CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_AP022561	Mycolicibacterium aichiense strain JCM 6376	2 crisprs	cas3,csa3,cas4,WYL,DEDDh,DinG,RT	0	0	2	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_AP022561_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP022561_1

1424601-1424707

Orphan

Consensus_repeat	Method
CCGCCGGTGTAGCTGGACGGGCCGCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP022561_1

>merge|NZ_AP022561|1|1424601-1424707|CRISPRCasFinder
CCGCCGGTGTAGCTGGACGGGCCGCCCACTCCGACGCTGGCTCCGGTGCAGTGCTGGTGGCACAGGTTGTTCGACGTCGAACCGCCGGTGTAGCTCGACGGGCCGCC

>NZ_AP022561|1|1|1424601-1424707|CRISPRCasFinder
CCGCCGGTGTAGCTGGACGGGCCGCC	CACTCCGACGCTGGCTCCGGTGCAGTGCTGGTGGCACAGGTTGTTCGACGTCGAA
CCGCCGGTGTAGCTCGACGGGCCGCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP022561.1\|WP_115316648.1\|1413183_1416321_+\|ATP-dependent-helicase	unknown	unknown	gnl\|CDD\|223288
NZ_AP022561.1\|WP_115316644.1\|1422036_1422288_-\|mycoredoxin	unknown	unknown	gnl\|CDD\|131255
NZ_AP022561.1\|WP_115316641.1\|1424989_1425427_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP022561.1\|WP_115316636.1\|1431837_1434840_+\|UPF0182-family-protein	unknown	unknown	gnl\|CDD\|234609
NZ_AP022561.1\|WP_115316634.1\|1435760_1436399_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP022561.1\|WP_115318770.1\|1428296_1429103_-\|TOMM-precursor-leader-peptide-binding-protein	unknown	unknown	gnl\|CDD\|274832
NZ_AP022561.1\|WP_115316647.1\|1416317_1419551_+\|ATP-dependent-helicase	unknown	unknown	gnl\|CDD\|223288
NZ_AP022561.1\|WP_115316640.1\|1425602_1426097_-\|thiol-peroxidase	unknown	unknown	gnl\|CDD\|179055
NZ_AP022561.1\|WP_115316651.1\|1411062_1411917_+\|TIGR02569-family-protein	unknown	unknown	gnl\|CDD\|131620
NZ_AP022561.1\|WP_170310583.1\|1412340_1413126_-\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_AP022561.1\|WP_147291941.1\|1426303_1426501_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP022561.1\|WP_115318771.1\|1426927_1428295_-\|AarF/ABC1/UbiB-kinase-family-protein	unknown	unknown	gnl\|CDD\|223733
NZ_AP022561.1\|WP_115316646.1\|1420035_1421112_+\|potassium-channel-protein	unknown	unknown	gnl\|CDD\|367001
NZ_AP022561.1\|WP_170310584.1\|1422351_1424454_+\|UvrD-helicase-domain-containing-protein	unknown	unknown	gnl\|CDD\|223288
NZ_AP022561.1\|WP_115316645.1\|1421050_1422034_+\|NAD(+)-diphosphatase	unknown	unknown	gnl\|CDD\|234699
NZ_AP022561.1\|WP_102807412.1\|1419525_1419936_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226720
NZ_AP022561.1\|WP_115316635.1\|1434852_1435764_+\|ribonuclease-Z	unknown	unknown	gnl\|CDD\|234602
NZ_AP022561.1\|WP_115316650.1\|1412041_1412338_-\|MGMT-family-protein	unknown	unknown	gnl\|CDD\|226219
NZ_AP022561.1\|WP_115316638.1\|1426637_1426907_+\|WhiB-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|376791
NZ_AP022561.1\|WP_115316637.1\|1430711_1431734_+\|PDZ-domain-containing-protein	unknown	unknown	gnl\|CDD\|226011

Protein	Function_ID	Function_description	E-value
NZ_AP022561.1\|WP_115316648.1\|1413183_1416321_+\|ATP-dependent-helicase	gnl\|CDD\|223288	COG0210, UvrD, Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair].	1.15507e-53
NZ_AP022561.1\|WP_115316644.1\|1422036_1422288_-\|mycoredoxin	gnl\|CDD\|131255	TIGR02200, conserved_hypothetical_protein, Glutaredoxin-like protein. This family of glutaredoxin-like proteins is limited to the Actinobacteria and contains the conserved CxxC motif.	1.25938e-32
NZ_AP022561.1\|WP_115316636.1\|1431837_1434840_+\|UPF0182-family-protein	gnl\|CDD\|234609	PRK00068, PRK00068, hypothetical protein; Validated.	0
NZ_AP022561.1\|WP_115318770.1\|1428296_1429103_-\|TOMM-precursor-leader-peptide-binding-protein	gnl\|CDD\|274832	TIGR03882, hypothetical_protein, bacteriocin biosynthesis cyclodehydratase domain. This model describes a ThiF-like domain of a fusion protein found in clusters associated with the production of TOMMs (thiazole/oxazole-modified microcins), small bacteriocins with characteristic heterocycle modifications. This domain is presumed to act as a cyclodehydratase, as do members of the SagC family modeled by TIGR03603.	8.83444e-05
NZ_AP022561.1\|WP_115316647.1\|1416317_1419551_+\|ATP-dependent-helicase	gnl\|CDD\|223288	COG0210, UvrD, Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair].	1.03882e-107
NZ_AP022561.1\|WP_115316640.1\|1425602_1426097_-\|thiol-peroxidase	gnl\|CDD\|179055	PRK00522, tpx, thiol peroxidase.	4.81133e-94
NZ_AP022561.1\|WP_115316651.1\|1411062_1411917_+\|TIGR02569-family-protein	gnl\|CDD\|131620	TIGR02569, conserved_hypothetical_protein, TIGR02569 family protein. This protein family is found, so far, only in Actinobacteria, including as least five species of Mycobacterium, three of Corynebacterium, and Nocardia farcinica, always in a single copy per genome. The function is unknown. [Hypothetical proteins, Conserved].	2.66266e-130
NZ_AP022561.1\|WP_170310583.1\|1412340_1413126_-\|alpha/beta-fold-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	5.01561e-21
NZ_AP022561.1\|WP_115318771.1\|1426927_1428295_-\|AarF/ABC1/UbiB-kinase-family-protein	gnl\|CDD\|223733	COG0661, AarF, Predicted unusual protein kinase [General function prediction only].	1.11147e-125
NZ_AP022561.1\|WP_115316646.1\|1420035_1421112_+\|potassium-channel-protein	gnl\|CDD\|367001	pfam02254, TrkA_N, TrkA-N domain. This domain is found in a wide variety of proteins. These protein include potassium channels, phosphoesterases, and various other transporters. This domain binds to NAD.	1.27576e-23
NZ_AP022561.1\|WP_170310584.1\|1422351_1424454_+\|UvrD-helicase-domain-containing-protein	gnl\|CDD\|223288	COG0210, UvrD, Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair].	2.50182e-111
NZ_AP022561.1\|WP_115316645.1\|1421050_1422034_+\|NAD(+)-diphosphatase	gnl\|CDD\|234699	PRK00241, nudC, NAD(+) diphosphatase.	2.35465e-116
NZ_AP022561.1\|WP_102807412.1\|1419525_1419936_-\|hypothetical-protein	gnl\|CDD\|226720	COG4270, COG4270, Predicted membrane protein [Function unknown].	3.10098e-16
NZ_AP022561.1\|WP_115316635.1\|1434852_1435764_+\|ribonuclease-Z	gnl\|CDD\|234602	PRK00055, PRK00055, ribonuclease Z; Reviewed.	3.4289e-115
NZ_AP022561.1\|WP_115316650.1\|1412041_1412338_-\|MGMT-family-protein	gnl\|CDD\|226219	COG3695, COG3695, Predicted methylated DNA-protein cysteine methyltransferase [DNA replication, recombination, and repair].	2.68195e-27
NZ_AP022561.1\|WP_115316638.1\|1426637_1426907_+\|WhiB-family-transcriptional-regulator	gnl\|CDD\|376791	pfam02467, Whib, Transcription factor WhiB. WhiB is a putative transcription factor in Actinobacteria, required for differentiation and sporulation.	5.10543e-15
NZ_AP022561.1\|WP_115316637.1\|1430711_1431734_+\|PDZ-domain-containing-protein	gnl\|CDD\|226011	COG3480, SdrC, Predicted secreted protein containing a PDZ domain [Signal transduction mechanisms].	2.88455e-136

>NZ_AP022561.1|WP_170310584.1|1422351_1424454_+|UvrD-helicase-domain-containing-protein
MPVTVDHLTGLDDEQREAVLAARGPLCVLAGAGTGKTRTITHRIAHLVANGHVAAGQVLAVTFTSRAAGEMRSRLRAMDAQNMGAPVGSVQALTFHAAALRQLRYFWPRVVGDTGWQLLDTKFSVVAQAASRARLQVSTDDVRDLAGEIEWAKASLISPEGYAAAVAKIQRDIPLDAAKVATVYAGYEKLKANRDGIALLDFDDLLLHTAGAIENDAAVAAEFRDRYRCFVVDEYQDVTPLQQRVLDAWLGNRDDLTVVGDANQTIYSFTGASPRYLLDFSRQFPDATVVRLERDYRSTPQVVSLANRVIAAARGRVAGSKLHLIGQREPGPSPTFHEHPDEVAEAASVARSIKRLVESGTPAAEIAVLYRINAQSEAYEEALTEAGIPFQVRGGEGFFSRQEIRQSLLALQRAAERSVGEEGPLPEVVRHILEPLGLTDEPPAGTKARERWEALTALADLVDDEVAARPQLDLPALVAELRVRADARHPPVVQGVTLASLHAAKGLEWDAVFLVGLADGTLPISHALAHGPDSEAVEEERRLLYVGITRARMHLELSWALARTPGGRQGRRPSRFLNGIAPQTQAEPTPTRPRKQKGATPRCRVCNAVLSSAPSIMLRRCETCSVDIDDELLGQLKDWRLRVAKELKVPAYVVFTDNTLIAIAESLPADDAALVAIPGIGARKLEQFGPDVLELVRARQ
>NZ_AP022561.1|WP_115316644.1|1422036_1422288_-|mycoredoxin
MSGNDPQLTMYSTVWCGYCKRLKTALKSAGIAFTEVDIEHDPDAAKFVMSVNNGNQTVPTLKFADGSALTNPSLKDVQAKLAS
>NZ_AP022561.1|WP_115316645.1|1421050_1422034_+|NAD(+)-diphosphatase
MSTPWKPPTGCSTSAPPEKTDHVAFRLRNVPLLSRVGADRADHLRTDVDAAIAGWADAALLRVDHRNQVMVADGRVSLTAAAKHADTPPADAVFLGRLEDGRHVWAVRAALEAPEHGEGEVSDLRRGGQQIDDVSAQLLASALALLNWHEHARYSAVDGSPTKLVKAGWSRLNPLTGHEEFPRIDPAIIVLIHDGHDRAVLARQTVWPQRLFSLLAGFVEAGESFESCVVREVNEEIGLSVRDVEYLGSQPWPFPRSLMVGFHAIGDPEQEFVFHDGEIAEAAWFTRAEVREALEHGDWSSDSSSKLLLPGSISIAREIIESWAAQE
>NZ_AP022561.1|WP_115316646.1|1420035_1421112_+|potassium-channel-protein
MAKGRLRRRLEAIDENLAAKPDSALVDYLHIPEKFVSPGRRIARRLIYALTALFLAVFIVYLDRDGYRDVRDGPLTFLDCLYYATVSLSTTGYGDITPYTETARLVNVLVITPLRVAFLIVLVGTTVETLTTASRQALKIQRWRNSVRNHTVVIGYGTKGRTAVAAMIGDGVAPADIVVVDTDQTSLDRANAAGLVTVRGDANKSDVLRLAGAQHANSIIVATNSDPTAVLVTLTARELAPKAKIIAAVREAENQHLLRQSGADSVVVSSETAGRLLGIATTTPSVVEMIEDLLTPDAGFAIAEREVEHKEVGGSPRHLPDIVLGVVRDGKLLRVDDPNVDALETTDRLLYVRATGED
>NZ_AP022561.1|WP_102807412.1|1419525_1419936_-|hypothetical-protein
MPTTTTELEPSRSPSQLPAYRAALMLIGIGVGHFVAPKPFDEIVPAELPGDARFYTYASGVAEVGIGTMLLVPRTRRAAALFAIALYLAVFPANVNMCRLWKDKPLPMKLVALARLPLQIPMITQALAIRRNAPRY
>NZ_AP022561.1|WP_115316647.1|1416317_1419551_+|ATP-dependent-helicase
MTYSPVELAQALGLPTPTDEQAAVIAAPPGPLVVIAGAGAGKTETMAARVVWLVANGFADPGQVLGLTFTRKAAGQLLRRVRSRLARLAGHLGGAASQGAPTVSTYHAFAGALLREYGPLLPVEPDARLLSETELWQLAFEVVSGYPGPLDTAKDPAGVTAMVLKLSGELAEHLVDTEQLMDTHLELDRLVHHLPAGRYQRDRGPSQFLLSMLATQTERTALVPLIDALHARMRADKVMDFGSQMSAAARLASTCPQVGEQLRGRYRVVLLDEYQDTGHAQRIALSSLFGAGADEGLALTAVGDPIQSIYGWRGASATNLPRFTTDFPQADGSPAPTLELRTSWRNPPTTLHIANEISAEARRRSVAVQALRARPGAEAGTVRCALLTDVASEREWVADHIAARYADAAADNSEPPTAAVLVRRNADAGPIAGALSARGVPVEVVGLAGLLSIPEVADVAAMVRLVADPAAGGAAMRVLTGPRWQLGAADLAALWRRAMAIDGSRQAAVTAEEIIASAAPDADTASLADALADPGPAAGYSPEGHRRITELAGELARLRTLLGHPVTELVGEVRRVLGVDVEVRAARPVAAGWAGAEHLDRFADVVADYAARPGACINGLLTYLDAAAVVENGLAPAEVSVATGRVQVLTVHAAKGLEWQVVAVPHLSARVFPSTASKRTWLSDPADLPPLLRGDRAAAGLHGVPVLDTERVTDRKALSDSIMAHKKQLEQRRLDEERRLLYVAITRAEDTLLLSGHHWGSTESTPRGPSDFLREIKDIIDAADVAGQPCGVVEQWAPDPADGERNPLRDSVREAVWPADPLGRTRADIEEGAALVRSALAGAIPDSVEDPENWAADVDALLAERARIAAPPPVQLPGQLSVSALVELDRDPAALRRLTRRLPSRPDPHAILGTAFHEWVQRFYGAERLFDLDDLPGAVDGAATETAELAVLQDAFTKSQWAARTPVDVEVPFEMAIGDTVVRGRIDAVFADPDGGMTVVDWKTGEPPGDEDAKRHAAVQLAVYRLAWAAIRNCPEAHVRAAFHYVRAGVTVAPENLSGPEELVALLAGVSSGERCA
>NZ_AP022561.1|WP_115316648.1|1413183_1416321_+|ATP-dependent-helicase
MTTALLARATEPADVLRPDLRGTVRIVGGPGTGKTSLLVAAAAAHITAGTEPESVLLLTGSGRLAAATRSALTARLLAARSAEPCRAVVREPLVRSVHSYAFAVLRQAAARAGDPPPRLVTGAEQDGIIRELLAGDLEDGDVSASRWPQVLRPALTTGGFANELRDLLARCAERGVDPQHLQRLGRLSGRPEWAAAGRFAQQYEQVMLLRAAVGTAAPQATVPALGAAELVGAALEALASDPELLAAERSRIRLLLIDDAQHLDPQAARLVRVLAAGAELTLLAGDPNQAVFGFRGADPAVLTAADTPVVELGRSHRCSPAVARAISGIAAGLPGNSAWRVLDGNASQAGDDGSVSVRIAGSAHAEAALIADTLRHAHLVDGVPWSQLAVIVRSPSAAAALPRALAGAGVPVDAAQLAGPVAEQPAAQALLGVLAATADGLTGEQAVALLTGPIGRVDPVTLRQLRRALRRGGDGDFGEQLVAALTSGPVDLPATLARPVNRVRAVLAAAARGHRGHRDPRYTLWQAWERSGLQRRWLSAAERGGTDGALAERNLHAITALFDIADDYVTRTTGASLRGLVDHVAGLQLPPVSVDGRTGSETVAVLSPHAALDRDWDLVVIAGVQDGLWPNTTPRGGVLGTQRLLDVLDGLGDDVSARAPLLAEERRLLIAAMGRARRGLLITAVDSDAGDDAALPSPFVAELEAYVSADDVRPAQPVVAPPVLAPAAVVGRLRAVVCAPAGTVTDGERATAAQQLARLAADGVAGADPAQWYGMTPVSTVEPLWSGDQHTVALSPSIVQTLTDCPLRWLAERHGGVERRDLRSTLGSVVHALIADSATSAEQLVVELEKLWKTIPFDSTWYADNELDRHRAMLEAFVAWRSATRHELTEIGTEVAVDGVIAEPGEGQPGVRVRGRVDRLERDAEGRLVIVDVKTGKSPVTKDDAQRHAQLGLYQLAIAEGALADGDSPGGGRLVYVAKPSASGATEREQSALTADSTAQWRQTVRQAAAATAGPQFVARVNDGCAHCPMRPSCPAHTAPRTEQQ
>NZ_AP022561.1|WP_170310583.1|1412340_1413126_-|alpha/beta-fold-hydrolase
MTHDLHVHRFGPPGPIRILAIHGLTGHGRRWRALSENHLPEYAMAAPDLIGHGRSSWSAPWTIDANVAALANLVHNDADGPVLVVGHSFGGAIALNLAAAYPDLVSGLVLLDPAIGLDGQWMREIADSMLSSPDYPDRDEARTEKFSGSWADVDPAELDEDLDEHLVALPNGRVGWRICVPAMMSYWSELARDIALPRTGTPTTLVRAQWTDPPYVSAELLDALSDRLGDDFTLVDFDCQHMVPHAKPEETAKVIRDLLEP
>NZ_AP022561.1|WP_115316650.1|1412041_1412338_-|MGMT-family-protein
MAPITDAHVERVRELVASIPAGRVATYGDIASAAQLSSPRIVGWIMRTDSSDLPWHRVITASGRPAAHLVTRQLELLRAEGVLADDGRVNLAHARHEF
>NZ_AP022561.1|WP_115316651.1|1411062_1411917_+|TIGR02569-family-protein
MSDERPPEHVLAAFGLKGHDPEPLGAGWEGGFKCGEVVLSVIADHARAAWSAKARETLFVDGVRLARPVRSTDGRYVVSGWRADTFVAGSPEPRHDEVVSAGVRLHEATAKLERPRFLTQAPVAPWSDVDVFIAADRAAWEERPLHSLPPGALVAPGSADGERSVELINQLAVLRKPTKSPNQLVHGDLYGTVLFAGTAAPGITDITPYWRPASWAAGVVVVDALAWGEADDGLIERWDALPEWPQMLLRALMFRLAVHALHPRSTAAAFPGLARTAALIRLVL
>NZ_AP022561.1|WP_115316641.1|1424989_1425427_-|hypothetical-protein
MNKKRTILAHVVVCAAMASVSGLPIASASPDWTPADGESGAVTGAGGRPSLGVGGTSSYTGGSTSNSFCGDPSTYTGQPTTPICTGASVGVGGPSSYTGGSTANNPQNTASLGVGDVNSYTGQGTSGNTLNGTNTTTRTINYGPG
>NZ_AP022561.1|WP_115316640.1|1425602_1426097_-|thiol-peroxidase
MAQITLRGNPINTVGDLPAVGDQAPAFTLTGTDLGDLDSSQFDGKALVLNIFPSVDTPVCATSVRTFNERAAATGAPVVNISKDLPFALKRFCGAEGIENAVAASAFRSSFGEDFGITITDGPMAGLLGRAVVVVGADGKVAYTELVPEIGQEPDYDAAVAALG
>NZ_AP022561.1|WP_147291941.1|1426303_1426501_+|hypothetical-protein
MISSTTNYGVAAVARRAWSFRAVMAMPAHHAFAAHAAGAAAAISAQRKRRVNAAPTIASVDRSFI
>NZ_AP022561.1|WP_115316638.1|1426637_1426907_+|WhiB-family-transcriptional-regulator
MSASTVRQEKLPVLPCHDGNPDLWFAESPMELERAKVLCGDCPIRRQCLAAALDRGEPWGVWGGEIIERGSIVERKRPRGRPRKDVIAA
>NZ_AP022561.1|WP_115318771.1|1426927_1428295_-|AarF/ABC1/UbiB-kinase-family-protein
MHGCQETAVRDDGLVADIKRGRAARNVKLATIPVGFAGRAALGLGKRLTGKSKDEVQAELLEKAANQLFTVLGELKGGAMKVGQALSVMEAAIPPEFGEPYREALTKLQKDAPPLPAAKVHRVLDGQLGTKWRERFQSFDDTPVASASIGQVHKGVWSDGREVAVKIQYPGADEALRADLKTMQRLVSVFKQLAPGADVEGVVDELIERTEMELDYRLEADNQRAFAKAYQGHPHFVVPHVVASSPKVMISEWIDGIPMAQIIRDGTPDERDLCGTRLIELTFDAPARLGMIHGDAHPGNFMMLPDGRMGVIDFGAVGPLPDGLPVEIGQIICLARDKKYDELLPAMERVGFIQKGEQVSVREIDDMLRQYVEPIEVDVFHYTRRWLQKMAAANMNVSAEQIRTARAMDLPAKLAIPLRVIASTVAISCQLDAHVPTRELAAKFVPGFVEPEPAH
>NZ_AP022561.1|WP_115318770.1|1428296_1429103_-|TOMM-precursor-leader-peptide-binding-protein
MPVLLRPDDAVQVGWDPRRAVLVRPPEGVTPAALASLLRGMQVPLGKTELRRLAATHGLAESLDQLLDALETSGVVRGRARPTAARALSIRVHGSGPLAELLVEALRCSGARIAQTSHTGAALSTARADMVVLTDYLVADPRLVRDLHTIGVPHLPVRVRDGAGLVGPLVIPGVTSCLGCADLHRTDRDGAWPAVAAQLRDVIGTADRPTVLATAAVALGQLQRIITAVRGQEAAGAPPTTLNTTLQVDVSNNTITARRWSRHPRCEC
>NZ_AP022561.1|WP_115316637.1|1430711_1431734_+|PDZ-domain-containing-protein
MNRRILTLLTALVPIVVFGVLLAVVTVPYVSLGPGPTFDTLGEVDGKPVVAIDGTETHPTSGHLNMTTVAQRDGLTLGQALTLWVSGREQLVPRDLVFPPDKSREDVEKDQDADFKRSEDSAEYAALGYLKYPSAVRVEKVNDPGPSAGKLQDGDAIDAVDGKPVANLAEFTTLLKATKPGQEIAIDYRRKNGPPGVARITLGNNQDRDYGYLGVAVLDAPWAPFKIDFNLANIGGPSAGLMFSLAVIDKLTTGDLNGSKFIAGTGTISADGKVGPIGGITHKMLAAQEAGASVFLVPAENCDEAKSMRDDNMELVKVDTLSTAVDSLHTLTSGGRPPSC
>NZ_AP022561.1|WP_115316636.1|1431837_1434840_+|UPF0182-family-protein
MSMRPGARMPKLTRRSRILIGIALTVVALLLVGPRLVDTYVDWLWFGELGYRSVFSTVLVTRLVVFLVAALAVGAIVFAGLALAYRTRPVFVPTVGPNDPVARYRTAVMARLRLFGIGVPTVIGVLSGAVAQSYWARVQLFLHGGDFGITDPQFGKDLGFYAFDLPFYRLVLSYLFVALFLAFLANLIGHYIFGGIRLAGRSGVLSRPARIQLVALIGTLVLLKAVAYWFDRYELLSHTRGGKPFTGAGYTDINAVLPAKLILLAIALICAAAVFSALVLRDLRIPAIGLVLLLLSSLIVGAGWPLVVEQISVKPNAAQKESEYISRSIAATRQAYGLTGDHVTYRDYSGTAPTTAQQVASDRATTSNIRVLDPTIISPAFTQFQQGKNFYYFPDQLSIDRYKSPDGELRDYVVAARELNPDRLQDNQRDWINRHTVYTHGNGFIASPANTVRGIANDPNQNGGYPEFLASVVGANGNVVSPGPAPLDQPRVYFGPVISNTAADYAIVGKNGADREYDYETNTDTKNYTYTGAGGVPIGNWLARSVFAAKFAERNFLFSNVIGSNSKILFNRDPAQRVEAVAPWLTTDSTVYPAIVNKRMVWVIDGYTTLDNYPYSELTSLSSATADSNEVAVNRLAPDKQVSYIRNSVKATVDAYDGTVTLYAQDESDPVLKAWMAVFPGTVKPKSDITPDLAAHLRYPEDLFKVQRMLLAKYHVDDPVTFFSTSDFWDVPLDPNPTASSYQPPYYIVAKDLARNTDSSSFQLTSAMNRFRRDFLAAYISASSDPDTYGRITVLTIPGQVNGPKLAFNAISTDTAVSQDLGVIGRDNQNRIRWGNLLTLPVGQGGLIYVSPVYASPGSSDAASSYPRLIRVAMMYNDKVGYGPTVSTALDGIFGAGAGATATGPAPATPPPGGQPPGSRPPAAPAPVPGSAPEVPTPVAGVPATPGVPTTLSPAKSAALTDVETALGAVQEAQKNGNFADYGDALQRLDDAMKKYESAK
>NZ_AP022561.1|WP_115316635.1|1434852_1435764_+|ribonuclease-Z
MRELVVLGTASQVPTRYRNHNGYLLRWDDEGILFDPGEGTQRQMMLAGVSVSAVNRLCLTHFHGDHCLGVPGIIQRASLDQVNHPLVAHFPASGGEYFERLRHASVFYDRVEVREEPVSVAGVVATGPFGVLEAAALEHSTDVFGYRLVEPDGRRFIPELLSHFGISGPAVSELERAGTLRVGDRVVAVADVSEPRPGQRFAFVMDTRLCDGVYALADGADMLVIEATFLTEDEDLAHWYGHLTARQAAAVASECGVRTLVLTHFSQRYVDAAARYAEEAAGVFSGELVVAEDLMRVPVPARR
>NZ_AP022561.1|WP_115316634.1|1435760_1436399_-|hypothetical-protein
MKRKHATRFAAATMITAATLGLTSCDNESGLDTSKPAASIPALPGVSATTTTTKTKPASAPVDYTRLLLQARDISATGDAYVDQPPTANPDSRPGAEVLFVNEEQTKAVSILLVALDNPADGPSALAEAQAGLKKAVTPGPPQSSIVGTGGTVVAGNSPDGTKSVSVLLFTEGSTLARIEFDGLPGQPAGADFVTNVGQKQAIALRVGLPTP

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Crispr_ID: NZ_AP022561_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP022561_2

4402087-4402291

Orphan

Consensus_repeat	Method
GAACAGGCCGGCCGCGCCACCGTCGCCACC	PILER-CR

2 spacers

The CRISPR arrays of NZ_AP022561_2

>merge|NZ_AP022561|2|4402087-4402291|PILER-CR
GCCGCCGTCGCCACCGGTTGCTCCGATCGGGATCGCGTTGCCGCCCTTGCCCGCAGCGCCACCGCTGCCGTAGTACAGGCCTGCGGCGCCACCGTTGCCACCCTGGCCGCCGGTACCGCCCTCCGCGGCTTCGCCGGCGAGAACACCGCCCGCGCCGCCCTTGCCGCCGTTGCCGAACATGCCGGCCGCGCCACCGTCGCCACCT

>NZ_AP022561|2|1|4402087-4402291|PILER-CR
GCCGCCGTCGCCACCGGTTGCTCCGATCGGGA	TCGCGTTGCCGCCCTTGCCCGCAGCGCCACCGCTGCCGTAGTACAGGCCTGCGGCG
CCACCGTTGCCACCCTGGCCGCCGGTACCGCC	CTCCGCGGCTTCGCCGGCGAGAACACCGCCCGCGCCGCCCTTGCCGCCGTTGCCGAACATGCCGGCCGCGCC
ACCGTCGCCACCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP022561.1\|WP_115321688.1\|4403165_4403453_+\|4a-hydroxytetrahydrobiopterin-dehydratase	unknown	unknown	gnl\|CDD\|234845
NZ_AP022561.1\|WP_163789366.1\|4409221_4409419_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP022561.1\|WP_163789364.1\|4409054_4409225_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP022561.1\|WP_115321689.1\|4403427_4404714_-\|mannosyltransferase	unknown	unknown	gnl\|CDD\|172015
NZ_AP022561.1\|WP_115321681.1\|4392255_4394166_-\|ABC-transporter-family-substrate-binding-protein	unknown	unknown	gnl\|CDD\|173866
NZ_AP022561.1\|WP_115321684.1\|4397051_4398131_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP022561.1\|WP_147292067.1\|4404822_4405431_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223021
NZ_AP022561.1\|WP_115321685.1\|4398140_4399355_-\|cytochrome-P450	unknown	unknown	gnl\|CDD\|225035
NZ_AP022561.1\|WP_115321683.1\|4396782_4397055_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP022561.1\|WP_115322053.1\|4388875_4389880_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|183450
NZ_AP022561.1\|WP_115321680.1\|4391291_4392236_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP022561.1\|WP_115321693.1\|4409435_4409705_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP022561.1\|WP_147292066.1\|4390197_4391163_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237019
NZ_AP022561.1\|WP_005147085.1\|4408079_4408226_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP022561.1\|WP_115321686.1\|4399367_4399754_-\|NUDIX-domain-containing-protein	unknown	unknown	gnl\|CDD\|239517
NZ_AP022561.1\|WP_115322054.1\|4405460_4406543_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223021
NZ_AP022561.1\|WP_036343786.1\|4394185_4396084_-\|translational-GTPase-TypA	unknown	unknown	gnl\|CDD\|224138
NZ_AP022561.1\|WP_115321691.1\|4406605_4408006_+\|wax-ester/triacylglycerol-synthase-family-O-acyltransferase	unknown	unknown	gnl\|CDD\|274360
NZ_AP022561.1\|WP_115321694.1\|4409704_4409920_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP022561.1\|WP_115321682.1\|4396080_4396707_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_AP022561.1\|WP_115321688.1\|4403165_4403453_+\|4a-hydroxytetrahydrobiopterin-dehydratase	gnl\|CDD\|234845	PRK00823, phhB, pterin-4-alpha-carbinolamine dehydratase; Validated.	1.79972e-36
NZ_AP022561.1\|WP_147292066.1\|4390197_4391163_+\|hypothetical-protein	gnl\|CDD\|237019	PRK11907, PRK11907, bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase.	0.0055368
NZ_AP022561.1\|WP_115321689.1\|4403427_4404714_-\|mannosyltransferase	gnl\|CDD\|172015	PRK13375, pimE, mannosyltransferase; Provisional.	0
NZ_AP022561.1\|WP_115321686.1\|4399367_4399754_-\|NUDIX-domain-containing-protein	gnl\|CDD\|239517	cd03425, MutT_pyrophosphohydrolase, The MutT pyrophosphohydrolase is a prototypical Nudix hydrolase that catalyzes the hydrolysis of nucleoside and deoxynucleoside triphosphates (NTPs and dNTPs) by substitution at a beta-phosphorus to yield a nucleotide monophosphate (NMP) and inorganic pyrophosphate (PPi). This enzyme requires two divalent cations for activity; one coordinates the phosphoryl groups of the NTP/dNTP substrate, and the other coordinates to the enzyme. It also contains the Nudix motif, a highly conserved 23-residue block (GX5EX7REUXEEXGU, where U = I, L or V), that functions as metal binding and catalytic site. MutT pyrophosphohydrolase is important in preventing errors in DNA replication by hydrolyzing mutagenic nucleotides such as 8-oxo-dGTP (a product of oxidative damage), which can mispair with template adenine during DNA replication, to guanine nucleotides.	3.49626e-33
NZ_AP022561.1\|WP_147292067.1\|4404822_4405431_+\|hypothetical-protein	gnl\|CDD\|223021	PHA03247, PHA03247, large tegument protein UL36; Provisional.	0.00131779
NZ_AP022561.1\|WP_115322054.1\|4405460_4406543_+\|hypothetical-protein	gnl\|CDD\|223021	PHA03247, PHA03247, large tegument protein UL36; Provisional.	3.47419e-06
NZ_AP022561.1\|WP_115321691.1\|4406605_4408006_+\|wax-ester/triacylglycerol-synthase-family-O-acyltransferase	gnl\|CDD\|274360	TIGR02946, Putative_diacyglycerol_O-acyltransferase_Mb3115, acyltransferase, WS/DGAT/MGAT. This bacteria-specific protein family includes a characterized, homodimeric, broad specificity acyltransferase from Acinetobacter sp. strain ADP1, active as wax ester synthase, as acyl coenzyme A:diacylglycerol acyltransferase, and as acyl-CoA:monoacylglycerol acyltransferase. [Unknown function, Enzymes of unknown specificity].	1.09879e-113
NZ_AP022561.1\|WP_115321685.1\|4398140_4399355_-\|cytochrome-P450	gnl\|CDD\|225035	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism].	6.16097e-100
NZ_AP022561.1\|WP_115322053.1\|4388875_4389880_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|183450	PRK12335, PRK12335, tellurite resistance protein TehB; Provisional.	1.61254e-11
NZ_AP022561.1\|WP_036343786.1\|4394185_4396084_-\|translational-GTPase-TypA	gnl\|CDD\|224138	COG1217, TypA, Predicted membrane GTPase involved in stress response [Signal transduction mechanisms].	0
NZ_AP022561.1\|WP_115321681.1\|4392255_4394166_-\|ABC-transporter-family-substrate-binding-protein	gnl\|CDD\|173866	cd08501, PBP2_Lpqw, The substrate-binding domain of mycobacterial lipoprotein Lpqw contains type 2 periplasmic binding fold. LpqW is one of key players in synthesis and transport of the unique components of the mycobacterial cell wall which is a complex structure rich in two related lipoglycans, the phosphatidylinositol mannosides (PIMs) and lipoarabinomannans (LAMs). Lpqw is a highly conserved lipoprotein that transport intermediates from a pathway for mature PIMs production into a pathway for LAMs biosynthesis, thus controlling the relative abundance of these two essential components of cell wall. LpqW is thought to have been adapted by the cell-wall biosynthesis machinery of mycobacteria and other closely related pathogens, evolving to play an important role in PIMs/LAMs biosynthesis. Most of periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the LpqW protein. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	5.06068e-132

>NZ_AP022561.1|WP_115321686.1|4399367_4399754_-|NUDIX-domain-containing-protein
MSQIVVAGALISGATLLVAQRQRPPELAGLWELPGGKVATGESEADALARELREELGVDVVVGERLGADLAIGESMVLRAYVVTQTGGALHPHDHRALRWVSVAELESLDWVPADRAWLPELAKRLGE
>NZ_AP022561.1|WP_115321685.1|4398140_4399355_-|cytochrome-P450
MIWGVLTDVTADVDLTDGRFYASGSAREAYRWMRTHQPVFRDRNGLAAAATYRAVIDAERQPELFSNAGGIRPTTPPLPHMIDMDDPQHLLRRKLVNAGFTRKRVRDRAKSIDALCDTLIDAVCERGSCDFVRDLAAPLPMAVIGDMLGVAPEDRDTLLAWSDDMVVALSSAATEESLLAAATALTAYNEFMAGFVAQRRREPADDLVSVLIAADVDGQRLTDEQIYAETLLILIGGDETTRHTLSGGTAELSRHPEQWHAVSDDPDLLPGAVEEMLRWTSPIKNMCRTLSADTDFHGTALHQGEKILLLFESANFDETVFGDPDTFRIDRTPNNHVSFGFGTHFCLGNQLARLELTAMTRRVLARLPDLRLVDGAELPLRPANFVSGLEAMPVEFAPTAPVSR
>NZ_AP022561.1|WP_115321684.1|4397051_4398131_-|hypothetical-protein
MGVLRFIWQRVLAFDRIGSRIPQLIQIWLLELLFALPLAFFVGKAIDIHGAFGVPGTGESMPGTFWGALVVALVAGFFFVRSLVKPRIVKGSWAPVVHADVGDFTVYAANDQARVDYVYLSSHPSYALLLLLTVPIPGVMVAATTNQGDSTFYWRITGIVGLAILGCMALARILAWYVFRFGRRQLDDQVSGLPVSARRLGWEIAWKPVLMLVVLMYAIVCIPLGWMWIAEKRTIARLPEVTVADARDHVGDYRRVQGTPASPPQYWAPRGTGRGGNNYAGAGILVDLDAGGQALLLAESMSVPDFRGVLQRTDGGRLNATGKVIDQITADQRIYYGFDPGAFGAAPPGGRVMLLLSYP
>NZ_AP022561.1|WP_115321683.1|4396782_4397055_+|hypothetical-protein
MTVYEVLTIALIVVLGTAATAAIYLGLLNWIGAAYVVRCAGCRHLTVSSDRRQPETCPHCRHPVLMHPVHAAHHPRQFADVRVAGDALKY
>NZ_AP022561.1|WP_115321682.1|4396080_4396707_-|hypothetical-protein
MPCVGTLATLSRQCWLFAVGSACFAAATVPGFSAVAGAGAANWLCFVGSWFFTAAAWMQLVLATPPWKLEWLSAAIQFVGTVLFNISTGAAVWAHATGVRRHYVWTPDALGSVAFLVSAALGVAAATIAVGLIALGSRDWQAEWINMIGSIAFGVSAVGAFVRRTGITEDALVANLGTFFGALCFLAAALLVLPRFRERAPALRESGP
>NZ_AP022561.1|WP_036343786.1|4394185_4396084_-|translational-GTPase-TypA
MNNRDFRNVAIVAHVDHGKTTLVDAMLRQSGALTHRGDDTIERLMDSGDLEKEKGITILAKNTAVHRHNPDGSMTVINVIDTPGHADFGGEVERGLSMVDGVLLLVDASEGPLPQTRFVLRKALAAHLPVILVVNKTDRPDARIAEVVEESHDLLLDVASDLDEEAQAAAEKALDLPTLYASGRAGIASTTQPANGENPDGENLDPLFDVLLEHIPPPQGDPEAPLQALVTNLDASAFLGRLALIRIYKGRLKKGQQVAWMREVDGHPVITNAKITELLVTEGVERTPTEEAVAGDIVAVAGIPEIMIGDTLADPDHAHALPRITVDEPAISVTIGTNTSPLAGKVSGHKLTARMVKSRLDSELVGNVSIKVVDVGRPDAWEVQGRGELALAVLVEQMRREGFELTVGKPQVVTRTIDGKLHEPFEAMTIDCPEEFVGAITQLMAGRKGRMEEMANHAAGWVRMDFIVPSRGLIGFRTDFLTLTRGTGIANAVFDGYRPWAGEIRARHTGSLVSDRSGQITPFAMIQLADRGQFFVEPGQETYEGQVVGINPRAEDLDINITREKKLTNMRSSTADVMETLARPLELGLEQAMEFCAEDECVEVTPEIVRVRKVELDATSRARAKSRAKARG
>NZ_AP022561.1|WP_115321681.1|4392255_4394166_-|ABC-transporter-family-substrate-binding-protein
MRGVPRRPCSLRALAVLLSVLVTAACTVSPPPAPQSTETTESPAPLPPKATQIIMGIDSIGAGFNPHLLSDQSPVNAAISALVLPSSFRPVPDPATSTGSRWEMDPTLLVSAEVTNQNPFTVTYKIRPEASWTDNAPIAADDFWYLWRQMVSQPGVVDPAGYDLITGVQSIEGGKTAVVTFAQPYPAWRELFNDLLPAHIVKDVPGGFPAGLARAMPVTAGQFRVDNIDPQRDEILLARNDRFWGPPAHPDQILFRRAGAPAALADSIRNGDTQVAQVHGGAAAFAQLSAIPDVRTARIVTPRVMQLTLRAREAKLSDPAVRKAILGLLDVDLLAAVGAGSDNTVTLAQAQVRSPSDPGYVPTAPPALGTQRSLELLEQAGFQIDRTPTESPVPSPPSAGSRTETPQPGPPEITRGRVSKDGEILSLVIGVATNDPTSVAVANTAADQLRSVGIAATVLALDPPVLYGDALVNNRVDAIVGWHAAGGDLATSLASRYGCPALEATPVPTAAPTSTTASPSPTPSASPPPVTTPVTPTSPPPPTPESGALVQAPSNLTGICDRSIQPNIAAALDGSAKIDDVINLVEPRLWNLSTVLPILQDTTIVAVGPSVQNVSLSGAVPVGIVGDAGRWAKAAQ
>NZ_AP022561.1|WP_115321680.1|4391291_4392236_+|hypothetical-protein
MPATVTSLYKTSIALAGAGIIAVSPLTPSQSTPITSVHLPQIQLTDLSIPAFGAIPYQIGINLLGDILAATPILIGSTQQCDTYCLGPNTPAPLPTYAPFTGWGLVGLGKGLISSPAAFIGALQAGRDVPQALGVALLALQVPITNTFSLLTASRMPFGGFGLQATLERTFTASQDALVAGYQIAAQALVQGPLTVLGGAVAGATAFASTLAQTGDIVTALTAGRAPIQQAVTAAANDLAFKIDTGRARVYADLLAGPGATTRPIPTVPAPSGAASRLTKSTNTKTTAAGGATSTAKKGGVAGSKRAHKAASAR
>NZ_AP022561.1|WP_147292066.1|4390197_4391163_+|hypothetical-protein
MQISTTQLSTSPDLLSPSDKSLLSALTPKLPSSDIGPALAQILAALAADADRISREVSSAINPEPSVVAALPEQTAYRPEPIGSGFVESANATPVPSTTGFVTSVVSSDVVQALNGLVLDTSYLGGKVVEAAYAVVAVIIRVPQFVVTAALDLLAGDIAGALDTVKAAIRAFWGPGLIILDGIRDVLYGRRPPAIPPPAALKNLVASATAGAGTEAKPVTSEPATDTATPEPSGQNNKAGSARKPDTTPTAASLRPTTTTSPATKSTDSSDSGTGTTTPTKGRGDSKPATGTTRSTAGSARDSKTSSSSSSGSSGAGSSTD
>NZ_AP022561.1|WP_115322053.1|4388875_4389880_+|class-I-SAM-dependent-methyltransferase
MTRRLLRRSVATGEISLPAVPGLLEAYVTMCANLFAALGSEFTVEQVDELRGILRDQLTEAFGASPRSEIVISYAAPVGTVLNYHVKSRWWTVEGAYENWIATREPPLFGSEPDARVWALAGEAADPRSCPILDLGAGTGRNALALARRGHDVDAVEMTASFAESIREAAQSESLAVRVLQRDIFATMDDLRRDYRLILLSEVVSDFRSTDQLRGIFELASHCLAPGGRLVFNAFVAHRAYTPDDGALQLGQQCYTTIFTQPQMAAALAGSALALVSDVSVYDYEKDHLPAGTWPPTSWYAEWVSGLDVFDVPRDQRPVEMRWLVYEKSSVPPV
>NZ_AP022561.1|WP_115321688.1|4403165_4403453_+|4a-hydroxytetrahydrobiopterin-dehydratase
MAVLTDEEVNSAVTKLDGWEHADGALRRSVKFPTFLDGIDAVRRVAESAERQDHHPDIDIRWRTVTFVLVTHSEGGITDKDVQMASDINGIVGEV
>NZ_AP022561.1|WP_115321689.1|4403427_4404714_-|mannosyltransferase
MRGPVWARSKFGAVTGVQPRLARRSWERSIRRYSRHVDTKARARPAWLAPVLLIVSVAARLGWTYLAPNGANFVDLHVYLGGAGALDHPGTLYSYVYADQTPDFPLPFTYPPFAALVFYPLHLLPFGVVAFCWQLGIIAALYGVVRVSQRLLGTPATDGRAVAMIWTAVAIWLEPLRSNFDYGQINVILVLAVLWSAYSSRWWLSGLLVGLAAGIKLTPAVTGLYFLGMRRWGAAVFSAVVFAGTVGLSVAVIGQQARFYFTDLLGDARRVGPIGTSFNQSWRGAVSRIFGHDAAYGPVVLAAIAVTAVLAVLAWRALDSDRLGCLLVVQLFGLLISPISWTHHWVWLVPLMIWLLHGPWRNRLGAKVLGYGWLALTVIGVPWLLSFAQPTIWQIGRPWYLAWAGLIYAVAALATLAWIAATPRRQSR
>NZ_AP022561.1|WP_147292067.1|4404822_4405431_+|hypothetical-protein
MTMSRRSKLFAANIIGAAGLCSVALALSPSAGADPGVSPAVPGVPALNMLQQFVTNPASAAAILQSAATALGGASALTGAPSTLPVSPIVGAPATATLPGMPAPAAPAAAPAAPAPGGITGAVAPLLNQLGVPGDLGSLTPTDMPFPVKVGDSLSVGNPAPIAPVATGVAGPAGVPPASGPVAPTTPGGAGLGQLLPLSALP
>NZ_AP022561.1|WP_115322054.1|4405460_4406543_+|hypothetical-protein
MPQIAKMAIGLTTAAFVAATNLAFSPVAAADPAIPLDPGQLPGLDAMQMLGPVVQQAAGNPSSAQSLLLAAASQLAGGATTPGGSAALAQQVTKFVQEGGAAGPSAALPAAAPPAAPQALGVAHGTTPLLTPGTGNGPVPLPEHLPDGAAPSSIFGTEAHLPVGIDPAHAVGPAPEALPEVPTPVTVVNPAAPPTPSATPAGNSINVATPAPAPAAATPPNYDPASPPTQDFMYPSISNGCLKDGGNVIATAISVAGPAKIPTPGPAAGQTAYVFTAVGTPAPAAEQKLPLNVTWVNLTTGKSGGVTLKPNPDINSAGPTTLTAIADTGSGSIMSTIFGQVTTVDKQCTFMPTIGSTVVP
>NZ_AP022561.1|WP_115321691.1|4406605_4408006_+|wax-ester/triacylglycerol-synthase-family-O-acyltransferase
METLDPLDAMMLTAELISSPMHVAVALIMTPPTGTSSTTFVDELYEQALTASDPVDPRLRRRPYRGVDTGGLWVWREVDELDMRHHVHRLTLPPDAGTTELWDLVSELHAEPLDRSAPMWMAYLIDGLEGGRLALYIKIHHIVIDGVAGLKMIADSLSEDPDRRDMPPFYADATPPEPPRHRGLNPLSMVRDAAGVAASGLNLARNVASAEVTNLVGGLITPTIAAPFGAPHTRFNTKLSHQRAFAATSLDHNRIRAIQHAADVTGNDVAMALVAGVLREWLTAQDELPEQSLVALCPVTVRDRDATAADNGHGNQFGLGLCPLATNRDDPAQRLRLVHEAMAGVKYQVAARGPGAMLMVLMPAVVPTALAPLLPFSSWVRPSYNLPISNVPGPPRQSYLNGASVDEIYPVSVVYDGMALNVTLCSYADQIGVGYIADREVMADVRDLIPLTETALAELEAAVGVV
>NZ_AP022561.1|WP_005147085.1|4408079_4408226_-|hypothetical-protein
MKTHINCPCGEAISAKDEDELVDLTKQHLAAAHPGMDYGRDEILFMAY
>NZ_AP022561.1|WP_163789364.1|4409054_4409225_-|hypothetical-protein
MKIGDLIRQLSTLRAQHKTDFEVMRWNSCCCYGDDEVDIENVELQPNDGHPYVVLS
>NZ_AP022561.1|WP_163789366.1|4409221_4409419_-|hypothetical-protein
MQQMVFLTLTPPDGEGKLYIEHREITSVYELPDGSTEVAGYLVKESFEQIFEKLTEAYKLVEGVE
>NZ_AP022561.1|WP_115321693.1|4409435_4409705_-|hypothetical-protein
MWESHDPFIDGSIPAPRKPILAVYDDYTVELSGQRFALATPPQLDAYSRYPDERQKVRVSFDCYEILPVLAAKPKRRRASEALGLRRPK
>NZ_AP022561.1|WP_115321694.1|4409704_4409920_-|hypothetical-protein
MKKAKLKAELTSWRLDSTFDSNRLTVEVDLPPTGMRWGWESGADLARMITDYAHYRSKPYWRRVWDALRGL

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1718616 : 1726718

Bacillus_phage(33.33%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_115319182.1\|1718616_1719486_+	SDR family oxidoreductase	W8CYX9	Bacillus_phage	2.2e-06	34.4
WP_115319183.1\|1719487_1721050_-	alkaline phosphatase	NA	NA	NA	NA
WP_115319184.1\|1721109_1722165_-	DNA polymerase IV	A0A218MNF2	uncultured_virus	4.1e-18	29.7
WP_115319185.1\|1722152_1722755_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_115319186.1\|1722842_1723385_+	NAD(P)H-dependent oxidoreductase	A0A2P0ZL77	Lactobacillus_phage	1.0e-09	36.5
WP_083116660.1\|1723832_1724072_+	redoxin NrdH	V5UN81	Mycobacterium_phage	1.7e-20	62.7
WP_115319187.1\|1724100_1724583_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	A0A217ER62	Bacillus_phage	1.9e-07	29.5
WP_115319188.1\|1724549_1726718_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	V9VI16	Lactococcus_phage	3.7e-207	51.0

DBSCAN-SWA_2

4409054 : 4461954

Mycobacterium_phage(87.5%)

capsid,portal,head,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_163789364.1\|4409054_4409225_-	hypothetical protein	A0A249XT83	Mycobacterium_phage	2.3e-08	50.9
WP_163789366.1\|4409221_4409419_-	hypothetical protein	A0A249XTR4	Mycobacterium_phage	4.1e-09	49.2
WP_115321693.1\|4409435_4409705_-	hypothetical protein	NA	NA	NA	NA
WP_115321694.1\|4409704_4409920_-	hypothetical protein	NA	NA	NA	NA
WP_115321695.1\|4410308_4410602_-	hypothetical protein	G1JV91	Mycobacterium_phage	1.4e-13	44.8
WP_115321696.1\|4410628_4410883_-	hypothetical protein	G8I687	Mycobacterium_phage	8.5e-15	44.0
WP_115321697.1\|4410879_4411161_-	hypothetical protein	A0A2H4PD68	Mycobacterium_phage	5.2e-21	58.9
WP_115321698.1\|4411157_4411745_-	DUF2493 domain-containing protein	A0A0S2MVA4	Mycobacterium_phage	1.8e-31	57.3
WP_115321699.1\|4411741_4413577_-	DNA polymerase	B3VGJ2	Mycobacterium_virus	1.1e-284	80.5
WP_115321700.1\|4413584_4413827_-	hypothetical protein	A0A2H4PD73	Mycobacterium_phage	6.4e-12	66.7
WP_115321701.1\|4413823_4414021_-	hypothetical protein	NA	NA	NA	NA
WP_163789368.1\|4414017_4414179_-	hypothetical protein	NA	NA	NA	NA
WP_115321702.1\|4414178_4414409_-	hypothetical protein	A0A2K9VI35	Mycobacterium_phage	1.0e-06	49.2
WP_115321703.1\|4414408_4414858_-	hypothetical protein	I1V1H7	Mycobacterium_phage	4.8e-37	56.4
WP_115321704.1\|4414857_4415061_-	hypothetical protein	A0A1X9SF70	Mycobacterium_phage	1.5e-14	64.9
WP_115321705.1\|4415070_4415799_-	FAD-dependent thymidylate synthase	A0A076YKL7	Mycobacterium_phage	1.3e-111	82.1
WP_115322055.1\|4415872_4416298_-	hypothetical protein	A0A2P1A2T2	Mycobacterium_phage	3.3e-43	74.5
WP_115321706.1\|4416459_4418508_-	ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent	D3JZB5	Mycobacterium_phage	0.0e+00	83.1
WP_115321707.1\|4418504_4418687_-	hypothetical protein	I1V1I3	Mycobacterium_phage	2.5e-24	81.4
WP_115321708.1\|4418683_4419328_-	hypothetical protein	A0A1B3B0W9	Gordonia_phage	1.9e-39	44.1
WP_115321709.1\|4419501_4420269_-	metallophosphoesterase	A0A1J0GVH3	Mycobacterium_phage	2.4e-137	89.0
WP_115321710.1\|4420818_4421091_-	glutaredoxin family protein	A0A1X9SF80	Mycobacterium_phage	1.1e-33	74.4
WP_115321711.1\|4421090_4421549_-	toprim domain-containing protein	A0A1J0GQ23	Mycobacterium_phage	7.3e-73	86.8
WP_115321712.1\|4421550_4421934_-	hypothetical protein	A0A1D8EYA8	Mycobacterium_phage	1.6e-52	78.0
WP_115321713.1\|4421930_4422398_-	hypothetical protein	S5VWN0	Mycobacterium_phage	3.2e-76	89.9
WP_115322056.1\|4422398_4423238_-	alpha/beta fold hydrolase	B3VGL1	Mycobacterium_virus	1.0e-104	67.5
WP_163789371.1\|4423219_4423396_-	hypothetical protein	NA	NA	NA	NA
WP_170310640.1\|4423392_4423614_-	hypothetical protein	R4JF50	Mycobacterium_phage	5.0e-19	63.9
WP_115321715.1\|4423739_4424126_-	hypothetical protein	A0A142K5G3	Mycobacterium_phage	2.6e-55	85.9
WP_115321716.1\|4424152_4424950_-	AAA family ATPase	A0A127KQ29	Mycobacterium_phage	5.4e-132	86.4
WP_163789373.1\|4425028_4425175_-	hypothetical protein	A0A2R4AP80	Mycobacterium_phage	1.2e-05	45.8
WP_115321717.1\|4425171_4425414_-	hypothetical protein	W8EAM4	Mycobacterium_phage	6.9e-22	66.7
WP_115321718.1\|4425442_4425637_-	hypothetical protein	A0A1D8EZU5	Mycobacterium_phage	3.7e-26	89.1
WP_115322057.1\|4425633_4425873_-	hypothetical protein	A0A1J0GNY4	Mycobacterium_phage	3.6e-23	72.3
WP_115321719.1\|4426007_4426967_-	PD-(D/E)XK nuclease family protein	S5ZA05	Mycobacterium_phage	2.0e-144	76.1
WP_163789375.1\|4426963_4427251_-	hypothetical protein	G1D1S3	Mycobacterium_virus	8.4e-11	54.0
WP_170310641.1\|4427406_4427943_-	Repressor-like immunity protein	B3VGM1	Mycobacterium_virus	9.7e-69	69.3
WP_115321721.1\|4428176_4428359_-	hypothetical protein	A0A286MQ89	Mycobacterium_phage	6.3e-12	69.4
WP_163789377.1\|4428360_4428537_-	hypothetical protein	NA	NA	NA	NA
WP_115321722.1\|4428533_4428854_-	hypothetical protein	A0A1D8EY82	Mycobacterium_phage	1.5e-16	47.1
WP_115321723.1\|4428980_4429316_-	hypothetical protein	A0A1D8EVD9	Mycobacterium_phage	7.3e-22	59.8
WP_115321724.1\|4429312_4429783_-	hypothetical protein	A0A2D1G8M2	Mycobacterium_phage	2.4e-63	72.3
WP_115321725.1\|4429856_4430531_-	DNA cytosine methyltransferase	A0A127KPY8	Mycobacterium_phage	2.4e-117	89.8
WP_115321726.1\|4430695_4430896_-	hypothetical protein	A0A1L5C0M5	Mycobacterium_phage	1.5e-19	76.1
WP_115321727.1\|4430892_4431108_-	GAF domain-containing protein	A0A0F6WDN9	Mycobacterium_phage	1.1e-07	47.1
WP_115321728.1\|4431107_4431356_-	hypothetical protein	A0A1B3B168	Gordonia_phage	6.8e-25	73.0
WP_115321729.1\|4431469_4431823_-	hypothetical protein	I1V1L8	Mycobacterium_phage	1.0e-34	67.3
WP_115322059.1\|4431836_4432022_-	hypothetical protein	A0A1J0GQ42	Mycobacterium_phage	1.0e-17	71.9
WP_115321730.1\|4432161_4432755_-	hypothetical protein	A0A0B5A0Y9	Mycobacterium_phage	3.8e-82	79.0
WP_115321731.1\|4432775_4432985_-	hypothetical protein	NA	NA	NA	NA
WP_115321732.1\|4433091_4433349_-	hypothetical protein	G1BMN6	Mycobacterium_virus	1.1e-20	64.7
WP_115321733.1\|4434844_4435141_+	HNH endonuclease	A0A1J0GQ55	Mycobacterium_phage	1.3e-38	78.6
WP_115321734.1\|4435180_4435672_+	hypothetical protein	A0A1D8EV49	Mycobacterium_phage	7.6e-60	73.5
WP_115321735.1\|4435761_4437126_+	hypothetical protein	A0A0N7E4G1	Mycobacterium_phage	1.2e-179	66.4
WP_147292068.1\|4437122_4438508_+	collagen-like protein	A0A1I9S3V4	Mycobacterium_phage	2.5e-15	74.1
WP_170310605.1\|4438758_4438917_+	hypothetical protein	A0A2D1GK71	Mycobacterium_phage	7.4e-17	82.7
WP_115321738.1\|4438916_4440320_+	M15 family metallopeptidase	A0A1I9S3V7	Mycobacterium_phage	3.2e-188	69.3
WP_115321739.1\|4440316_4440724_+	hypothetical protein	A0A1D8EV73	Mycobacterium_phage	5.4e-27	50.7
WP_115321740.1\|4440741_4442505_+	hypothetical protein	A0A2P1N2A7	Mycobacterium_phage	1.8e-297	81.8
WP_115321741.1\|4442501_4443983_+\|portal	phage portal protein	W0LNT1	Mycobacterium_phage	1.1e-231	80.3
WP_115321742.1\|4443979_4444840_+	hypothetical protein	A0A2D1GK43	Mycobacterium_phage	4.5e-124	79.6
WP_115321743.1\|4444889_4445399_+\|head	head assembly protein	S5YEJ4	Mycobacterium_phage	1.6e-49	69.4
WP_115321744.1\|4445445_4446429_+\|capsid	phage major capsid protein	A0A1D8EY28	Mycobacterium_phage	1.9e-134	80.8
WP_115321745.1\|4446506_4446884_+	hypothetical protein	A0A2D1G992	Mycobacterium_phage	2.4e-50	82.4
WP_115321747.1\|4447077_4447446_+	hypothetical protein	A0A249XTX8	Mycobacterium_phage	4.5e-57	86.9
WP_115321748.1\|4447445_4447781_+	hypothetical protein	A0A2H4PD84	Mycobacterium_phage	7.5e-51	88.3
WP_115321749.1\|4447789_4448224_+	hypothetical protein	A0A2D1G581	Mycobacterium_phage	7.9e-61	81.6
WP_115321750.1\|4448239_4448830_+\|tail	phage tail protein	W8EHI5	Mycobacterium_phage	8.4e-98	88.7
WP_115321751.1\|4448940_4449345_+\|tail	phage tail assembly protein	S5VWJ8	Mycobacterium_phage	2.0e-34	70.7
WP_115321753.1\|4449753_4452177_+	hypothetical protein	A0A0F6SJI2	Mycobacterium_phage	5.1e-56	46.9
WP_115321754.1\|4452203_4453229_+\|tail	phage tail protein	A0A0Y0DB36	Mycobacterium_phage	1.9e-185	86.8
WP_115322060.1\|4453225_4455016_+\|tail	phage tail protein	A0A2H4PD42	Mycobacterium_phage	4.7e-309	83.2
WP_115321755.1\|4455032_4455482_+	DUF2744 domain-containing protein	W0LJ50	Mycobacterium_phage	1.7e-66	80.1
WP_115321756.1\|4455478_4455904_+	hypothetical protein	S5VWK6	Mycobacterium_phage	7.3e-51	71.6
WP_115321757.1\|4455893_4456325_+	hypothetical protein	A0A142K5D5	Mycobacterium_phage	2.7e-61	79.2
WP_115321758.1\|4456334_4458356_+	hypothetical protein	G8IRB1	Mycobacterium_virus	6.9e-107	39.3
WP_115321759.1\|4458391_4458706_-	DUF2510 domain-containing protein	A0A222YZB6	Mycobacterium_phage	1.4e-14	43.9
WP_115321760.1\|4458734_4460276_-	recombinase family protein	A0A222YXW7	Mycobacterium_phage	7.4e-178	62.9
WP_115322061.1\|4460462_4460759_+	DUF732 domain-containing protein	NA	NA	NA	NA
WP_115321761.1\|4460772_4461954_+	histidine kinase	Q9EYF3	Enterobacteria_phage	6.8e-30	32.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_AP022561

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection