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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP049088 Glaesserella parasuis strain sHPS7 chromosome, complete genome 1 crisprs DEDDh,PD-DExK,DinG,cas3,cas2 0 0 9 0

Results visualization

1. NZ_CP049088
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP049088_1 1946826-1946938 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 561 : 50055 56 Haemophilus_phage(38.71%) integrase,plate,tail,protease,transposase attL 17579:17602|attR 33563:33586
DBSCAN-SWA_2 112564 : 122328 9 Ostreococcus_lucimarinus_virus(12.5%) tRNA NA
DBSCAN-SWA_3 364342 : 459512 96 Haemophilus_phage(70.15%) portal,integrase,tRNA,terminase,tail,plate,transposase,capsid,head attL 357222:357237|attR 463727:463742
DBSCAN-SWA_4 540106 : 556639 18 Mannheimia_phage(94.12%) tail NA
DBSCAN-SWA_5 559841 : 573063 24 Mannheimia_phage(68.42%) terminase NA
DBSCAN-SWA_6 578848 : 590366 20 Mannheimia_phage(54.55%) integrase attL 587838:587851|attR 590448:590461
DBSCAN-SWA_7 1186133 : 1230232 40 Bacillus_phage(27.27%) protease,transposase,tRNA NA
DBSCAN-SWA_8 1238649 : 1282792 59 Haemophilus_phage(22.86%) transposase,tail,plate,head NA
DBSCAN-SWA_9 2262148 : 2274717 16 Mannheimia_phage(86.67%) tail NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage