CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP047343	Proteus cibarius strain ZF1 plasmid pZF1-qnrD, complete sequence	0 crisprs	NA	0	0	0	0
NZ_CP047342	Proteus cibarius strain ZF1 plasmid pZF1-7kb, complete sequence	0 crisprs	NA	0	0	0	0
NZ_CP047340	Proteus cibarius strain ZF1 chromosome, complete genome	6 crisprs	WYL,csa3,cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f,DinG,DEDDh,RT,cas3	5	24	15	2
NZ_CP047341	Proteus cibarius strain ZF1 plasmid pZF1-cfr, complete sequence	0 crisprs	NA	0	0	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP047340_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047340_1

84508-84600

Orphan

Consensus_repeat	Method
CTTCAAGGTGTAGTGTTGTTGACTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP047340_1

>merge|NZ_CP047340|1|84508-84600|CRISPRCasFinder
CTTCAAGGTGTAGTGTTGTTGACTGTGTGTTCATTCGTACTAGCCATATACTTATGATACTCGTCATACTTCAAGGTGTAGCGTTGTTGACTG

>NZ_CP047340|1|1|84508-84600|CRISPRCasFinder
CTTCAAGGTGTAGTGTTGTTGACTG	TGTGTTCATTCGTACTAGCCATATACTTATGATACTCGTCATA
CTTCAAGGTGTAGCGTTGTTGACTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047340.1\|WP_075672700.1\|85626_86691_+\|patatin-family-protein	unknown	unknown	gnl\|CDD\|227013
NZ_CP047340.1\|WP_110076564.1\|79935_80598_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047340.1\|WP_064721106.1\|89539_90319_+\|deoxyribose-phosphate-aldolase	unknown	unknown	gnl\|CDD\|235387
NZ_CP047340.1\|WP_075672696.1\|91778_93005_+\|phosphopentomutase	unknown	unknown	gnl\|CDD\|235430
NZ_CP047340.1\|WP_075672698.1\|87717_89019_+\|NupC/NupG-family-nucleoside-CNT-transporter	unknown	unknown	gnl\|CDD\|224883
NZ_CP047340.1\|WP_156734040.1\|82782_84372_+\|peptide-chain-release-factor-3	unknown	unknown	gnl\|CDD\|179105
NZ_CP047340.1\|WP_000854920.1\|81878_82526_+\|LexA-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224885
NZ_CP047340.1\|WP_007105462.1\|78085_78517_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047340.1\|WP_036934279.1\|93082_93799_+\|purine-nucleoside-phosphorylase	unknown	unknown	gnl\|CDD\|180275
NZ_CP047340.1\|WP_000451746.1\|81509_81761_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|374243
NZ_CP047340.1\|WP_099660235.1\|86683_87466_+\|metal-dependent-hydrolase	unknown	unknown	gnl\|CDD\|171118
NZ_CP047340.1\|WP_000210563.1\|79104_79404_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368356
NZ_CP047340.1\|WP_040132806.1\|79400_79949_-\|transglycosylase-SLT-domain-containing-protein	unknown	unknown	gnl\|CDD\|381603
NZ_CP047340.1\|WP_075672701.1\|85152_85497_+\|BON-domain-containing-protein	unknown	unknown	gnl\|CDD\|182556
NZ_CP047340.1\|WP_156734042.1\|74483_78053_+\|conjugal-transfer-protein-TraG	unknown	unknown	gnl\|CDD\|369594
NZ_CP047340.1\|WP_075672697.1\|90389_91712_+\|thymidine-phosphorylase	unknown	unknown	gnl\|CDD\|180276
NZ_CP047340.1\|WP_099660232.1\|95025_96762_+\|aspartate-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|223154
NZ_CP047340.1\|WP_075672695.1\|93882_94332_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047340.1\|WP_008843243.1\|80584_81454_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047340.1\|WP_000566755.1\|78574_79108_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237237

Protein	Function_ID	Function_description	E-value
NZ_CP047340.1\|WP_075672700.1\|85626_86691_+\|patatin-family-protein	gnl\|CDD\|227013	COG4667, COG4667, Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only].	3.95333e-108
NZ_CP047340.1\|WP_075672696.1\|91778_93005_+\|phosphopentomutase	gnl\|CDD\|235430	PRK05362, PRK05362, phosphopentomutase; Provisional.	0
NZ_CP047340.1\|WP_075672698.1\|87717_89019_+\|NupC/NupG-family-nucleoside-CNT-transporter	gnl\|CDD\|224883	COG1972, NupC, Nucleoside permease [Nucleotide transport and metabolism].	0
NZ_CP047340.1\|WP_156734040.1\|82782_84372_+\|peptide-chain-release-factor-3	gnl\|CDD\|179105	PRK00741, prfC, peptide chain release factor 3; Provisional.	0
NZ_CP047340.1\|WP_156734042.1\|74483_78053_+\|conjugal-transfer-protein-TraG	gnl\|CDD\|369594	pfam07916, TraG_N, TraG-like protein, N-terminal region. The bacterial sequences found in this family are similar to the N-terminal region of the TraG protein. This is a membrane-spanning protein, with three predicted transmembrane segments and two periplasmic regions. TraG protein is known to be essential for DNA transfer in the process of conjugation, with the N-terminal portion being required for F pilus assembly. The protein is thought to interact with the periplasmic domain of TraN to stabilize mating-cell interactions.	3.27879e-86
NZ_CP047340.1\|WP_036934279.1\|93082_93799_+\|purine-nucleoside-phosphorylase	gnl\|CDD\|180275	PRK05819, deoD, DeoD-type purine-nucleoside phosphorylase.	1.85165e-171
NZ_CP047340.1\|WP_000451746.1\|81509_81761_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|374243	pfam15943, YdaS_antitoxin, Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT. YdaS_antitoxin is a family of putative bacterial antitoxins, neutralising the toxin YdaT, family pfam06254.	1.80645e-27
NZ_CP047340.1\|WP_099660235.1\|86683_87466_+\|metal-dependent-hydrolase	gnl\|CDD\|171118	PRK11449, PRK11449, metal-dependent hydrolase.	1.31751e-108
NZ_CP047340.1\|WP_000210563.1\|79104_79404_-\|hypothetical-protein	gnl\|CDD\|368356	pfam05247, FlhD, Flagellar transcriptional activator (FlhD). This family consists of several bacterial flagellar transcriptional activator (FlhD) proteins. FlhD combines with FlhC to form a regulatory complex in E. coli, this complex has been shown to be a global regulator involved in many cellular processes as well as a flagellar transcriptional activator.	5.57405e-05
NZ_CP047340.1\|WP_040132806.1\|79400_79949_-\|transglycosylase-SLT-domain-containing-protein	gnl\|CDD\|381603	cd13400, LT_IagB-like, Escherichia coli invasion protein IagB and similar proteins. Lytic transglycosylase-like protein, similar to Escherichia coli invasion protein IagB. IagB is encoded within a pathogenicity island in Salmonella enterica and has been shown to degrade polymeric peptidoglycan. IagB-like invasion proteins are implicated in the invasion of eukaryotic host cells by bacteria. Lytic transglycosylase (LT) catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Members of this family resemble the soluble and insoluble membrane-bound LTs in bacteria and the LTs in bacteriophage lambda.	4.65214e-22
NZ_CP047340.1\|WP_075672701.1\|85152_85497_+\|BON-domain-containing-protein	gnl\|CDD\|182556	PRK10568, PRK10568, molecular chaperone OsmY.	2.62953e-16
NZ_CP047340.1\|WP_000854920.1\|81878_82526_+\|LexA-family-transcriptional-regulator	gnl\|CDD\|224885	COG1974, LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) [Transcription / Signal transduction mechanisms].	2.65636e-35
NZ_CP047340.1\|WP_075672697.1\|90389_91712_+\|thymidine-phosphorylase	gnl\|CDD\|180276	PRK05820, deoA, thymidine phosphorylase; Reviewed.	0
NZ_CP047340.1\|WP_099660232.1\|95025_96762_+\|aspartate-aminotransferase-family-protein	gnl\|CDD\|223154	COG0076, GadB, Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism].	1.34193e-68
NZ_CP047340.1\|WP_064721106.1\|89539_90319_+\|deoxyribose-phosphate-aldolase	gnl\|CDD\|235387	PRK05283, PRK05283, deoxyribose-phosphate aldolase; Provisional.	0
NZ_CP047340.1\|WP_000566755.1\|78574_79108_-\|hypothetical-protein	gnl\|CDD\|237237	PRK12860, PRK12860, flagellar transcriptional regulator FlhC.	3.2537e-08

>NZ_CP047340.1|WP_156734040.1|82782_84372_+|peptide-chain-release-factor-3
MANQDFLNEINKRRTFAIISHPDAGKTTITEKVLLFGQAIQRAGTVKGRGSNQHAKSDWMEMEKQRGISITTSVMQFPYADCLVNLLDTPGHEDFSEDTYRTLTAVDCCLMVIDSSKGVEDRTRKLMEVTRLRDTPILTFMNKLDRDIRDPMELMDEVETELKIACSPVTWPIGCGKLFKGVYHILKDETYLYQTGQGHTIQDSRVIKGLDNPELDEAIGDDLASQLRDELELVLGASHEFDHEAFLAGELTPVFFGTALGNFGVNHMLDGLVKWAPAPMPRQTDMREVTASEETFTGFVFKIQANMDPKHRDRVAFLRVVSGMYDKGMKLHQVRIKKDVVISDALTFMAGDRSHVEHAYPGDIIGLHNHGTIQIGDTFTQGEILKFTGIPNFAPELFRRIRLRDPLKQKQLLKGLVQLSEEGAVQVFRPLANNDLIVGAVGVLQFDVVVARLKSEYNVEAIYESVNVSTARWVECDNEKKLEEFKRKNEQNLALDGGDNLTYIAPTMVNLNLTRERYPDVEFHQTREH
>NZ_CP047340.1|WP_000854920.1|81878_82526_+|LexA-family-transcriptional-regulator
MKTLSERLNHALQLTGVTQSELARRIGIKQQSISQICSGKSARSRYTMQIAEALRVNAHWLATGDGEIGLGVGNVEVGPDIKGRIPLINWVQAGDWTEIAEGFAHEDAEEWREVTGKAHEGCFALRVKGDSMENPSGKKSIPEGAVIVVDPELPYSSGSLVVARLDDSKEATFKQLVIDGEQKYLKPLNPQYPAIPINGNCTIIGVVRQAIIDFW
>NZ_CP047340.1|WP_000451746.1|81509_81761_-|helix-turn-helix-domain-containing-protein
MEVFNTTQKHLRRAIDLVGGQSALARAINSKQQNVWFWLNKSGRVPAEFVLPIEQATQGQVTRSQLRPDIYPECPSELKASNQ
>NZ_CP047340.1|WP_008843243.1|80584_81454_-|hypothetical-protein
MRDYGKVYTRFWLKQNVLSWSDSAKLLGLYLLTCPHCNLLGCFRLPIGYVASDLNWDEQQVAKTLSELEQDQFLIRCEASGWTLIRSFLKHNPIENPNQGKAAFRLLKDVPADFIGMASLLKSLAAFQARLPEEFSSLFMPDGNPVRDSQRSDDSERSNKPTVKTVDHIQFEDFWDVQIRKEKKAKAKEEWLRMGLNEDHELALEVLTRWKEQRDNRLQYQDRTKTPMPHNWLLNRQWEDEYVRIDEVQQSSTSLKGSNHQLNIEESNRRIAESWAGPGIREVRSSAGG
>NZ_CP047340.1|WP_110076564.1|79935_80598_-|hypothetical-protein
MQEVDKRVFAEVWGAAWAMYGKSVSPQLLSIAFEALRAYSIEEVRIGLTRHIQSPDTGQFFPKPADVIKHIDGNSGSRAMVAWNKVDKAVRQVGAWTSVMFDDALIHRVISDMGGWVELCKVDDREYPFKQKEFLTRYQAYLLRDEVGEYPRLLQGIADHQNQQKGFDMQAPVAVGDWSKAAQVYTRGIADFSAVPLKRISPKAIQALLGNQLEDKNEND
>NZ_CP047340.1|WP_040132806.1|79400_79949_-|transglycosylase-SLT-domain-containing-protein
MKTIKAKTIALVIAMSASTSVYAFPGYQWEKAAQSVGIDPVMLYAVALAESASHRGLNMTSPWPYAIRNGSNATYAKSKTEAEQLLNQALQETEKYQLDIGLMQINLHWHGHRVSSAAELLDPITNLTVGSSILAEAIKSSPNDLELGIGRYHSWNEDRARWYGQRVLSIYRNILHELEVRQ
>NZ_CP047340.1|WP_000210563.1|79104_79404_-|hypothetical-protein
MTTNQQDFYQLNLAYLHAARELARIDPQEAVLRFGLTRDVVDALINAGVDDLQRVATSSFMLFQPRGNQSQLIEMVKSKGTGIPRIAYLLSTLNNKGDA
>NZ_CP047340.1|WP_000566755.1|78574_79108_-|hypothetical-protein
MIDNLSKSELFTRASLLIKYGFRTTIIALDTGLPIHIIRRLHKEVTGKSPCPGQLPESDAIVKSRRALVEGSLLMALYVNIGGDNVYKQLNIDALMKAYDAYLVARKEADLPAEIPWKKLTINEGWVLARDLRSQLASLHRCRCGSLYLTVSQQRIQLKCPVCEIMAEQTTRALFEN
>NZ_CP047340.1|WP_007105462.1|78085_78517_-|hypothetical-protein
MTNLLKSLPARCWFISLGLFLATLAAAHFFPSEILTAFAKLAALPFLICTIVFFSYLGFKATCNPIGLIAIITLLVAIAYWQASWTIVGLGLFFLAICTGIRFLSSQVKDSGRTLSIEEKWYWYKLHSFFDGFYPRYPKKPKK
>NZ_CP047340.1|WP_156734042.1|74483_78053_+|conjugal-transfer-protein-TraG
MWEIYSIGDSAFLEQVLNAVAMITGTGDFTSMVRIGLLIGVLMVSVQALMQGGRGINFQHVLVSWLVFATMFGPSTRVSIEDAYTGQVRVVDNVPIGVAAAGSTISTVGFQITRLFETAFSTPAMTEYGFASSLQSLIKVRKQVMDRSGLGDANRVAGSDIEQSWFNYIKECTLIGIDIGQKNLDQVLSDPNPMTAIRFDSRIYGTRIMLSGSSSDLDCTDAYSQLKLMTESTFIPRLKQVLSASLGTSSATDTDDVIRNALNNLGLASVNTQEYMTASVLLPIYEQSVTGKYMDDQAFTAAVMVNQAIEQRNTQWAAEQTLFQSIVRPMMTFFEGFIYAITPLMAFVIALGQIGMRMAGKYLLILLWIQLWMPVMAIINLYIHLTVAGKMSALDAFAGTEVPSFAGMMQMDSVLQTWIATGGMLASSVPAISLMLVYGSAITATHLAGRLQNGDAIDEKMASPDVAKNAPVIQSQSMFQNSALTGSAMTGASNLLSSFSVGSAVGSMIGSAKESMTQATQAFSRQVGNTMSRTFGEKLSYDNLSSVGRQIGSSNSASSAVVNQVTDDLQTRYGFGDDKKDAVRGLVSGVLSGGLRVGGDGTITNPGEKEVADKGFLGRLLGTGGNDSPQGNLPGVDKPDSSRVPKLSRVRAGLDLGGNFSGQVESSEGSSRSTTANTLTGEMQSLASSDSRRAEFRDAMVKDLSDSRRSGVEMSLSNQDYQSLQSSAQDVITASNRFSELDQASYSLSGQRNTDGATLTRLAADNPEVMDYLGRYMNQHVEAGNRLRENLPMYQRLLPDDNQAYVAAAMESLTYSNSSTPAERDNDYQAAMTVMAMATGADLRSIQPRSNEGLSSTAPTFGGTQSQVESGVLGGYEDAATVQTQFNSAQSAYQANLSSVDGQLNAHQQQAQQAVASDTSTYQSGLNSEAGSQWRSRIMADDSGVSGAEMFFNSASAIGDFSGKHTDAALHTLNHFGEDYESYKEQALAEPGSRGFLHNAAVASKSTWDGLKAAVDAGTSLENPLTAFNDAYSGSSSQYASEVNWGTKSEAMLAGAFGAAVNNRYGEFLEQYADDFKQEAYSEGQRMGLTPIQSQVFAQAFNEGLAGRVFNSEDSSSWSPEMLGLREQMLNEYRQKDESGAYIPDSVSEEDKAFVDKQIAVISNASLAGDYAQNNLIDIRAYNQASGRN
>NZ_CP047340.1|WP_075672701.1|85152_85497_+|BON-domain-containing-protein
MEQYKTLKLALVMSIGLAFVSMGASAETSWYSEINNSGNNTGHYLSDTSISNKIKDTLLPMQDIDSENISIRTEFGHVFLSGFVDSKAQEEKILQIIEKIEGVKSVDSDVNIKS
>NZ_CP047340.1|WP_075672700.1|85626_86691_+|patatin-family-protein
MGKYIPVTLNNITALEFQSSLPQGKVALVCEGGGQRGIFTAGVLDEFMRSQFDPFDILLGVSAGAQNLSAFACGQRGYARKIINRYTTNNQFFNPLRFVRGGNLLDLDWYIETTAKEMPLDMPTALRRFDTGREFYMVASRSDNFQANYFQPDEPTWLEIIKASSAIPAFYRNGVLFHDVVYHDGGISDAIPVREAYRRGCRTIVVVRTVPSEYQYTTEWVERMGKWFENSRLQRFMEMAQVHIETYTETIKFIQSPPEDVVVIEIYPPTTLQSSALGSRLSALNHDYHVGRRCGRYFLATIGQHFSKKKFKQHDKKVFSLFEQEAKADKAENASIIQQGTRSVHPDVRQIQNE
>NZ_CP047340.1|WP_099660235.1|86683_87466_+|metal-dependent-hydrolase
MNKFIDTHCHFDFPVFYDDIANSLSLARQAHVEKIIIPAVARWNLDVVAELANHHHQLYCALGLHPLYINEHTEQHLLELEQKLKTTSRCVAIGEIGLDDYMENPQPEKQEAFLIAQLKLAIKFDLPVILHSRKTHDKLSALLRRYDVPRKGVIHGFAGSLQQAEKFIQQGYFIGVGGTITYERAQKTRRAIASLPLEYLLLETDAPDMPVSGFQGKPNRPERIQNVFSQLCELRQGSPEAIAEQLYLNSLQLFGLNNIT
>NZ_CP047340.1|WP_075672698.1|87717_89019_+|NupC/NupG-family-nucleoside-CNT-transporter
MQLIMSLVGMATLILIAILFSSNRRAIRLRTVGGAFLIQIGLGAFVLYSDGGRKVLMAISDGVKNVIDYGENGMSFLFAGLVSDKMFELFGGGGFVFALRVLPVIVFFSSLIAVLYYLGIMQIVIKILGGGLQKVLGTSRTESMSATANIFVGQTEAPLVVRPYIARMTTSELFAVMCGGLASVAGSVLAGYASMGVPLEYLITASFMAAPGGLLFAKLLIPETETPDDQKDALDKMADDEKPANIIDAAAAGASSGLQLALNVGAMLLAFVALIALVNGILGGIGGWFGYENFSLELVLGWIFAPIAFLIGVPWSEATIAGSFIGQKIVINEFYAYSEFSKYLQEDALVAGSGLMVLSEQTKIIISFALCGFANLSSVAVLLGGLGGMAPNRRKDVARLGMKAVLAGTLSNLMSATIAGFFFALTAMAVVAA
>NZ_CP047340.1|WP_064721106.1|89539_90319_+|deoxyribose-phosphate-aldolase
MTDLTAAARLALSLMDLTTLNDDDTDAKVTALCHQAKSPEGNTAAICIYPRFIPLARKVLREQGTPDVRIATVTNFPHGNDDLDIALAETNAALAYGADEVDVVFPYRAFMAGNEQIGFDIVKACKEACAEAGSLLKVIIETGELKDPALIRKASEISIKAGADFIKTSTGKVPVNATLESAELMIQVIHDMGVGKEVGFKPAGGVRTAEEAAQYLALANRIMGDNWVDARHFRFGASSLLGNLLATLGHGEQKSSSGY
>NZ_CP047340.1|WP_075672697.1|90389_91712_+|thymidine-phosphorylase
MFLAQEIIRKKRDGHPLTEEEIRFFINGVRDNTVSEGQIAALAMTIYFHDMTMPERVALTLAMRDSGTVLNWKSLNLNGPIVDKHSTGGVGDVTSLMLGPMVAACGGYVPMISGRGLGHTGGTLDKLEAIPGFDIFPDDEKFRDIIRNVGVAIIGQTNSLAPADKRFYATRDITATVDSIPLITASILGKKLAEGLDALVMDVKVGSGAFMPTYQKSEELAESIVQVANGAGCQTTALLTDMNEVLASSAGNAVEVREAVQFLTGEYRNPRLFEVTMALCVEMLVSGRLADDRQQARQKLQDVLDNGKAAEVFGRMVAAQKGPSDFVENYNKYLPTAVLSKPVFAEKAGFITEMDTRALGMSVVTLGGGRRKATDTIDYSVGLSDIVALGAEINTDTPLAMIHANSEKSWQEAAAEVRKAMVIGDSKREASPMVYRQISE
>NZ_CP047340.1|WP_075672696.1|91778_93005_+|phosphopentomutase
MKRVHIMVLDSFGIGAAGDAEKFGDQGSDTLGHIAQAFADGKADREGRKGPLHLPNLCRLGLGKAAEESTGKFPIGLDKDADIIGAYGYASEISSGKDTPSGHWEIAGVPVLFDWGYFKDLKNSFPQELLENIVKRAKLPGYLGNCHASGTVILDELGEEHMKTGKPIFYTSADSVFQIACHEETYGLDELYELCEIARDELNKGDYNIGRVIARPFIGDKPGNFARTGNRHDLAVEPPAPTMLKKLVDEKQGHVVSIGKIADIYANVGITKKVKATGINALFDATLEEMKLAGDNTIVFTNFVDFDSSYGHRRDAVGYGEALELFDRRLPELMELVKEDDILILTADHGCDPTWPGSDHTREHIPVLVYGPKVKPGSLGHRETFADIGQTVVKYFGLSPVDYGKAMF
>NZ_CP047340.1|WP_036934279.1|93082_93799_+|purine-nucleoside-phosphorylase
MATPHINAEMGDFADVVLMPGDPLRAKYIAETFLQDVRQVNNVRGMLGFTGTYKGRKVSVMGHGMGIPSCSIYAKELITDFGVKVIIRVGSCGAVLPDVELRDVVIGMGACTDSKVNRLRFKDQDFAAIADYQLVQNAVDAAKAKDIKVRVGNIFSADLFYSPDPEMFDVMEKYGILGVEMEAAGIYGVAAEYGAKALTICTVSDHIKKGTQTTAEERQTTFNEMIEIALESVLLLED
>NZ_CP047340.1|WP_075672695.1|93882_94332_-|hypothetical-protein
MKAHIAVAAVFVLLSASVHAEEFTCQLENGKYVSVFVEHGKPPVYRYGTLAKTEITLPVPQQPNNNVFYGHQMFVAGASTYVRFKNGNYSYVVYDGEGRGWNFNGIIVYKDNNIISKKECKEPLSPSLDNIKNYAIKMDPYLETYIYAP
>NZ_CP047340.1|WP_099660232.1|95025_96762_+|aspartate-aminotransferase-family-protein
MKNQDLLGLSSANILNVEFEKKYHDVIAHFFSRDPKYWPIFQDKTIQSITQFRKTTTNDNDQLQRYSNGQQLFDRLMADTQIQQNINYPENDPNELLMLVSTLCKNWENPLAVENVIAMPSDPGVYGSILGLMGNPNMVYCEYSGVADALEKVTIKKVAKLVGYDPEVASGVFTQGGTMCNLYGYLFGLRKSMPNSKHLGMAADQDYRIINSQGGHYSNMTNLALLGVDVDNKTIRIKVSEDNTINLEHLERELRACFTVKCKVPTIMLTTGTTDTFGVDDVKGVCELRDRLCEEFEIPVKPHVHVDAAVGWPIIFFLEYDFSSNPLAINDVTLEGLRQNVEKFKHLKYADSITIDFHKWGYVPYTSSLVLVKNGNDFVALENDPENFTYFEHELEGQTHLQSTIECTRSGVGIFGAYSAMHYMGIEGYQTIIAHCLQNANYMRHQLLEMGNAKVIVPQNQGPSVGFKLYDPNLVKDPNVAFDLELTCSTDKEAYDFMVHNTQWHRKLFLQRGREGLFTNWVDSIACSKYAKNNRYVYLPGEKAVFMNPNTERAHIDNFMKILTEMSQNLSSKKAAKI

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Crispr_ID: NZ_CP047340_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047340_2

710061-711468

TypeI-F

I-F

Consensus_repeat	Method
GTTCACTGCCACATAGGCAGCTTAGAAA	PILER-CR
GTTCACTGCCACATAGGCAGCTTAGAAA	CRISPRCasFinder
GTTCACTGCCACATAGGCAGCTTAGAAA	CRT

23 spacers

cas1,cas3-cas2,cas8f,cas5f,cas7f,cas6f

The CRISPR arrays of NZ_CP047340_2

>merge|NZ_CP047340|2|710061-711468|PILER-CR,CRISPRCasFinder,CRT
GTTCACTGCCACATAGGCAGCTTAGAAATTGCTGATTGATAACGCCTAAATGTTCGAGGTGTTCACTGCCACATAGGCAGCTTAGAAAATCATCTGATAACTGTTGCTTACCTAATGTAGGTTCACTGCCACATAGGCAGCTTAGAAAAAGAAGGTTTAGCACCATCAGTTGATGAGAAAGTTCACTGCCACATAGGCAGCTTAGAAAGTAACTTGGAGCAACGAACCAATAAACGCCCCGTTCACTGCCACATAGGCAGCTTAGAAAACTAACAGCCTAATGTCGGGCTTCTCATTAAAGTTCACTGCCACATAGGCAGCTTAGAAAGTGTATATCAGCTCTATATTCATCACCAGCATGTTCACTGCCACATAGGCAGCTTAGAAAATGAGGCCTGTGACTCTGGCACACCGTAAACCGTTCACTGCCACATAGGCAGCTTAGAAATACAAACAAAATTTAAGAACGTATGCGGAATGGTTCACTGCCACATAGGCAGCTTAGAAATAACTCTGAAATATGGGTGAGCTTTAACCCGAGTTCACTGCCACATAGGCAGCTTAGAAATCTACCTTCGTTTAGGTCAGTATTTGATATTAGTTCACTGCCACATAGGCAGCTTAGAAATAATACCGCACGCCTCCATTCATTCAGTGATGGTTCACTGCCACATAGGCAGCTTAGAAAATCAGCATCACGTAAAAAACGGGTTGCGACTTGTTCACTGCCACATAGGCAGCTTAGAAAGTATTCAGGCTCAACGGTGCGCCACTCAACAAGTTCACTGCCACATAGGCAGCTTAGAAATTTTTAAGTGGGGCAGAGAATAAAGGCATTGAGTTCACTGCCACATAGGCAGCTTAGAAAATCAAAAAAGTTAGTGGTGATATCTACGAATAGTTCACTGCCACATAGGCAGCTTAGAAATGTTGTATAAAGTATCTCGCTACCGATATATCGTTCACTGCCACATAGGCAGCTTAGAAATTTATCCTGCATAATTACAGGAATGTTAGAGTGTTCACTGCCACATAGGCAGCTTAGAAATATGAGGGACACTTAGCGGAAGCTGATGAATAGTTCACTGCCACATAGGCAGCTTAGAAATGTACGAATGTTCCAGCCTGTGGTTTTCCTTAGTTCACTGCCACATAGGCAGCTTAGAAACGTTAGCTTGGTAGCTTCTTGATGCAGAGATGGTTCACTGCCACATAGGCAGCTTAGAAAAAAGAACAGGCACATCGATTGCAGCGAATACGGTTCACTGCCACATAGGCAGCTTAGAAAAGATGGATATTGCTTTTCCTCCTCACGAGTAAGTTCACTGCCACATAGGCAGCTTAGAAATATTGCAGTGAACACAGCCAGCATGAATATTGGTTCACTACCACATAGGTAGTTTAGAGA

>NZ_CP047340|2|1|710061-711408|PILER-CR
GTTCACTGCCACATAGGCAGCTTAGAAA	TTGCTGATTGATAACGCCTAAATGTTCGAGGT
GTTCACTGCCACATAGGCAGCTTAGAAA	ATCATCTGATAACTGTTGCTTACCTAATGTAG
GTTCACTGCCACATAGGCAGCTTAGAAA	AAGAAGGTTTAGCACCATCAGTTGATGAGAAA
GTTCACTGCCACATAGGCAGCTTAGAAA	GTAACTTGGAGCAACGAACCAATAAACGCCCC
GTTCACTGCCACATAGGCAGCTTAGAAA	ACTAACAGCCTAATGTCGGGCTTCTCATTAAA
GTTCACTGCCACATAGGCAGCTTAGAAA	GTGTATATCAGCTCTATATTCATCACCAGCAT
GTTCACTGCCACATAGGCAGCTTAGAAA	ATGAGGCCTGTGACTCTGGCACACCGTAAACC
GTTCACTGCCACATAGGCAGCTTAGAAA	TACAAACAAAATTTAAGAACGTATGCGGAATG
GTTCACTGCCACATAGGCAGCTTAGAAA	TAACTCTGAAATATGGGTGAGCTTTAACCCGA
GTTCACTGCCACATAGGCAGCTTAGAAA	TCTACCTTCGTTTAGGTCAGTATTTGATATTA
GTTCACTGCCACATAGGCAGCTTAGAAA	TAATACCGCACGCCTCCATTCATTCAGTGATG
GTTCACTGCCACATAGGCAGCTTAGAAA	ATCAGCATCACGTAAAAAACGGGTTGCGACTT
GTTCACTGCCACATAGGCAGCTTAGAAA	GTATTCAGGCTCAACGGTGCGCCACTCAACAA
GTTCACTGCCACATAGGCAGCTTAGAAA	TTTTTAAGTGGGGCAGAGAATAAAGGCATTGA
GTTCACTGCCACATAGGCAGCTTAGAAA	ATCAAAAAAGTTAGTGGTGATATCTACGAATA
GTTCACTGCCACATAGGCAGCTTAGAAA	TGTTGTATAAAGTATCTCGCTACCGATATATC
GTTCACTGCCACATAGGCAGCTTAGAAA	TTTATCCTGCATAATTACAGGAATGTTAGAGT
GTTCACTGCCACATAGGCAGCTTAGAAA	TATGAGGGACACTTAGCGGAAGCTGATGAATA
GTTCACTGCCACATAGGCAGCTTAGAAA	TGTACGAATGTTCCAGCCTGTGGTTTTCCTTA
GTTCACTGCCACATAGGCAGCTTAGAAA	CGTTAGCTTGGTAGCTTCTTGATGCAGAGATG
GTTCACTGCCACATAGGCAGCTTAGAAA	AAAGAACAGGCACATCGATTGCAGCGAATACG
GTTCACTGCCACATAGGCAGCTTAGAAA	AGATGGATATTGCTTTTCCTCCTCACGAGTAA
GTTCACTGCCACATAGGCAGCTTAGAAA

>NZ_CP047340|2|2|710061-711468|CRISPRCasFinder
GTTCACTGCCACATAGGCAGCTTAGAAA	TTGCTGATTGATAACGCCTAAATGTTCGAGGT
GTTCACTGCCACATAGGCAGCTTAGAAA	ATCATCTGATAACTGTTGCTTACCTAATGTAG
GTTCACTGCCACATAGGCAGCTTAGAAA	AAGAAGGTTTAGCACCATCAGTTGATGAGAAA
GTTCACTGCCACATAGGCAGCTTAGAAA	GTAACTTGGAGCAACGAACCAATAAACGCCCC
GTTCACTGCCACATAGGCAGCTTAGAAA	ACTAACAGCCTAATGTCGGGCTTCTCATTAAA
GTTCACTGCCACATAGGCAGCTTAGAAA	GTGTATATCAGCTCTATATTCATCACCAGCAT
GTTCACTGCCACATAGGCAGCTTAGAAA	ATGAGGCCTGTGACTCTGGCACACCGTAAACC
GTTCACTGCCACATAGGCAGCTTAGAAA	TACAAACAAAATTTAAGAACGTATGCGGAATG
GTTCACTGCCACATAGGCAGCTTAGAAA	TAACTCTGAAATATGGGTGAGCTTTAACCCGA
GTTCACTGCCACATAGGCAGCTTAGAAA	TCTACCTTCGTTTAGGTCAGTATTTGATATTA
GTTCACTGCCACATAGGCAGCTTAGAAA	TAATACCGCACGCCTCCATTCATTCAGTGATG
GTTCACTGCCACATAGGCAGCTTAGAAA	ATCAGCATCACGTAAAAAACGGGTTGCGACTT
GTTCACTGCCACATAGGCAGCTTAGAAA	GTATTCAGGCTCAACGGTGCGCCACTCAACAA
GTTCACTGCCACATAGGCAGCTTAGAAA	TTTTTAAGTGGGGCAGAGAATAAAGGCATTGA
GTTCACTGCCACATAGGCAGCTTAGAAA	ATCAAAAAAGTTAGTGGTGATATCTACGAATA
GTTCACTGCCACATAGGCAGCTTAGAAA	TGTTGTATAAAGTATCTCGCTACCGATATATC
GTTCACTGCCACATAGGCAGCTTAGAAA	TTTATCCTGCATAATTACAGGAATGTTAGAGT
GTTCACTGCCACATAGGCAGCTTAGAAA	TATGAGGGACACTTAGCGGAAGCTGATGAATA
GTTCACTGCCACATAGGCAGCTTAGAAA	TGTACGAATGTTCCAGCCTGTGGTTTTCCTTA
GTTCACTGCCACATAGGCAGCTTAGAAA	CGTTAGCTTGGTAGCTTCTTGATGCAGAGATG
GTTCACTGCCACATAGGCAGCTTAGAAA	AAAGAACAGGCACATCGATTGCAGCGAATACG
GTTCACTGCCACATAGGCAGCTTAGAAA	AGATGGATATTGCTTTTCCTCCTCACGAGTAA
GTTCACTGCCACATAGGCAGCTTAGAAA	TATTGCAGTGAACACAGCCAGCATGAATATTG
GTTCACTACCACATAGGTAGTTTAGAGA

>NZ_CP047340|2|1|710061-711468|CRT
GTTCACTGCCACATAGGCAGCTTAGAAA	TTGCTGATTGATAACGCCTAAATGTTCGAGGT
GTTCACTGCCACATAGGCAGCTTAGAAA	ATCATCTGATAACTGTTGCTTACCTAATGTAG
GTTCACTGCCACATAGGCAGCTTAGAAA	AAGAAGGTTTAGCACCATCAGTTGATGAGAAA
GTTCACTGCCACATAGGCAGCTTAGAAA	GTAACTTGGAGCAACGAACCAATAAACGCCCC
GTTCACTGCCACATAGGCAGCTTAGAAA	ACTAACAGCCTAATGTCGGGCTTCTCATTAAA
GTTCACTGCCACATAGGCAGCTTAGAAA	GTGTATATCAGCTCTATATTCATCACCAGCAT
GTTCACTGCCACATAGGCAGCTTAGAAA	ATGAGGCCTGTGACTCTGGCACACCGTAAACC
GTTCACTGCCACATAGGCAGCTTAGAAA	TACAAACAAAATTTAAGAACGTATGCGGAATG
GTTCACTGCCACATAGGCAGCTTAGAAA	TAACTCTGAAATATGGGTGAGCTTTAACCCGA
GTTCACTGCCACATAGGCAGCTTAGAAA	TCTACCTTCGTTTAGGTCAGTATTTGATATTA
GTTCACTGCCACATAGGCAGCTTAGAAA	TAATACCGCACGCCTCCATTCATTCAGTGATG
GTTCACTGCCACATAGGCAGCTTAGAAA	ATCAGCATCACGTAAAAAACGGGTTGCGACTT
GTTCACTGCCACATAGGCAGCTTAGAAA	GTATTCAGGCTCAACGGTGCGCCACTCAACAA
GTTCACTGCCACATAGGCAGCTTAGAAA	TTTTTAAGTGGGGCAGAGAATAAAGGCATTGA
GTTCACTGCCACATAGGCAGCTTAGAAA	ATCAAAAAAGTTAGTGGTGATATCTACGAATA
GTTCACTGCCACATAGGCAGCTTAGAAA	TGTTGTATAAAGTATCTCGCTACCGATATATC
GTTCACTGCCACATAGGCAGCTTAGAAA	TTTATCCTGCATAATTACAGGAATGTTAGAGT
GTTCACTGCCACATAGGCAGCTTAGAAA	TATGAGGGACACTTAGCGGAAGCTGATGAATA
GTTCACTGCCACATAGGCAGCTTAGAAA	TGTACGAATGTTCCAGCCTGTGGTTTTCCTTA
GTTCACTGCCACATAGGCAGCTTAGAAA	CGTTAGCTTGGTAGCTTCTTGATGCAGAGATG
GTTCACTGCCACATAGGCAGCTTAGAAA	AAAGAACAGGCACATCGATTGCAGCGAATACG
GTTCACTGCCACATAGGCAGCTTAGAAA	AGATGGATATTGCTTTTCCTCCTCACGAGTAA
GTTCACTGCCACATAGGCAGCTTAGAAA	TATTGCAGTGAACACAGCCAGCATGAATATTG
GTTCACTACCACATAGGTAGTTTAGAGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047340.1\|WP_156733774.1\|717382_718375_+\|type-I-F-CRISPR-associated-protein-Csy2	cas5f	pfam09614_cas5f_CAS-I-F	gnl\|CDD\|378221
NZ_CP047340.1\|WP_156733778.1\|712643_716027_+\|type-I-F-CRISPR-associated-helicase-Cas3	cas3-cas2	cas3-cas2-CAS-I-F	gnl\|CDD\|274201
NZ_CP047340.1\|WP_156733770.1\|719386_720031_+\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	cas6f	pfam09618_cas6f_CAS-I-F	gnl\|CDD\|187870
NZ_CP047340.1\|WP_156733766.1\|721580_721934_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047340.1\|WP_075670936.1\|702617_704144_-\|L-lactate-permease	unknown	unknown	gnl\|CDD\|224535
NZ_CP047340.1\|WP_099659342.1\|697518_697902_-\|YkgJ-family-cysteine-cluster-protein	unknown	unknown	gnl\|CDD\|223799
NZ_CP047340.1\|WP_099659343.1\|701778_702498_-\|(Fe-S)-binding-protein	unknown	unknown	gnl\|CDD\|223325
NZ_CP047340.1\|WP_156733781.1\|708130_708709_+\|histidine-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|132718
NZ_CP047340.1\|WP_075670932.1\|700344_701766_-\|iron-sulfur-cluster-binding-protein	unknown	unknown	gnl\|CDD\|129374
NZ_CP047340.1\|WP_075670930.1\|699638_700343_-\|lactate-utilization-protein-C	unknown	unknown	gnl\|CDD\|224473
NZ_CP047340.1\|WP_156733780.1\|711672_712647_+\|type-I-F-CRISPR-associated-endonuclease-Cas1	cas1	cd09718_cas1_CAS-I-F	gnl\|CDD\|132676
NZ_CP047340.1\|WP_075670926.1\|698309_698654_-\|DMT-family-protein	unknown	unknown	gnl\|CDD\|377316
NZ_CP047340.1\|WP_156733772.1\|718393_719377_+\|type-I-F-CRISPR-associated-protein-Csy3	cas7f	pfam09615_cas7f_CAS-I-F	gnl\|CDD\|378222
NZ_CP047340.1\|WP_099659346.1\|708799_709687_+\|PhzF-family-phenazine-biosynthesis-protein	unknown	unknown	gnl\|CDD\|223461
NZ_CP047340.1\|WP_156733783.1\|706072_707623_-\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|185001
NZ_CP047340.1\|WP_006533588.1\|723176_723611_+\|type-II-toxin-antitoxin-system-RatA-family-toxin	unknown	unknown	gnl\|CDD\|182678
NZ_CP047340.1\|WP_156733768.1\|721302_721512_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047340.1\|WP_156733776.1\|716036_717386_+\|type-I-F-CRISPR-associated-protein-Csy1	cas8f	cd09735_cas8f_CAS-I-F	gnl\|CDD\|187866
NZ_CP047340.1\|WP_075673655.1\|722537_723020_-\|SsrA-binding-protein-SmpB	unknown	unknown	gnl\|CDD\|235455
NZ_CP047340.1\|WP_075670928.1\|699110_699515_+\|DUF1311-domain-containing-protein	unknown	unknown	gnl\|CDD\|377758

Protein	Function_ID	Function_description	E-value
NZ_CP047340.1\|WP_156733774.1\|717382_718375_+\|type-I-F-CRISPR-associated-protein-Csy2	gnl\|CDD\|378221	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2464 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy2, for CRISPR/Cas Subtype Ypest protein 2.	3.14092e-120
NZ_CP047340.1\|WP_156733778.1\|712643_716027_+\|type-I-F-CRISPR-associated-helicase-Cas3	gnl\|CDD\|274201	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST. The helicase in many CRISPR-associated (cas) gene clusters is designated Cas3, and most Cas3 proteins are described by model TIGR01587. Members of this family are considerably larger, show a number of motifs in common with TIGR01587 sequences, and replace Cas3 in some CRISPR/cas loci in a number of Proteobacteria, including Yersinia pestis, Chromobacterium violaceum, Erwinia carotovora subsp. atroseptica SCRI1043, Photorhabdus luminescens subsp. laumondii TTO1, Legionella pneumophila, etc.	0
NZ_CP047340.1\|WP_156733770.1\|719386_720031_+\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	gnl\|CDD\|187870	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6f is an endoribonuclease that generates crRNA; This family is specific for CRISPR/Cas system I-F subtype; Possesses RRM fold; also known as Csy4 family.	5.70031e-52
NZ_CP047340.1\|WP_075670936.1\|702617_704144_-\|L-lactate-permease	gnl\|CDD\|224535	COG1620, LldP, L-lactate permease [Energy production and conversion].	9.46171e-113
NZ_CP047340.1\|WP_099659342.1\|697518_697902_-\|YkgJ-family-cysteine-cluster-protein	gnl\|CDD\|223799	COG0727, COG0727, Predicted Fe-S-cluster oxidoreductase [General function prediction only].	7.83013e-18
NZ_CP047340.1\|WP_099659343.1\|701778_702498_-\|(Fe-S)-binding-protein	gnl\|CDD\|223325	COG0247, GlpC, Fe-S oxidoreductase [Energy production and conversion].	4.15859e-50
NZ_CP047340.1\|WP_156733781.1\|708130_708709_+\|histidine-phosphatase-family-protein	gnl\|CDD\|132718	cd07067, HP_PGM_like, Histidine phosphatase domain found in phosphoglycerate mutases and related proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction. Subgroup of the catalytic domain of a functionally diverse set of proteins, most of which are phosphatases. The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. This subgroup contains cofactor-dependent and cofactor-independent phosphoglycerate mutases (dPGM, and BPGM respectively), fructose-2,6-bisphosphatase (F26BP)ase, Sts-1, SixA, and related proteins. Functions include roles in metabolism, signaling, or regulation, for example, F26BPase affects glycolysis and gluconeogenesis through controlling the concentration of F26BP; BPGM controls the concentration of 2,3-BPG (the main allosteric effector of hemoglobin in human blood cells); human Sts-1 is a T-cell regulator; Escherichia coli Six A participates in the ArcB-dependent His-to-Asp phosphorelay signaling system. Deficiency and mutation in many of the human members result in disease, for example erythrocyte BPGM deficiency is a disease associated with a decrease in the concentration of 2,3-BPG.	1.2371e-06
NZ_CP047340.1\|WP_075670932.1\|700344_701766_-\|iron-sulfur-cluster-binding-protein	gnl\|CDD\|129374	TIGR00273, Uncharacterized_electron_transport_protein_YkgF, iron-sulfur cluster-binding protein. Members of this family have a perfect 4Fe-4S binding motif C-x(2)-C-x(2)-C-x(3)-CP followed by either a perfect or imperfect (the first Cys replaced by Ser) second copy. Members probably bind two 4fe-4S iron-sulfur clusters. [Energy metabolism, Electron transport].	0
NZ_CP047340.1\|WP_075670930.1\|699638_700343_-\|lactate-utilization-protein-C	gnl\|CDD\|224473	COG1556, COG1556, Uncharacterized conserved protein [Function unknown].	3.18862e-64
NZ_CP047340.1\|WP_156733780.1\|711672_712647_+\|type-I-F-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|132676	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the YPEST subtype of CRISPR/Cas system.	4.97363e-172
NZ_CP047340.1\|WP_075670926.1\|698309_698654_-\|DMT-family-protein	gnl\|CDD\|377316	pfam04342, DMT_6, Putative member of DMT superfamily (DUF486). This family contains several proteins of uncharacterized function. The family is represented in the Transport classification database as 2.A.7.34, though the exact nature of what is transported is not known.	1.85019e-53
NZ_CP047340.1\|WP_156733772.1\|718393_719377_+\|type-I-F-CRISPR-associated-protein-Csy3	gnl\|CDD\|378222	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2463 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy3, for CRISPR/Cas Subtype Ypest protein 3.	0
NZ_CP047340.1\|WP_099659346.1\|708799_709687_+\|PhzF-family-phenazine-biosynthesis-protein	gnl\|CDD\|223461	COG0384, COG0384, Predicted epimerase, PhzC/PhzF homolog [General function prediction only].	3.29733e-75
NZ_CP047340.1\|WP_156733783.1\|706072_707623_-\|HAMP-domain-containing-protein	gnl\|CDD\|185001	PRK15041, PRK15041, methyl-accepting chemotaxis protein.	4.99466e-80
NZ_CP047340.1\|WP_006533588.1\|723176_723611_+\|type-II-toxin-antitoxin-system-RatA-family-toxin	gnl\|CDD\|182678	PRK10724, PRK10724, type II toxin-antitoxin system RatA family toxin.	2.74661e-84
NZ_CP047340.1\|WP_156733776.1\|716036_717386_+\|type-I-F-CRISPR-associated-protein-Csy1	gnl\|CDD\|187866	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins; Predicted subunit of the Cascade complex; signature gene for I-F subtype; also known as Csy1 family.	1.25507e-131
NZ_CP047340.1\|WP_075673655.1\|722537_723020_-\|SsrA-binding-protein-SmpB	gnl\|CDD\|235455	PRK05422, smpB, SsrA-binding protein SmpB.	1.19817e-87
NZ_CP047340.1\|WP_075670928.1\|699110_699515_+\|DUF1311-domain-containing-protein	gnl\|CDD\|377758	pfam07007, LprI, Lysozyme inhibitor LprI. This family consists of several bacterial proteins of around 120 residues in length. Members of this family contain four highly conserved cysteine residues. Family members include lipoprotein LprI from Mycobacterium, which binds to and inhibits macrophage lysozyme, which may aid bacterial survival.	4.43412e-12

>NZ_CP047340.1|WP_099659346.1|708799_709687_+|PhzF-family-phenazine-biosynthesis-protein
MQNEVIRSVEHEIKVHLINSFTRNNKGGNPAGVVLNPPLLSDEQKIAIAKEVGFSETAFVYQGEETDFKVDFFTPEGEVDFCGHATLAVFFTLSSLNLLASGHYTQKTKAGILSVAIDTENVVMEQSLPVSRQAPSVDDVATALGINREVILETGLPIEIFSTGLPDILIPVQFGQLDMLKPNFDAIANLSREFNTIGFHVFELSQDKEITAHCRNFAPLYGINEESATGSSSGALGCYLVKHVFPHKTHFLLEQGRAMQCSSLIHVIIDSTENTISRVRVGGKATMIGSKIITL
>NZ_CP047340.1|WP_156733781.1|708130_708709_+|histidine-phosphatase-family-protein
MRSVFIFLSIFILGFSHMAYSDQTLVFIRHGEKPDNDSGQLTCKGLNRALALPDVLINQFGKPDALFAAAPKQSKLGNSLRSLQTISPIAIKTSLPIHLQYHAKEIKELREDLLSQQYENSVIFIAWEHDNLVKVARDIMKQEGGDPKLIPKWKSSDFDSIYILKIIREGDKKNVIFEQKQQGLDSVSEDCP
>NZ_CP047340.1|WP_156733783.1|706072_707623_-|HAMP-domain-containing-protein
MFFKNFKIRTKLTIAFTTFVMLIMLGSGFALMGLNSANQDIHDVVDDIYPATVKANLLINNFNEFIIFQQLTMLDEQGSLAAEQESKKAEITAKVAQLLKELDETTHDAESKKILAEVYDIRQQYITSQNFVVKAFNENNRHAAVNELITKTSAIQLKYRDKILEFIELQNKKMNEAGDAVEHDFIEKRIFLVLLTLASIIIGGILGWFITKGITLPLEKAINFAKAIANGDLTQEVKTDYHDEAGILLRTLAEMKMHLLDVVQNVQNGAENISSAAEQITAGSQNLAARTEEQATSVEETASSMEQMTSTVKNTADHTHDAINVAEKTEIAVHHNGEMMLQLTEKMRAINSSSSQMTDIINLIDAIAFQTNILALNAAVEAARAGEHGKGFAVVAGEVRLLAQKSADSANDIRTLIDNSSTQTQEGMELVEQAGSQIQKMITDVEDISTLLREIGQASNEQSDGISQINNAISQLDSTTQQNAGLVEESVAAANSLNEQALNLNKLVNYFQIHRA
>NZ_CP047340.1|WP_075670936.1|702617_704144_-|L-lactate-permease
MSDYLSFLLGIVPLAVLIFMILKMKSAVHHAVLVSLVITVALAIFHWNNTIQFASVSVLYGAVKGLWPIIIVILAAIYSYNLMLKTGGMDVLKDVLAGISDDKRVQVLLISWCFGGFLEAVAGYGTAVAIPIGILIALGFDPFKAAVASLVANTVPTAFGAVGIPVSILAQNTGLDVLVLSKTIIIQLGLFNILLPFVIVAIAGGGIKAIKGVGFITLMCGISTLIPQYIVAANLGAELPAFAGSLVSLIVVIFLAKRMKNSGDKQKNVKKHTGKELLVASSIYLFTFIFILACSPLFPAIQSMAGAISTKIPFVLSETQTEYQTIAWLSTPGVLIILASFVGGTIQGASISTLISVLVKTTIQLKNSIIAITAIVAMATVMDFSGMIGSIAETLVDFTGAGFIFIAPVIGALGTFVTGSDTNSNVLFGKLQTSAAAKLNIDPFILAAANTSGATGGKMISPQSIAIAVSATKMDGQSSAIMRETLKYCIAYIIILGAKIGIIYHLMN
>NZ_CP047340.1|WP_099659343.1|701778_702498_-|(Fe-S)-binding-protein
MKVNFYATCLGDVLKADSARDTVLLLEKLGCEVLFQERQGCCGQPALNSGYVNNAKPAMKSLIETLEVNDYPIISPAGSCTYAIKGYPTYLADEPQWALRAQGVADRLIDLTSFIVNTLGVVDVGARLPGKAVYHPSCSLTRKLGVVSEPLTLLKHVEGLEMLPFANSETCCGFGGTFSVKMSEISGEMVTEKVKHIMDVSPDYVIGADTSCLINIQGRLSREKRPVKVLHIAQVLMSQ
>NZ_CP047340.1|WP_075670932.1|700344_701766_-|iron-sulfur-cluster-binding-protein
MSIKTSDIDFRPRLEHEMKDTIMRNAVVMAQERIGANRQIMVKELGNWEEWRDRAEQIRNHVLENLDAYLYQLSEKVTENGGHVYFAKTAEDASRYICEVAKKKNAKKIVKSKSMVTEEIGMNKALQNEGIEIIETDLGEYILQLDNDPPSHIVVPAIHKDRYQIRKVLNEKLNYEGSETPEDMTLFIRQRIRQDFLSADIGVTGCNFAVAETGTVCLVTNEGNARMTTTLPKTHIAVMGMERVAPTFEEVDPLITMLCRSAVGSRLTSYNTWVTGPREAGNVDGPEEFHLVIVDNGRSEILGSQFKDILRCIRCGACLNTCPAYRNIGGHAYGSIYPGPIGAVISPLLGGYKDFHDLPYACSLCNACNVVCPVKIPLAQLILKHRRVMAETGLTPKAERRVTGMFNYLNSHPALWKVGMNVGAKMAGLMIKNGSTPIKISVLNDWMESRDLPKPDGYSFRSWFKRHKAEGKK
>NZ_CP047340.1|WP_075670930.1|699638_700343_-|lactate-utilization-protein-C
MLNEQNRNEFLQTIAEKLGRPIAHKPQPQPTPINDLAKTRLTNLTQDELCKEFTDFAQTQMVKCVVTKPDEVINSLIELCESYDCKGSVVISGDERLDALGVTKAVSEKYETYIWDPALGRENIVYAERSQIGIVYAEAGLTESGGIVLFSSPEKGRAVSLLPETSIVILRKSDILPRVAQIAERLHKMAQEGVRMPSCINLIGGASSTADIELIKVWGVHGPVHAAYLIIEDC
>NZ_CP047340.1|WP_075670928.1|699110_699515_+|DUF1311-domain-containing-protein
MKISLFLISCSLLTVSFFSSAQGKYDPLAKCYEVTANEPRTAVQACLLDELKLTEQQMNVIYDKSKSDLEDTDSVAAKSAIDALASSQQHFIQFRSAECQRQSALLMGGSGAGDVLLACEIKLNQWRAKILLNN
>NZ_CP047340.1|WP_075670926.1|698309_698654_-|DMT-family-protein
MFYKFTPIILLIISNVFMTFAWYGHLKYGNKPLIVVIILSWLIAFVEYCFAVPANRIGHNYYSAAELKTIQEVITLTIFAIFSVTYLGENFTLNHFIGFLLIGAGALFIFKGPF
>NZ_CP047340.1|WP_099659342.1|697518_697902_-|YkgJ-family-cysteine-cluster-protein
MSKHSNDFIYMQDNPCMHCGACCAYFRVSFYWAEMVSGGGVVPDELTEPLTPFLSCMKGTNSKKPRCEKLIGEVGECVSCSIYEQRPSPCREFQQSWVNGIPNEACDRARAAYGLPPLTHTILPHTA
>NZ_CP047340.1|WP_156733780.1|711672_712647_+|type-I-F-CRISPR-associated-endonuclease-Cas1
MEDLSPSDLKTILHSKRANMYYLEYCRVMQKDGRVLYLTESKKENLYFNIPIANTTVLLLGNGTSITQAAMRMLSQAGVLVGFCGGGGTPLHMATEVEWFTPQSEYRPTEYLQGWLSFWFDDEKRLEVAKQFQRARIGYLQTVWSKDRELKNQGFIFKDELIQQALSTFYERTDKAAKSADLLLTEAQLTKILYKYAANNTNLKNFTRQHDSTTLANDFLNHGNYLAYGLAASCLWVLGIPHGFAVMHGKTRRGALVFDVADLIKDAVVLPWAFVCAKENANEQEFRQQVLQAFIEHKSMEFMFNTIKAIALNEPSVDNGGCES
>NZ_CP047340.1|WP_156733778.1|712643_716027_+|type-I-F-CRISPR-associated-helicase-Cas3
MMVIFVSECEKNALKKTRRVLDAFADRIGNNTWQTLITEDGLQTVKKMLRKTASRSTAVSCHWIRSRSRSQLLWVVGNRSKFNFEGVVPVNRTSLNLEHREWESGWYLNEIIVLASALAGLFHDIGKSNALFQKKLQGKTQSKGEPYRHEWISLRLFEAFTKGKSDQDWIKQLAELTDEKVAKDWNTQLTQTIFIDAPNKYQNPFSDLASFAKLIAWLVVSHHRLPKNNDLNKPVNISDMNLWLSHCFDCHWNSSNALDMSKYSQQVLKDNWSFPNGTPFLSNTWRRKAAKLAVRALNSPLLTNRAISWFEQRFVGHMARLSLMLADHYYSSLRLNEGQFAWRDLDYTPIANTDRNSVRSTSTVSKQKLDEHNIGVSVNAQHFASNLPVLKYTLPAITQHRLFSKSSGIAKYNWQDKAYIQAKAISNATENQGFFGVNMASTGCGKTIANARIMYGLANEREGCRFSVALGLRTLTLQTGDTYRDLLKLGDDELAVLIGSQAVKALHELNSLELNHGSESSEDWFEQLFVSYEGQIYDGRLKHWLSASPKLEQLVSAPVLVSTIDHLMPATESQSGGKQIAPMLRLLTSDLVLDEPDDFGLEDMPALCRLVNWAGMLGSRVLLSSATLPPSLIKNLFDAYKTGREHFNQAQFAQQKQLPIWCAWIDEFTTKTEEISQIADFVMAHRQFIDKRVTELSKNDKPLRQGSIIHVEETTLADSLSRTAYQQKIYQSVAATFHQQIHQLHQVHRIKSPCGKQVSLGVIRMANINPMAAVATELIQLSPQVGYRICYCIYHSQFPLAMRSNKEHKLDRLLERHAPDALWQQPEIMQVLDKSSEQNIIFVVLGTSVVEVGRDHDYDWAIAESSSMRSLIQLAGRIQRHRQQVPTHPNLIVLNKNIRALKGEPVAYCHPGFESKALPLATHDISQLLGLELQHISAISRVKEPKLDGKDFLSDPKTLRQSAYPVQSFLVQEHRALRFALEAMPKPEFYHSGNEANRWWVDEAGWNAEFIQQTEFRKSERQEAFVLRCDENEQLEWRQLDTTNKPYQYVPKSSRFKMIEVELAKGCQWWFDVSPIDIYEQFAKQLDLSLARTSERLGEIQLRAEKEDQIIEWVWHNQLGVFQQENN
>NZ_CP047340.1|WP_156733776.1|716036_717386_+|type-I-F-CRISPR-associated-protein-Csy1
MDGTLSAAIAEYIEQRKQEKLKPLQKKLNSTLEKSSDPVEIAQAKVEYSDNAMPIELEFEPKNWLSNKAKLAKQITIATHAPKYLNSDAKASGIYLDKFEILDNRYLVTQHIPKKSIDFIGNAAVLDVATFLKMEVKGESLIDQLNANHINALKIFTDDPDLLDLWKNGFKQAFYDENVSAHTLSKQVYFLINKEKKEYHLLCPLYSSALSQELYFKIRQSRYGDSKEIRDAYKKGLYDERSNVYFLETAVQMFGGSKPQNISQLNSERHGQGFLLNCAPPTYQAQIKPPLHSLSIFNRQFSFQTNALIREFKAFLAGLTEKDRNFKTRYQRDYHYVKPLIDSLLNFIAEIQSIPNCSGWSNSPECKMKRAHQLLLDIDNPDLVFQREREQGDWLESVANDFSLWLLRKLENKQVYVLGDVEHRYFKKLCLNELRTFERISVIFEENNA
>NZ_CP047340.1|WP_156733774.1|717382_718375_+|type-I-F-CRISPR-associated-protein-Csy2
MKHYLLLKKIDVQNANAIAGLTYGFPAVTNFLGFAHALSRQLSQTLSVSLDGVAVVSHKNNVHVRRPSGKGDYVFALTRNPLTLKGKTAPINEEGRMWMQISLLIEVDGIVGGDKQTEQNLLSNISRLAPAMRLAGGQITNIESIQLLTSEKEQQHALRRLMPGFVLVDRCDYLAEHFQHLQQQNESSTLMDAWCDFATLKFSAIPQEGEDATENGESKRKANWEYQPKPNSGYLVPISTGYCAISECYAPGQVANVRDTSIPATFAEVAYSVGEWLSVHRLVNIQQGIWRYHHKYPWYLAKGLAVQEDIPEPVVIERAPESTDFDPDFI
>NZ_CP047340.1|WP_156733772.1|718393_719377_+|type-I-F-CRISPR-associated-protein-Csy3
MASKKLETPSVLAFEAKLIPSDALMFAGNWEQNEWLPIMVGEKSVRGTISNRLKSALANDPAKLDAEVSKANIQTIDTAALSHHTDTLKVVFSLRILGGLDIPSTCNSPDYQQALAEKIHVYQAETKFKELAQRYAINIANGRFLWRNRVGAKNVRVEVNAVDKAFTFNSYDYSLHEFKSNEQVDGLAELIQQGLQGEAMFLNITAYSQLGEGQPVFPSQELVMGGGKGDKSKFLYQLNGQAAMHSQKIGNALRTIDTWHSAVEEVGPIAIEPYGSVTNRGAAYRQPKEKMDFYKLLDGWMLKDQMPTIEQQHYIMAMLIRGGVFGE
>NZ_CP047340.1|WP_156733770.1|719386_720031_+|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4
MKYYQDIKLLPATEISLGFIWEKVYQQIHLMLVEHKLDTNVSEIGLSFPAYGDKTFPLGDRLRLFTETEISLSRLNVAKWLQQLSDYIRIEPVKPVPSNVGEYACFTRHNPKSQQRRLKQLERRTSYLAQKHGVDEDTMRAELLASIEQKSGESKLPYINVQSLSTSTEPQLRHKFMLFIQCNKSNSQLRNSNTFSCYGLSQKEKGKQTFVPWF
>NZ_CP047340.1|WP_156733768.1|721302_721512_+|hypothetical-protein
MVYGKYTENIQKRNATIEIALPFLIQDFRSYSLESDLSDDEVKSTIRKVKEYLIQAENRYKKTKGYDKS
>NZ_CP047340.1|WP_156733766.1|721580_721934_-|hypothetical-protein
MKTSELIKKLQEIDKTVPFDADIVTGDDWLPCGVENVYHAPPNTYIQFNSYDADEMRGDPQENNRRTSIVELSARVSEINNIVKMIESNPSITAWDIIKELNFRSKRMSEMANLLKK
>NZ_CP047340.1|WP_075673655.1|722537_723020_-|SsrA-binding-protein-SmpB
MTKKKSHKPGSATIALNKRARHEYFIEDEIEAGLALQGWEVKSLRAGKANISDSYVVMRDGEAYLFGATITPLNVASTHVVCDPTRTRKLLLKQRELDNLYGQINRDGYTVVALSLYWKNAWCKIKIGVAKGKKDHDKRDTIKDREWKLDKARIMKNANR
>NZ_CP047340.1|WP_006533588.1|723176_723611_+|type-II-toxin-antitoxin-system-RatA-family-toxin
MPQISRSALVPFSTEQMFKLVNDVLTYPDFLPGCVGSKLIKSTPEEMIASINVSKAGISKTFTTHNFLKTNERVDMRLVDGPFRKLTGGWVFTALDDNACKIEFQLDFEFTNKLIELAFGRIFKDLTNNMVQAFTHRAKEIYRD

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Crispr_ID: NZ_CP047340_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047340_3

720183-721110

TypeI-F

I-F

Consensus_repeat	Method
GTCCACTGCCGCATAGGCAGCTTAGAAA	PILER-CR
GTCCACTGCCGCATAGGCAGCTTAGAAA	CRISPRCasFinder
GTCCACTGCCGCATAGGCAGCTTAGAAA	CRT

15 spacers

cas6f,cas7f,cas5f,cas8f,cas3-cas2,cas1

The CRISPR arrays of NZ_CP047340_3

>merge|NZ_CP047340|3|720183-721110|PILER-CR,CRISPRCasFinder,CRT
GTCCACTGCCGCATAGGCAGCTTAGAAAATAGATAAATATTTATGTTTTCTCATTGAAATGTCCACTGCCGCATAGGCAGCTTAGAAAATATTATCTTCACGGCCTTGCTTTGTAGATTGGTCCACTGCCGCATAGGCAGCTTAGAAAATTAGTGAATGTGCCCAGGCGAAAATTAATCGGTCCACTGCCGCATAGGCAGCTTAGAAAACCCGATACTCGATGTAAATCATTTAAACAATGTCCACTGCCGCATAGGCAGCTTAGAAATAACCTGTCGATGGTTTCACAAAGCAACTTATGTCCACTGCCGCATAGGCAGCTTAGAAACGAAGAATATCCTTGATGACACTTACCAGAGAGTCCACTGCCGCATAGGCAGCTTAGAAAAGTTAACGGTAATAATAAAGGCTCAATGCTTTGTCCACTGCCGCATAGGCAGCTTAGAAAATCACGCCACACTTCATCAATCACCGGTGTCAGTCCACTGCCGCATAGGCAGCTTAGAAAGCCTGAGGTGGCAAAATAATCAGGCTCAATATGTCCACTGCCGCATAGGCAGCTTAGAAATAGCGGGAAAAACCTTAACCGATGTGCAAAAAGTCCACTGCCGCATAGGCAGCTTAGAAAATATAAACCTATTTTTGAGCGTTTATTTTTATGTCCACTGCCGCATAGGCAGCTTAGAAAACTAGCAGAATTGATACCGCTAGAATCGCCATGTCCACTGCCGCATAGGCAGCTTAGAAATACAAGATTTTGCGCTTCTAAAACTTCGTTGAGTCCACTGCCGCATAGGCAGCTTAGAAATGCAGTAATTTGCACACTTGGCGAAACGTCATGTTCACTGCCGCATAGGCAGCTTAGAAAAGTCAAACTCATAACTAATTCTTTTTGTTCGTGTTCACTGCCGCATAGGCAGCTTAGAAA

>NZ_CP047340|3|2|720183-721110|PILER-CR
GTCCACTGCCGCATAGGCAGCTTAGAAA	ATAGATAAATATTTATGTTTTCTCATTGAAAT
GTCCACTGCCGCATAGGCAGCTTAGAAA	ATATTATCTTCACGGCCTTGCTTTGTAGATTG
GTCCACTGCCGCATAGGCAGCTTAGAAA	ATTAGTGAATGTGCCCAGGCGAAAATTAATCG
GTCCACTGCCGCATAGGCAGCTTAGAAA	ACCCGATACTCGATGTAAATCATTTAAACAAT
GTCCACTGCCGCATAGGCAGCTTAGAAA	TAACCTGTCGATGGTTTCACAAAGCAACTTAT
GTCCACTGCCGCATAGGCAGCTTAGAAA	CGAAGAATATCCTTGATGACACTTACCAGAGA
GTCCACTGCCGCATAGGCAGCTTAGAAA	AGTTAACGGTAATAATAAAGGCTCAATGCTTT
GTCCACTGCCGCATAGGCAGCTTAGAAA	ATCACGCCACACTTCATCAATCACCGGTGTCA
GTCCACTGCCGCATAGGCAGCTTAGAAA	GCCTGAGGTGGCAAAATAATCAGGCTCAATAT
GTCCACTGCCGCATAGGCAGCTTAGAAA	TAGCGGGAAAAACCTTAACCGATGTGCAAAAA
GTCCACTGCCGCATAGGCAGCTTAGAAA	ATATAAACCTATTTTTGAGCGTTTATTTTTAT
GTCCACTGCCGCATAGGCAGCTTAGAAA	ACTAGCAGAATTGATACCGCTAGAATCGCCAT
GTCCACTGCCGCATAGGCAGCTTAGAAA	TACAAGATTTTGCGCTTCTAAAACTTCGTTGA
GTCCACTGCCGCATAGGCAGCTTAGAAA	TGCAGTAATTTGCACACTTGGCGAAACGTCAT
GTTCACTGCCGCATAGGCAGCTTAGAAA	AGTCAAACTCATAACTAATTCTTTTTGTTCGT
GTTCACTGCCGCATAGGCAGCTTAGAAA

>NZ_CP047340|3|3|720183-721110|CRISPRCasFinder
GTCCACTGCCGCATAGGCAGCTTAGAAA	ATAGATAAATATTTATGTTTTCTCATTGAAAT
GTCCACTGCCGCATAGGCAGCTTAGAAA	ATATTATCTTCACGGCCTTGCTTTGTAGATTG
GTCCACTGCCGCATAGGCAGCTTAGAAA	ATTAGTGAATGTGCCCAGGCGAAAATTAATCG
GTCCACTGCCGCATAGGCAGCTTAGAAA	ACCCGATACTCGATGTAAATCATTTAAACAAT
GTCCACTGCCGCATAGGCAGCTTAGAAA	TAACCTGTCGATGGTTTCACAAAGCAACTTAT
GTCCACTGCCGCATAGGCAGCTTAGAAA	CGAAGAATATCCTTGATGACACTTACCAGAGA
GTCCACTGCCGCATAGGCAGCTTAGAAA	AGTTAACGGTAATAATAAAGGCTCAATGCTTT
GTCCACTGCCGCATAGGCAGCTTAGAAA	ATCACGCCACACTTCATCAATCACCGGTGTCA
GTCCACTGCCGCATAGGCAGCTTAGAAA	GCCTGAGGTGGCAAAATAATCAGGCTCAATAT
GTCCACTGCCGCATAGGCAGCTTAGAAA	TAGCGGGAAAAACCTTAACCGATGTGCAAAAA
GTCCACTGCCGCATAGGCAGCTTAGAAA	ATATAAACCTATTTTTGAGCGTTTATTTTTAT
GTCCACTGCCGCATAGGCAGCTTAGAAA	ACTAGCAGAATTGATACCGCTAGAATCGCCAT
GTCCACTGCCGCATAGGCAGCTTAGAAA	TACAAGATTTTGCGCTTCTAAAACTTCGTTGA
GTCCACTGCCGCATAGGCAGCTTAGAAA	TGCAGTAATTTGCACACTTGGCGAAACGTCAT
GTTCACTGCCGCATAGGCAGCTTAGAAA	AGTCAAACTCATAACTAATTCTTTTTGTTCGT
GTTCACTGCCGCATAGGCAGCTTAGAAA

>NZ_CP047340|3|2|720183-721110|CRT
GTCCACTGCCGCATAGGCAGCTTAGAAA	ATAGATAAATATTTATGTTTTCTCATTGAAAT
GTCCACTGCCGCATAGGCAGCTTAGAAA	ATATTATCTTCACGGCCTTGCTTTGTAGATTG
GTCCACTGCCGCATAGGCAGCTTAGAAA	ATTAGTGAATGTGCCCAGGCGAAAATTAATCG
GTCCACTGCCGCATAGGCAGCTTAGAAA	ACCCGATACTCGATGTAAATCATTTAAACAAT
GTCCACTGCCGCATAGGCAGCTTAGAAA	TAACCTGTCGATGGTTTCACAAAGCAACTTAT
GTCCACTGCCGCATAGGCAGCTTAGAAA	CGAAGAATATCCTTGATGACACTTACCAGAGA
GTCCACTGCCGCATAGGCAGCTTAGAAA	AGTTAACGGTAATAATAAAGGCTCAATGCTTT
GTCCACTGCCGCATAGGCAGCTTAGAAA	ATCACGCCACACTTCATCAATCACCGGTGTCA
GTCCACTGCCGCATAGGCAGCTTAGAAA	GCCTGAGGTGGCAAAATAATCAGGCTCAATAT
GTCCACTGCCGCATAGGCAGCTTAGAAA	TAGCGGGAAAAACCTTAACCGATGTGCAAAAA
GTCCACTGCCGCATAGGCAGCTTAGAAA	ATATAAACCTATTTTTGAGCGTTTATTTTTAT
GTCCACTGCCGCATAGGCAGCTTAGAAA	ACTAGCAGAATTGATACCGCTAGAATCGCCAT
GTCCACTGCCGCATAGGCAGCTTAGAAA	TACAAGATTTTGCGCTTCTAAAACTTCGTTGA
GTCCACTGCCGCATAGGCAGCTTAGAAA	TGCAGTAATTTGCACACTTGGCGAAACGTCAT
GTTCACTGCCGCATAGGCAGCTTAGAAA	AGTCAAACTCATAACTAATTCTTTTTGTTCGT
GTTCACTGCCGCATAGGCAGCTTAGAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047340.1\|WP_156733774.1\|717382_718375_+\|type-I-F-CRISPR-associated-protein-Csy2	cas5f	pfam09614_cas5f_CAS-I-F	gnl\|CDD\|378221
NZ_CP047340.1\|WP_156733778.1\|712643_716027_+\|type-I-F-CRISPR-associated-helicase-Cas3	cas3-cas2	cas3-cas2-CAS-I-F	gnl\|CDD\|274201
NZ_CP047340.1\|WP_156733766.1\|721580_721934_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047340.1\|WP_075673657.1\|724103_724466_-\|outer-membrane-protein-assembly-factor-BamE	unknown	unknown	gnl\|CDD\|183190
NZ_CP047340.1\|WP_075670936.1\|702617_704144_-\|L-lactate-permease	unknown	unknown	gnl\|CDD\|224535
NZ_CP047340.1\|WP_075673656.1\|723603_723897_+\|RnfH-family-protein	unknown	unknown	gnl\|CDD\|234982
NZ_CP047340.1\|WP_156733770.1\|719386_720031_+\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	cas6f	pfam09618_cas6f_CAS-I-F	gnl\|CDD\|187870
NZ_CP047340.1\|WP_156733781.1\|708130_708709_+\|histidine-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|132718
NZ_CP047340.1\|WP_156733780.1\|711672_712647_+\|type-I-F-CRISPR-associated-endonuclease-Cas1	cas1	cd09718_cas1_CAS-I-F	gnl\|CDD\|132676
NZ_CP047340.1\|WP_156733772.1\|718393_719377_+\|type-I-F-CRISPR-associated-protein-Csy3	cas7f	pfam09615_cas7f_CAS-I-F	gnl\|CDD\|378222
NZ_CP047340.1\|WP_083629113.1\|724579_726241_-\|DNA-repair-protein-RecN	unknown	unknown	gnl\|CDD\|236781
NZ_CP047340.1\|WP_099659346.1\|708799_709687_+\|PhzF-family-phenazine-biosynthesis-protein	unknown	unknown	gnl\|CDD\|223461
NZ_CP047340.1\|WP_156733783.1\|706072_707623_-\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|185001
NZ_CP047340.1\|WP_006533588.1\|723176_723611_+\|type-II-toxin-antitoxin-system-RatA-family-toxin	unknown	unknown	gnl\|CDD\|182678
NZ_CP047340.1\|WP_156733768.1\|721302_721512_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047340.1\|WP_075673658.1\|727328_727940_+\|nucleotide-exchange-factor-GrpE	unknown	unknown	gnl\|CDD\|184539
NZ_CP047340.1\|WP_075673655.1\|722537_723020_-\|SsrA-binding-protein-SmpB	unknown	unknown	gnl\|CDD\|235455
NZ_CP047340.1\|WP_083629114.1\|726328_727228_-\|NAD(+)-kinase	unknown	unknown	gnl\|CDD\|235122
NZ_CP047340.1\|WP_075673659.1\|728057_728738_-\|uracil-DNA-glycosylase	unknown	unknown	gnl\|CDD\|235376
NZ_CP047340.1\|WP_156733776.1\|716036_717386_+\|type-I-F-CRISPR-associated-protein-Csy1	cas8f	cd09735_cas8f_CAS-I-F	gnl\|CDD\|187866

Protein	Function_ID	Function_description	E-value
NZ_CP047340.1\|WP_156733774.1\|717382_718375_+\|type-I-F-CRISPR-associated-protein-Csy2	gnl\|CDD\|378221	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2464 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy2, for CRISPR/Cas Subtype Ypest protein 2.	3.14092e-120
NZ_CP047340.1\|WP_156733778.1\|712643_716027_+\|type-I-F-CRISPR-associated-helicase-Cas3	gnl\|CDD\|274201	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST. The helicase in many CRISPR-associated (cas) gene clusters is designated Cas3, and most Cas3 proteins are described by model TIGR01587. Members of this family are considerably larger, show a number of motifs in common with TIGR01587 sequences, and replace Cas3 in some CRISPR/cas loci in a number of Proteobacteria, including Yersinia pestis, Chromobacterium violaceum, Erwinia carotovora subsp. atroseptica SCRI1043, Photorhabdus luminescens subsp. laumondii TTO1, Legionella pneumophila, etc.	0
NZ_CP047340.1\|WP_075673657.1\|724103_724466_-\|outer-membrane-protein-assembly-factor-BamE	gnl\|CDD\|183190	PRK11548, PRK11548, outer membrane protein assembly factor BamE.	6.12185e-71
NZ_CP047340.1\|WP_075670936.1\|702617_704144_-\|L-lactate-permease	gnl\|CDD\|224535	COG1620, LldP, L-lactate permease [Energy production and conversion].	9.46171e-113
NZ_CP047340.1\|WP_075673656.1\|723603_723897_+\|RnfH-family-protein	gnl\|CDD\|234982	PRK01777, PRK01777, RnfH family protein.	3.95184e-45
NZ_CP047340.1\|WP_156733770.1\|719386_720031_+\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	gnl\|CDD\|187870	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6f is an endoribonuclease that generates crRNA; This family is specific for CRISPR/Cas system I-F subtype; Possesses RRM fold; also known as Csy4 family.	5.70031e-52
NZ_CP047340.1\|WP_156733781.1\|708130_708709_+\|histidine-phosphatase-family-protein	gnl\|CDD\|132718	cd07067, HP_PGM_like, Histidine phosphatase domain found in phosphoglycerate mutases and related proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction. Subgroup of the catalytic domain of a functionally diverse set of proteins, most of which are phosphatases. The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. This subgroup contains cofactor-dependent and cofactor-independent phosphoglycerate mutases (dPGM, and BPGM respectively), fructose-2,6-bisphosphatase (F26BP)ase, Sts-1, SixA, and related proteins. Functions include roles in metabolism, signaling, or regulation, for example, F26BPase affects glycolysis and gluconeogenesis through controlling the concentration of F26BP; BPGM controls the concentration of 2,3-BPG (the main allosteric effector of hemoglobin in human blood cells); human Sts-1 is a T-cell regulator; Escherichia coli Six A participates in the ArcB-dependent His-to-Asp phosphorelay signaling system. Deficiency and mutation in many of the human members result in disease, for example erythrocyte BPGM deficiency is a disease associated with a decrease in the concentration of 2,3-BPG.	1.2371e-06
NZ_CP047340.1\|WP_156733780.1\|711672_712647_+\|type-I-F-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|132676	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the YPEST subtype of CRISPR/Cas system.	4.97363e-172
NZ_CP047340.1\|WP_075673655.1\|722537_723020_-\|SsrA-binding-protein-SmpB	gnl\|CDD\|235455	PRK05422, smpB, SsrA-binding protein SmpB.	1.19817e-87
NZ_CP047340.1\|WP_083629113.1\|724579_726241_-\|DNA-repair-protein-RecN	gnl\|CDD\|236781	PRK10869, PRK10869, recombination and repair protein; Provisional.	0
NZ_CP047340.1\|WP_099659346.1\|708799_709687_+\|PhzF-family-phenazine-biosynthesis-protein	gnl\|CDD\|223461	COG0384, COG0384, Predicted epimerase, PhzC/PhzF homolog [General function prediction only].	3.29733e-75
NZ_CP047340.1\|WP_156733783.1\|706072_707623_-\|HAMP-domain-containing-protein	gnl\|CDD\|185001	PRK15041, PRK15041, methyl-accepting chemotaxis protein.	4.99466e-80
NZ_CP047340.1\|WP_006533588.1\|723176_723611_+\|type-II-toxin-antitoxin-system-RatA-family-toxin	gnl\|CDD\|182678	PRK10724, PRK10724, type II toxin-antitoxin system RatA family toxin.	2.74661e-84
NZ_CP047340.1\|WP_075673658.1\|727328_727940_+\|nucleotide-exchange-factor-GrpE	gnl\|CDD\|184539	PRK14150, PRK14150, heat shock protein GrpE; Provisional.	2.32788e-91
NZ_CP047340.1\|WP_156733772.1\|718393_719377_+\|type-I-F-CRISPR-associated-protein-Csy3	gnl\|CDD\|378222	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2463 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy3, for CRISPR/Cas Subtype Ypest protein 3.	0
NZ_CP047340.1\|WP_083629114.1\|726328_727228_-\|NAD(+)-kinase	gnl\|CDD\|235122	PRK03378, ppnK, inorganic polyphosphate/ATP-NAD kinase; Provisional.	0
NZ_CP047340.1\|WP_075673659.1\|728057_728738_-\|uracil-DNA-glycosylase	gnl\|CDD\|235376	PRK05254, PRK05254, uracil-DNA glycosylase; Provisional.	2.23836e-153
NZ_CP047340.1\|WP_156733776.1\|716036_717386_+\|type-I-F-CRISPR-associated-protein-Csy1	gnl\|CDD\|187866	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins; Predicted subunit of the Cascade complex; signature gene for I-F subtype; also known as Csy1 family.	1.25507e-131

>NZ_CP047340.1|WP_156733770.1|719386_720031_+|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4
MKYYQDIKLLPATEISLGFIWEKVYQQIHLMLVEHKLDTNVSEIGLSFPAYGDKTFPLGDRLRLFTETEISLSRLNVAKWLQQLSDYIRIEPVKPVPSNVGEYACFTRHNPKSQQRRLKQLERRTSYLAQKHGVDEDTMRAELLASIEQKSGESKLPYINVQSLSTSTEPQLRHKFMLFIQCNKSNSQLRNSNTFSCYGLSQKEKGKQTFVPWF
>NZ_CP047340.1|WP_156733772.1|718393_719377_+|type-I-F-CRISPR-associated-protein-Csy3
MASKKLETPSVLAFEAKLIPSDALMFAGNWEQNEWLPIMVGEKSVRGTISNRLKSALANDPAKLDAEVSKANIQTIDTAALSHHTDTLKVVFSLRILGGLDIPSTCNSPDYQQALAEKIHVYQAETKFKELAQRYAINIANGRFLWRNRVGAKNVRVEVNAVDKAFTFNSYDYSLHEFKSNEQVDGLAELIQQGLQGEAMFLNITAYSQLGEGQPVFPSQELVMGGGKGDKSKFLYQLNGQAAMHSQKIGNALRTIDTWHSAVEEVGPIAIEPYGSVTNRGAAYRQPKEKMDFYKLLDGWMLKDQMPTIEQQHYIMAMLIRGGVFGE
>NZ_CP047340.1|WP_156733774.1|717382_718375_+|type-I-F-CRISPR-associated-protein-Csy2
MKHYLLLKKIDVQNANAIAGLTYGFPAVTNFLGFAHALSRQLSQTLSVSLDGVAVVSHKNNVHVRRPSGKGDYVFALTRNPLTLKGKTAPINEEGRMWMQISLLIEVDGIVGGDKQTEQNLLSNISRLAPAMRLAGGQITNIESIQLLTSEKEQQHALRRLMPGFVLVDRCDYLAEHFQHLQQQNESSTLMDAWCDFATLKFSAIPQEGEDATENGESKRKANWEYQPKPNSGYLVPISTGYCAISECYAPGQVANVRDTSIPATFAEVAYSVGEWLSVHRLVNIQQGIWRYHHKYPWYLAKGLAVQEDIPEPVVIERAPESTDFDPDFI
>NZ_CP047340.1|WP_156733776.1|716036_717386_+|type-I-F-CRISPR-associated-protein-Csy1
MDGTLSAAIAEYIEQRKQEKLKPLQKKLNSTLEKSSDPVEIAQAKVEYSDNAMPIELEFEPKNWLSNKAKLAKQITIATHAPKYLNSDAKASGIYLDKFEILDNRYLVTQHIPKKSIDFIGNAAVLDVATFLKMEVKGESLIDQLNANHINALKIFTDDPDLLDLWKNGFKQAFYDENVSAHTLSKQVYFLINKEKKEYHLLCPLYSSALSQELYFKIRQSRYGDSKEIRDAYKKGLYDERSNVYFLETAVQMFGGSKPQNISQLNSERHGQGFLLNCAPPTYQAQIKPPLHSLSIFNRQFSFQTNALIREFKAFLAGLTEKDRNFKTRYQRDYHYVKPLIDSLLNFIAEIQSIPNCSGWSNSPECKMKRAHQLLLDIDNPDLVFQREREQGDWLESVANDFSLWLLRKLENKQVYVLGDVEHRYFKKLCLNELRTFERISVIFEENNA
>NZ_CP047340.1|WP_156733778.1|712643_716027_+|type-I-F-CRISPR-associated-helicase-Cas3
MMVIFVSECEKNALKKTRRVLDAFADRIGNNTWQTLITEDGLQTVKKMLRKTASRSTAVSCHWIRSRSRSQLLWVVGNRSKFNFEGVVPVNRTSLNLEHREWESGWYLNEIIVLASALAGLFHDIGKSNALFQKKLQGKTQSKGEPYRHEWISLRLFEAFTKGKSDQDWIKQLAELTDEKVAKDWNTQLTQTIFIDAPNKYQNPFSDLASFAKLIAWLVVSHHRLPKNNDLNKPVNISDMNLWLSHCFDCHWNSSNALDMSKYSQQVLKDNWSFPNGTPFLSNTWRRKAAKLAVRALNSPLLTNRAISWFEQRFVGHMARLSLMLADHYYSSLRLNEGQFAWRDLDYTPIANTDRNSVRSTSTVSKQKLDEHNIGVSVNAQHFASNLPVLKYTLPAITQHRLFSKSSGIAKYNWQDKAYIQAKAISNATENQGFFGVNMASTGCGKTIANARIMYGLANEREGCRFSVALGLRTLTLQTGDTYRDLLKLGDDELAVLIGSQAVKALHELNSLELNHGSESSEDWFEQLFVSYEGQIYDGRLKHWLSASPKLEQLVSAPVLVSTIDHLMPATESQSGGKQIAPMLRLLTSDLVLDEPDDFGLEDMPALCRLVNWAGMLGSRVLLSSATLPPSLIKNLFDAYKTGREHFNQAQFAQQKQLPIWCAWIDEFTTKTEEISQIADFVMAHRQFIDKRVTELSKNDKPLRQGSIIHVEETTLADSLSRTAYQQKIYQSVAATFHQQIHQLHQVHRIKSPCGKQVSLGVIRMANINPMAAVATELIQLSPQVGYRICYCIYHSQFPLAMRSNKEHKLDRLLERHAPDALWQQPEIMQVLDKSSEQNIIFVVLGTSVVEVGRDHDYDWAIAESSSMRSLIQLAGRIQRHRQQVPTHPNLIVLNKNIRALKGEPVAYCHPGFESKALPLATHDISQLLGLELQHISAISRVKEPKLDGKDFLSDPKTLRQSAYPVQSFLVQEHRALRFALEAMPKPEFYHSGNEANRWWVDEAGWNAEFIQQTEFRKSERQEAFVLRCDENEQLEWRQLDTTNKPYQYVPKSSRFKMIEVELAKGCQWWFDVSPIDIYEQFAKQLDLSLARTSERLGEIQLRAEKEDQIIEWVWHNQLGVFQQENN
>NZ_CP047340.1|WP_156733780.1|711672_712647_+|type-I-F-CRISPR-associated-endonuclease-Cas1
MEDLSPSDLKTILHSKRANMYYLEYCRVMQKDGRVLYLTESKKENLYFNIPIANTTVLLLGNGTSITQAAMRMLSQAGVLVGFCGGGGTPLHMATEVEWFTPQSEYRPTEYLQGWLSFWFDDEKRLEVAKQFQRARIGYLQTVWSKDRELKNQGFIFKDELIQQALSTFYERTDKAAKSADLLLTEAQLTKILYKYAANNTNLKNFTRQHDSTTLANDFLNHGNYLAYGLAASCLWVLGIPHGFAVMHGKTRRGALVFDVADLIKDAVVLPWAFVCAKENANEQEFRQQVLQAFIEHKSMEFMFNTIKAIALNEPSVDNGGCES
>NZ_CP047340.1|WP_099659346.1|708799_709687_+|PhzF-family-phenazine-biosynthesis-protein
MQNEVIRSVEHEIKVHLINSFTRNNKGGNPAGVVLNPPLLSDEQKIAIAKEVGFSETAFVYQGEETDFKVDFFTPEGEVDFCGHATLAVFFTLSSLNLLASGHYTQKTKAGILSVAIDTENVVMEQSLPVSRQAPSVDDVATALGINREVILETGLPIEIFSTGLPDILIPVQFGQLDMLKPNFDAIANLSREFNTIGFHVFELSQDKEITAHCRNFAPLYGINEESATGSSSGALGCYLVKHVFPHKTHFLLEQGRAMQCSSLIHVIIDSTENTISRVRVGGKATMIGSKIITL
>NZ_CP047340.1|WP_156733781.1|708130_708709_+|histidine-phosphatase-family-protein
MRSVFIFLSIFILGFSHMAYSDQTLVFIRHGEKPDNDSGQLTCKGLNRALALPDVLINQFGKPDALFAAAPKQSKLGNSLRSLQTISPIAIKTSLPIHLQYHAKEIKELREDLLSQQYENSVIFIAWEHDNLVKVARDIMKQEGGDPKLIPKWKSSDFDSIYILKIIREGDKKNVIFEQKQQGLDSVSEDCP
>NZ_CP047340.1|WP_156733783.1|706072_707623_-|HAMP-domain-containing-protein
MFFKNFKIRTKLTIAFTTFVMLIMLGSGFALMGLNSANQDIHDVVDDIYPATVKANLLINNFNEFIIFQQLTMLDEQGSLAAEQESKKAEITAKVAQLLKELDETTHDAESKKILAEVYDIRQQYITSQNFVVKAFNENNRHAAVNELITKTSAIQLKYRDKILEFIELQNKKMNEAGDAVEHDFIEKRIFLVLLTLASIIIGGILGWFITKGITLPLEKAINFAKAIANGDLTQEVKTDYHDEAGILLRTLAEMKMHLLDVVQNVQNGAENISSAAEQITAGSQNLAARTEEQATSVEETASSMEQMTSTVKNTADHTHDAINVAEKTEIAVHHNGEMMLQLTEKMRAINSSSSQMTDIINLIDAIAFQTNILALNAAVEAARAGEHGKGFAVVAGEVRLLAQKSADSANDIRTLIDNSSTQTQEGMELVEQAGSQIQKMITDVEDISTLLREIGQASNEQSDGISQINNAISQLDSTTQQNAGLVEESVAAANSLNEQALNLNKLVNYFQIHRA
>NZ_CP047340.1|WP_075670936.1|702617_704144_-|L-lactate-permease
MSDYLSFLLGIVPLAVLIFMILKMKSAVHHAVLVSLVITVALAIFHWNNTIQFASVSVLYGAVKGLWPIIIVILAAIYSYNLMLKTGGMDVLKDVLAGISDDKRVQVLLISWCFGGFLEAVAGYGTAVAIPIGILIALGFDPFKAAVASLVANTVPTAFGAVGIPVSILAQNTGLDVLVLSKTIIIQLGLFNILLPFVIVAIAGGGIKAIKGVGFITLMCGISTLIPQYIVAANLGAELPAFAGSLVSLIVVIFLAKRMKNSGDKQKNVKKHTGKELLVASSIYLFTFIFILACSPLFPAIQSMAGAISTKIPFVLSETQTEYQTIAWLSTPGVLIILASFVGGTIQGASISTLISVLVKTTIQLKNSIIAITAIVAMATVMDFSGMIGSIAETLVDFTGAGFIFIAPVIGALGTFVTGSDTNSNVLFGKLQTSAAAKLNIDPFILAAANTSGATGGKMISPQSIAIAVSATKMDGQSSAIMRETLKYCIAYIIILGAKIGIIYHLMN
>NZ_CP047340.1|WP_156733768.1|721302_721512_+|hypothetical-protein
MVYGKYTENIQKRNATIEIALPFLIQDFRSYSLESDLSDDEVKSTIRKVKEYLIQAENRYKKTKGYDKS
>NZ_CP047340.1|WP_156733766.1|721580_721934_-|hypothetical-protein
MKTSELIKKLQEIDKTVPFDADIVTGDDWLPCGVENVYHAPPNTYIQFNSYDADEMRGDPQENNRRTSIVELSARVSEINNIVKMIESNPSITAWDIIKELNFRSKRMSEMANLLKK
>NZ_CP047340.1|WP_075673655.1|722537_723020_-|SsrA-binding-protein-SmpB
MTKKKSHKPGSATIALNKRARHEYFIEDEIEAGLALQGWEVKSLRAGKANISDSYVVMRDGEAYLFGATITPLNVASTHVVCDPTRTRKLLLKQRELDNLYGQINRDGYTVVALSLYWKNAWCKIKIGVAKGKKDHDKRDTIKDREWKLDKARIMKNANR
>NZ_CP047340.1|WP_006533588.1|723176_723611_+|type-II-toxin-antitoxin-system-RatA-family-toxin
MPQISRSALVPFSTEQMFKLVNDVLTYPDFLPGCVGSKLIKSTPEEMIASINVSKAGISKTFTTHNFLKTNERVDMRLVDGPFRKLTGGWVFTALDDNACKIEFQLDFEFTNKLIELAFGRIFKDLTNNMVQAFTHRAKEIYRD
>NZ_CP047340.1|WP_075673656.1|723603_723897_+|RnfH-family-protein
MTKIWVEVTYALPDKQYLIPVELTLGDTVEQAIIASNILTICSDIDLTKNKVGIYSRPTKLSDNVRDGDRIEIYRPLIADPKEMRRKRAEKARQKAD
>NZ_CP047340.1|WP_075673657.1|724103_724466_-|outer-membrane-protein-assembly-factor-BamE
MRFKLLKVAALSLVVMTSGCSMFERLVYHPDINQGNYLTPAEVAKVQQGMTQQQVQFALGTPMLKDPFGSQTWYYVFREEPGHQKVRQETLTLTFDSNGILTKIDKQGNMPSFSAPETKS
>NZ_CP047340.1|WP_083629113.1|724579_726241_-|DNA-repair-protein-RecN
MLTQLTISHFAIVRELEIDFSGGMTTITGETGAGKSIAIDALGLCLGNRGDANMVRPGATRADLCARFSLSDTPSAQRWLEEHHLDDHNECLLRRTISTDGRSRGFINGTSVPLSQLRELGSLLIQIHGQHAHQQLLEPRYQKQLLDIYAHEPALLKSMKSAYQTWHQSCQTLATFQQLSLEREARQQLVDYHLKELNEFQPVQGEYPELDQEYKRLSNCGQFLTLSQNSLQILSDNEEQNILSMLNVAKHEITELTSMESQFNSLLEMLEEATIQISEVSDELRHYSDRLEMDPNRLFEVEKRMSKYINLSRKHRVAPEELYDLHQQLIEEKNALLRQNDDCEALIEQVKADHLMALDVAKQLHQVRQQYANELSQLITNSMHQLSMPHGYFTVDTHFDDNSLQIDGATKVEFNVTTNPGQPHQALSKVASGGELSRIALAIQVITAKKMDTPALIFDEVDVGISGPTAAIVGKLLRELGESTQVMCVTHLPQVAGCGHQHYFVNKETNGEETETTMKLLSKKERLQELARLLAGSEVTKNTLANAKDLLAA
>NZ_CP047340.1|WP_083629114.1|726328_727228_-|NAD(+)-kinase
MPDNTVTEEKHFKCIGIVGHPRHPEAISTHEMLYHWLLAQGYDVIIDTQVAQELKLENAQTGDLTQVGKVADLVIVVGGDGNMLGAARVLSRYNIKVIGVNRGNLGFLTDLDPDNALQQLTNVLAGHYREEKRFLLEARVCAEGQRTRIGTAINEVVLHPGKVAHMIEFEVYIDDRFAFSQRSDGLIIATPTGSTAYSLSAGGPILTPNLDAIALVPMFPHTLSARPLVISSDSQIRLKFSQTNIDYEVSCDSQLVLPIKEGDEVIIKRSRQKLNLVHPTDYNYFNTLSSKLGWSKKMF
>NZ_CP047340.1|WP_075673658.1|727328_727940_+|nucleotide-exchange-factor-GrpE
MSSKEQNVHEEQVSKEKEGMGSVMDESQEQVMTEETTADFNAQAELVEALARIDSLEKQLEQSQKTEREAMARALAEVENVRRRTQQDIEKAHKFALEKFSNELLPVLDNLERALSAADHENETMKPMIEGLELTLKSFLDAVRKFGIEVVEEKNVVFNPEVHQAMTLIDSPEHESNHVVDVMQKGYTLNGRLLRPAMVIVSK
>NZ_CP047340.1|WP_075673659.1|728057_728738_-|uracil-DNA-glycosylase
MTTPLTWHDVIGAEKEKPYFHQIMSQVAQQRAAGKIVYPPQEDIFNAFRFTPFDNVNVVILGQDPYHGPNQAHGLSFSVRPGVPAPPSLVNMYKELEKEYPDFKRPNHGYLESWAKQGVLLLNTVLTVEKGQAHSHANYGWEIFTDAVIEQINQRRDGVIFLLWGAHAQKKGRFIDTNKHVILKAPHPSPLSAHRGFLGCGHFKQANDILQQQGRTPINWHLDPIE

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Crispr_ID: NZ_CP047340_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047340_4

818288-818440

Orphan

Consensus_repeat	Method
TGACCTCTTGCATGCCATGCAAGCGCTCTCCCAACTGAGCTATAACCCCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP047340_4

>merge|NZ_CP047340|4|818288-818440|CRISPRCasFinder
TGACCTCTTGCATGCCATGCAAGCGCTCTCCCAACTGAGCTATAACCCCACATATTGGATTGTTCTAGAAGTATATTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAACTGAGCTATAGCCCCA

>NZ_CP047340|4|4|818288-818440|CRISPRCasFinder
TGACCTCTTGCATGCCATGCAAGCGCTCTCCCAACTGAGCTATAACCCCA	CATATTGGATTGTTCTAGAAGTATATTGGTGGAGCTAAGCGGGATCGAACCGC
TGACCTCTTGCATGCCATGCAAGCGCTCTCCCAACTGAGCTATAGCCCCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047340.1\|WP_156733745.1\|812991_815019_+\|NAD-dependent-DNA-ligase-LigA	unknown	unknown	gnl\|CDD\|236137
NZ_CP047340.1\|WP_075670522.1\|810913_811684_-\|sulfate-transporter-CysZ	unknown	unknown	gnl\|CDD\|179898
NZ_CP047340.1\|WP_075670694.1\|817440_818193_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|235546
NZ_CP047340.1\|WP_075670528.1\|815247_816432_+\|NupC/NupG-family-nucleoside-CNT-transporter	unknown	unknown	gnl\|CDD\|224883
NZ_CP047340.1\|WP_075670540.1\|827645_828425_-\|thiosulfate-reductase-cytochrome-B-subunit	unknown	unknown	gnl\|CDD\|184968
NZ_CP047340.1\|WP_075670534.1\|823275_823578_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP047340.1\|WP_075670546.1\|833075_833852_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380379
NZ_CP047340.1\|WP_156734459.1\|825233_827363_-\|TonB-dependent-siderophore-receptor	unknown	unknown	gnl\|CDD\|273805
NZ_CP047340.1\|WP_075670544.1\|832167_832971_-\|sulfite-exporter-TauE/SafE-family-protein	unknown	unknown	gnl\|CDD\|376667
NZ_CP047340.1\|WP_006533407.1\|808491_808749_-\|phosphocarrier-protein-Hpr	unknown	unknown	gnl\|CDD\|182777
NZ_CP047340.1\|WP_075670518.1\|809080_810034_-\|cysteine-synthase-A	unknown	unknown	gnl\|CDD\|273465
NZ_CP047340.1\|WP_075670530.1\|816816_817257_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP047340.1\|WP_023581656.1\|816598_816814_+\|DUF3820-family-protein	unknown	unknown	gnl\|CDD\|378970
NZ_CP047340.1\|WP_075670520.1\|810269_810800_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047340.1\|WP_075670532.1\|818596_820015_-\|glutamate--tRNA-ligase	unknown	unknown	gnl\|CDD\|234953
NZ_CP047340.1\|WP_156733746.1\|811907_812936_+\|cell-division-protein-ZipA	unknown	unknown	gnl\|CDD\|235124
NZ_CP047340.1\|WP_156733739.1\|829014_831294_-\|thiosulfate-reductase-PhsA	unknown	unknown	gnl\|CDD\|237973
NZ_CP047340.1\|WP_156733743.1\|824174_825221_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|238562
NZ_CP047340.1\|WP_109419083.1\|834517_834721_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371128
NZ_CP047340.1\|WP_156733741.1\|828421_829000_-\|4Fe-4S-dicluster-domain-containing-protein	unknown	unknown	gnl\|CDD\|274451

Protein	Function_ID	Function_description	E-value
NZ_CP047340.1\|WP_156733745.1\|812991_815019_+\|NAD-dependent-DNA-ligase-LigA	gnl\|CDD\|236137	PRK07956, ligA, NAD-dependent DNA ligase LigA; Validated.	0
NZ_CP047340.1\|WP_075670522.1\|810913_811684_-\|sulfate-transporter-CysZ	gnl\|CDD\|179898	PRK04949, PRK04949, putative sulfate transport protein CysZ; Validated.	5.09614e-144
NZ_CP047340.1\|WP_075670694.1\|817440_818193_+\|SDR-family-oxidoreductase	gnl\|CDD\|235546	PRK05653, fabG, 3-oxoacyl-ACP reductase FabG.	8.02224e-79
NZ_CP047340.1\|WP_075670528.1\|815247_816432_+\|NupC/NupG-family-nucleoside-CNT-transporter	gnl\|CDD\|224883	COG1972, NupC, Nucleoside permease [Nucleotide transport and metabolism].	1.45849e-148
NZ_CP047340.1\|WP_075670540.1\|827645_828425_-\|thiosulfate-reductase-cytochrome-B-subunit	gnl\|CDD\|184968	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional.	3.39919e-142
NZ_CP047340.1\|WP_075670534.1\|823275_823578_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	1.95221e-11
NZ_CP047340.1\|WP_075670546.1\|833075_833852_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|380379	cd06124, cupin_NimR-like_N, AraC/XylS family transcriptional regulators similar to NimR, N-terminal cupin domain. This family contains mostly bacterial proteins containing an AraC/XylS family helix-turn-helix (HTH) DNA-binding domain C-terminal to a cupin domain, and may be possible transcriptional regulators. Included in this family is Escherichia coli HTH-type transcriptional regulator NimR (also called YeaM) that negatively regulates expression of the nimT operon and its own expression. Proteins in this family belong to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold capable of homodimerization.	2.21656e-29
NZ_CP047340.1\|WP_156734459.1\|825233_827363_-\|TonB-dependent-siderophore-receptor	gnl\|CDD\|273805	TIGR01783, Ferrienterobactin_receptor, TonB-dependent siderophore receptor. This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins].	1.43509e-78
NZ_CP047340.1\|WP_075670544.1\|832167_832971_-\|sulfite-exporter-TauE/SafE-family-protein	gnl\|CDD\|376667	pfam01925, TauE, Sulfite exporter TauE/SafE. This is a family of integral membrane proteins where the alignment appears to contain two duplicated modules of three transmembrane helices. The proteins are involved in the transport of anions across the cytoplasmic membrane during taurine metabolism as an exporter of sulfoacetate. This family used to be known as DUF81.	1.42606e-20
NZ_CP047340.1\|WP_006533407.1\|808491_808749_-\|phosphocarrier-protein-Hpr	gnl\|CDD\|182777	PRK10850, PRK10850, phosphocarrier protein Hpr.	1.73301e-41
NZ_CP047340.1\|WP_075670518.1\|809080_810034_-\|cysteine-synthase-A	gnl\|CDD\|273465	TIGR01139, Cysteine_synthase, cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate. [Amino acid biosynthesis, Serine family].	1.24499e-173
NZ_CP047340.1\|WP_075670530.1\|816816_817257_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	4.66637e-15
NZ_CP047340.1\|WP_023581656.1\|816598_816814_+\|DUF3820-family-protein	gnl\|CDD\|378970	pfam12843, QSregVF_b, Putative quorum-sensing-regulated virulence factor. QSregVF_b is a family of short Pseudomonas proteins that are potential virulence factors. The structure of UniProtKB:Q9HY15 a secreted protein has been solved and deposited as Structure 3npd, from pfam13652. It is predicted that these two adjacent proteins form a single transcriptional unit based on the prediction that together they interact with their adjacent protein PotD, which is the putrescine-binding periplasmic protein in the polyamine uptake system comprising PotABCD. These two adjacent proteins are predicted to be quroum-sensing-regulated virulence factors.	1.01036e-33
NZ_CP047340.1\|WP_075670532.1\|818596_820015_-\|glutamate--tRNA-ligase	gnl\|CDD\|234953	PRK01406, gltX, glutamyl-tRNA synthetase; Reviewed.	0
NZ_CP047340.1\|WP_156733746.1\|811907_812936_+\|cell-division-protein-ZipA	gnl\|CDD\|235124	PRK03427, PRK03427, cell division protein ZipA; Provisional.	2.94871e-138
NZ_CP047340.1\|WP_156733739.1\|829014_831294_-\|thiosulfate-reductase-PhsA	gnl\|CDD\|237973	PRK15488, PRK15488, thiosulfate reductase PhsA; Provisional.	0
NZ_CP047340.1\|WP_156733743.1\|824174_825221_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|238562	cd01142, TroA_e, Periplasmic binding protein TroA_e. These proteins are predicted to function as initial receptors in the ABC metal ion uptake in eubacteria and archaea. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind their ligands in the cleft between these domains.	1.48451e-75
NZ_CP047340.1\|WP_109419083.1\|834517_834721_+\|hypothetical-protein	gnl\|CDD\|371128	pfam10547, P22_AR_N, P22_AR N-terminal domain. This domain was identified by Iyer and colleagues.	3.25464e-07
NZ_CP047340.1\|WP_156733741.1\|828421_829000_-\|4Fe-4S-dicluster-domain-containing-protein	gnl\|CDD\|274451	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein. Members of this protein family are the Fe-S protein, NrfC, of a cytochrome c nitrite reductase system for which the pentaheme cytochrome c protein, NrfB (family TIGR03146) is an unambiguous marker. Members of this protein family show similarity to other ferredoxin-like proteins, including a subunit of a polysulfide reductase. [Energy metabolism, Electron transport].	1.25483e-75

>NZ_CP047340.1|WP_075670694.1|817440_818193_+|SDR-family-oxidoreductase
MDYFKDKVILVTGASTGVGEGIAQLLFQRGATVFITGRHLEEITKTARSIDITGKKVIALQADMTSFSQVEKMIETIIAQVGALHGLVNNAGITGPHNTSIVDYEIEDWKAVIDTDINGVFYGMKYGIPAILKSGGGSIVNLSSSNGIVGIAGISAYTAAKHAVLGITRSAALEFADKGIRINAIGPGYVDTPKMQMLPNEVREWMANTHPMKRMATREEVAKTVAFLLSDESSFSTGAFYAIDGGYTAQ
>NZ_CP047340.1|WP_075670530.1|816816_817257_-|MarR-family-transcriptional-regulator
MEKCKLENALSLLQCTLVAQRTRYTPEQVTWGQYDILELLRLRGDLTPSQLSDSLAISRQNLSKFMRGLKSLGFIAQYRSEKDKRELITHLTDEGHAFLARAALGRKQNAEKISECLTLGEQTLFIELSQKIINALTPGKSAMDNN
>NZ_CP047340.1|WP_023581656.1|816598_816814_+|DUF3820-family-protein
MLEKQHLIDIANTQMPFGKYKGRMLVDLPEEYLLWFAKKGEFPEGKLGQLMEMTLAIKIEGLEGLLKPLKR
>NZ_CP047340.1|WP_075670528.1|815247_816432_+|NupC/NupG-family-nucleoside-CNT-transporter
MSSIIHFVLALAVIGALAFVASNNRKGIRLRYIVQLLVIEIALAWFFLNSDVGEGFVRGFAGLFDHLLGYAAQGTEFVFGGMMKGGLAFFFLNVLCPIIFISALIGILQHIKVLPFVIRIIGTVLSKVNGMGKLESFNAVSSLVLGQSENFIAYKDVLSKMSQRRMYTMAATAMSTVSMSIVGAYMTMLDPKYVVAALVLNMFSTFIVLSVINPYSVENEEEIQMGNLHEGQSFFEMLGEYILAGFKVALIVAAMLIGFIALIAAVNAIFSMIFGISFQDCLGYVFYPLAWVIGVPEQDALRVGSVMATKLVSNEFVAMGSLQDIAAEISPRSVGILSVFLVSFANFSSIGIVAGAIKGLNEVQGNVVSRFGLKLLFGSTLVSFLSAAIAGLFV
>NZ_CP047340.1|WP_156733745.1|812991_815019_+|NAD-dependent-DNA-ligase-LigA
MNKNTQQKIDKLRVTLRHHEYLYHVMDAPEIPDAEYDRLMNELKALEAEHPELITSDSPTQRVGALPLTAFEQVRHEIPMLSLDNAFDETSYLAFDKRLRDRLKNSEEITFCCELKLDGLAVSLLYENGVLVQAATRGDGTTGENITENVRTIKAIPLRLYGEDIPARIEIRGEVFMNEKGFEYLNEEARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPTSHYERLQQFKKWGLPVSDAVKLCSGSKAVLDFYHHVEEIRSNLGFDIDGVVIKVDDIALQEELGFVSRAPRWAIAYKFQAQEQMTIIKDVEFQVGRTGAITPVARLEPVQVAGVVVSNATLHNADEIERLGIRIGDTVVIRRAGDVIPQVVSVIEEKRPDDAQEIIFPTHCPICDSDVERIEGEAVARCTGGLICGAQRKEALKHFVSRRAMDVDGMGDKIIDQLVEKEYVKTPADLFRLDEKILSGLERMGEKSAKKLITALDKAKSTTFARFIYALGIREVGEATASGLTTHFSTLDALRNADVEALKSVPDVGDVVAKHVVNFFQEEHNRTVIEQLINDAGITWQAPVIVTHEAGDNPFAGKTVVLTGSLSQLTRDEAKDRLAALGAKVSGSVSKKTDMVIAGEAAGSKLVKANELGIAIIDEDEMIRLLDQSK
>NZ_CP047340.1|WP_156733746.1|811907_812936_+|cell-division-protein-ZipA
MMQQNLRLILIVVGAILIIALLLHGLWIGRKERSKLFRNRPVKRQKQNYQSDENDDEPQYAEASHQTSTLSSTEKRESEPPIKSEPLHEPEISVADRDPLMSETQTKGSSHDTSLQQEPSLGVFDVIEKESVPIVRDEPKQEPVVNVASEIKSHVNTVSPSASFEPSISETTAHVTPVETEASHHALAEEPIAESAPQATEAEKELVIVLNVSAHHGQMLDGEVLMQSIIQAGFQFGEMNIFHRHLNPTANGPVLFSLANMVKPGTFNIDTMAELTTPGVSMFMMVPSYGDANQNFKLMLLTAQRIASDVGGVVLDDERKLLTPQKIELYKSRIRRTLDLNQ
>NZ_CP047340.1|WP_075670522.1|810913_811684_-|sulfate-transporter-CysZ
MTNLTETNKNLNGFHYFALGWRLITRKGLKRFVILPLLANIIILGSAFWWLYGQIGGMVNWMMEKVPDWLQWLSYLIWPLSVIFILLVFTYFFSTLANIIASPFNGLLAEKLEGQITGIAPPDTGVAGILKDVPRILKRELTKIAYYLPRAIVLLLLYFIPAIGQTVAPILWFAFGAWMMAIQYNDFPFDNHKISFAAMKSSLKQDKWNNLQFGMVINIFTMIPILNLVIMPVAICGATAMWCDRYRKQHVQNGQW
>NZ_CP047340.1|WP_075670520.1|810269_810800_+|hypothetical-protein
METIEELISALELAVPELDAQVLRENLPESDAQEDVLNWLYESLSAQGLMDYVEWTEYFGDIPDLKSLEHISFPESPSALILSQVENIDWDEVSVDPYMLPYELPYLEYINHFLTEKGLRLVDLTPFENAYIFCIRDDEEIMEKLDGALNIFEMGINEREPMDKEETKDYIRSLIE
>NZ_CP047340.1|WP_075670518.1|809080_810034_-|cysteine-synthase-A
MSKIFEDNSQTIGHTPLIRLKHFGNGNILAKVESRNPSFSVKCRIGANMIWDAEKKGILKEGVELVEPTSGNTGIALAYVAAARGYKLTLTMPDTMSVERRKLLKALGANLVLTEGAKGMKGAIDKANEIRESDPKRYLLLQQFSNPANPEIHEKTTGPEIWNDTDGEVAAVIAGVGTGGTITGIGRYLKKTQGKAVTMVAVEPTGSPVITQALAGEEIKPGPHKIQGIGAGFIPENLDLSLLDRVIQITNEEAFDTARELMTKEGILAGISSGAAIAAAVKLAKEPEFANKEIVVILPSSGERYLSTPLFADISDS
>NZ_CP047340.1|WP_006533407.1|808491_808749_-|phosphocarrier-protein-Hpr
MYQQEVTITAPNGLHTRPAAQFVKEAKTFSSDITLISSGKSASAKSLFKLQTLGLTQGTVVTISAEGEDEKQAVEALVKLMAELE
>NZ_CP047340.1|WP_075670532.1|818596_820015_-|glutamate--tRNA-ligase
MSKIKTRFAPSPTGYLHVGGARTALYSWLYSRHNKGEFVLRIEDTDLERSTQPAIDAIMDGMNWLNLNWDEGPYYQTKRFDRYNQVIDQMLSAGTAYRCYCTKERLEQLREDQMAKGEKPRYDGCCRGGNHNHSADEPHVVRFLNPQEGSVIFDDKIRGPIEFSNQELDDLIIRRTDGSPTYNFCVVIDDWDMEITHVIRGEDHINNTPRQINILKALGAPVPEYAHVSMILGDDGKKLSKRYNAVSVMQYRDEGYLPEALLNYLVRLGWSHGDQEIFTIDEMIEHFTLEAISKSASAFNTDKLLWLNHHYINTLPAEKVAVHLDWHIKQQNIDTSNGPSLVELIKLLGERCKTLKEMAESCHYFYVDFDTFEETAAKKHLRPVARQPLEVVRDKLSAITEWTAENVHQAIQDTADELEVGMGKVGMPLRVAVTGAGQSPGLDVTVHAIGKTRSVARINKALDFITERENQA
>NZ_CP047340.1|WP_075670534.1|823275_823578_+|helix-turn-helix-transcriptional-regulator
MSSKYPVAYAVGQKIKSLRKSQGYTVFQLAKEIDISEQQLFRYERGVNRIDIDCLVRVLEVLGVNIGSFFEEVTGGMAQESEHNEQHIPAHFDSKALSIF
>NZ_CP047340.1|WP_156733743.1|824174_825221_-|ABC-transporter-substrate-binding-protein
MYKVFFKILCIALLGASALSISFNVQAQRVVQYYQNQTITIPDSPERVATSWNAQNAILAMLGAGDKIVSTTDLVKTIPFFTEIVPAIKTASISSKGNNDTLNIETLIVSQPQIFFATGKLSDAQMTALKNAGISVALLKSGSMDALLERTLITGEILGSSSHQLANDYLAYFQRNEALVKSAVSEISTNKPMKVYHAFGSPLRTSGAPSLNHDWITLAGGINVAEHWFDNVPSRAGDVSLEQVIHANPDVIVTMYARDTEIIKNAPEWQSISAVREGRVYTNPKGLFWWCRETTEEALQFLWLATVLYPEQTKHINISKETQQFYKTFFNITLTDQQLKHILKPLKD
>NZ_CP047340.1|WP_156734459.1|825233_827363_-|TonB-dependent-siderophore-receptor
MISTIACAIAQTLAVSASVAAENAEKIVVTVQPVNNSEAGAGFVTREVDMGPLGEKKWLDTPYTTNTFTQSMIENQQVTNVADILKYNASSQMQARGGMDVGRPQNRGMQGNVVANSRLDGVNIISTTAFPIEMLDRVDIINGLTGSLYGPASPSGQFNFTQKRPTLKRLTSLNATYVSDNQFKGHLDLGGFIDDNNTFGYRINLMHDEGKGYVAGSKTRRQLISTAFDWNISSDTVLEVNFSDYWFKKIGYPGAFSYGPKVTALPDAPDPTKAGYGQAFAGVDLHTRTVSSRLKHDFNEDWQISAAIGYQTADRGFRSVSNQLSHDGKQFTPTLSVPTTYGRFTILSHSVNVNGHVMTGALSHDLILATSGYRWDIYGANGNDQKFTLPTQDINNPHRYDDPSHEGFYTGAARTKNSRSQVQSFTLGDTVTFNPQWSVMGSLSQNWIKETSYRAGGGNHTENGLSPTVALMFKPIPEVMTYVSYADSLEEGDSAPNTANNKNEVLKPYRSEQWEMGVKSQIGDLNLNAAIFQLERPFAYVGNDNIFKEQGKQRNRGLELIANGKVTDELFVFSSMTWLDPTLTNTGNAQTQDKDVVGVPKYQANLLAEYHYPTLPNVIYSANVHYTGKRAANTTNTMWAKAYTTLDLGARYQTQYWDKKTTFRLNLDNVTNEHYWASIFSGNQNGAIGGANAFLGTPRQVSASVSIEL
>NZ_CP047340.1|WP_075670540.1|827645_828425_-|thiosulfate-reductase-cytochrome-B-subunit
MTSIWGAELHYTPDYWPVWLMAAGLLIVAMIAVLVIHGLLRYALAPKHSGHYEEERVYLYSKAIRFWHWGNALLFILLLLSGFLGHFSIGNVTSMVLLHKICGFVLIAFWIGFILINLTTSNGVHYKVRFSGLIGRCIKQARFYLYGIMKGEPHPFAATETDKFNPLQQLAYLGVMFGLVPLLLVTGLLCLYPEVLGEGYWMLKAHLVLGIVALMFICAHFYLCTLGDTFTQTFRSMIDGHHRHQKHDDHSSVTEKTEH
>NZ_CP047340.1|WP_156733741.1|828421_829000_-|4Fe-4S-dicluster-domain-containing-protein
MNNNDKQFVMLHDEKRCIGCQACTVACKVINDIPEGFSRLQVQIQGPHDDEAGNPHYQFFRVSCQHCEDAPCVSVCPTGASFIDENGIVQVKKELCIGCDYCVGACPYHVRYINPMTHIADKCNFCSDTRLAKGELPACVSVCPTDALAFGRIDSPEIQAWIKQKSVYQYQLDNVGKPSLFRRKEIHQGDKA
>NZ_CP047340.1|WP_156733739.1|829014_831294_-|thiosulfate-reductase-PhsA
MSISRRSFIKGMGIGCVGCTVSSLPPGALAFNPVDSLKGQSTLTPSLCEMCSYRCPIEAQVVNNKTVFIQGNRNAEHQSSRVCARGGSGVSLVNDPNRIVKPMKHKGPRGAGKWEVISWEQAYKEIAEKMNAIKQNYGAESISFSSKSGSLSSHLFHLAAAFGSPNTFTHASTCPAGKAIAASVMMGGDLKMDLANSKYILSFGHNLYEGIEVAETHELMTAQERGAKLVSFDPRLSVVSSKADEWFAIRPGGDLPVLMAMCHILIKEDLYDKAFIEKFTIGFPQLKEVLQDTTPEWAQAHSDVPAKDIVRIAREIAAKAPHALIMPGHRATFNKEEINMRRMIFTFNALLGNIEREGGMYQKKAATKYNKLAGIDVAPELAKPSVKGMPEITAKRIDATAPQFKYINKGGGIVQSIIDSTLEGVPYQTRAWIMSRHNPFQTVSCRPDLEKAAQKLDLIVSCDVYLSESAAYADYLLPECTYLERDEEVADVSGLNPAYALRQQVVEPIGDTKPSWLIWMELGKALGLEACFPWENMGVRQLYQVNGSEELYKEMHKKGYISYGIPLLLREPSYVKAFVEQYPDAIKHVDSNNTMEKALSFKSPSGLIEIYSEELESRLENYGIPRFHNFPLKEKDELYFIQGKVAVHTNGATQYVPLLAELMWENPVWLHPETAKNHGIKHGDEIILENNIGKEKAHALITEGIRPDTVFVYMGSGAKAGARTAATTTGVHCGNLLPHEISPVSGTDVHTSGVRISRA
>NZ_CP047340.1|WP_075670544.1|832167_832971_-|sulfite-exporter-TauE/SafE-family-protein
MTLWLISFGLISGITTWLFGFGGGFVTVPLLYTLILTLWGIDSLPAEHAMQIAVATSALIMLFSATVTTIKHHKAKRLDWNIMSILFMGIAFGGILGALLALTVEGTWIKWIFIGYLFITILDCYFRPGFMAPTHNSKTVTKAKESINGTVIGIIAAFLGVGGSVMTVPLLRRRGTPMAQSAAMANALTLPLALTATFTYVALSFTSPLNSESGFIGYIWLKAALILICSTWVGLKISERFLSRIPDKWHARVYPLLLSLVLIVMLF
>NZ_CP047340.1|WP_075670546.1|833075_833852_+|AraC-family-transcriptional-regulator
MRNIDINSVDDLPRDILALGSDYPYDTLLEAHHHRRAQFLYAPSGVMKVKTEDGQWIVLPYSGVWIPAEKVHQVLMLGSSTYSLYIEPNKIPRHSEYCEVLQVSPLLHQLLLSANELPLLYDLGGRDSALLTLLCHELSQAKPLPYFTPLPQHALLDELCTEFMSRPNIRTTPEMWAEKLNKSLRTFTRLFHKETGLSFRDWRQKACLMYALTALKKGDSVTEVALELGYENPSAFSAMFNKEMGYSPKLFLKRLKEF
>NZ_CP047340.1|WP_109419083.1|834517_834721_+|hypothetical-protein
MNMVVIDKELRNILCMALKKLNGWLLRINSSKVKEGIRNYSDYSRNQTIVLQLLLNILCLYTVIVCS

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Crispr_ID: NZ_CP047340_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047340_5

2368557-2368647

Orphan

Consensus_repeat	Method
AAGTATGTGACTAGTGCGAATGAAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP047340_5

>merge|NZ_CP047340|5|2368557-2368647|CRISPRCasFinder
AAGTATGTGACTAGTGCGAATGAACGCCGTCAACAACGCTGTGGCTTGAAGTATGACGAGTATCATAAGTATGTGGCTAGTGCGAATGAAC

>NZ_CP047340|5|5|2368557-2368647|CRISPRCasFinder
AAGTATGTGACTAGTGCGAATGAAC	GCCGTCAACAACGCTGTGGCTTGAAGTATGACGAGTATCAT
AAGTATGTGGCTAGTGCGAATGAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047340.1\|WP_075672736.1\|2369051_2369843_+\|molybdenum-dependent-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182640
NZ_CP047340.1\|WP_098943836.1\|2361262_2362300_-\|biotin-synthase-BioB	unknown	unknown	gnl\|CDD\|185063
NZ_CP047340.1\|WP_156733115.1\|2372357_2377742_-\|filamentous-hemagglutinin-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|377410
NZ_CP047340.1\|WP_156733119.1\|2363754_2364744_-\|6-phosphogluconolactonase	unknown	unknown	gnl\|CDD\|182912
NZ_CP047340.1\|WP_075672732.1\|2382175_2383234_-\|3-deoxy-7-phosphoheptulonate-synthase-AroG	unknown	unknown	gnl\|CDD\|236435
NZ_CP047340.1\|WP_156733120.1\|2362403_2363678_+\|adenosylmethionine--8-amino-7-oxononanoate-transaminase	unknown	unknown	gnl\|CDD\|181189
NZ_CP047340.1\|WP_156733123.1\|2358684_2359368_-\|ATP-dependent-dethiobiotin-synthetase-BioD	unknown	unknown	gnl\|CDD\|234625
NZ_CP047340.1\|WP_156733116.1\|2370498_2370684_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|259837
NZ_CP047340.1\|WP_075672737.1\|2367565_2368336_-\|molybdate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|182641
NZ_CP047340.1\|WP_071788544.1\|2368748_2368892_-\|multidrug-efflux-pump-associated-protein,-AcrZ-family	unknown	unknown	gnl\|CDD\|371231
NZ_CP047340.1\|WP_156733118.1\|2364893_2365715_+\|pyridoxal-phosphatase	unknown	unknown	gnl\|CDD\|182523
NZ_CP047340.1\|WP_075672739.1\|2365797_2366862_-\|molybdenum-ABC-transporter-ATP-binding-protein-ModC	unknown	unknown	gnl\|CDD\|182993
NZ_CP047340.1\|WP_036938379.1\|2381348_2382101_+\|2,3-diphosphoglycerate-dependent-phosphoglycerate-mutase	unknown	unknown	gnl\|CDD\|184516
NZ_CP047340.1\|WP_156733122.1\|2359360_2360125_-\|malonyl-ACP-O-methyltransferase-BioC	unknown	unknown	gnl\|CDD\|182340
NZ_CP047340.1\|WP_156733114.1\|2377757_2379299_-\|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein	unknown	unknown	gnl\|CDD\|225387
NZ_CP047340.1\|WP_156733117.1\|2369988_2370495_-\|CdiI-family-contact-dependent-growth-inhibition-immunity-protein	unknown	unknown	gnl\|CDD\|259838
NZ_CP047340.1\|WP_156733121.1\|2360099_2361263_-\|8-amino-7-oxononanoate-synthase	unknown	unknown	gnl\|CDD\|235655
NZ_CP047340.1\|WP_075672738.1\|2366855_2367548_-\|molybdate-ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|181841
NZ_CP047340.1\|WP_156733113.1\|2379492_2380959_+\|molybdate-ABC-transporter-ATP-binding-protein-ModF	unknown	unknown	gnl\|CDD\|182852
NZ_CP047340.1\|WP_069369151.1\|2372028_2372361_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP047340.1\|WP_075672736.1\|2369051_2369843_+\|molybdenum-dependent-transcriptional-regulator	gnl\|CDD\|182640	PRK10676, PRK10676, DNA-binding transcriptional regulator ModE; Provisional.	3.76459e-177
NZ_CP047340.1\|WP_098943836.1\|2361262_2362300_-\|biotin-synthase-BioB	gnl\|CDD\|185063	PRK15108, PRK15108, biotin synthase; Provisional.	0
NZ_CP047340.1\|WP_156733115.1\|2372357_2377742_-\|filamentous-hemagglutinin-N-terminal-domain-containing-protein	gnl\|CDD\|377410	pfam04830, DUF637, Possible hemagglutinin (DUF637). This family represents a conserved region found in a bacterial protein which may be a hemagglutinin or hemolysin.	8.65959e-51
NZ_CP047340.1\|WP_156733119.1\|2363754_2364744_-\|6-phosphogluconolactonase	gnl\|CDD\|182912	PRK11028, PRK11028, 6-phosphogluconolactonase; Provisional.	1.18456e-175
NZ_CP047340.1\|WP_075672732.1\|2382175_2383234_-\|3-deoxy-7-phosphoheptulonate-synthase-AroG	gnl\|CDD\|236435	PRK09261, PRK09261, phospho-2-dehydro-3-deoxyheptonate aldolase; Validated.	0
NZ_CP047340.1\|WP_156733120.1\|2362403_2363678_+\|adenosylmethionine--8-amino-7-oxononanoate-transaminase	gnl\|CDD\|181189	PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated.	0
NZ_CP047340.1\|WP_156733123.1\|2358684_2359368_-\|ATP-dependent-dethiobiotin-synthetase-BioD	gnl\|CDD\|234625	PRK00090, bioD, ATP-dependent dethiobiotin synthetase BioD.	7.82757e-109
NZ_CP047340.1\|WP_156733116.1\|2370498_2370684_-\|hypothetical-protein	gnl\|CDD\|259837	cd13444, CDI_toxin_EC869_like, Zn-dependent DNAse of the contact-dependent growth inhibition (CDI) system of Escherichia coli EC869, and related proteins. CDI toxins are expressed by gram-negative bacteria as part of a mechanism to inhibit the growth of neighboring bacteria. This model represents the C-terminal toxin domain of CdiA effector proteins. CdiA secretion is dependent on the outer membrane protein CdiB. Upon binding to a receptor on the surface of target bacteria, the CDI toxin is delivered. A wide variety of C-terminal toxin domains appear to exist; this particular example from Escherichia coli EC869 and other bacteria appears to function as a Zn2+-dependent DNAse degrading the genome of target cells.	1.9615e-15
NZ_CP047340.1\|WP_075672737.1\|2367565_2368336_-\|molybdate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|182641	PRK10677, modA, molybdate transporter periplasmic protein; Provisional.	1.18293e-179
NZ_CP047340.1\|WP_071788544.1\|2368748_2368892_-\|multidrug-efflux-pump-associated-protein,-AcrZ-family	gnl\|CDD\|371231	pfam10766, AcrZ, Multidrug efflux pump-associated protein AcrZ. AcrZ is associated with the AcrA-TolC multidrug efflux pump, it may enhance the ability of the pump to recognize and export certain substrates.	4.11027e-12
NZ_CP047340.1\|WP_156733118.1\|2364893_2365715_+\|pyridoxal-phosphatase	gnl\|CDD\|182523	PRK10530, PRK10530, pyridoxal phosphate (PLP) phosphatase; Provisional.	0
NZ_CP047340.1\|WP_075672739.1\|2365797_2366862_-\|molybdenum-ABC-transporter-ATP-binding-protein-ModC	gnl\|CDD\|182993	PRK11144, modC, molybdenum ABC transporter ATP-binding protein ModC.	0
NZ_CP047340.1\|WP_036938379.1\|2381348_2382101_+\|2,3-diphosphoglycerate-dependent-phosphoglycerate-mutase	gnl\|CDD\|184516	PRK14115, gpmA, 2,3-diphosphoglycerate-dependent phosphoglycerate mutase.	0
NZ_CP047340.1\|WP_156733122.1\|2359360_2360125_-\|malonyl-ACP-O-methyltransferase-BioC	gnl\|CDD\|182340	PRK10258, PRK10258, biotin biosynthesis protein BioC; Provisional.	4.90444e-70
NZ_CP047340.1\|WP_156733114.1\|2377757_2379299_-\|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein	gnl\|CDD\|225387	COG2831, FhaC, Hemolysin activation/secretion protein [Intracellular trafficking and secretion].	1.5289e-90
NZ_CP047340.1\|WP_156733117.1\|2369988_2370495_-\|CdiI-family-contact-dependent-growth-inhibition-immunity-protein	gnl\|CDD\|259838	cd13445, CDI_inhibitor_EC869_like, Inhibitor of the contact-dependent growth inhibition (CDI) system of Escherichia coli EC869, and related proteins. CDI toxins are expressed by gram-negative bacteria as part of a mechanism to inhibit the growth of neighboring bacteria. This model represents the inhibitor of the CdiA effector protein from Escherichia coli EC869 (which is a DNAse). CdiA secretion is dependent on the outer membrane protein CdiB. Upon binding to a receptor on the surface of target bacteria, the CDI toxin is delivered. The inhibitors are intracellular proteins that inactivate the toxin/effector protein. This domain is also known as DUF1436.	1.76096e-49
NZ_CP047340.1\|WP_156733121.1\|2360099_2361263_-\|8-amino-7-oxononanoate-synthase	gnl\|CDD\|235655	PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed.	0
NZ_CP047340.1\|WP_075672738.1\|2366855_2367548_-\|molybdate-ABC-transporter-permease-subunit	gnl\|CDD\|181841	PRK09421, modB, molybdate ABC transporter permease subunit.	9.80112e-149
NZ_CP047340.1\|WP_156733113.1\|2379492_2380959_+\|molybdate-ABC-transporter-ATP-binding-protein-ModF	gnl\|CDD\|182852	PRK10938, PRK10938, putative molybdenum transport ATP-binding protein ModF; Provisional.	0

>NZ_CP047340.1|WP_075672737.1|2367565_2368336_-|molybdate-ABC-transporter-substrate-binding-protein
MKKLSGKLLAGAVISFALVSQSFASEKVTVFAAASLTNALNEISAQYKQEKQTEVVASYASSSTLARQIEQGAPANLFISADQQWMDYAIDKNLMVADSRHTLLGNDLVLIAPKDSKLNDVVINKETKWKSLLNGGKLAVGDPDHVPVGIYAKESLEYLGAWDTVSPDMARTNNVRSGMALVERDEAPLGIVYGSDAVASDKVKVVGVFPADSHKPVEYPMAVVKGQDNKAVRDFYDYLKTPQAAEIFKKYGFSPL
>NZ_CP047340.1|WP_075672738.1|2366855_2367548_-|molybdate-ABC-transporter-permease-subunit
MLSEYEWQAIILSLKVSTIAVIISLPFGIFMAWLLVRVRFPGKSLLDSIIHLPLVLPPVVVGYLLLISMGRRGFIGEWLYDWFGFSFTFSWRGAALASAVVAFPLMVRAIRLALEAVDQRMEQAARTLGASPIRVFFTITLPLSMPGIIAGIVLAFARSLGEFGATITFVSNIPGETRTIPLAMYTLIETPGAEMDAARLCVIAIILALVSLMASEWLTRWGRKRLGGVC
>NZ_CP047340.1|WP_075672739.1|2365797_2366862_-|molybdenum-ABC-transporter-ATP-binding-protein-ModC
MLEMNFKQTLGSLRLEVNTELPTESITAVFGLSGAGKTSLINVIGGLTKPDSGRIVLNNHTLVDTEKKIYLPPEKRKVGYVFQDARLFPHYTVKGNLLYGMSPTMKVQFDRIIHLLGIEHLLPRFPITLSGGEKQRVAIGRALLTAPDIMLMDEPLASLDLPRKRELLPYLEKLSQDVQIPILYVSHSLDEIIRLADNVIVMDAGKIKATGKLEDVWASSALRPWLQKETLSSIANVMVVEHHSHYDMTATAFGNQVLWLPQIEAKIGRDVRVRIDASDVSLTTTRPSNSSIRNILHMKVVETIKNDGQVDVKLVNDGNYLWARITPWAKDELNIQEGQWLYAQIKSISLSRHL
>NZ_CP047340.1|WP_156733118.1|2364893_2365715_+|pyridoxal-phosphatase
MSYRVIALDLDGTLLDDQKRILPESLEALNLARKAGVKVLIVTGRHHVAIHPFYQALDLDTPAICCNGTYLYDYIGKKVLESDPLTTQETRAVLDLVKQTDVHHLVYADDAMMYDQLTSAVQRTLNWSDTLPLTQRPNLVKVDDFYKAMHDVNAIWKIATTTPDHDELRTLVEKIEQQVGLECEWSWVDQVDIAKKGNSKGRRLQRWVEANGMNMNDVIAFGDNFNDLSMLEHVGLGVAMGNASDEVKARAKMVTKVNSQPGIAETIHKYILS
>NZ_CP047340.1|WP_156733119.1|2363754_2364744_-|6-phosphogluconolactonase
MKQVVYVASPESQQIHVYALNTEGEMDLLQVVEVAGQVQPMIASADGKYLYVGIRPHFSVVTFAIADDGQLEQKAITSIPSTPVHLCLDKTERFLFVPSYHQGNLAVLPINEKGIPQSAIQIIEGLNKPHSSNIDWNNKQLIVPCLGEDHIRLFNLSEKGYLTEAGTEELTTAQNAGPRHMAFHPNGDVFYCLNELDATINVYRRMGDLYRLMQTVDIVPETFNSTRWASDIHITPDGRFLYASERSESFICAMAISESGDYLQPVGYYPTQTQPRGFNLDNTGNYLISCGQKSDFASVSRIDKHTGALTELACYPVGKGAMWVTVVTK
>NZ_CP047340.1|WP_156733120.1|2362403_2363678_+|adenosylmethionine--8-amino-7-oxononanoate-transaminase
MTPEDIAFDLRHIWHPYTSMSDPLPAYPIVSAKGVELVLADGRKLIDGMSSWWAAIHGYNHPELNNAVTIQLSNMSHVMFGGITHPPAVSLCRKLLAITPDPLECIFLADSGSVAVEVALKMALQYWQAKGEKRQRIVALKQGYHGDTFGAMSVCDPDSSMHSLYKGYLPNHLFVDAPKTGFYEEWDPTDIHSLRSTLEQHHQEIAAVMLEPIVQGAGGMRIYHPEYLKQARALCDEFDVLLIADEIATGFGRTGKLFACEYAEISPDIMCVGKALTGGYMTLSATLTTRHIAETISQGDAGCFMHGPTYMGNPLACAVADASLSLLAKGDWINQVAEIEKQLKRELLPLKQAKSVKDVRVLGAIGVVEMNEPVNMAKLQKIFVDEGVWIRPFGKLIYIMPPFIMPPVSLTKLTQAIEKVVSLS
>NZ_CP047340.1|WP_098943836.1|2361262_2362300_-|biotin-synthase-BioB
MSALKRWTLKEARALFDMPFLDLVFQAQQVHRQHFDPSQIQVSTLLSIKTGACPEDCKYCAQSARYKTGLEKERLMEVQQVIESAKKAKAAGSTRFCMGAAWKNPHERDMPYLEQMVKEVKALGMETCMTLGKLDDSQANRLADAGLDFYNHNLDTSPEFYGSIVTTRTYQDRLDTLDKVRNAGIKVCSGGILGLGEEVKDRAAMLVQLANLPQPPESVPINMLAKIKGTPLADNEDVDPFDFIRTIAVARIMMPRSYVRLSAGREQMSEQTQAFCFMAGANSIFYGCKLLTTTNPTEDKDHQLFRKLGLNPERLAVSMGDNQQEEALIQAVANKDTEQFYNAAL
>NZ_CP047340.1|WP_156733121.1|2360099_2361263_-|8-amino-7-oxononanoate-synthase
MSWQTYLNEQLNVRRNTPLWRKRKVIKQADGRFLITTSGEKYLNFSGNDYLGISQHTDVIKAWQQGADEYGVGSGGSGHITGFTQAHAQLEQHLADWLGYDNALLFSSGYSANQGVISALLEKDDAIIADKLCHASLMEAAVLSPATLWRFLHNSPESLSQRLNKTSANKTLVVTEGVFSMDGDKAPLREIATISQKYHAWLMVDDAHGIGVLGKEGRGSCDDAGIKPEILVVTFGKAFGVSGAAVLCNKPTAEFFEQYARHLIYSTSMPPAQAIALNSALNVIKQADNEREYLQQLIDTFRQGVISLPIKLLPSKTAIQPLIIGDEQLCQTLSDYLQSKGLWVKAIFPPTVPPQSARLRITLTTRHHLSDIKLLIETLHAFFSQNR
>NZ_CP047340.1|WP_156733122.1|2359360_2360125_-|malonyl-ACP-O-methyltransferase-BioC
MLSSVKTDKQRIAQTFGKAAIHYDNHANIQRYSGNKLMDLAHHDSGNIVLDAGCGTGYFSQKWKQQGKFVIALDLSHSMLQVAKQQQRADGYLQSDIEQCAIAPQSVDIVFSNLAMQWCEDLSGAIKTLMNTVNVKGALYFSTLTTLTLQEVRDAWQSLDKHPHVNPFLSLQDIEKACRGFHCQFSTETVTEQYDSLRALFASLKGVGANFVQGDRQKGLMTRQKFRALENVWKTESGKYLLTYQIVIGKISHG
>NZ_CP047340.1|WP_156733123.1|2358684_2359368_-|ATP-dependent-dethiobiotin-synthetase-BioD
MAKTWFLTGTDTEVGKTVVSSALLQCAAYQGYQTAGYKPVASGSEWLNEGLRNSDALILQKFSTVKLDYQRVNPYCFETPTSPHIVSQEMNQPIDFDVMSEGLSYLKQRADWVLVEGAGGWFTPLSEKQFFSDWVINEKLPVILTVGVKLGCINHALLTQQAIIQSGLTLAGWIANEVEPAGRYQKEYLATLKQHIKAPFLGKIPYLNEVKEHNFTPYLDLSCLKLS
>NZ_CP047340.1|WP_071788544.1|2368748_2368892_-|multidrug-efflux-pump-associated-protein,-AcrZ-family
MLELLKSLGFALLMVPVVMVLIMGIIYGLGEVFNLISPSQPKADKKS
>NZ_CP047340.1|WP_075672736.1|2369051_2369843_+|molybdenum-dependent-transcriptional-regulator
MQAEILLTLKLQDKLFADPRRVALLKQIKATGSISQGAKMAGISYKSAWDAINEMNQLADELLVDRATGGKGGGGATLTHYCERLLQLYDLLGQIQQKAFDVLKDDSLPLDSLLAAISRFSLQTSARNQFFGTIIERDNLQVQQHVNVQLADRKTTIRAALTEKSADRLGLKKGKEVLILIKAPWVNIEKGTSLTQQYDNALSGTLTQIETGSENSELVVTLEGGQEVCATCSNQHVKEQKLHINDSVTALFNADQVIVATLC
>NZ_CP047340.1|WP_156733117.1|2369988_2370495_-|CdiI-family-contact-dependent-growth-inhibition-immunity-protein
MFKLKNNKLRASVYYNDAHYILLTFSGHSIYIMDLKKGYKVLPNDILDEELGCYAKLALIKSEQIKGSSDKFNQMYNDKKPYQDWIKKIIKEYDYKNKTALFNNMNRCSLELTDDEITISPQNHLRMDHWVGEGIPDSAIITLKSNCSDEVLGASIKEAFTRCISRKV
>NZ_CP047340.1|WP_156733116.1|2370498_2370684_-|hypothetical-protein
MDKYSGDGRGITEISKKDVKLKILELGVPEKTTKEQWDAINDSIKNASSKNIKVNITIIEE
>NZ_CP047340.1|WP_069369151.1|2372028_2372361_-|hypothetical-protein
MKLIGSRKEMIIKDRLIKNEGSILKNEKINCLLKNRFSNIISVYCLEHVLEEDYDLYTLLVNKDSIVEFELSRFNGEFKDINISSLDLYSKKIKDKKLRLKLLVAVNLPK
>NZ_CP047340.1|WP_156733115.1|2372357_2377742_-|filamentous-hemagglutinin-N-terminal-domain-containing-protein
MCEKDISWKQRLISYIIAYVIAIYPLHPAWSLAITPSDKTIKVNQQNTVPIINISTPNNLGISHNKFHSFNVSKQGVVLNNATTSVNTQLAKQVNANTHLKGSAAHLIINEVVGNGRSQLQGKLEVAGEQAKVVIANPNGITCDGCSFINTPAITLTTGKPLFNPQGAYSAIEVKKGGVVIGTQGIDLQTQDYADIISRSIELNGKINAKTLSLMQGNNRIDFDKGTVNSINGEGVKPTLSIDTKVLGGMYANQIRLVSTEKGVGVNLSNIQTNQNSVNLTVDGKITFNGNIQSDQDINVSSKELQINSNTKLKAKRDITLATNTLINHSEVISEKDMRLFADKLTNKNEKALIQAKDNLWIQRNAQGDPNTLIENQSATIKTEKGDLIIRTKKLVNESITPLFKEIKQEPDSKLSINIGNHLLLPSRSPTDDFLLVIAFPELKNFSYKKWFDILDLKNNGGVNVERSYFEKSNKYVPSIISSGNNLYIQSNDFINNQSRIIADNNLIATGSSARLYYYRSAYLNKWEHYSNDNAHLYYRDDIIKYKLDEAKFNKVSHFVPFVKTGSHYEFSVNDVSDYIIKAGNNLVLDFKNSIDLERKLPFTEKEIKKFRGLSDFENTILAKNILLNANNVNVSLNLTANDSLSIIADKSININNSKLLADENISLTAIDTIKFENIDVTAKYFSAITKKGNISHLFNPTTFYTLKGIKSPYVDIPEKIYFNSGKNIDISNVIINKSNELNLSALEDIKINRDESFLFNLVPFIRDSGYIPAFLINMGVLESNNITFTSGKDIISQGIKYHSDKEITFNAGQDIFLASKSIKEADPFFSDIYYLQLQSKLFSDDNLILNAARDVDLSSTVLNSKDKVIVLAGRNIKLGANAYSAIKDPHEDAQDIQYSTAAIIGNKGISIASSGALITEGSSFKSDGDITISCGGNIQLGSVKTHFRKESGSKLEEIHKQVSTEINSGNNLTLLSEGSILFQASKFTANKEIDIAAKGGFLYAQAMEESSYYEEEKKKCNRWTLCTTKKKYTKKRHNTNNKVTEFIANGDINLFAKDDITLEASKLETAKNAKLTSKIGKVNFKAVKNTAFKQVITNSKDIYITQRNQGYIKESWALPTLYIGGKLTIDAPKGISADIKAQKGQSLEQALTVLSNTPEYAWLKELQHHQNVNWNLVKDTYSDWDDKTKQLNPVVGAVIAIAVGVATYGTATAATIGGMASKATIAAGASASVASTASVAAQAGFASLVSQATVSLAENQGNISKTLESLGRSDTVKSVVTSMVVAGALQGLDQFMGWDQAIQGGTLPSTGKLLATDSATWNQVAQRVASHSVVSSTLGTAIQGGSFIDNFKTALLSNIGSQLHAEGANLIGDNGAVLGHAGKVLSHSIVAGISAEIAGDSVTGAVAGALAAEIAAISLQSKLFEPSYLNETDRQVALIQEALQGNEGKTQLTKLIGALTGAIVTRKPEGVFSAANSAELVYRHNYSEHMFSNLALENNKDMIAASKGDVAAAERVVNRQNAGMVAIAFGLGGSASFIAGHTVIAATPELITIAQVAFNTCKANWVYCTNQLGINIAGISAPEAAIAGVTFGSGYKVLASSEESAKAFSSMLANSSKSLITSGKLNITAIKPIVEQEKLLIAANKKVIEIINNGELITYSGVTTNGYKVSNGAKTVVSKNELEYPIVQSRINIDNGNLKRGWVHVIHRHFSDKNASQFTISQVDLKLILQSNDISKIKISRIINSKDEKLYERVIILDKYIGIDKFTKNSTNIITILTDNLGNLVTVTPGRLK
>NZ_CP047340.1|WP_156733114.1|2377757_2379299_-|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein
MHKFKNINLFCFIFLLISKNSFSLNNENVNSNCFLIDKVDLTGSTPLDYRNISKVISPYLQQCLTLNDMQEVAKSITNNYIEKGYVTSQAIIPEQDLSNNKLVIRIIEGRIKNISINGISSRLIDIIFPSSKGKVLNLRDLEHGLEQLNRLTTAQYALDIQPNDSVGYSSVTINRKAKKLPLKNRLTIDNSGTETTGKILLTNTTTIDSLFGLGEQWIFSLKTNTDFPHAHYSRAYTASVNIPYGYWFYQYQLSDSSSSYSFQNNHKYIYKNKNRDQQFDISRLVYRDNKQRITLKGTLKHKKAKTQLAQQKLLINSPTLTSLSFSPEYTLSLHNGYLIINPTAEFGISLFGATPDYIADNSPRSQYRKLSLNLSYQYLLTDQFSYLTSFHSQYTPDNLYGSEKIVIDGIKAVRGYKEINFNANSGFYWRNEINISPITSFLSKWNFIFALDYGVAHSDQYETEKNKIIGSAIGASFYHSTFSSQILINKPMFYPRSLKPDCWSFYWSISLAI
>NZ_CP047340.1|WP_156733113.1|2379492_2380959_+|molybdate-ABC-transporter-ATP-binding-protein-ModF
MKYLQLNKTQFRLSDKLCLQIDNLAINEGESWAFVGSNGSGKTALANALCQEGILLSGEFINTFSRPISLSFEKLQKMIEEEWRRNNTDLLSEGEEDTGLTVAQVIQMQVKDDDRCFLLAKQFGVEYLLSRRFKYLSTGESRKILLIQLLMNKPDLIILDEPFDGLDVDSRHALNELLTLLHQQNLTIVLILNRFNDIPDFIQYAGLLINCELVANGKKEQVLSDSVIGQLSHSETLENLTLPEQDSPDASPQLSPTLSPIVLNDGVVSYNDKPVLHHLNWEVKPQQHWQILGPNGAGKSTLLSLITGDHPQGYSNDLTLFGRKRGSGETIWEIKRHIGYVSNALHQSYRVSSTVKNVIISGFHDSIGIYQAITDKQFKLADEWLALIGLTAHANHPFHSLSWGQQRLVLIVRALVKHPTLLILDEPLQGLDTTNRLLVQRFIDIMISHSNTQLLFVSHHQEDAPLCITHRLTFIKEGEIYRYQQEIC
>NZ_CP047340.1|WP_036938379.1|2381348_2382101_+|2,3-diphosphoglycerate-dependent-phosphoglycerate-mutase
MAVTKLVLVRHGESVWNKENRFTGWTDVELSEKGRNEAQEAGKLLKAEGFVFDYAYTSVLKRAIHTLWNILDQVDQQWLPVEKCWKLNERHYGALQGLNKAETAEKYGDEQVKQWRRGFAITPPELTKDDERFPGKDPRYASLTAAELPLTESLALTIDRVTPYWEEVIKPRVASGEKVIIAAHGNSLRALVKYLDNMSEDEILELNIPTAVPLVYEFDENMKPIKRYYLGNADEIAAKAAAVANQGKAK
>NZ_CP047340.1|WP_075672732.1|2382175_2383234_-|3-deoxy-7-phosphoheptulonate-synthase-AroG
MNYQNDDLKITQINELLPPVALLEKFPATDNAAFTVRHAREAIHQILAGKDDRLLVVIGPCSIHDPKAALEYAQRLSLIREELKDKLEIVMRVYFEKPRTTVGWKGLINDPHMDHTFDINEGLRIARNLLLTINDSGLPTAGEFLDMITPQYVADLMSWGAIGARTTESQVHRELSSGLSCPVGFKNGTDGTIKVAIDAINAAGSPHCFLSVTKWGHSAIVRTAGNGDCHIILRGGKEPNYSAEHVAAVKEGLKKAGLPQNVMVDFSHANSCKKFEKQMEVGADICQQISAGEKALIGVMVESHLEEGNQSLESGEPLVYGKSITDACIGWDDTETLLRQLADAVVARRNKA

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Crispr_ID: NZ_CP047340_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047340_6

3867507-3867580

Orphan

Consensus_repeat	Method
CACGGTGAAGAAGGCGGATGCTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP047340_6

>merge|NZ_CP047340|6|3867507-3867580|CRISPRCasFinder
CACGGTGAAGAAGGCGGATGCTGTGGCGGTGGCCACGGTCACGGTCATTCACACGGTGAAGAAGGTGGATGCTG

>NZ_CP047340|6|6|3867507-3867580|CRISPRCasFinder
CACGGTGAAGAAGGCGGATGCTG	TGGCGGTGGCCACGGTCACGGTCATTCA
CACGGTGAAGAAGGTGGATGCTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047340.1\|WP_075673320.1\|3855282_3856143_+\|SIS-domain-containing-protein	unknown	unknown	gnl\|CDD\|183195
NZ_CP047340.1\|WP_075674193.1\|3864298_3864844_+\|glutathione-regulated-potassium-efflux-system-ancillary-protein-KefG	unknown	unknown	gnl\|CDD\|179895
NZ_CP047340.1\|WP_036914399.1\|3866716_3866920_+\|YheV-family-putative-metal-binding-protein	unknown	unknown	gnl\|CDD\|226060
NZ_CP047340.1\|WP_099659191.1\|3853964_3854570_+\|LysE-family-translocator	unknown	unknown	gnl\|CDD\|224199
NZ_CP047340.1\|WP_083629137.1\|3871774_3872143_+\|sulfurtransferase-complex-subunit-TusC	unknown	unknown	gnl\|CDD\|178930
NZ_CP047340.1\|WP_075673318.1\|3857936_3859682_-\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|185001
NZ_CP047340.1\|WP_004246897.1\|3873068_3873539_+\|30S-ribosomal-protein-S7	unknown	unknown	gnl\|CDD\|235398
NZ_CP047340.1\|WP_075674198.1\|3872174_3872468_+\|sulfurtransferase-complex-subunit-TusB	unknown	unknown	gnl\|CDD\|184101
NZ_CP047340.1\|WP_075673319.1\|3856292_3857837_+\|PAS-domain-containing-methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|185001
NZ_CP047340.1\|WP_075674195.1\|3868280_3869033_+\|FKBP-type-peptidyl-prolyl-cis-trans-isomerase	unknown	unknown	gnl\|CDD\|236791
NZ_CP047340.1\|WP_156734280.1\|3860222_3861911_-\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|185001
NZ_CP047340.1\|WP_075674194.1\|3864849_3866703_+\|glutathione-regulated-potassium-efflux-system-protein-KefB	unknown	unknown	gnl\|CDD\|179625
NZ_CP047340.1\|WP_156734278.1\|3870159_3870318_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047340.1\|WP_075674197.1\|3871379_3871775_+\|sulfurtransferase-complex-subunit-TusD	unknown	unknown	gnl\|CDD\|178928
NZ_CP047340.1\|WP_023583301.1\|3870665_3871370_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|225512
NZ_CP047340.1\|WP_075674196.1\|3869131_3870013_-\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|223769
NZ_CP047340.1\|WP_004236497.1\|3872595_3872970_+\|30S-ribosomal-protein-S12	unknown	unknown	gnl\|CDD\|235355
NZ_CP047340.1\|WP_099659190.1\|3862242_3864177_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|236729
NZ_CP047340.1\|WP_075673322.1\|3852884_3853865_-\|hydrolase	unknown	unknown	gnl\|CDD\|182883
NZ_CP047340.1\|WP_023583298.1\|3867727_3867946_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|179472

Protein	Function_ID	Function_description	E-value
NZ_CP047340.1\|WP_075673320.1\|3855282_3856143_+\|SIS-domain-containing-protein	gnl\|CDD\|183195	PRK11557, PRK11557, MurR/RpiR family transcriptional regulator.	3.68404e-85
NZ_CP047340.1\|WP_075674193.1\|3864298_3864844_+\|glutathione-regulated-potassium-efflux-system-ancillary-protein-KefG	gnl\|CDD\|179895	PRK04930, PRK04930, glutathione-regulated potassium-efflux system ancillary protein KefG; Provisional.	6.32408e-116
NZ_CP047340.1\|WP_036914399.1\|3866716_3866920_+\|YheV-family-putative-metal-binding-protein	gnl\|CDD\|226060	COG3529, COG3529, Predicted nucleic-acid-binding protein containing a Zn-ribbon domain [General function prediction only].	6.65397e-29
NZ_CP047340.1\|WP_099659191.1\|3853964_3854570_+\|LysE-family-translocator	gnl\|CDD\|224199	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism].	3.11892e-28
NZ_CP047340.1\|WP_075673318.1\|3857936_3859682_-\|HAMP-domain-containing-protein	gnl\|CDD\|185001	PRK15041, PRK15041, methyl-accepting chemotaxis protein.	7.15924e-112
NZ_CP047340.1\|WP_004246897.1\|3873068_3873539_+\|30S-ribosomal-protein-S7	gnl\|CDD\|235398	PRK05302, PRK05302, 30S ribosomal protein S7; Validated.	4.22371e-104
NZ_CP047340.1\|WP_075674198.1\|3872174_3872468_+\|sulfurtransferase-complex-subunit-TusB	gnl\|CDD\|184101	PRK13510, PRK13510, sulfurtransferase complex subunit TusB.	1.37092e-37
NZ_CP047340.1\|WP_075673319.1\|3856292_3857837_+\|PAS-domain-containing-methyl-accepting-chemotaxis-protein	gnl\|CDD\|185001	PRK15041, PRK15041, methyl-accepting chemotaxis protein.	2.00704e-74
NZ_CP047340.1\|WP_075674195.1\|3868280_3869033_+\|FKBP-type-peptidyl-prolyl-cis-trans-isomerase	gnl\|CDD\|236791	PRK10902, PRK10902, FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional.	1.65204e-140
NZ_CP047340.1\|WP_156734280.1\|3860222_3861911_-\|HAMP-domain-containing-protein	gnl\|CDD\|185001	PRK15041, PRK15041, methyl-accepting chemotaxis protein.	3.02714e-114
NZ_CP047340.1\|WP_075674194.1\|3864849_3866703_+\|glutathione-regulated-potassium-efflux-system-protein-KefB	gnl\|CDD\|179625	PRK03659, PRK03659, glutathione-regulated potassium-efflux system protein KefB; Provisional.	0
NZ_CP047340.1\|WP_083629137.1\|3871774_3872143_+\|sulfurtransferase-complex-subunit-TusC	gnl\|CDD\|178930	PRK00211, PRK00211, sulfurtransferase complex subunit TusC.	8.05796e-60
NZ_CP047340.1\|WP_075674197.1\|3871379_3871775_+\|sulfurtransferase-complex-subunit-TusD	gnl\|CDD\|178928	PRK00207, PRK00207, sulfurtransferase complex subunit TusD.	2.10189e-74
NZ_CP047340.1\|WP_023583301.1\|3870665_3871370_+\|transcriptional-regulator	gnl\|CDD\|225512	COG2964, COG2964, Uncharacterized protein conserved in bacteria [Function unknown].	5.86016e-99
NZ_CP047340.1\|WP_075674196.1\|3869131_3870013_-\|DMT-family-transporter	gnl\|CDD\|223769	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only].	6.93127e-08
NZ_CP047340.1\|WP_004236497.1\|3872595_3872970_+\|30S-ribosomal-protein-S12	gnl\|CDD\|235355	PRK05163, rpsL, 30S ribosomal protein S12; Validated.	1.89954e-89
NZ_CP047340.1\|WP_099659190.1\|3862242_3864177_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|236729	PRK10636, PRK10636, putative ABC transporter ATP-binding protein; Provisional.	0
NZ_CP047340.1\|WP_075673322.1\|3852884_3853865_-\|hydrolase	gnl\|CDD\|182883	PRK10985, PRK10985, putative hydrolase; Provisional.	0
NZ_CP047340.1\|WP_023583298.1\|3867727_3867946_-\|hypothetical-protein	gnl\|CDD\|179472	PRK02793, PRK02793, phi X174 lysis protein; Provisional.	1.65095e-19

>NZ_CP047340.1|WP_036914399.1|3866716_3866920_+|YheV-family-putative-metal-binding-protein
MSATRKRFIAGAVCPHCQAQDTLKMWREDKVDIVECAKCGHQQRQTEGEVNSLVRENEQVIGIFTPQ
>NZ_CP047340.1|WP_075674194.1|3864849_3866703_+|glutathione-regulated-potassium-efflux-system-protein-KefB
MEDNWMIKAVLFFLCAAVIMVPIAQRLKIGAVLGYLIAGIAIGPWGLGLFKDVDNILHFAELGVVFLMFLIGLELNPAKLWELRRAIFGVGSMQVVLTASIFSGLILVFTSFSWQAAVIGGLGIAMSSTAMALQLMNEKGMNHNEGGQLGFAVLLFQDMAVIPILAVIPLLAGETASSDWYRIGVKVAAFAGLLICGRYLLRPLLRLVVKSGVREVFTAAALLVVLGAAIFMETLGFSMAMGTFIAGVLLADSEYRHELEISIEPFKGLLLGLFFISVGMSLDIGILWRYLPQVLLGVLVLVIVKALILYSIAWLARLRFSTRLQFSAVLSQGGEFAFVVFSTSMAMGVLDSQQMALLLVVVTLSMMTTPLVMQMTDAVFARRYNEAKTDEQPFVENNHPEVILVGFGRMGQVVGRLLMANKINVTVLEHDVGSISTMRKYGYKVYYGDATDLNLLRAAGAEHAKTIVITCNEPEATMEIVHLCQHHFPNLHIIARARGRVEAHELLKAGVTDFSRETFSSALELGRKTLIELGMHPHQAYRAQQHFRRLDINLLRKLVDESPEEVSNVSRVKEARRELEELFSEEIRQEHHQPDIWDESLTEDIPQIHKEKKSIDK
>NZ_CP047340.1|WP_075674193.1|3864298_3864844_+|glutathione-regulated-potassium-efflux-system-ancillary-protein-KefG
MSNASNVLLVYVHPEPRQSIANKALLKAVRDLENITIHDLYATYPDFFIDIHHEQSLLCKHQVIVFQFPLQTYSCPALLKEWQDRVLTRPFANKAGRAQLKGKSFRCVITTGEPEQAYQHDGKNHYTLTELLRPFELMAEMCGMRWLSPMIVYSARQQSKTTLTHIGEAYRHWLSAPLEGE
>NZ_CP047340.1|WP_099659190.1|3862242_3864177_-|ABC-transporter-ATP-binding-protein
MIVFSSLQIRRGVRVLLDNASATINPGQKIGLVGKNGCGKTTLLSLLKGELQSEAGNVTYPSTWSMAWVNQETPALDVPAIDYVIDGDREYRQLEQRLQKANEINDGHAIALIHGQLDAINAWTIQSRAATLLNGLGFSQQQLNEPVKSFSGGWRMRLNLAQALICRSDLLLLDEPTNHLDLDAVIWLEKWLKSYTGTLILISHDRDFLDPIVDKILHIEQEKIFEYSGNYSSFEMQRATKLAQQQALFENQQAKIAHLQSFIDRFKAKATKAKQAQSRVKMLERMEKVAPAHSDNPFHFSFRQPESLPNPLLSMEKVSAGYGEKIILNDIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGEIEPLQGKLALSKGIKLGYFAQHQLEFLRSDESALQHLTRLAPKETEQKLRDYLGGFGFHGDKVTDACGQFSGGEKARLVLSLLVWQRPNLLLMDEPTNHLDLDMRQALTQALISFEGAIVVVSHDRHLLRSTTDDLYLVHDGQVEPFDGDLDDYQQWLVDQNRQETQANKSQQDNDNITTTTNLSAQDKKEQKRKEAEFRQQTQPLRKKLTTLESKMDKLSQELSDIETALSDSGIYDTSRKNELSDCLNRQGVAKSALEEVEMEWMELQETLEEMTNTFEAQ
>NZ_CP047340.1|WP_156734280.1|3860222_3861911_-|HAMP-domain-containing-protein
MLKRIKISQGLMCVLTLFCIIQIISGVQSIHDAYQTQNTLKRISYSFDQLRTMDNTYAELNTLRTDIIAQAFNYISNPQTEDANVTAFMQTMPERKAQVDALMNEYVELSAQTGFDQQRMAQIKQLYQKSRADLDLLAQYLSERNTNAVRLILKSPANTNFTNSLYEATDFITDEVVNPSVIEAEGNYHSMLWIASLFMGIFLIFTTLVLIWIRKYIIVRINQMIIYQEAIAKGDLVSRIDSDVSGKTEIDQLMLGLQQMRAQLKEMVSSIRNTSATIYTGVQEIAAGNNDLSSRTEEQASALEETASSMEQMTATIRNNTESAREVTELVMSTADIAVQGGEHSNKMVMTMTDIADRSQKIGEITAVIDDIAFQTNILALNAAVEAARAGEQGRGFSVVASEVRNLAQRSAEAAKEIKELIESTISRVRQGNDLVEQVSLSMGEIVTSVNHVSGSMKEILSASEEQTRGIAQISLAVNEMDKATQQNAAMVEQSTAASATLSEQAGMLDTIVNTFKVEHEKVAPTKTKLPTFSAKSQDTETLKTPTIKTNNHETDDNWESF
>NZ_CP047340.1|WP_075673318.1|3857936_3859682_-|HAMP-domain-containing-protein
MLKRIKISNGLMFILILFCAIQLFSGAMSIRDASLTNKRISQLANGFEQIKTMDYGYAELNKLREDMLNVMFEAHLTPDIAESKISDFISSYPKRKQEITRIITAYFTATEEADFDPEKIESMKKLFNRVLYDLDQLVSCLEIRDYYGFQSLYAHNTNDRFTQSLYEATDYLSDNVVTHAIKAAQGNYERTLVLAFVFMFIFILFTVLVVLWIRRNIVLRINQIVDYMSKISQGNLLENKDVTVKGNNEIDQLITGIQYMRTELSLIVNAIRGTSHHIYTGVQELSAGNTDLSCRTEEQASALEETASSMEQLTATVRNNTESAREVSHLISQTSNIASKGGDVTNRMVKTMTDIADSSQKIGEITAVINSIAFQTNILSLNAAVEAARAGEQGRGFSVVATEVRELAQRSAEAAKEIKELIDASISRVRHGNDLVEQVSISMGEILTSVKHVEDSMTEILSASEEQTRGITQVSLAVTEMDKATQQNATMVEQSSAVASLLTEEAGNLEQIVEQFKTAESEQFNKKTQHKVIEKQFSSEKSQHTKDENMKNIAKDDVKERKSAKGTATVNDGEDDDWTSF
>NZ_CP047340.1|WP_075673319.1|3856292_3857837_+|PAS-domain-containing-methyl-accepting-chemotaxis-protein
MRNNQPVTQREYPVSENATLMSTTDLDGNIIYANEDFVEASGFSVEELVGQPHNIVRHPDIPSAVFKDMWKTLKQGEVWTGIVKNRRKNGDYYWVRANITPIIRQGKIQSFMSVRTSARKEEIAQASALYAAFNQGKYPSHMFLKGAFVYKGWQRWRSWNQTISLKKRLRLFILLPLPFMLLSAWFAGLSGYALFMHMAILLVLLMANERILYFQIVKPIRLLNEQANRVATGDEHNVTYINRIDEVGMTQRSVNQLGRMFRWLVSDVSHQIHQVDISCDQLAAGNRDLYVRTEQTASNVEATASTMNELTTAVSSNSETAGQANNLSNVTCEAAIKGGNAMDNIVNTMNDIAKSSDRISNIIGVIDSIAFQTNILALNASVEAARAGEQGRGFSVVATEVRELAQRSAEAAKEIKTLISASSSNIKVGSKQVNETVGTMEDIVVHVKNVTDLIGEISLASSEQSAGLKELGRAVEKLESITHENANYVSKASMISGEMKVQTNYLVSAINVFH
>NZ_CP047340.1|WP_075673320.1|3855282_3856143_+|SIS-domain-containing-protein
MPTLTKIAWIKPGMATNQRKIADYILDNPEKTITLSSQQLAETMGVSQSAIVKFSQKIGFKGFPSLKLAISEELGRKNANSGANPSLLHNQIGSEDSLEVIAQKLAQEKNNSICDTTRQINYLHFEKVIQLIDEAQRVQIIGIGGSGLVARDLSYKLQKIGITTLIETDHHVQISVAQMLSSKDLQIVISYSGKRKDMLVAASVAKKQGAKIIAITGEKHSPLGRISDYILETIADEGEWRSASISSRTAQNTITDLIFMALLKKRDECAKTLVLSSQALINSLDN
>NZ_CP047340.1|WP_099659191.1|3853964_3854570_+|LysE-family-translocator
MTISLVFSLTIFLFIAAITPGPNNLLLTSSGANVGFKGSLKLMAGIMLGMQCVLLSSAFGVAALLIIYPALHIGLKIIGSAYLLWLAWKTATSSYQRLDIPAKTPQAVSWFQGGLLQFLNPKAWMMGLGAVGSFSLSGDAYFSSVIAISIVMVIVNFVAGIVWILGGTLISLFLQSRRSWFVFNISMGLLTALCVPLIWIE
>NZ_CP047340.1|WP_075673322.1|3852884_3853865_-|hydrolase
MSQYFNPIRWAKNPHLQTLLPRIVRRTPQLTPHWQRLNLPDNDFVDLAWSEDPATALDKPRLVIFHGLEGGFSSPYAHGMLAAAKERGWLSVVMHFRGCSGEPNRQNRIYHSGETEDARYFLNWLKKEFGEQPTAAVGYSLGGNMLAYYLAESGENAVVDAAVIVSAPLMLEPCSTKIEHGFSRFYQWYLLKELKNNATRKLIRYPESLPISLLTIKSIKKLRQFDDLITSKIHGFKDALDYYRQCSALPLLNKIKKTTLIIHAKDDPFMSADVIPDVKTLPNNIEYQLTEFGGHVGFVGGKLSKPVMWLERRIPDWLATYLEKAK
>NZ_CP047340.1|WP_023583298.1|3867727_3867946_-|hypothetical-protein
MDIKEVERLLIQLESKVAFQDATIEELNQVVTQQQIEISRFKEALKIVSERLKNSQTSILARPEDETPPPHY
>NZ_CP047340.1|WP_075674195.1|3868280_3869033_+|FKBP-type-peptidyl-prolyl-cis-trans-isomerase
MKSLLKTTLLATSLAFAFSAPHAFAEEATAKVPTLNSAFKTQNEQNAYALGASMGRYMEAALQEQKNIGITLDSKQLLAGVQDAFNSKSKLSDAEIELTLAAFEDQVRTAATAKMEKEATENKAAGDKFRTEFAAEKGVVKTKSGLLYLVENPGKGKTPTDADRVTVNYKGMLIDGKQFDSSYDRNEPLTISLKSVIPGWTEGMKYIKEGGKIKLVIPPELGYGQRATSGIPANSTLVFEVELLSVESDK
>NZ_CP047340.1|WP_075674196.1|3869131_3870013_-|DMT-family-transporter
MYLRQYWAKFGPTTLFVLLWSSGAIFSRWGLDNGSSFAILTWRFIIALAFLSFLCIQRHRFLPPKGSRLKTAWVGLLIIGGYSICYLLALANSITPGMLATIMGVQPIITLWIIERNFTATRLLGLLIALAGLVLVVAQSLFNTALSLTGMIYALVALLCMSFGAISQKKLQLAPMDALPLQYVVSLALCLLFVPFQPFHASFDIGFIIPVLWLAVIISVVAQLLLYRLLTAGNLVNVTSLFYLVPGVTALMDYIFLGNKMSWLSLAGMGAIIVGLLFVFKKPKAIIIEETID
>NZ_CP047340.1|WP_156734278.1|3870159_3870318_-|hypothetical-protein
MNTLMICQSQQTSSIIGSISVASMPIEILSSPPPPVKVVVVNTTVVVATHVA
>NZ_CP047340.1|WP_023583301.1|3870665_3871370_+|transcriptional-regulator
MSSPLFNGDSSEFEKLDSRPFTQTDHEILKSYEAAVDGLAMLIGNHCEIVLHSLEDLKCSAVKIANGEHTGRKIGSPITDLALQMLHDITDEDSSFSKAYFTRAKSGALMKSITIAIRNRERRVIGLLCINMNLDVPFSEIIKTFIPEETHEVASDVNFASSVDDLVAQTLEFTIEEVNNDREVANNAKNKQVVLSLYEKGIFDIKDAINQVADRLNISKHTVYLYIRQFKNGE
>NZ_CP047340.1|WP_075674197.1|3871379_3871775_+|sulfurtransferase-complex-subunit-TusD
MSSLTYCLVVTGPHYGTEQASSAYLFANALLEKGHKISQVFFYREGVVNANKLVSPANDEFDLPKAWVTLAKKHQIPLNVCVAAALRRGIIDEQQAKEQERDCHNMATEFELSGLGSLAQAMLTCSRVVQF
>NZ_CP047340.1|WP_083629137.1|3871774_3872143_+|sulfurtransferase-complex-subunit-TusC
MKKMNSIAFLFTQAPHGNSAGREGLDALLATSALTEDIGVFFISDGVFQLVENQQPEGVLSRHHAATFKVLPLYDVTNVYISQKDMAHRGLSSQTSFVLDAQVISQEDIAQKLSEYDVVLRF
>NZ_CP047340.1|WP_075674198.1|3872174_3872468_+|sulfurtransferase-complex-subunit-TusB
MLYTYSVSIYQSDLEAFLSLLAKEDDVLLIQDGVLAVLEDNPLLKYCLQQQISVYALIDDVLARGLKDQVSHHIKLINYGDFVDLTVKHPQQIHWGA
>NZ_CP047340.1|WP_004236497.1|3872595_3872970_+|30S-ribosomal-protein-S12
MATINQLVRKSRSSKVVKSNVPALEACPQKRGVCTRVYTTTPKKPNSALRKVCRVRLTNGFEVSSYIGGEGHNLQEHSVILIRGGRVKDLPGVRYHTVRGALDCSGVKDRKQARSKYGVKKPKA
>NZ_CP047340.1|WP_004246897.1|3873068_3873539_+|30S-ribosomal-protein-S7
MPRRRVIGQRKILPDPKFGSELLAKFVNILMVDGKKSTAESIVYNALETLAQRSGKTELEAFEIALDNVRPTVEVKSRRVGGSTYQVPVEVRPVRRNALAMRWIVEAARKRGDKSMALRLANELSDAAENKGAAVKKREDVHRMADANKAFAHYRW

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP047340_2	2.20\|711229\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	711229-711260	32	NZ_CP047340.1	1019526-1019557	0	1.0
NZ_CP047340_2	2.21\|711289\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	711289-711320	32	NZ_CP047340.1	3983135-3983166	0	1.0
NZ_CP047340_2	2.3\|710209\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	710209-710240	32	NZ_CP047340.1	2130877-2130908	1	0.969
NZ_CP047340_1	1.1\|84533\|43\|NZ_CP047340\|CRISPRCasFinder	84533-84575	43	NZ_CP047340.1	2368608-2368650	2	0.953
NZ_CP047340_2	2.1\|710089\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	710089-710120	32	NZ_CP047340.1	2132501-2132532	2	0.938

1. spacer 2.20|711229|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to position: 1019526-1019557, mismatch: 0, identity: 1.0

cgttagcttggtagcttcttgatgcagagatg	CRISPR spacer
cgttagcttggtagcttcttgatgcagagatg	Protospacer
********************************

2. spacer 2.21|711289|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to position: 3983135-3983166, mismatch: 0, identity: 1.0

aaagaacaggcacatcgattgcagcgaatacg	CRISPR spacer
aaagaacaggcacatcgattgcagcgaatacg	Protospacer
********************************

3. spacer 2.3|710209|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to position: 2130877-2130908, mismatch: 1, identity: 0.969

aagaaggtttagcaccatcagttgatgagaaa	CRISPR spacer
aagaagggttagcaccatcagttgatgagaaa	Protospacer
******* ************************

4. spacer 1.1|84533|43|NZ_CP047340|CRISPRCasFinder matches to position: 2368608-2368650, mismatch: 2, identity: 0.953

tgtgttcattcgtactagccatatacttatgatactcgtcata	CRISPR spacer
tgtgttcattcgcactagccacatacttatgatactcgtcata	Protospacer
************.********.*********************

5. spacer 2.1|710089|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to position: 2132501-2132532, mismatch: 2, identity: 0.938

ttgctgattgataacgcctaaatgttcgaggt	CRISPR spacer
ttgctgattgataacacctaaatgttcaaggt	Protospacer
***************.***********.****

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP047340_2	2.13\|710809\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	710809-710840	32	MK047642	Phage NG55, complete genome	34706-34737	0	1.0
NZ_CP047340_2	2.22\|711349\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	711349-711380	32	MK047639	Phage NGI4, complete genome	5878-5909	0	1.0
NZ_CP047340_2	2.23\|711409\|32\|NZ_CP047340\|CRISPRCasFinder,CRT	711409-711440	32	MK047640	Phage NV18, complete genome	10798-10829	0	1.0
NZ_CP047340_3	3.1\|720211\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	720211-720242	32	NZ_KX832927	Providencia rettgeri strain 16pre36 plasmid p16Pre36-NDM, complete sequence	8953-8984	0	1.0
NZ_CP047340_3	3.1\|720211\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	720211-720242	32	NZ_MH491967	Proteus mirabilis strain HFK418 plasmid pHFK418-NDM, complete sequence	127887-127918	0	1.0
NZ_CP047340_3	3.15\|721051\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	721051-721082	32	NZ_MH491967	Proteus mirabilis strain HFK418 plasmid pHFK418-NDM, complete sequence	129640-129671	0	1.0
NZ_CP047340_2	2.8\|710509\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	710509-710540	32	MK047640	Phage NV18, complete genome	22861-22892	1	0.969
NZ_CP047340_2	2.8\|710509\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	710509-710540	32	KY420199	Proteus phage vB_PvuS_Pm34, complete genome	14367-14398	1	0.969
NZ_CP047340_2	2.12\|710749\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	710749-710780	32	MK047642	Phage NG55, complete genome	4707-4738	1	0.969
NZ_CP047340_3	3.1\|720211\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	720211-720242	32	NZ_KX774387	Providencia rettgeri strain 30905 plasmid pC131, complete sequence	75614-75645	1	0.969
NZ_CP047340_3	3.1\|720211\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	720211-720242	32	NZ_KX832929	Providencia rettgeri strain 06-1619 plasmid p06-1619-1, complete sequence	8943-8974	1	0.969
NZ_CP047340_3	3.1\|720211\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	720211-720242	32	NZ_CP053895	Proteus mirabilis strain JPM24 plasmid pJPM24, complete sequence	8856-8887	1	0.969
NZ_CP047340_3	3.1\|720211\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	720211-720242	32	NZ_CP047288	Proteus cibarius strain G11 plasmid p152, complete sequence	100587-100618	1	0.969
NZ_CP047340_3	3.1\|720211\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	720211-720242	32	NZ_CP053372	Proteus cibarius strain G32 plasmid pG32-177, complete sequence	95842-95873	1	0.969
NZ_CP047340_3	3.1\|720211\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	720211-720242	32	NZ_CP053043	Proteus cibarius strain HNCF44W plasmid pHNCF44W_NDM-1, complete sequence	133751-133782	1	0.969
NZ_CP047340_3	3.1\|720211\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	720211-720242	32	MG516912	Proteus penneri plasmid pPp47, complete sequence	18554-18585	1	0.969
NZ_CP047340_3	3.1\|720211\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	720211-720242	32	MG516911	Proteus mirabilis plasmid pPm60, complete sequence	18602-18633	1	0.969
NZ_CP047340_3	3.1\|720211\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	720211-720242	32	NZ_CP045540	Proteus mirabilis strain CRE14IB plasmid pIB_NDM_1, complete sequence	79884-79915	1	0.969
NZ_CP047340_3	3.1\|720211\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	720211-720242	32	NC_022589	Providencia rettgeri strain 09ACRGNY2001 plasmid pPrY2001, complete sequence	8942-8973	1	0.969
NZ_CP047340_3	3.1\|720211\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	720211-720242	32	NZ_CP047114	Proteus mirabilis strain SCBX1.1 plasmid plas1.1.2, complete sequence	7941-7972	1	0.969
NZ_CP047340_3	3.1\|720211\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	720211-720242	32	NZ_CP053897	Providencia rettgeri strain YPR31 plasmid pYPR31, complete sequence	114406-114437	1	0.969
NZ_CP047340_3	3.1\|720211\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	720211-720242	32	NZ_CP053899	Proteus mirabilis strain YPM35 plasmid pJPM35-1, complete sequence	78173-78204	1	0.969
NZ_CP047340_3	3.2\|720271\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	720271-720302	32	MK047642	Phage NG55, complete genome	29095-29126	1	0.969
NZ_CP047340_3	3.7\|720571\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	720571-720602	32	MW145137	Providencia phage PSTNGR2lys, complete genome	1716-1747	1	0.969
NZ_CP047340_3	3.10\|720751\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	720751-720782	32	MK047642	Phage NG55, complete genome	30790-30821	1	0.969
NZ_CP047340_3	3.15\|721051\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	721051-721082	32	NZ_KX832927	Providencia rettgeri strain 16pre36 plasmid p16Pre36-NDM, complete sequence	7200-7231	1	0.969
NZ_CP047340_2	2.7\|710449\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	710449-710480	32	MK047642	Phage NG55, complete genome	22445-22476	2	0.938
NZ_CP047340_2	2.11\|710689\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	710689-710720	32	MK047642	Phage NG55, complete genome	36329-36360	2	0.938
NZ_CP047340_2	2.21\|711289\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	711289-711320	32	KY420199	Proteus phage vB_PvuS_Pm34, complete genome	30533-30564	2	0.938
NZ_CP047340_3	3.15\|721051\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	721051-721082	32	NZ_KX774387	Providencia rettgeri strain 30905 plasmid pC131, complete sequence	77368-77399	2	0.938
NZ_CP047340_3	3.15\|721051\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	721051-721082	32	NZ_KX832929	Providencia rettgeri strain 06-1619 plasmid p06-1619-1, complete sequence	7190-7221	2	0.938
NZ_CP047340_3	3.15\|721051\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	721051-721082	32	NZ_CP053895	Proteus mirabilis strain JPM24 plasmid pJPM24, complete sequence	10609-10640	2	0.938
NZ_CP047340_3	3.15\|721051\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	721051-721082	32	NZ_CP047288	Proteus cibarius strain G11 plasmid p152, complete sequence	102340-102371	2	0.938
NZ_CP047340_3	3.15\|721051\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	721051-721082	32	NZ_CP053372	Proteus cibarius strain G32 plasmid pG32-177, complete sequence	97595-97626	2	0.938
NZ_CP047340_3	3.15\|721051\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	721051-721082	32	NZ_CP053043	Proteus cibarius strain HNCF44W plasmid pHNCF44W_NDM-1, complete sequence	135504-135535	2	0.938
NZ_CP047340_3	3.15\|721051\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	721051-721082	32	MG516912	Proteus penneri plasmid pPp47, complete sequence	16801-16832	2	0.938
NZ_CP047340_3	3.15\|721051\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	721051-721082	32	MG516911	Proteus mirabilis plasmid pPm60, complete sequence	16849-16880	2	0.938
NZ_CP047340_3	3.15\|721051\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	721051-721082	32	NZ_CP045540	Proteus mirabilis strain CRE14IB plasmid pIB_NDM_1, complete sequence	81637-81668	2	0.938
NZ_CP047340_3	3.15\|721051\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	721051-721082	32	NC_022589	Providencia rettgeri strain 09ACRGNY2001 plasmid pPrY2001, complete sequence	7189-7220	2	0.938
NZ_CP047340_3	3.15\|721051\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	721051-721082	32	NZ_CP047114	Proteus mirabilis strain SCBX1.1 plasmid plas1.1.2, complete sequence	6188-6219	2	0.938
NZ_CP047340_3	3.15\|721051\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	721051-721082	32	NZ_CP053897	Providencia rettgeri strain YPR31 plasmid pYPR31, complete sequence	116159-116190	2	0.938
NZ_CP047340_3	3.15\|721051\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	721051-721082	32	NZ_CP053899	Proteus mirabilis strain YPM35 plasmid pJPM35-1, complete sequence	76420-76451	2	0.938
NZ_CP047340_2	2.2\|710149\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	710149-710180	32	MK047640	Phage NV18, complete genome	19551-19582	3	0.906
NZ_CP047340_2	2.9\|710569\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	710569-710600	32	MN340231	Escherichia phage phiv205-1, complete genome	25369-25400	3	0.906
NZ_CP047340_2	2.9\|710569\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	710569-710600	32	MT813197	Escherichia phage vB_EcoP_Kapi1, complete genome	19542-19573	3	0.906
NZ_CP047340_2	2.9\|710569\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	710569-710600	32	MH717096	Escherichia phage N7, complete genome	833-864	3	0.906
NZ_CP047340_2	2.9\|710569\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	710569-710600	32	NC_005344	Enterobacteria phage Sf6, complete genome	833-864	3	0.906
NZ_CP047340_2	2.2\|710149\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	710149-710180	32	MW145137	Providencia phage PSTNGR2lys, complete genome	10621-10652	5	0.844
NZ_CP047340_2	2.9\|710569\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	710569-710600	32	NC_002730	Enterobacteria phage HK620, complete genome	20513-20544	5	0.844
NZ_CP047340_2	2.9\|710569\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	710569-710600	32	AF335538	Bacteriophage HK620, complete genome	20513-20544	5	0.844
NZ_CP047340_2	2.9\|710569\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	710569-710600	32	MT833387	Escherichia phage HF4s, complete genome	846-877	5	0.844
NZ_CP047340_2	2.4\|710269\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	710269-710300	32	MN013086	Klebsiella phage vB_Kpn_Chronis, complete genome	35141-35172	6	0.812
NZ_CP047340_2	2.9\|710569\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	710569-710600	32	CP000711	Enterobacteria phage CUS-3, complete genome	21824-21855	6	0.812
NZ_CP047340_2	2.9\|710569\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	710569-710600	32	KJ832078	Enterobacteria phage Sf101, complete genome	839-870	6	0.812
NZ_CP047340_3	3.8\|720631\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	720631-720662	32	MK977699	Gordonia Phage Lollipop1437, complete genome	67012-67043	6	0.812
NZ_CP047340_6	6.1\|3867530\|28\|NZ_CP047340\|CRISPRCasFinder	3867530-3867557	28	NZ_CP039965	Pseudorhodobacter sp. S12M18 plasmid unnamed1, complete sequence	1369011-1369038	6	0.786
NZ_CP047340_6	6.1\|3867530\|28\|NZ_CP047340\|CRISPRCasFinder	3867530-3867557	28	NZ_AP014579	Burkholderia sp. RPE67 plasmid p1, complete sequence	392006-392033	6	0.786
NZ_CP047340_6	6.1\|3867530\|28\|NZ_CP047340\|CRISPRCasFinder	3867530-3867557	28	NC_016626	Burkholderia sp. YI23 plasmid byi_1p, complete sequence	234009-234036	6	0.786
NZ_CP047340_6	6.1\|3867530\|28\|NZ_CP047340\|CRISPRCasFinder	3867530-3867557	28	NC_016626	Burkholderia sp. YI23 plasmid byi_1p, complete sequence	234093-234120	6	0.786
NZ_CP047340_6	6.1\|3867530\|28\|NZ_CP047340\|CRISPRCasFinder	3867530-3867557	28	MN310546	Microbacterium phage PhriedRice, complete genome	6113-6140	6	0.786
NZ_CP047340_6	6.1\|3867530\|28\|NZ_CP047340\|CRISPRCasFinder	3867530-3867557	28	MT310890	Microbacterium phage Phedro, complete genome	6113-6140	6	0.786
NZ_CP047340_6	6.1\|3867530\|28\|NZ_CP047340\|CRISPRCasFinder	3867530-3867557	28	MT310889	Microbacterium phage Phractured, complete genome	6113-6140	6	0.786
NZ_CP047340_6	6.1\|3867530\|28\|NZ_CP047340\|CRISPRCasFinder	3867530-3867557	28	MT310891	Microbacterium phage Pharky, complete genome	6113-6140	6	0.786
NZ_CP047340_6	6.1\|3867530\|28\|NZ_CP047340\|CRISPRCasFinder	3867530-3867557	28	CP040467	Streptomyces albidoflavus strain UYFA156 plasmid unnamed, complete sequence	213362-213389	6	0.786
NZ_CP047340_2	2.9\|710569\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	710569-710600	32	MN856055	Myoviridae sp. isolate 330, complete genome	19658-19689	7	0.781
NZ_CP047340_3	3.1\|720211\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	720211-720242	32	NC_019765	Stanieria cyanosphaera PCC 7437 plasmid pSTA7437.01, complete sequence	117733-117764	7	0.781
NZ_CP047340_3	3.1\|720211\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	720211-720242	32	AP014146	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C4B-MedDCM-OCT-S30-C112, * SEQUENCING IN PROGRESS *	17373-17404	7	0.781
NZ_CP047340_3	3.1\|720211\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	720211-720242	32	AP014142	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C4B-MedDCM-OCT-S23-C187, * SEQUENCING IN PROGRESS *	5008-5039	7	0.781
NZ_CP047340_3	3.1\|720211\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	720211-720242	32	AP014149	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C4B-MedDCM-OCT-S34-C126, * SEQUENCING IN PROGRESS *	1116-1147	7	0.781
NZ_CP047340_3	3.1\|720211\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	720211-720242	32	AP014143	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C4B-MedDCM-OCT-S24-C76, * SEQUENCING IN PROGRESS *	28510-28541	7	0.781
NZ_CP047340_3	3.1\|720211\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	720211-720242	32	AP014148	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C4B-MedDCM-OCT-S32-C91, * SEQUENCING IN PROGRESS *	1115-1146	7	0.781
NZ_CP047340_3	3.1\|720211\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	720211-720242	32	AP014153	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C4B-MedDCM-OCT-S44-C323, * SEQUENCING IN PROGRESS *	957-988	7	0.781
NZ_CP047340_3	3.1\|720211\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	720211-720242	32	AP014144	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C4B-MedDCM-OCT-S25-C77, * SEQUENCING IN PROGRESS *	29367-29398	7	0.781
NZ_CP047340_3	3.1\|720211\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	720211-720242	32	GU943033	Uncultured phage MedDCM-OCT-S08-C1731 genomic sequence	10102-10133	7	0.781
NZ_CP047340_3	3.9\|720691\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	720691-720722	32	MW057859	Providencia phage PSTCR8lys, complete genome	6098-6129	7	0.781
NZ_CP047340_3	3.15\|721051\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	721051-721082	32	NC_021594	Serratia plymuthica 4Rx13 plasmid p75, complete sequence	39133-39164	7	0.781
NZ_CP047340_3	3.15\|721051\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	721051-721082	32	NC_013085	Synechococcus phage S-RSM4, complete genome	72716-72747	7	0.781
NZ_CP047340_3	3.15\|721051\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	721051-721082	32	FM207411	Synechococcus phage S-RSM4 complete genome	72716-72747	7	0.781
NZ_CP047340_6	6.1\|3867530\|28\|NZ_CP047340\|CRISPRCasFinder	3867530-3867557	28	NZ_AP014579	Burkholderia sp. RPE67 plasmid p1, complete sequence	306272-306299	7	0.75
NZ_CP047340_6	6.1\|3867530\|28\|NZ_CP047340\|CRISPRCasFinder	3867530-3867557	28	NZ_AP014579	Burkholderia sp. RPE67 plasmid p1, complete sequence	391880-391907	7	0.75
NZ_CP047340_6	6.1\|3867530\|28\|NZ_CP047340\|CRISPRCasFinder	3867530-3867557	28	NC_016626	Burkholderia sp. YI23 plasmid byi_1p, complete sequence	98640-98667	7	0.75
NZ_CP047340_6	6.1\|3867530\|28\|NZ_CP047340\|CRISPRCasFinder	3867530-3867557	28	NZ_AP022319	Burkholderia sp. THE68 plasmid BTHE68_p1, complete sequence	444273-444300	7	0.75
NZ_CP047340_6	6.1\|3867530\|28\|NZ_CP047340\|CRISPRCasFinder	3867530-3867557	28	NZ_CP021115	Rhodobacteraceae bacterium strain G7 plasmid unnamed1, complete sequence	78385-78412	7	0.75
NZ_CP047340_2	2.4\|710269\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	710269-710300	32	NZ_CP038654	Citrobacter freundii strain 154 plasmid p154_1, complete sequence	292636-292667	8	0.75
NZ_CP047340_2	2.4\|710269\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	710269-710300	32	NZ_CP038659	Citrobacter freundii strain 680 plasmid p680_1, complete sequence	322435-322466	8	0.75
NZ_CP047340_2	2.7\|710449\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	710449-710480	32	NZ_CP021357	Rhodococcus sp. S2-17 plasmid pRB11, complete sequence	55628-55659	8	0.75
NZ_CP047340_2	2.9\|710569\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	710569-710600	32	MN693421	Marine virus AFVG_25M197, complete genome	34475-34506	8	0.75
NZ_CP047340_2	2.17\|711049\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	711049-711080	32	NC_027352	Bacillus phage JBP901, complete genome	6218-6249	8	0.75
NZ_CP047340_3	3.9\|720691\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	720691-720722	32	NC_010631	Nostoc punctiforme PCC 73102 plasmid pNPUN01, complete sequence	55018-55049	8	0.75
NZ_CP047340_3	3.11\|720811\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	720811-720842	32	MK448399	Streptococcus satellite phage Javan283, complete genome	10292-10323	8	0.75
NZ_CP047340_3	3.11\|720811\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	720811-720842	32	MK448396	Streptococcus satellite phage Javan280, complete genome	10292-10323	8	0.75
NZ_CP047340_3	3.11\|720811\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	720811-720842	32	MK448398	Streptococcus satellite phage Javan282, complete genome	10292-10323	8	0.75
NZ_CP047340_3	3.11\|720811\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	720811-720842	32	MK448394	Streptococcus satellite phage Javan277, complete genome	10292-10323	8	0.75
NZ_CP047340_3	3.11\|720811\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	720811-720842	32	MK448397	Streptococcus satellite phage Javan281, complete genome	10292-10323	8	0.75
NZ_CP047340_6	6.1\|3867530\|28\|NZ_CP047340\|CRISPRCasFinder	3867530-3867557	28	NZ_CP041158	Leisingera aquaemixtae strain R2C4 plasmid unnamed4, complete sequence	57142-57169	8	0.714
NZ_CP047340_6	6.1\|3867530\|28\|NZ_CP047340\|CRISPRCasFinder	3867530-3867557	28	NC_017957	Tistrella mobilis KA081020-065 plasmid pTM1, complete sequence	295428-295455	8	0.714
NZ_CP047340_2	2.3\|710209\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	710209-710240	32	NZ_CP045959	Salmonella enterica subsp. enterica serovar Birkenhead strain AUSMDU00010532 plasmid pAUSMDU00010532_01, complete sequence	130518-130549	9	0.719
NZ_CP047340_2	2.8\|710509\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	710509-710540	32	MT773555	Myoviridae sp. isolate BML_3 genomic sequence	188055-188086	9	0.719
NZ_CP047340_2	2.23\|711409\|32\|NZ_CP047340\|CRISPRCasFinder,CRT	711409-711440	32	NZ_CP010738	Phaeobacter inhibens strain P72 plasmid pP72_c, complete sequence	52529-52560	9	0.719
NZ_CP047340_3	3.1\|720211\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	720211-720242	32	NZ_CP023318	Bacillus megaterium strain A plasmid p1, complete sequence	107334-107365	9	0.719
NZ_CP047340_3	3.1\|720211\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	720211-720242	32	NZ_CP040366	Bacillus flexus isolate 1-2-1 plasmid punnamed3, complete sequence	75592-75623	9	0.719
NZ_CP047340_3	3.1\|720211\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	720211-720242	32	NC_015512	Haliscomenobacter hydrossis DSM 1100 plasmid pHALHY02, complete sequence	91502-91533	9	0.719
NZ_CP047340_3	3.8\|720631\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	720631-720662	32	NZ_CP025812	Sulfitobacter sp. SK025 plasmid unnamed4, complete sequence	70151-70182	9	0.719
NZ_CP047340_3	3.11\|720811\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	720811-720842	32	NZ_CP048880	Oceanospirillales bacterium S2-4-1H plasmid pB, complete sequence	17636-17667	9	0.719
NZ_CP047340_3	3.13\|720931\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	720931-720962	32	NZ_CP020413	Leptospira interrogans serovar Copenhageni strain FDAARGOS_203 plasmid unnamed1, complete sequence	116737-116768	9	0.719
NZ_CP047340_2	2.7\|710449\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	710449-710480	32	NZ_CP032349	Azospirillum brasilense strain MTCC4039 plasmid p3, complete sequence	551281-551312	10	0.688
NZ_CP047340_3	3.3\|720331\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	720331-720362	32	NC_010815	Geobacter lovleyi SZ plasmid pGLOV01, complete sequence	67822-67853	10	0.688
NZ_CP047340_3	3.13\|720931\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	720931-720962	32	NZ_CP053846	Campylobacter sp. CCUG 57310 plasmid pCORI-1, complete sequence	6388-6419	10	0.688
NZ_CP047340_3	3.15\|721051\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	721051-721082	32	NZ_CP039840	Escherichia coli O157:H7 strain USDA5905 plasmid pUSDA5905_4, complete sequence	2151-2182	10	0.688
NZ_CP047340_3	3.15\|721051\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	721051-721082	32	NZ_CP051742	Escherichia coli strain SCU-105 plasmid pSCU-105-4, complete sequence	3575-3606	10	0.688
NZ_CP047340_2	2.23\|711409\|32\|NZ_CP047340\|CRISPRCasFinder,CRT	711409-711440	32	MG962376	Mycobacterium phage Thumb, complete genome	22513-22544	11	0.656
NZ_CP047340_2	2.23\|711409\|32\|NZ_CP047340\|CRISPRCasFinder,CRT	711409-711440	32	KJ567046	Mycobacterium phage Damien, complete genome	22513-22544	11	0.656
NZ_CP047340_2	2.23\|711409\|32\|NZ_CP047340\|CRISPRCasFinder,CRT	711409-711440	32	MN010756	Mycobacterium phage Phreeze, complete genome	22513-22544	11	0.656
NZ_CP047340_2	2.23\|711409\|32\|NZ_CP047340\|CRISPRCasFinder,CRT	711409-711440	32	NC_023578	Mycobacterium phage Oaker, complete genome	22770-22801	11	0.656
NZ_CP047340_2	2.23\|711409\|32\|NZ_CP047340\|CRISPRCasFinder,CRT	711409-711440	32	MT521996	Mycobacterium phage Beckerton, complete genome	23050-23081	11	0.656
NZ_CP047340_2	2.23\|711409\|32\|NZ_CP047340\|CRISPRCasFinder,CRT	711409-711440	32	MH509445	Mycobacterium phage Cborch11, complete genome	22512-22543	11	0.656
NZ_CP047340_2	2.23\|711409\|32\|NZ_CP047340\|CRISPRCasFinder,CRT	711409-711440	32	NC_011292	Mycobacterium phage Konstantine, complete genome	23714-23745	11	0.656

1. spacer 2.13|710809|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to MK047642 (Phage NG55, complete genome) position: , mismatch: 0, identity: 1.0

gtattcaggctcaacggtgcgccactcaacaa	CRISPR spacer
gtattcaggctcaacggtgcgccactcaacaa	Protospacer
********************************

2. spacer 2.22|711349|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to MK047639 (Phage NGI4, complete genome) position: , mismatch: 0, identity: 1.0

agatggatattgcttttcctcctcacgagtaa	CRISPR spacer
agatggatattgcttttcctcctcacgagtaa	Protospacer
********************************

3. spacer 2.23|711409|32|NZ_CP047340|CRISPRCasFinder,CRT matches to MK047640 (Phage NV18, complete genome) position: , mismatch: 0, identity: 1.0

tattgcagtgaacacagccagcatgaatattg	CRISPR spacer
tattgcagtgaacacagccagcatgaatattg	Protospacer
********************************

4. spacer 3.1|720211|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KX832927 (Providencia rettgeri strain 16pre36 plasmid p16Pre36-NDM, complete sequence) position: , mismatch: 0, identity: 1.0

atagataaatatttatgttttctcattgaaat	CRISPR spacer
atagataaatatttatgttttctcattgaaat	Protospacer
********************************

5. spacer 3.1|720211|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MH491967 (Proteus mirabilis strain HFK418 plasmid pHFK418-NDM, complete sequence) position: , mismatch: 0, identity: 1.0

atagataaatatttatgttttctcattgaaat	CRISPR spacer
atagataaatatttatgttttctcattgaaat	Protospacer
********************************

6. spacer 3.15|721051|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MH491967 (Proteus mirabilis strain HFK418 plasmid pHFK418-NDM, complete sequence) position: , mismatch: 0, identity: 1.0

agtcaaactcataactaattctttttgttcgt	CRISPR spacer
agtcaaactcataactaattctttttgttcgt	Protospacer
********************************

7. spacer 2.8|710509|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to MK047640 (Phage NV18, complete genome) position: , mismatch: 1, identity: 0.969

tacaaacaaaatttaagaacgtatgcggaatg	CRISPR spacer
tacaaacaaaatttaagaacgtatgcagaatg	Protospacer
**************************.*****

8. spacer 2.8|710509|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to KY420199 (Proteus phage vB_PvuS_Pm34, complete genome) position: , mismatch: 1, identity: 0.969

tacaaacaaaatttaagaacgtatgcggaatg	CRISPR spacer
tacaaacaaaatttaagaacgtatgcagaatg	Protospacer
**************************.*****

9. spacer 2.12|710749|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to MK047642 (Phage NG55, complete genome) position: , mismatch: 1, identity: 0.969

atcagcatcacgtaaaaaacgggttgcgactt	CRISPR spacer
atcagcatcgcgtaaaaaacgggttgcgactt	Protospacer
*********.**********************

10. spacer 3.1|720211|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KX774387 (Providencia rettgeri strain 30905 plasmid pC131, complete sequence) position: , mismatch: 1, identity: 0.969

atagataaatatttatgttttctcattgaaat	CRISPR spacer
atagataaatatttatattttctcattgaaat	Protospacer
****************.***************

11. spacer 3.1|720211|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KX832929 (Providencia rettgeri strain 06-1619 plasmid p06-1619-1, complete sequence) position: , mismatch: 1, identity: 0.969

atagataaatatttatgttttctcattgaaat	CRISPR spacer
atagataaatatttatattttctcattgaaat	Protospacer
****************.***************

12. spacer 3.1|720211|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053895 (Proteus mirabilis strain JPM24 plasmid pJPM24, complete sequence) position: , mismatch: 1, identity: 0.969

atagataaatatttatgttttctcattgaaat	CRISPR spacer
atagataaatatttatattttctcattgaaat	Protospacer
****************.***************

13. spacer 3.1|720211|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047288 (Proteus cibarius strain G11 plasmid p152, complete sequence) position: , mismatch: 1, identity: 0.969

atagataaatatttatgttttctcattgaaat	CRISPR spacer
atagataaatatttatattttctcattgaaat	Protospacer
****************.***************

14. spacer 3.1|720211|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053372 (Proteus cibarius strain G32 plasmid pG32-177, complete sequence) position: , mismatch: 1, identity: 0.969

atagataaatatttatgttttctcattgaaat	CRISPR spacer
atagataaatatttatattttctcattgaaat	Protospacer
****************.***************

15. spacer 3.1|720211|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053043 (Proteus cibarius strain HNCF44W plasmid pHNCF44W_NDM-1, complete sequence) position: , mismatch: 1, identity: 0.969

atagataaatatttatgttttctcattgaaat	CRISPR spacer
atagataaatatttatattttctcattgaaat	Protospacer
****************.***************

16. spacer 3.1|720211|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to MG516912 (Proteus penneri plasmid pPp47, complete sequence) position: , mismatch: 1, identity: 0.969

atagataaatatttatgttttctcattgaaat	CRISPR spacer
atagataaatatttatattttctcattgaaat	Protospacer
****************.***************

17. spacer 3.1|720211|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to MG516911 (Proteus mirabilis plasmid pPm60, complete sequence) position: , mismatch: 1, identity: 0.969

atagataaatatttatgttttctcattgaaat	CRISPR spacer
atagataaatatttatattttctcattgaaat	Protospacer
****************.***************

18. spacer 3.1|720211|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045540 (Proteus mirabilis strain CRE14IB plasmid pIB_NDM_1, complete sequence) position: , mismatch: 1, identity: 0.969

atagataaatatttatgttttctcattgaaat	CRISPR spacer
atagataaatatttatattttctcattgaaat	Protospacer
****************.***************

19. spacer 3.1|720211|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to NC_022589 (Providencia rettgeri strain 09ACRGNY2001 plasmid pPrY2001, complete sequence) position: , mismatch: 1, identity: 0.969

atagataaatatttatgttttctcattgaaat	CRISPR spacer
atagataaatatttatattttctcattgaaat	Protospacer
****************.***************

20. spacer 3.1|720211|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047114 (Proteus mirabilis strain SCBX1.1 plasmid plas1.1.2, complete sequence) position: , mismatch: 1, identity: 0.969

atagataaatatttatgttttctcattgaaat	CRISPR spacer
atagataaatatttatattttctcattgaaat	Protospacer
****************.***************

21. spacer 3.1|720211|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053897 (Providencia rettgeri strain YPR31 plasmid pYPR31, complete sequence) position: , mismatch: 1, identity: 0.969

atagataaatatttatgttttctcattgaaat	CRISPR spacer
atagataaatatttatattttctcattgaaat	Protospacer
****************.***************

22. spacer 3.1|720211|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053899 (Proteus mirabilis strain YPM35 plasmid pJPM35-1, complete sequence) position: , mismatch: 1, identity: 0.969

atagataaatatttatgttttctcattgaaat	CRISPR spacer
atagataaatatttatattttctcattgaaat	Protospacer
****************.***************

23. spacer 3.2|720271|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to MK047642 (Phage NG55, complete genome) position: , mismatch: 1, identity: 0.969

atattatcttcacggccttgctttgtagattg	CRISPR spacer
atattatcttcacggccttgcttggtagattg	Protospacer
*********************** ********

24. spacer 3.7|720571|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to MW145137 (Providencia phage PSTNGR2lys, complete genome) position: , mismatch: 1, identity: 0.969

agttaacggtaataataaaggctcaatgcttt	CRISPR spacer
agttaacggaaataataaaggctcaatgcttt	Protospacer
********* **********************

25. spacer 3.10|720751|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to MK047642 (Phage NG55, complete genome) position: , mismatch: 1, identity: 0.969

tagcgggaaaaaccttaaccgatgtgcaaaaa	CRISPR spacer
tagcgggaaaaaccttaaccaatgtgcaaaaa	Protospacer
********************.***********

26. spacer 3.15|721051|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KX832927 (Providencia rettgeri strain 16pre36 plasmid p16Pre36-NDM, complete sequence) position: , mismatch: 1, identity: 0.969

agtcaaactcataactaattctttttgttcgt	CRISPR spacer
agtcaaactcataactaattccttttgttcgt	Protospacer
*********************.**********

27. spacer 2.7|710449|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to MK047642 (Phage NG55, complete genome) position: , mismatch: 2, identity: 0.938

atgaggcctgtgactctggcacaccgtaaacc	CRISPR spacer
atgaggcctgtgactcaggcacaccgtaaact	Protospacer
**************** **************.

28. spacer 2.11|710689|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to MK047642 (Phage NG55, complete genome) position: , mismatch: 2, identity: 0.938

taataccgcacgcctccattcattcagtgatg	CRISPR spacer
taatacagcacgcctccattcatttagtgatg	Protospacer
****** *****************.*******

29. spacer 2.21|711289|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to KY420199 (Proteus phage vB_PvuS_Pm34, complete genome) position: , mismatch: 2, identity: 0.938

aaagaacaggcacatcgattgcagcgaatacg	CRISPR spacer
aaagaacaggcacatccattgctgcgaatacg	Protospacer
**************** ***** *********

30. spacer 3.15|721051|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KX774387 (Providencia rettgeri strain 30905 plasmid pC131, complete sequence) position: , mismatch: 2, identity: 0.938

agtcaaactcataactaattctttttgttcgt	CRISPR spacer
ggttaaactcataactaattctttttgttcgt	Protospacer
.**.****************************

31. spacer 3.15|721051|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KX832929 (Providencia rettgeri strain 06-1619 plasmid p06-1619-1, complete sequence) position: , mismatch: 2, identity: 0.938

agtcaaactcataactaattctttttgttcgt	CRISPR spacer
ggttaaactcataactaattctttttgttcgt	Protospacer
.**.****************************

32. spacer 3.15|721051|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053895 (Proteus mirabilis strain JPM24 plasmid pJPM24, complete sequence) position: , mismatch: 2, identity: 0.938

agtcaaactcataactaattctttttgttcgt	CRISPR spacer
ggttaaactcataactaattctttttgttcgt	Protospacer
.**.****************************

33. spacer 3.15|721051|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047288 (Proteus cibarius strain G11 plasmid p152, complete sequence) position: , mismatch: 2, identity: 0.938

agtcaaactcataactaattctttttgttcgt	CRISPR spacer
ggttaaactcataactaattctttttgttcgt	Protospacer
.**.****************************

34. spacer 3.15|721051|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053372 (Proteus cibarius strain G32 plasmid pG32-177, complete sequence) position: , mismatch: 2, identity: 0.938

agtcaaactcataactaattctttttgttcgt	CRISPR spacer
ggttaaactcataactaattctttttgttcgt	Protospacer
.**.****************************

35. spacer 3.15|721051|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053043 (Proteus cibarius strain HNCF44W plasmid pHNCF44W_NDM-1, complete sequence) position: , mismatch: 2, identity: 0.938

agtcaaactcataactaattctttttgttcgt	CRISPR spacer
ggttaaactcataactaattctttttgttcgt	Protospacer
.**.****************************

36. spacer 3.15|721051|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to MG516912 (Proteus penneri plasmid pPp47, complete sequence) position: , mismatch: 2, identity: 0.938

agtcaaactcataactaattctttttgttcgt	CRISPR spacer
ggttaaactcataactaattctttttgttcgt	Protospacer
.**.****************************

37. spacer 3.15|721051|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to MG516911 (Proteus mirabilis plasmid pPm60, complete sequence) position: , mismatch: 2, identity: 0.938

agtcaaactcataactaattctttttgttcgt	CRISPR spacer
ggttaaactcataactaattctttttgttcgt	Protospacer
.**.****************************

38. spacer 3.15|721051|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045540 (Proteus mirabilis strain CRE14IB plasmid pIB_NDM_1, complete sequence) position: , mismatch: 2, identity: 0.938

agtcaaactcataactaattctttttgttcgt	CRISPR spacer
ggttaaactcataactaattctttttgttcgt	Protospacer
.**.****************************

39. spacer 3.15|721051|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to NC_022589 (Providencia rettgeri strain 09ACRGNY2001 plasmid pPrY2001, complete sequence) position: , mismatch: 2, identity: 0.938

agtcaaactcataactaattctttttgttcgt	CRISPR spacer
ggttaaactcataactaattctttttgttcgt	Protospacer
.**.****************************

40. spacer 3.15|721051|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047114 (Proteus mirabilis strain SCBX1.1 plasmid plas1.1.2, complete sequence) position: , mismatch: 2, identity: 0.938

agtcaaactcataactaattctttttgttcgt	CRISPR spacer
ggttaaactcataactaattctttttgttcgt	Protospacer
.**.****************************

41. spacer 3.15|721051|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053897 (Providencia rettgeri strain YPR31 plasmid pYPR31, complete sequence) position: , mismatch: 2, identity: 0.938

agtcaaactcataactaattctttttgttcgt	CRISPR spacer
ggttaaactcataactaattctttttgttcgt	Protospacer
.**.****************************

42. spacer 3.15|721051|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053899 (Proteus mirabilis strain YPM35 plasmid pJPM35-1, complete sequence) position: , mismatch: 2, identity: 0.938

agtcaaactcataactaattctttttgttcgt	CRISPR spacer
ggttaaactcataactaattctttttgttcgt	Protospacer
.**.****************************

43. spacer 2.2|710149|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to MK047640 (Phage NV18, complete genome) position: , mismatch: 3, identity: 0.906

atcatctgataactgttgcttacctaatgtag	CRISPR spacer
cacacctgataactgttgcttacctaatgtag	Protospacer
  **.***************************

44. spacer 2.9|710569|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to MN340231 (Escherichia phage phiv205-1, complete genome) position: , mismatch: 3, identity: 0.906

taactctgaaatatgggtgagctttaacccga	CRISPR spacer
gttctctgaaatatgggtgagctttaacccga	Protospacer
   *****************************

45. spacer 2.9|710569|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to MT813197 (Escherichia phage vB_EcoP_Kapi1, complete genome) position: , mismatch: 3, identity: 0.906

taactctgaaatatgggtgagctttaacccga	CRISPR spacer
gttctctgaaatatgggtgagctttaacccga	Protospacer
   *****************************

46. spacer 2.9|710569|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to MH717096 (Escherichia phage N7, complete genome) position: , mismatch: 3, identity: 0.906

taactctgaaatatgggtgagctttaacccga	CRISPR spacer
gttctctgaaatatgggtgagctttaacccga	Protospacer
   *****************************

47. spacer 2.9|710569|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to NC_005344 (Enterobacteria phage Sf6, complete genome) position: , mismatch: 3, identity: 0.906

taactctgaaatatgggtgagctttaacccga	CRISPR spacer
gttctctgaaatatgggtgagctttaacccga	Protospacer
   *****************************

48. spacer 2.2|710149|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to MW145137 (Providencia phage PSTNGR2lys, complete genome) position: , mismatch: 5, identity: 0.844

atcatctgataactgttgcttacctaatgtag	CRISPR spacer
ctcagtagacaactgttgcttacctaatgtag	Protospacer
 *** . **.**********************

49. spacer 2.9|710569|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to NC_002730 (Enterobacteria phage HK620, complete genome) position: , mismatch: 5, identity: 0.844

taactctgaaatatgggtgagctttaacccga	CRISPR spacer
attttccgaaatatgggtgagctttaacccga	Protospacer
   .**.*************************

50. spacer 2.9|710569|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to AF335538 (Bacteriophage HK620, complete genome) position: , mismatch: 5, identity: 0.844

taactctgaaatatgggtgagctttaacccga	CRISPR spacer
attttccgaaatatgggtgagctttaacccga	Protospacer
   .**.*************************

51. spacer 2.9|710569|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to MT833387 (Escherichia phage HF4s, complete genome) position: , mismatch: 5, identity: 0.844

taactctgaaatatgggtgagctttaacccga	CRISPR spacer
gttctctgaaatatgggtaagcttcaacccga	Protospacer
   ***************.*****.*******

52. spacer 2.4|710269|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to MN013086 (Klebsiella phage vB_Kpn_Chronis, complete genome) position: , mismatch: 6, identity: 0.812

gtaacttggagcaacgaaccaataaacgcccc	CRISPR spacer
gtgagcttgagaagcgaaccaataaacgcccc	Protospacer
**.* .* *** *.******************

53. spacer 2.9|710569|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to CP000711 (Enterobacteria phage CUS-3, complete genome) position: , mismatch: 6, identity: 0.812

taactctgaaatatgggtgagctttaacccga	CRISPR spacer
attttccgaaatatgggtgagcttcaacccga	Protospacer
   .**.*****************.*******

54. spacer 2.9|710569|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to KJ832078 (Enterobacteria phage Sf101, complete genome) position: , mismatch: 6, identity: 0.812

taactctgaaatatgggtgagctttaacccga	CRISPR spacer
gttttccgaaatatgggtgagctttaacccta	Protospacer
   .**.*********************** *

55. spacer 3.8|720631|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to MK977699 (Gordonia Phage Lollipop1437, complete genome) position: , mismatch: 6, identity: 0.812

atcacgccacacttcatcaatcaccg-gtgtca	CRISPR spacer
accacgccacacaccatcaatcaccatgtgcc-	Protospacer
*.********** .***********. ***.*

56. spacer 6.1|3867530|28|NZ_CP047340|CRISPRCasFinder matches to NZ_CP039965 (Pseudorhodobacter sp. S12M18 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.786

tggcggtggccacggtcacggtcattca	CRISPR spacer
aggcggtggccacgatcacgctcatggc	Protospacer
 *************.***** ****

57. spacer 6.1|3867530|28|NZ_CP047340|CRISPRCasFinder matches to NZ_AP014579 (Burkholderia sp. RPE67 plasmid p1, complete sequence) position: , mismatch: 6, identity: 0.786

tggcggtggccacggtcacggtcattca	CRISPR spacer
tggcgatggccacggtcacgggcacggc	Protospacer
*****.*************** **.

58. spacer 6.1|3867530|28|NZ_CP047340|CRISPRCasFinder matches to NC_016626 (Burkholderia sp. YI23 plasmid byi_1p, complete sequence) position: , mismatch: 6, identity: 0.786

tggcggtggccacggtcacggtcattca	CRISPR spacer
tggcgatggccacggtcacgggcacggc	Protospacer
*****.*************** **.

59. spacer 6.1|3867530|28|NZ_CP047340|CRISPRCasFinder matches to NC_016626 (Burkholderia sp. YI23 plasmid byi_1p, complete sequence) position: , mismatch: 6, identity: 0.786

tggcggtggccacggtcacggtcattca	CRISPR spacer
tggcgatggccacggtcacgggcacggc	Protospacer
*****.*************** **.

60. spacer 6.1|3867530|28|NZ_CP047340|CRISPRCasFinder matches to MN310546 (Microbacterium phage PhriedRice, complete genome) position: , mismatch: 6, identity: 0.786

tggcggtggccacggtcacggtcattca	CRISPR spacer
gggcggtggccacggtcaccgtccctgt	Protospacer
 ****************** *** .*

61. spacer 6.1|3867530|28|NZ_CP047340|CRISPRCasFinder matches to MT310890 (Microbacterium phage Phedro, complete genome) position: , mismatch: 6, identity: 0.786

tggcggtggccacggtcacggtcattca	CRISPR spacer
gggcggtggccacggtcaccgtccctgt	Protospacer
 ****************** *** .*

62. spacer 6.1|3867530|28|NZ_CP047340|CRISPRCasFinder matches to MT310889 (Microbacterium phage Phractured, complete genome) position: , mismatch: 6, identity: 0.786

tggcggtggccacggtcacggtcattca	CRISPR spacer
gggcggtggccacggtcaccgtccctgt	Protospacer
 ****************** *** .*

63. spacer 6.1|3867530|28|NZ_CP047340|CRISPRCasFinder matches to MT310891 (Microbacterium phage Pharky, complete genome) position: , mismatch: 6, identity: 0.786

tggcggtggccacggtcacggtcattca	CRISPR spacer
gggcggtggccacggtcaccgtccctgt	Protospacer
 ****************** *** .*

64. spacer 6.1|3867530|28|NZ_CP047340|CRISPRCasFinder matches to CP040467 (Streptomyces albidoflavus strain UYFA156 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.786

tggcggtggccacggtcacggtcattca	CRISPR spacer
tggcggtgaccacggtctcggtcggccc	Protospacer
********.******** *****. .*

65. spacer 2.9|710569|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to MN856055 (Myoviridae sp. isolate 330, complete genome) position: , mismatch: 7, identity: 0.781

taactctgaaatatgggtgagctttaacccga	CRISPR spacer
catgtctgaaatatgggtgacatttaaccctg	Protospacer
.*  ****************  ******** .

66. spacer 3.1|720211|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to NC_019765 (Stanieria cyanosphaera PCC 7437 plasmid pSTA7437.01, complete sequence) position: , mismatch: 7, identity: 0.781

atagataaatatttatgttttctcattgaaat	CRISPR spacer
ataaataaatatttacgttttcttaatattat	Protospacer
***.***********.*******.* *.  **

67. spacer 3.1|720211|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to AP014146 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C4B-MedDCM-OCT-S30-C112, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 7, identity: 0.781

atagataaatatttatgttttctcattgaaat	CRISPR spacer
atagaaaaatatttatgtgttctactccaact	Protospacer
***** ************ ****  *. ** *

68. spacer 3.1|720211|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to AP014142 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C4B-MedDCM-OCT-S23-C187, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 7, identity: 0.781

atagataaatatttatgttttctcattgaaat	CRISPR spacer
atagaaaaatatttatgtgttctactccaact	Protospacer
***** ************ ****  *. ** *

69. spacer 3.1|720211|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to AP014149 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C4B-MedDCM-OCT-S34-C126, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 7, identity: 0.781

atagataaatatttatgttttctcattgaaat	CRISPR spacer
atagaaaaatatttatgtgttctactccaact	Protospacer
***** ************ ****  *. ** *

70. spacer 3.1|720211|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to AP014143 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C4B-MedDCM-OCT-S24-C76, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 7, identity: 0.781

atagataaatatttatgttttctcattgaaat	CRISPR spacer
atagaaaaatatttatgtgttctactccaact	Protospacer
***** ************ ****  *. ** *

71. spacer 3.1|720211|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to AP014148 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C4B-MedDCM-OCT-S32-C91, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 7, identity: 0.781

atagataaatatttatgttttctcattgaaat	CRISPR spacer
atagaaaaatatttatgtgttctactccaact	Protospacer
***** ************ ****  *. ** *

72. spacer 3.1|720211|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to AP014153 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C4B-MedDCM-OCT-S44-C323, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 7, identity: 0.781

atagataaatatttatgttttctcattgaaat	CRISPR spacer
atagaaaaatatttatgtgttctactccaact	Protospacer
***** ************ ****  *. ** *

73. spacer 3.1|720211|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to AP014144 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C4B-MedDCM-OCT-S25-C77, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 7, identity: 0.781

atagataaatatttatgttttctcattgaaat	CRISPR spacer
atagaaaaatatttatgtgttctactccaact	Protospacer
***** ************ ****  *. ** *

74. spacer 3.1|720211|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to GU943033 (Uncultured phage MedDCM-OCT-S08-C1731 genomic sequence) position: , mismatch: 7, identity: 0.781

atagataaatatttatgttttctcattgaaat	CRISPR spacer
atagaaaaatatttatgtgttctactccaact	Protospacer
***** ************ ****  *. ** *

75. spacer 3.9|720691|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to MW057859 (Providencia phage PSTCR8lys, complete genome) position: , mismatch: 7, identity: 0.781

gcctgaggtggcaaaataatcaggctcaatat	CRISPR spacer
gcctgatgtggctaaataatcaggcaaccttt	Protospacer
****** ***** ************    * *

76. spacer 3.15|721051|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to NC_021594 (Serratia plymuthica 4Rx13 plasmid p75, complete sequence) position: , mismatch: 7, identity: 0.781

agtcaaactcataactaattctttttgttcgt	CRISPR spacer
agtcaaactcatcacgaattctttgagctgat	Protospacer
************ ** ********  *.* .*

77. spacer 3.15|721051|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to NC_013085 (Synechococcus phage S-RSM4, complete genome) position: , mismatch: 7, identity: 0.781

agtcaaactcataactaattctttttgttcgt	CRISPR spacer
attcaaactcatctctaattcttttctttact	Protospacer
* **********  ***********. **  *

78. spacer 3.15|721051|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to FM207411 (Synechococcus phage S-RSM4 complete genome) position: , mismatch: 7, identity: 0.781

agtcaaactcataactaattctttttgttcgt	CRISPR spacer
attcaaactcatctctaattcttttctttact	Protospacer
* **********  ***********. **  *

79. spacer 6.1|3867530|28|NZ_CP047340|CRISPRCasFinder matches to NZ_AP014579 (Burkholderia sp. RPE67 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.75

tggcggtggccacggtcacggtcattca	CRISPR spacer
tggcggtggcctcgctcacggtcgcgac	Protospacer
*********** ** ********..

80. spacer 6.1|3867530|28|NZ_CP047340|CRISPRCasFinder matches to NZ_AP014579 (Burkholderia sp. RPE67 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.75

tggcggtggccacggtcacggtcattca	CRISPR spacer
tggcgatggccacggtcacggcgacggt	Protospacer
*****.***************. *.

81. spacer 6.1|3867530|28|NZ_CP047340|CRISPRCasFinder matches to NC_016626 (Burkholderia sp. YI23 plasmid byi_1p, complete sequence) position: , mismatch: 7, identity: 0.75

tggcggtggccacggtcacggtcattca	CRISPR spacer
tggcggtggcctcgctcacggtcgcgac	Protospacer
*********** ** ********..

82. spacer 6.1|3867530|28|NZ_CP047340|CRISPRCasFinder matches to NZ_AP022319 (Burkholderia sp. THE68 plasmid BTHE68_p1, complete sequence) position: , mismatch: 7, identity: 0.75

tggcggtggccacggtcacggtcattca	CRISPR spacer
cggcgatggccatggtcacggtcacggc	Protospacer
.****.******.***********.

83. spacer 6.1|3867530|28|NZ_CP047340|CRISPRCasFinder matches to NZ_CP021115 (Rhodobacteraceae bacterium strain G7 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.75

tggcggtggccacggtcacggtcattca	CRISPR spacer
atgcggtggccacgatcacgctcatcgc	Protospacer
  ************.***** ****.

84. spacer 2.4|710269|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038654 (Citrobacter freundii strain 154 plasmid p154_1, complete sequence) position: , mismatch: 8, identity: 0.75

gtaactt--ggagcaacgaaccaataaacgcccc	CRISPR spacer
--gatttggggagcaacggaacaataaacgccgt	Protospacer
  .*.**  *********.* *********** .

85. spacer 2.4|710269|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038659 (Citrobacter freundii strain 680 plasmid p680_1, complete sequence) position: , mismatch: 8, identity: 0.75

gtaactt--ggagcaacgaaccaataaacgcccc	CRISPR spacer
--gatttggggagcaacggaacaataaacgccgt	Protospacer
  .*.**  *********.* *********** .

86. spacer 2.7|710449|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021357 (Rhodococcus sp. S2-17 plasmid pRB11, complete sequence) position: , mismatch: 8, identity: 0.75

atgaggcctgtgactctggcacaccg---taaacc	CRISPR spacer
gtcaggcctgtgtctctggcacatcggtttag---	Protospacer
.* ********* **********.**   **.

87. spacer 2.9|710569|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to MN693421 (Marine virus AFVG_25M197, complete genome) position: , mismatch: 8, identity: 0.75

taactctgaaatatgggtgagctttaacccga	CRISPR spacer
ttactcagaaatatgggtcagctttgaaactt	Protospacer
* **** *********** ******.*  *

88. spacer 2.17|711049|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to NC_027352 (Bacillus phage JBP901, complete genome) position: , mismatch: 8, identity: 0.75

tttatcctgcataattacaggaatgttagagt	CRISPR spacer
gtaaagattcatttttacaggaatgttagagt	Protospacer
 * *   * ***  ******************

89. spacer 3.9|720691|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to NC_010631 (Nostoc punctiforme PCC 73102 plasmid pNPUN01, complete sequence) position: , mismatch: 8, identity: 0.75

gcctgaggtggcaaaataatcaggctcaatat	CRISPR spacer
ttcaggtttggcaatataatcaagctcaatat	Protospacer
 .* *.  ****** *******.*********

90. spacer 3.11|720811|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to MK448399 (Streptococcus satellite phage Javan283, complete genome) position: , mismatch: 8, identity: 0.75

atataaacctatttttgagcgtttatttttat	CRISPR spacer
agattcgcctatttttaaacgtttatttttgc	Protospacer
* **  .*********.*.***********..

91. spacer 3.11|720811|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to MK448396 (Streptococcus satellite phage Javan280, complete genome) position: , mismatch: 8, identity: 0.75

atataaacctatttttgagcgtttatttttat	CRISPR spacer
agattcgcctatttttaaacgtttatttttgc	Protospacer
* **  .*********.*.***********..

92. spacer 3.11|720811|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to MK448398 (Streptococcus satellite phage Javan282, complete genome) position: , mismatch: 8, identity: 0.75

atataaacctatttttgagcgtttatttttat	CRISPR spacer
agattcgcctatttttaaacgtttatttttgc	Protospacer
* **  .*********.*.***********..

93. spacer 3.11|720811|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to MK448394 (Streptococcus satellite phage Javan277, complete genome) position: , mismatch: 8, identity: 0.75

atataaacctatttttgagcgtttatttttat	CRISPR spacer
agattcgcctatttttaaacgtttatttttgc	Protospacer
* **  .*********.*.***********..

94. spacer 3.11|720811|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to MK448397 (Streptococcus satellite phage Javan281, complete genome) position: , mismatch: 8, identity: 0.75

atataaacctatttttgagcgtttatttttat	CRISPR spacer
agattcgcctatttttaaacgtttatttttgc	Protospacer
* **  .*********.*.***********..

95. spacer 6.1|3867530|28|NZ_CP047340|CRISPRCasFinder matches to NZ_CP041158 (Leisingera aquaemixtae strain R2C4 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.714

tggcggtggccacggtcacggtcattca	CRISPR spacer
gatcggcggccacggtcacggtcacgac	Protospacer
 . ***.*****************.

96. spacer 6.1|3867530|28|NZ_CP047340|CRISPRCasFinder matches to NC_017957 (Tistrella mobilis KA081020-065 plasmid pTM1, complete sequence) position: , mismatch: 8, identity: 0.714

tggcggtggccacggtcacggtcattca	CRISPR spacer
cggcggtggccgcggtcacggtggcggg	Protospacer
.**********.********** ..  .

97. spacer 2.3|710209|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045959 (Salmonella enterica subsp. enterica serovar Birkenhead strain AUSMDU00010532 plasmid pAUSMDU00010532_01, complete sequence) position: , mismatch: 9, identity: 0.719

aagaaggtttagcaccatcagttgatgagaaa	CRISPR spacer
aattttaaatagcacaatcagtttatgagaaa	Protospacer
**    .  ****** ******* ********

98. spacer 2.8|710509|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to MT773555 (Myoviridae sp. isolate BML_3 genomic sequence) position: , mismatch: 9, identity: 0.719

tacaaacaaaatttaagaacgtatgcggaatg	CRISPR spacer
tttctttaaaatttaagaatgtatgcggtata	Protospacer
* .   .************.******** **.

99. spacer 2.23|711409|32|NZ_CP047340|CRISPRCasFinder,CRT matches to NZ_CP010738 (Phaeobacter inhibens strain P72 plasmid pP72_c, complete sequence) position: , mismatch: 9, identity: 0.719

tattgcagtgaacacagccagcatgaatattg	CRISPR spacer
cagtgcagtgaacccacccagcatgaccagca	Protospacer
.* ********** ** ********* .* ..

100. spacer 3.1|720211|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023318 (Bacillus megaterium strain A plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.719

atagataaatatttatgttttctcattgaaat	CRISPR spacer
acttataaatatttatgttttattatttactc	Protospacer
*.  ***************** *.*** *  .

101. spacer 3.1|720211|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040366 (Bacillus flexus isolate 1-2-1 plasmid punnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

atagataaatatttatgttttctcattgaaat	CRISPR spacer
acttataaatatttatgttttattatttactc	Protospacer
*.  ***************** *.*** *  .

102. spacer 3.1|720211|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to NC_015512 (Haliscomenobacter hydrossis DSM 1100 plasmid pHALHY02, complete sequence) position: , mismatch: 9, identity: 0.719

atagataaatatttatgttttctcattgaaat	CRISPR spacer
tcagttaaatatttatattttctcaaactatt	Protospacer
 .** ***********.********    * *

103. spacer 3.8|720631|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025812 (Sulfitobacter sp. SK025 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.719

atcacgccacacttcatcaatcaccggtgtca	CRISPR spacer
cgtgcgcgacacttcatcaataaccggtagaa	Protospacer
  ..*** ************* ******.  *

104. spacer 3.11|720811|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP048880 (Oceanospirillales bacterium S2-4-1H plasmid pB, complete sequence) position: , mismatch: 9, identity: 0.719

atataaacctatttttgagcgtttatttttat	CRISPR spacer
gtacgtttctatccttgagcgtttatttttaa	Protospacer
.**..  .****..*****************

105. spacer 3.13|720931|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020413 (Leptospira interrogans serovar Copenhageni strain FDAARGOS_203 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tacaagattttgcgcttctaaaacttcgttga	CRISPR spacer
ctcaggattttccgcttctaaaactgctaagt	Protospacer
. **.****** ************* *   *

106. spacer 2.7|710449|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032349 (Azospirillum brasilense strain MTCC4039 plasmid p3, complete sequence) position: , mismatch: 10, identity: 0.688

atgaggcctgtgactctggcacaccgtaaacc	CRISPR spacer
gatcatcccgtcactctggcacaccgtaacgc	Protospacer
.   . **.** *****************  *

107. spacer 3.3|720331|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to NC_010815 (Geobacter lovleyi SZ plasmid pGLOV01, complete sequence) position: , mismatch: 10, identity: 0.688

attagtgaatgtgcccaggcgaaaattaatcg	CRISPR spacer
attgctgaatgtgcccaggcgaaggccgaatt	Protospacer
***. ******************.....* .

108. spacer 3.13|720931|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053846 (Campylobacter sp. CCUG 57310 plasmid pCORI-1, complete sequence) position: , mismatch: 10, identity: 0.688

tacaagattttgcgcttctaaaacttcgttga	CRISPR spacer
atccctattttgcacttctaaaacttggtgtg	Protospacer
  *   *******.************ **  .

109. spacer 3.15|721051|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039840 (Escherichia coli O157:H7 strain USDA5905 plasmid pUSDA5905_4, complete sequence) position: , mismatch: 10, identity: 0.688

agtcaaactcataactaattctttttgttcgt	CRISPR spacer
aagattttccataactaatattttttgttcgt	Protospacer
*.     ..********** .***********

110. spacer 3.15|721051|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP051742 (Escherichia coli strain SCU-105 plasmid pSCU-105-4, complete sequence) position: , mismatch: 10, identity: 0.688

agtcaaactcataactaattctttttgttcgt	CRISPR spacer
aagattttccataactaatattttttgttcgt	Protospacer
*.     ..********** .***********

111. spacer 2.23|711409|32|NZ_CP047340|CRISPRCasFinder,CRT matches to MG962376 (Mycobacterium phage Thumb, complete genome) position: , mismatch: 11, identity: 0.656

tattgcagtgaacacagccagcatgaatattg	CRISPR spacer
gtttgcagtgaagaccgccagcatgggagcga	Protospacer
  ********** ** *********.. .. .

112. spacer 2.23|711409|32|NZ_CP047340|CRISPRCasFinder,CRT matches to KJ567046 (Mycobacterium phage Damien, complete genome) position: , mismatch: 11, identity: 0.656

tattgcagtgaacacagccagcatgaatattg	CRISPR spacer
gtttgcagtgaagaccgccagcatgggagcga	Protospacer
  ********** ** *********.. .. .

113. spacer 2.23|711409|32|NZ_CP047340|CRISPRCasFinder,CRT matches to MN010756 (Mycobacterium phage Phreeze, complete genome) position: , mismatch: 11, identity: 0.656

tattgcagtgaacacagccagcatgaatattg	CRISPR spacer
gtttgcagtgaagaccgccagcatgggagcga	Protospacer
  ********** ** *********.. .. .

114. spacer 2.23|711409|32|NZ_CP047340|CRISPRCasFinder,CRT matches to NC_023578 (Mycobacterium phage Oaker, complete genome) position: , mismatch: 11, identity: 0.656

tattgcagtgaacacagccagcatgaatattg	CRISPR spacer
gtttgcagtgaagaccgccagcatgggagcga	Protospacer
  ********** ** *********.. .. .

115. spacer 2.23|711409|32|NZ_CP047340|CRISPRCasFinder,CRT matches to MT521996 (Mycobacterium phage Beckerton, complete genome) position: , mismatch: 11, identity: 0.656

tattgcagtgaacacagccagcatgaatattg	CRISPR spacer
gtttgcagtgaagaccgccagcatgggagcga	Protospacer
  ********** ** *********.. .. .

116. spacer 2.23|711409|32|NZ_CP047340|CRISPRCasFinder,CRT matches to MH509445 (Mycobacterium phage Cborch11, complete genome) position: , mismatch: 11, identity: 0.656

tattgcagtgaacacagccagcatgaatattg	CRISPR spacer
gtttgcagtgaagaccgccagcatgggagcga	Protospacer
  ********** ** *********.. .. .

117. spacer 2.23|711409|32|NZ_CP047340|CRISPRCasFinder,CRT matches to NC_011292 (Mycobacterium phage Konstantine, complete genome) position: , mismatch: 11, identity: 0.656

tattgcagtgaacacagccagcatgaatattg	CRISPR spacer
gtttgcagtgaagaccgccagcatgggagcga	Protospacer
  ********** ** *********.. .. .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

398869 : 495979

Enterobacteria_phage(24.49%)

integrase,tail,terminase,tRNA,lysis,plate,protease,portal

attL 415979:416002|attR 459723:459746

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_075673935.1\|398869_399499_-\|protease	multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1	NA	NA	NA	NA
WP_075673936.1\|399469_400156_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.6e-31	34.8
WP_156733951.1\|400152_402594_+	FtsX-like permease family protein	NA	NA	NA	NA
WP_099660128.1\|402682_404845_-	ornithine decarboxylase	NA	NA	NA	NA
WP_075673939.1\|405021_406047_-	mechanosensitive ion channel family protein	NA	NA	NA	NA
WP_156733950.1\|406114_407374_-	MFS transporter	NA	NA	NA	NA
WP_156733948.1\|407497_408565_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
WP_075673942.1\|408561_409083_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	NA	NA	NA
WP_075673943.1\|409217_409940_-	UDP-2,3-diacylglucosamine diphosphatase	NA	NA	NA	NA
WP_036934689.1\|409952_410447_-	peptidylprolyl isomerase B	NA	NA	NA	NA
WP_075673944.1\|410822_412214_+\|tRNA	cysteine--tRNA ligase	A0A2K9L6B7	Tupanvirus	4.7e-38	32.3
WP_075673945.1\|412303_412747_-	hypothetical protein	NA	NA	NA	NA
WP_075673946.1\|412981_413923_-	1-phosphofructokinase	NA	NA	NA	NA
WP_075673947.1\|414575_414788_-	ribosome-associated protein YbcJ	NA	NA	NA	NA
WP_075673948.1\|414791_415664_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	5.7e-34	36.8
415979:416002	attL	NA	NA	NA	NA
WP_156733946.1\|416007_416196_-	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_164530182.1\|416249_416732_-	class I SAM-dependent methyltransferase	A0A1W6JP48	Morganella_phage	2.1e-70	78.6
WP_156733945.1\|416706_417069_-	DUF2591 family protein	E9NID9	Enterobacter_phage	1.2e-25	54.7
WP_156733943.1\|417481_418162_-	hypothetical protein	NA	NA	NA	NA
WP_156733941.1\|418230_418728_-	single-stranded DNA-binding protein	Q1MVN2	Enterobacteria_phage	3.0e-48	62.3
WP_156733939.1\|418786_419614_-	DUF2303 family protein	A0A2R2Z323	Escherichia_phage	8.5e-80	56.2
WP_006533955.1\|419679_420054_-	hypothetical protein	Q8HAA1	Salmonella_phage	4.6e-41	69.7
WP_072070916.1\|420273_420477_-	hypothetical protein	NA	NA	NA	NA
WP_135022259.1\|420586_421234_-	helix-turn-helix domain-containing protein	A0A1W6JP50	Morganella_phage	1.1e-63	62.7
WP_135022261.1\|421339_421534_+	hypothetical protein	A0A1W6JP24	Morganella_phage	2.9e-15	63.9
WP_135022262.1\|421572_422031_+	hypothetical protein	A0A1W6JP72	Morganella_phage	1.3e-26	45.4
WP_098943307.1\|422119_422329_+	hypothetical protein	NA	NA	NA	NA
WP_099659597.1\|422318_422498_+	DUF4222 domain-containing protein	A0A1W6JP38	Morganella_phage	4.7e-12	56.9
WP_036901003.1\|422510_423572_+	replication protein	H2DE83	Erwinia_phage	5.1e-29	54.4
WP_156733937.1\|423571_424210_+	phage N-6-adenine-methyltransferase	K7PGU4	Enterobacteria_phage	2.0e-81	65.2
WP_036904905.1\|424206_424599_+	hypothetical protein	NA	NA	NA	NA
WP_023582529.1\|424598_424769_+	hypothetical protein	NA	NA	NA	NA
WP_036904907.1\|424831_425215_+	RusA family crossover junction endodeoxyribonuclease	A0A1C9IIA0	Salmonella_phage	1.7e-27	53.7
WP_156733236.1\|425233_426040_+	KilA-N domain-containing protein	A0A1W6JP13	Morganella_phage	8.8e-90	62.1
WP_156733936.1\|426036_427062_+	DUF968 domain-containing protein	A0A1W6JP62	Morganella_phage	6.4e-85	45.6
WP_135022270.1\|427090_427474_+	antitermination protein	A0A088CD47	Shigella_phage	1.8e-48	69.0
WP_156733934.1\|427714_428881_+	5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase	A0A218MNE0	uncultured_virus	7.3e-85	43.3
WP_156733932.1\|428993_429152_+	hypothetical protein	NA	NA	NA	NA
WP_072065159.1\|429356_429605_+	hypothetical protein	NA	NA	NA	NA
WP_036904926.1\|429945_430215_+	bacteriophage protein	A0A2H4FNF0	Salmonella_phage	5.7e-17	47.7
WP_109850081.1\|430214_430685_+	lysozyme	A0A1W6JNW4	Morganella_phage	1.7e-48	58.6
WP_164530183.1\|430666_430825_+	hypothetical protein	NA	NA	NA	NA
WP_036904932.1\|430827_431310_+\|lysis	lysis protein	A0A1P8DTG0	Proteus_phage	1.4e-42	83.5
WP_036904935.1\|431549_431753_-	KTSC domain-containing protein	NA	NA	NA	NA
WP_156733931.1\|432441_432861_+	hypothetical protein	A0A1P8DTD7	Proteus_phage	1.2e-42	71.2
WP_156733929.1\|432897_433392_-	hypothetical protein	NA	NA	NA	NA
WP_156733927.1\|433799_434336_+	Rha family transcriptional regulator	A0A0P0ZFJ1	Escherichia_phage	1.2e-63	64.6
WP_156733925.1\|434451_434946_+	DUF1441 family protein	A0A291AWV8	Escherichia_phage	1.5e-47	65.0
WP_156733923.1\|434942_437045_+\|terminase	phage terminase large subunit family protein	A0A291AWY5	Escherichia_phage	7.7e-295	69.0
WP_004247869.1\|437041_437257_+	hypothetical protein	A5LH28	Enterobacteria_phage	1.2e-17	64.3
WP_156733921.1\|437253_438744_+\|portal	phage portal protein	K7PHM5	Enterobacterial_phage	1.9e-191	66.9
WP_156733919.1\|438709_440701_+\|protease	Clp protease ClpP	S5M7Q8	Escherichia_phage	1.8e-248	64.5
WP_156733917.1\|440789_441131_+	DUF2190 family protein	Q9EYD5	Enterobacteria_phage	1.5e-19	50.0
WP_156733915.1\|441142_441415_+	ATP-binding protein	K7PH43	Enterobacteria_phage	1.6e-14	43.8
WP_156733913.1\|441424_441988_+\|tail	phage tail protein	K7PMB7	Enterobacterial_phage	6.2e-50	57.1
WP_164530211.1\|441987_442383_+\|tail	phage tail protein	A0A2R9YJI2	Escherichia_phage	2.6e-42	60.3
WP_156733910.1\|442394_442916_+\|tail	phage tail protein	M9NYX0	Enterobacteria_phage	7.0e-64	74.0
WP_156733909.1\|442927_443317_+\|tail	phage minor tail protein G	K7PJY4	Enterobacterial_phage	8.5e-14	36.5
WP_156733907.1\|443337_443658_+\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	1.5e-16	42.5
WP_156733905.1\|443626_446644_+\|tail	phage tail tape measure protein	E4WL33	Enterobacteria_phage	1.1e-103	30.9
WP_156733903.1\|446643_446973_+\|tail	phage tail protein	A0A0K2FIE9	Enterobacteria_phage	4.3e-27	54.6
WP_156733902.1\|447013_447910_+	hypothetical protein	NA	NA	NA	NA
WP_156733900.1\|447987_448563_+	hypothetical protein	I6PDJ9	Cronobacter_phage	3.4e-19	48.5
WP_156733898.1\|448616_449321_+\|tail	phage minor tail protein L	A5LH40	Enterobacteria_phage	6.4e-68	51.5
WP_156733897.1\|449342_450071_+\|tail	phage tail protein	Q6H9T4	Enterobacteria_phage	1.2e-88	61.5
WP_156734468.1\|450040_450625_+\|tail	tail assembly protein	K7PH50	Enterobacteria_phage	6.9e-44	48.0
WP_156733895.1\|450639_454392_+	DUF1983 domain-containing protein	A0A0P0ZBW1	Stx2-converting_phage	5.6e-280	53.0
WP_156733893.1\|456532_458089_-	HAMP domain-containing protein	NA	NA	NA	NA
WP_099659261.1\|458470_459697_-\|integrase	site-specific integrase	A0A248SL35	Klebsiella_phage	1.5e-35	30.2
WP_075674158.1\|460393_460933_+	hypothetical protein	NA	NA	NA	NA
459723:459746	attR	NA	NA	NA	NA
WP_075674159.1\|461078_461387_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_099659263.1\|461749_462259_-	DUF523 domain-containing protein	NA	NA	NA	NA
WP_099659264.1\|462458_462878_+	hypothetical protein	NA	NA	NA	NA
WP_156733891.1\|463369_464785_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_075674163.1\|465059_465587_+	hypothetical protein	NA	NA	NA	NA
WP_075674116.1\|466106_466400_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_075674117.1\|466543_467275_-	ankyrin repeat domain-containing protein	A0A0G2Y7V3	Acanthamoeba_polyphaga_mimivirus	6.5e-07	33.8
WP_156733889.1\|467690_468311_-	hypothetical protein	NA	NA	NA	NA
WP_156733887.1\|468321_469704_-	hypothetical protein	NA	NA	NA	NA
WP_075674113.1\|469783_470218_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_099659268.1\|470220_470784_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_156733885.1\|470758_471856_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_109419415.1\|471819_473583_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_109419414.1\|473615_475238_-	type VI secretion system protein TssA	NA	NA	NA	NA
WP_156733883.1\|475283_478607_-	type VI secretion protein VasK	NA	NA	NA	NA
WP_156733882.1\|478606_480004_-	hypothetical protein	NA	NA	NA	NA
WP_075674106.1\|480004_480259_-	PAAR domain-containing protein	NA	NA	NA	NA
WP_156733880.1\|480297_482436_-	hypothetical protein	A0A077K801	Ralstonia_phage	1.1e-30	30.1
WP_156733878.1\|482447_483185_-	hypothetical protein	NA	NA	NA	NA
WP_156733877.1\|483238_484510_-	hypothetical protein	A0A077K801	Ralstonia_phage	4.2e-09	21.5
WP_156733875.1\|484660_485377_-	hypothetical protein	A0A077K801	Ralstonia_phage	1.8e-09	38.7
WP_156733873.1\|485455_486223_-	hypothetical protein	NA	NA	NA	NA
WP_156733869.1\|488747_491459_-	type VI secretion system ATPase TssH	K4FB40	Cronobacter_phage	8.9e-94	30.8
WP_023583757.1\|491744_492236_-	Hcp family type VI secretion system effector	NA	NA	NA	NA
WP_075674253.1\|492258_493998_-	OmpA family protein	NA	NA	NA	NA
WP_156733868.1\|493976_494645_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_156733866.1\|494641_495979_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA

DBSCAN-SWA_2

935191 : 941591

Enterobacteria_phage(37.5%)

lysis,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_088495150.1\|935191_935929_-	helix-turn-helix transcriptional regulator	A0A088CBP2	Shigella_phage	1.4e-57	45.9
WP_156733706.1\|936170_936986_+	antitermination protein	M9NZB0	Enterobacteria_phage	3.4e-57	43.5
WP_088495157.1\|937348_937657_+\|holin	phage holin, lambda family	A0A1P8DTE4	Proteus_phage	5.3e-27	54.5
WP_156733704.1\|937649_938054_+	structural protein	A0A0E3JJ20	Enterobacteria_phage	2.6e-26	47.3
WP_156733702.1\|938050_938500_+\|lysis	lysis protein	M1FJ79	Enterobacteria_phage	4.3e-09	29.7
WP_088495160.1\|938597_939110_+	hypothetical protein	NA	NA	NA	NA
WP_156733700.1\|939118_940606_+	DUF3383 family protein	Q6IWV2	Burkholderia_phage	1.5e-58	30.8
WP_075674211.1\|940616_941069_+	hypothetical protein	B5M9T3	Pseudomonas_phage	1.1e-12	33.8
WP_156733698.1\|941132_941591_+	hypothetical protein	Q6IWV4	Burkholderia_phage	1.3e-24	47.6

DBSCAN-SWA_3

1158036 : 1188695

Salmonella_phage(26.92%)

integrase,tail,terminase

attL 1153245:1153260|attR 1168447:1168462

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1153245:1153260	attL	NA	NA	NA	NA
WP_075671849.1\|1158036_1159503_+	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	2.3e-88	38.3
WP_098942517.1\|1159604_1161182_+	glutamine-hydrolyzing GMP synthase	NA	NA	NA	NA
WP_156733580.1\|1161400_1162597_+\|integrase	tyrosine-type recombinase/integrase	T1S9J3	Salmonella_phage	4.8e-140	61.9
WP_004250848.1\|1162604_1162793_-	hypothetical protein	NA	NA	NA	NA
WP_156733578.1\|1162792_1162990_-	hypothetical protein	A0A1P8DTH3	Proteus_phage	5.8e-19	65.1
WP_112843754.1\|1162992_1163634_-	DNA methyltransferase	I6PDF5	Cronobacter_phage	2.3e-72	61.1
WP_156733576.1\|1163630_1163810_-	hypothetical protein	NA	NA	NA	NA
WP_156733574.1\|1163861_1164392_-	hypothetical protein	NA	NA	NA	NA
WP_156733572.1\|1164461_1164995_-	hypothetical protein	J9Q748	Salmonella_phage	8.8e-38	46.3
WP_004250862.1\|1165082_1165340_-	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_156733570.1\|1165384_1166425_-	enterohemolysin	H6WRX0	Salmonella_phage	7.9e-99	50.1
WP_156733568.1\|1166470_1168192_-	DNA breaking-rejoining protein	H6WRX1	Salmonella_phage	2.4e-108	51.6
WP_004243375.1\|1168178_1168340_-	hypothetical protein	NA	NA	NA	NA
WP_072068383.1\|1168588_1169197_-	DNA-binding protein	A0A0F6R8L7	Escherichia_coli_O157_typing_phage	1.5e-28	35.4
1168447:1168462	attR	NA	NA	NA	NA
WP_156733566.1\|1169274_1169553_+	hypothetical protein	NA	NA	NA	NA
WP_004243371.1\|1169692_1169878_+	hypothetical protein	A0A0F6TJB7	Escherichia_coli_O157_typing_phage	6.0e-10	50.8
WP_036976826.1\|1169888_1170731_+	hypothetical protein	A0A0D4DBT2	Acinetobacter_phage	3.8e-51	59.7
WP_004243368.1\|1170730_1171456_+	ATP-binding protein	A0A1W6JP39	Morganella_phage	6.7e-105	78.8
WP_156733565.1\|1171702_1172116_+	hypothetical protein	NA	NA	NA	NA
WP_049203709.1\|1172112_1172508_+	RusA family crossover junction endodeoxyribonuclease	G8C7V6	Escherichia_phage	5.2e-35	60.9
WP_156733563.1\|1172627_1173059_+	hypothetical protein	NA	NA	NA	NA
WP_156733562.1\|1173118_1173460_+	hypothetical protein	H9C172	Pectobacterium_phage	1.6e-29	58.1
WP_156733560.1\|1173488_1174139_+	hypothetical protein	NA	NA	NA	NA
WP_156733558.1\|1174182_1174752_+\|terminase	terminase small subunit	G9L6B7	Escherichia_phage	3.7e-42	47.5
WP_156733556.1\|1174751_1176236_+\|terminase	terminase	G9L6B8	Escherichia_phage	1.6e-230	77.8
WP_115370894.1\|1176421_1176631_+	hypothetical protein	NA	NA	NA	NA
WP_156733554.1\|1176640_1178305_+\|tail	phage tail protein	A0A193GYI4	Enterobacter_phage	2.4e-198	65.4
WP_004243354.1\|1178301_1178616_+	hypothetical protein	Q2A090	Sodalis_phage	1.2e-13	45.5
WP_115370896.1\|1178633_1179311_+	peptidase	T1SAP9	Salmonella_phage	6.8e-43	64.3
WP_004243350.1\|1179326_1180307_+	hypothetical protein	G9L6C5	Escherichia_phage	6.5e-111	59.4
WP_060555916.1\|1180365_1180797_+	hypothetical protein	A0A193GYT9	Enterobacter_phage	1.4e-30	54.8
WP_115370897.1\|1180805_1181147_+	hypothetical protein	NA	NA	NA	NA
WP_004243343.1\|1181210_1181522_+	hypothetical protein	Q858G5	Salmonella_phage	1.8e-14	38.5
WP_004243342.1\|1181521_1182127_+	hypothetical protein	A0A0F6TJN5	Escherichia_coli_O157_typing_phage	5.1e-66	60.7
WP_156733552.1\|1182126_1184589_+	hypothetical protein	A0A0F6TJD3	Escherichia_coli_O157_typing_phage	0.0e+00	70.0
WP_156733550.1\|1184572_1185061_+	hypothetical protein	A0A0F6R7N6	Escherichia_coli_O157_typing_phage	2.1e-49	59.9
WP_004243338.1\|1185060_1185609_+	hypothetical protein	A0A0F6TJ56	Escherichia_coli_O157_typing_phage	3.4e-45	60.2
WP_156733548.1\|1185611_1188695_+	hypothetical protein	T1SBJ1	Salmonella_phage	1.6e-163	50.8

DBSCAN-SWA_4

1192831 : 1201495

Escherichia_phage(33.33%)

holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_156733541.1\|1192831_1195333_+	hypothetical protein	G9L6E4	Escherichia_phage	5.8e-71	57.4
WP_156733539.1\|1195406_1196888_-	sulfatase-like hydrolase/transferase	NA	NA	NA	NA
WP_020945795.1\|1197179_1197551_+	hypothetical protein	G9L6E6	Escherichia_phage	3.9e-16	39.1
WP_004243326.1\|1197547_1197820_+\|holin	phage holin family protein	T1SA10	Salmonella_phage	1.9e-12	38.9
WP_115349912.1\|1197822_1198167_+	M15 family peptidase	F1BUL3	Cronobacter_phage	2.0e-43	84.3
WP_156733537.1\|1198166_1198661_+	hypothetical protein	NA	NA	NA	NA
WP_156733535.1\|1198939_1199533_-	hypothetical protein	NA	NA	NA	NA
WP_156733533.1\|1199679_1200459_+	nucleotidyltransferase domain-containing protein	A0A2D1GQQ2	Pseudomonas_phage	1.4e-31	39.2
WP_156733531.1\|1200442_1201495_+	nucleotidyltransferase	I1TRN7	Cronobacter_phage	1.2e-30	28.9

DBSCAN-SWA_5

1768196 : 1781760

Tupanvirus(55.56%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_156733370.1\|1768196_1770179_-	bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA	A0A2K9KZK0	Tupanvirus	1.1e-21	27.2
WP_075673352.1\|1770178_1771159_-	undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase	A8CG95	Salmonella_phage	1.1e-38	34.7
WP_099659662.1\|1771159_1772305_-	UDP-4-amino-4-deoxy-L-arabinose aminotransferase	A0A2K9L470	Tupanvirus	3.5e-39	28.8
WP_075673354.1\|1772438_1773188_-	ATP-binding cassette domain-containing protein	A0A2K9L090	Tupanvirus	7.1e-09	28.1
WP_099659661.1\|1773189_1774200_-	vitamin B12 ABC transporter permease BtuC	NA	NA	NA	NA
WP_023582381.1\|1774579_1774876_-	integration host factor subunit alpha	A0A0H3UZA0	Geobacillus_virus	4.2e-13	38.9
WP_075673356.1\|1774880_1777268_-\|tRNA	phenylalanine--tRNA ligase subunit beta	A0A1L3IZU3	BeAn_58058_virus	3.5e-09	27.4
WP_023582383.1\|1777282_1778266_-\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2K9L3A8	Tupanvirus	4.9e-34	37.7
WP_120655563.1\|1778441_1778489_-	pheST operon leader peptide PheM	NA	NA	NA	NA
WP_006537111.1\|1778597_1778954_-	50S ribosomal protein L20	NA	NA	NA	NA
WP_004263702.1\|1778996_1779194_-	50S ribosomal protein L35	NA	NA	NA	NA
WP_036937410.1\|1779288_1779828_-	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	3.7e-15	34.4
WP_075673357.1\|1779831_1781760_-\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	3.9e-128	37.2

DBSCAN-SWA_6

1848869 : 1862769

Enterobacterial_phage(16.67%)

tail,terminase,head,capsid,protease,portal

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_156733354.1\|1848869_1849268_-	hypothetical protein	A0A059VK01	Pseudomonas_phage	2.7e-31	47.0
WP_156733353.1\|1849324_1849906_-	hypothetical protein	Q7Y3Z7	Yersinia_phage	1.8e-52	50.0
WP_156733352.1\|1849905_1850502_-	hypothetical protein	S4TSP7	Salmonella_phage	3.2e-52	53.3
WP_156733351.1\|1850502_1853778_-\|tail	phage tail tape measure protein	B7SE05	Pseudomonas_virus	8.4e-54	46.7
WP_004242485.1\|1853904_1854096_+	YqaE/Pmp3 family membrane protein	NA	NA	NA	NA
WP_041701216.1\|1854124_1854403_-	DUF4035 domain-containing protein	NA	NA	NA	NA
WP_088495854.1\|1854399_1854816_-	hypothetical protein	NA	NA	NA	NA
WP_017628356.1\|1854880_1855546_-	hypothetical protein	NA	NA	NA	NA
WP_087802809.1\|1855555_1855897_-	DUF3168 domain-containing protein	NA	NA	NA	NA
WP_087802806.1\|1855902_1856376_-	hypothetical protein	A0A0R6PHU8	Moraxella_phage	1.3e-11	30.5
WP_087802803.1\|1856365_1856695_-\|head	phage head closure protein	NA	NA	NA	NA
WP_004242478.1\|1856694_1856994_-	hypothetical protein	K7PKV5	Enterobacterial_phage	2.8e-33	63.3
WP_156733350.1\|1857032_1858199_-\|capsid	phage major capsid protein	F1C582	Cronobacter_phage	9.6e-170	79.8
WP_004242476.1\|1858202_1858871_-\|head,protease	HK97 family phage prohead protease	K7PM91	Enterobacterial_phage	6.6e-83	65.8
WP_004242475.1\|1858888_1860157_-\|portal	phage portal protein	Q77W97	Enterobacteria_phage	1.8e-201	80.4
WP_156733349.1\|1860156_1861890_-\|terminase	phage terminase small subunit P27 family	A0A0U2C138	Paracoccus_phage	5.8e-147	46.2
WP_006537822.1\|1861843_1862311_-\|terminase	phage terminase small subunit P27 family	Q9B019	Phage_GMSE-1	9.5e-44	59.7
WP_156733348.1\|1862430_1862769_-	HNH endonuclease	F1C587	Cronobacter_phage	7.1e-41	68.8

DBSCAN-SWA_7

1873506 : 1883035

Morganella_phage(50.0%)

integrase

attL 1871478:1871490|attR 1884613:1884625

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1871478:1871490	attL	NA	NA	NA	NA
WP_004244726.1\|1873506_1873719_-	RNA chaperone/antiterminator CspA	A0A1W6JNX5	Morganella_phage	3.1e-26	81.4
WP_049219743.1\|1874057_1874456_-	antitermination protein	Q8W638	Enterobacteria_phage	1.6e-31	54.3
WP_156733336.1\|1874483_1875509_-	DUF968 domain-containing protein	A0A1W6JP62	Morganella_phage	8.3e-85	46.8
WP_156733335.1\|1875505_1876312_-	KilA-N domain-containing protein	A0A1W6JP13	Morganella_phage	6.8e-90	62.5
WP_156734436.1\|1876333_1876849_-	hypothetical protein	U5P0A0	Shigella_phage	5.9e-23	44.2
WP_017628377.1\|1877406_1877586_-	DUF4222 domain-containing protein	A0A1W6JP38	Morganella_phage	3.4e-10	55.2
WP_098943242.1\|1877847_1878324_-	hypothetical protein	A0A1W6JP72	Morganella_phage	7.9e-46	61.1
WP_049217157.1\|1878361_1878556_-	hypothetical protein	H9C161	Pectobacterium_phage	6.5e-15	61.0
WP_156733334.1\|1878659_1879307_+	helix-turn-helix domain-containing protein	K7PM82	Enterobacteria_phage	8.4e-75	64.6
WP_156733333.1\|1879702_1880227_+	HD family hydrolase	A0A1W6JP41	Morganella_phage	1.1e-53	61.0
WP_017628380.1\|1880312_1880564_+	excisionase	NA	NA	NA	NA
WP_156733332.1\|1880538_1881672_+\|integrase	tyrosine-type recombinase/integrase	Q77Z04	Phage_21	1.4e-154	72.0
WP_109850542.1\|1881781_1883035_-	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	1.8e-20	90.7
1884613:1884625	attR	NA	NA	NA	NA

DBSCAN-SWA_8

1928135 : 1969632

Proteus_phage(26.83%)

tail,terminase,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_156733322.1\|1928135_1928366_+	DNA polymerase III subunit theta	A0A1P8DTI0	Proteus_phage	7.4e-34	97.4
WP_156733321.1\|1928405_1929818_-	hypothetical protein	A0A1P8DTJ0	Proteus_phage	8.7e-141	62.5
WP_156733320.1\|1929822_1933494_-	DUF1983 domain-containing protein	A0A1P8DTI4	Proteus_phage	0.0e+00	62.2
WP_156733319.1\|1933545_1934133_-\|tail	tail assembly protein	F1C572	Cronobacter_phage	3.2e-57	59.4
WP_156733318.1\|1934129_1934840_-	peptidase P60	F1C573	Cronobacter_phage	9.9e-85	64.8
WP_109391241.1\|1934836_1935580_-\|tail	phage minor tail protein L	K7PJS0	Enterobacterial_phage	1.3e-87	59.0
WP_115370826.1\|1935576_1935918_-\|tail	phage tail protein	I6PBN7	Cronobacter_phage	2.6e-27	49.1
WP_156733317.1\|1936060_1936303_+	hypothetical protein	NA	NA	NA	NA
WP_156733316.1\|1936306_1936522_-	hypothetical protein	NA	NA	NA	NA
WP_156733315.1\|1936533_1939467_-\|tail	phage tail tape measure protein	A0A0K0VLY2	Klebsiella_phage	5.5e-97	29.8
WP_156733314.1\|1939527_1940397_-	hypothetical protein	NA	NA	NA	NA
WP_109391246.1\|1940541_1940859_-	hypothetical protein	NA	NA	NA	NA
WP_164530193.1\|1940880_1941360_-	hypothetical protein	NA	NA	NA	NA
WP_156733312.1\|1941572_1942298_-	hypothetical protein	A0A0P0ZD96	Stx2-converting_phage	1.0e-65	56.8
WP_156733311.1\|1943018_1943189_-	hypothetical protein	NA	NA	NA	NA
WP_156733310.1\|1943279_1943996_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_156734434.1\|1944125_1945667_-	DNA repair protein	NA	NA	NA	NA
WP_109372780.1\|1945997_1946177_+	hypothetical protein	A0A192Y6A8	Salmonella_phage	1.7e-22	81.4
WP_156733309.1\|1946182_1946554_-	hypothetical protein	E7C9U7	Salmonella_phage	1.9e-34	62.7
WP_156733308.1\|1946645_1946936_-	hypothetical protein	F8UBV2	Escherichia_phage	7.7e-12	47.0
WP_156733307.1\|1946950_1947256_-	hypothetical protein	I6PDG2	Cronobacter_phage	1.7e-22	56.4
WP_156733306.1\|1947307_1947964_-\|tail	phage tail protein	G8C7Q3	Escherichia_phage	6.6e-59	57.2
WP_156733305.1\|1948009_1948411_-	hypothetical protein	NA	NA	NA	NA
WP_156733304.1\|1948407_1948860_-	hypothetical protein	I6PCW1	Cronobacter_phage	9.2e-36	52.7
WP_156733303.1\|1948861_1949215_-	hypothetical protein	I6PD77	Cronobacter_phage	4.5e-22	44.7
WP_156733302.1\|1949217_1949697_-	hypothetical protein	G8C7P9	Escherichia_phage	2.2e-32	47.7
WP_156733301.1\|1949736_1950021_-	hypothetical protein	NA	NA	NA	NA
WP_156733300.1\|1950023_1950977_-	hypothetical protein	A0A1B0VMF8	Pseudomonas_phage	1.4e-126	71.9
WP_156733299.1\|1950990_1951764_-	hypothetical protein	A0A1B0VMG1	Pseudomonas_phage	1.7e-66	59.7
WP_156733298.1\|1951866_1952106_-	hypothetical protein	NA	NA	NA	NA
WP_156733297.1\|1952174_1953296_-	hypothetical protein	I6PD76	Cronobacter_phage	3.3e-103	51.0
WP_156733296.1\|1953292_1954663_-	DUF4055 domain-containing protein	A0A1B0VMH0	Pseudomonas_phage	1.8e-122	49.7
WP_156733295.1\|1954662_1956150_-\|terminase	terminase	A0A1W6JNY3	Morganella_phage	4.5e-265	88.6
WP_156733294.1\|1956152_1956761_-	hypothetical protein	A0A077KBY7	Edwardsiella_phage	3.6e-75	78.5
WP_109829196.1\|1956848_1957067_-	hypothetical protein	NA	NA	NA	NA
WP_156733293.1\|1957139_1957316_-	hypothetical protein	A0A1W6JNV6	Morganella_phage	8.8e-19	74.5
WP_156733292.1\|1957308_1957467_-	hypothetical protein	NA	NA	NA	NA
WP_164530194.1\|1957497_1957656_-	hypothetical protein	NA	NA	NA	NA
WP_156733291.1\|1957652_1958195_-	KilA-N domain-containing protein	A0A2H4FQV0	Salmonella_phage	8.4e-52	59.1
WP_156733290.1\|1958673_1959084_-	hypothetical protein	NA	NA	NA	NA
WP_156733289.1\|1959080_1959338_-	peptidase	Q8SBD8	Shigella_phage	2.6e-11	45.2
WP_156733288.1\|1959225_1959603_-	hypothetical protein	A0A1W6JP00	Morganella_phage	6.3e-06	31.7
WP_156733287.1\|1959599_1959992_-	M15 family peptidase	A0A1P8DTE2	Proteus_phage	1.9e-50	97.9
WP_036906009.1\|1959988_1960285_-\|holin	holin	E7C9S8	Salmonella_phage	1.0e-19	45.4
WP_104731779.1\|1960699_1961203_-	DUF1133 family protein	A0A1P8DTF1	Proteus_phage	2.2e-86	94.0
WP_071233632.1\|1961199_1961391_-	hypothetical protein	A0A1P8DTD3	Proteus_phage	1.3e-28	96.8
WP_156733286.1\|1961543_1962137_-	recombination protein NinG	A0A1P8DTE0	Proteus_phage	4.1e-84	87.7
WP_156733185.1\|1962229_1962679_-	hypothetical protein	A0A1P8DTF9	Proteus_phage	2.4e-76	97.3
WP_156733184.1\|1962800_1963025_-	DUF3310 domain-containing protein	A0A0A6Z5B6	Enterobacter_phage	6.1e-25	75.4
WP_156733183.1\|1963188_1963638_-	hypothetical protein	A0A2I7R8L6	Vibrio_phage	6.4e-13	36.0
WP_156733182.1\|1963648_1963825_-	hypothetical protein	NA	NA	NA	NA
WP_156733181.1\|1963826_1964060_-	DUF551 domain-containing protein	NA	NA	NA	NA
WP_152964332.1\|1964532_1964700_-	hypothetical protein	NA	NA	NA	NA
WP_156733180.1\|1964719_1965574_-	ATP-binding protein	K7PLU3	Enterobacteria_phage	2.8e-86	59.6
WP_156733179.1\|1965577_1966393_-	hypothetical protein	G8C7U5	Escherichia_phage	2.4e-79	57.9
WP_156733178.1\|1966392_1967061_-	hypothetical protein	NA	NA	NA	NA
WP_109391284.1\|1967197_1967539_-	transcriptional regulator	A0A1P8DTF0	Proteus_phage	2.7e-48	91.9
WP_049257589.1\|1967682_1967892_-	helix-turn-helix transcriptional regulator	A0A1P8DTF8	Proteus_phage	1.8e-31	94.2
WP_156734432.1\|1967974_1968658_+	helix-turn-helix domain-containing protein	A0A1P8DTH0	Proteus_phage	2.0e-127	95.2
WP_156733285.1\|1968807_1969632_+	NYN domain-containing protein	A4JWQ6	Burkholderia_virus	2.1e-38	41.0

DBSCAN-SWA_9

1973092 : 1979315

Escherichia_phage(44.44%)

integrase

attL 1969826:1969839|attR 1982929:1982942

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1969826:1969839	attL	NA	NA	NA	NA
WP_156733279.1\|1973092_1973344_+	hypothetical protein	A0A1P8DTG3	Proteus_phage	7.8e-37	91.6
WP_156733278.1\|1973340_1974225_+	recombinase RecT	A0A2L1IV84	Escherichia_phage	2.2e-94	61.9
WP_156733277.1\|1974221_1974920_+	exonuclease	A0A2R2Z325	Escherichia_phage	2.0e-74	57.3
WP_156733276.1\|1974909_1975323_+	single-stranded DNA-binding protein	A0A1W6JNW8	Morganella_phage	9.2e-51	73.7
WP_164530196.1\|1975388_1975550_+	hypothetical protein	A0A2R2X2A8	Escherichia_phage	6.4e-08	49.0
WP_156733275.1\|1975585_1975789_+	hypothetical protein	NA	NA	NA	NA
WP_156733274.1\|1975781_1976006_+	hypothetical protein	A0A1U9ZAB3	Proteus_phage	1.4e-16	61.6
WP_036935799.1\|1975995_1976256_+	hypothetical protein	NA	NA	NA	NA
WP_156733273.1\|1976416_1976602_+	hypothetical protein	NA	NA	NA	NA
WP_156733272.1\|1976594_1976963_+	hypothetical protein	NA	NA	NA	NA
WP_156733271.1\|1976949_1977552_+	DNA methyltransferase	G8C7S6	Escherichia_phage	1.2e-59	57.1
WP_103004601.1\|1977559_1977766_+	DUF4060 family protein	NA	NA	NA	NA
WP_099659572.1\|1977970_1978159_+	AlpA family phage regulatory protein	A0A0P0ZBL0	Stx2-converting_phage	5.9e-13	56.9
WP_156733270.1\|1978139_1979315_-\|integrase	tyrosine-type recombinase/integrase	A0A0P0ZCE7	Stx2-converting_phage	1.5e-133	58.3
1982929:1982942	attR	NA	NA	NA	NA

DBSCAN-SWA_10

2053353 : 2087570

Morganella_phage(29.73%)

integrase,tail,terminase,head,holin,capsid,lysis,protease,portal

attL 2045268:2045284|attR 2092806:2092822

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2045268:2045284	attL	NA	NA	NA	NA
WP_156733251.1\|2053353_2053752_-	hypothetical protein	A0A059VK01	Pseudomonas_phage	1.1e-32	49.2
WP_156733250.1\|2053772_2054600_-	hypothetical protein	A0A0P0IYG9	Acinetobacter_phage	4.0e-05	37.1
WP_156733249.1\|2054658_2055240_-	hypothetical protein	Q7Y3Z7	Yersinia_phage	2.0e-51	49.5
WP_156733248.1\|2055239_2055836_-	hypothetical protein	S4TSP7	Salmonella_phage	7.8e-51	50.3
WP_156733247.1\|2055836_2059121_-\|tail	phage tail tape measure protein	A0A220VZA0	Acinetobacter_phage	8.4e-38	31.1
WP_072063870.1\|2059163_2059442_-	DUF4035 domain-containing protein	NA	NA	NA	NA
WP_069368417.1\|2059438_2059852_-	hypothetical protein	NA	NA	NA	NA
WP_072063869.1\|2059886_2060561_-	hypothetical protein	NA	NA	NA	NA
WP_069368415.1\|2060570_2060912_-	DUF3168 domain-containing protein	NA	NA	NA	NA
WP_069368414.1\|2060916_2061390_-	hypothetical protein	A0A0R6PHU8	Moraxella_phage	5.7e-12	31.7
WP_069368413.1\|2061379_2061709_-\|head	phage head closure protein	A0A2H4JHA9	uncultured_Caudovirales_phage	1.6e-05	33.9
WP_069368412.1\|2061717_2062044_-\|head,tail	phage gp6-like head-tail connector protein	A0A1P8DTJ4	Proteus_phage	2.7e-53	95.4
WP_156733246.1\|2062329_2063544_-\|capsid	phage major capsid protein	A0A1P8DTJ7	Proteus_phage	1.6e-220	99.3
WP_156733245.1\|2063555_2064407_-\|protease	Clp protease ClpP	A0A1P8DTI2	Proteus_phage	2.1e-150	98.6
WP_109402514.1\|2064411_2065737_-\|portal	phage portal protein	A0A1P8DTI5	Proteus_phage	1.0e-207	80.6
WP_156733244.1\|2065737_2067480_-\|terminase	phage terminase small subunit P27 family	A0A0U2C138	Paracoccus_phage	1.8e-143	45.3
WP_064720837.1\|2067433_2067901_-\|terminase	phage terminase small subunit P27 family	Q9B019	Phage_GMSE-1	2.5e-44	60.4
WP_156733243.1\|2068270_2068678_-	hypothetical protein	NA	NA	NA	NA
WP_156733242.1\|2068725_2069064_-	HNH endonuclease	F1C587	Cronobacter_phage	3.7e-42	67.9
WP_156733241.1\|2069067_2069478_-	hypothetical protein	A0A1P8DTD7	Proteus_phage	9.8e-45	70.6
WP_156733240.1\|2069467_2069779_-	hypothetical protein	NA	NA	NA	NA
WP_156734430.1\|2070594_2071083_-\|lysis	lysis protein	A0A1P8DTG0	Proteus_phage	6.8e-53	90.2
WP_036976899.1\|2071084_2071417_-	M15 family peptidase	F1BUL3	Cronobacter_phage	4.4e-35	70.3
WP_004918415.1\|2071403_2071697_-\|holin	phage holin family protein	NA	NA	NA	NA
WP_004916901.1\|2071693_2072083_-	membrane protein	S4TRS4	Salmonella_phage	4.2e-13	35.0
WP_058336245.1\|2072212_2072455_+	hypothetical protein	NA	NA	NA	NA
WP_099660111.1\|2072458_2072674_-	hypothetical protein	NA	NA	NA	NA
WP_156733239.1\|2072993_2073242_-	hypothetical protein	NA	NA	NA	NA
WP_041705231.1\|2073313_2073526_-	hypothetical protein	NA	NA	NA	NA
WP_156733238.1\|2073851_2074532_-	hypothetical protein	A0A1W6JP37	Morganella_phage	5.2e-51	49.1
WP_156733237.1\|2074559_2075585_-	DUF968 domain-containing protein	A0A1W6JP62	Morganella_phage	7.5e-86	45.9
WP_156733236.1\|2075581_2076388_-	KilA-N domain-containing protein	A0A1W6JP13	Morganella_phage	8.8e-90	62.1
WP_036904907.1\|2076406_2076790_-	RusA family crossover junction endodeoxyribonuclease	A0A1C9IIA0	Salmonella_phage	1.7e-27	53.7
WP_023582529.1\|2076852_2077023_-	hypothetical protein	NA	NA	NA	NA
WP_036904905.1\|2077022_2077415_-	hypothetical protein	NA	NA	NA	NA
WP_156733235.1\|2077411_2078050_-	phage N-6-adenine-methyltransferase	K7PGU4	Enterobacteria_phage	9.8e-84	66.7
WP_156733234.1\|2078046_2079168_-	replication protein 15	K7PLZ7	Enterobacterial_phage	6.8e-48	57.2
WP_099660103.1\|2079177_2079357_-	DUF4222 domain-containing protein	A0A1W6JP38	Morganella_phage	6.2e-12	58.6
WP_156733233.1\|2079643_2080102_-	hypothetical protein	A0A1W6JP72	Morganella_phage	3.5e-27	45.4
WP_036900996.1\|2080153_2080387_-	hypothetical protein	A0A1B5FPK9	Escherichia_phage	2.2e-09	40.9
WP_156733232.1\|2080462_2081182_+	transcriptional regulator	E7C9R0	Salmonella_phage	5.0e-28	33.8
WP_156733231.1\|2081306_2081510_+	hypothetical protein	NA	NA	NA	NA
WP_156733230.1\|2081735_2082632_+	recombination-associated protein RdgC	A0A1W6JP69	Morganella_phage	2.6e-98	59.7
WP_156733229.1\|2082713_2083247_+	HD family hydrolase	A0A1W6JP41	Morganella_phage	1.4e-54	59.6
WP_156733228.1\|2083239_2083737_+	single-stranded DNA-binding protein	A0A220NRQ8	Escherichia_phage	5.0e-43	66.1
WP_156733227.1\|2083745_2084201_+	hypothetical protein	A0A248SL53	Klebsiella_phage	1.3e-26	40.5
WP_156733226.1\|2084202_2084841_+	hypothetical protein	H2BDG4	Pseudomonas_virus	3.3e-39	41.9
WP_156733225.1\|2084850_2085351_+	hypothetical protein	NA	NA	NA	NA
WP_156733224.1\|2085334_2085808_+	SAM-dependent methyltransferase	A0A1W6JP48	Morganella_phage	9.2e-71	78.1
WP_072065179.1\|2085857_2086103_+	pyocin activator protein PrtN	A0A1W6JP35	Morganella_phage	6.7e-25	70.7
WP_072065180.1\|2086146_2086434_-	DinI-like family protein	A0A1W6JP10	Morganella_phage	8.7e-08	31.8
WP_109402803.1\|2086487_2087570_-\|integrase	site-specific integrase	A0A1W6JP34	Morganella_phage	2.3e-170	79.7
2092806:2092822	attR	NA	NA	NA	NA

DBSCAN-SWA_11

2116595 : 2168880

Acinetobacter_phage(18.75%)

integrase,tail,terminase,head,holin,plate,lysis

attL 2116338:2116353|attR 2164212:2164227

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2116338:2116353	attL	NA	NA	NA	NA
WP_156733216.1\|2116595_2116826_+	DNA polymerase III subunit theta	A0A1P8DTI0	Proteus_phage	6.3e-33	92.1
WP_156733215.1\|2116826_2117447_-\|tail	tail fiber assembly protein	NA	NA	NA	NA
WP_156734428.1\|2117446_2118307_-	hypothetical protein	M1TAS6	Escherichia_phage	7.4e-26	44.2
WP_156733214.1\|2118968_2119601_-	DUF2612 domain-containing protein	K4HYS2	Acinetobacter_phage	5.6e-47	49.0
WP_156733213.1\|2119600_2120791_-	hypothetical protein	E2GM17	Acinetobacter_phage	6.3e-76	40.4
WP_049206563.1\|2120787_2121141_-	hypothetical protein	I2GUF7	Acinetobacter_phage	9.4e-28	52.1
WP_156733212.1\|2121142_2121835_-\|plate	phage baseplate protein	A0A2R3UAK1	Myoviridae_environmental_samples	4.4e-29	40.2
WP_156733211.1\|2121815_2122706_-	hypothetical protein	A0A220NQG9	Acinetobacter_phage	4.7e-60	42.4
WP_156733210.1\|2122692_2122968_-	hypothetical protein	A0A1X9SFF3	Acinetobacter_phage	2.9e-16	46.7
WP_156733209.1\|2122968_2123676_-	hypothetical protein	A0A1V0DZ59	Acinetobacter_phage	4.8e-47	54.4
WP_156733208.1\|2123733_2124243_-	hypothetical protein	NA	NA	NA	NA
WP_049201304.1\|2124359_2124761_-	HEPN domain-containing protein	NA	NA	NA	NA
WP_156733207.1\|2124751_2125534_-	hypothetical protein	NA	NA	NA	NA
WP_156733206.1\|2125804_2126800_-	DUF4431 domain-containing protein	NA	NA	NA	NA
WP_156733205.1\|2126865_2129256_-	hypothetical protein	A0A1W6JPF2	Morganella_phage	5.5e-180	47.6
WP_156733204.1\|2129509_2129920_-	hypothetical protein	A0A068CGG2	Acinetobacter_phage	4.1e-19	40.7
WP_129037599.1\|2129919_2130366_-	hypothetical protein	A0A1V0DZ74	Acinetobacter_phage	9.7e-38	51.0
WP_156733203.1\|2130378_2131836_-	DUF3383 family protein	H9C0W5	Aeromonas_phage	1.7e-67	33.9
WP_156733202.1\|2131847_2132333_-	hypothetical protein	NA	NA	NA	NA
WP_156734426.1\|2132320_2132698_-	hypothetical protein	K4I3A0	Acinetobacter_phage	5.7e-23	41.8
WP_156733201.1\|2132687_2133146_-	hypothetical protein	A0A077KC03	Edwardsiella_phage	9.0e-31	53.0
WP_156733200.1\|2133138_2133543_-	DUF4054 domain-containing protein	NA	NA	NA	NA
WP_156734424.1\|2133545_2133749_-	hypothetical protein	NA	NA	NA	NA
WP_156733199.1\|2133873_2134899_-	hypothetical protein	A0A077KC85	Edwardsiella_phage	6.9e-63	37.5
WP_156733198.1\|2134898_2135387_-	hypothetical protein	A0A077KAW3	Edwardsiella_phage	2.4e-34	47.2
WP_129037614.1\|2135389_2136550_-	DUF2213 domain-containing protein	A0A219YBB9	Aeromonas_phage	7.5e-58	36.2
WP_156734423.1\|2136599_2137313_-\|head	phage head morphogenesis protein	A0A2R3UAK2	Myoviridae_environmental_samples	7.4e-40	41.3
WP_156733197.1\|2137371_2138790_-	DUF1073 domain-containing protein	A0A077KC81	Edwardsiella_phage	3.0e-77	37.8
WP_156733196.1\|2138786_2140307_-\|terminase	phage terminase large subunit	Q7Y5U7	Haemophilus_phage	1.1e-130	49.9
WP_072063061.1\|2140902_2141592_-	hypothetical protein	Q5G8R0	Enterobacteria_phage	1.5e-90	71.6
WP_156733195.1\|2141704_2141872_+	hypothetical protein	NA	NA	NA	NA
WP_156733194.1\|2142106_2142268_-	hypothetical protein	NA	NA	NA	NA
WP_156733193.1\|2142264_2142714_-\|lysis	lysis protein	M1FJ79	Enterobacteria_phage	2.5e-09	30.9
WP_156733192.1\|2142710_2143115_-	structural protein	A0A0E3JJ20	Enterobacteria_phage	5.9e-26	46.3
WP_036906009.1\|2143111_2143408_-\|holin	holin	E7C9S8	Salmonella_phage	1.0e-19	45.4
WP_156733191.1\|2143591_2143879_-	hypothetical protein	NA	NA	NA	NA
WP_156733190.1\|2144096_2144576_+	hypothetical protein	NA	NA	NA	NA
WP_063108508.1\|2145076_2145904_-	antitermination protein	H6WRZ1	Salmonella_phage	2.9e-56	43.4
WP_156733189.1\|2145900_2146092_-	hypothetical protein	A0A1P8DTD3	Proteus_phage	2.6e-24	84.1
WP_156733188.1\|2146244_2146610_-	RusA family crossover junction endodeoxyribonuclease	E5AGG1	Erwinia_phage	6.7e-37	62.4
WP_156733187.1\|2146606_2146897_-	DUF1364 family protein	K7P6U2	Enterobacteria_phage	2.2e-38	77.9
WP_164530201.1\|2147039_2147165_-	hypothetical protein	A0A1P8DTE6	Proteus_phage	3.0e-13	89.5
WP_156733185.1\|2147151_2147601_-	hypothetical protein	A0A1P8DTF9	Proteus_phage	2.4e-76	97.3
WP_156733184.1\|2147722_2147947_-	DUF3310 domain-containing protein	A0A0A6Z5B6	Enterobacter_phage	6.1e-25	75.4
WP_156733183.1\|2148110_2148560_-	hypothetical protein	A0A2I7R8L6	Vibrio_phage	6.4e-13	36.0
WP_156733182.1\|2148570_2148747_-	hypothetical protein	NA	NA	NA	NA
WP_156733181.1\|2148748_2148982_-	DUF551 domain-containing protein	NA	NA	NA	NA
WP_152964332.1\|2149454_2149622_-	hypothetical protein	NA	NA	NA	NA
WP_156733180.1\|2149641_2150496_-	ATP-binding protein	K7PLU3	Enterobacteria_phage	2.8e-86	59.6
WP_156733179.1\|2150499_2151315_-	hypothetical protein	G8C7U5	Escherichia_phage	2.4e-79	57.9
WP_156733178.1\|2151314_2151983_-	hypothetical protein	NA	NA	NA	NA
WP_109391284.1\|2152119_2152461_-	transcriptional regulator	A0A1P8DTF0	Proteus_phage	2.7e-48	91.9
WP_156733177.1\|2152594_2152798_-	transcriptional regulator	K7P6H5	Enterobacteria_phage	1.5e-14	62.9
WP_156733176.1\|2152916_2153627_+	helix-turn-helix domain-containing protein	M9NZE3	Enterobacteria_phage	1.5e-77	62.9
WP_156733175.1\|2154101_2154374_+	hypothetical protein	NA	NA	NA	NA
WP_156733174.1\|2154394_2154898_-	hypothetical protein	NA	NA	NA	NA
WP_156733173.1\|2155098_2155338_+	hypothetical protein	NA	NA	NA	NA
WP_156733172.1\|2155367_2155556_+	hypothetical protein	NA	NA	NA	NA
WP_156733171.1\|2155557_2155701_+	hypothetical protein	NA	NA	NA	NA
WP_156733170.1\|2155775_2156684_+	cell envelope biogenesis protein TolA	A0A2I7QK72	Vibrio_phage	2.0e-21	47.9
WP_164530202.1\|2156739_2156895_+	hypothetical protein	NA	NA	NA	NA
WP_156733169.1\|2156902_2157166_+	hypothetical protein	NA	NA	NA	NA
WP_156733168.1\|2157162_2157384_+	hypothetical protein	NA	NA	NA	NA
WP_156733167.1\|2157377_2158307_+	recombinase RecT	F1C5B8	Cronobacter_phage	1.2e-109	65.8
WP_156733166.1\|2158303_2159002_+	exonuclease	A0A2R2Z325	Escherichia_phage	7.0e-75	57.8
WP_156733165.1\|2158991_2159489_+	single-stranded DNA-binding protein	A0A0A0P1Q9	Enterobacteria_phage	1.4e-53	80.0
WP_156733164.1\|2159548_2159842_+	hypothetical protein	NA	NA	NA	NA
WP_156733163.1\|2159865_2160045_+	hypothetical protein	NA	NA	NA	NA
WP_156733162.1\|2160044_2160578_+	hypothetical protein	NA	NA	NA	NA
WP_156733161.1\|2160577_2160730_+	hypothetical protein	A0A1P8DTI8	Proteus_phage	5.1e-15	97.3
WP_156733160.1\|2160837_2161083_+	hypothetical protein	NA	NA	NA	NA
WP_156733159.1\|2161453_2161789_+	DUF2591 family protein	A0A1P8DTH6	Proteus_phage	1.5e-14	48.1
WP_156733158.1\|2161778_2162324_+	phage N-6-adenine-methyltransferase	G9L688	Escherichia_phage	8.7e-57	60.5
WP_063693452.1\|2162736_2162943_+	AlpA family transcriptional regulator	A0A1V0E8E5	Vibrio_phage	8.7e-10	51.8
WP_156734421.1\|2162946_2164131_-\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	3.4e-114	51.6
WP_023581360.1\|2164566_2164896_+	sulfurtransferase TusE	NA	NA	NA	NA
2164212:2164227	attR	NA	NA	NA	NA
WP_075673147.1\|2164939_2165221_-	acylphosphatase	NA	NA	NA	NA
WP_036912304.1\|2165421_2165739_+	heat shock protein HspQ	NA	NA	NA	NA
WP_075673146.1\|2165817_2166231_-	CoA-binding protein	NA	NA	NA	NA
WP_075673145.1\|2166368_2166827_+	methylglyoxal synthase	NA	NA	NA	NA
WP_075673144.1\|2166828_2168880_-	DNA helicase IV	A7KV33	Bacillus_phage	3.0e-17	24.9

DBSCAN-SWA_12

2473242 : 2484083

Mycobacterium_phage(22.22%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_075671562.1\|2473242_2474454_+	D-alanyl-D-alanine carboxypeptidase DacA	B6DZZ7	Stx2-converting_phage	2.3e-102	48.1
WP_036912266.1\|2474654_2474918_+	YbeD family protein	NA	NA	NA	NA
WP_075671560.1\|2475078_2475723_+	lipoyl(octanoyl) transferase LipB	NA	NA	NA	NA
WP_075671558.1\|2475824_2476790_+	lipoyl synthase	NA	NA	NA	NA
WP_023581134.1\|2476803_2477178_+	fluoride efflux transporter CrcB	A0A2H4J148	uncultured_Caudovirales_phage	2.5e-23	48.0
WP_023581133.1\|2477315_2477525_-	transcription antiterminator/RNA stability regulator CspE	A0A1W6JNX5	Morganella_phage	4.5e-22	74.2
WP_156733096.1\|2477722_2478196_-	methylated-DNA--[protein]-cysteine S-methyltransferase	A0A167R6J9	Powai_lake_megavirus	2.2e-16	34.2
WP_075671554.1\|2478479_2478704_+	glutaredoxin family protein	V5UN81	Mycobacterium_phage	7.8e-12	45.7
WP_075671552.1\|2478715_2479135_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	R4JF54	Bacillus_phage	8.0e-10	37.6
WP_156733095.1\|2479140_2481267_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	V9VI16	Lactococcus_phage	2.0e-202	50.4
WP_156733094.1\|2481291_2482260_+	class 1b ribonucleoside-diphosphate reductase subunit beta	R4TBI6	Mycobacterium_phage	2.2e-135	72.4
WP_075671546.1\|2482883_2484083_+	glycine betaine/L-proline ABC transporter ATP-binding protein ProV	G3M9Y6	Bacillus_virus	2.4e-27	36.6

DBSCAN-SWA_13

3500858 : 3574878

Bacillus_phage(33.33%)

tRNA,transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_156734395.1\|3500858_3502223_+\|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE	NA	NA	NA	NA
WP_156734490.1\|3502371_3502629_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_075673274.1\|3503036_3503498_+	DUF1097 domain-containing protein	NA	NA	NA	NA
WP_156734393.1\|3503667_3504462_-	TonB family protein	NA	NA	NA	NA
WP_156734391.1\|3504489_3507534_-	TonB-dependent receptor	NA	NA	NA	NA
WP_156734389.1\|3507575_3508937_-	DUF560 domain-containing protein	NA	NA	NA	NA
WP_156734388.1\|3509148_3509910_-	hypothetical protein	NA	NA	NA	NA
WP_156734386.1\|3510342_3511230_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_156734384.1\|3511403_3512372_-	acyltransferase	NA	NA	NA	NA
WP_099659545.1\|3512571_3513108_+	flagellar protein	NA	NA	NA	NA
WP_075673725.1\|3513365_3514229_+	glycosyltransferase	NA	NA	NA	NA
WP_156734382.1\|3514264_3515029_+	transferase	NA	NA	NA	NA
WP_099659546.1\|3515025_3515856_-	formate dehydrogenase accessory sulfurtransferase FdhD	NA	NA	NA	NA
WP_143484136.1\|3516033_3519081_+	formate dehydrogenase-N subunit alpha	NA	NA	NA	NA
WP_099659548.1\|3519092_3520031_+	formate dehydrogenase subunit beta	NA	NA	NA	NA
WP_075673730.1\|3520027_3520684_+	formate dehydrogenase cytochrome b556 subunit	NA	NA	NA	NA
WP_075673731.1\|3520890_3521811_+	formate dehydrogenase accessory protein FdhE	NA	NA	NA	NA
WP_156734380.1\|3521826_3523218_+\|tRNA	L-seryl-tRNA(Sec) selenium transferase	NA	NA	NA	NA
WP_156734379.1\|3523214_3525077_+	selenocysteine-specific translation elongation factor	A0A2K9KZ60	Tupanvirus	7.0e-13	23.6
WP_156734377.1\|3525186_3526836_+	sulfatase-like hydrolase/transferase	NA	NA	NA	NA
WP_156734375.1\|3526953_3527382_-	TOBE domain-containing protein	NA	NA	NA	NA
WP_156734374.1\|3527696_3528725_-	endoglucanase	NA	NA	NA	NA
WP_075673738.1\|3529940_3530852_-	sensor domain-containing diguanylate cyclase	A0A127AWB9	Bacillus_phage	1.3e-09	27.6
WP_075673739.1\|3530891_3531362_-	cellulose biosynthesis protein	NA	NA	NA	NA
WP_156734372.1\|3531377_3535079_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_156734369.1\|3535092_3537444_-	cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB	NA	NA	NA	NA
WP_075673742.1\|3537446_3539567_-	UDP-forming cellulose synthase catalytic subunit	NA	NA	NA	NA
WP_075673743.1\|3539738_3540137_-	hypothetical protein	NA	NA	NA	NA
WP_156734367.1\|3541500_3542052_+	DUF1768 domain-containing protein	A0A288TYC1	Enterococcus_phage	1.0e-36	51.9
WP_075674279.1\|3542208_3543120_+	N-acetylglucosamine kinase	NA	NA	NA	NA
WP_075674278.1\|3543218_3543803_+\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_075674281.1\|3543822_3544386_-	acetate uptake transporter	NA	NA	NA	NA
WP_083629138.1\|3544747_3545143_+	YgiW/YdeI family stress tolerance OB fold protein	A0A1I9LJU6	Stx_converting_phage	7.3e-21	43.5
WP_099659555.1\|3545640_3546090_+	metal-binding protein	NA	NA	NA	NA
WP_156734365.1\|3546207_3547743_-	MFS transporter	NA	NA	NA	NA
WP_075674273.1\|3548947_3549580_+	TetR family transcriptional regulator	NA	NA	NA	NA
WP_075674272.1\|3549636_3551043_-	YfcC family protein	NA	NA	NA	NA
WP_075674271.1\|3551052_3552186_-	M20 family metallopeptidase	NA	NA	NA	NA
WP_001353740.1\|3553489_3553729_+	DUF1819 family protein	NA	NA	NA	NA
WP_070342364.1\|3555279_3556125_+	lincosamide nucleotidyltransferase Lnu(F)	NA	NA	NA	NA
WP_000777554.1\|3556121_3556595_+	trimethoprim-resistant dihydrofolate reductase DfrA1	A0A140HLG8	Bacillus_phage	1.6e-19	34.4
WP_001206316.1\|3556611_3557403_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1	NA	NA	NA	NA
WP_000679427.1\|3557566_3557914_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
WP_000259031.1\|3557907_3558747_+	sulfonamide-resistant dihydropteroate synthase Sul1	NA	NA	NA	NA
WP_000050481.1\|3559151_3560693_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_012579084.1\|3560956_3561613_+	quinolone resistance pentapeptide repeat protein QnrA1	NA	NA	NA	NA
WP_001067855.1\|3561737_3562442_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000344784.1\|3562932_3563793_+	AAA family ATPase	NA	NA	NA	NA
WP_000287615.1\|3563843_3565388_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	1.0e-38	34.6
WP_001324342.1\|3565510_3567034_+\|transposase	IS21-like element IS1326 family transposase	A0A2L1IVA1	Escherichia_phage	1.2e-15	24.2
WP_001163403.1\|3567023_3567806_+	ATP-binding protein	A0A2L1IVB6	Escherichia_phage	2.5e-33	35.0
WP_000376623.1\|3568340_3568841_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_000259031.1\|3568968_3569808_-	sulfonamide-resistant dihydropteroate synthase Sul1	NA	NA	NA	NA
WP_052238321.1\|3569801_3570137_-	ethidium bromide resistance protein	NA	NA	NA	NA
WP_025999322.1\|3570029_3570395_+	hydrogenase maturation nickel metallochaperone HypA	NA	NA	NA	NA
WP_004193231.1\|3570398_3571274_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004236386.1\|3571384_3572524_+	class C beta-lactamase DHA-1	NA	NA	NA	NA
WP_000050481.1\|3573336_3574878_-\|transposase	IS91 family transposase	NA	NA	NA	NA

DBSCAN-SWA_14

3950679 : 4022962

Proteus_phage(34.62%)

integrase,tail,terminase,holin,head,tRNA,capsid,lysis,protease,portal

attL 3954225:3954256|attR 3994300:3994331

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_036934568.1\|3950679_3952089_-	replicative DNA helicase	A0A1B0VG30	Salmonella_phage	1.7e-192	75.4
WP_075673060.1\|3952242_3953226_+	quinone oxidoreductase	NA	NA	NA	NA
WP_156734255.1\|3953293_3954328_-\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
3954225:3954256	attL	NA	NA	NA	NA
WP_109402803.1\|3954424_3955507_+\|integrase	site-specific integrase	A0A1W6JP34	Morganella_phage	2.3e-170	79.7
WP_072065180.1\|3955560_3955848_+	DinI-like family protein	A0A1W6JP10	Morganella_phage	8.7e-08	31.8
WP_072065179.1\|3955891_3956137_-	pyocin activator protein PrtN	A0A1W6JP35	Morganella_phage	6.7e-25	70.7
WP_156734253.1\|3956194_3956590_-	chromosome partitioning protein ParB	S4TTI6	Salmonella_phage	3.7e-25	52.8
WP_156734251.1\|3956592_3957180_-	hypothetical protein	M1F3E2	Salmonella_phage	3.2e-33	44.7
WP_156734250.1\|3957172_3957874_-	hypothetical protein	A0A1W6JP46	Morganella_phage	1.6e-71	58.3
WP_156734248.1\|3957887_3958385_-	single-stranded DNA-binding protein	A0A220NRQ8	Escherichia_phage	5.3e-45	66.1
WP_156734246.1\|3958443_3959271_-	DUF2303 family protein	U5P439	Shigella_phage	3.2e-79	54.7
WP_006533955.1\|3959336_3959711_-	hypothetical protein	Q8HAA1	Salmonella_phage	4.6e-41	69.7
WP_072070916.1\|3960046_3960250_-	hypothetical protein	NA	NA	NA	NA
WP_156734244.1\|3960488_3961502_-	hypothetical protein	A4KWR9	Enterobacteria_phage	3.5e-59	37.5
WP_156734242.1\|3961591_3962248_-	helix-turn-helix domain-containing protein	A0A1W6JNY2	Morganella_phage	4.7e-89	74.9
WP_156734240.1\|3962344_3962572_+	helix-turn-helix domain-containing protein	A0A1C9IHV8	Salmonella_phage	2.3e-11	50.0
WP_156734238.1\|3962610_3963069_+	hypothetical protein	A0A1W6JP72	Morganella_phage	2.1e-27	45.4
WP_099660103.1\|3963355_3963535_+	DUF4222 domain-containing protein	A0A1W6JP38	Morganella_phage	6.2e-12	58.6
WP_156733234.1\|3963544_3964666_+	replication protein 15	K7PLZ7	Enterobacterial_phage	6.8e-48	57.2
WP_156733235.1\|3964662_3965301_+	phage N-6-adenine-methyltransferase	K7PGU4	Enterobacteria_phage	9.8e-84	66.7
WP_036904905.1\|3965297_3965690_+	hypothetical protein	NA	NA	NA	NA
WP_023582529.1\|3965689_3965860_+	hypothetical protein	NA	NA	NA	NA
WP_036904907.1\|3965922_3966306_+	RusA family crossover junction endodeoxyribonuclease	A0A1C9IIA0	Salmonella_phage	1.7e-27	53.7
WP_156733236.1\|3966324_3967131_+	KilA-N domain-containing protein	A0A1W6JP13	Morganella_phage	8.8e-90	62.1
WP_156733237.1\|3967127_3968153_+	DUF968 domain-containing protein	A0A1W6JP62	Morganella_phage	7.5e-86	45.9
WP_156733238.1\|3968180_3968861_+	hypothetical protein	A0A1W6JP37	Morganella_phage	5.2e-51	49.1
WP_041705231.1\|3969186_3969399_+	hypothetical protein	NA	NA	NA	NA
WP_156733239.1\|3969470_3969719_+	hypothetical protein	NA	NA	NA	NA
WP_099660111.1\|3970038_3970254_+	hypothetical protein	NA	NA	NA	NA
WP_058336245.1\|3970257_3970500_-	hypothetical protein	NA	NA	NA	NA
WP_004916901.1\|3970629_3971019_+	membrane protein	S4TRS4	Salmonella_phage	4.2e-13	35.0
WP_004918415.1\|3971015_3971309_+\|holin	phage holin family protein	NA	NA	NA	NA
WP_036976899.1\|3971295_3971628_+	M15 family peptidase	F1BUL3	Cronobacter_phage	4.4e-35	70.3
WP_156734430.1\|3971629_3972118_+\|lysis	lysis protein	A0A1P8DTG0	Proteus_phage	6.8e-53	90.2
WP_156734236.1\|3972934_3973246_+	hypothetical protein	NA	NA	NA	NA
WP_156734234.1\|3973235_3973613_+	hypothetical protein	A0A1P8DTD7	Proteus_phage	3.9e-32	59.7
WP_156734232.1\|3973676_3974024_+	HNH endonuclease	A0A1P8DTD1	Proteus_phage	5.9e-59	92.9
WP_156734230.1\|3974023_3974425_+	hypothetical protein	NA	NA	NA	NA
WP_099660116.1\|3974574_3975045_+\|terminase	phage terminase small subunit P27 family	A0A1W6JP17	Morganella_phage	2.8e-72	83.3
WP_156734229.1\|3975048_3976782_+\|terminase	terminase large subunit	A0A1P8DTK0	Proteus_phage	0.0e+00	97.9
WP_098943281.1\|3976791_3976971_+	hypothetical protein	A0A1B5FP99	Escherichia_phage	9.9e-10	57.4
WP_023582514.1\|3976970_3978200_+\|portal	phage portal protein	Q8W629	Enterobacteria_phage	1.7e-177	73.4
WP_156734227.1\|3978171_3978822_+\|head,protease	HK97 family phage prohead protease	Q8HAD3	Salmonella_phage	1.6e-94	79.5
WP_156734225.1\|3978835_3980044_+\|capsid	phage major capsid protein	U5P0G9	Shigella_phage	3.4e-154	69.0
WP_156734223.1\|3980139_3980448_+\|head,tail	phage gp6-like head-tail connector protein	A0A1B5FP86	Escherichia_phage	2.4e-11	40.2
WP_023582510.1\|3980444_3980768_+\|head	phage head closure protein	A0A1P8DTK6	Proteus_phage	5.0e-52	94.4
WP_156734222.1\|3980764_3981205_+	hypothetical protein	A0A1P8DTH7	Proteus_phage	3.5e-72	97.9
WP_156734220.1\|3981201_3981537_+	hypothetical protein	A0A1P8DTJ3	Proteus_phage	9.1e-57	98.2
WP_036913331.1\|3981601_3982069_+	hypothetical protein	A0A1P8DTJ5	Proteus_phage	1.3e-80	100.0
WP_088495895.1\|3982071_3982452_+\|tail	phage tail protein	A0A1P8DTJ2	Proteus_phage	7.9e-65	100.0
WP_023582505.1\|3982475_3982757_+	DUF4035 domain-containing protein	A0A1P8DTH5	Proteus_phage	3.4e-41	92.6
WP_156734218.1\|3982776_3986043_+\|tail	phage tail tape measure protein	A0A1P8DTH2	Proteus_phage	0.0e+00	83.5
WP_115350931.1\|3986045_3986378_+\|tail	phage tail protein	A0A1P8DTI9	Proteus_phage	1.9e-62	100.0
WP_156734216.1\|3986374_3987124_+\|tail	phage minor tail protein L	A0A1P8DTI3	Proteus_phage	3.2e-142	97.6
WP_156734486.1\|3987129_3987837_+	peptidase P60	A0A1P8DTI6	Proteus_phage	7.6e-138	97.9
WP_023582500.1\|3987927_3988428_+	hypothetical protein	A0A1P8DTJ8	Proteus_phage	1.9e-87	100.0
WP_115351040.1\|3988499_3989078_+\|tail	tail assembly protein	A0A1P8DTG7	Proteus_phage	1.3e-103	99.5
WP_156734214.1\|3989097_3992865_+	DUF1983 domain-containing protein	A0A1P8DTI4	Proteus_phage	0.0e+00	95.2
WP_156734212.1\|3992869_3994273_+	hypothetical protein	A0A1P8DTJ0	Proteus_phage	1.3e-144	64.1
WP_075673058.1\|3994572_3995160_+	CbrC family protein	NA	NA	NA	NA
3994300:3994331	attR	NA	NA	NA	NA
WP_156734210.1\|3995320_3996610_+	S8 family serine peptidase	Q2A0D0	Sodalis_phage	1.3e-29	33.1
WP_075673056.1\|3997154_3998270_+	spermidine/putrescine ABC transporter ATP-binding protein PotA	G3M9Y6	Bacillus_virus	9.9e-31	35.9
WP_023583058.1\|3998253_3999114_+	spermidine/putrescine ABC transporter permease PotB	Q6GZ02	Mycoplasma_phage	6.7e-11	25.7
WP_075673055.1\|3999110_3999890_+	spermidine/putrescine ABC transporter permease PotC	NA	NA	NA	NA
WP_075673054.1\|4000001_4001045_+	spermidine/putrescine ABC transporter substrate-binding protein PotD	NA	NA	NA	NA
WP_075673053.1\|4001181_4001493_-	helix-turn-helix transcriptional regulator	A0A1W6JNW5	Morganella_phage	5.6e-08	41.0
WP_075673052.1\|4001518_4002592_-	type 1 fimbrial protein	NA	NA	NA	NA
WP_099660502.1\|4002591_4003110_-	type 1 fimbrial protein	NA	NA	NA	NA
WP_156734208.1\|4003109_4005629_-	fimbria/pilus outer membrane usher protein	NA	NA	NA	NA
WP_075673049.1\|4005665_4006346_-	fimbria/pilus periplasmic chaperone	NA	NA	NA	NA
WP_075673048.1\|4006442_4007003_-	fimbrial protein	NA	NA	NA	NA
WP_075674389.1\|4007880_4008795_+	drug/metabolite DMT transporter permease	NA	NA	NA	NA
WP_075674388.1\|4009058_4010333_+	bifunctional O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase	A0A0B5JD48	Pandoravirus	2.6e-19	28.4
WP_156734207.1\|4010459_4011323_+	hypothetical protein	NA	NA	NA	NA
WP_075673542.1\|4011694_4012282_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_075673541.1\|4012308_4013169_+	winged helix family transcriptional regulator	NA	NA	NA	NA
WP_006536331.1\|4013168_4013687_+	hypothetical protein	NA	NA	NA	NA
WP_004249182.1\|4014363_4014642_+	BMC domain-containing protein	NA	NA	NA	NA
WP_006536329.1\|4014662_4014947_+	BMC domain-containing protein	NA	NA	NA	NA
WP_006536328.1\|4014961_4015240_+	BMC domain-containing protein	NA	NA	NA	NA
WP_075673540.1\|4015312_4016980_+	acetaldehyde dehydrogenase (acetylating)	NA	NA	NA	NA
WP_036934514.1\|4017006_4017270_+	EutN/CcmL family microcompartment protein	NA	NA	NA	NA
WP_075673539.1\|4017277_4018426_+	iron-containing alcohol dehydrogenase	NA	NA	NA	NA
WP_156734205.1\|4018482_4021911_+\|holin	choline trimethylamine-lyase	NA	NA	NA	NA
WP_075673537.1\|4022011_4022962_+\|holin	choline TMA-lyase-activating enzyme	NA	NA	NA	NA

DBSCAN-SWA_15

4187473 : 4213973

Geobacillus_virus(50.0%)

transposase,integrase

attL 4181826:4181840|attR 4198750:4198764

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4181826:4181840	attL	NA	NA	NA	NA
WP_156733366.1\|4187473_4187929_+\|transposase	IS200/IS605 family transposase	A0A0H3UZM0	Geobacillus_virus	2.5e-17	36.7
WP_075672706.1\|4188179_4188443_+	DUF1435 family protein	NA	NA	NA	NA
WP_075672705.1\|4188865_4189882_-	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	NA	NA	NA	NA
WP_075672704.1\|4190011_4190422_+	DNA polymerase III subunit psi	NA	NA	NA	NA
WP_075672703.1\|4190390_4190837_+	ribosomal protein S18-alanine N-acetyltransferase	NA	NA	NA	NA
WP_036973667.1\|4191507_4191600_+	peptide chain release factor 3	NA	NA	NA	NA
WP_000127615.1\|4192038_4192227_+	hypothetical protein	NA	NA	NA	NA
WP_000211147.1\|4192372_4194391_+	DNA mismatch repair protein	NA	NA	NA	NA
WP_001218618.1\|4194520_4195762_-\|integrase	integrase family protein	A0A291AWU1	Escherichia_phage	1.3e-76	39.8
WP_001995600.1\|4195763_4196033_-	hypothetical protein	NA	NA	NA	NA
WP_000497807.1\|4196035_4197010_-	ParM/StbA family protein	NA	NA	NA	NA
WP_000348524.1\|4197474_4197918_+	hypothetical protein	NA	NA	NA	NA
WP_156734129.1\|4200091_4203070_+\|transposase	Tn3 family transposase	NA	NA	NA	NA
4198750:4198764	attR	NA	NA	NA	NA
WP_001120888.1\|4203487_4204981_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_078081115.1\|4205490_4206366_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_001255015.1\|4207430_4207736_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_001120888.1\|4207847_4209341_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_082987283.1\|4209371_4209617_+	hypothetical protein	NA	NA	NA	NA
WP_044502095.1\|4209911_4210289_+	hypothetical protein	NA	NA	NA	NA
WP_064754130.1\|4210285_4211449_+	tetracycline-inactivating monooxygenase Tet(X)	NA	NA	NA	NA
WP_077782102.1\|4211466_4212327_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_156734112.1\|4212989_4213973_+\|transposase	IS1595 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr_ID: NZ_CP047340.1|WP_156733160.1|2160837_2161083_+|hypothetical-protein

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Acr_ID: NZ_CP047340.1|WP_156734238.1|3962610_3963069_+|hypothetical-protein

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Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP047340.1|WP_156733160.1|2160837_2161083_+|hypothetical-protein

2160837_2161083_+

81 aa aa

2116595-2168880

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP047340_2	TypeI-F	2.1\|710089\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	710089-710120	32	2132501-2132532	2
NZ_CP047340_2	TypeI-F	2.3\|710209\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	710209-710240	32	2130908-2130877	1

1. spacer 2.1|710089|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047340 position: 2132501-2132532, mismatch: 2

ttgctgattgataacgcctaaatgttcgaggt	CRISPR spacer
ttgctgattgataacacctaaatgttcaaggt	Protospacer
***************.***********.****

2. spacer 2.3|710209|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047340 position: 2130908-2130877, mismatch: 1

aagaaggtttagcaccatcagttgatgagaaa	CRISPR spacer
aagaagggttagcaccatcagttgatgagaaa	Protospacer
******* ************************

NZ_CP047340.1|WP_156734238.1|3962610_3963069_+|hypothetical-protein

3962610_3963069_+

152 aa aa

3950679-4022962

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP047340_2	TypeI-F	2.21\|711289\|32\|NZ_CP047340\|PILER-CR,CRISPRCasFinder,CRT	711289-711320	32	3983135-3983166	0

1. spacer 2.21|711289|32|NZ_CP047340|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047340 position: 3983135-3983166, mismatch: 0

aaagaacaggcacatcgattgcagcgaatacg	CRISPR spacer
aaagaacaggcacatcgattgcagcgaatacg	Protospacer
********************************

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP047340

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

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