAALLAAQILATHDKELHQRLNDWRKAQTDEVLENPDPRGAA
>NZ_CP049081.1|WP_000212247.1|3356349_3357072_+|UDP-2,3-diacylglucosamine-diphosphatase
MATLFIADLHLCVEEPAITAGFLRFLAGEARKADALYILGDLFEAWIGDDDPNPLHRKMAAAIKAVSDSGVPCYFIHGNRDFLLGKRFARESGMTLLPEEKVLELYGRRVLIMHGDTLCTDDAGYQAFRAKVHKPWLQTLFLALPLFVRKRIAARMRANSKEANSSKSLAIMDVNQNAVVSAMEKHQVQWLIHGHTHRPAVHELIANQQPAFRVVLGAWHTEGSMVKVTADDVELIHFPF
>NZ_CP049081.1|WP_000255997.1|3355852_3356347_+|peptidylprolyl-isomerase-B
MVTFHTNHGDIVIKTFDDKAPETVKNFLDYCREGFYNNTIFHRVINGFMIQGGGFEPGMKQKATKEPIKNEANNGLKNTRGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYCVFAEVVDGMDVVDKIKGVATGRSGMHQDVPKEDVIIESVTVSE
>NZ_CP049081.1|WP_000912385.1|3354293_3355679_-|cysteine--tRNA-ligase
MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKLKYVRNITDIDDKIIKRANENGESFVAMVDRMIAEMHKDFDALNILRPDMEPRATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTTWRRK
>NZ_CP049081.1|WP_001143542.1|3353736_3354258_+|metal-dependent-hydrolase
MPTVITHAAVPLCIGLGLGSKVIPPRLLFAGIILAMLPDADVLSFKFGVAYGNVFGHRGFTHSLVFAFVVPLLCVFIGRRWFRAGLIRCWLFLTVSLLSHSLLDSVTTGGKGVGWLWPWSDERFFAPWQVIKVAPFALSRYTTPYGHQVIISELMWVWLPGMLLMGMLWWRRR
>NZ_CP049081.1|WP_000190288.1|3353416_3353629_+|ribosome-associated-protein-YbcJ
MATFSLGKHPHVELCDLLKLEGWSESGAQAKIAIAEGQVKVDGAVETRKRCKIVAGQTVSFAGHSVQVVA
>NZ_CP049081.1|WP_000729160.1|3352548_3353415_+|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase-FolD
MAAKIIDGKTIAQQVRSEVAQKVQARIAAGLRAPGLAVVLVGSNPASQIYVASKRKACEEVGFVSRSYDLPETTSEAELLELIDTLNADNTIDGILVQLPLPAGIDNVKVLERIHPDKDVDGFHPYNVGRLCQRAPRLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVENADLLIVAVGKPGFIPGDWIKEGAIVIDVGINRLENGKVVGDVVFEDAAKRASYITPVPGGVGPMTVATLIENTLQACVEYHDPQDE
>NZ_CP049081.1|WP_000776555.1|3351535_3352078_-|type-1-fimbrial-protein-subunit-FimA
MKLRFISSALAAALFAATGSYAAVVDGGTIHFEGELVNAACSVNTDSADQVVTLGQYRTDIFNAVGNTSALIPFTIQLNDCDPVVAANAAVAFSGQADAINDNLLAIASSTNTTTATGVGIEILDNTSAILKPDGNSFSTNQNLIPGTNVLHFSARYKGTGTSASAGQANADATFIMRYE
>NZ_CP049081.1|WP_000988364.1|3350623_3351316_-|type-1-fimbria-chaperone-FimC
MMTKIKLLMLIIFYLIISASAHAAGGIALGATRIIYPADAKQTAVWIRNSHTNERFLVNSWIENSSGVKEKSFIITPPLFVSEPKSENTLRIIYTGPPLAADRESLFWMNVKTIPSVDKNALNGRNVLQLAILSRMKLFLRPIQLQELPAEAPDTLKFSRSGNYINVHNPSPFYVTLVNLQVGSQKLGNAMAAPRVNSQIPLPSGVQGKLKFQTVNDYGSVTPVREVNLN
>NZ_CP049081.1|WP_000855378.1|3358957_3359851_-|carbamate-kinase
MKTLVVALGGNALLQRGEALTAENQYRNIASAVPALARLARSYRLAIVHGNGPQVGLLALQNLAWKEVEPYPLDVLVAESQGMIGYMLAQSLSAQPQMPPVTTVLTRIEVSPDDPAFLQPEKFIGPVYQPEEQEALEAAYGWQMKRDGKYLRRVVASPQPRKILDSEAIELLLKEGHVVICSGGGGVPVTDDGAGSEAVIDKDLAAALLAEQINADGLVILTDADAVYENWGTPQQRAIRHATPDELAPFAKADGSMGPKVTAVSGYVRSRGKPAWIGALSRIEETLAGEAGTCISL
>NZ_CP049081.1|WP_000152519.1|3359847_3360663_-|DUF2877-domain-containing-protein
MTIIHPLLASSSAPNYRQSWRLAGVWRRAINLMTESGELLTLHRQGSGFGPGGWVLRRAQFDALCGGLCGNERPQVVAQGIRLGRFTVKQPQRYCLLRITPPAHPQPLAAAWMQRAEETGLFGPLALAASDPLPAELRQFRHCFQAALNGVKTDWRHWLGKGPGLTPSHDDTLSGMLLAAWYYGALDARSGRPFFACSDNLQLVTTAVSVSYLRYAAQGYFASPLLHFVHALSCPKRTAVAIDSLLALGHTSGADTLLGFWLGQQLLQGKP
>NZ_CP049081.1|WP_000495367.1|3360673_3361933_-|DUF1116-domain-containing-protein
MFTSVAQANAAVIEQIRRARPHWLDVQPASSLISELNEGKTLLHAGPPMRWQEMTGPMKGACVGACLFEGWAKDEAQALAILEQGEVNFIPCHHVNAVGPMGGITSASMPMLVVENVTDGNRAYCNLNEGIGKVMRFGAYGEDVLTRHRWMRDVLMPVLSAALGRMERGIDLTAMMAQGITMGDEFHQRNIASSALLMRALAPQIARLDHDKQHIAEVMDFLSVTDQFFLNLAMAYCKAAMDAGAMIRAGSIVTAMTRNGNMFGIRVSGLGERWFTAPVNTPQGLFFTGFSQEQANPDMGDSAITETFGIGGAAMIAAPGVTRFVGAGGMEAARAVSEEMAEIYLERNMQLQIPSWDFQGACLGLDIRRVVETGITPLINTGIAHKEAGIGQIGAGTVRAPLACFEQALEALAESMGIG
>NZ_CP049081.1|WP_000580822.1|3361942_3363610_-|acyl-CoA-synthetase-FdrA
MIHAFIKKGCFQDSVSLMIISRKLSESENVDDVSVMMGTPANKALLDTTGFWHDDFNNATPNDICVAIRSEAADAGIAQAIMQQLEEALKQLAQGSGSSQALMQVRRWDSACQKLPDANLALISVAGEYAAELANQALDRNLNVMMFSDNVTLEDEIQLKTRAREKGLLVMGPDCGTSMIAGTPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPAEAVRLKIVNAMKATGKPTVALFLGYTPAVARDENVWFASSLDEAARLACLLSRVTARRNAIAPVSSGFICGLYTGGTLAAEAAGLLAGHLGVEADDTHQHGMMLDADSHQIIDLGDDFYTVGRPHPMIDPTLRNQLIADLGAKPQVRVLLLDVVIGFGATADPAASLVSAWQKACAARLDNQPLYAIATVTGTERDPQCRSQQIATLEDAGIAVVSSLPEATLLAAALIHPLSPAAQQHTPSLLENVAVINIGLRSFALELQSASKPVVHYQWSPVAGGNKKLARLLERLQ
>NZ_CP049081.1|WP_000703900.1|3363926_3364976_+|ureidoglycolate-dehydrogenase
MKISRETLHQLIENKLCQAGLKREHAATVAEVLVYADARGIHSHGAVRVEYYAERISKGGTNREPEFRLEETGPCSAILHADNAAGQVAAKMGMEHAIKTAQQNGVAVVGISRMGHSGAISYFVQQAARAGFIGISMCQSDPMVVPFGGAEIYYGTNPLAFAAPGEGDEILTFDMATTVQAWGKVLDARSRNMSIPDTWAVDKNGVPTTDPFAVHALLPAAGPKGYGLMMMIDVLSGVLLGLPFGRQVSSMYDDLHAGRNLGQLHIVINPNFFSSSELFRQHLSQTMRELNAITPAPGFNQVYYPGQDQDIKQRKAAVEGIEIVDDIYQYLISDALYNTSYETKNPFAQ
>NZ_CP049081.1|WP_001310618.1|3364997_3366233_+|allantoate-deiminase
MITHFRQAIEETLPWLSSFGADPAGGMTRLLYSPEWLETQQQFKKRMAASGLETRFDEVGNLYGRLNGTEYPQEVVLSGSHIDTVVNGGNLDGQFGALAAWLAIDWLKTQYGAPLRTVEVVAMAEEEGSRFPYVFWGSKNIFGLANPDDVRNICDAKGNSFVDAMKACGFTLPNAPLTPRQDIKAFVELHIEQGCVLESNGQSIGVVNAIVGQRRYTVTLNGESNHAGTTPMGYRRDTVYAFSRICHQSVEKAKRMGDPLVLTFGKVEPRPNTVNVVPGKTTFTIDCRHTDAAVLRDFTQQLENDMRAICDEMDIGIDIDLWMDEEPVPMNKELVATLTELCEREKLNYRVMHSGAGHDAQIFAPRVPTCMIFIPSINGISHNPAERTNITDLAEGVKTLALMLYQLAWQK
>NZ_CP049081.1|WP_000540997.1|3366243_3367029_+|(S)-ureidoglycine-aminohydrolase
MGYLNNVTGYREDLLANRAIVKHGNFALLTPDGLVKNIIPGFENCDATILSTPKLGASFVDYLVTLHQNGGNQQGFGGEGIETFLYVISGNITAKAEGKTFALSEGGYLYCPPGSLMTFVNAQAEDSQIFLYKRRYVPVEGYAPWLVSGNASELERIHYEGMDDVILLDFLPKELGFDMNMHILSFAPGASHGYIETHVQEHGAYILSGQGVYNLDNNWIPVKKGDYIFMGAYSLQAGYGVGRGEAFSYIYSKDCNRDVEI
>NZ_CP049081.1|WP_000943544.1|3368817_3369594_-|hydroxypyruvate-isomerase
MLRFSANLSMLFGEYDFLARFEKAAQCGFRGVEFMFPYDYDIEELKHVLASNKLEHTLHNLPAGDWAAGERGIACIPGREEEFRDGVAAAIRYARALGNKKINCLVGKTPAGFSSEQIHATLVENLRYAANMLMKEDILLLIEPINHFDIPGFHLTGTRQALKLIDDVGCCNLKIQYDIYHMQRMEGELTNTMTQWADKIGHLQIADNPHRGEPGTGEINYDYLFKVIENSDYNGWVGCEYKPQTTTEAGLRWMDPYR
>NZ_CP049081.1|WP_001096881.1|3369606_3371388_-|glyoxylate-carboligase
MAKMRAVDAAMYVLEKEGITTAFGVPGAAINPFYSAMRKHGGIRHILARHVEGASHMAEGYTRATAGNIGVCLGTSGPAGTDMITALYSASADSIPILCITGQAPRARLHKEDFQAVDIEAIAKPVSKMAVTVREAALVPRVLQQAFHLMRSGRPGPVLVDLPFDVQVAEIEFDPDMYEPLPVYKPAASRMQIEKAVEMLIQAERPVIVAGGGVINADAAALLQQFAELTSVPVIPTLMGWGCIPDDHELMAGMVGLQTAHRYGNATLLASDMVFGIGNRFANRHTGSVEKYTEGRKIVHIDIEPTQIGRVLCPDLGIVSDAKAALTLLVEVAQEMQKAGRLPCRKEWVADCQQRKRTLLRKTHFDNVPVKPQRVYEEMNKAFGRDVCYVTTIGLSQIAAAQMLHVFKDRHWINCGQAGPLGWTIPAALGVCAADPKRNVVAISGDFDFQFLIEELAVGAQFNIPYIHVLVNNAYLGLIRQSQRAFDMDYCVQLAFENINSSEVNGYGVDHVKVAEGLGCKAIRVFKPEDIAPAFEQAKALMAQYRVPVVVEVILERVTNISMGSELDNVMEFEDIADNAADAPTETCFMHYE
>NZ_CP049081.1|WP_000141275.1|3371477_3372293_-|HTH-type-transcriptional-repressor-AllR
MTEVRRRGRPGQAEPVAQKGAQALERGIAILQYLEKSGGSSSVSDISLNLDLPLSTTFRLLKVLQAADFVYQDSQLGWWHIGLGVFNVGAAYIHNRDVLSVAGPFMRRLMLLSGETVNVAIRNGNEAVLIGQLECKSMVRMCAPLGSRLPLHASGAGKALLYPLAEEELMSIILQTGLQQFTPTTLVDMPTLLKDLEQARELGYTVDKEEHVVGLNCIASAIYDDVGSVVAAISISGPSSRLTEDRFVSQGELVRDTARDISTALGLKAHP

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP049081_2	2.3\|1010832\|32\|NZ_CP049081\|PILER-CR,CRISPRCasFinder,CRT	1010832-1010863	32	NC_021229	Arthrobacter nicotinovorans pAO1 megaplasmid sequence, strain ATCC 49919	65474-65505	5	0.844
NZ_CP049081_1	1.9\|984112\|31\|NZ_CP049081\|CRISPRCasFinder	984112-984142	31	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	755174-755204	6	0.806
NZ_CP049081_1	1.9\|984112\|31\|NZ_CP049081\|CRISPRCasFinder	984112-984142	31	MH067970	Arthrobacter sp. strain ANT_H40 plasmid pA40H1, complete sequence	47826-47856	6	0.806
NZ_CP049081_2	2.3\|1010832\|32\|NZ_CP049081\|PILER-CR,CRISPRCasFinder,CRT	1010832-1010863	32	NZ_CP017422	Arthrobacter sp. ZXY-2 plasmid pZXY21, complete sequence	208287-208318	6	0.812
NZ_CP049081_1	1.12\|984295\|31\|NZ_CP049081\|CRISPRCasFinder	984295-984325	31	MG945629	UNVERIFIED: Microviridae sp. isolate 6200-1602, complete genome	4209-4239	7	0.774
NZ_CP049081_1	1.12\|984295\|31\|NZ_CP049081\|CRISPRCasFinder	984295-984325	31	MK814759	Gordonia phage Reyja, complete genome	4468-4498	7	0.774
NZ_CP049081_2	2.4\|1010893\|32\|NZ_CP049081\|PILER-CR,CRISPRCasFinder,CRT	1010893-1010924	32	MK416018	Klebsiella phage ST147-VIM1phi7.1, complete genome	24790-24821	7	0.781
NZ_CP049081_2	2.5\|1010954\|32\|NZ_CP049081\|PILER-CR,CRISPRCasFinder,CRT	1010954-1010985	32	MF351863	Synechococcus phage Bellamy, complete genome	123998-124029	7	0.781
NZ_CP049081_1	1.3\|984110\|33\|NZ_CP049081\|PILER-CR,CRT	984110-984142	33	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	755172-755204	8	0.758
NZ_CP049081_1	1.9\|984112\|31\|NZ_CP049081\|CRISPRCasFinder	984112-984142	31	NZ_CP007070	Rhizobium leguminosarum bv. trifolii CB782 plasmid unnamed, complete sequence	191920-191950	8	0.742
NZ_CP049081_1	1.11\|984234\|31\|NZ_CP049081\|CRISPRCasFinder	984234-984264	31	NZ_CP033579	Vibrio mediterranei strain 117-T6 plasmid unnamed, complete sequence	47369-47399	8	0.742
NZ_CP049081_2	2.3\|1010832\|32\|NZ_CP049081\|PILER-CR,CRISPRCasFinder,CRT	1010832-1010863	32	MK113951	Phage 5P_3, complete genome	11967-11998	8	0.75
NZ_CP049081_2	2.3\|1010832\|32\|NZ_CP049081\|PILER-CR,CRISPRCasFinder,CRT	1010832-1010863	32	AP017924	Ralstonia phage RP12 DNA, complete genome	11643-11674	8	0.75
NZ_CP049081_2	2.9\|1011198\|32\|NZ_CP049081\|CRISPRCasFinder,CRT	1011198-1011229	32	NZ_AP018516	Acetobacter orientalis strain FAN1 plasmid pAOF1, complete sequence	48296-48327	8	0.75
NZ_CP049081_1	1.7\|983990\|31\|NZ_CP049081\|CRISPRCasFinder	983990-984020	31	NC_007959	Nitrobacter hamburgensis X14 plasmid 1, complete sequence	246574-246604	9	0.71
NZ_CP049081_1	1.8\|984051\|31\|NZ_CP049081\|CRISPRCasFinder	984051-984081	31	MF158039	Shigella phage Sf12, complete genome	4976-5006	9	0.71
NZ_CP049081_1	1.8\|984051\|31\|NZ_CP049081\|CRISPRCasFinder	984051-984081	31	MF158042	Shigella phage Sd1, complete genome	939-969	9	0.71
NZ_CP049081_2	2.4\|1010893\|32\|NZ_CP049081\|PILER-CR,CRISPRCasFinder,CRT	1010893-1010924	32	NZ_CP050104	Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b2, complete sequence	1143591-1143622	9	0.719
NZ_CP049081_2	2.4\|1010893\|32\|NZ_CP049081\|PILER-CR,CRISPRCasFinder,CRT	1010893-1010924	32	NZ_CP025507	Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvA, complete sequence	891493-891524	9	0.719
NZ_CP049081_2	2.4\|1010893\|32\|NZ_CP049081\|PILER-CR,CRISPRCasFinder,CRT	1010893-1010924	32	NZ_CP050109	Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b2, complete sequence	1143594-1143625	9	0.719
NZ_CP049081_2	2.4\|1010893\|32\|NZ_CP049081\|PILER-CR,CRISPRCasFinder,CRT	1010893-1010924	32	NZ_CP022666	Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR1, complete sequence	315030-315061	9	0.719
NZ_CP049081_2	2.4\|1010893\|32\|NZ_CP049081\|PILER-CR,CRISPRCasFinder,CRT	1010893-1010924	32	NZ_CP050086	Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b7, complete sequence	1123532-1123563	9	0.719
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229083-229131	9	0.816
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229184-229232	9	0.816
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229285-229333	9	0.816
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239577-239625	9	0.816
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239678-239726	9	0.816
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239779-239827	9	0.816
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230489-230537	9	0.816
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230590-230638	9	0.816
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230691-230739	9	0.816
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211459-211507	9	0.816
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211560-211608	9	0.816
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211661-211709	9	0.816
NZ_CP049081_1	1.8\|984051\|31\|NZ_CP049081\|CRISPRCasFinder	984051-984081	31	MT840185	Bacteriophage sp. Joined_contig_19 genomic sequence	64310-64340	10	0.677
NZ_CP049081_1	1.8\|984051\|31\|NZ_CP049081\|CRISPRCasFinder	984051-984081	31	KF356199	Microcystis phage MaMV-DC, complete genome	50157-50187	10	0.677
NZ_CP049081_1	1.8\|984051\|31\|NZ_CP049081\|CRISPRCasFinder	984051-984081	31	NC_008562	Microcystis phage Ma-LMM01 DNA, complete genome	44744-44774	10	0.677
NZ_CP049081_2	2.2\|1010771\|32\|NZ_CP049081\|PILER-CR,CRISPRCasFinder,CRT	1010771-1010802	32	NZ_CP028970	Aminobacter sp. MSH1 plasmid pUSP2, complete sequence	156123-156154	10	0.688
NZ_CP049081_2	2.2\|1010771\|32\|NZ_CP049081\|PILER-CR,CRISPRCasFinder,CRT	1010771-1010802	32	NZ_CP053984	Achromobacter pestifer strain FDAARGOS_790 plasmid unnamed, complete sequence	21888-21919	10	0.688
NZ_CP049081_2	2.2\|1010771\|32\|NZ_CP049081\|PILER-CR,CRISPRCasFinder,CRT	1010771-1010802	32	NC_010935	Comamonas testosteroni CNB-1 plasmid pCNB, complete sequence	28766-28797	10	0.688
NZ_CP049081_2	2.2\|1010771\|32\|NZ_CP049081\|PILER-CR,CRISPRCasFinder,CRT	1010771-1010802	32	JX469826	Uncultured bacterium plasmid pB12, complete sequence	11283-11314	10	0.688
NZ_CP049081_2	2.2\|1010771\|32\|NZ_CP049081\|PILER-CR,CRISPRCasFinder,CRT	1010771-1010802	32	JN106171	Uncultured bacterium plasmid pAKD26, complete sequence	11289-11320	10	0.688
NZ_CP049081_2	2.2\|1010771\|32\|NZ_CP049081\|PILER-CR,CRISPRCasFinder,CRT	1010771-1010802	32	NC_016968	Comamonas testosteroni plasmid pTB30, complete sequence	11287-11318	10	0.688
NZ_CP049081_2	2.2\|1010771\|32\|NZ_CP049081\|PILER-CR,CRISPRCasFinder,CRT	1010771-1010802	32	NC_016978	Comamonas testosteroni plasmid pI2, complete sequence	11272-11303	10	0.688
NZ_CP049081_2	2.2\|1010771\|32\|NZ_CP049081\|PILER-CR,CRISPRCasFinder,CRT	1010771-1010802	32	NZ_CP017760	Cupriavidus necator strain NH9 plasmid pENH91, complete sequence	67078-67109	10	0.688
NZ_CP049081_2	2.2\|1010771\|32\|NZ_CP049081\|PILER-CR,CRISPRCasFinder,CRT	1010771-1010802	32	NZ_CP053554	Diaphorobacter sp. JS3050 plasmid pDCNB, complete sequence	4235-4266	10	0.688
NZ_CP049081_2	2.2\|1010771\|32\|NZ_CP049081\|PILER-CR,CRISPRCasFinder,CRT	1010771-1010802	32	NC_019263	Delftia acidovorans plasmid pLME1, complete sequence	11288-11319	10	0.688
NZ_CP049081_2	2.2\|1010771\|32\|NZ_CP049081\|PILER-CR,CRISPRCasFinder,CRT	1010771-1010802	32	NC_019264	Delftia acidovorans plasmid pNB8c, complete sequence	11288-11319	10	0.688
NZ_CP049081_2	2.2\|1010771\|32\|NZ_CP049081\|PILER-CR,CRISPRCasFinder,CRT	1010771-1010802	32	NC_019283	Delftia acidovorans plasmid pC1-1, complete sequence	11288-11319	10	0.688
NZ_CP049081_2	2.2\|1010771\|32\|NZ_CP049081\|PILER-CR,CRISPRCasFinder,CRT	1010771-1010802	32	NC_006830	Achromobacter xylosoxidans A8 plasmid pA81, complete sequence	11350-11381	10	0.688
NZ_CP049081_2	2.3\|1010832\|32\|NZ_CP049081\|PILER-CR,CRISPRCasFinder,CRT	1010832-1010863	32	NC_002580	Propionibacterium freudenreichii plasmid p545, complete sequence	2898-2929	10	0.688
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229386-229434	10	0.796
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239880-239928	10	0.796
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230792-230840	10	0.796
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211762-211810	10	0.796
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	NZ_CP044147	Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2	7442-7490	10	0.796
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	CP044351	Escherichia coli strain 194195 plasmid p194195_1, complete sequence	84266-84314	10	0.796
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	386508-386556	10	0.796
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	14196-14244	10	0.796
NZ_CP049081_1	1.2\|984049\|33\|NZ_CP049081\|PILER-CR,CRT	984049-984081	33	MF158039	Shigella phage Sf12, complete genome	4974-5006	11	0.667
NZ_CP049081_1	1.2\|984049\|33\|NZ_CP049081\|PILER-CR,CRT	984049-984081	33	MF158042	Shigella phage Sd1, complete genome	937-969	11	0.667
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	194003-194051	11	0.776
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	194096-194144	11	0.776
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	194282-194330	11	0.776
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	204497-204545	11	0.776
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	204590-204638	11	0.776
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	204776-204824	11	0.776
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	195331-195379	11	0.776
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	195424-195472	11	0.776
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	195610-195658	11	0.776
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	176286-176334	11	0.776
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	176379-176427	11	0.776
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	176565-176613	11	0.776
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	NZ_CP010208	Escherichia coli strain M11 plasmid B, complete sequence	27282-27330	11	0.776
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	NZ_CP010208	Escherichia coli strain M11 plasmid B, complete sequence	27381-27429	11	0.776
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	51834-51882	11	0.776
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	NZ_AP023209	Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence	19389-19437	11	0.776
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	211730-211778	12	0.755
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	211930-211978	12	0.755
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	194189-194237	12	0.755
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	222224-222272	12	0.755
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	222424-222472	12	0.755
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	204683-204731	12	0.755
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	213058-213106	12	0.755
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	213258-213306	12	0.755
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	195517-195565	12	0.755
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	194013-194061	12	0.755
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	194213-194261	12	0.755
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	176472-176520	12	0.755
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	11511-11559	12	0.755
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	397088-397136	12	0.755
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	404133-404181	12	0.755
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	NZ_AP023207	Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence	27994-28042	12	0.755
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	NZ_AP023207	Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence	31299-31347	12	0.755
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	MG065691	UNVERIFIED: Campylobacter phage A11a, complete genome	33059-33107	12	0.755
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	MG065686	UNVERIFIED: Campylobacter phage A18a, complete genome	141016-141064	12	0.755
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	MF374379	Escherichia phage DN1, complete genome	31158-31206	12	0.755
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	14105-14153	13	0.735
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	NZ_AP023208	Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence	6859-6907	13	0.735
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	NC_049343	Escherichia phage 500465-2, complete genome	31797-31845	13	0.735
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	MT230112	Escherichia coli strain DH5alpha plasmid pESBL112, complete sequence	94-142	13	0.735
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	82842-82890	14	0.714
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	313592-313640	14	0.714
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	MG065691	UNVERIFIED: Campylobacter phage A11a, complete genome	63889-63937	14	0.714
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	MG065686	UNVERIFIED: Campylobacter phage A18a, complete genome	110186-110234	14	0.714
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	NZ_CP053721	Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence	198909-198957	14	0.714
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	NZ_CP019246	Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence	40305-40353	14	0.714
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	NZ_CP044299	Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence	91418-91466	14	0.714
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	102544-102592	15	0.694
NZ_CP049081_3	3.1\|3206512\|49\|NZ_CP049081\|CRISPRCasFinder	3206512-3206560	49	NZ_CP044308	Escherichia coli strain C27A plasmid pC27A-3, complete sequence	56031-56079	15	0.694

1. spacer 2.3|1010832|32|NZ_CP049081|PILER-CR,CRISPRCasFinder,CRT matches to NC_021229 (Arthrobacter nicotinovorans pAO1 megaplasmid sequence, strain ATCC 49919) position: , mismatch: 5, identity: 0.844

-ctgctggagctggctgcaaggcaagccgccca	CRISPR spacer
tccgctcg-gcaggctgcaacgcaagccgccca	Protospacer
 *.*** * ** ******** ************

2. spacer 1.9|984112|31|NZ_CP049081|CRISPRCasFinder matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 6, identity: 0.806

cgtggtcatgggtgctgctgttgcagagcca	CRISPR spacer
cgtggtcgtgggtgctgctgttgctggagcg	Protospacer
*******.**************** *.. *.

3. spacer 1.9|984112|31|NZ_CP049081|CRISPRCasFinder matches to MH067970 (Arthrobacter sp. strain ANT_H40 plasmid pA40H1, complete sequence) position: , mismatch: 6, identity: 0.806

cgtggtcatgggtgctgctgttgcagagcca	CRISPR spacer
cgtggtcaagggtgctgctgttcccacgcct	Protospacer
******** ************* * . ***

4. spacer 2.3|1010832|32|NZ_CP049081|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017422 (Arthrobacter sp. ZXY-2 plasmid pZXY21, complete sequence) position: , mismatch: 6, identity: 0.812

-ctgctggagctggctgcaaggcaagccgccca	CRISPR spacer
tccgctcg-gcaggctgcaacgcaagccgcccc	Protospacer
 *.*** * ** ******** ***********

5. spacer 1.12|984295|31|NZ_CP049081|CRISPRCasFinder matches to MG945629 (UNVERIFIED: Microviridae sp. isolate 6200-1602, complete genome) position: , mismatch: 7, identity: 0.774

agcctgacgagactactgaggccgttctgtc	CRISPR spacer
aaaaggccaagactactgaggccgttcagtc	Protospacer
*.   * *.****************** ***

6. spacer 1.12|984295|31|NZ_CP049081|CRISPRCasFinder matches to MK814759 (Gordonia phage Reyja, complete genome) position: , mismatch: 7, identity: 0.774

agcctgacgagactactgaggccgttctgtc-	CRISPR spacer
agcctgacgaggctactggggcca-gcggtgg	Protospacer
***********.******.****.  * **

7. spacer 2.4|1010893|32|NZ_CP049081|PILER-CR,CRISPRCasFinder,CRT matches to MK416018 (Klebsiella phage ST147-VIM1phi7.1, complete genome) position: , mismatch: 7, identity: 0.781

cccaccagcgcgttttttgccggggccatagt	CRISPR spacer
cccatcagcgcgttttttggcggtgtgatgga	Protospacer
****.************** *** *. **.*

8. spacer 2.5|1010954|32|NZ_CP049081|PILER-CR,CRISPRCasFinder,CRT matches to MF351863 (Synechococcus phage Bellamy, complete genome) position: , mismatch: 7, identity: 0.781

ttgaactcaccacgattgttaatatggacgat	CRISPR spacer
aaggtatcaccacgattgttgatatgggcgat	Protospacer
  *.  **************.******.****

9. spacer 1.3|984110|33|NZ_CP049081|PILER-CR,CRT matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.758

gacgtggtcatgggtgctgctgttgcagagcca	CRISPR spacer
tccgtggtcgtgggtgctgctgttgctggagcg	Protospacer
  *******.**************** *.. *.

10. spacer 1.9|984112|31|NZ_CP049081|CRISPRCasFinder matches to NZ_CP007070 (Rhizobium leguminosarum bv. trifolii CB782 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.742

cgtggtcatgggtgctgctgttgcagagcca	CRISPR spacer
tgcggtcatggatgctgatgttgcagtgatg	Protospacer
.*.********.***** ******** * ..

11. spacer 1.11|984234|31|NZ_CP049081|CRISPRCasFinder matches to NZ_CP033579 (Vibrio mediterranei strain 117-T6 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.742

atagcaatagtccatagatttgcgaaaacag	CRISPR spacer
aggtttgtagtccattgatttgcgaaaactg	Protospacer
* . . .******** ************* *

12. spacer 2.3|1010832|32|NZ_CP049081|PILER-CR,CRISPRCasFinder,CRT matches to MK113951 (Phage 5P_3, complete genome) position: , mismatch: 8, identity: 0.75

ctgctggagctggctgcaaggcaagccgccca	CRISPR spacer
gagcatcggctggctgcaaggcaagctgcccc	Protospacer
  **   .******************.****

13. spacer 2.3|1010832|32|NZ_CP049081|PILER-CR,CRISPRCasFinder,CRT matches to AP017924 (Ralstonia phage RP12 DNA, complete genome) position: , mismatch: 8, identity: 0.75

ctgctggagctggctgcaaggcaagccgccca	CRISPR spacer
gcggaagcgctggctgcacggcaagcggccca	Protospacer
 .*  .* ********** ******* *****

14. spacer 2.9|1011198|32|NZ_CP049081|CRISPRCasFinder,CRT matches to NZ_AP018516 (Acetobacter orientalis strain FAN1 plasmid pAOF1, complete sequence) position: , mismatch: 8, identity: 0.75

gcaacgacggtgagatttcacgcctgacgctg	CRISPR spacer
tcaacgacggtaagatgtcacgcctaaagaat	Protospacer
 **********.**** ********.* *

15. spacer 1.7|983990|31|NZ_CP049081|CRISPRCasFinder matches to NC_007959 (Nitrobacter hamburgensis X14 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.71

caaaaaccgggcaatcgcaaaaaggcgtaat	CRISPR spacer
aaaaaaccgcccaatcgcaaaaagatgacga	Protospacer
 ********  *************..*  .

16. spacer 1.8|984051|31|NZ_CP049081|CRISPRCasFinder matches to MF158039 (Shigella phage Sf12, complete genome) position: , mismatch: 9, identity: 0.71

tgtttgcggcattaacgctcaccagtatttc	CRISPR spacer
tgtttgcagcattaacgctccccaagtgccg	Protospacer
*******.************ ***.   ..

17. spacer 1.8|984051|31|NZ_CP049081|CRISPRCasFinder matches to MF158042 (Shigella phage Sd1, complete genome) position: , mismatch: 9, identity: 0.71

tgtttgcggcattaacgctcaccagtatttc	CRISPR spacer
tgtttgcagcattaacgctctccaagtgccg	Protospacer
*******.************ ***.   ..

18. spacer 2.4|1010893|32|NZ_CP049081|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050104 (Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b2, complete sequence) position: , mismatch: 9, identity: 0.719

cccaccagcgcgttttttgccggggccatagt	CRISPR spacer
gccacccgcgctttttttgccgggccggatat	Protospacer
 ***** **** ************ * .  .*

19. spacer 2.4|1010893|32|NZ_CP049081|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025507 (Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvA, complete sequence) position: , mismatch: 9, identity: 0.719

cccaccagcgcgttttttgccggggccatagt	CRISPR spacer
gccacccgcgctttttttgccgggccggatat	Protospacer
 ***** **** ************ * .  .*

20. spacer 2.4|1010893|32|NZ_CP049081|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050109 (Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b2, complete sequence) position: , mismatch: 9, identity: 0.719

cccaccagcgcgttttttgccggggccatagt	CRISPR spacer
gccacccgcgctttttttgccgggccggatat	Protospacer
 ***** **** ************ * .  .*

21. spacer 2.4|1010893|32|NZ_CP049081|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022666 (Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR1, complete sequence) position: , mismatch: 9, identity: 0.719

cccaccagcgcgttttttgccggggccatagt	CRISPR spacer
gccacccgcgctttttttgccgggccggatat	Protospacer
 ***** **** ************ * .  .*

22. spacer 2.4|1010893|32|NZ_CP049081|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050086 (Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b7, complete sequence) position: , mismatch: 9, identity: 0.719

cccaccagcgcgttttttgccggggccatagt	CRISPR spacer
gccacccgcgctttttttgccgggccggatat	Protospacer
 ***** **** ************ * .  .*

23. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

24. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

25. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacgggtggcg	Protospacer
. **. **********.************************** * * .

26. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

27. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

28. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacgggtggcg	Protospacer
. **. **********.************************** * * .

29. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

30. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

31. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacgggtggcg	Protospacer
. **. **********.************************** * * .

32. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

33. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

34. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacgggtggcg	Protospacer
. **. **********.************************** * * .

35. spacer 1.8|984051|31|NZ_CP049081|CRISPRCasFinder matches to MT840185 (Bacteriophage sp. Joined_contig_19 genomic sequence) position: , mismatch: 10, identity: 0.677

tgtttgcggcattaacgctcaccagtatttc	CRISPR spacer
gtgcggcggcattaatgctcacaagtatggt	Protospacer
   . **********.****** *****  .

36. spacer 1.8|984051|31|NZ_CP049081|CRISPRCasFinder matches to KF356199 (Microcystis phage MaMV-DC, complete genome) position: , mismatch: 10, identity: 0.677

tgtttgcggcattaacgctcaccagtatttc	CRISPR spacer
gtgcggcggcattaatgctcacaagtatggt	Protospacer
   . **********.****** *****  .

37. spacer 1.8|984051|31|NZ_CP049081|CRISPRCasFinder matches to NC_008562 (Microcystis phage Ma-LMM01 DNA, complete genome) position: , mismatch: 10, identity: 0.677

tgtttgcggcattaacgctcaccagtatttc	CRISPR spacer
gtgcggcggcattaatgctcacaagtatggt	Protospacer
   . **********.****** *****  .

38. spacer 2.2|1010771|32|NZ_CP049081|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028970 (Aminobacter sp. MSH1 plasmid pUSP2, complete sequence) position: , mismatch: 10, identity: 0.688

gactcaccccgaaagagattgccagccagctt	CRISPR spacer
acgtcaccccggaagcgattgccagcacacgc	Protospacer
.  ********.*** **********  .* .

39. spacer 2.2|1010771|32|NZ_CP049081|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053984 (Achromobacter pestifer strain FDAARGOS_790 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

gactcaccccgaaagagattgccagccagctt	CRISPR spacer
aggtactgacgaatgagaatgccagccagctt	Protospacer
.. *  .  **** **** *************

40. spacer 2.2|1010771|32|NZ_CP049081|PILER-CR,CRISPRCasFinder,CRT matches to NC_010935 (Comamonas testosteroni CNB-1 plasmid pCNB, complete sequence) position: , mismatch: 10, identity: 0.688

gactcaccccgaaagagattgccagccagctt	CRISPR spacer
aggtactgacgaatgagaatgccagccagctt	Protospacer
.. *  .  **** **** *************

41. spacer 2.2|1010771|32|NZ_CP049081|PILER-CR,CRISPRCasFinder,CRT matches to JX469826 (Uncultured bacterium plasmid pB12, complete sequence) position: , mismatch: 10, identity: 0.688

gactcaccccgaaagagattgccagccagctt	CRISPR spacer
aggtactgacgaatgagaatgccagccagctt	Protospacer
.. *  .  **** **** *************

42. spacer 2.2|1010771|32|NZ_CP049081|PILER-CR,CRISPRCasFinder,CRT matches to JN106171 (Uncultured bacterium plasmid pAKD26, complete sequence) position: , mismatch: 10, identity: 0.688

gactcaccccgaaagagattgccagccagctt	CRISPR spacer
aggtactgacgaatgagaatgccagccagctt	Protospacer
.. *  .  **** **** *************

43. spacer 2.2|1010771|32|NZ_CP049081|PILER-CR,CRISPRCasFinder,CRT matches to NC_016968 (Comamonas testosteroni plasmid pTB30, complete sequence) position: , mismatch: 10, identity: 0.688

gactcaccccgaaagagattgccagccagctt	CRISPR spacer
aggtactgacgaatgagaatgccagccagctt	Protospacer
.. *  .  **** **** *************

44. spacer 2.2|1010771|32|NZ_CP049081|PILER-CR,CRISPRCasFinder,CRT matches to NC_016978 (Comamonas testosteroni plasmid pI2, complete sequence) position: , mismatch: 10, identity: 0.688

gactcaccccgaaagagattgccagccagctt	CRISPR spacer
aggtactgacgaatgagaatgccagccagctt	Protospacer
.. *  .  **** **** *************

45. spacer 2.2|1010771|32|NZ_CP049081|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017760 (Cupriavidus necator strain NH9 plasmid pENH91, complete sequence) position: , mismatch: 10, identity: 0.688

gactcaccccgaaagagattgccagccagctt	CRISPR spacer
aggtactgacgaatgagaatgccagccagctt	Protospacer
.. *  .  **** **** *************

46. spacer 2.2|1010771|32|NZ_CP049081|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053554 (Diaphorobacter sp. JS3050 plasmid pDCNB, complete sequence) position: , mismatch: 10, identity: 0.688

gactcaccccgaaagagattgccagccagctt	CRISPR spacer
aggtactgacgaatgagaatgccagccagctt	Protospacer
.. *  .  **** **** *************

47. spacer 2.2|1010771|32|NZ_CP049081|PILER-CR,CRISPRCasFinder,CRT matches to NC_019263 (Delftia acidovorans plasmid pLME1, complete sequence) position: , mismatch: 10, identity: 0.688

gactcaccccgaaagagattgccagccagctt	CRISPR spacer
aggtactgacgaatgagaatgccagccagctt	Protospacer
.. *  .  **** **** *************

48. spacer 2.2|1010771|32|NZ_CP049081|PILER-CR,CRISPRCasFinder,CRT matches to NC_019264 (Delftia acidovorans plasmid pNB8c, complete sequence) position: , mismatch: 10, identity: 0.688

gactcaccccgaaagagattgccagccagctt	CRISPR spacer
aggtactgacgaatgagaatgccagccagctt	Protospacer
.. *  .  **** **** *************

49. spacer 2.2|1010771|32|NZ_CP049081|PILER-CR,CRISPRCasFinder,CRT matches to NC_019283 (Delftia acidovorans plasmid pC1-1, complete sequence) position: , mismatch: 10, identity: 0.688

gactcaccccgaaagagattgccagccagctt	CRISPR spacer
aggtactgacgaatgagaatgccagccagctt	Protospacer
.. *  .  **** **** *************

50. spacer 2.2|1010771|32|NZ_CP049081|PILER-CR,CRISPRCasFinder,CRT matches to NC_006830 (Achromobacter xylosoxidans A8 plasmid pA81, complete sequence) position: , mismatch: 10, identity: 0.688

gactcaccccgaaagagattgccagccagctt	CRISPR spacer
aggtactgacgaatgagaatgccagccagctt	Protospacer
.. *  .  **** **** *************

51. spacer 2.3|1010832|32|NZ_CP049081|PILER-CR,CRISPRCasFinder,CRT matches to NC_002580 (Propionibacterium freudenreichii plasmid p545, complete sequence) position: , mismatch: 10, identity: 0.688

ctgctggagctggctgcaaggcaagccgccca	CRISPR spacer
ccctgagagctggctgccacgcaagccgctgg	Protospacer
*. . .*********** * *********. .

52. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtaaacgccttatccggcctacggatggcg	Protospacer
. **. **********.****.********************* * * .

53. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtaaacgccttatccggcctacggatggcg	Protospacer
. **. **********.****.********************* * * .

54. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtaaacgccttatccggcctacggatggcg	Protospacer
. **. **********.****.********************* * * .

55. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtaaacgccttatccggcctacggatggcg	Protospacer
. **. **********.****.********************* * * .

56. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to NZ_CP044147 (Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacaattgccggatgcggcgtgaacgccttatccggcctacggttgagt	Protospacer
. *.. **********.**************************.* .*

57. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to CP044351 (Escherichia coli strain 194195 plasmid p194195_1, complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacaattgccggatgcggcgtgaacgccttatccggcctacggttgagt	Protospacer
. *.. **********.**************************.* .*

58. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga--	CRISPR spacer
cacaagtgccggatgcggcgtaaacgccttatccggcctacg--ccagact	Protospacer
. *..***********.****.********************  .*.**

59. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
gctggttgccggatgcggcgtgaacgccttatccggcctacattcggca	Protospacer
 *.** **********.************************. .. * *

60. spacer 1.2|984049|33|NZ_CP049081|PILER-CR,CRT matches to MF158039 (Shigella phage Sf12, complete genome) position: , mismatch: 11, identity: 0.667

tgtgtttgcggcattaacgctcaccagtatttc	CRISPR spacer
attgtttgcagcattaacgctccccaagtgccg	Protospacer
  *******.************ ***.   ..

61. spacer 1.2|984049|33|NZ_CP049081|PILER-CR,CRT matches to MF158042 (Shigella phage Sd1, complete genome) position: , mismatch: 11, identity: 0.667

tgtgtttgcggcattaacgctcaccagtatttc	CRISPR spacer
attgtttgcagcattaacgctctccaagtgccg	Protospacer
  *******.************ ***.   ..

62. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
* .  .**********.*************************. * * .

63. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
. * . **********.*************************. * * .

64. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*************************. * * .

65. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
* .  .**********.*************************. * * .

66. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
. * . **********.*************************. * * .

67. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*************************. * * .

68. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
* .  .**********.*************************. * * .

69. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
. * . **********.*************************. * * .

70. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*************************. * * .

71. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
* .  .**********.*************************. * * .

72. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
. * . **********.*************************. * * .

73. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*************************. * * .

74. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacaaccgccggatgcggcgtgaacgccttatccggcctacgggtgagc	Protospacer
. *.. .*********.************************** * .*

75. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacaaccgccggatgcggcgtgaacgccttatccggcctacgggtgagt	Protospacer
. *.. .*********.************************** * .*

76. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agctggtgccggatgcggcgtaaacgccttatccggcctacaaatgcgc	Protospacer
  * ************.****.*******************.. *  *

77. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to NZ_AP023209 (Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgtttatgccggatgcggtgtgaacgccttatccggcctacggatggcc	Protospacer
* .  .**********.*.************************ * *

78. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

79. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

80. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccactgccggatgcggcgtggacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*****.*******************. * * .

81. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

82. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

83. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccactgccggatgcggcgtggacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*****.*******************. * * .

84. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

85. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

86. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccactgccggatgcggcgtggacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*****.*******************. * * .

87. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

88. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

89. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccactgccggatgcggcgtggacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*****.*******************. * * .

90. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
aatttttgccggatgcggcgtgaacgccttatccggcctacaacgggca	Protospacer
  .   **********.************************..*  * *

91. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga---	CRISPR spacer
cacaattgccggatgcggcgtaaacgccttatccggcctaca---tggataa	Protospacer
. *.. **********.****.*******************.   .***

92. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
ttttcttgccggatgcggcgtaaacgccttatccggcctacaggacgtg	Protospacer
*..   **********.****.*******************.*  ** .

93. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
ctcaaatgccggatgcggcgtgaacgccttatccggcctacgcacacta	Protospacer
..*...**********.*************************  .   *

94. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agcaaatgccggatgcggcgtaaacgccttatccggcctacatttggca	Protospacer
  *...**********.****.*******************. .* * *

95. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to MG065691 (UNVERIFIED: Campylobacter phage A11a, complete genome) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
acactttgccggatgcggcgtgaacgcctgatccggcctacggtaagcc	Protospacer
 *    **********.************ *************.  *

96. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to MG065686 (UNVERIFIED: Campylobacter phage A18a, complete genome) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
acactttgccggatgcggcgtgaacgcctgatccggcctacggtaagcc	Protospacer
 *    **********.************ *************.  *

97. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to MF374379 (Escherichia phage DN1, complete genome) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgtttatgccggatgcggcgtgaacgccttatccggcctacaaaccgcg	Protospacer
* .  .**********.************************.. .** .

98. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 13, identity: 0.735

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
gttgattgccggatgcggcgtaaacgccttatccggcctacattcggca	Protospacer
 ..*. **********.****.*******************. .. * *

99. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 13, identity: 0.735

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
ttgttttgccggatgcggcgtgaacgccttatccggcctacaaaaccat	Protospacer
*.    **********.************************..  * .

100. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to NC_049343 (Escherichia phage 500465-2, complete genome) position: , mismatch: 13, identity: 0.735

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtgtttgccggatgcggcgtgaacgccttatccgacctacgtgtgacg	Protospacer
  .*  **********.******************.******  * . .

101. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to MT230112 (Escherichia coli strain DH5alpha plasmid pESBL112, complete sequence) position: , mismatch: 13, identity: 0.735

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
ttatgttgccggatgcggcgtaaacgccttatccggcctacaaaagcaa	Protospacer
*.  * **********.****.*******************..    .*

102. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
gtaaaatgccggatgcggcgtgaacgccttatccggcctacaaaccaag	Protospacer
 . ...**********.************************.. .*...

103. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
acaaaatgccggatgcggcgtaaacgccttatccggcctacaaaatcgt	Protospacer
 * ...**********.****.*******************..  . *

104. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to MG065691 (UNVERIFIED: Campylobacter phage A11a, complete genome) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
gcttcttgccggatgcggcgtgaacgccttatccggcctacaaaatcat	Protospacer
 *.   **********.************************..  . .

105. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to MG065686 (UNVERIFIED: Campylobacter phage A18a, complete genome) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
gcttcttgccggatgcggcgtgaacgccttatccggcctacaaaatcat	Protospacer
 *.   **********.************************..  . .

106. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to NZ_CP053721 (Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccagcctacaaaattgt	Protospacer
* .  .**********.*****************.******..  . *

107. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to NZ_CP019246 (Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgtttatgccggatgcggcgtaaacgccttatccggcctacaaaaagcg	Protospacer
* .  .**********.****.*******************..   * .

108. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to NZ_CP044299 (Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccagcctacaaaattgt	Protospacer
* .  .**********.*****************.******..  . *

109. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 15, identity: 0.694

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtcaatgccggatgcggcgtgaacgccttatccggcctacaaaagcat	Protospacer
  . ..**********.************************..    .

110. spacer 3.1|3206512|49|NZ_CP049081|CRISPRCasFinder matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 15, identity: 0.694

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtaaacgccttatccggcctacaaaaaacg	Protospacer
. * . **********.****.*******************..   . .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1018684 : 1031867

Escherichia_phage(50.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001295182.1\|1018684_1019446_+	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	3.4e-59	48.0
WP_000254708.1\|1019439_1020066_+	protein-L-isoaspartate O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	5.7e-36	49.7
WP_001272592.1\|1020205_1021345_+	murein hydrolase activator NlpD	D7RWE0	Brochothrix_phage	1.7e-06	35.6
WP_000081550.1\|1021407_1022400_+	RNA polymerase sigma factor RpoS	G8CLC7	Synechococcus_phage	6.1e-32	37.6
WP_000104441.1\|1022493_1023858_-	GntP family transporter	NA	NA	NA	NA
WP_001136934.1\|1023946_1024723_-	HPr family phosphocarrier protein	NA	NA	NA	NA
WP_001278994.1\|1024727_1025366_-	aldolase	A0A077SK32	Escherichia_phage	1.4e-82	75.0
WP_000590403.1\|1025362_1026625_-	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	1.7e-135	61.4
WP_000847985.1\|1026621_1027530_-	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	3.0e-118	76.9
WP_001300386.1\|1027725_1028493_+	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	7.4e-70	56.3
WP_001141322.1\|1028543_1029200_-	protein-serine/threonine phosphatase	A0A222YWF0	Escherichia_phage	6.2e-49	46.3
WP_001272928.1\|1029305_1031867_-	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	3.0e-30	20.6

DBSCAN-SWA_2

1387501 : 1449576

Klebsiella_phage(21.57%)

integrase,protease,terminase,portal,head,capsid,transposase,tail,holin

attL 1381660:1381675|attR 1423372:1423387

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1381660:1381675	attL	NA	NA	NA	NA
WP_023149820.1\|1387501_1388677_+\|integrase	site-specific integrase	A0A2R2Z2Y0	Escherichia_phage	1.9e-202	85.8
WP_023149821.1\|1388713_1390030_+	hypothetical protein	NA	NA	NA	NA
WP_071788171.1\|1390065_1390326_-	hypothetical protein	G3CFG7	Escherichia_phage	1.4e-12	61.1
WP_165696033.1\|1390261_1390783_-	DUF550 domain-containing protein	A0A0M4RTV1	Salmonella_phage	8.4e-33	61.6
WP_024176405.1\|1390775_1390976_-	hypothetical protein	A0A1U8QWK2	Salmonella_phage	2.7e-08	55.0
WP_023149824.1\|1390972_1391212_-	hypothetical protein	A0A2R2Z309	Escherichia_phage	4.7e-31	84.8
WP_000158002.1\|1391204_1391408_-	hypothetical protein	A0A2R2Z313	Escherichia_phage	1.5e-30	94.0
WP_023149825.1\|1391404_1392190_-	hypothetical protein	A4JX52	Burkholderia_virus	1.3e-61	50.6
WP_023149826.1\|1392189_1392489_-	hypothetical protein	K7PJS4	Enterobacterial_phage	3.2e-13	47.6
WP_019705289.1\|1392877_1393522_-	helix-turn-helix domain-containing protein	A0A1I9KG86	Aeromonas_phage	8.2e-38	40.7
WP_024176406.1\|1393616_1393826_+	cell division protein	NA	NA	NA	NA
WP_165696034.1\|1393971_1394283_-	hypothetical protein	NA	NA	NA	NA
WP_023149828.1\|1394353_1394821_+	hypothetical protein	K7PJS5	Enterobacterial_phage	7.4e-65	85.8
WP_001208720.1\|1395058_1395238_+	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	4.6e-15	73.1
WP_024176409.1\|1395227_1396181_+	helix-turn-helix domain-containing protein	U5P0A0	Shigella_phage	3.7e-103	75.5
WP_061363443.1\|1396177_1396987_+	Dam family site-specific DNA-(adenine-N6)-methyltransferase	A0A1C9II58	Salmonella_phage	1.6e-110	69.7
WP_023149832.1\|1397011_1397992_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	1.1e-134	67.2
WP_023149833.1\|1398010_1398355_+	antitermination protein Q lambdoid prophage DLP12	A0A0P0ZCW0	Stx2-converting_phage	3.0e-55	85.8
WP_023149834.1\|1398391_1398853_-	hypothetical protein	NA	NA	NA	NA
WP_023149835.1\|1398852_1399170_-	STAS-like domain-containing protein	NA	NA	NA	NA
WP_023149836.1\|1399166_1400267_-	hypothetical protein	NA	NA	NA	NA
WP_024176410.1\|1401013_1401313_+\|holin	holin	A0A286N2Q5	Klebsiella_phage	4.5e-39	83.8
WP_023149837.1\|1401309_1401849_+	glycoside hydrolase family 108 protein	A0A286N2Q6	Klebsiella_phage	9.7e-101	98.3
WP_004190674.1\|1401845_1402190_+	hypothetical protein	A0A286N2Q7	Klebsiella_phage	2.0e-38	80.7
WP_023149838.1\|1402186_1402462_+	hypothetical protein	A0A286N2Q8	Klebsiella_phage	1.5e-09	73.6
WP_024176412.1\|1402969_1403170_+	hypothetical protein	A0A1L6Z528	Klebsiella_phage	2.9e-18	73.3
WP_024176425.1\|1403913_1404135_+	hypothetical protein	NA	NA	NA	NA
WP_004177166.1\|1404360_1404606_+	DUF2560 family protein	A0A286N2R1	Klebsiella_phage	4.7e-18	63.0
WP_004177164.1\|1404661_1405003_+	HNH endonuclease	K7P7P4	Enterobacteria_phage	3.0e-47	73.9
WP_004177162.1\|1405185_1405650_+\|terminase	phage terminase small subunit P27 family	Q9B019	Phage_GMSE-1	3.7e-48	61.4
WP_023149918.1\|1405603_1407346_+\|terminase	terminase large subunit	A0A0U2C138	Paracoccus_phage	6.9e-140	46.0
WP_023149917.1\|1407345_1408653_+\|portal	phage portal protein	K7PJU5	Enterobacteria_phage	3.5e-213	85.1
WP_019705411.1\|1408666_1409521_+\|protease	Clp protease ClpP	K7PH05	Enterobacteria_phage	2.7e-137	89.4
WP_023149916.1\|1409531_1410749_+\|capsid	phage major capsid protein	K7PM57	Enterobacteria_phage	1.8e-203	90.8
WP_165696035.1\|1410791_1411034_+	hypothetical protein	K7PHI6	Enterobacteria_phage	1.6e-10	68.1
WP_023149914.1\|1411033_1411360_+\|head,tail	phage gp6-like head-tail connector protein	K7PKT4	Enterobacteria_phage	6.2e-42	69.4
WP_023149913.1\|1411371_1411710_+\|head	phage head closure protein	A0A2H4JHK5	uncultured_Caudovirales_phage	9.2e-41	73.2
WP_019705270.1\|1411706_1412156_+	HK97 gp10 family phage protein	Q9MCS9	Enterobacteria_phage	6.7e-63	82.6
WP_016530186.1\|1412152_1412500_+	DUF3168 domain-containing protein	K7PKL6	Enterobacterial_phage	2.8e-32	63.7
WP_024176424.1\|1412556_1413261_+	immunoglobulin domain-containing protein	K7PHL2	Enterobacterial_phage	3.3e-80	66.5
WP_023149911.1\|1413291_1413696_+\|tail	phage tail assembly chaperone	K7PKV6	Enterobacterial_phage	8.5e-33	57.7
WP_023149910.1\|1413698_1414004_+	DUF4035 domain-containing protein	Q9MCS5	Enterobacteria_phage	8.1e-28	63.6
WP_016530182.1\|1414076_1414310_+	hypothetical protein	K7PH16	Enterobacteria_phage	1.9e-08	47.2
WP_023149909.1\|1414370_1417757_+\|tail	phage tail tape measure protein	A0A0P0ZCJ4	Stx2-converting_phage	3.0e-304	57.9
WP_004884312.1\|1417778_1418252_+	hypothetical protein	A0A286S298	Klebsiella_phage	1.1e-55	62.7
WP_004864228.1\|1418238_1418715_+	DUF1833 family protein	A0A286S2B1	Klebsiella_phage	4.8e-51	65.8
WP_023149908.1\|1418727_1419108_+	hypothetical protein	A0A286S2A6	Klebsiella_phage	3.3e-55	78.6
WP_023149907.1\|1419104_1422182_+	hypothetical protein	A0A286S259	Klebsiella_phage	0.0e+00	62.1
WP_165696036.1\|1422258_1425186_+	SGNH/GDSL hydrolase family protein	A0A286S1P0	Klebsiella_phage	1.5e-38	62.8
1423372:1423387	attR	NA	NA	NA	NA
WP_165696037.1\|1425232_1426132_-	hypothetical protein	NA	NA	NA	NA
WP_001067855.1\|1427955_1428660_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000019444.1\|1429033_1430014_-\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	3.0e-185	99.4
WP_000609089.1\|1430861_1431755_+	GalU regulator GalF	A0A127AW70	Bacillus_phage	3.3e-45	40.3
WP_000154260.1\|1432199_1433216_+	UDP-glucose 4-epimerase GalE	A0A2K9L5H6	Tupanvirus	9.1e-84	47.6
WP_001048111.1\|1433249_1435466_+	glycosyltransferase	NA	NA	NA	NA
WP_000665069.1\|1435462_1436242_+	ABC transporter permease	NA	NA	NA	NA
WP_000018742.1\|1436248_1437001_+	O89/0101/0162 family O-antigen ABC transporter ATP-binding protein Wzt	W6JKT0	Anomala_cuprea_entomopoxvirus	1.1e-12	29.4
WP_001581568.1\|1437066_1438098_+	glycosyltransferase	NA	NA	NA	NA
WP_000684771.1\|1438107_1439262_+	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_000440491.1\|1439309_1440500_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_044067175.1\|1440503_1442585_+	glycosyltransferase	A0A2K9L4U1	Tupanvirus	2.5e-19	27.7
WP_000654804.1\|1442802_1443771_-\|transposase	IS5-like element IS903B family transposase	A0A1B0VFY5	Salmonella_phage	1.0e-185	99.4
WP_001333498.1\|1444369_1444627_+	transcriptional regulator	A0A2I7S995	Vibrio_phage	8.3e-18	65.7
WP_000217395.1\|1444797_1445289_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_000262446.1\|1445374_1445737_-	hypothetical protein	NA	NA	NA	NA
WP_001067855.1\|1445821_1446526_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_001130654.1\|1446663_1447782_-	glutamate--cysteine ligase	NA	NA	NA	NA
WP_000956455.1\|1448234_1448387_+	type I toxin-antitoxin system toxin HokE	NA	NA	NA	NA
WP_001300563.1\|1448463_1449576_+\|transposase	IS4-like element IS421 family transposase	NA	NA	NA	NA

DBSCAN-SWA_3

1728262 : 1796987

Salmonella_phage(68.0%)

integrase,protease,terminase,portal,head,capsid,tail,plate,lysis

attL 1725324:1725337|attR 1749170:1749183

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1725324:1725337	attL	NA	NA	NA	NA
WP_000290952.1\|1728262_1729294_-\|integrase	tyrosine-type recombinase/integrase	A0A218M4I3	Erwinia_phage	9.5e-105	55.8
WP_000900883.1\|1729482_1729674_-	hypothetical protein	A0A0R6PIH8	Moraxella_phage	6.8e-09	65.9
WP_001346406.1\|1729689_1730259_-	phage repressor protein CI	A0A1S6KZZ7	Salmonella_phage	3.2e-38	41.9
WP_000188450.1\|1730404_1730608_+	hypothetical protein	NA	NA	NA	NA
WP_000460893.1\|1730672_1731182_+	phage regulatory CII family protein	E5G6L3	Salmonella_phage	5.8e-87	98.8
WP_063082202.1\|1731189_1731486_+	DUF2724 domain-containing protein	E5G6L4	Salmonella_phage	4.9e-22	90.4
WP_063082203.1\|1731603_1731945_+	DUF5347 domain-containing protein	E5G6L5	Salmonella_phage	8.7e-55	97.3
WP_063082204.1\|1732012_1732246_+	DUF2732 family protein	E5G6L6	Salmonella_phage	7.0e-32	96.1
WP_000752619.1\|1732245_1732473_+	TraR/DksA family transcriptional regulator	E5G6L7	Salmonella_phage	3.5e-36	98.7
WP_021570731.1\|1732469_1733327_+	DNA adenine methylase	E5G6L8	Salmonella_phage	1.3e-160	96.8
WP_064770591.1\|1733323_1735738_+	replication endonuclease	E5G6L9	Salmonella_phage	0.0e+00	98.0
WP_001154431.1\|1735891_1736080_+	hypothetical protein	E5G6M0	Salmonella_phage	1.6e-26	96.8
WP_001217575.1\|1736090_1736324_+	DinI family protein	E5G6M1	Salmonella_phage	4.7e-36	100.0
WP_021542067.1\|1736829_1737948_+	DUF2971 domain-containing protein	NA	NA	NA	NA
WP_064770590.1\|1738203_1739877_+	hypothetical protein	NA	NA	NA	NA
WP_032248696.1\|1739908_1740937_-\|portal	phage portal protein	E5G6M3	Salmonella_phage	6.9e-172	88.5
WP_001098431.1\|1740936_1742703_-\|terminase	terminase ATPase subunit family protein	A0A1S6KZW3	Salmonella_phage	0.0e+00	99.7
WP_000216257.1\|1742845_1743679_+\|capsid	GPO family capsid scaffolding protein	A0A1S6KZW9	Salmonella_phage	2.2e-123	91.3
WP_064770589.1\|1743695_1744754_+\|capsid	phage major capsid protein, P2 family	E5G6M6	Salmonella_phage	1.9e-180	93.1
WP_064770588.1\|1744757_1745408_+\|terminase	terminase endonuclease subunit	E5G6M7	Salmonella_phage	9.6e-111	94.9
WP_000673520.1\|1745503_1745968_+\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	4.2e-76	89.0
WP_000868175.1\|1745967_1746171_+\|tail	tail protein X	E5G6M9	Salmonella_phage	1.4e-31	92.5
WP_000171568.1\|1746174_1746390_+	hypothetical protein	E5G6N0	Salmonella_phage	1.8e-26	80.3
WP_001069895.1\|1746370_1746883_+	lysozyme	E5G6N1	Salmonella_phage	4.4e-87	91.1
WP_064770587.1\|1746884_1747262_+	hypothetical protein	A0A1S6KZZ2	Salmonella_phage	5.1e-16	39.2
WP_064770586.1\|1747258_1747687_+\|lysis	LysB family phage lysis regulatory protein	E5G6N2	Salmonella_phage	2.3e-44	72.3
WP_069970521.1\|1747782_1748214_+\|tail	phage tail protein	E5G6N3	Salmonella_phage	2.2e-71	93.0
WP_064770584.1\|1748206_1748653_+	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	4.3e-62	84.2
WP_000993775.1\|1748721_1749300_+\|plate	phage baseplate assembly protein V	A0A1S6KZX7	Salmonella_phage	4.2e-94	87.0
1749170:1749183	attR	NA	NA	NA	NA
WP_000177590.1\|1749296_1749656_+\|plate	baseplate assembly protein	A0A1S6KZZ4	Salmonella_phage	9.5e-52	86.6
WP_023211146.1\|1749642_1750551_+\|plate	baseplate assembly protein	A0A1S6KZY6	Salmonella_phage	5.0e-142	90.1
WP_001086824.1\|1750543_1751149_+\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	1.8e-111	93.0
WP_064770583.1\|1751145_1752630_+\|tail	phage tail protein	M1TAS6	Escherichia_phage	3.0e-152	78.1
WP_001340317.1\|1752632_1752866_+	hypothetical protein	NA	NA	NA	NA
WP_032248699.1\|1752846_1753257_-\|tail	tail fiber assembly protein	B6SCW7	Bacteriophage	4.9e-20	43.3
WP_044077513.1\|1753259_1753766_-	hypothetical protein	NA	NA	NA	NA
WP_064770565.1\|1753796_1754363_+	recombinase family protein	A0A0F7LA37	Escherichia_phage	4.9e-87	86.3
WP_001420861.1\|1754505_1755678_+\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	4.6e-204	90.0
WP_001207660.1\|1755687_1756203_+\|tail	phage major tail tube protein	A0A1S6L002	Salmonella_phage	2.1e-89	95.3
WP_001281010.1\|1756257_1756560_+\|tail	phage tail assembly protein	A0A1S6KZZ9	Salmonella_phage	1.7e-38	88.0
WP_000763311.1\|1756574_1756694_+\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	2.8e-13	87.2
WP_064770564.1\|1756686_1759764_+\|tail	phage tail tape measure protein	E5G6Q1	Salmonella_phage	0.0e+00	62.9
WP_000980413.1\|1759760_1760246_+\|tail	phage tail protein	E5G6Q2	Salmonella_phage	6.3e-67	80.6
WP_001011797.1\|1760242_1761343_+	phage late control D family protein	A0A1S6KZZ5	Salmonella_phage	1.7e-176	88.0
WP_000972392.1\|1761433_1761652_+	hypothetical protein	Q53ZE7	Salmonella_virus	4.4e-20	69.0
WP_001024876.1\|1761887_1763573_-	aspartate:alanine antiporter	NA	NA	NA	NA
WP_000681108.1\|1763842_1764220_+	hypothetical protein	NA	NA	NA	NA
WP_001195240.1\|1764249_1764507_-	glutaredoxin 1	A0A2I7SAE2	Vibrio_phage	8.6e-23	61.9
WP_001201560.1\|1764666_1764954_+	DUF1418 family protein	NA	NA	NA	NA
WP_000189159.1\|1764937_1765660_+	nitroreductase NfsA	NA	NA	NA	NA
WP_000684321.1\|1765720_1766623_+	30S ribosomal protein S6--L-glutamate ligase	I3ULC9	Synechococcus_phage	2.6e-37	34.4
WP_000203025.1\|1766710_1767187_+	YbjN domain-containing protein	NA	NA	NA	NA
WP_000126072.1\|1767537_1768650_+	spermidine/putrescine ABC transporter substrate-binding protein PotF	NA	NA	NA	NA
WP_000996005.1\|1768744_1769878_+	putrescine ABC transporter ATP-binding subunit PotG	G3M9Y6	Bacillus_virus	1.4e-29	34.0
WP_000105430.1\|1769887_1770841_+	putrescine ABC transporter permease PotH	NA	NA	NA	NA
WP_001061658.1\|1770837_1771683_+	putrescine ABC transporter permease PotI	NA	NA	NA	NA
WP_000389260.1\|1771742_1772231_+	YbjO family protein	NA	NA	NA	NA
WP_001149682.1\|1772271_1773399_+	23S rRNA (uracil(747)-C(5))-methyltransferase RlmC	A0A1X9I6F4	Streptococcus_phage	1.0e-27	27.3
WP_001352074.1\|1773597_1774329_-	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_000464491.1\|1774619_1775288_-	arginine ABC transporter permease ArtM	NA	NA	NA	NA
WP_001001691.1\|1775287_1776004_-	arginine ABC transporter permease ArtQ	NA	NA	NA	NA
WP_000756569.1\|1776010_1776742_-	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_000027205.1\|1776759_1777488_-	arginine ABC transporter ATP-binding protein ArtP	G9BWD6	Planktothrix_phage	6.0e-29	36.7
WP_001270734.1\|1777705_1778221_-	lipoprotein	NA	NA	NA	NA
WP_001160737.1\|1778346_1778670_+	heavy metal-binding domain-containing protein	NA	NA	NA	NA
WP_001252135.1\|1778666_1779497_+	N-acetylmuramoyl-L-alanine amidase AmiD	A0A1B0UZW5	Roseobacter_phage	5.7e-07	30.0
WP_001338420.1\|1779493_1780507_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_001136554.1\|1780605_1782036_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_000566366.1\|1782046_1783048_-	low-specificity L-threonine aldolase	NA	NA	NA	NA
WP_000815337.1\|1783084_1784803_-	ubiquinone-dependent pyruvate dehydrogenase	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	2.3e-31	24.0
WP_000178676.1\|1784935_1785904_-	NADH oxidoreductase	NA	NA	NA	NA
WP_000458809.1\|1785915_1787568_-	hydroxylamine reductase	NA	NA	NA	NA
WP_000491142.1\|1787711_1788611_-	L-lysine exporter LysO	NA	NA	NA	NA
WP_001298299.1\|1789105_1789801_-	aquaporin Z	NA	NA	NA	NA
WP_000599825.1\|1790226_1791885_+	ATP-dependent endonuclease	NA	NA	NA	NA
WP_001340333.1\|1791881_1792832_-	DUF535 domain-containing protein	NA	NA	NA	NA
WP_000746443.1\|1792988_1794104_+	macrolide transporter subunit MacA	NA	NA	NA	NA
WP_000188144.1\|1794100_1796047_+	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	1.1e-37	40.1
WP_000410785.1\|1796119_1796344_-	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	2.3e-16	61.2
WP_000520781.1\|1796666_1796987_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	1.6e-13	44.4

DBSCAN-SWA_4

2844880 : 2942271

108

Klebsiella_phage(34.55%)

integrase,protease,terminase,portal,head,transposase,capsid,tail,holin

attL 2879772:2879831|attR 2912877:2912941

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_015674555.1\|2844880_2845405_+\|transposase	IS200/IS605 family transposase	A0A1S5RHE3	Helicobacter_phage	2.2e-33	60.0
WP_000879825.1\|2845561_2846359_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_001310919.1\|2846368_2846920_-	Raf kinase inhibitor-like protein YbcL	NA	NA	NA	NA
WP_005098738.1\|2847088_2847361_-	EmrE family multidrug efflux SMR transporter	NA	NA	NA	NA
WP_165696029.1\|2847388_2848616_-\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	2.9e-177	99.0
WP_001301376.1\|2849099_2849414_-	flagellar hook-basal body complex protein FliE	NA	NA	NA	NA
WP_000994473.1\|2849628_2851287_+	flagellar basal body M-ring protein FliF	NA	NA	NA	NA
WP_000067950.1\|2851279_2852275_+	flagellar motor switch protein FliG	NA	NA	NA	NA
WP_001282706.1\|2852267_2852954_+	flagellar assembly protein FliH	NA	NA	NA	NA
WP_000213294.1\|2852953_2854327_+	flagellum-specific ATP synthase FliI	NA	NA	NA	NA
WP_000807584.1\|2854345_2854789_+	flagella biosynthesis chaperone FliJ	NA	NA	NA	NA
WP_000620097.1\|2854785_2855913_+	flagellar hook length control protein FliK	NA	NA	NA	NA
WP_000133106.1\|2856017_2856482_+	flagellar basal body-associated protein FliL	NA	NA	NA	NA
WP_044067262.1\|2856486_2857530_+	flagellar motor switch protein FliM	NA	NA	NA	NA
WP_001282098.1\|2857526_2857940_+	flagellar motor switch protein FliN	NA	NA	NA	NA
WP_001059114.1\|2857942_2858308_+	flagellar type III secretion system protein FliO	NA	NA	NA	NA
WP_001253441.1\|2858307_2859045_+	flagellar type III secretion system pore protein FliP	NA	NA	NA	NA
WP_000187358.1\|2859054_2859324_+	flagellar biosynthesis protein FliQ	NA	NA	NA	NA
WP_000983976.1\|2859332_2860118_+	flagellar type III secretion system protein FliR	NA	NA	NA	NA
WP_071527558.1\|2861074_2861317_-	protein DsrB	NA	NA	NA	NA
WP_000844800.1\|2861425_2861653_+	peroxide/acid resistance protein YodD	NA	NA	NA	NA
WP_000949118.1\|2861950_2862766_+	mannosyl-3-phosphoglycerate phosphatase-related protein	NA	NA	NA	NA
WP_001581829.1\|2862801_2864457_-	cellulose biosynthesis regulator YedQ	A0A127AWB9	Bacillus_phage	2.7e-16	39.2
WP_000009307.1\|2864627_2864810_-	DUF2158 domain-containing protein	NA	NA	NA	NA
WP_000922683.1\|2864888_2865806_-	DUF808 domain-containing protein	NA	NA	NA	NA
WP_001212247.1\|2865978_2866899_+	drug/metabolite exporter YedA	NA	NA	NA	NA
WP_000786003.1\|2866887_2867358_-	VSPR family DNA mismatch endonuclease	E5E3X5	Burkholderia_phage	2.6e-33	47.6
WP_001157281.1\|2867338_2868757_-	DNA-cytosine methyltransferase	E5E3X6	Burkholderia_phage	9.4e-103	55.8
WP_000365560.1\|2868823_2869519_-	phosphohydrolase	A0A1D6Y7U0	Golden_Marseillevirus	1.4e-06	27.4
WP_072146742.1\|2869558_2869924_-	permease	NA	NA	NA	NA
WP_000824371.1\|2870491_2871550_+	outer membrane protein F	Q1MVN1	Enterobacteria_phage	3.3e-92	49.1
WP_001581832.1\|2872141_2872993_+	protein deglycase HchA	NA	NA	NA	NA
WP_000826783.1\|2873100_2874459_-	two-component system sensor histidine kinase HprS	Q8QKV7	Ectocarpus_siliculosus_virus	5.1e-05	19.4
WP_001340597.1\|2874458_2875130_-	response regulator transcription factor HprR	W8CYM9	Bacillus_phage	1.4e-32	35.6
WP_000920132.1\|2875262_2875676_+	hydroxyisourate hydrolase	NA	NA	NA	NA
WP_000740078.1\|2875783_2876788_+	protein-methionine-sulfoxide reductase catalytic subunit MsrP	NA	NA	NA	NA
WP_001240088.1\|2876788_2877424_+	protein-methionine-sulfoxide reductase heme-binding subunit MsrQ	NA	NA	NA	NA
WP_001007765.1\|2877680_2878331_+	metal-binding protein ZinT	NA	NA	NA	NA
WP_001079084.1\|2878673_2879204_+	cytochrome b	A0A0U2QLA7	Escherichia_phage	1.9e-56	100.0
2879772:2879831	attL	NA	NA	NA	NA
WP_044067271.1\|2880106_2880433_-	hypothetical protein	K7PGV5	Enterobacterial_phage	4.3e-27	53.9
WP_023149922.1\|2880435_2880675_-	hypothetical protein	I6PD82	Cronobacter_phage	3.4e-21	54.4
WP_001067855.1\|2881228_2881933_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_044067351.1\|2882350_2885419_-	kinase	A0A286S259	Klebsiella_phage	0.0e+00	97.8
WP_017880229.1\|2885415_2885796_-	hypothetical protein	A0A286S2A6	Klebsiella_phage	4.6e-73	100.0
WP_044067353.1\|2885805_2886288_-	DUF1833 family protein	A0A286S2B1	Klebsiella_phage	6.3e-83	96.2
WP_044067354.1\|2886274_2886754_-	hypothetical protein	A0A286S298	Klebsiella_phage	8.6e-93	98.1
WP_000019444.1\|2887499_2888480_-\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	3.0e-185	99.4
WP_165696041.1\|2888476_2888905_-\|tail	phage tail protein	A0A286S1N4	Klebsiella_phage	8.6e-60	97.4
WP_000115125.1\|2888948_2889440_-	hypothetical protein	A0A286S1Q8	Klebsiella_phage	2.3e-88	100.0
WP_044067365.1\|2889496_2889862_-	DUF3168 domain-containing protein	A0A286S1R1	Klebsiella_phage	1.0e-61	92.6
WP_004216814.1\|2889858_2890398_-	HK97 gp10 family phage protein	A0A286S249	Klebsiella_phage	3.0e-94	99.4
WP_040213580.1\|2890390_2890723_-\|head	phage head closure protein	A0A286S2A2	Klebsiella_phage	2.0e-56	98.2
WP_004143899.1\|2890724_2890922_-	hypothetical protein	A0A286S2A5	Klebsiella_phage	1.7e-26	100.0
WP_017880223.1\|2890982_2891309_-\|head,tail	phage gp6-like head-tail connector protein	A0A286S294	Klebsiella_phage	7.5e-56	100.0
WP_044067369.1\|2891256_2891499_-	hypothetical protein	NA	NA	NA	NA
WP_040174769.1\|2891535_2892699_-\|capsid	phage major capsid protein	A0A286S1R4	Klebsiella_phage	2.7e-212	100.0
WP_004216821.1\|2892710_2893391_-\|head,protease	HK97 family phage prohead protease	A0A286S1N1	Klebsiella_phage	1.6e-124	100.0
WP_044067370.1\|2893396_2894674_-\|portal	phage portal protein	A0A286S1N5	Klebsiella_phage	1.4e-246	99.8
WP_004143904.1\|2894676_2896209_-\|terminase	terminase	A0A286S1M9	Klebsiella_phage	3.9e-296	100.0
WP_004143905.1\|2896218_2896653_-	hypothetical protein	A0A286S1P9	Klebsiella_phage	6.2e-74	100.0
WP_044067371.1\|2896775_2896985_-	hypothetical protein	A0A286N2R4	Klebsiella_phage	3.4e-17	65.2
WP_044067372.1\|2896997_2897288_-	HNH endonuclease	A0A286N2R3	Klebsiella_phage	3.4e-52	95.8
WP_042950192.1\|2897344_2897566_-	hypothetical protein	NA	NA	NA	NA
WP_044067374.1\|2897632_2897878_-	DUF2560 family protein	A0A286N2R1	Klebsiella_phage	6.7e-33	95.1
WP_014837649.1\|2898013_2898190_-	hypothetical protein	NA	NA	NA	NA
WP_044067377.1\|2898173_2898653_-	lysozyme	A0A0M4R365	Salmonella_phage	1.4e-58	71.1
WP_044067379.1\|2898636_2898981_-\|holin	phage holin, lambda family	Q8SBE1	Shigella_phage	5.9e-35	65.1
WP_040186320.1\|2899235_2899715_+	hypothetical protein	F1C594	Cronobacter_phage	2.2e-40	55.6
WP_040186317.1\|2899797_2900376_-	DUF1133 family protein	A0A0U2S606	Escherichia_phage	3.2e-49	56.7
WP_040186316.1\|2900389_2901370_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	5.4e-134	66.6
WP_023317574.1\|2901382_2901760_-	RusA family crossover junction endodeoxyribonuclease	A0A1C9IIA0	Salmonella_phage	6.7e-48	75.2
WP_072021077.1\|2901769_2902474_-	Dam family site-specific DNA-(adenine-N6)-methyltransferase	A0A1C9II58	Salmonella_phage	8.5e-89	59.2
WP_044067381.1\|2902470_2903385_-	transcriptional regulator	H2DE83	Erwinia_phage	1.4e-30	60.6
WP_023317571.1\|2903341_2903554_-	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	2.2e-16	72.7
WP_000230161.1\|2903791_2904253_-	hypothetical protein	K7PJS5	Enterobacterial_phage	3.8e-69	87.5
WP_016530206.1\|2904278_2904476_-	hypothetical protein	H9C161	Pectobacterium_phage	2.7e-16	66.1
WP_032408726.1\|2904580_2905228_+	helix-turn-helix domain-containing protein	H9C160	Pectobacterium_phage	9.3e-74	63.0
WP_044067386.1\|2905675_2906593_+	recombination-associated protein RdgC	A0A1W6JP69	Morganella_phage	8.9e-46	36.5
WP_044067387.1\|2906682_2906982_+	hypothetical protein	K7PJS4	Enterobacterial_phage	2.1e-12	46.7
WP_044067388.1\|2906981_2907767_+	hypothetical protein	A4JX52	Burkholderia_virus	7.6e-62	51.0
WP_044067390.1\|2907894_2908239_+	hypothetical protein	NA	NA	NA	NA
WP_040027457.1\|2908231_2908714_+	class I SAM-dependent methyltransferase	H9C170	Pectobacterium_phage	9.4e-71	81.6
WP_044067392.1\|2908710_2908980_+	hypothetical protein	NA	NA	NA	NA
WP_044067393.1\|2908976_2909630_+	ead/Ea22-like family protein	A0A0F6R7P8	Escherichia_coli_O157_typing_phage	1.4e-40	47.1
WP_044067394.1\|2909630_2910011_+	HNH endonuclease	K7P7B7	Enterobacteria_phage	3.9e-64	93.6
WP_157839020.1\|2910007_2911237_+	DUF550 domain-containing protein	A0A0M4RTV1	Salmonella_phage	4.0e-49	43.0
WP_004184757.1\|2911544_2911772_+	DUF4224 domain-containing protein	Q8HAA9	Salmonella_phage	1.1e-29	78.4
WP_004184758.1\|2911773_2912766_+\|integrase	tyrosine-type recombinase/integrase	A0A192Y7M7	Salmonella_phage	4.9e-175	87.2
WP_001302302.1\|2913061_2913859_+	DgsA anti-repressor MtfA	NA	NA	NA	NA
2912877:2912941	attR	NA	NA	NA	NA
WP_000378546.1\|2917510_2918827_+	shikimate transporter	NA	NA	NA	NA
WP_001060228.1\|2918928_2920383_+	AMP nucleosidase	NA	NA	NA	NA
WP_000532923.1\|2920725_2921442_+	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_001011022.1\|2923833_2924784_-	HTH-type transcriptional regulator Cbl	NA	NA	NA	NA
WP_001011483.1\|2924885_2925803_-	nitrogen assimilation transcriptional regulator	NA	NA	NA	NA
WP_000986345.1\|2926259_2927195_-	L,D-transpeptidase	NA	NA	NA	NA
WP_001193803.1\|2927256_2928336_-	nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase	NA	NA	NA	NA
WP_001333892.1\|2928347_2929091_-	adenosylcobinamide-GDP ribazoletransferase	NA	NA	NA	NA
WP_000973199.1\|2929087_2929633_-	bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase	NA	NA	NA	NA
WP_000881502.1\|2930556_2931489_+	DMT family transporter	NA	NA	NA	NA
WP_000656349.1\|2931491_2932526_+	phosphotriesterase	NA	NA	NA	NA
WP_001221632.1\|2934841_2935252_-	hypothetical protein	NA	NA	NA	NA
WP_000270979.1\|2936415_2936808_-	hypothetical protein	NA	NA	NA	NA
WP_000221544.1\|2937067_2937637_-	inovirus Gp2 family protein	NA	NA	NA	NA
WP_001447094.1\|2938381_2938558_-	hemolysin activation protein	NA	NA	NA	NA
WP_000840364.1\|2938858_2939125_-	hypothetical protein	NA	NA	NA	NA
WP_001329787.1\|2939193_2939472_+	AlpA family transcriptional regulator	NA	NA	NA	NA
WP_000813456.1\|2939566_2940169_+	hypothetical protein	NA	NA	NA	NA
WP_001333339.1\|2940735_2942271_-\|transposase	IS66-like element ISEc22 family transposase	A0A0P0ZEB3	Stx2-converting_phage	3.5e-289	99.4

DBSCAN-SWA_5

2964197 : 2972078

Escherichia_phage(42.86%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_096058022.1\|2964197_2965178_-\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	1.2e-184	99.1
WP_044067410.1\|2965650_2966817_-	UDP-glucose 6-dehydrogenase	M1I798	Paramecium_bursaria_Chlorella_virus	1.2e-111	54.5
WP_004175260.1\|2966996_2967551_-	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	1.9e-51	57.6
WP_004175259.1\|2967565_2968456_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	2.8e-28	34.2
WP_004175258.1\|2968487_2969357_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	5.7e-111	67.0
WP_023149889.1\|2969383_2970448_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	7.5e-105	55.0
WP_023149888.1\|2970671_2972078_-	NADP-dependent phosphogluconate dehydrogenase	M4QQM4	Ostreococcus_lucimarinus_virus	2.8e-38	28.7

DBSCAN-SWA_6

3067659 : 3077877

Enterobacteria_phage(75.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001292769.1\|3067659_3068796_+	VWA domain-containing protein	Q9EYF7	Enterobacteria_phage	3.2e-162	97.4
WP_001446943.1\|3068792_3070793_+	hypothetical protein	Q9EYF6	Enterobacteria_phage	0.0e+00	96.0
WP_103758571.1\|3070946_3071644_-\|transposase	IS1 family transposase	A0A077SLN4	Escherichia_phage	1.1e-131	98.7
WP_000741419.1\|3071685_3072156_+	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	3.6e-75	100.0
WP_000950409.1\|3072195_3072666_-	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	5.2e-82	100.0
WP_000598641.1\|3072712_3073432_-	two-component system response regulator BtsR	NA	NA	NA	NA
WP_001295431.1\|3073428_3075114_-	two-component regulatory system sensor histidine kinase BtsS	Q9EYF3	Enterobacteria_phage	2.5e-304	99.6
WP_001240401.1\|3075335_3076067_+	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	9.7e-112	99.5
WP_001216963.1\|3076126_3076234_+	protein YohO	NA	NA	NA	NA
WP_000783120.1\|3076214_3076946_-	glycine betaine ABC transporter permease YehW	NA	NA	NA	NA
WP_000569356.1\|3076950_3077877_-	glycine betaine ABC transporter ATP binding protein YehX	G3M9Y6	Bacillus_virus	1.7e-23	30.8

DBSCAN-SWA_7

3559516 : 3684317

117

Enterobacteria_phage(34.43%)

integrase,lysis,terminase,portal,transposase,capsid,head,tail,holin

attL 3612530:3612544|attR 3680415:3680461

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_113708090.1\|3559516_3560745_-\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	2.2e-177	99.0
WP_001333670.1\|3561075_3561891_-	hypothetical protein	NA	NA	NA	NA
WP_000692754.1\|3562133_3563183_-	NADPH-dependent aldehyde reductase YahK	A0A0G2YAX3	Acanthamoeba_polyphaga_mimivirus	2.8e-72	42.6
WP_000023635.1\|3564251_3564857_-	ankyrin repeat domain-containing protein	NA	NA	NA	NA
WP_001013892.1\|3565114_3565612_+	DUF1097 domain-containing protein	NA	NA	NA	NA
WP_001084399.1\|3565703_3566636_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_001301264.1\|3566677_3567766_-	DNA-binding transcriptional activator/c-di-GMP phosphodiesterase PdeL	NA	NA	NA	NA
WP_120795374.1\|3568260_3568335_-	protein YahV	NA	NA	NA	NA
WP_000131044.1\|3568640_3570674_-\|holin	choline BCCT transporter BetT	A0A2I7QNT1	Vibrio_phage	3.4e-21	27.4
WP_001335745.1\|3570802_3571390_+	transcriptional regulator BetI	NA	NA	NA	NA
WP_000089110.1\|3571403_3572876_+	betaine-aldehyde dehydrogenase	NA	NA	NA	NA
WP_001159094.1\|3572889_3574560_+\|holin	choline dehydrogenase	A0A1V0S9M4	Catovirus	4.7e-61	31.2
WP_001209100.1\|3574772_3575441_+	hypothetical protein	NA	NA	NA	NA
WP_000370307.1\|3575683_3576379_-	lactate utilization protein C	NA	NA	NA	NA
WP_000023927.1\|3576371_3577799_-	iron-sulfur cluster-binding protein	NA	NA	NA	NA
WP_001102108.1\|3577809_3578529_-	(Fe-S)-binding protein	NA	NA	NA	NA
WP_000339594.1\|3579055_3579910_-	DNA-binding transcriptional regulator RclR	NA	NA	NA	NA
WP_001046307.1\|3580135_3581461_+	pyridine nucleotide-disulfide oxidoreductase	A0A2K5B2C5	Erysipelothrix_phage	2.5e-113	47.6
WP_000474084.1\|3581569_3581806_+	DUF1471 domain-containing protein	NA	NA	NA	NA
WP_001299021.1\|3581817_3582411_+	reactive chlorine species resistance protein RclC	NA	NA	NA	NA
WP_000621009.1\|3583000_3583852_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_000020221.1\|3583991_3588248_-	intimin-like adhesin FdeC	NA	NA	NA	NA
WP_000662258.1\|3589363_3589465_+	hypothetical protein	NA	NA	NA	NA
WP_000803998.1\|3589828_3590092_+	type B 50S ribosomal protein L31	NA	NA	NA	NA
WP_000866436.1\|3590091_3590232_+	50S ribosomal protein L36	NA	NA	NA	NA
WP_001147279.1\|3590266_3590494_-	hypothetical protein	NA	NA	NA	NA
WP_000654804.1\|3592634_3593603_-\|transposase	IS5-like element IS903B family transposase	A0A1B0VFY5	Salmonella_phage	1.0e-185	99.4
WP_000730972.1\|3593776_3594364_+	common pilus major fimbrillin subunit EcpA	NA	NA	NA	NA
WP_000716398.1\|3594421_3595090_+	fimbrial chaperone EcpB	NA	NA	NA	NA
WP_001131096.1\|3595115_3597641_+	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_001310578.1\|3597630_3599274_+	fimbrial adhesin EcpD	NA	NA	NA	NA
WP_001350485.1\|3599242_3599953_+	fimbrial chaperone EcpE	NA	NA	NA	NA
WP_001303809.1\|3600265_3600595_+	YkgJ family cysteine cluster protein	NA	NA	NA	NA
WP_001019920.1\|3600842_3601457_-	YagU family protein	NA	NA	NA	NA
WP_000070700.1\|3601874_3602564_+	aldehyde dehydrogenase iron-sulfur subunit	NA	NA	NA	NA
WP_000643333.1\|3602560_3603517_+	aldehyde oxidoreductase FAD-binding subunit PaoB	NA	NA	NA	NA
WP_000667026.1\|3603513_3605712_+	aldehyde oxidoreductase molybdenum-binding subunit PaoC	A0A0P0I429	Acinetobacter_phage	2.5e-38	25.8
WP_000121359.1\|3605721_3606678_+	molybdenum cofactor insertion chaperone PaoD	NA	NA	NA	NA
WP_001111348.1\|3606656_3607067_+	hypothetical protein	NA	NA	NA	NA
WP_032739138.1\|3607740_3609276_+	recombinase family protein	NA	NA	NA	NA
WP_032673146.1\|3609276_3610149_+	ParB N-terminal domain-containing protein	NA	NA	NA	NA
WP_044067310.1\|3610157_3611030_+	ParB N-terminal domain-containing protein	NA	NA	NA	NA
WP_044067311.1\|3611033_3612638_-	TIGR04141 family sporadically distributed protein	NA	NA	NA	NA
3612530:3612544	attL	NA	NA	NA	NA
WP_001415597.1\|3612658_3613291_-	His-Xaa-Ser repeat protein HxsA	NA	NA	NA	NA
3612530:3612544	attL	NA	NA	NA	NA
WP_012134292.1\|3613287_3614400_-	His-Xaa-Ser system radical SAM maturase HxsC	NA	NA	NA	NA
WP_044067315.1\|3614392_3615781_-	His-Xaa-Ser system radical SAM maturase HxsB	S5VT21	Leptospira_phage	2.4e-50	28.4
WP_023279391.1\|3615780_3616053_-	His-Xaa-Ser system protein HxsD	NA	NA	NA	NA
WP_044067317.1\|3616737_3617250_+	hypothetical protein	NA	NA	NA	NA
WP_000157695.1\|3617721_3618816_+	hypothetical protein	NA	NA	NA	NA
WP_044067131.1\|3618808_3620053_+	hypothetical protein	NA	NA	NA	NA
WP_023279388.1\|3620236_3620674_+	hypothetical protein	NA	NA	NA	NA
WP_044067136.1\|3620642_3621914_+	relaxase/mobilization nuclease domain-containing protein	NA	NA	NA	NA
WP_044067138.1\|3622218_3622884_+	hypothetical protein	NA	NA	NA	NA
WP_044067140.1\|3622941_3623355_-	hypothetical protein	NA	NA	NA	NA
WP_001052044.1\|3623452_3623851_-	hypothetical protein	NA	NA	NA	NA
WP_077779991.1\|3625165_3626260_-	conserved DNA-binding protein	NA	NA	NA	NA
WP_044067885.1\|3626256_3627570_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_032739159.1\|3627571_3628777_-\|integrase	site-specific integrase	NA	NA	NA	NA
WP_001075424.1\|3629157_3629364_-	AlpA family transcriptional regulator	NA	NA	NA	NA
WP_001412615.1\|3629454_3630312_-	hypothetical protein	NA	NA	NA	NA
3629373:3629387	attR	NA	NA	NA	NA
WP_001412614.1\|3630460_3631675_-\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	3.8e-129	54.4
3629373:3629387	attR	NA	NA	NA	NA
WP_001619161.1\|3632643_3633489_+	ParA family protein	A0A1X9IGI7	Lactococcus_phage	5.0e-35	38.0
WP_001041461.1\|3633481_3633880_+	hypothetical protein	NA	NA	NA	NA
WP_085947771.1\|3634257_3635420_-\|transposase	IS3-like element IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	3.1e-51	40.6
WP_000834404.1\|3636736_3638626_+	DUF262 domain-containing protein	NA	NA	NA	NA
WP_001185479.1\|3639228_3640260_-	hypothetical protein	A0A0U2SAV1	Escherichia_phage	1.2e-11	37.3
WP_165696045.1\|3644413_3645955_-\|transposase	IS66-like element ISEc22 family transposase	A0A0P0ZEB3	Stx2-converting_phage	3.1e-293	99.2
WP_000612626.1\|3646003_3646351_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.6e-62	100.0
WP_000839179.1\|3646347_3646752_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	3.0e-70	100.0
WP_061363450.1\|3647248_3650647_-	host specificity protein J	K7PKJ2	Enterobacteria_phage	0.0e+00	88.1
WP_122991788.1\|3650707_3651310_-\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	4.0e-87	84.7
WP_061363449.1\|3651246_3651990_-\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	2.6e-144	94.7
WP_000459458.1\|3652625_3653060_-\|tail	phage tail assembly protein T	A0A0K2FJB3	Enterobacteria_phage	1.5e-64	99.2
WP_000479155.1\|3653041_3653464_-\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	1.9e-72	99.3
WP_001446995.1\|3653479_3654220_-\|tail	phage tail protein	A0A0K2FJ05	Enterobacteria_phage	2.1e-130	98.0
WP_000683105.1\|3654227_3654623_-\|tail	tail protein	A0A0K2FIF4	Enterobacteria_phage	1.0e-70	100.0
WP_000975085.1\|3654619_3655198_-\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	5.9e-80	99.0
WP_000753001.1\|3655209_3655563_-\|tail	tail attachment protein	A0A2R9YJJ5	Escherichia_phage	4.4e-62	97.4
WP_000158886.1\|3655574_3655970_-	hypothetical protein	A0A2R9YJP4	Escherichia_phage	1.2e-52	90.9
WP_000063273.1\|3656011_3657037_-\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	2.9e-186	96.8
WP_001380322.1\|3657092_3657425_-\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	6.5e-55	99.1
WP_000123280.1\|3657434_3658754_-	S49 family peptidase	A0A2I6TC87	Escherichia_phage	1.5e-232	98.4
WP_096058034.1\|3658734_3660336_-\|portal	phage portal protein	A0A0K2FJC0	Enterobacteria_phage	1.0e-307	98.7
WP_000198149.1\|3660332_3660539_-\|head,tail	Lambda prophage-derived head-to-tail joining protein W	A0A2R9YJL2	Escherichia_phage	5.8e-30	100.0
WP_001027290.1\|3660535_3662461_-\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	0.0e+00	99.8
WP_000453576.1\|3662435_3662981_-	DNA-packaging protein	A0A0K2FIG2	Enterobacteria_phage	4.7e-95	99.4
WP_001663509.1\|3663369_3663603_+	YlcI/YnfO family protein	A0A0K2FIR8	Escherichia_phage	2.5e-21	96.3
WP_000079508.1\|3663659_3664070_+	DUF1398 family protein	C6ZCX4	Enterobacteria_phage	1.3e-52	76.3
WP_001139678.1\|3664420_3664573_-	hypothetical protein	K7PKL2	Enterobacteria_phage	3.1e-20	96.0
WP_001446997.1\|3664560_3664998_-\|lysis	lysis protein	Q716B4	Shigella_phage	3.0e-68	95.9
WP_001197767.1\|3664994_3665471_-	glycoside hydrolase family protein	K7PKV2	Enterobacteria_phage	1.9e-84	95.5
WP_001120502.1\|3665474_3665810_-\|holin	phage holin, lambda family	Q8SBE1	Shigella_phage	5.2e-60	100.0
WP_021548833.1\|3665886_3666939_-	site-specific DNA-methyltransferase	A5LH81	Enterobacteria_phage	6.3e-205	98.3
WP_000917724.1\|3667089_3667293_-	hypothetical protein	A0A291AWX6	Escherichia_phage	6.1e-32	100.0
WP_001446998.1\|3667561_3668503_+	hypothetical protein	A5LH79	Enterobacteria_phage	5.0e-68	44.2
WP_001208502.1\|3668524_3668974_+	hypothetical protein	A5LH78	Enterobacteria_phage	8.0e-24	43.8
WP_085949407.1\|3669009_3669378_-	antitermination protein Q	A5LH77	Enterobacteria_phage	9.4e-55	87.5
WP_001571227.1\|3669392_3670382_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	9.5e-195	99.7
WP_001061412.1\|3670389_3671187_-	KilA-N domain-containing protein	A0A0P0ZCS0	Stx2-converting_phage	1.5e-150	99.6
WP_061363473.1\|3671206_3671596_-	RusA family crossover junction endodeoxyribonuclease	A0A0P0ZD39	Stx2-converting_phage	1.3e-67	98.4
WP_000210148.1\|3671592_3671919_-	LexA family transcriptional regulator	A0A0N7KZF7	Stx2-converting_phage	1.0e-52	98.1
WP_001573323.1\|3671918_3672413_-	PerC family transcriptional regulator	A0A0P0ZCF0	Stx2-converting_phage	6.2e-86	97.5
WP_000104985.1\|3672409_3673366_-	helix-turn-helix domain-containing protein	U5P0A0	Shigella_phage	7.6e-149	96.5
WP_001250269.1\|3673355_3673535_-	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	7.8e-15	68.5
WP_000515847.1\|3673710_3674262_-	hypothetical protein	S5FXP0	Shigella_phage	2.9e-100	98.4
WP_000205494.1\|3674299_3674500_-	cell division protein	NA	NA	NA	NA
WP_000450738.1\|3674597_3675224_+	LexA family transcriptional regulator	K7PM82	Enterobacteria_phage	2.5e-47	48.8
WP_000559916.1\|3675451_3675967_-	hypothetical protein	NA	NA	NA	NA
WP_000135682.1\|3676436_3676799_+	hypothetical protein	U5P4J6	Shigella_phage	3.3e-60	100.0
WP_096058035.1\|3676864_3677689_+	DUF2303 family protein	U5P439	Shigella_phage	3.9e-149	99.6
WP_000008200.1\|3677816_3678353_+	5'-deoxynucleotidase	U5P0T3	Shigella_phage	4.3e-101	100.0
WP_001242749.1\|3678343_3678706_+	phage protein	U5P092	Shigella_phage	2.1e-67	100.0
WP_000206734.1\|3678705_3679011_+	hypothetical protein	U5P0J0	Shigella_phage	2.6e-50	99.0
WP_000051887.1\|3679237_3680401_+\|integrase	site-specific integrase	U5P434	Shigella_phage	2.4e-229	100.0
WP_000893278.1\|3680605_3681859_-	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	9.8e-96	47.2
WP_001285288.1\|3681870_3682974_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	1.1e-61	40.4
WP_000749867.1\|3683261_3684317_+	phosphoporin PhoE	Q1MVN1	Enterobacteria_phage	1.6e-118	61.1

DBSCAN-SWA_8

3694451 : 3753710

uncultured_Caudovirales_phage(20.0%)

tRNA,transposase,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000006255.1\|3694451_3694949_-\|transposase	REP-associated tyrosine transposase RayT	NA	NA	NA	NA
WP_000056849.1\|3695124_3695874_-	C40 family peptidase	A0A1V0DZX6	Clostridioides_phage	9.0e-20	38.5
WP_000729703.1\|3696083_3696344_+	type II toxin-antitoxin system antitoxin DinJ	NA	NA	NA	NA
WP_000615983.1\|3696346_3696625_+	type II toxin-antitoxin system mRNA interferase toxin YafQ	NA	NA	NA	NA
WP_001225679.1\|3696780_3697521_+	murein L,D-transpeptidase	NA	NA	NA	NA
WP_000333380.1\|3697491_3698259_-	class II glutamine amidotransferase	NA	NA	NA	NA
WP_000284050.1\|3698464_3699043_-	D-sedoheptulose 7-phosphate isomerase	A0A067XQR2	Caulobacter_phage	1.1e-14	32.0
WP_000973083.1\|3699282_3701727_+	acyl-CoA dehydrogenase FadE	NA	NA	NA	NA
WP_000532698.1\|3701769_3702243_-	C-lysozyme inhibitor	NA	NA	NA	NA
WP_001118036.1\|3702396_3703167_+	2-oxoglutaramate amidase	NA	NA	NA	NA
WP_000420818.1\|3703207_3704344_-\|transposase	ISAs1 family transposase	NA	NA	NA	NA
WP_001101839.1\|3704774_3705167_-	hypothetical protein	NA	NA	NA	NA
WP_000508724.1\|3705144_3709377_-	RHS repeat protein	A0A2H4JHK7	uncultured_Caudovirales_phage	6.4e-22	43.1
WP_000103354.1\|3709452_3711594_-	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	2.4e-25	25.0
WP_001142958.1\|3711803_3712322_-	Hcp family type VI secretion system effector	NA	NA	NA	NA
WP_000037397.1\|3713016_3713517_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_000123970.1\|3713551_3713776_+	hypothetical protein	NA	NA	NA	NA
WP_000056989.1\|3713826_3715302_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_000611744.1\|3715308_3715722_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_000393852.1\|3715725_3717576_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_000348793.1\|3717539_3718622_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_001113719.1\|3718646_3719927_+	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA
WP_001080149.1\|3719923_3720448_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_000246442.1\|3720450_3721782_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_000343289.1\|3721786_3722548_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_000614325.1\|3722556_3725322_+	type VI secretion system ATPase TssH	K4FB40	Cronobacter_phage	1.8e-81	30.8
WP_000088852.1\|3725318_3726062_+	type VI secretion system-associated protein TagO	NA	NA	NA	NA
WP_001240525.1\|3726066_3727479_+	type VI secretion system protein TssA	NA	NA	NA	NA
WP_122545204.1\|3727587_3731022_+	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_001087741.1\|3731032_3732385_+	membrane protein	NA	NA	NA	NA
WP_001284199.1\|3732408_3732891_+	Hcp family type VI secretion system effector	NA	NA	NA	NA
WP_000908066.1\|3732934_3733849_+	hypothetical protein	NA	NA	NA	NA
WP_001236645.1\|3733858_3734338_+	hypothetical protein	NA	NA	NA	NA
WP_001086141.1\|3734474_3735260_-	lipoprotein	NA	NA	NA	NA
WP_001340895.1\|3735796_3736528_-	DNA polymerase III subunit epsilon	A0A1X9SH08	Bradyrhizobium_phage	4.5e-40	39.0
WP_000917883.1\|3736592_3737060_+	ribonuclease HI	J9Q745	Salmonella_phage	1.0e-50	58.7
WP_001326702.1\|3737056_3737779_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_001052715.1\|3737812_3738568_+	hydroxyacylglutathione hydrolase	NA	NA	NA	NA
WP_000644685.1\|3738639_3739998_+	murein transglycosylase D	A0A2H4J9N7	uncultured_Caudovirales_phage	5.8e-09	36.0
WP_000016007.1\|3740045_3740669_-	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_001230983.1\|3740672_3741473_-	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA
WP_000648572.1\|3741713_3742628_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_000997010.1\|3742624_3743428_-	2,5-didehydrogluconate reductase DkgB	A0A1V0SDE7	Indivirus	2.4e-39	36.2
WP_001140187.1\|3749188_3749764_-	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA
WP_000594006.1\|3749951_3750983_+	methionine ABC transporter ATP-binding protein MetN	G9BWD6	Planktothrix_phage	9.4e-36	39.7
WP_001294600.1\|3750975_3751629_+	methionine ABC transporter permease MetI	NA	NA	NA	NA
WP_000874226.1\|3751668_3752484_+	methionine ABC transporter substrate-binding lipoprotein MetQ	NA	NA	NA	NA
WP_001202329.1\|3752601_3753006_+	Rcs stress response system protein RcsF	NA	NA	NA	NA
WP_000094011.1\|3753002_3753710_+\|tRNA	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	NA	NA	NA	NA

DBSCAN-SWA_9

4091123 : 4166171

Enterobacteria_phage(21.05%)

integrase,transposase,tRNA,protease

attL 4120381:4120397|attR 4140478:4140494

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001254928.1\|4091123_4092275_+\|transposase	IS30-like element IS30 family transposase	W5R8L2	Staphylococcus_phage	2.2e-41	35.3
WP_001293435.1\|4093331_4095329_+	BCCT family transporter	A0A2I7QNT1	Vibrio_phage	7.4e-21	25.9
WP_001446913.1\|4095391_4096669_+	DUF2254 domain-containing protein	NA	NA	NA	NA
WP_000145475.1\|4096916_4097573_+	TetR family transcriptional regulator	NA	NA	NA	NA
WP_126123275.1\|4097753_4097864_-	alcohol dehydrogenase	NA	NA	NA	NA
WP_001390361.1\|4097972_4098254_-	hypothetical protein	NA	NA	NA	NA
WP_001387298.1\|4098980_4099079_+	acetolactate synthase	NA	NA	NA	NA
WP_001295538.1\|4099080_4099863_-	DeoR family transcriptional regulator	NA	NA	NA	NA
WP_000350265.1\|4100168_4101089_+	ribokinase	NA	NA	NA	NA
WP_000998347.1\|4101116_4102433_+	L-fucose:H+ symporter permease	NA	NA	NA	NA
WP_000107480.1\|4102444_4103458_+	aldose 1-epimerase family protein	NA	NA	NA	NA
WP_000422741.1\|4104774_4105200_+	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	1.5e-48	99.0
WP_000624722.1\|4105196_4105547_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	4.7e-40	66.4
WP_000080200.1\|4105577_4107191_+\|transposase	IS66-like element ISEc23 family transposase	A0A0P0ZEB3	Stx2-converting_phage	1.8e-182	63.6
WP_001446914.1\|4107801_4108041_+	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	1.5e-13	66.0
WP_000345346.1\|4108251_4109508_-	PTS ascorbate transporter subunit IIC	NA	NA	NA	NA
WP_000705931.1\|4109520_4109808_-	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_000916805.1\|4109823_4110267_-	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_000416153.1\|4110537_4111569_+	LacI family DNA-binding transcriptional regulator	C6ZCU4	Enterobacteria_phage	8.0e-19	27.0
WP_001375333.1\|4112919_4113354_-	RNA-directed DNA polymerase	NA	NA	NA	NA
WP_001352291.1\|4114262_4114589_+	hypothetical protein	NA	NA	NA	NA
WP_000228394.1\|4114798_4115143_-	hypothetical protein	NA	NA	NA	NA
WP_000981734.1\|4115497_4116847_-	MFS transporter	NA	NA	NA	NA
WP_000102863.1\|4116867_4117785_-	hydroxymethylglutaryl-CoA lyase	NA	NA	NA	NA
WP_001041752.1\|4117796_4118993_-	CoA transferase	NA	NA	NA	NA
WP_000018562.1\|4119229_4121143_+	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA
4120381:4120397	attL	NA	NA	NA	NA
WP_000255944.1\|4122176_4123199_+\|transposase	IS21-like element IS100 family transposase	A0A2L1IVA1	Escherichia_phage	1.9e-201	100.0
WP_001323403.1\|4123198_4123978_+	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	1.5e-139	100.0
WP_001254928.1\|4125168_4126320_-\|transposase	IS30-like element IS30 family transposase	W5R8L2	Staphylococcus_phage	2.2e-41	35.3
WP_000772679.1\|4130532_4131798_-\|integrase	integrase arm-type DNA-binding domain-containing protein	B7SYF8	Stenotrophomonas_phage	4.8e-74	40.5
WP_001352285.1\|4132241_4133261_+	NADPH-dependent aldehyde reductase Ahr	A0A0G2Y405	Acanthamoeba_polyphaga_mimivirus	4.9e-45	30.7
WP_001295681.1\|4135052_4136135_-	LPS export ABC transporter permease LptG	NA	NA	NA	NA
WP_000584107.1\|4136134_4137235_-	LPS export ABC transporter permease LptF	NA	NA	NA	NA
WP_000397144.1\|4137501_4139013_+	leucyl aminopeptidase	Q6GYZ8	Mycoplasma_phage	6.0e-47	38.0
WP_000786399.1\|4139366_4139810_+	DNA polymerase III subunit chi	NA	NA	NA	NA
WP_000416382.1\|4139809_4142665_+\|tRNA	valine--tRNA ligase	A0A1V0SK04	Klosneuvirus	1.3e-140	36.7
4140478:4140494	attR	NA	NA	NA	NA
WP_000079655.1\|4142720_4143917_-	DUF898 domain-containing protein	NA	NA	NA	NA
WP_001059412.1\|4144109_4144613_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_000002953.1\|4144658_4145075_-	ribonuclease E inhibitor RraB	NA	NA	NA	NA
WP_000012907.1\|4145236_4146241_+	ornithine carbamoyltransferase	NA	NA	NA	NA
WP_044067673.1\|4146296_4147595_-	hypothetical protein	NA	NA	NA	NA
WP_001326836.1\|4148790_4149243_-	YhcH/YjgK/YiaL family protein	NA	NA	NA	NA
WP_000256681.1\|4149387_4149981_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_000500689.1\|4150051_4150765_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_000230281.1\|4150895_4151291_+	RidA family protein	NA	NA	NA	NA
WP_001296693.1\|4151571_4151706_+	pyr operon leader peptide	NA	NA	NA	NA
WP_000013046.1\|4151709_4152645_+	aspartate carbamoyltransferase	M1HWF9	Paramecium_bursaria_Chlorella_virus	2.9e-52	40.2
WP_000148581.1\|4152657_4153119_+	aspartate carbamoyltransferase regulatory subunit	NA	NA	NA	NA
WP_000047539.1\|4153191_4153578_+	2-iminobutanoate/2-iminopropanoate deaminase	NA	NA	NA	NA
WP_000471885.1\|4153783_4156480_-	magnesium-translocating P-type ATPase	M1HLC0	Paramecium_bursaria_Chlorella_virus	8.2e-47	27.6
WP_001387276.1\|4156620_4156674_-	mgtA regulatory leader peptide MgtL	NA	NA	NA	NA
WP_001181312.1\|4156858_4157806_+	HTH-type transcriptional regulator TreR	C6ZCU4	Enterobacteria_phage	7.9e-13	21.8
WP_001299664.1\|4157924_4159346_+	PTS trehalose transporter subunit IIBC	NA	NA	NA	NA
WP_001301172.1\|4159395_4161051_+	alpha,alpha-phosphotrehalase	NA	NA	NA	NA
WP_000187791.1\|4161444_4163583_+	anaerobic ribonucleoside-triphosphate reductase	A0A2I7QNQ7	Vibrio_phage	9.1e-267	64.6
WP_001106226.1\|4163740_4164205_+	anaerobic ribonucleoside-triphosphate reductase-activating protein	H6WXC9	Vibrio_phage	2.5e-52	59.7
WP_001232255.1\|4164249_4164636_-	cytochrome b562	NA	NA	NA	NA
WP_001162171.1\|4164818_4166171_-\|protease	metalloprotease PmbA	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP049082

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1262 : 59789

Escherichia_phage(36.84%)

protease,bacteriocin,integrase,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001066954.1\|1262_2003_-\|integrase	tyrosine-type recombinase/integrase	I3WFA4	Macacine_betaherpesvirus	1.2e-24	57.6
WP_001312821.1\|2123_2312_-	hypothetical protein	NA	NA	NA	NA
WP_000175738.1\|2685_3594_-	antimicrobial resistance protein Mig-14	NA	NA	NA	NA
WP_000771475.1\|3656_4766_-	NAD-dependent epimerase/dehydratase family protein	NA	NA	NA	NA
WP_000280980.1\|5198_6152_-\|protease	omptin family outer membrane protease	NA	NA	NA	NA
WP_001332050.1\|6255_6645_+\|protease	outer membrane protease	NA	NA	NA	NA
WP_001312823.1\|7424_7583_-\|transposase	transposase	NA	NA	NA	NA
WP_162842477.1\|7766_8979_+\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	2.7e-167	99.0
WP_001259759.1\|10160_10364_-\|bacteriocin	colicin V family bacteriocin	NA	NA	NA	NA
WP_014640552.1\|10341_10578_-	colicin V immunity protein	NA	NA	NA	NA
WP_001105066.1\|11041_11323_-	hypothetical protein	NA	NA	NA	NA
WP_000203272.1\|11680_12208_-	colicin B immunity protein	NA	NA	NA	NA
WP_001312845.1\|12451_13267_+\|bacteriocin	lipid II-degrading bacteriocin colicin M	NA	NA	NA	NA
WP_000864812.1\|13316_13670_-	colicin M immunity protein	NA	NA	NA	NA
WP_000016493.1\|13847_14639_-\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	2.7e-51	90.2
WP_000796228.1\|14635_15325_-	hypothetical protein	NA	NA	NA	NA
WP_000493379.1\|15368_15719_-	hypothetical protein	NA	NA	NA	NA
WP_000952217.1\|16272_17361_+	transcriptional repressor PifC	NA	NA	NA	NA
WP_000698737.1\|17362_19588_+	phage T7 exclusion protein	NA	NA	NA	NA
WP_000963206.1\|19637_20537_-	nucleotide-binding protein	NA	NA	NA	NA
WP_000111771.1\|20526_20817_-	hypothetical protein	NA	NA	NA	NA
WP_001261287.1\|21112_21343_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_001044768.1\|21339_21756_+	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_000350638.1\|21917_24056_-	AAA family ATPase	NA	NA	NA	NA
WP_000608644.1\|24580_25843_+\|transposase	IS1380-like element ISEc9 family transposase	A0A1B0VDR3	Salmonella_phage	1.3e-39	100.0
WP_015387340.1\|26098_26974_+	class A extended-spectrum beta-lactamase CTX-M-55	A0A1B0VBP7	Salmonella_phage	2.4e-125	82.1
WP_001393253.1\|27020_27353_-	cupin fold metalloprotein, WbuC family	NA	NA	NA	NA
WP_001089727.1\|27530_28610_-	permease	NA	NA	NA	NA
WP_001175594.1\|28714_29038_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_071819239.1\|29198_29681_+	hypothetical protein	A0A2H4J5V6	uncultured_Caudovirales_phage	2.9e-40	68.5
WP_001067855.1\|29571_30276_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000844627.1\|31913_32156_+\|transposase	transposase	NA	NA	NA	NA
WP_000164043.1\|32187_32838_-	tetracycline resistance transcriptional repressor TetR(A)	NA	NA	NA	NA
WP_077248803.1\|32943_34143_+	tetracycline efflux MFS transporter Tet(A)	NA	NA	NA	NA
WP_000058717.1\|34174_35059_-	EamA family transporter	NA	NA	NA	NA
WP_001351729.1\|35196_35589_-	cysteine hydrolase	NA	NA	NA	NA
WP_001067855.1\|37223_37928_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000018329.1\|38467_39283_-	aminoglycoside O-phosphotransferase APH(3')-Ia	A0A193DTG4	Autographa_californica_nuclear_polyhedrosis_virus	6.1e-163	100.0
WP_001067855.1\|39433_40138_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_001067855.1\|40244_40949_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_011264039.1\|41021_41261_+	macrolide transporter	A0A2K5B2B5	Erysipelothrix_phage	9.5e-08	46.2
WP_000612791.1\|41406_42270_+	SDR family oxidoreductase	W8CYX9	Bacillus_phage	2.5e-05	31.0
WP_001354008.1\|42307_42553_+	hypothetical protein	NA	NA	NA	NA
WP_000034420.1\|43021_43813_+	sulfonamide-resistant dihydropteroate synthase Sul3	A0A0B5J4J5	Pandoravirus	1.2e-14	26.5
WP_109023896.1\|43815_44091_-	hypothetical protein	NA	NA	NA	NA
WP_000800531.1\|44992_45325_-	quaternary ammonium compound efflux SMR transporter QacL	NA	NA	NA	NA
WP_001206316.1\|45494_46286_-	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1	NA	NA	NA	NA
WP_001456218.1\|46374_47217_-	alpha/beta fold putative hydrolase EstX	NA	NA	NA	NA
WP_072042932.1\|47417_47651_-	hypothetical protein	NA	NA	NA	NA
WP_015344975.1\|47681_49175_-\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_001255015.1\|49286_49592_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_000214122.1\|49619_50834_-	chloramphenicol/florfenicol efflux MFS transporter FloR	S4TR35	Salmonella_phage	1.2e-18	28.7
WP_001447541.1\|51050_51935_-	DUF3363 domain-containing protein	NA	NA	NA	NA
WP_001067855.1\|52536_53241_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_001067834.1\|55664_56369_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	3.1e-139	99.6
WP_165587319.1\|56314_57471_-\|transposase	IS3 family transposase	A0A2P1JR32	Mycobacterium_phage	1.3e-17	30.6
WP_002063889.1\|57562_58105_-	AAA family ATPase	NA	NA	NA	NA
WP_000557452.1\|58117_58978_-	aminoglycoside N-acetyltransferase AAC(3)-IIa	NA	NA	NA	NA
WP_001067834.1\|59084_59789_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	3.1e-139	99.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP049081

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP049082

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection