CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP048403	Pasteurella multocida strain HS_Canada1 plasmid unnamed, complete sequence	0 crisprs	NA	0	0	0	0
NZ_CP048402	Pasteurella multocida strain HS_Canada1 chromosome, complete genome	4 crisprs	cas1,cas2,DEDDh,cas3,cas8f,cas5f,cas7f,cas6f,cas3-cas2,DinG,csa3	1	39	1	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP048402_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048402_1

30658-31815

TypeII

Consensus_repeat	Method
ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC	PILER-CR
ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC	CRISPRCasFinder
ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC	CRT

17 spacers

cas2,cas1,cas9

The CRISPR arrays of NZ_CP048402_1

>merge|NZ_CP048402|1|30658-31815|PILER-CR,CRISPRCasFinder,CRT
ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAACCTCGCGCTCAAAATCTTGTGTGACTAAAGTATTGTAGCACTGCGAAATGAGAGAGGGAACTACAACCAATTGCACTTGAACCTATTGATGTCACTGATTGTAGCACTGCGAAATGAGAGAGGGAACTACAACAACCGCAGCGATAAAGTTATTTGTTAAGTAATTGTAGCACTGCGAAATGAGAGAGGGAACTACAACAGAAAAGTCCTGACATCTGGGCAATGATATATTGTAGCACTGCGAAATGAGAGAGGGAACTACAACTAATTTATAAGTCATATATGAACTCCATATATTGTAGCACTGCGAAATGAGAGAGGGAACTACAACCAATAGTTCTTGCAATCATTTCAACAATATATTGTAGCACTGCGAAATGAGAGAGGGAACTACAACGCGAAGACACTATTTGTGTAGTACACCCTAATTGTAGCACTGCGAAATGAGAGAGGGAACTACAACAGGACGTATTGAATATTTATCGTTATCAGAATTGTAGCACTGCGAAATGAGAGAGGGAACTACAACTCGTTACTGGATACAGCTACAAAGCCCATTATTGTAGCACTGCGAAATGAGAGAGGGAACTACAACTCAACGGCGAGTGTTGGCTCAAGACGTAGCATTGTAGCACTGCGAAATGAGAGAGGGAACTACAACGTTGACATCGCGCCAAGATTAACGATATGCATTGTAGCACTGCGAAATGAGAGAGGGAACTACAACAGTGTTCATTAACTTTGTAACCAACTTCGCATTGTAGCACTGCGAAATGAGAGAGGGAACTACAACTGGGGAATTAGTGATTTTTCAAAGCTAGAAATTGTAGCACTGCGAAATGAGAGAGGGAACTACAACACACGGAGATCTCCACCAAAATTCGTTATTATTGTAGCACTGCGAAATGAGAGAGGGAACTACAACTACCGTAGCGTTAGAATACTCTGCGTATTCATTGTAGCACTGCGAAATGAGAGAGGGAACTACAACAAGTCCAAACAAGAGATTCTGCGATTAAGTATTGTAGCACTGCGAAATGAGAGAGGGAACTACAACCCGCCACGAGATTCGAACTCGCTATCTTCCATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC

>NZ_CP048402|1|1|30658-31815|PILER-CR
ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC	CTCGCGCTCAAAATCTTGTGTGACTAAAGT
ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC	CAATTGCACTTGAACCTATTGATGTCACTG
ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC	AACCGCAGCGATAAAGTTATTTGTTAAGTA
ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC	AGAAAAGTCCTGACATCTGGGCAATGATAT
ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC	TAATTTATAAGTCATATATGAACTCCATAT
ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC	CAATAGTTCTTGCAATCATTTCAACAATAT
ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC	GCGAAGACACTATTTGTGTAGTACACCCTA
ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC	AGGACGTATTGAATATTTATCGTTATCAGA
ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC	TCGTTACTGGATACAGCTACAAAGCCCATT
ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC	TCAACGGCGAGTGTTGGCTCAAGACGTAGC
ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC	GTTGACATCGCGCCAAGATTAACGATATGC
ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC	AGTGTTCATTAACTTTGTAACCAACTTCGC
ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC	TGGGGAATTAGTGATTTTTCAAAGCTAGAA
ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC	ACACGGAGATCTCCACCAAAATTCGTTATT
ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC	TACCGTAGCGTTAGAATACTCTGCGTATTC
ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC	AAGTCCAAACAAGAGATTCTGCGATTAAGT
ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC	CCGCCACGAGATTCGAACTCGCTATCTTCC
ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC

>NZ_CP048402|1|1|30658-31815|CRISPRCasFinder
ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC	CTCGCGCTCAAAATCTTGTGTGACTAAAGT
ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC	CAATTGCACTTGAACCTATTGATGTCACTG
ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC	AACCGCAGCGATAAAGTTATTTGTTAAGTA
ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC	AGAAAAGTCCTGACATCTGGGCAATGATAT
ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC	TAATTTATAAGTCATATATGAACTCCATAT
ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC	CAATAGTTCTTGCAATCATTTCAACAATAT
ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC	GCGAAGACACTATTTGTGTAGTACACCCTA
ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC	AGGACGTATTGAATATTTATCGTTATCAGA
ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC	TCGTTACTGGATACAGCTACAAAGCCCATT
ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC	TCAACGGCGAGTGTTGGCTCAAGACGTAGC
ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC	GTTGACATCGCGCCAAGATTAACGATATGC
ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC	AGTGTTCATTAACTTTGTAACCAACTTCGC
ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC	TGGGGAATTAGTGATTTTTCAAAGCTAGAA
ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC	ACACGGAGATCTCCACCAAAATTCGTTATT
ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC	TACCGTAGCGTTAGAATACTCTGCGTATTC
ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC	AAGTCCAAACAAGAGATTCTGCGATTAAGT
ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC	CCGCCACGAGATTCGAACTCGCTATCTTCC
ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC

>NZ_CP048402|1|1|30658-31815|CRT
ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC	CTCGCGCTCAAAATCTTGTGTGACTAAAGT
ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC	CAATTGCACTTGAACCTATTGATGTCACTG
ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC	AACCGCAGCGATAAAGTTATTTGTTAAGTA
ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC	AGAAAAGTCCTGACATCTGGGCAATGATAT
ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC	TAATTTATAAGTCATATATGAACTCCATAT
ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC	CAATAGTTCTTGCAATCATTTCAACAATAT
ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC	GCGAAGACACTATTTGTGTAGTACACCCTA
ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC	AGGACGTATTGAATATTTATCGTTATCAGA
ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC	TCGTTACTGGATACAGCTACAAAGCCCATT
ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC	TCAACGGCGAGTGTTGGCTCAAGACGTAGC
ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC	GTTGACATCGCGCCAAGATTAACGATATGC
ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC	AGTGTTCATTAACTTTGTAACCAACTTCGC
ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC	TGGGGAATTAGTGATTTTTCAAAGCTAGAA
ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC	ACACGGAGATCTCCACCAAAATTCGTTATT
ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC	TACCGTAGCGTTAGAATACTCTGCGTATTC
ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC	AAGTCCAAACAAGAGATTCTGCGATTAAGT
ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC	CCGCCACGAGATTCGAACTCGCTATCTTCC
ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048402.1\|WP_163883770.1\|25160_25442_+\|alternative-ribosome-rescue-factor-A	unknown	unknown	gnl\|CDD\|225578
NZ_CP048402.1\|WP_005757254.1\|23593_24658_-\|AI-2E-family-transporter	unknown	unknown	gnl\|CDD\|223701
NZ_CP048402.1\|WP_005717494.1\|24737_25088_+\|arsenate-reductase-(glutaredoxin)	unknown	unknown	gnl\|CDD\|272855
NZ_CP048402.1\|WP_163883772.1\|29190_30105_+\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|187851
NZ_CP048402.1\|WP_005754630.1\|34945_35719_-\|acetylglutamate-kinase	unknown	unknown	gnl\|CDD\|239782
NZ_CP048402.1\|WP_005751839.1\|25446_25740_+\|DUF5377-domain-containing-protein	unknown	unknown	gnl\|CDD\|375144
NZ_CP048402.1\|WP_163883771.1\|25964_29135_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226044
NZ_CP048402.1\|WP_163883776.1\|35719_36727_-\|N-acetyl-gamma-glutamyl-phosphate-reductase	unknown	unknown	gnl\|CDD\|234761
NZ_CP048402.1\|WP_005733757.1\|30097_30424_+\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
NZ_CP048402.1\|WP_064972958.1\|19983_20427_+\|GAF-domain-containing-protein	unknown	unknown	gnl\|CDD\|224867
NZ_CP048402.1\|WP_163883774.1\|32383_33079_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048402.1\|WP_163883775.1\|33203_33428_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048402.1\|WP_163883777.1\|36834_37983_+\|acetylornithine-deacetylase	unknown	unknown	gnl\|CDD\|235346
NZ_CP048402.1\|WP_005723319.1\|41500_43645_+\|polyribonucleotide-nucleotidyltransferase	unknown	unknown	gnl\|CDD\|236995
NZ_CP048402.1\|WP_064969094.1\|33556_34930_-\|argininosuccinate-lyase	unknown	unknown	gnl\|CDD\|179883
NZ_CP048402.1\|WP_163883778.1\|39609_41052_+\|glutamate--tRNA-ligase	unknown	unknown	gnl\|CDD\|234953
NZ_CP048402.1\|WP_163883773.1\|31841_32249_+\|phage-tail-protein	unknown	unknown	gnl\|CDD\|377570
NZ_CP048402.1\|WP_005751844.1\|18744_19956_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|273776
NZ_CP048402.1\|WP_163883769.1\|20436_23535_+\|efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223911
NZ_CP048402.1\|WP_005723324.1\|38068_38857_-\|glycosyl-transferase	unknown	unknown	gnl\|CDD\|226297

Protein	Function_ID	Function_description	E-value
NZ_CP048402.1\|WP_163883770.1\|25160_25442_+\|alternative-ribosome-rescue-factor-A	gnl\|CDD\|225578	COG3036, COG3036, Uncharacterized protein conserved in bacteria [Function unknown].	3.0018e-25
NZ_CP048402.1\|WP_005757254.1\|23593_24658_-\|AI-2E-family-transporter	gnl\|CDD\|223701	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only].	3.04594e-56
NZ_CP048402.1\|WP_005717494.1\|24737_25088_+\|arsenate-reductase-(glutaredoxin)	gnl\|CDD\|272855	TIGR00014, Putative_arsenate_reductase., arsenate reductase (glutaredoxin). This model describes a distinct clade, including ArsC itself, of the broader ArsC family described by Pfam pfam03960. This clade is almost completely restricted to the Proteobacteria. An anion-translocating ATPase has been identified as the product of the arsenical resistance operon of resistance plasmid R773. When expressed in Escherichia coli this ATP-driven oxyanion pump catalyses extrusion of the oxyanions arsenite, antimonite and arsenate. The pump is composed of two polypeptides, the products of the arsA and arsB genes. The pump alone produces resistance to arsenite and antimonite. This protein, ArsC, catalyzes the reduction of arsenate to arsenite, and thus extends resistance to include arsenate. [Cellular processes, Detoxification].	1.56527e-62
NZ_CP048402.1\|WP_163883772.1\|29190_30105_+\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187851	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer intergration. Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	1.20621e-144
NZ_CP048402.1\|WP_005754630.1\|34945_35719_-\|acetylglutamate-kinase	gnl\|CDD\|239782	cd04249, AAK_NAGK-NC, AAK_NAGK-NC: N-Acetyl-L-glutamate kinase - noncyclic (NAGK-NC) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis using the acetylated, noncyclic route of ornithine biosynthesis. There are two variants of this pathway. In one, typified by the pathway in Escherichia coli, glutamate is acetylated by acetyl-CoA and acetylornithine is deacylated hydrolytically. In this pathway, feedback inhibition by arginine occurs at the initial acetylation of glutamate and not at the phosphorylation of NAG by NAGK. Homodimeric NAGK-NC are members of the Amino Acid Kinase Superfamily (AAK).	3.96117e-133
NZ_CP048402.1\|WP_005751839.1\|25446_25740_+\|DUF5377-domain-containing-protein	gnl\|CDD\|375144	pfam17347, DUF5377, Family of unknown function (DUF5377). This is a family of unknown function found in Pasteurellaceae.	5.24439e-64
NZ_CP048402.1\|WP_163883771.1\|25964_29135_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|226044	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms].	0
NZ_CP048402.1\|WP_163883776.1\|35719_36727_-\|N-acetyl-gamma-glutamyl-phosphate-reductase	gnl\|CDD\|234761	PRK00436, argC, N-acetyl-gamma-glutamyl-phosphate reductase; Validated.	1.16984e-176
NZ_CP048402.1\|WP_005733757.1\|30097_30424_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	3.88257e-59
NZ_CP048402.1\|WP_064972958.1\|19983_20427_+\|GAF-domain-containing-protein	gnl\|CDD\|224867	COG1956, COG1956, GAF domain-containing protein [Signal transduction mechanisms].	5.28952e-82
NZ_CP048402.1\|WP_005723319.1\|41500_43645_+\|polyribonucleotide-nucleotidyltransferase	gnl\|CDD\|236995	PRK11824, PRK11824, polynucleotide phosphorylase/polyadenylase; Provisional.	0
NZ_CP048402.1\|WP_163883777.1\|36834_37983_+\|acetylornithine-deacetylase	gnl\|CDD\|235346	PRK05111, PRK05111, acetylornithine deacetylase; Provisional.	0
NZ_CP048402.1\|WP_064969094.1\|33556_34930_-\|argininosuccinate-lyase	gnl\|CDD\|179883	PRK04833, PRK04833, argininosuccinate lyase; Provisional.	0
NZ_CP048402.1\|WP_163883778.1\|39609_41052_+\|glutamate--tRNA-ligase	gnl\|CDD\|234953	PRK01406, gltX, glutamyl-tRNA synthetase; Reviewed.	0
NZ_CP048402.1\|WP_163883773.1\|31841_32249_+\|phage-tail-protein	gnl\|CDD\|377570	pfam05939, Phage_min_tail, Phage minor tail protein. This family consists of a series of phage minor tail proteins and related sequences from several bacterial species.	3.59045e-37
NZ_CP048402.1\|WP_005751844.1\|18744_19956_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	9.71127e-64
NZ_CP048402.1\|WP_163883769.1\|20436_23535_+\|efflux-RND-transporter-permease-subunit	gnl\|CDD\|223911	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms].	0
NZ_CP048402.1\|WP_005723324.1\|38068_38857_-\|glycosyl-transferase	gnl\|CDD\|226297	COG3774, OCH1, Mannosyltransferase OCH1 and related enzymes [Cell envelope biogenesis, outer membrane].	1.33624e-84

>NZ_CP048402.1|WP_005733757.1|30097_30424_+|CRISPR-associated-endonuclease-Cas2
MSEGKFMRLIVFFDLPVTTKAKRKAANQFRQFLLKDGYQMLQLSVYARIIRGRDSMQKHNKRLSDHLPEEGSIRCLEVTEKQFAGMKILLGRLRLQEKKVNANQMLLF
>NZ_CP048402.1|WP_163883772.1|29190_30105_+|type-II-CRISPR-associated-endonuclease-Cas1
MSWRSILISQGGKLSLQRKQMLIQQSNNSFTVPLEDIAVIVIESKETLITAPLLSALAQYGVTLLTCDEQFLPCGQWLPFGQYYRQLKTLKLQLETTLPQKKQLWQKIVQQKIRNQGFVLEQVGYVNETKRLNRMANQVKSGDKENVEAQAALIYFQTLFGKTFKRSDENNINAHLNYAYTILRSAIARALVLYGWLPQLGIFHRSEVNPFNLADDFVEPFRPLVDLMVWQLWHTNQLTSGLSPNIKQKLIGLLHHQMSFQEETFSVLAAIDRTVGSFQAALTTPNANLLKLPEILPLKEHQYE
>NZ_CP048402.1|WP_163883771.1|25964_29135_+|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MQTTNLSYILGLDLGIASVGWAVVEINENEDPIGLIDVGVRIFERAEVPKTGESLALSRRLARSTRRLIRRRAHRLLLAKRFLKREGILSTIDLEKGLPNQAWELRVAGLERQLSRIEWSAVLLHLIKHRGYLSQRKNEKQINHKELGVLLSSVDANHQLLQSNDYRTPAELALKKFAKEEGHIRNQRGAYTHTFNRLDLLAELNLLFAQQHQFGNPHCKEHIQQYMTELLMWQKPALSGEAILKMLGKCTHEKNEFKAAKHTYSAERFVWLTKLNNLRILEDGAERALNEEERQLLINHPYEKSKLTYAQVRKLLGLSEQAIFKHLRYSKENAESATFMELKAWHAIRKALENQGLKDTWQDLAKKPDLLDEIGTAFSLYKTDEDIQQYLTNKVPNSVINALLVSLNFDKFIELSLKSLRKILPLMEQGKRYDQACREIYGHHYGEANQKTSQLLPAIPAQEIRNPVVLRTLSQARKVINAIIRQYGSPARVHIETGRELGKSFKERREIQKQQEDNRTKRESAVQKFKELFSDFSSEPKSKDILKFRLYEQQHGKCLYSGKEINIHRLNEKGYVEIDHALPFSRTWDDSFNNKVLVLASENQNKGNQTPYEWLQGKINSERWKNFVALVLGSQCSAAKKQRLLTQVIDDNKFIDRNLNDTRYIARFLSNYIQENLLLVGKNKKNVFTPNGQITALLRSRWGLIKVRENNDRHHALDAIVVACATPSMQQKITRFIRFKEVHPYKIENRYEMVDQESGEIISPHFPEPWAYFRQEVNIRVFDNHPDTVLKEMLPDRPQANHQFVQPLFVSRAPTRKMSGQGHMETIKSAKRLAEGISVLRIPLTQLKPNLLENMVNKEREPALYAGLKARLAEFNQDPAKAFTTPFYKQGGQQVKAIRVEQVQKSGVLVRENNGVADNASIVRTDVFIKNNKFFLVPIYTWQVAKGILPNKAIVAHKNEDEWEEMDEGAKFKFSLFPNDLVELKTKKEYFFGYYIGLDRATGNISLKEHDGEISKGKDGVYRVGVKLALSFEKYQVDELGKNRQICRPQQRQPVR
>NZ_CP048402.1|WP_005751839.1|25446_25740_+|DUF5377-domain-containing-protein
MTVQTEVLFSNNWNVRISDPGEEGAHSHFFETIYITLVAHIDGSNISYEFTRKVEEQVKIHRTFTDLSELFKFLGDYLDPVSMGFLGIKIGNLGVKA
>NZ_CP048402.1|WP_163883770.1|25160_25442_+|alternative-ribosome-rescue-factor-A
MAKKAKQPQSAQPYQHSRGVIRDNAICALLHDPLFRQRIEKKRKGKGSYQRKAKHVGKYFEKPDYKIFDLKDFIIGFFLTIFYNNATHLNSAR
>NZ_CP048402.1|WP_005717494.1|24737_25088_+|arsenate-reductase-(glutaredoxin)
MCVTIYHNPRCSKSRETLALLEAKYGQPKIELYLEQQFSASQLQQIAQKLGVTSFREMMRTKDELYRDLGLDKPEVSEQQLLEALVAHSSLLERPIVIHGDKAKIGRPPESVLEIL
>NZ_CP048402.1|WP_005757254.1|23593_24658_-|AI-2E-family-transporter
MIEMLKNWYNNRFSDPQAMGLFAILLFGFISIYFFSHLIAPLLIAIVLAYLLEWPIRVLTEKLKFPRLLSTAIIFGGFLGLILVIVLVFIPTLWTQTLNLVTDLPHMFNKLNEWLLSLPEHYPELVDYQTIDSVLSTVRSKILGFGESALKFSLTSLLSLVTLGIYAFLVPLMVFFLLKDKTELIASVSRFLPRNRTLASSVWKEMQQQIANYIRGKLFEIIIVTAVTYAIFIFFNLNYSLLLAVAVGLSVLVPYIGAVLVTIPIALVAVAQFGITPTFWYIITAYVISQILDGNLLVPFLFSEAVNLHPLTIIIAVLIFGGLWGFWGVFFAIPLATLVKAVVNAWPSTEQDTR
>NZ_CP048402.1|WP_163883769.1|20436_23535_+|efflux-RND-transporter-permease-subunit
MRFTDIFIRRPVLAVSISLLIIILGLQAIAKLAVREYPKMTTTVINVSTVYPGADASLIQAFITSKLEEAVAQADNIDYLSSKSSPNNSLITIKMKLNTEPNGALADVLAKVNSVRSQLPRGIDDPVITSSTGGTGMMYIQFSSTKLDASQVTDYIERVIKPQFFTVEGVAEVQIFGASDYALRIWLDPAKMAAQNLSAMAVRNALSSNNVQTAAGNDNGFYVTYKNKVETTTKSVEELGNLIISSQGDKLVRLRDIADVELNKSSDSSRAVANGFESVVLAINPTSSANPLVVAENVRPLYEQIKQNLPDSMQAEILYDTTIAINSSIDEVIKTILEATIIVLVVITLFIGSLRAILIPVITIPISLIGVIMLLQAFDFSINLMTLLALILAIGLVVDDAIVVLENVDRHIKLGETPFRAAIIGTREIAVPVISMTIALMAVYSPMALMDGITGSLFKEFALTLAGAVFISGIVALTLSPMMSSKLLKPHTDPSKLEQCIEKMLTTINQGYNYALNLVMASRRCMLAFAAVIFATLPFLFNGLASELTPAEDKGAFMVIGRAPSNVNVDYVQEAMHEYEQILKDTPEVDFSMVISGAMGSNQSFSVVTLKDWKERTRSQAEILAELNKKSVHIPEVALTGFNFPEINTGEQGPPIGFVISTASGYEDLANVAENFLQEMKKSGHFVYTALDLKFDTAQMRIKVDKEKAGTYGVTMQQISATLGSFLSAATIERVDIDGRAYRIIMQVKRGERLSPESLNNYYVTASNGKSVPLSSFLTMTLESQPTSLPRFSQLNSAVISAVPLPTKSTGEAIAWLKMAAKEYLPQGYNYDFTGEARQLVQEGNALAVTFVLAVVIIFLVLAIQFESIRDPLVIMISVPLAVSGALLMLNFLGFFRIPGTSLNIYSQVGLITLVGLITKHGILMCEVAKEEQLQHGKNRIEAITEAAKVRLRPILMTTAAMIAGLIPLLYASGAGAVSRFSIGIVIVSGLAIGTLFTLFVLPVIYSYIATEHKPLPEFDESIKPLTDKSAH
>NZ_CP048402.1|WP_064972958.1|19983_20427_+|GAF-domain-containing-protein
MNYALLLKQLEQILEPETYIISRMANTSAFLYEHMPELNWVGFYLVKDGVLKVGPFQGKVACSDIGFGKGVCGYTWQTGTTTVVDDVHQFAGHIACDSASQSEVVVPIFQGGEMIAELDVDSPRLARFSAEDVAFLENCAALICIKE
>NZ_CP048402.1|WP_005751844.1|18744_19956_+|efflux-RND-transporter-periplasmic-adaptor-subunit
MSVTQANQPKRSHSIAMKIILGVIVLLFAGVIIFNVIKGKMIEKFIAGAGEKIYPVTAMTIQPQQWTPVIETTGIVRPNQGAMLSAQTSGTVQQVLVQSGQHVKKGEVLVVLDSSVELANLKASQAQLLSVKATYQRYLSLYKTKSVSQQELDNAKSAYEALESNIAALKAGIARRQILAPFDGQTGIVKVNVGQYVNPGMEIVRVEDTSSMKIDFALSQTELEHLHVGQKVTATADARSGETFAAKITAIEPAISATTGLIDVQATFEPEDGRKLLSGMFTRLRVALPTKYDQVVVPQVAINYNMYGEIAYILSELSAEERETLVARQDFDREKIDNAYRVKQVTVFTQDRQGIYAQLKGEEIKPGDKIVTGGQQNLSNGSLVLVADKAGVGTMQPAVKNNL
>NZ_CP048402.1|WP_163883773.1|31841_32249_+|phage-tail-protein
MEMKKKPNVNTIRFGDGYEQRIPQGINNNLRVYSVSFSGSEELINEIDKFLNDHGAVKSFLWTPYNSTQQGHFKCEEWGTSHKTGFFTLSAEFKEVIGSKSQQSNEESSSGQCVIPDDPPDLVAILNKKLEQLSD
>NZ_CP048402.1|WP_163883774.1|32383_33079_+|hypothetical-protein
MKKLLKWIFIILFVFPVILGILASKNKNAKEDQGVSDSVENKPKVEQIEDNFESKIVENAYFAMTKKDNPKTHKAWGSEWIKKINALGPLAGELAAKSKSCDKVVDIALSDTKSKPKKKIVFYVDCKNKERFYISEDDIKSQNKVFSVNESFKNIDSEKYYKACLSGIKSRANHPSTVETSIFGRAIGSTPTGGILVRMDFTAKNSFGLEEKFTAACSWDDDKSEINIYNR
>NZ_CP048402.1|WP_163883775.1|33203_33428_+|hypothetical-protein
MTDFAKLHLNVTSSGIDKADRDLAKLQSSAGRAEKHIESLVKTIGRSKSLLAVGLGIQGISTIIQMTDNCSTAK
>NZ_CP048402.1|WP_064969094.1|33556_34930_-|argininosuccinate-lyase
MALWGGRFTQAADKRFKDFNDSLRFDYRLAEQDIEGSIGWSKALVSVGVLTVQEQQQLESALNTLLIEVRSNPQAILQDDAEDIHSWVESKLIDKVGNLGKKLHTGRSRNDQVALDIKMWCKQRVIELQSSLHALQCKLVETAENNQHAVMPGYTHLQRAQPITFAHWCMAYVEMLDRDYSRLTDAYQRMNSCPLGSGALAGTAYAIDREQLALDLGFDVATRNSLDSVSDRDHIVELLSTASLSMAHLSRFAEDMIIFNSGESNFVELSDRVTSGSSLMPQKKNPDACELIRGKAGRVMGALTGMLMTLKGLPLAYNKDMQEDKEGIFDALDTWQDCIDMAALVLDGIQVNVERTKEAALKGYSNATELADYLVAKGVPFRDSHHIVGETVVYAIQQHKALEALSVAEFKQFSDVVEEDVYQILSLQSCLNKRCAKGGVSPLRVAEAIAEAKARLS
>NZ_CP048402.1|WP_005754630.1|34945_35719_-|acetylglutamate-kinase
MKPLVIKLGGVLLDTPAAMENLFTALANYQQNFDRPLVIVHGGGCIVDELMQRLHLPVQKKNGLRVTPSDHIEIITGALAGIANKTLVAQAAKFHLNPVGLCLADGNLTYATQLDPELGHVATVVPKNPALLNNLLGEAFLPIISSIAVDKQGLLMNVNADQAATAIAALIQADLVMLSDVDGVLDANKQRLPELNGAQIEQLIKDNVITDGMVVKVNAALDAAKMLNQGVDIANWKYPEKLTALFAGEIIGTRIKP
>NZ_CP048402.1|WP_163883776.1|35719_36727_-|N-acetyl-gamma-glutamyl-phosphate-reductase
MQKAIIIGASGYTGAELARILIKHPKFELTGLYVSRQSQDANKCMSEIYPQLKHLVDLPLQPLPEQLTQLAQQADLVFLATAHEVSHDLAPIFLQNQCKVFDLSGAFRVNNAVFYRTFYGFEHQHPELLTQAVYGLAEWNAHQIKQTDLVAVAGCYPTVSQLSLKPLIAHNLLDLTQLPVINAVSGVSGAGRKASLTNSFCEVSLNAYGVFNHRHQPEIATHLGTEVIFTPHLGNFKRGILATITAKLKTGVSDEQIRVAYQHAYADKPLVRVYEQGLPSIKAVEFTPYCDIGFATQNGHIIIIGAEDNLLKGAAAQAVQCANIRYGLTETLGLL
>NZ_CP048402.1|WP_163883777.1|36834_37983_+|acetylornithine-deacetylase
MKKIPSFLQMYSALIASPTMSSIDPHFDQSNRTLIELLANWLSSLGFKTEVIPLEGSRDKFNLLATYGEGEGGLLLAGHTDTVPFDEGRWQFDPFKLTEKDGKFYGLGTADMKGFFAFVIDAVSQLDLTRLTKPLRILATADEETTMLGARTFIQHSHIRPDCAIIGEPTSLKPIRAHKGHVGEALRITGKSGHSSDPSKGINAIELMHEATGYLMQMRDELRQKYHHSAFNIPYPTMNFGAISGGDAVNRICACCELHFDIRPLPNLRLTDLNEMLQAKLAPMFEKWRDRISLQALHDPIPGYECAHSAQVVQVVEKLLGEQCETVNYCTEAPFIQQLCPTLVLGPGSIEQAHQPDEFLSAEFIDPTRELLTKLIGQFCTG
>NZ_CP048402.1|WP_005723324.1|38068_38857_-|glycosyl-transferase
MYKPVKNKHLILITNGMTRLLGNIVKTLSYPFHALFPKMRFTIPEFSPAKRQSHKKTKINRVIWQTNYSNKVTLPVYCNYLFNRLLSLSYDYRYVSTEARADYIKTHADERTFNAYSKLTDGAAQADFWRIFTLYHEGGIYMDIDGHLVWCLDSIIDEEDSEVVISRRGRYTNFFLASAKGNPFLKDTLEIIISNIEQKRIEGGVFCLTGPETLIKALENKEVNSRLDKLTCSQGTFTNEYFQYIDKKRGKWIHAKNEDLLK
>NZ_CP048402.1|WP_163883778.1|39609_41052_+|glutamate--tRNA-ligase
MKAEALFDLDPDVKVRTRFAPSPTGYLHVGGARTALYSWLYAKHHQGEFVLRIEDTDLERSTPEATAAILEGMAWLNLAWEHGPYFQTKRFDRYNQVIDQMIEQGLAYRCYCSKERLEDLRNTQEQNKQKPRYDRHCLGDHKHSPEQPHVVRFKNPTEGSVVFEDAVRGRIEISNAELDDLIIRRTDGSPTYNFCVVVDDWDMGITHVVRGEDHINNTPRQINILKALGAPIPTYAHVSMILGDDGQKLSKRHGAVSVMQYRDDGYLPEALLNYLVRLGWGHGDQEIFSVEEMIKLFELESVSKSASAFNTEKLLWLNHHYIRELPAEYVAKHLAWHYQDQGIDTSNGPALEDIVKMLAERCKTLKEMAAASRYFFEDFDSFDEAAVKKHFKAAAIEPLEKIKEKLTALESWDLHSTHQAIEQTAAELELGMGKVGMPLRVAVTGSGQSPSMDVTLVGIGKARTLVRIQKAIDFIKSQNV
>NZ_CP048402.1|WP_005723319.1|41500_43645_+|polyribonucleotide-nucleotidyltransferase
MNPIVKQFKYGQHTVTLETGAIARQATAAVMASMDDTTVFVTVVAKKDVKEGQDFFPLTVNYQERTYAAGRIPGGFFKREGRPSEGETLIARLIDRPIRPLFPEGFYNEIQIVATVVSVNPQICPDLVAMIGASAALSLSGVPFNGPIGAARVGFIDDQFVLNPTMNEQKQSRLDLVVAGTDKAVLMVESEADVLTEEQMLAAVVFGHQQQQVVIDAIKEFTAEAGKPRWDWVAPEPNTALIEKVKAIAEARLGEAYRITEKQARYEQIDAIKADVIAQITAEVAEGEDISEGKIVDIFTALESQIVRSRIIAGEPRIDGRTVDTVRALDICTGVLPRTHGSAIFTRGETQALAVATLGTERDAQIIDELTGERSDHFLFHYNFPPYSVGETGMIGSPKRREIGHGRLAKRGVAAVMPTLAEFPYVVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEDEKFVVLSDILGDEDHLGDMDFKVAGTRTGVTALQMDIKIEGITAEIMQIALNQAKSARLHILGVMEQAIPAPRADISDFAPRIYTMKIDPKKIKDVIGKGGATIRALTEETGTSIDIDDDGTVKIAAVDGNSAKEVMARIEDITAEVEAGAVYKGKVTRLADFGAFVSIVGNKEGLVHISQIAEERVEKVSDYLAVGQEVTVKVVEIDRQGRIRLTMKEVAPKQEHVDSVVADVAAEENA

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Crispr_ID: NZ_CP048402_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048402_2

33409-33497

TypeII

Consensus_repeat	Method
ATTGTAGCACTGCGAAATGAGAG	CRISPRCasFinder

1 spacers

cas2,cas1,cas9

The CRISPR arrays of NZ_CP048402_2

>merge|NZ_CP048402|2|33409-33497|CRISPRCasFinder
ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAACTGCATTTGCTGAAATGTCTTTCTTTCTCTTATTGTAGCACTGCGAAATGAGAG

>NZ_CP048402|2|2|33409-33497|CRISPRCasFinder
ATTGTAGCACTGCGAAATGAGAG	AGGGAACTACAACTGCATTTGCTGAAATGTCTTTCTTTCTCTT
ATTGTAGCACTGCGAAATGAGAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048402.1\|WP_163883770.1\|25160_25442_+\|alternative-ribosome-rescue-factor-A	unknown	unknown	gnl\|CDD\|225578
NZ_CP048402.1\|WP_005754621.1\|44732_46565_+\|DEAD/DEAH-box-helicase	unknown	unknown	gnl\|CDD\|236941
NZ_CP048402.1\|WP_005717494.1\|24737_25088_+\|arsenate-reductase-(glutaredoxin)	unknown	unknown	gnl\|CDD\|272855
NZ_CP048402.1\|WP_163883772.1\|29190_30105_+\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|187851
NZ_CP048402.1\|WP_005751839.1\|25446_25740_+\|DUF5377-domain-containing-protein	unknown	unknown	gnl\|CDD\|375144
NZ_CP048402.1\|WP_163883771.1\|25964_29135_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226044
NZ_CP048402.1\|WP_163883776.1\|35719_36727_-\|N-acetyl-gamma-glutamyl-phosphate-reductase	unknown	unknown	gnl\|CDD\|234761
NZ_CP048402.1\|WP_005733757.1\|30097_30424_+\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
NZ_CP048402.1\|WP_005754630.1\|34945_35719_-\|acetylglutamate-kinase	unknown	unknown	gnl\|CDD\|239782
NZ_CP048402.1\|WP_163883774.1\|32383_33079_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048402.1\|WP_163883779.1\|46664_47513_-\|ModD-protein	unknown	unknown	gnl\|CDD\|180397
NZ_CP048402.1\|WP_163883777.1\|36834_37983_+\|acetylornithine-deacetylase	unknown	unknown	gnl\|CDD\|235346
NZ_CP048402.1\|WP_005723319.1\|41500_43645_+\|polyribonucleotide-nucleotidyltransferase	unknown	unknown	gnl\|CDD\|236995
NZ_CP048402.1\|WP_064969094.1\|33556_34930_-\|argininosuccinate-lyase	unknown	unknown	gnl\|CDD\|179883
NZ_CP048402.1\|WP_163883778.1\|39609_41052_+\|glutamate--tRNA-ligase	unknown	unknown	gnl\|CDD\|234953
NZ_CP048402.1\|WP_163883773.1\|31841_32249_+\|phage-tail-protein	unknown	unknown	gnl\|CDD\|377570
NZ_CP048402.1\|WP_005757254.1\|23593_24658_-\|AI-2E-family-transporter	unknown	unknown	gnl\|CDD\|223701
NZ_CP048402.1\|WP_010907022.1\|43728_44625_+\|lipoprotein-NlpI	unknown	unknown	gnl\|CDD\|227124
NZ_CP048402.1\|WP_163883769.1\|20436_23535_+\|efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223911
NZ_CP048402.1\|WP_005723324.1\|38068_38857_-\|glycosyl-transferase	unknown	unknown	gnl\|CDD\|226297

Protein	Function_ID	Function_description	E-value
NZ_CP048402.1\|WP_163883770.1\|25160_25442_+\|alternative-ribosome-rescue-factor-A	gnl\|CDD\|225578	COG3036, COG3036, Uncharacterized protein conserved in bacteria [Function unknown].	3.0018e-25
NZ_CP048402.1\|WP_005757254.1\|23593_24658_-\|AI-2E-family-transporter	gnl\|CDD\|223701	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only].	3.04594e-56
NZ_CP048402.1\|WP_005717494.1\|24737_25088_+\|arsenate-reductase-(glutaredoxin)	gnl\|CDD\|272855	TIGR00014, Putative_arsenate_reductase., arsenate reductase (glutaredoxin). This model describes a distinct clade, including ArsC itself, of the broader ArsC family described by Pfam pfam03960. This clade is almost completely restricted to the Proteobacteria. An anion-translocating ATPase has been identified as the product of the arsenical resistance operon of resistance plasmid R773. When expressed in Escherichia coli this ATP-driven oxyanion pump catalyses extrusion of the oxyanions arsenite, antimonite and arsenate. The pump is composed of two polypeptides, the products of the arsA and arsB genes. The pump alone produces resistance to arsenite and antimonite. This protein, ArsC, catalyzes the reduction of arsenate to arsenite, and thus extends resistance to include arsenate. [Cellular processes, Detoxification].	1.56527e-62
NZ_CP048402.1\|WP_163883772.1\|29190_30105_+\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187851	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer intergration. Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	1.20621e-144
NZ_CP048402.1\|WP_005751839.1\|25446_25740_+\|DUF5377-domain-containing-protein	gnl\|CDD\|375144	pfam17347, DUF5377, Family of unknown function (DUF5377). This is a family of unknown function found in Pasteurellaceae.	5.24439e-64
NZ_CP048402.1\|WP_163883771.1\|25964_29135_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|226044	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms].	0
NZ_CP048402.1\|WP_163883776.1\|35719_36727_-\|N-acetyl-gamma-glutamyl-phosphate-reductase	gnl\|CDD\|234761	PRK00436, argC, N-acetyl-gamma-glutamyl-phosphate reductase; Validated.	1.16984e-176
NZ_CP048402.1\|WP_005754621.1\|44732_46565_+\|DEAD/DEAH-box-helicase	gnl\|CDD\|236941	PRK11634, PRK11634, ATP-dependent RNA helicase DeaD; Provisional.	0
NZ_CP048402.1\|WP_005733757.1\|30097_30424_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	3.88257e-59
NZ_CP048402.1\|WP_005723319.1\|41500_43645_+\|polyribonucleotide-nucleotidyltransferase	gnl\|CDD\|236995	PRK11824, PRK11824, polynucleotide phosphorylase/polyadenylase; Provisional.	0
NZ_CP048402.1\|WP_163883779.1\|46664_47513_-\|ModD-protein	gnl\|CDD\|180397	PRK06096, PRK06096, molybdenum transport protein ModD; Provisional.	0
NZ_CP048402.1\|WP_163883777.1\|36834_37983_+\|acetylornithine-deacetylase	gnl\|CDD\|235346	PRK05111, PRK05111, acetylornithine deacetylase; Provisional.	0
NZ_CP048402.1\|WP_064969094.1\|33556_34930_-\|argininosuccinate-lyase	gnl\|CDD\|179883	PRK04833, PRK04833, argininosuccinate lyase; Provisional.	0
NZ_CP048402.1\|WP_163883778.1\|39609_41052_+\|glutamate--tRNA-ligase	gnl\|CDD\|234953	PRK01406, gltX, glutamyl-tRNA synthetase; Reviewed.	0
NZ_CP048402.1\|WP_163883773.1\|31841_32249_+\|phage-tail-protein	gnl\|CDD\|377570	pfam05939, Phage_min_tail, Phage minor tail protein. This family consists of a series of phage minor tail proteins and related sequences from several bacterial species.	3.59045e-37
NZ_CP048402.1\|WP_005754630.1\|34945_35719_-\|acetylglutamate-kinase	gnl\|CDD\|239782	cd04249, AAK_NAGK-NC, AAK_NAGK-NC: N-Acetyl-L-glutamate kinase - noncyclic (NAGK-NC) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis using the acetylated, noncyclic route of ornithine biosynthesis. There are two variants of this pathway. In one, typified by the pathway in Escherichia coli, glutamate is acetylated by acetyl-CoA and acetylornithine is deacylated hydrolytically. In this pathway, feedback inhibition by arginine occurs at the initial acetylation of glutamate and not at the phosphorylation of NAG by NAGK. Homodimeric NAGK-NC are members of the Amino Acid Kinase Superfamily (AAK).	3.96117e-133
NZ_CP048402.1\|WP_010907022.1\|43728_44625_+\|lipoprotein-NlpI	gnl\|CDD\|227124	COG4785, NlpI, Lipoprotein NlpI, contains TPR repeats [General function prediction only].	7.757e-159
NZ_CP048402.1\|WP_163883769.1\|20436_23535_+\|efflux-RND-transporter-permease-subunit	gnl\|CDD\|223911	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms].	0
NZ_CP048402.1\|WP_005723324.1\|38068_38857_-\|glycosyl-transferase	gnl\|CDD\|226297	COG3774, OCH1, Mannosyltransferase OCH1 and related enzymes [Cell envelope biogenesis, outer membrane].	1.33624e-84

>NZ_CP048402.1|WP_163883774.1|32383_33079_+|hypothetical-protein
MKKLLKWIFIILFVFPVILGILASKNKNAKEDQGVSDSVENKPKVEQIEDNFESKIVENAYFAMTKKDNPKTHKAWGSEWIKKINALGPLAGELAAKSKSCDKVVDIALSDTKSKPKKKIVFYVDCKNKERFYISEDDIKSQNKVFSVNESFKNIDSEKYYKACLSGIKSRANHPSTVETSIFGRAIGSTPTGGILVRMDFTAKNSFGLEEKFTAACSWDDDKSEINIYNR
>NZ_CP048402.1|WP_163883773.1|31841_32249_+|phage-tail-protein
MEMKKKPNVNTIRFGDGYEQRIPQGINNNLRVYSVSFSGSEELINEIDKFLNDHGAVKSFLWTPYNSTQQGHFKCEEWGTSHKTGFFTLSAEFKEVIGSKSQQSNEESSSGQCVIPDDPPDLVAILNKKLEQLSD
>NZ_CP048402.1|WP_005733757.1|30097_30424_+|CRISPR-associated-endonuclease-Cas2
MSEGKFMRLIVFFDLPVTTKAKRKAANQFRQFLLKDGYQMLQLSVYARIIRGRDSMQKHNKRLSDHLPEEGSIRCLEVTEKQFAGMKILLGRLRLQEKKVNANQMLLF
>NZ_CP048402.1|WP_163883772.1|29190_30105_+|type-II-CRISPR-associated-endonuclease-Cas1
MSWRSILISQGGKLSLQRKQMLIQQSNNSFTVPLEDIAVIVIESKETLITAPLLSALAQYGVTLLTCDEQFLPCGQWLPFGQYYRQLKTLKLQLETTLPQKKQLWQKIVQQKIRNQGFVLEQVGYVNETKRLNRMANQVKSGDKENVEAQAALIYFQTLFGKTFKRSDENNINAHLNYAYTILRSAIARALVLYGWLPQLGIFHRSEVNPFNLADDFVEPFRPLVDLMVWQLWHTNQLTSGLSPNIKQKLIGLLHHQMSFQEETFSVLAAIDRTVGSFQAALTTPNANLLKLPEILPLKEHQYE
>NZ_CP048402.1|WP_163883771.1|25964_29135_+|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MQTTNLSYILGLDLGIASVGWAVVEINENEDPIGLIDVGVRIFERAEVPKTGESLALSRRLARSTRRLIRRRAHRLLLAKRFLKREGILSTIDLEKGLPNQAWELRVAGLERQLSRIEWSAVLLHLIKHRGYLSQRKNEKQINHKELGVLLSSVDANHQLLQSNDYRTPAELALKKFAKEEGHIRNQRGAYTHTFNRLDLLAELNLLFAQQHQFGNPHCKEHIQQYMTELLMWQKPALSGEAILKMLGKCTHEKNEFKAAKHTYSAERFVWLTKLNNLRILEDGAERALNEEERQLLINHPYEKSKLTYAQVRKLLGLSEQAIFKHLRYSKENAESATFMELKAWHAIRKALENQGLKDTWQDLAKKPDLLDEIGTAFSLYKTDEDIQQYLTNKVPNSVINALLVSLNFDKFIELSLKSLRKILPLMEQGKRYDQACREIYGHHYGEANQKTSQLLPAIPAQEIRNPVVLRTLSQARKVINAIIRQYGSPARVHIETGRELGKSFKERREIQKQQEDNRTKRESAVQKFKELFSDFSSEPKSKDILKFRLYEQQHGKCLYSGKEINIHRLNEKGYVEIDHALPFSRTWDDSFNNKVLVLASENQNKGNQTPYEWLQGKINSERWKNFVALVLGSQCSAAKKQRLLTQVIDDNKFIDRNLNDTRYIARFLSNYIQENLLLVGKNKKNVFTPNGQITALLRSRWGLIKVRENNDRHHALDAIVVACATPSMQQKITRFIRFKEVHPYKIENRYEMVDQESGEIISPHFPEPWAYFRQEVNIRVFDNHPDTVLKEMLPDRPQANHQFVQPLFVSRAPTRKMSGQGHMETIKSAKRLAEGISVLRIPLTQLKPNLLENMVNKEREPALYAGLKARLAEFNQDPAKAFTTPFYKQGGQQVKAIRVEQVQKSGVLVRENNGVADNASIVRTDVFIKNNKFFLVPIYTWQVAKGILPNKAIVAHKNEDEWEEMDEGAKFKFSLFPNDLVELKTKKEYFFGYYIGLDRATGNISLKEHDGEISKGKDGVYRVGVKLALSFEKYQVDELGKNRQICRPQQRQPVR
>NZ_CP048402.1|WP_005751839.1|25446_25740_+|DUF5377-domain-containing-protein
MTVQTEVLFSNNWNVRISDPGEEGAHSHFFETIYITLVAHIDGSNISYEFTRKVEEQVKIHRTFTDLSELFKFLGDYLDPVSMGFLGIKIGNLGVKA
>NZ_CP048402.1|WP_163883770.1|25160_25442_+|alternative-ribosome-rescue-factor-A
MAKKAKQPQSAQPYQHSRGVIRDNAICALLHDPLFRQRIEKKRKGKGSYQRKAKHVGKYFEKPDYKIFDLKDFIIGFFLTIFYNNATHLNSAR
>NZ_CP048402.1|WP_005717494.1|24737_25088_+|arsenate-reductase-(glutaredoxin)
MCVTIYHNPRCSKSRETLALLEAKYGQPKIELYLEQQFSASQLQQIAQKLGVTSFREMMRTKDELYRDLGLDKPEVSEQQLLEALVAHSSLLERPIVIHGDKAKIGRPPESVLEIL
>NZ_CP048402.1|WP_005757254.1|23593_24658_-|AI-2E-family-transporter
MIEMLKNWYNNRFSDPQAMGLFAILLFGFISIYFFSHLIAPLLIAIVLAYLLEWPIRVLTEKLKFPRLLSTAIIFGGFLGLILVIVLVFIPTLWTQTLNLVTDLPHMFNKLNEWLLSLPEHYPELVDYQTIDSVLSTVRSKILGFGESALKFSLTSLLSLVTLGIYAFLVPLMVFFLLKDKTELIASVSRFLPRNRTLASSVWKEMQQQIANYIRGKLFEIIIVTAVTYAIFIFFNLNYSLLLAVAVGLSVLVPYIGAVLVTIPIALVAVAQFGITPTFWYIITAYVISQILDGNLLVPFLFSEAVNLHPLTIIIAVLIFGGLWGFWGVFFAIPLATLVKAVVNAWPSTEQDTR
>NZ_CP048402.1|WP_163883769.1|20436_23535_+|efflux-RND-transporter-permease-subunit
MRFTDIFIRRPVLAVSISLLIIILGLQAIAKLAVREYPKMTTTVINVSTVYPGADASLIQAFITSKLEEAVAQADNIDYLSSKSSPNNSLITIKMKLNTEPNGALADVLAKVNSVRSQLPRGIDDPVITSSTGGTGMMYIQFSSTKLDASQVTDYIERVIKPQFFTVEGVAEVQIFGASDYALRIWLDPAKMAAQNLSAMAVRNALSSNNVQTAAGNDNGFYVTYKNKVETTTKSVEELGNLIISSQGDKLVRLRDIADVELNKSSDSSRAVANGFESVVLAINPTSSANPLVVAENVRPLYEQIKQNLPDSMQAEILYDTTIAINSSIDEVIKTILEATIIVLVVITLFIGSLRAILIPVITIPISLIGVIMLLQAFDFSINLMTLLALILAIGLVVDDAIVVLENVDRHIKLGETPFRAAIIGTREIAVPVISMTIALMAVYSPMALMDGITGSLFKEFALTLAGAVFISGIVALTLSPMMSSKLLKPHTDPSKLEQCIEKMLTTINQGYNYALNLVMASRRCMLAFAAVIFATLPFLFNGLASELTPAEDKGAFMVIGRAPSNVNVDYVQEAMHEYEQILKDTPEVDFSMVISGAMGSNQSFSVVTLKDWKERTRSQAEILAELNKKSVHIPEVALTGFNFPEINTGEQGPPIGFVISTASGYEDLANVAENFLQEMKKSGHFVYTALDLKFDTAQMRIKVDKEKAGTYGVTMQQISATLGSFLSAATIERVDIDGRAYRIIMQVKRGERLSPESLNNYYVTASNGKSVPLSSFLTMTLESQPTSLPRFSQLNSAVISAVPLPTKSTGEAIAWLKMAAKEYLPQGYNYDFTGEARQLVQEGNALAVTFVLAVVIIFLVLAIQFESIRDPLVIMISVPLAVSGALLMLNFLGFFRIPGTSLNIYSQVGLITLVGLITKHGILMCEVAKEEQLQHGKNRIEAITEAAKVRLRPILMTTAAMIAGLIPLLYASGAGAVSRFSIGIVIVSGLAIGTLFTLFVLPVIYSYIATEHKPLPEFDESIKPLTDKSAH
>NZ_CP048402.1|WP_064969094.1|33556_34930_-|argininosuccinate-lyase
MALWGGRFTQAADKRFKDFNDSLRFDYRLAEQDIEGSIGWSKALVSVGVLTVQEQQQLESALNTLLIEVRSNPQAILQDDAEDIHSWVESKLIDKVGNLGKKLHTGRSRNDQVALDIKMWCKQRVIELQSSLHALQCKLVETAENNQHAVMPGYTHLQRAQPITFAHWCMAYVEMLDRDYSRLTDAYQRMNSCPLGSGALAGTAYAIDREQLALDLGFDVATRNSLDSVSDRDHIVELLSTASLSMAHLSRFAEDMIIFNSGESNFVELSDRVTSGSSLMPQKKNPDACELIRGKAGRVMGALTGMLMTLKGLPLAYNKDMQEDKEGIFDALDTWQDCIDMAALVLDGIQVNVERTKEAALKGYSNATELADYLVAKGVPFRDSHHIVGETVVYAIQQHKALEALSVAEFKQFSDVVEEDVYQILSLQSCLNKRCAKGGVSPLRVAEAIAEAKARLS
>NZ_CP048402.1|WP_005754630.1|34945_35719_-|acetylglutamate-kinase
MKPLVIKLGGVLLDTPAAMENLFTALANYQQNFDRPLVIVHGGGCIVDELMQRLHLPVQKKNGLRVTPSDHIEIITGALAGIANKTLVAQAAKFHLNPVGLCLADGNLTYATQLDPELGHVATVVPKNPALLNNLLGEAFLPIISSIAVDKQGLLMNVNADQAATAIAALIQADLVMLSDVDGVLDANKQRLPELNGAQIEQLIKDNVITDGMVVKVNAALDAAKMLNQGVDIANWKYPEKLTALFAGEIIGTRIKP
>NZ_CP048402.1|WP_163883776.1|35719_36727_-|N-acetyl-gamma-glutamyl-phosphate-reductase
MQKAIIIGASGYTGAELARILIKHPKFELTGLYVSRQSQDANKCMSEIYPQLKHLVDLPLQPLPEQLTQLAQQADLVFLATAHEVSHDLAPIFLQNQCKVFDLSGAFRVNNAVFYRTFYGFEHQHPELLTQAVYGLAEWNAHQIKQTDLVAVAGCYPTVSQLSLKPLIAHNLLDLTQLPVINAVSGVSGAGRKASLTNSFCEVSLNAYGVFNHRHQPEIATHLGTEVIFTPHLGNFKRGILATITAKLKTGVSDEQIRVAYQHAYADKPLVRVYEQGLPSIKAVEFTPYCDIGFATQNGHIIIIGAEDNLLKGAAAQAVQCANIRYGLTETLGLL
>NZ_CP048402.1|WP_163883777.1|36834_37983_+|acetylornithine-deacetylase
MKKIPSFLQMYSALIASPTMSSIDPHFDQSNRTLIELLANWLSSLGFKTEVIPLEGSRDKFNLLATYGEGEGGLLLAGHTDTVPFDEGRWQFDPFKLTEKDGKFYGLGTADMKGFFAFVIDAVSQLDLTRLTKPLRILATADEETTMLGARTFIQHSHIRPDCAIIGEPTSLKPIRAHKGHVGEALRITGKSGHSSDPSKGINAIELMHEATGYLMQMRDELRQKYHHSAFNIPYPTMNFGAISGGDAVNRICACCELHFDIRPLPNLRLTDLNEMLQAKLAPMFEKWRDRISLQALHDPIPGYECAHSAQVVQVVEKLLGEQCETVNYCTEAPFIQQLCPTLVLGPGSIEQAHQPDEFLSAEFIDPTRELLTKLIGQFCTG
>NZ_CP048402.1|WP_005723324.1|38068_38857_-|glycosyl-transferase
MYKPVKNKHLILITNGMTRLLGNIVKTLSYPFHALFPKMRFTIPEFSPAKRQSHKKTKINRVIWQTNYSNKVTLPVYCNYLFNRLLSLSYDYRYVSTEARADYIKTHADERTFNAYSKLTDGAAQADFWRIFTLYHEGGIYMDIDGHLVWCLDSIIDEEDSEVVISRRGRYTNFFLASAKGNPFLKDTLEIIISNIEQKRIEGGVFCLTGPETLIKALENKEVNSRLDKLTCSQGTFTNEYFQYIDKKRGKWIHAKNEDLLK
>NZ_CP048402.1|WP_163883778.1|39609_41052_+|glutamate--tRNA-ligase
MKAEALFDLDPDVKVRTRFAPSPTGYLHVGGARTALYSWLYAKHHQGEFVLRIEDTDLERSTPEATAAILEGMAWLNLAWEHGPYFQTKRFDRYNQVIDQMIEQGLAYRCYCSKERLEDLRNTQEQNKQKPRYDRHCLGDHKHSPEQPHVVRFKNPTEGSVVFEDAVRGRIEISNAELDDLIIRRTDGSPTYNFCVVVDDWDMGITHVVRGEDHINNTPRQINILKALGAPIPTYAHVSMILGDDGQKLSKRHGAVSVMQYRDDGYLPEALLNYLVRLGWGHGDQEIFSVEEMIKLFELESVSKSASAFNTEKLLWLNHHYIRELPAEYVAKHLAWHYQDQGIDTSNGPALEDIVKMLAERCKTLKEMAAASRYFFEDFDSFDEAAVKKHFKAAAIEPLEKIKEKLTALESWDLHSTHQAIEQTAAELELGMGKVGMPLRVAVTGSGQSPSMDVTLVGIGKARTLVRIQKAIDFIKSQNV
>NZ_CP048402.1|WP_005723319.1|41500_43645_+|polyribonucleotide-nucleotidyltransferase
MNPIVKQFKYGQHTVTLETGAIARQATAAVMASMDDTTVFVTVVAKKDVKEGQDFFPLTVNYQERTYAAGRIPGGFFKREGRPSEGETLIARLIDRPIRPLFPEGFYNEIQIVATVVSVNPQICPDLVAMIGASAALSLSGVPFNGPIGAARVGFIDDQFVLNPTMNEQKQSRLDLVVAGTDKAVLMVESEADVLTEEQMLAAVVFGHQQQQVVIDAIKEFTAEAGKPRWDWVAPEPNTALIEKVKAIAEARLGEAYRITEKQARYEQIDAIKADVIAQITAEVAEGEDISEGKIVDIFTALESQIVRSRIIAGEPRIDGRTVDTVRALDICTGVLPRTHGSAIFTRGETQALAVATLGTERDAQIIDELTGERSDHFLFHYNFPPYSVGETGMIGSPKRREIGHGRLAKRGVAAVMPTLAEFPYVVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEDEKFVVLSDILGDEDHLGDMDFKVAGTRTGVTALQMDIKIEGITAEIMQIALNQAKSARLHILGVMEQAIPAPRADISDFAPRIYTMKIDPKKIKDVIGKGGATIRALTEETGTSIDIDDDGTVKIAAVDGNSAKEVMARIEDITAEVEAGAVYKGKVTRLADFGAFVSIVGNKEGLVHISQIAEERVEKVSDYLAVGQEVTVKVVEIDRQGRIRLTMKEVAPKQEHVDSVVADVAAEENA
>NZ_CP048402.1|WP_010907022.1|43728_44625_+|lipoprotein-NlpI
MKQFHPWLKCLLIFPFWVCCLTACVNHEQVFLSKEKLMLAEQHPNDHLEHEVMVAQISELLLVKGLKKEERAILHFERGVLYDSLGLWALARYDFDQTLALYPKLAAAFNYLGLYLLLEEDYSASLDIFNVLFELDPQYEYAFLNRGLNFYYVGRYELAQRDFLQFYQADKSDPYRTLWLYLNELKHNPQDASKNLAQRAMGLSDEYWGTYLVQYYLGKLSVKALFAQAQQFAQMNRAKYAEILTETYFYLAKLKLNSGQINEAETLFKLAIANQVYNFVEYRFALFELLKLKQSSKP
>NZ_CP048402.1|WP_005754621.1|44732_46565_+|DEAD/DEAH-box-helicase
MTETTMTFNDLGLPEFLLNAVSDLGFETPSPIQQSCIPNLLNGHDVLGMAQTGSGKTAAFSLPLLAQIDLDKKYPQMLVMAPTRELAIQVADACEHFCKYAKNTNIVTLYGGQRYDIQLRALRQGAQVVVGTPGRILDHIRRGTLDLSNLRFMVLDEADEMLRMGFIDDVETVMAELPEQHQTALFSATMPDPIRRITKRFMKDPKEIKIKSTQTTNPDITQSCWYVHGFRKNDALLRFLEVEKFDAAIIFTRTKTGTLDVTELLEKHGFRAAALNGDMTQQLREQTLDRLRNGSLDILVATDVAARGLDVERISLVVNYDIPLDAESYVHRIGRTGRAGRTGRALLFVEPRERRLLRNIEQLTKKPITEVEVPNHEVLQACRREKFKAKITVQLEHHDLGLYRSLLEDMFTADQDQEDIAAAMLMLLQGKQKLILPADPIIDRKTSRGDRGERRERGGRENPRSAERRGYGTPQAMDLYRIEVGRLDGAEVRHIVGAIANEGDINSRYIGHIKLYDDYTTIELPQGMPKELLGVFAKTRVMNKQMQMSFVGASNAGSSRDRDDFADRRGGKRKGRGDEPRFGREDRKFKEKSQRTFNDRPRRERRERQK
>NZ_CP048402.1|WP_163883779.1|46664_47513_-|ModD-protein
MLYFSDNELDDFLLEDIYRGDLTTHALGLESIPAKICFKRKNAGIVAGISIAEKLLRKLGIHPQVYVKEGEFVEAGSLLLSAKGSADKLHQAWKVVQLVLEWSCGVAQYTAEMISNAKAINPAAVVACTRKSIPNTRKLATNAVLAAGGHIHRQGLSETLLVFTNHRNLLSDPEDWQGIVTRLKQQAPENKITLEADNLVQFEQMLTADPDIIQLDKFTLEQVKQALHLLALANKNITLSVAGGVNKHNVAEYAKLGIQLFITSAPYYAAPEDIKVIIEKQV

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Crispr_ID: NZ_CP048402_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048402_3

300573-301080

TypeI-F

Consensus_repeat	Method
GTTCACCATCGTGTAGATGGCTTAGAAA	PILER-CR
GTTCACCATCGTGTAGATGGCTTAGAAA	CRISPRCasFinder
GTTCACCATCGTGTAGATGGCTTAGAAA	CRT

8 spacers

cas6f,cas7f,cas5f,cas8f,cas1,cas3-cas2

The CRISPR arrays of NZ_CP048402_3

>merge|NZ_CP048402|3|300573-301080|PILER-CR,CRISPRCasFinder,CRT
GTTCACCATCGTGTAGATGGCTTAGAAATTATAGCGTTCTACATCATCTTTTGCGATAGGGTTCACCATCGTGTAGATGGCTTAGAAATGCGGGCTTTTGTCCTACTTTTACTGTTCCTAGTTCACCATCGTGTAGATGGCTTAGAAATGTGCTGTATGCCGTTGCGGTGCTACTTACCCGTTCACCATCGTGTAGATGGCTTAGAAAATATCATCTGCTTTACTTCCCATGATTCCACCGTTCACCATCGTGTAGATGGCTTAGAAAGTTTGAGTCGAAGTTATTTGTCTGATTAATCAGTTCACCATCGTGTAGATGGCTTAGAAACCTAGCAAGGTTATTAAATCACGTGAACGGTAGTTCACCATCGTGTAGATGGCTTAGAAAATAGTGAAAATCCTGTCGCGCTTACACCGAACGTTCACCATCGTGTAGATGGCTTAGAAAATATCTGCAAAGTTCGTCACAAAGACTGGAGTGTTCACTATCGTGTAGATAGCTTAAAAA

>NZ_CP048402|3|2|300573-301020|PILER-CR
GTTCACCATCGTGTAGATGGCTTAGAAA	TTATAGCGTTCTACATCATCTTTTGCGATAGG
GTTCACCATCGTGTAGATGGCTTAGAAA	TGCGGGCTTTTGTCCTACTTTTACTGTTCCTA
GTTCACCATCGTGTAGATGGCTTAGAAA	TGTGCTGTATGCCGTTGCGGTGCTACTTACCC
GTTCACCATCGTGTAGATGGCTTAGAAA	ATATCATCTGCTTTACTTCCCATGATTCCACC
GTTCACCATCGTGTAGATGGCTTAGAAA	GTTTGAGTCGAAGTTATTTGTCTGATTAATCA
GTTCACCATCGTGTAGATGGCTTAGAAA	CCTAGCAAGGTTATTAAATCACGTGAACGGTA
GTTCACCATCGTGTAGATGGCTTAGAAA	ATAGTGAAAATCCTGTCGCGCTTACACCGAAC
GTTCACCATCGTGTAGATGGCTTAGAAA

>NZ_CP048402|3|3|300573-301080|CRISPRCasFinder
GTTCACCATCGTGTAGATGGCTTAGAAA	TTATAGCGTTCTACATCATCTTTTGCGATAGG
GTTCACCATCGTGTAGATGGCTTAGAAA	TGCGGGCTTTTGTCCTACTTTTACTGTTCCTA
GTTCACCATCGTGTAGATGGCTTAGAAA	TGTGCTGTATGCCGTTGCGGTGCTACTTACCC
GTTCACCATCGTGTAGATGGCTTAGAAA	ATATCATCTGCTTTACTTCCCATGATTCCACC
GTTCACCATCGTGTAGATGGCTTAGAAA	GTTTGAGTCGAAGTTATTTGTCTGATTAATCA
GTTCACCATCGTGTAGATGGCTTAGAAA	CCTAGCAAGGTTATTAAATCACGTGAACGGTA
GTTCACCATCGTGTAGATGGCTTAGAAA	ATAGTGAAAATCCTGTCGCGCTTACACCGAAC
GTTCACCATCGTGTAGATGGCTTAGAAA	ATATCTGCAAAGTTCGTCACAAAGACTGGAGT
GTTCACTATCGTGTAGATAGCTTAAAAA

>NZ_CP048402|3|2|300573-301080|CRT
GTTCACCATCGTGTAGATGGCTTAGAAA	TTATAGCGTTCTACATCATCTTTTGCGATAGG
GTTCACCATCGTGTAGATGGCTTAGAAA	TGCGGGCTTTTGTCCTACTTTTACTGTTCCTA
GTTCACCATCGTGTAGATGGCTTAGAAA	TGTGCTGTATGCCGTTGCGGTGCTACTTACCC
GTTCACCATCGTGTAGATGGCTTAGAAA	ATATCATCTGCTTTACTTCCCATGATTCCACC
GTTCACCATCGTGTAGATGGCTTAGAAA	GTTTGAGTCGAAGTTATTTGTCTGATTAATCA
GTTCACCATCGTGTAGATGGCTTAGAAA	CCTAGCAAGGTTATTAAATCACGTGAACGGTA
GTTCACCATCGTGTAGATGGCTTAGAAA	ATAGTGAAAATCCTGTCGCGCTTACACCGAAC
GTTCACCATCGTGTAGATGGCTTAGAAA	ATATCTGCAAAGTTCGTCACAAAGACTGGAGT
GTTCACTATCGTGTAGATAGCTTAAAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048402.1\|WP_163883840.1\|296531_297866_+\|type-I-F-CRISPR-associated-protein-Csy1	cas8f	cd09675_cas8f_CAS-I-F	gnl\|CDD\|274203
NZ_CP048402.1\|WP_005728799.1\|299871_300432_+\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	cas6f	cd09674_cas6f_CAS-I-F	gnl\|CDD\|274202
NZ_CP048402.1\|WP_163883839.1\|294141_296301_+\|bifunctional-23S-rRNA-(guanine(2069)-N(7))-methyltransferase-RlmK/23S-rRNA-(guanine(2445)-N(2))-methyltransferase-RlmL	unknown	unknown	gnl\|CDD\|236981
NZ_CP048402.1\|WP_005721377.1\|311988_312375_+\|Fe-S-cluster-assembly-scaffold-IscU	unknown	unknown	gnl\|CDD\|183087
NZ_CP048402.1\|WP_014325846.1\|298861_299869_+\|type-I-F-CRISPR-associated-protein-Csy3	cas7f	cd09677_cas7f_CAS-I-F	gnl\|CDD\|378222
NZ_CP048402.1\|WP_005721273.1\|290258_290528_+\|30S-ribosomal-protein-S15	unknown	unknown	gnl\|CDD\|180170
NZ_CP048402.1\|WP_046333890.1\|297875_298859_+\|type-I-F-CRISPR-associated-protein-Csy2	cas5f	cd09676_cas5f_CAS-I-F	gnl\|CDD\|274204
NZ_CP048402.1\|WP_005721328.1\|310542_311757_+\|IscS-subfamily-cysteine-desulfurase	unknown	unknown	gnl\|CDD\|184450
NZ_CP048402.1\|WP_005751243.1\|309235_309952_+\|tRNA-(cytosine(32)/uridine(32)-2'-O)-methyltransferase-TrmJ	unknown	unknown	gnl\|CDD\|223639
NZ_CP048402.1\|WP_005721326.1\|310030_310495_+\|Fe-S-cluster-assembly-transcriptional-regulator-IscR	unknown	unknown	gnl\|CDD\|273927
NZ_CP048402.1\|WP_005721379.1\|312444_312768_+\|iron-sulfur-cluster-assembly-protein-IscA	unknown	unknown	gnl\|CDD\|213674
NZ_CP048402.1\|WP_005725868.1\|308217_309021_-\|inositol-1-monophosphatase	unknown	unknown	gnl\|CDD\|236753
NZ_CP048402.1\|WP_163883838.1\|290665_291778_-\|iron-sulfur-cluster-carrier-protein-ApbC	unknown	unknown	gnl\|CDD\|183270
NZ_CP048402.1\|WP_010906575.1\|291959_294008_+\|methionine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234655
NZ_CP048402.1\|WP_163883842.1\|305567_307424_+\|response-regulator	unknown	unknown	gnl\|CDD\|236842
NZ_CP048402.1\|WP_005721321.1\|307564_308155_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048402.1\|WP_163883841.1\|302189_305510_+\|type-I-F-CRISPR-associated-helicase-Cas3	cas3-cas2	cas3-cas2-CAS-I-F	gnl\|CDD\|187804
NZ_CP048402.1\|WP_005753659.1\|301228_302209_+\|type-I-F-CRISPR-associated-endonuclease-Cas1	cas1	cd09718_cas1_CAS-I-F	gnl\|CDD\|187849
NZ_CP048402.1\|WP_163883837.1\|286876_290092_+\|TonB-dependent-hemoglobin/transferrin/lactoferrin-family-receptor	unknown	unknown	gnl\|CDD\|273808
NZ_CP048402.1\|WP_005751227.1\|286319_286835_+\|heme-utilization-protein-HutZ	unknown	unknown	gnl\|CDD\|200361

Protein	Function_ID	Function_description	E-value
NZ_CP048402.1\|WP_163883840.1\|296531_297866_+\|type-I-F-CRISPR-associated-protein-Csy1	gnl\|CDD\|274203	TIGR02564, conserved_hypothetical_protein, CRISPR type I-F/YPEST-associated protein Csy1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This protein family, typified by YPO2465 of Yersinia pestis, is a CRISPR-associated (Cas) family strictly associated with the Ypest subtype of CRISPR/Cas locus. This family is designated Csy1, for CRISPR/Cas Subtype Ypest protein 1.	1.02504e-148
NZ_CP048402.1\|WP_005728799.1\|299871_300432_+\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	gnl\|CDD\|274202	TIGR02563, conserved_hypothetical_protein, CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This protein family, typified by YPO2462 of Yersinia pestis, is a CRISPR-associated (Cas) family strictly associated with the Ypest subtype of CRISPR/Cas locus. This family is designated Csy4, for CRISPR/Cas Subtype Ypest protein 4.	3.31771e-90
NZ_CP048402.1\|WP_163883839.1\|294141_296301_+\|bifunctional-23S-rRNA-(guanine(2069)-N(7))-methyltransferase-RlmK/23S-rRNA-(guanine(2445)-N(2))-methyltransferase-RlmL	gnl\|CDD\|236981	PRK11783, rlmL, bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL.	0
NZ_CP048402.1\|WP_005721377.1\|311988_312375_+\|Fe-S-cluster-assembly-scaffold-IscU	gnl\|CDD\|183087	PRK11325, PRK11325, scaffold protein; Provisional.	1.51567e-94
NZ_CP048402.1\|WP_014325846.1\|298861_299869_+\|type-I-F-CRISPR-associated-protein-Csy3	gnl\|CDD\|378222	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2463 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy3, for CRISPR/Cas Subtype Ypest protein 3.	0
NZ_CP048402.1\|WP_005721273.1\|290258_290528_+\|30S-ribosomal-protein-S15	gnl\|CDD\|180170	PRK05626, rpsO, 30S ribosomal protein S15; Reviewed.	3.85836e-50
NZ_CP048402.1\|WP_046333890.1\|297875_298859_+\|type-I-F-CRISPR-associated-protein-Csy2	gnl\|CDD\|274204	TIGR02565, conserved_hypothetical_protein, CRISPR type I-F/YPEST-associated protein Csy2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This protein family, typified by YPO2464 of Yersinia pestis, is a CRISPR-associated (Cas) family strictly associated with the Ypest subtype of CRISPR/Cas locus. This family is designated Csy2, for CRISPR/Cas Subtype Ypest protein 2.	5.57537e-151
NZ_CP048402.1\|WP_005721328.1\|310542_311757_+\|IscS-subfamily-cysteine-desulfurase	gnl\|CDD\|184450	PRK14012, PRK14012, IscS subfamily cysteine desulfurase.	0
NZ_CP048402.1\|WP_005751243.1\|309235_309952_+\|tRNA-(cytosine(32)/uridine(32)-2'-O)-methyltransferase-TrmJ	gnl\|CDD\|223639	COG0565, LasT, rRNA methylase [Translation, ribosomal structure and biogenesis].	5.62391e-118
NZ_CP048402.1\|WP_005721326.1\|310030_310495_+\|Fe-S-cluster-assembly-transcriptional-regulator-IscR	gnl\|CDD\|273927	TIGR02010, Putative_HTH-type_transcriptional_regulator, iron-sulfur cluster assembly transcription factor IscR. This model describes IscR, an iron-sulfur binding transcription factor of the ISC iron-sulfur cluster assembly system. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other, Regulatory functions, DNA interactions].	5.78928e-83
NZ_CP048402.1\|WP_005721379.1\|312444_312768_+\|iron-sulfur-cluster-assembly-protein-IscA	gnl\|CDD\|213674	TIGR02011, Protein_yfhF., iron-sulfur cluster assembly protein IscA. This model represents the IscA component of the ISC system for iron-sulfur cluster assembly. The ISC system consists of IscRASU, HscAB and an Isc-specific ferredoxin. IscA previously was believed to act as a scaffold and now is seen as an iron donor protein. This clade is limited to the proteobacteria. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	6.36459e-65
NZ_CP048402.1\|WP_005725868.1\|308217_309021_-\|inositol-1-monophosphatase	gnl\|CDD\|236753	PRK10757, PRK10757, inositol-1-monophosphatase.	5.93151e-152
NZ_CP048402.1\|WP_163883838.1\|290665_291778_-\|iron-sulfur-cluster-carrier-protein-ApbC	gnl\|CDD\|183270	PRK11670, PRK11670, iron-sulfur cluster carrier protein ApbC.	0
NZ_CP048402.1\|WP_010906575.1\|291959_294008_+\|methionine--tRNA-ligase	gnl\|CDD\|234655	PRK00133, metG, methionyl-tRNA synthetase; Reviewed.	0
NZ_CP048402.1\|WP_163883842.1\|305567_307424_+\|response-regulator	gnl\|CDD\|236842	PRK11091, PRK11091, aerobic respiration control sensor protein ArcB; Provisional.	0
NZ_CP048402.1\|WP_163883841.1\|302189_305510_+\|type-I-F-CRISPR-associated-helicase-Cas3	gnl\|CDD\|187804	cd09673, Cas3_Cas2_I-F, CRISPR/Cas system-associated protein Cas3/Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas3/Cas2 fusion; This protein includes both DEAH and HD motifs for helicase and N-terminal domain corresponding to Cas2 RNAse; signature gene for Type I and subtype I-F.	0
NZ_CP048402.1\|WP_005753659.1\|301228_302209_+\|type-I-F-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187849	cd09718, Cas1_I-F, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	0
NZ_CP048402.1\|WP_163883837.1\|286876_290092_+\|TonB-dependent-hemoglobin/transferrin/lactoferrin-family-receptor	gnl\|CDD\|273808	TIGR01786, hemoglobin-haptoglobin-binding_protein, TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein. This model represents a family of TonB-dependent outer membrane receptor/transporters acting on iron-containing proteins such as hemoglobin, transferrin and lactoferrin. Two subfamily models with a narrower scope are contained within this model, the heme/hemoglobin receptor family protein model (TIGR01785) and the transferrin/lactoferrin receptor family model (TIGR01776). Accessions which score above trusted to this model while not scoring above trusted to the more specific models are most likely to be hemoglobin transporters. Nearly all of the species containing trusted hits to this model have access to hemoglobin, transferrin or lactoferrin or related proteins in their biological niche. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins].	3.97972e-77
NZ_CP048402.1\|WP_005751227.1\|286319_286835_+\|heme-utilization-protein-HutZ	gnl\|CDD\|200361	TIGR04110, hypothetical_protein_VSWAT3_12502, heme utilization protein HutZ. Members of this family are heme utilization proteins, typically designated HutZ. They are members of the PPOX family (pfam01243) and, except for the lack of an N-terminal extension, are closely related to one form of heme oxidase (1.14.99.3), HugZ (TIGR04109). Members typically are found in a three-gene operon with radical SAM enzyme HutW and a protein of unknown function, HutX.	2.01653e-97

>NZ_CP048402.1|WP_005728799.1|299871_300432_+|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4
MTTHYIELKAIPQMDMLQSEVIGHCMQILHQFLPHFEGRVGVAFPAYGLGRTLGGIVRLFANQEDCNQLHQQLLRSGLSDYALISEVSKTPLPTEYRSYSRVHRKGQSAIRRTEKRLKSQGRWDESIRADMQQRQQNVAFFPHCHLKSASTGQRFILAVKENRMSQSCVGVFNAYGLSNSATVPHF
>NZ_CP048402.1|WP_014325846.1|298861_299869_+|type-I-F-CRISPR-associated-protein-Csy3
MSKLSTPSVLAFERNLDISDAIFAQKDSKNDKDAPVPLRIREKSVRGTISNRLKNTITNDPAKLDAETEKANLQRVDVATLDDDKDTLVATFSVKVLPFTGRPNVCNDQDYQHQVMTTVAQYLSEQGMDELAKRYATNIANARWLWRNRMGAEKIKIEVTCGENTLHFDDAKQFSLNHFDHQDDKIHQIAKEIKQGLLGEKFVILYVTAYANMGYGQEVYPSQELVLDNSTNNRKSKILYEINQKAGMHSQKVGNAIRTIDTWYAEEVAFPIAAEPYGAVTTLGTAFRQPKTKKNDFYTLFDNWLLKGEVPPVEQQHYVMSVLIRGGVFGASGKE
>NZ_CP048402.1|WP_046333890.1|297875_298859_+|type-I-F-CRISPR-associated-protein-Csy2
MFQTDFYILFDHIKVQSANAISGPLSYGFPALTGLTGAMHALNRKLTHHPVQFGGVMVACHDYELQTYQNSAFSDRTFKQTRNPIKRNGETASIIEEGKIHLDLSLVVEVHVQDDRVFEALTDKTSQASQDFLQTCKNLLWQQRIAGGSVLEIGNVQLFNLEEDQDIPLALMPAFVLMDAKQELANITEELKTGLRIGQLDEEGNVQKSCLPSCPDATALDALLEMATVHHIPEHANATASAWQTYSVKKGRGWLVPLPVGYQAISPLFAPGQLQHCRTQQYPSQYVETLYSLGKWVFPLSLPENLSQCFWRYTALQNNLYLISQGE
>NZ_CP048402.1|WP_163883840.1|296531_297866_+|type-I-F-CRISPR-associated-protein-Csy1
MSYTFRKRIDLFLQEQNLKKSESDRKKLAKATDPTEIEQLTQLIQEFDQKYQFDTWIANAANVMAKQLKFGTHIAKGIHPDTKGDNVNFQPSDSLPPEYVGSQSVSHLVLDANGNAAALPLASFFNFIVDEEKQVKLRDLLLADDPRLAGCFSDDLALSDVYKKQFQQALTGDLTQPETHERNKQVFWANGENPIEDDDYTCLIPLYPSSLTHAFYQKVNNNRYSEQNKQARENRQKKTVEQAHYLSINQLATVVLGGSKPQNISQLMSAQGGRNYLLPSLPPIIPSSRYFRLSPSQTTIFNGHLAYACRYGLRQLFDVVEARKNGYQVRDSRIDALNNILRTFLFHANLLQKQPAGWSKDYQLEMCEKYWLDPKRVHLPDEEAFRAEYEKGEWVAEVERRFALWLNKRLQKRFPHIAKDFDDVEYHEWRRNIRRTLRYRLRHP
>NZ_CP048402.1|WP_163883839.1|294141_296301_+|bifunctional-23S-rRNA-(guanine(2069)-N(7))-methyltransferase-RlmK/23S-rRNA-(guanine(2445)-N(2))-methyltransferase-RlmL
MKQLFATTARGFEELLKVELTDLGAMDCQITQGGVHFHADEETQYRVLLWTRLASRILLPIVTCKVYSDLDLYSAVVGQNWLDYFDEKAHFMVDFNGTNREIRHTQFGAMRVKDGIVDYFERVGKPRPNVDKSQPDIRIHAYLNREELVISLDLSGDALHMRGYREDTGKAPLRETLAAAIVLRSGWQLGTPLVDPMCGSGTLLIEAAQMQANIAPQLHRLHWGFDFWKGHNQQAWDKVKGEAIELAQQTFNQNQKANFYGCDLDHRVLQKAKRNAQNAGVAHLIQWQQGDVAALKNPFVEEKGTVICNPPYGERLGTTPALIALYSVFGQRLKQQFADWNVSIFSGEPALLDCLRLRSHRQFKAKNGPLDCVQKNYHISARATASDENTQNSPEIDRTLSATQVAVDFANRLQKNSKKIEKWAKQQGINAYRLYDADLPEYNLAVDRYDDHIVVQEYAAPKNIDENKARQRLLDAVTATLQVTGVETNKLILKVRQKQKGTNQYEKLANKGDYFYVNEYGAKLWVNLTDYLDTGLFLDHRLTRKMLGEMAKGKDVLNLFAYTGSATVHMALGGAKSTTTVDMSNTYLNWAEQNLLLNELEGKQHKLIQADCLQWLARCDRQFDLIFVDPPTFSNSKRMEDSWDVQRDHIKLMTQLKRILRPNGTIVFSNNKRGFKMDVEGLETLGLSAVDITAKTLPLDFERNKQIHNCWVVRLKADL
>NZ_CP048402.1|WP_010906575.1|291959_294008_+|methionine--tRNA-ligase
MANSARDILVTCALPYANGAIHLGHLLEHIQADIWVRFQRMRGHKVHFICADDAHGTPIMLNADKLGITPEALIARSKADHVADFEGFNISYDNYHSTHSPENEALTAEMYKKLRANGFIKSRTISQLFDPEKGMFLPDRFVKGTCPKCKAEDQYGDNCEVCSSTYSPTELINPRSVVSGATPVLKESEHFFFDLPAFEGMLKAWIKSGSLQPEIANKMQEWFESGLQQWDISRDAPYFGFKIPDTEDKYFYVWLDAPIGYMASFKNLCDKTGLNFDDFWKKDSSAELYHFIGKDIVYFHSLFWPAMLDGCDLRKPTNVFAHGYVTVNGVKMSKSRGTFIQASTYLRHLAPEYLRYYYAAKLNNRIEDLDLNLEDFVQRLNADVVNKFVNLASRSAGFITKRFDGKLSAEIAEPELLAEFVEKAAQIATYYEEREFGKVVREVMQLADKANKYIDDKAPWVMAKEEGREAELQAVCSMALQLFRVLAIYLKPVIPQIIARAEAFLQDELTWESLNRPLLNHAILPFKALAQRLDPKQIEAIVNETKEQFVAQQALEQKNSAKAEPASQVEPIAETISIEDFAKLDLRVAKVMKCEAVPESNKLLRFELDLGDHTRQVFSGIKEAYNNPAELEGRFVVVIANLAPRKMRFGVSEGMILSAGTGGADLFLLNADQGVKPGMQVK
>NZ_CP048402.1|WP_163883838.1|290665_291778_-|iron-sulfur-cluster-carrier-protein-ApbC
MGILFSDSLTDSQKQAIQNAFQQFQHPSLQKDLVSLNAIKKIEKGGETLRIEISMPFAWNTAFEQLKSALSAELLTLAECKDIKWQLNYQIATLKRANSHPAVKGVKNIIAVTSGKGGVGKSTISVNLALALQKQGARVGILDADIYGPSIPHMLGVADQRPTSPDNQHITPIQAHHIFANSIGFLMEPDNATIWRGPMASSALSQLLQETLWPDLDYLVIDMPPGTGDIQLTLSQQIPVTGAVVVTTPQDIALLDAIKGVAMFERVSVPVLGIIENMSMHICSNCGHQETIFGTGGAERIAQKYNVKVLGQQALHIRLREDLDKGIPTVVAAPESDIAQSFMQLAEKVATELYWQGSVIPSEIMFKEVK
>NZ_CP048402.1|WP_005721273.1|290258_290528_+|30S-ribosomal-protein-S15
MSLSTEKKAAIVAEFGRDAKDTGSSEVQIALLTAQINHLQSHFATHKKDHHGRRGLLRMVSRRRKLLDYLKRTNLELYTSTIARLGLRR
>NZ_CP048402.1|WP_163883837.1|286876_290092_+|TonB-dependent-hemoglobin/transferrin/lactoferrin-family-receptor
MRTTTIKFSAITLALLSYCGAILADSHQEATELDTITVSSQQDEMNIKEKKVGETVKTASQLKRQQVQDSRDLVRYETGVTVVEAGRFGSSGYAIRGVDENRVAITVDGLHQAETLSSQGFKELFEGYGNFNNTRNSVEIETLKQASINKGASSVKTGSGALGGAVIFETKDARDLLVEKDWHLSYKKGYNTADNQELNTFTIAGRYKWFDALIVRTERRGYETENFGYKSYNDRVQGKIREKADPYRRTQESTLLKFGFQPNENHRFAVMADLYETRSRGHDFSYSLKPNTIHHTYDEVELRHTNDSNRRTNYAFSYENFSANPFYDTLKVTYSDQKIRARARTDDFCDGNEKCPLQTNPLGMKYNEKNQLVGEDGKLASYLKKDASNLPDSDHQFDLPVVEKWDGRSTRKKPKWSRVNWNDLPEGYYLKVGNKSCDDDYPYGVNPPRDGTPETCKATLTKRGSEVPAESYFKINNQHYNLLTEHKGLISDEQRVPTNVPRIFSCDGINCEYKTITAFNDDGTTTEIPFTVFELNGKKFAKTEVSGSNQLNAPKIFVPNKKGYNQNLWSQRDLITHTKQVNLDLSKYLELGQIQHNFAYGGLWSETQKEMINHAGSASLDIQWWALYKDCGDPQCTKTDTFSFLIPVKADTGAVYFNDDFKVNDYLSFGLGYRYDRIKYKPHYTPGTTPKIPDDMVTNLYVSEPAFDPNDLMGEENRLKREANANANIKYIAQPKKYSASSYNLNVTVDPLSWLRLQAKYSKGFRAPTGEEIYFTFKHPDFSIKPNRDLEEETAKTKEFAMTLYNDYGFITVSGFETKYKNFIDLMYLGPKALQGRSALTRFETWQNVNRDEAKVTGIEISSKFNLAAVWDKLRDFNMSYKFSYQKGRVKVKETVLQAPPQNATGIEALTYKTLGEVETTVPMNAIQPQTHVIGLGYNHNSGKFGFDLFVTHATAKKAKDTYNMFWQAQRAEDVAKYPKEEDRIVKDNKQRWRSNAYTLVDVIAYAKPIKNVTLQFGVYNLTNKKYLTWDSARSIRPFGTSNLIDQRTGAGINRFNAPGRNFKLSAEITF
>NZ_CP048402.1|WP_005751227.1|286319_286835_+|heme-utilization-protein-HutZ
MTTNRQEVLQNRLGPEIQELKAQCKTVMLATVGEDGNPNVSYAPFAINNGEYQVFISTIARHARNLQEVPKVSLMLIEDESQSRQIFARRRLSFDAVARVVERESEEWHSGVEALKARHGALMDELSRMKDFHLFSFKPSQGLFVKGFGQAFQVSNDDLVSFVHLVEGHQE
>NZ_CP048402.1|WP_005753659.1|301228_302209_+|type-I-F-CRISPR-associated-endonuclease-Cas1
MRKTPYIPSSDLKTIMHSKRANIYYLEHCRVLLNGGRVEYVTDEGRESLYWNIPIANTSCLLLGSGTSITQAAMRELSKAGVMVGFCSGGGTPLFNGTEAEIGCEFFSPQSEYRPVMYLQQWCKFWFDDEKRLAVAKALQQQRLALLEPIWSKLEWVYSCEKLTALVTQYQHEFAQAAHSQALLAAEGRLTTKLYALANQATMNEPDFKRSERGKSIDLVNQFLDHGNYLAYGLGATACWVLGLPHGLAVLHGKTRRGGLVFDAADIIKDSMILPQAFISAQNGDSEKEFRQACIQNLLRFGALDIIIERLQQLALQGASDEYFAG
>NZ_CP048402.1|WP_163883841.1|302189_305510_+|type-I-F-CRISPR-associated-helicase-Cas3
MNILLVSQCQKNALTETRRILDQFAERCGDRVWQTAITQAGLETLYKMLRQTARKNTAVACYWTHRKNSAELLWIVGDRRQFNDQGRVPTNRTQRNILRAEEEMAWQDAYSLQILTALSALLHDVGKSSVGFQAKLDKTKNASRVADSYRHEWISARLFEAMIEGCQTDQAWLERLANWQVFEETNPTWFSKIIQDRPNENHFSDFAYLPPLARRVIWLITSHHRLPFTHDISRSQDCIKNLRKYAKLTFESLFKAYKPAVGWVSNGTEHPTPQAFWQFQRVATQSQAWQKHMARWAKKALNHPALFSVSENADPFLLLLARLCLMTGDHYYSAQDQNEKLGELNFPLLANTYRENHQPKQRLDEHLIGVCQTAVRFARLLPKFPRELPRIKQHKPFVQLAKDRFAWQNKAVNVARLLQKTSESQGFFGVNMASTGCGKTLANAKMMYALNDSKQGARFTIALGLRVLTLQTGSALKKRLHLSDQDLAVLVGGSAVKKLYALQQEKQNQLAQQGSESAEDWLEDIQVEGATYIESAVENEAILSFLSKDDKTKKLLYAPIVSCTLDHLISASESVRGGHHIVPILRLLTSDLILDEPDDFAQEDLPALSRLVYLAGLFGSRVLLSSATLTPDFITGLFKAYQAGRKIYNQQKGIVAALPICCAWVDEFQQVQANCGQDEQFIQQHDEFVRKRAENLAKSPVRRQAEILSLPSLKPREGEDLHYGLLADTLLQKAMALHDLHGQTDPHSQKKVSVGLIRFSNIEPMIPLAKALFALPASEKFADYQVHLCCYHSRQLLLLRSYLEEKLDKILDRHTPEQLFQHEEIALPMSQYKAKNHLFIVLGSPVTEVGRDHDYDWVIVDPSSMRSIIQLAGRVWRHRAEKVAEQPNIALLPINWRGLKVRYQQKDVIYHRPGFESHQHKLATHKLEQLISQRDLAHIQATPRIVKPEVLQASTQLADLEHHAIASLLNHPSENLVNLYWDPRYCNYLLANLPLMSEFRKSMAELEVVCVPDDDSHWGFGFYRAQKRDEETLSALPEIQYEPIQQDKHAVVQPWLVASLDTVLSDLAEQLNVVSPEWIAPTYLCASLPQYDGQLDWHYNEVYGFW
>NZ_CP048402.1|WP_163883842.1|305567_307424_+|response-regulator
MKNIKYFTQKYVDWVIRLGRLRFSILGVIVLAILALCTQALLSLFIIGEVYWVDMIRSVVFGLISAPFVIYFFTVLVEKLERSRLGLAKMVENLRKEVSERVLAEKKLSIALDNIEKTSRDKTRLMATISHELRTPLNGIIGLSRILLDEKLTETQQNYLKTIHVSAISLGHIFSDIIDLEKIDARRIELNAKAVELNSFLNDISNVARLLAQQKKLAFQLVTDKNLPTWFMVDYARLSQILWNLIGNAVKFTQEGRITLNVKRVSEYQISFSVSDTGIGIPANELPRVFEMYYQVQSSGHKPLGSGIGLAISQTIAQLMGGDLYATSEMGKGSCFTLMLPVKEVEKPVRVQNQMPSTLNILLVEDIEVNVVVAKSVLEKLGYVVDVAMTGQQAIEKFEQQYYDLLLLDIQLPDMSGFAVAKYLREGYEDGRYDFLPPLIALTANVMHDKKEYQAQGMDDVLRKPLSIEELTACLVEYFDHDVSLCLETPTTHQITQDATHFDVKMLSELVEMLGTDFVLKNLALFKETMPEYMQALMTAYSVYQQDESQKADVLSCAHKIKGAAASLGLKRIQQIAAQAQDPEQGEWTENIHDWVQQLAQYWLLDVEALERYLNKSA
>NZ_CP048402.1|WP_005721321.1|307564_308155_+|hypothetical-protein
MKIFAVLSAFLMPFVVPNTTVNGYKDLRFGMTIEQAKESKLCEDQWHLPADDDWRRVVRGYWVCDKFRFDDGYAVARLRFIGGQLKSIELKMPEYPKYPAELLLHVLEEKYGKTIEVEQRDLIEEDILQGKIRKRRKNESALLDTYQFAKGTVSLTLLTYNGIPQPAEIIYSAPELLLLEKKLEDRPQRRTLLRDL
>NZ_CP048402.1|WP_005725868.1|308217_309021_-|inositol-1-monophosphatase
MNPMLNIAIRAARKAGNVIAKGYERRDDLQTTLKSTNDYVTNIDKASEEAIIEVIRKSYPDHTIITEESGALEGKDSDIQWVIDPLDGTTNFVKGLPHFSVSIAIRVKGRTEVGVVYDPIRNELFTAVRGEGAKINDMRLRVENKRDLAGTVLTTGFPFKQTRLMPMQFAMMNNLIQDCADFRRMGSAALDLCYVAAGRVDGYFEVGVKAWDIAAGDLIVREAGGLVCDFNGGHSYLTSGHLVAAAPRIVKEILNKIQPCLSDEFKK
>NZ_CP048402.1|WP_005751243.1|309235_309952_+|tRNA-(cytosine(32)/uridine(32)-2'-O)-methyltransferase-TrmJ
MLENIRIVLVETSHSGNIGSAARAMKTMGLNQLYLVAPKQPLDEHAIALSAGAEDVLKQAKIVASFDEAVADCALVVGTSARLRHLQNSLIEPRECGTHAIAYAKQAPVAIVFGRERIGLTNEELLKCRYHLTIPANPDYSSLNLAMAVQLICYELRLAFLSQQAMTESLSTIDNTYPTHTEIEHFFQHTERLYTALGFIQNQGVMPKLRRLYQRVQLEKNELNILRGMLTAVEKRLK
>NZ_CP048402.1|WP_005721326.1|310030_310495_+|Fe-S-cluster-assembly-transcriptional-regulator-IscR
MKLTSKGRYAVTAILDIALNSNRGPVSLSDISERQHISLSYLEQLFAKLRRHGLVKSVRGPGGGYQLGLPANRISVGMVINAVNENIDVTRCLGRGDCQEGTECLTHSLWKELSLRIEAFLNEITLEELVEKNRQKRATIEFRGDFDNLIILDN
>NZ_CP048402.1|WP_005721328.1|310542_311757_+|IscS-subfamily-cysteine-desulfurase
MKLPIYLDYAATCPVDERVAKKMMEYLTVEGNFGNPASRSHKFGWQAEEAVDVARNHIADLIGADSREIVFTSGATESDNLAIKGAAHFYQSKGKHIITCKTEHKAVLDTCRQLEREGFEVTYLNPKSDGLIDLEELKNAMRDDTILVSIMHVNNEIGVIQDIAAIGELCRARKILFHVDATQSVGKLPINLAELKVDLMSMSSHKLYGPKGIGALYVSRKPRVRLEAIIHGGGHERGMRSGTLPVHQIVGMGEAYRICKEEMASEMPRLKALRDRLYNGLKDIEETYVNGSMEHRLDSNLNISFNYVEGESLMMALRDIAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFTLGRYTTEEEIDYTIELVKNAVAKLRELSPLWDMFKEGIDLNTIEWTHH
>NZ_CP048402.1|WP_005721377.1|311988_312375_+|Fe-S-cluster-assembly-scaffold-IscU
MAYSNKVIDHYENPRNVGSLDKKDANVGTGMVGAPACGDVMQLQIKVSEEGIIEDAKFKTYGCGSAIASSSLITEWVKGKSLDEAQAIKNSQIAEELELPPVKVHCSILAEDAIKAAIADYKAKKEAK
>NZ_CP048402.1|WP_005721379.1|312444_312768_+|iron-sulfur-cluster-assembly-protein-IscA
MGISLTETAADRVRTFLANRGKGIGLRLGIKTSGCSGLAYVLEFVDELNPEDQVFEQHGVKIIVDAKSLVYLDGTELDFAKEGLNEGFKFNNPNVKDQCGCGESFHV

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Crispr_ID: NZ_CP048402_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048402_4

1542776-1545680

Unclear

I-F

Consensus_repeat	Method
TTTCTAAGCTGCCTATACGGCAGTTAAC	CRISPRCasFinder
TTTCTAAGCTGCCTATACGGCAGTTAAC	CRT
TTTCTAAGCTGCCTATACGGCAGTTAACT	PILER-CR
TTTCTAAGCTGCCTATACGGCAGTTAAC	PILER-CR

48 spacers

cas3

The CRISPR arrays of NZ_CP048402_4

>merge|NZ_CP048402|4|1542776-1545680|CRISPRCasFinder,CRT,PILER-CR,PILER-CR
AATTGAAACTGCCTATACGGCAGTTAACGAAATAACGCTTGAGAAAATCAATAACAGACTTTTCTAAGCTGCCTACACGGCAGTTAACTCTTGAAAGCAACAGCAGACAAACTAGCACGCTTTCTAAGCTGCCTATACGGCAGTTAACCAAGTCATCTTTTGAATAATGTCTTGGTCTTTTTTCTAAGCTGCCTATACGGCAGTTAACTCTTTGACATGCGTGCGAGTGAACTCACGCACTTTCTAAGCTGCCTATACGGCAGTTAACTATTCCTTATTCATCTTTAATTTCCGAAAATGTTTCTAAGCTGCCTATACGGCAGTTAACTTGCAGTAATTACGATTGCGGTAATGATTGCATTTCTAAGCTGCCTATACGGCAGTTAACGTAAACTGTTTATTTAAGCTATTTTTAGGAAATTTCTAAGCTGCCTATACGGCAGTTAACTTTTACTGCGTAATGACAATTTGAAAATTTCATTTCTAAGCTGCCTATACGGCAGTTAACATGTAAAAGGTGAGTTGCCGATGAAACAGAATTTTTCTAAGCTGCCTATACGGCAGTTAACCCTGACGATGCTAATGCAGTAATGTTTTGGAATTTCTAAGCTGCCTATACGGCAGTTAACCAACAGGAATACTTGGACACACTTGCGCTACGTTTCTAAGCTGCCTATACGGCAGTTAACTATTGACTTCTTCATTTGCGTTCATGATTCTTTTTCTAAGCTGCCTATACGGCAGTTAACTTGATTTATCTCATTTTCAGTTGCTGGCCCTATTTCTAAGCTGCCTATACGGCAGTTAACTCAGAATGTCAGCACGGTCTAAAACAGGTGTCTTTCTAAGCTGCCTATACGGCAGTTAACATTGCCAAACTTGCCGAACATTACAAGCAGGTTTTCTAAGCTGCCTATACGGCAGTTAACACGGGGGTACCCTTACTTAAATTGAGGTGGGTTTTCTAAGCTGCCTATACGGCAGTTAACGTGGTCGCTCAGAATTGTCCTGAGTTCACTGCTTTCTAAGCTGCCTATACGGCAGTTAACATAAAAAACAACGCTATGAAAAAGGCTATGATTTTCTAAGCTGCCTATACGGCAGTTAACGTCATGAAAGTTTATATAACTTAACACCTATTTTTCTAAGCTGCCTATACGGCAGTTAACCGGTGTTAAATAAAATGTGAGAATTTCGACATTTTCTAAGCTGCCTATACGGCAGTTAACTTTCTTCTAAAATATTAAAATTCAAAATCAAATTTCTAAGCTGCCTATACGGCAGTTAACTTTCGAAATCACGCCCGATTTTTTCACCTATTTTTCTAAGCTGCCTATACGGCAGTTAACGTGTTGTTGTGAAGATTGTTGTAAAATGAAGATTTCTAAGCTGCCTATACGGCAGTTAACAAAATAGAAACAAAAAGCGCCCATTTGTTTCTAAGCTGCCTATACGGCAGTTAACACTTTGTAATGGCTTCTGTAAGCACAACAGACTTTCTAAGCTGCCTATACGGCAGTTAACCGATTATAGAAACAAGAGAAGGGGTAACGCAATTTCTAAGCTGCCTATACGGCAGTTAACAGATGTGCATTCCGCTATTAAGCCACTTATCTTTTCTAAGCTGCCTATACGGCAGTTAACATTTTTTCCAATCACTTGCTCCAATTAGCTTTTTTCTAAGCTGCCTATACGGCAGTTAACACGGGGGTACCCTTACTTAAATTGAGGTGGGTTTTCTAAGCTGCCTATACGGCAGTTAACTGATTTGCATGAAAAAAATAACGATTTCTAGCTTTCTAAGCTGCCTATACGGCAGTTAACTACGGCTTGTACAGATATAGAAATTTGTGACTTTTCTAAGCTGCCTATACGGCAGTTAACACGGTTTAATACACTCATTAAGACAGCTCAAATTTCTAAGCTGCCTATACGGCAGTTAACTAATTCCCGCACTTGATCCGCCACATCCAGCGTTTCTAAGCTGCCTATACGGCAGTTAACCAGGTGTTACCATGAGAATGTGCACTCCCTCATTTCTAAGCTGCCTATACGGCAGTTAACTCCACCCATTTGAGTAACCGACATCCGGAATATTTCTAAGCTGCCTATACGGCAGTTAACGTCGCTGACCCCGATACCTACGCAGAACACTTTTTCTAAGCTGCCTATACGGCAGTTAACTGTCTGTTTGTGGTTCGCCTTGTGGAATATCATTTCTAAGCTGCCTATACGGCAGTTAACTAAAATTGACACAAGAACAATTAGGGGCAATTTTTCTAAGCTGCCTATACGGCAGTTAACGTTTGCACTTATCTACTGCACTATCATTTGCCTTTCTAAGCTGCCTATACGGCAGTTAACAGTGATGCAGAGCTTGCCTTTATTAAACCAACTTTCTAAGCTGCCTATACGGCAGTTAACAGCCGCTTCTACTTGACCGACGTGTGCATAAATTTCTAAGCTGCCTATACGGCAGTTAACCACATGCGAGAGCTTCAAAGAGTATTTTGGGTCTTTCTAAGCTGCCTATACGGCAGTTAACGTGCAGCAAGTGCATTTCTAGGCGGTCCATTGTTTCTAAGCTGCCTATACGGCAGTTAACGCTTTGCTGTTGATAAATATCTTGCATTGTTATTTCTAAGCTGCCTATACGGCAGTTAACAAAAGCTGGGTGAGGATTGAAGAAGAAAGTGCTTTCTAAGCTGCCTATACGGCAGTTAACCTTCACGATTGCCAAATGGACGTTTTAAAAACTTTCTAAGCTGCCTATACGGCAGTTAACTTTTAATACTAAACCGCCCGCCTGTGATTTCATTTCTAAGCTGCCTATACGGCAGTTAACGGCGTGATTACACCACAAAAGGATACTTAATCTTTCTAAGCTGCCTATACGGCAGTTAAC

>NZ_CP048402|4|4|1542776-1545680|CRISPRCasFinder
AATTGAAACTGCCTATACGGCAGTTAAC	GAAATAACGCTTGAGAAAATCAATAACAGACT
TTTCTAAGCTGCCTACACGGCAGTTAAC	TCTTGAAAGCAACAGCAGACAAACTAGCACGC
TTTCTAAGCTGCCTATACGGCAGTTAAC	CAAGTCATCTTTTGAATAATGTCTTGGTCTTT
TTTCTAAGCTGCCTATACGGCAGTTAAC	TCTTTGACATGCGTGCGAGTGAACTCACGCAC
TTTCTAAGCTGCCTATACGGCAGTTAAC	TATTCCTTATTCATCTTTAATTTCCGAAAATG
TTTCTAAGCTGCCTATACGGCAGTTAAC	TTGCAGTAATTACGATTGCGGTAATGATTGCA
TTTCTAAGCTGCCTATACGGCAGTTAAC	GTAAACTGTTTATTTAAGCTATTTTTAGGAAA
TTTCTAAGCTGCCTATACGGCAGTTAAC	TTTTACTGCGTAATGACAATTTGAAAATTTCA
TTTCTAAGCTGCCTATACGGCAGTTAAC	ATGTAAAAGGTGAGTTGCCGATGAAACAGAATT
TTTCTAAGCTGCCTATACGGCAGTTAAC	CCTGACGATGCTAATGCAGTAATGTTTTGGAA
TTTCTAAGCTGCCTATACGGCAGTTAAC	CAACAGGAATACTTGGACACACTTGCGCTACG
TTTCTAAGCTGCCTATACGGCAGTTAAC	TATTGACTTCTTCATTTGCGTTCATGATTCTT
TTTCTAAGCTGCCTATACGGCAGTTAAC	TTGATTTATCTCATTTTCAGTTGCTGGCCCTA
TTTCTAAGCTGCCTATACGGCAGTTAAC	TCAGAATGTCAGCACGGTCTAAAACAGGTGTC
TTTCTAAGCTGCCTATACGGCAGTTAAC	ATTGCCAAACTTGCCGAACATTACAAGCAGGT
TTTCTAAGCTGCCTATACGGCAGTTAAC	ACGGGGGTACCCTTACTTAAATTGAGGTGGGT
TTTCTAAGCTGCCTATACGGCAGTTAAC	GTGGTCGCTCAGAATTGTCCTGAGTTCACTGC
TTTCTAAGCTGCCTATACGGCAGTTAAC	ATAAAAAACAACGCTATGAAAAAGGCTATGAT
TTTCTAAGCTGCCTATACGGCAGTTAAC	GTCATGAAAGTTTATATAACTTAACACCTATT
TTTCTAAGCTGCCTATACGGCAGTTAAC	CGGTGTTAAATAAAATGTGAGAATTTCGACAT
TTTCTAAGCTGCCTATACGGCAGTTAAC	TTTCTTCTAAAATATTAAAATTCAAAATCAAA
TTTCTAAGCTGCCTATACGGCAGTTAAC	TTTCGAAATCACGCCCGATTTTTTCACCTATT
TTTCTAAGCTGCCTATACGGCAGTTAAC	GTGTTGTTGTGAAGATTGTTGTAAAATGAAGA
TTTCTAAGCTGCCTATACGGCAGTTAAC	AAAATAGAAACAAAAAGCGCCCATTTG
TTTCTAAGCTGCCTATACGGCAGTTAAC	ACTTTGTAATGGCTTCTGTAAGCACAACAGAC
TTTCTAAGCTGCCTATACGGCAGTTAAC	CGATTATAGAAACAAGAGAAGGGGTAACGCAA
TTTCTAAGCTGCCTATACGGCAGTTAAC	AGATGTGCATTCCGCTATTAAGCCACTTATCT
TTTCTAAGCTGCCTATACGGCAGTTAAC	ATTTTTTCCAATCACTTGCTCCAATTAGCTTT
TTTCTAAGCTGCCTATACGGCAGTTAAC	ACGGGGGTACCCTTACTTAAATTGAGGTGGGT
TTTCTAAGCTGCCTATACGGCAGTTAAC	TGATTTGCATGAAAAAAATAACGATTTCTAGC
TTTCTAAGCTGCCTATACGGCAGTTAAC	TACGGCTTGTACAGATATAGAAATTTGTGACT
TTTCTAAGCTGCCTATACGGCAGTTAAC	ACGGTTTAATACACTCATTAAGACAGCTCAAA
TTTCTAAGCTGCCTATACGGCAGTTAAC	TAATTCCCGCACTTGATCCGCCACATCCAGCG
TTTCTAAGCTGCCTATACGGCAGTTAAC	CAGGTGTTACCATGAGAATGTGCACTCCCTCA
TTTCTAAGCTGCCTATACGGCAGTTAAC	TCCACCCATTTGAGTAACCGACATCCGGAATA
TTTCTAAGCTGCCTATACGGCAGTTAAC	GTCGCTGACCCCGATACCTACGCAGAACACTT
TTTCTAAGCTGCCTATACGGCAGTTAAC	TGTCTGTTTGTGGTTCGCCTTGTGGAATATCA
TTTCTAAGCTGCCTATACGGCAGTTAAC	TAAAATTGACACAAGAACAATTAGGGGCAATT
TTTCTAAGCTGCCTATACGGCAGTTAAC	GTTTGCACTTATCTACTGCACTATCATTTGCC
TTTCTAAGCTGCCTATACGGCAGTTAAC	AGTGATGCAGAGCTTGCCTTTATTAAACCAAC
TTTCTAAGCTGCCTATACGGCAGTTAAC	AGCCGCTTCTACTTGACCGACGTGTGCATAAA
TTTCTAAGCTGCCTATACGGCAGTTAAC	CACATGCGAGAGCTTCAAAGAGTATTTTGGGTC
TTTCTAAGCTGCCTATACGGCAGTTAAC	GTGCAGCAAGTGCATTTCTAGGCGGTCCATTG
TTTCTAAGCTGCCTATACGGCAGTTAAC	GCTTTGCTGTTGATAAATATCTTGCATTGTTA
TTTCTAAGCTGCCTATACGGCAGTTAAC	AAAAGCTGGGTGAGGATTGAAGAAGAAAGTGC
TTTCTAAGCTGCCTATACGGCAGTTAAC	CTTCACGATTGCCAAATGGACGTTTTAAAAAC
TTTCTAAGCTGCCTATACGGCAGTTAAC	TTTTAATACTAAACCGCCCGCCTGTGATTTCA
TTTCTAAGCTGCCTATACGGCAGTTAAC	GGCGTGATTACACCACAAAAGGATACTTAATC
TTTCTAAGCTGCCTATACGGCAGTTAAC

>NZ_CP048402|4|3|1542776-1545680|CRT
AATTGAAACTGCCTATACGGCAGTTAAC	GAAATAACGCTTGAGAAAATCAATAACAGACT
TTTCTAAGCTGCCTACACGGCAGTTAAC	TCTTGAAAGCAACAGCAGACAAACTAGCACGC
TTTCTAAGCTGCCTATACGGCAGTTAAC	CAAGTCATCTTTTGAATAATGTCTTGGTCTTT
TTTCTAAGCTGCCTATACGGCAGTTAAC	TCTTTGACATGCGTGCGAGTGAACTCACGCAC
TTTCTAAGCTGCCTATACGGCAGTTAAC	TATTCCTTATTCATCTTTAATTTCCGAAAATG
TTTCTAAGCTGCCTATACGGCAGTTAAC	TTGCAGTAATTACGATTGCGGTAATGATTGCA
TTTCTAAGCTGCCTATACGGCAGTTAAC	GTAAACTGTTTATTTAAGCTATTTTTAGGAAA
TTTCTAAGCTGCCTATACGGCAGTTAAC	TTTTACTGCGTAATGACAATTTGAAAATTTCA
TTTCTAAGCTGCCTATACGGCAGTTAAC	ATGTAAAAGGTGAGTTGCCGATGAAACAGAATT
TTTCTAAGCTGCCTATACGGCAGTTAAC	CCTGACGATGCTAATGCAGTAATGTTTTGGAA
TTTCTAAGCTGCCTATACGGCAGTTAAC	CAACAGGAATACTTGGACACACTTGCGCTACG
TTTCTAAGCTGCCTATACGGCAGTTAAC	TATTGACTTCTTCATTTGCGTTCATGATTCTT
TTTCTAAGCTGCCTATACGGCAGTTAAC	TTGATTTATCTCATTTTCAGTTGCTGGCCCTA
TTTCTAAGCTGCCTATACGGCAGTTAAC	TCAGAATGTCAGCACGGTCTAAAACAGGTGTC
TTTCTAAGCTGCCTATACGGCAGTTAAC	ATTGCCAAACTTGCCGAACATTACAAGCAGGT
TTTCTAAGCTGCCTATACGGCAGTTAAC	ACGGGGGTACCCTTACTTAAATTGAGGTGGGT
TTTCTAAGCTGCCTATACGGCAGTTAAC	GTGGTCGCTCAGAATTGTCCTGAGTTCACTGC
TTTCTAAGCTGCCTATACGGCAGTTAAC	ATAAAAAACAACGCTATGAAAAAGGCTATGAT
TTTCTAAGCTGCCTATACGGCAGTTAAC	GTCATGAAAGTTTATATAACTTAACACCTATT
TTTCTAAGCTGCCTATACGGCAGTTAAC	CGGTGTTAAATAAAATGTGAGAATTTCGACAT
TTTCTAAGCTGCCTATACGGCAGTTAAC	TTTCTTCTAAAATATTAAAATTCAAAATCAAA
TTTCTAAGCTGCCTATACGGCAGTTAAC	TTTCGAAATCACGCCCGATTTTTTCACCTATT
TTTCTAAGCTGCCTATACGGCAGTTAAC	GTGTTGTTGTGAAGATTGTTGTAAAATGAAGA
TTTCTAAGCTGCCTATACGGCAGTTAAC	AAAATAGAAACAAAAAGCGCCCATTTG
TTTCTAAGCTGCCTATACGGCAGTTAAC	ACTTTGTAATGGCTTCTGTAAGCACAACAGAC
TTTCTAAGCTGCCTATACGGCAGTTAAC	CGATTATAGAAACAAGAGAAGGGGTAACGCAA
TTTCTAAGCTGCCTATACGGCAGTTAAC	AGATGTGCATTCCGCTATTAAGCCACTTATCT
TTTCTAAGCTGCCTATACGGCAGTTAAC	ATTTTTTCCAATCACTTGCTCCAATTAGCTTT
TTTCTAAGCTGCCTATACGGCAGTTAAC	ACGGGGGTACCCTTACTTAAATTGAGGTGGGT
TTTCTAAGCTGCCTATACGGCAGTTAAC	TGATTTGCATGAAAAAAATAACGATTTCTAGC
TTTCTAAGCTGCCTATACGGCAGTTAAC	TACGGCTTGTACAGATATAGAAATTTGTGACT
TTTCTAAGCTGCCTATACGGCAGTTAAC	ACGGTTTAATACACTCATTAAGACAGCTCAAA
TTTCTAAGCTGCCTATACGGCAGTTAAC	TAATTCCCGCACTTGATCCGCCACATCCAGCG
TTTCTAAGCTGCCTATACGGCAGTTAAC	CAGGTGTTACCATGAGAATGTGCACTCCCTCA
TTTCTAAGCTGCCTATACGGCAGTTAAC	TCCACCCATTTGAGTAACCGACATCCGGAATA
TTTCTAAGCTGCCTATACGGCAGTTAAC	GTCGCTGACCCCGATACCTACGCAGAACACTT
TTTCTAAGCTGCCTATACGGCAGTTAAC	TGTCTGTTTGTGGTTCGCCTTGTGGAATATCA
TTTCTAAGCTGCCTATACGGCAGTTAAC	TAAAATTGACACAAGAACAATTAGGGGCAATT
TTTCTAAGCTGCCTATACGGCAGTTAAC	GTTTGCACTTATCTACTGCACTATCATTTGCC
TTTCTAAGCTGCCTATACGGCAGTTAAC	AGTGATGCAGAGCTTGCCTTTATTAAACCAAC
TTTCTAAGCTGCCTATACGGCAGTTAAC	AGCCGCTTCTACTTGACCGACGTGTGCATAAA
TTTCTAAGCTGCCTATACGGCAGTTAAC	CACATGCGAGAGCTTCAAAGAGTATTTTGGGTC
TTTCTAAGCTGCCTATACGGCAGTTAAC	GTGCAGCAAGTGCATTTCTAGGCGGTCCATTG
TTTCTAAGCTGCCTATACGGCAGTTAAC	GCTTTGCTGTTGATAAATATCTTGCATTGTTA
TTTCTAAGCTGCCTATACGGCAGTTAAC	AAAAGCTGGGTGAGGATTGAAGAAGAAAGTGC
TTTCTAAGCTGCCTATACGGCAGTTAAC	CTTCACGATTGCCAAATGGACGTTTTAAAAAC
TTTCTAAGCTGCCTATACGGCAGTTAAC	TTTTAATACTAAACCGCCCGCCTGTGATTTCA
TTTCTAAGCTGCCTATACGGCAGTTAAC	GGCGTGATTACACCACAAAAGGATACTTAATC
TTTCTAAGCTGCCTATACGGCAGTTAAC

>NZ_CP048402|4|3|1542836-1543104|PILER-CR
TTTCTAAGCTGCCTACACGGCAGTTAACT	CTTGAAAGCAACAGCAGACAAACTAGCACGC
TTTCTAAGCTGCCTATACGGCAGTTAACC	AAGTCATCTTTTGAATAATGTCTTGGTCTTT
TTTCTAAGCTGCCTATACGGCAGTTAACT	CTTTGACATGCGTGCGAGTGAACTCACGCAC
TTTCTAAGCTGCCTATACGGCAGTTAACT	ATTCCTTATTCATCTTTAATTTCCGAAAATG
TTTCTAAGCTGCCTATACGGCAGTTAACTTGCAGTAATTACGATTGCGGTAATGATTGCATTTCTAAGCTGCCTATACGGCAGTTAACGTAAACTGTTTATTTAAGCTATTTTTAGGAAATTTCTAAGCTGCCTATACGGCAGTTAAC	TTTTACTGCGTAATGACAATTTGAAAATTTCA
TTTCTAAGCTGCCTATACGGCAGTTAAC	ATGTAAAAGGTGAGTTGCCGATGAAACAGAATT
TTTCTAAGCTGCCTATACGGCAGTTAAC	CCTGACGATGCTAATGCAGTAATGTTTTGGAA
TTTCTAAGCTGCCTATACGGCAGTTAAC	CAACAGGAATACTTGGACACACTTGCGCTACG
TTTCTAAGCTGCCTATACGGCAGTTAAC	TATTGACTTCTTCATTTGCGTTCATGATTCTT
TTTCTAAGCTGCCTATACGGCAGTTAAC	TTGATTTATCTCATTTTCAGTTGCTGGCCCTA
TTTCTAAGCTGCCTATACGGCAGTTAAC	TCAGAATGTCAGCACGGTCTAAAACAGGTGTC
TTTCTAAGCTGCCTATACGGCAGTTAAC	ATTGCCAAACTTGCCGAACATTACAAGCAGGT
TTTCTAAGCTGCCTATACGGCAGTTAAC	ACGGGGGTACCCTTACTTAAATTGAGGTGGGT
TTTCTAAGCTGCCTATACGGCAGTTAAC	GTGGTCGCTCAGAATTGTCCTGAGTTCACTGC
TTTCTAAGCTGCCTATACGGCAGTTAAC	ATAAAAAACAACGCTATGAAAAAGGCTATGAT
TTTCTAAGCTGCCTATACGGCAGTTAAC	GTCATGAAAGTTTATATAACTTAACACCTATT
TTTCTAAGCTGCCTATACGGCAGTTAAC	CGGTGTTAAATAAAATGTGAGAATTTCGACAT
TTTCTAAGCTGCCTATACGGCAGTTAAC	TTTCTTCTAAAATATTAAAATTCAAAATCAAA
TTTCTAAGCTGCCTATACGGCAGTTAAC	TTTCGAAATCACGCCCGATTTTTTCACCTATT
TTTCTAAGCTGCCTATACGGCAGTTAAC	GTGTTGTTGTGAAGATTGTTGTAAAATGAAGA
TTTCTAAGCTGCCTATACGGCAGTTAAC	AAAATAGAAACAAAAAGCGCCCATTTG
TTTCTAAGCTGCCTATACGGCAGTTAAC	ACTTTGTAATGGCTTCTGTAAGCACAACAGAC
TTTCTAAGCTGCCTATACGGCAGTTAAC	CGATTATAGAAACAAGAGAAGGGGTAACGCAA
TTTCTAAGCTGCCTATACGGCAGTTAAC	AGATGTGCATTCCGCTATTAAGCCACTTATCT
TTTCTAAGCTGCCTATACGGCAGTTAAC	ATTTTTTCCAATCACTTGCTCCAATTAGCTTT
TTTCTAAGCTGCCTATACGGCAGTTAAC	ACGGGGGTACCCTTACTTAAATTGAGGTGGGT
TTTCTAAGCTGCCTATACGGCAGTTAAC	TGATTTGCATGAAAAAAATAACGATTTCTAGC
TTTCTAAGCTGCCTATACGGCAGTTAAC	TACGGCTTGTACAGATATAGAAATTTGTGACT
TTTCTAAGCTGCCTATACGGCAGTTAAC	ACGGTTTAATACACTCATTAAGACAGCTCAAA
TTTCTAAGCTGCCTATACGGCAGTTAAC	TAATTCCCGCACTTGATCCGCCACATCCAGCG
TTTCTAAGCTGCCTATACGGCAGTTAAC	CAGGTGTTACCATGAGAATGTGCACTCCCTCA
TTTCTAAGCTGCCTATACGGCAGTTAAC	TCCACCCATTTGAGTAACCGACATCCGGAATA
TTTCTAAGCTGCCTATACGGCAGTTAAC	GTCGCTGACCCCGATACCTACGCAGAACACTT
TTTCTAAGCTGCCTATACGGCAGTTAAC	TGTCTGTTTGTGGTTCGCCTTGTGGAATATCA
TTTCTAAGCTGCCTATACGGCAGTTAAC	TAAAATTGACACAAGAACAATTAGGGGCAATT
TTTCTAAGCTGCCTATACGGCAGTTAAC	GTTTGCACTTATCTACTGCACTATCATTTGCC
TTTCTAAGCTGCCTATACGGCAGTTAAC	AGTGATGCAGAGCTTGCCTTTATTAAACCAAC
TTTCTAAGCTGCCTATACGGCAGTTAAC	AGCCGCTTCTACTTGACCGACGTGTGCATAAA
TTTCTAAGCTGCCTATACGGCAGTTAAC	CACATGCGAGAGCTTCAAAGAGTATTTTGGGTC
TTTCTAAGCTGCCTATACGGCAGTTAAC	GTGCAGCAAGTGCATTTCTAGGCGGTCCATTG
TTTCTAAGCTGCCTATACGGCAGTTAAC	GCTTTGCTGTTGATAAATATCTTGCATTGTTA
TTTCTAAGCTGCCTATACGGCAGTTAAC	AAAAGCTGGGTGAGGATTGAAGAAGAAAGTGC
TTTCTAAGCTGCCTATACGGCAGTTAAC	CTTCACGATTGCCAAATGGACGTTTTAAAAAC
TTTCTAAGCTGCCTATACGGCAGTTAAC	TTTTAATACTAAACCGCCCGCCTGTGATTTCA
TTTCTAAGCTGCCTATACGGCAGTTAAC	GGCGTGATTACACCACAAAAGGATACTTAATC


>NZ_CP048402|4|4|1543196-1545680|PILER-CR
	CTTGAAAGCAACAGCAGACAAACTAGCACGC
TTTCTAAGCTGCCTATACGGCAGTTAACC	AAGTCATCTTTTGAATAATGTCTTGGTCTTT
TTTCTAAGCTGCCTATACGGCAGTTAACT	CTTTGACATGCGTGCGAGTGAACTCACGCAC
TTTCTAAGCTGCCTATACGGCAGTTAACT	ATTCCTTATTCATCTTTAATTTCCGAAAATG
TTTCTAAGCTGCCTATACGGCAGTTAACTTGCAGTAATTACGATTGCGGTAATGATTGCATTTCTAAGCTGCCTATACGGCAGTTAACGTAAACTGTTTATTTAAGCTATTTTTAGGAAATTTCTAAGCTGCCTATACGGCAGTTAAC	TTTTACTGCGTAATGACAATTTGAAAATTTCA
TTTCTAAGCTGCCTATACGGCAGTTAAC	ATGTAAAAGGTGAGTTGCCGATGAAACAGAATT
TTTCTAAGCTGCCTATACGGCAGTTAAC	CCTGACGATGCTAATGCAGTAATGTTTTGGAA
TTTCTAAGCTGCCTATACGGCAGTTAAC	CAACAGGAATACTTGGACACACTTGCGCTACG
TTTCTAAGCTGCCTATACGGCAGTTAAC	TATTGACTTCTTCATTTGCGTTCATGATTCTT
TTTCTAAGCTGCCTATACGGCAGTTAAC	TTGATTTATCTCATTTTCAGTTGCTGGCCCTA
TTTCTAAGCTGCCTATACGGCAGTTAAC	TCAGAATGTCAGCACGGTCTAAAACAGGTGTC
TTTCTAAGCTGCCTATACGGCAGTTAAC	ATTGCCAAACTTGCCGAACATTACAAGCAGGT
TTTCTAAGCTGCCTATACGGCAGTTAAC	ACGGGGGTACCCTTACTTAAATTGAGGTGGGT
TTTCTAAGCTGCCTATACGGCAGTTAAC	GTGGTCGCTCAGAATTGTCCTGAGTTCACTGC
TTTCTAAGCTGCCTATACGGCAGTTAAC	ATAAAAAACAACGCTATGAAAAAGGCTATGAT
TTTCTAAGCTGCCTATACGGCAGTTAAC	GTCATGAAAGTTTATATAACTTAACACCTATT
TTTCTAAGCTGCCTATACGGCAGTTAAC	CGGTGTTAAATAAAATGTGAGAATTTCGACAT
TTTCTAAGCTGCCTATACGGCAGTTAAC	TTTCTTCTAAAATATTAAAATTCAAAATCAAA
TTTCTAAGCTGCCTATACGGCAGTTAAC	TTTCGAAATCACGCCCGATTTTTTCACCTATT
TTTCTAAGCTGCCTATACGGCAGTTAAC	GTGTTGTTGTGAAGATTGTTGTAAAATGAAGA
TTTCTAAGCTGCCTATACGGCAGTTAAC	AAAATAGAAACAAAAAGCGCCCATTTG
TTTCTAAGCTGCCTATACGGCAGTTAAC	ACTTTGTAATGGCTTCTGTAAGCACAACAGAC
TTTCTAAGCTGCCTATACGGCAGTTAAC	CGATTATAGAAACAAGAGAAGGGGTAACGCAA
TTTCTAAGCTGCCTATACGGCAGTTAAC	AGATGTGCATTCCGCTATTAAGCCACTTATCT
TTTCTAAGCTGCCTATACGGCAGTTAAC	ATTTTTTCCAATCACTTGCTCCAATTAGCTTT
TTTCTAAGCTGCCTATACGGCAGTTAAC	ACGGGGGTACCCTTACTTAAATTGAGGTGGGT
TTTCTAAGCTGCCTATACGGCAGTTAAC	TGATTTGCATGAAAAAAATAACGATTTCTAGC
TTTCTAAGCTGCCTATACGGCAGTTAAC	TACGGCTTGTACAGATATAGAAATTTGTGACT
TTTCTAAGCTGCCTATACGGCAGTTAAC	ACGGTTTAATACACTCATTAAGACAGCTCAAA
TTTCTAAGCTGCCTATACGGCAGTTAAC	TAATTCCCGCACTTGATCCGCCACATCCAGCG
TTTCTAAGCTGCCTATACGGCAGTTAAC	CAGGTGTTACCATGAGAATGTGCACTCCCTCA
TTTCTAAGCTGCCTATACGGCAGTTAAC	TCCACCCATTTGAGTAACCGACATCCGGAATA
TTTCTAAGCTGCCTATACGGCAGTTAAC	GTCGCTGACCCCGATACCTACGCAGAACACTT
TTTCTAAGCTGCCTATACGGCAGTTAAC	TGTCTGTTTGTGGTTCGCCTTGTGGAATATCA
TTTCTAAGCTGCCTATACGGCAGTTAAC	TAAAATTGACACAAGAACAATTAGGGGCAATT
TTTCTAAGCTGCCTATACGGCAGTTAAC	GTTTGCACTTATCTACTGCACTATCATTTGCC
TTTCTAAGCTGCCTATACGGCAGTTAAC	AGTGATGCAGAGCTTGCCTTTATTAAACCAAC
TTTCTAAGCTGCCTATACGGCAGTTAAC	AGCCGCTTCTACTTGACCGACGTGTGCATAAA
TTTCTAAGCTGCCTATACGGCAGTTAAC	CACATGCGAGAGCTTCAAAGAGTATTTTGGGTC
TTTCTAAGCTGCCTATACGGCAGTTAAC	GTGCAGCAAGTGCATTTCTAGGCGGTCCATTG
TTTCTAAGCTGCCTATACGGCAGTTAAC	GCTTTGCTGTTGATAAATATCTTGCATTGTTA
TTTCTAAGCTGCCTATACGGCAGTTAAC	AAAAGCTGGGTGAGGATTGAAGAAGAAAGTGC
TTTCTAAGCTGCCTATACGGCAGTTAAC	CTTCACGATTGCCAAATGGACGTTTTAAAAAC
TTTCTAAGCTGCCTATACGGCAGTTAAC	TTTTAATACTAAACCGCCCGCCTGTGATTTCA
TTTCTAAGCTGCCTATACGGCAGTTAAC	GGCGTGATTACACCACAAAAGGATACTTAATC
TTTCTAAGCTGCCTATACGGCAGTTAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048402.1\|WP_064968757.1\|1540715_1541762_+\|lipopolysaccharide-heptosyltransferase-II	unknown	unknown	gnl\|CDD\|182835
NZ_CP048402.1\|WP_163884135.1\|1549009_1551913_+\|RNA-polymerase-associated-protein-RapA	unknown	unknown	gnl\|CDD\|235319
NZ_CP048402.1\|WP_163884134.1\|1541758_1542724_+\|lipopolysaccharide-heptosyltransferase-RfaC	unknown	unknown	gnl\|CDD\|236809
NZ_CP048402.1\|WP_163884132.1\|1530882_1532469_-\|L-lactate-permease	unknown	unknown	gnl\|CDD\|224535
NZ_CP048402.1\|WP_005724867.1\|1548029_1548734_-\|nicotinamide-riboside-transporter-PnuC	unknown	unknown	gnl\|CDD\|225742
NZ_CP048402.1\|WP_005752888.1\|1555915_1556251_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP048402.1\|WP_005724893.1\|1540239_1540647_+\|copper-chaperone-PCu(A)C	unknown	unknown	gnl\|CDD\|225403
NZ_CP048402.1\|WP_005755466.1\|1552716_1553286_+\|Der-GTPase-activating-protein-YihI	unknown	unknown	gnl\|CDD\|367878
NZ_CP048402.1\|WP_046333968.1\|1535019_1535946_+\|aminoimidazole-riboside-kinase	unknown	unknown	gnl\|CDD\|236514
NZ_CP048402.1\|WP_163884136.1\|1551993_1552653_+\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	unknown	unknown	gnl\|CDD\|236659
NZ_CP048402.1\|WP_064972641.1\|1545828_1547157_-\|ATP-dependent-RNA-helicase-SrmB	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|236877
NZ_CP048402.1\|WP_005758063.1\|1534222_1534834_-\|high-frequency-lysogenization-protein-HflD	unknown	unknown	gnl\|CDD\|225467
NZ_CP048402.1\|WP_163884138.1\|1555151_1555820_+\|NAD(P)H-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|380324
NZ_CP048402.1\|WP_005752327.1\|1538699_1540124_+\|PTS-sucrose-transporter-subunit-IIBC	unknown	unknown	gnl\|CDD\|131051
NZ_CP048402.1\|WP_005724897.1\|1537451_1538471_+\|substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|131470
NZ_CP048402.1\|WP_014326415.1\|1547268_1547982_+\|tRNA1(Val)-(adenine(37)-N6)-methyltransferase	unknown	unknown	gnl\|CDD\|226608
NZ_CP048402.1\|WP_163884137.1\|1553743_1555111_+\|oxygen-independent-coproporphyrinogen-III-oxidase	unknown	unknown	gnl\|CDD\|236430
NZ_CP048402.1\|WP_163884133.1\|1535983_1537426_+\|glycoside-hydrolase-family-32-protein	unknown	unknown	gnl\|CDD\|224536
NZ_CP048402.1\|WP_005724851.1\|1553291_1553720_+\|DUF2489-domain-containing-protein	unknown	unknown	gnl\|CDD\|378470
NZ_CP048402.1\|WP_005724904.1\|1532827_1534195_-\|adenylosuccinate-lyase	unknown	unknown	gnl\|CDD\|236452

Protein	Function_ID	Function_description	E-value
NZ_CP048402.1\|WP_064968757.1\|1540715_1541762_+\|lipopolysaccharide-heptosyltransferase-II	gnl\|CDD\|182835	PRK10916, PRK10916, ADP-heptose--LPS heptosyltransferase RfaF.	0
NZ_CP048402.1\|WP_163884135.1\|1549009_1551913_+\|RNA-polymerase-associated-protein-RapA	gnl\|CDD\|235319	PRK04914, PRK04914, RNA polymerase-associated protein RapA.	0
NZ_CP048402.1\|WP_163884134.1\|1541758_1542724_+\|lipopolysaccharide-heptosyltransferase-RfaC	gnl\|CDD\|236809	PRK10964, PRK10964, lipopolysaccharide heptosyltransferase RfaC.	0
NZ_CP048402.1\|WP_163884132.1\|1530882_1532469_-\|L-lactate-permease	gnl\|CDD\|224535	COG1620, LldP, L-lactate permease [Energy production and conversion].	1.41169e-166
NZ_CP048402.1\|WP_005724867.1\|1548029_1548734_-\|nicotinamide-riboside-transporter-PnuC	gnl\|CDD\|225742	COG3201, PnuC, Nicotinamide mononucleotide transporter [Coenzyme metabolism].	5.27246e-73
NZ_CP048402.1\|WP_005752888.1\|1555915_1556251_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	1.65249e-05
NZ_CP048402.1\|WP_005724893.1\|1540239_1540647_+\|copper-chaperone-PCu(A)C	gnl\|CDD\|225403	COG2847, COG2847, Copper(I)-binding protein [Inorganic ion transport and metabolism].	6.75158e-43
NZ_CP048402.1\|WP_005755466.1\|1552716_1553286_+\|Der-GTPase-activating-protein-YihI	gnl\|CDD\|367878	pfam04220, YihI, Der GTPase activator (YihI). YihI activates the GTPase activity of Der, a 50S ribosomal subunit stability factor. The stimulation is specific to Der as YihI does not stimulate the GTPase activity of Era or ObgE. The interaction of YihI with Der requires only the C-terminal 78 amino acids of YihI. A yihI deletion mutant is viable and shows a shorter lag period, but the same post-lag growth rate as a wild-type strain. yihI is expressed during the lag period. Overexpression of yihI inhibits cell growth and biogenesis of the 50S ribosomal subunit. YihI is an unusual, highly hydrophilic protein with an uneven distribution of charged residues, resulting in an N-terminal region with high pI and a C-terminal region with low pI.	2.73744e-61
NZ_CP048402.1\|WP_046333968.1\|1535019_1535946_+\|aminoimidazole-riboside-kinase	gnl\|CDD\|236514	PRK09434, PRK09434, aminoimidazole riboside kinase; Provisional.	0
NZ_CP048402.1\|WP_163884136.1\|1551993_1552653_+\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	gnl\|CDD\|236659	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA.	1.81042e-101
NZ_CP048402.1\|WP_064972641.1\|1545828_1547157_-\|ATP-dependent-RNA-helicase-SrmB	gnl\|CDD\|236877	PRK11192, PRK11192, ATP-dependent RNA helicase SrmB; Provisional.	0
NZ_CP048402.1\|WP_005758063.1\|1534222_1534834_-\|high-frequency-lysogenization-protein-HflD	gnl\|CDD\|225467	COG2915, COG2915, Uncharacterized protein involved in purine metabolism [General function prediction only].	7.82111e-109
NZ_CP048402.1\|WP_163884138.1\|1555151_1555820_+\|NAD(P)H-dependent-oxidoreductase	gnl\|CDD\|380324	cd02149, NfsB-like, nitroreductase similar to Escherichia coli NfsB. NAD(P)H:FMN oxidoreductase family. This domain catalyzes the reduction of flavin, nitrocompound, quinones and azo compounds using NADH or NADPH as an electron donor. The enzyme is a homodimer, and each monomer binds a FMN as co-factor. This family includes FRase I in Vibrio fischeri, wihich reduces FMN into FMNH2 as part of the bioluminescent reaction. The family also includes oxygen-insensitive nitroreductases that use NADH or NADPH as an electron donor in the ping pong bi bi mechanism. This type of nitroreductase can be used in cancer chemotherapy to activate a range of prodrugs.	2.87033e-76
NZ_CP048402.1\|WP_005752327.1\|1538699_1540124_+\|PTS-sucrose-transporter-subunit-IIBC	gnl\|CDD\|131051	TIGR01996, Includes:_Phosphotransferase_enzyme_IIB_component, PTS system, sucrose-specific IIBC component. This model represents the fused enzyme II B and C components of the sucrose-specific PTS sugar transporter system. Sucrose is converted to sucrose-6-phosphate in the process of translocation into the cell. Some of these transporters lack their own IIA domains and instead use the glucose IIA protein (IIAglc or Crr). The exceptions to this rule are Staphylococci, Streptococci, Lactococci, Lactobacilli, etc. which contain their own A domain as a C-terminal fusion. This family is closely related to the trehalose transporting PTS IIBC enzymes and the B and C domains of each are described by subfamily-domain level TIGRFAMs models (TIGR00826 and TIGR00852, respectively).	0
NZ_CP048402.1\|WP_005724897.1\|1537451_1538471_+\|substrate-binding-domain-containing-protein	gnl\|CDD\|131470	TIGR02417, Fructose_repressor_Catabolite_repressor/activator., D-fructose-responsive transcription factor. Members of this family belong the lacI helix-turn-helix family (pfam00356) of DNA-binding transcriptional regulators. All members are from the proteobacteria. Characterized members act as positive and negative transcriptional regulators of fructose and sucrose transport and metabolism. Sucrose is a disaccharide composed of fructose and glucose; D-fructose-1-phosphate rather than an intact sucrose moiety has been shown to act as the inducer. [Regulatory functions, DNA interactions].	0
NZ_CP048402.1\|WP_014326415.1\|1547268_1547982_+\|tRNA1(Val)-(adenine(37)-N6)-methyltransferase	gnl\|CDD\|226608	COG4123, COG4123, Predicted O-methyltransferase [General function prediction only].	2.77606e-93
NZ_CP048402.1\|WP_163884137.1\|1553743_1555111_+\|oxygen-independent-coproporphyrinogen-III-oxidase	gnl\|CDD\|236430	PRK09249, PRK09249, coproporphyrinogen dehydrogenase.	0
NZ_CP048402.1\|WP_163884133.1\|1535983_1537426_+\|glycoside-hydrolase-family-32-protein	gnl\|CDD\|224536	COG1621, SacC, Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism].	5.54647e-175
NZ_CP048402.1\|WP_005724851.1\|1553291_1553720_+\|DUF2489-domain-containing-protein	gnl\|CDD\|378470	pfam10675, DUF2489, Protein of unknown function (DUF2489). This is a bacterial family of uncharacterized proteins.	8.47251e-49
NZ_CP048402.1\|WP_005724904.1\|1532827_1534195_-\|adenylosuccinate-lyase	gnl\|CDD\|236452	PRK09285, PRK09285, adenylosuccinate lyase; Provisional.	0

>NZ_CP048402.1|WP_163884134.1|1541758_1542724_+|lipopolysaccharide-heptosyltransferase-RfaC
MKICLIKTSSMGDILHSLPALTDAQRALPNLQVDWVVEESFAEIPHWHSAVRQVIPIALRRWRKTPFTALTRKQWKTYRTLLQSEQYDAVIDAQGLLKSALFATRLARGTRHGYDRHSIREPIAACFYDKKYAISYQQHAVERIRQLFAQSLNYPLPHTQGDYGIARHFPQHAQTMPYVLFFHGTTRQDKFLPDKQWRTLAEKLTAQGIQIHVPWSNPQEKQRAERIAQGLDLVTILPKSTLSELAQQIVNASAVVSVDTGLAHLSAALDKTNLTLYGATDPKLIGSYGKNQHYLVAESMDKIDADEIFQKLTALLSLNTI
>NZ_CP048402.1|WP_064968757.1|1540715_1541762_+|lipopolysaccharide-heptosyltransferase-II
MHILIIGPSWVGDMMMSHSLYQTLKQQYPQCEIDVMAPNWCKPLLERMPEVRQAITMPLGHGAFALGDRYRLGKALRHQYDMAIVLPNSLKSAFIPFFAKIPLRRGWKGESRYLFLNDLRSNKKDYPMMVQRYIALAFEKGAVPKAEDLPRPVPYLTVDPVTQQHTLKKFEKQTALISPRPSIGFCPGAEFGPAKRWPHYHYAKLAEMLIQQGYALRLFGSAKDEAVGEEIRQALPETMRHFCINLAGQTSLNEAVDLIADCTAIVTNDSGLMHIAAAVQRPLVALYGPTSPTYTPPLSEKAVIIRLIEGGLIKVRKGKDSDEGYHQSLIDIQPELVFDKLTGLLANT
>NZ_CP048402.1|WP_005724893.1|1540239_1540647_+|copper-chaperone-PCu(A)C
MKSLTQLLFILTALLPTSLFAHIHVEQAQMFSAKAGEPSAIFMNIHNTGNEDVSLALVQSDIRADIVLHGTQHGKMIEVTGINLPAHQMTALKRGGLHIMVFNVEQDLNVGDTFPLRLLFDNGEIMHIEAKIIQY
>NZ_CP048402.1|WP_005752327.1|1538699_1540124_+|PTS-sucrose-transporter-subunit-IIBC
MNFSQIAQQVIDKLGGKDNISAAAHCATRLRIVVKNENLIDKKGIENIEGVKGQFAVAGQYQIIFGSGTVNKVYAALSKLLGIGDMTTSEVAAAGTEKQGLLQRLVKGLADIFVPIIPAIVAGGLLMGIHSMLTAKGFFVEEKNVVDLYPAIADLVDFINTIANAPFVFLPVLLGFSATRKFGGNPFLGAALGMLLVHPALSDGWNYALTLAKGNIQYWHIFGLEIERVGYQGTVIPVLVASWVLATLEKNLRKVVPSFLDNLITPLFALFITGLLAFTVIGPIGREAGSLISTGLTWLYDTLGFVGGAIFGTLYAPIVITGMHQTFIAVETQLLAEVARTGGTFIFPIAAMSNIAQGAACLGAAYVMKDAKVRGIAVPSGISALLGITEPAMFGVNLRYRYPFISAMIGAGISSAVIALFNVKAIALGAAGLPGIPSIKPDSLAMYCVGMLISASIAFTLTVILGKRAQLKAE
>NZ_CP048402.1|WP_005724897.1|1537451_1538471_+|substrate-binding-domain-containing-protein
MSITNKKRITLSDIAKCCGLSTTTVSMILNNRGEEFKIKAETCQRVKAIAEQQGYRANVYAKSLKMQRSNVIGFVIPDLTNYGFACTAKILEKQCRENGLQLIIACSDDNPQQEKLAIERLLDRQIDFLITAPTHQDPSYYQKIGQHTPILQLDRYVPDLALNYVISNDSEHITTLICRLCDQYQLTEFMYFGGQRTLSPSESRLAGFLQGLKQANLNLKKEWILHRTYQPESGYQMLAETEAKLGRLPQAIFTASYTLLEGVLRYLTEQKKMDLLLNRQLHLATFDDHDILNALPFHIHSIKQNHPQLAQQIFQHIMRYFAGKKSPNQKIDCDVIYRD
>NZ_CP048402.1|WP_163884133.1|1535983_1537426_+|glycoside-hydrolase-family-32-protein
MYIFNQGKYKSLHAQEVGELAQIRQHVLRDTQFRPTYHLAPETGLLNDPNGLVFDGEKYHIFYQWFPYAAIHGMKHWKHFITYDFHHFQAADPLIPDELFESHGCYSGGALLWQDQIVAFYTGNTRNAENQRIPHQNIAIFKKDGTLLKKRCLLNQAPTGYTEHVRDPKPFITEEGKIRFILGAQREDLSGTALIYEMTDLDATPQLIGEFKLPDFDNQQVFMWECPDLLKLQEQDLFLWSPQGKAQKTYCFQNHYHATYALGQYANLHFSAQHIEELDYGFDFYAPQSIQGSEGIYYAWVGLPDLTYPTDEYQWHSMLSLPRQFSIQQGILYQRPIPQVYAQCLPTHKYWVEGKQQIPHLDRSYVAFDAENQPFTLRFFTNQRGQQLILRYQNGILTLDRTYTTQTALMQQFGEQRHCILPQLNHVEIFFDRSVVEIFLNQGEKVMTSRFFIADRENALDSSRPLCVSVAELKPIILTP
>NZ_CP048402.1|WP_046333968.1|1535019_1535946_+|aminoimidazole-riboside-kinase
MGKIWVLGDAVVDLILEGENTYLRCAGGAPANVAVGIARLGATTGFIGRVGDDPLGRFMLNKLQQENVCTQYMHLDPKQRTSTVIVDLKEGERSFTFMVNPSADQFLELSDLPHFNPNDWLHCCSIALINEPSRSSTFAAIHRIKAEGGFFSFDPNLRESLWNSPAEMKTVVNQVVALADVLKFSEEELLFLTDSDTLSDATAKLTQHYPDKLIIVTLGKLGATYYLQGKSQLISSKKALIPVDTTGAGDAFVSGLLFGISQVKNWQNPTALVEIIKQANACGALATTAKGAMSALPNKQQLDAFLAE
>NZ_CP048402.1|WP_005758063.1|1534222_1534834_-|high-frequency-lysogenization-protein-HflD
MANYYDITLALAGVCQAAKLVQQFAHEGQADQAALETSLNTLLQIYPEDTLAVFGGKAQNLKLGLETLLEQMHGTGSDLSRYWISLLALESKLNKDPHAKAELARRIQYLPTQLEHYDLLDEQMLSTLASIYVDVISPLGKKIQVTGSTLYLQQLAMHHRIRACLLAGIRSAVLWRQVGGTKWQVLFSRRKIIAMAKQIYSSL
>NZ_CP048402.1|WP_005724904.1|1532827_1534195_-|adenylosuccinate-lyase
MQLNALTALSPIDGRYQDKVSSLRSIFSEFGLLKFRVTVEVRWLQKLAATDQIQEVSLLSQEANDYLNHIVENFSVQDAERIKEIERTTNHDVKAVEYFLKEKSEALPELAKISEFIHFACTSEDINNLSHALMLKTAREEVILPEWQNLIADISALANEYKTIPLLSRTHGQPASPSTIGKEMANVVYRLQRQFKQLQQIDILGKINGAVGNYNAHLSAYPDIDWHQFSEEFVTSLGLTWNPYTTQIEPHDYIAEFFDNVARFNTIIIDFDRDLWGYIALNHFKQRTIAGEIGSSTMPHKVNPIDFENSEGNLGLANAVMAHLGAKLPVSRWQRDLTDSTVLRNLGVGLGYCLIAYAATRKGISKLEVNEQHLRDELDQNWEVLAEPIQTVMRRYGIEKPYEKLKALTRGKRVDAEAMREFIETLDIPAQEKIRLQQMTPATYIGAAVELVEKL
>NZ_CP048402.1|WP_163884132.1|1530882_1532469_-|L-lactate-permease
MVFFLSILPIVLLIYLMVKRNSLPSYIALPLIAVLTYLLQAFYFGTDLTRLNANVIAGLIATQTPITIIFGAILFNRMMEVSGSTDVLRKWLANINPNPVAQIMIIGWAFAFMIEGASGFGTPAAIAAPILMGLGFKPLQVAMLALVMNSVPVSFGAVGTPTWFGFGPLGLSEDVVLEVGQKTAFIHFIAAFVIPVLALRFLVSWQQIKQNLVFIYISILACTIPYFLLAQVNYEFPALVGGAIGLFISILVANKGIGVSKTAQAEIQLEKVEFGVLVKALFPTMMLIAILIVTRIHQLGIKQLLNDATTWFSVSLGAFGEFKVSQALILSLNNILGQGINESYKTLYVPSLIPFIVTVIISIFVFKLNGAKAKTIAVSTYQQTKKPFFALLGALVMVKLMLVGNENYDSMVMTIGKTFADVTGDKWVYFSSYLGAIGAFFSGSNTVSNLTFGGIQLSIAETTGMSVPLILALQSVGGAMGNMVCLNNIIAVCTVLNVSNQEGSILKRTVVPMFLYGVIAALVAVVIY
>NZ_CP048402.1|WP_064972641.1|1545828_1547157_-|ATP-dependent-RNA-helicase-SrmB
MTLATFQDFDLAPALLKALAKKGYTRPTAIQQETIPAAMEQRDVLGSAPTGTGKTAAFLLPAIQHLLDYPRRKPGAPRILILTPTRELAMQVAEQAESFAEFTNLSIATITGGVAYQNHGEIFNSNQDIVVATPGRLLQYIKEENFDCRSVEILIFDEADRMLQMGFGQDAEKIAAETRWRKQTLLFSATLEGELLVDFASRLLTDPVQIDAEPSRRERKKIQQWYYHADSNEHKIKLLARFIDEEQVSRGIVFVRRREDVRELSETLRKRGIRSTYLEGEMAQTQRNNAIDKLKNGIVTVLVATDVAARGIDIEDVSHVMNFDLPYSADTYLHRIGRTARAGKKGVAVSFVEAHDYKLLGKIKRYTQELLKARIIEGLAPRTKAPKEGEVKTVSKKQKARIKAKREEKQKQEQKKKVKLRHKDTKNIGKRRKSNTLPANAE
>NZ_CP048402.1|WP_014326415.1|1547268_1547982_+|tRNA1(Val)-(adenine(37)-N6)-methyltransferase
MSAKQNGFTFKQFHIEHHRCAMKVGTDGILLGAWADVSQAERILDLGTGTGLIALMLAQRSTKESEIHAVELDQAAYLQAQANIHASPWAQRVHVYQQDAAEFCRNAVNKFDLIVANPPYFPQGVDCATPQRDLARYTATHRHVDWLNWASHCLSEQGKISMVLPFEAGETLLKQTALYCIARCEVITKKGKAPQRLLLTFSLQAQPLQPSQLIIYDESNRYHPDFIGLTKDFYLAF
>NZ_CP048402.1|WP_005724867.1|1548029_1548734_-|nicotinamide-riboside-transporter-PnuC
MNLQAVKNEFLGGWKPFEVAWLSLFLIAQIVIYIQNPDSILGMISGISGILCVVFVSKGKVSNYFFGLIFAYTYFYVAWQANYLGEMNTVLYVYIPAQFIGYFLWRENLQKGSEGAESVIAKSLTLKGWAIVLGTITIGTLLFVQALNAAGGSSTGLDGLTTVIVVVAQLLMILRYREQWLLWIALNVISIVLWTQAKEGSLAMVTMYSAYLLNSLYGYYNWTKLEKAHRQSVQ
>NZ_CP048402.1|WP_163884135.1|1549009_1551913_+|RNA-polymerase-associated-protein-RapA
MTFAVGQRWMSESENNLGLGLIVAIDMRTVTILFPASEEQRIYALNSAPLTRVLFQIGDEIVHHEGWKGNVLDILENNGVAFYLLKRQDNGEEITIQERDIAHQMTFSKPQDRLFTTQIDRNEHFTLRYQALTHQQAQFQSPLRALRGIRAGLIPHQLHIAREVGQRTAPRVLLADEVGLGKTIEAGMILQQQLFAEKVERVLIIVPETLQYQWLVEMLRRFNLHFALFDEERCADFEDPASALWINPFSTESQIICALDWLCEKPKRVEQLLEAGFDMLIVDEAHHLGWSEHNPSLEYQLVEQLARQIPAVLLLTATPEQLGQESHFARLSLLDPDRFYDYQAFVQEQQQYQPVADAVQSLLADKPLSAVEKNHIADLLSEQDVEPMLKVIDSQAHDEQKALARQELIDNLIDRHGTSRVLFRNTRQGVKGFPHRTYNQITLELPKQYNNAANVLAMLGEKSENDSFYPEQMFQKLNPDARWWEFDPRLAWLITFLKNHREEKLLVICRHANTTIQLEQALREKEAIRAAVFHEKLSIVERDRAAAYFAQQEDGAQVLLSSSIGSEGRNFQFASHLVLFNLPDDPDLLEQCIGRLDRIGQSRDIQIHVPCFADTAQVVLARWYHEGLNAFEETCPMGMTLFETHQTQLNKFLQKPTALEGFAEFVSLTRKQQYELKQALEKGRDRLLELNSNGGEQAQQLATDIAEQDGTTELVNFTLNLFDIIGVDQEDLGEKSIVITPASNMLVPDFPGLKEEGATVTFDRQLSLAREDVEFMSWDHPLIRHGIDLITSGDIGKSAVSLLINKALPAGTLLLEMIYVVEAQAPKGLQLTRFLPPTPIRLLLDQKGNNLAEQVSFNALQKQLKPIGKNMANKVVKMVRPNIEQLVKLSEQKIVAQAQQIIHNAQQLADQTLSAELNRLTALQAVNKNIRQDEVEALENIRSQSLAQLKQATWRLDSLRVIVSNKE
>NZ_CP048402.1|WP_163884136.1|1551993_1552653_+|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA
MALISYTPPTDPYLDIVHYDDHFVVINKPSGLLSVPGNQPQYYDSAMSRVKEKYGFCEPAHRLDMSTSGLILFALSKAADRELKRQFREREPKKHYQALVWGHLEEDHGEVNLPLICDWENRPRQKICFERGKPALTLYEVLARYPNNTTRVKLTPITGRSHQLRLHMLALGHPILGDKFYAPPQAKALSPRLCLHAEQLAFRHPITQKWLSFSAPPAF
>NZ_CP048402.1|WP_005755466.1|1552716_1553286_+|Der-GTPase-activating-protein-YihI
MARKKKTRRVSDIMPARKVDKKVELPKGKPGKKLTRYELDAKAREDKKKKKRKGLASGSRHSATENNNNHQALAKKDPRLGSRKKVPLIVEFVNKPEKGMTIPPMKVEEKVAKLDPMLELEQLENNECLNQLLDALDAGKTLSAEDQQFVDDCLDRIAQLMDELGISEDDDPEEDLLRTFEKIDINQFR
>NZ_CP048402.1|WP_005724851.1|1553291_1553720_+|DUF2489-domain-containing-protein
MWTNILLILAVLVIVAMASYAGYLLLALQKQKKAIANMRTARSQRLTESIVIIAKAMQNGDCNHSEGVIRLKMLLDPLGKKLKNYQAMYQLYEVVMDMPTHEKRRELKKNERMRLDLQRESAEAELEQKIRLELQQLLIDMK
>NZ_CP048402.1|WP_163884137.1|1553743_1555111_+|oxygen-independent-coproporphyrinogen-III-oxidase
MSDIVWDLALIQKYNQSGPRYTSYPTALEFNENYTNQDFIQATKRYPNRPLSLYIHIPFCHKLCYFCACNKTITRHQHKADIYLDFLEREIENRAPLFKDRIATQVHWGGGTPTYLTEQQAARLMAMLRKHFTIAPDAEISIEMDPREIELNMLDHLRRIGFNRMSMGVQDFNKDVQKAINRVQDEDFIEALLKRARELGFQSTNLDLIYGLPLQNVDSFMFTLQKVIALNPDRLSVFNYAHLPSRFAGQAKIKNEQLPAPETKLTILQKMIETLGDAGYKFIGMDHFAKPDDELAIAQQQGVLHRNFQGYTTQEECDLLGLGVSAISLLGDTYAQNQKELKHYYTAIDNTGIALHKGFAMSEEDCLRRDVIKQLICNFKLDYQPIEQQYGIQFTSHFAEDLKLLAPLSEDGLLEIGEKAIQVSAKGRLLIRNICLCFDTYSREQAKRQQFSRII
>NZ_CP048402.1|WP_163884138.1|1555151_1555820_+|NAD(P)H-dependent-oxidoreductase
MSISKTDILNAFHFRHACKAYDPSKKISEEDFRFILETGRLSPSSFGFEPWKFLVIENPDIKALIRDTAWGAKDKVMDCSHFVVVLVRQPETLLADGEYVQHMMRDVHHIPEEMRKIRQNFYRTFSEQDFALTENPKAFYDWACRQSYIALANMLTSAAMIGIDSTPIEGFPLEKMDQAFVEQGLYDPKTYKLSVMIAFGYRLNEPKTKTRQAFDDVVEWVR
>NZ_CP048402.1|WP_005752888.1|1555915_1556251_-|helix-turn-helix-transcriptional-regulator
MQITRRNASTKGASVAEIDRKKVRNEIIQAMLMGELSQGEALRKLRIEMFGINQQHYIQLVKVSRQTLSNIENDKGNYSVETINKVFKPFGLELGLVPVSKALLKELFSTA

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP048402_1	1.12\|31420\|30\|NZ_CP048402\|PILER-CR,CRISPRCasFinder,CRT	31420-31449	30	NZ_CP048402.1	653812-653841	2	0.933

1. spacer 1.12|31420|30|NZ_CP048402|PILER-CR,CRISPRCasFinder,CRT matches to position: 653812-653841, mismatch: 2, identity: 0.933

agtgttcattaactttgtaaccaacttcgc	CRISPR spacer
agtgtttattaactttgtaactaacttcgc	Protospacer
******.**************.********

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP048402_1	1.17\|31750\|30\|NZ_CP048402\|PILER-CR,CRISPRCasFinder,CRT	31750-31779	30	MH238467	Pasteurella phage Pm86, complete genome	14536-14565	0	1.0
NZ_CP048402_4	4.31\|1544600\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1544600-1544631	32	MH238466	Pasteurella phage AFS-2018a, complete genome	4365-4396	0	1.0
NZ_CP048402_4	4.32\|1544660\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1544660-1544691	32	MH238466	Pasteurella phage AFS-2018a, complete genome	1060-1091	0	1.0
NZ_CP048402_1	1.2\|30760\|30\|NZ_CP048402\|PILER-CR,CRISPRCasFinder,CRT	30760-30789	30	MH238466	Pasteurella phage AFS-2018a, complete genome	25422-25451	1	0.967
NZ_CP048402_4	4.3\|1542924\|32\|NZ_CP048402\|CRISPRCasFinder,CRT	1542924-1542955	32	MH238467	Pasteurella phage Pm86, complete genome	24677-24708	1	0.969
NZ_CP048402_4	4.50\|1542925\|31\|NZ_CP048402\|PILER-CR	1542925-1542955	31	MH238467	Pasteurella phage Pm86, complete genome	24677-24707	1	0.968
NZ_CP048402_4	4.2\|1542864\|32\|NZ_CP048402\|CRISPRCasFinder,CRT	1542864-1542895	32	MH238467	Pasteurella phage Pm86, complete genome	20652-20683	2	0.938
NZ_CP048402_4	4.33\|1544720\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1544720-1544751	32	MH238467	Pasteurella phage Pm86, complete genome	52741-52772	2	0.938
NZ_CP048402_4	4.49\|1542865\|31\|NZ_CP048402\|PILER-CR	1542865-1542895	31	MH238467	Pasteurella phage Pm86, complete genome	20653-20683	2	0.935
NZ_CP048402_1	1.7\|31090\|30\|NZ_CP048402\|PILER-CR,CRISPRCasFinder,CRT	31090-31119	30	MT902335	Pasteurella phage vB_PmuP_Pa7, complete genome	15141-15170	3	0.9
NZ_CP048402_1	1.7\|31090\|30\|NZ_CP048402\|PILER-CR,CRISPRCasFinder,CRT	31090-31119	30	NC_047832	Pasteurella phage PHB01, complete genome	15328-15357	3	0.9
NZ_CP048402_1	1.7\|31090\|30\|NZ_CP048402\|PILER-CR,CRISPRCasFinder,CRT	31090-31119	30	NC_047831	Pasteurella phage PHB02, complete genome	22305-22334	3	0.9
NZ_CP048402_1	1.5\|30958\|30\|NZ_CP048402\|PILER-CR,CRISPRCasFinder,CRT	30958-30987	30	NZ_AP019553	Athalassotoga saccharophila strain NAS-01 plasmid pATS2, complete sequence	1160-1189	5	0.833
NZ_CP048402_4	4.16\|1543705\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1543705-1543736	32	MN855800	Bacteriophage sp. isolate 98, complete genome	16836-16867	5	0.844
NZ_CP048402_4	4.29\|1544480\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1544480-1544511	32	MN855800	Bacteriophage sp. isolate 98, complete genome	16836-16867	5	0.844
NZ_CP048402_1	1.3\|30826\|30\|NZ_CP048402\|PILER-CR,CRISPRCasFinder,CRT	30826-30855	30	NZ_CP032813	Escherichia coli strain ERL03-1416 plasmid pERL03-1416-2, complete sequence	48549-48578	6	0.8
NZ_CP048402_1	1.6\|31024\|30\|NZ_CP048402\|PILER-CR,CRISPRCasFinder,CRT	31024-31053	30	AP014217	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C88-MedDCM-OCT-S36-C169, * SEQUENCING IN PROGRESS *	5989-6018	6	0.8
NZ_CP048402_4	4.44\|1545381\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1545381-1545412	32	NZ_CP050445	Tolypothrix sp. PCC 7910 plasmid unnamed5, complete sequence	35774-35805	6	0.812
NZ_CP048402_1	1.2\|30760\|30\|NZ_CP048402\|PILER-CR,CRISPRCasFinder,CRT	30760-30789	30	NZ_CP030201	Salmonella enterica strain SA20051401 plasmid pSA20051401.5, complete sequence	275-304	7	0.767
NZ_CP048402_1	1.3\|30826\|30\|NZ_CP048402\|PILER-CR,CRISPRCasFinder,CRT	30826-30855	30	NZ_CP024864	Escherichia coli strain AR_0015 plasmid unitig_2_pilon, complete sequence	88293-88322	7	0.767
NZ_CP048402_1	1.3\|30826\|30\|NZ_CP048402\|PILER-CR,CRISPRCasFinder,CRT	30826-30855	30	NC_011413	Escherichia coli SE11 plasmid pSE11-2, complete sequence	61847-61876	7	0.767
NZ_CP048402_1	1.3\|30826\|30\|NZ_CP048402\|PILER-CR,CRISPRCasFinder,CRT	30826-30855	30	NZ_CP030785	Escherichia albertii strain 2012EL-1823B plasmid unnamed2, complete sequence	18967-18996	7	0.767
NZ_CP048402_1	1.3\|30826\|30\|NZ_CP048402\|PILER-CR,CRISPRCasFinder,CRT	30826-30855	30	CP054565	Escherichia coli strain SCU-478 isolate rectal swab from healthy college student plasmid pSCU-478-1, complete sequence	93680-93709	7	0.767
NZ_CP048402_1	1.3\|30826\|30\|NZ_CP048402\|PILER-CR,CRISPRCasFinder,CRT	30826-30855	30	NZ_CP010201	Escherichia coli strain M10 plasmid A, complete sequence	38370-38399	7	0.767
NZ_CP048402_1	1.3\|30826\|30\|NZ_CP048402\|PILER-CR,CRISPRCasFinder,CRT	30826-30855	30	NZ_LR214986	Mycoplasma cynos strain NCTC10142 plasmid 13	469373-469402	7	0.767
NZ_CP048402_1	1.17\|31750\|30\|NZ_CP048402\|PILER-CR,CRISPRCasFinder,CRT	31750-31779	30	NZ_CP021334	Marinobacter salarius strain HL2708#2 plasmid pHL2708Z5, complete sequence	232622-232651	7	0.767
NZ_CP048402_3	3.5\|300841\|32\|NZ_CP048402\|PILER-CR,CRISPRCasFinder,CRT	300841-300872	32	KU686195	Synechococcus phage S-CAM1 isolate 0810SB17, complete genome	141761-141792	7	0.781
NZ_CP048402_3	3.5\|300841\|32\|NZ_CP048402\|PILER-CR,CRISPRCasFinder,CRT	300841-300872	32	AP014499	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S27-C8, * SEQUENCING IN PROGRESS *, 2 ordered pieces	8954-8985	7	0.781
NZ_CP048402_3	3.5\|300841\|32\|NZ_CP048402\|PILER-CR,CRISPRCasFinder,CRT	300841-300872	32	KU686193	Synechococcus phage S-CAM1 isolate 0310NB17, complete genome	141763-141794	7	0.781
NZ_CP048402_3	3.5\|300841\|32\|NZ_CP048402\|PILER-CR,CRISPRCasFinder,CRT	300841-300872	32	HQ634177	Synechococcus phage S-CAM1 genomic sequence	149496-149527	7	0.781
NZ_CP048402_3	3.5\|300841\|32\|NZ_CP048402\|PILER-CR,CRISPRCasFinder,CRT	300841-300872	32	KU686194	Synechococcus phage S-CAM1 isolate 0809CC03, complete genome	141761-141792	7	0.781
NZ_CP048402_3	3.5\|300841\|32\|NZ_CP048402\|PILER-CR,CRISPRCasFinder,CRT	300841-300872	32	KU686196	Synechococcus phage S-CAM1 isolate 0910CC29, complete genome	141761-141792	7	0.781
NZ_CP048402_3	3.5\|300841\|32\|NZ_CP048402\|PILER-CR,CRISPRCasFinder,CRT	300841-300872	32	KU686192	Synechococcus phage S-CAM1 isolate 0309SB33, complete genome	141760-141791	7	0.781
NZ_CP048402_4	4.1\|1542804\|32\|NZ_CP048402\|CRISPRCasFinder,CRT	1542804-1542835	32	KM606997	Enterobacteria phage RB7, complete genome	22179-22210	7	0.781
NZ_CP048402_4	4.1\|1542804\|32\|NZ_CP048402\|CRISPRCasFinder,CRT	1542804-1542835	32	KM606998	Enterobacteria phage RB9, complete genome	22179-22210	7	0.781
NZ_CP048402_4	4.3\|1542924\|32\|NZ_CP048402\|CRISPRCasFinder,CRT	1542924-1542955	32	MN692977	Marine virus AFVG_117M37, complete genome	11147-11178	7	0.781
NZ_CP048402_4	4.6\|1543104\|32\|NZ_CP048402\|CRISPRCasFinder,CRT	1543104-1543135	32	NZ_CP049159	Caballeronia sp. SBC1 plasmid pSBC1_3, complete sequence	428949-428980	7	0.781
NZ_CP048402_4	4.6\|1543104\|32\|NZ_CP048402\|CRISPRCasFinder,CRT	1543104-1543135	32	NZ_CP049320	Caballeronia sp. SBC2 plasmid pSBC2-4, complete sequence	358416-358447	7	0.781
NZ_CP048402_4	4.13\|1543525\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1543525-1543556	32	MN856069	Bacteriophage sp. isolate 102, complete genome	46215-46246	7	0.781
NZ_CP048402_4	4.21\|1544005\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1544005-1544036	32	MK250029	Prevotella phage Lak-C1, complete genome	377656-377687	7	0.781
NZ_CP048402_4	4.21\|1544005\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1544005-1544036	32	MK250016	Prevotella phage Lak-A1, complete genome	412429-412460	7	0.781
NZ_CP048402_4	4.21\|1544005\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1544005-1544036	32	MK250019	Prevotella phage Lak-A2, complete genome	331614-331645	7	0.781
NZ_CP048402_4	4.21\|1544005\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1544005-1544036	32	NC_014824	Ruminococcus albus 7 = DSM 20455 plasmid pRUMAL01, complete sequence	300860-300891	7	0.781
NZ_CP048402_4	4.21\|1544005\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1544005-1544036	32	NZ_LR214986	Mycoplasma cynos strain NCTC10142 plasmid 13	769129-769160	7	0.781
NZ_CP048402_4	4.33\|1544720\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1544720-1544751	32	MK494110	Mycobacterium phage SwagPigglett, complete genome	36118-36149	7	0.781
NZ_CP048402_4	4.33\|1544720\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1544720-1544751	32	MH155865	Mycobacterium phage BobaPhett, complete genome	36322-36353	7	0.781
NZ_CP048402_4	4.33\|1544720\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1544720-1544751	32	KR997968	Mycobacterium phage Quico, complete genome	35504-35535	7	0.781
NZ_CP048402_4	4.33\|1544720\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1544720-1544751	32	MK524517	Mycobacterium phage James, complete genome	35200-35231	7	0.781
NZ_CP048402_4	4.33\|1544720\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1544720-1544751	32	MT310893	Mycobacterium phage DRBy19, complete genome	35109-35140	7	0.781
NZ_CP048402_4	4.33\|1544720\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1544720-1544751	32	MH399771	Mycobacterium phage ByChance, complete genome	29406-29437	7	0.781
NZ_CP048402_4	4.33\|1544720\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1544720-1544751	32	KJ025956	Mycobacterium phage Saal, complete genome	35063-35094	7	0.781
NZ_CP048402_4	4.33\|1544720\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1544720-1544751	32	MH590602	Mycobacterium phage Gorge, complete genome	35243-35274	7	0.781
NZ_CP048402_4	4.33\|1544720\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1544720-1544751	32	KR997930	Mycobacterium phage Florinda, complete genome	35684-35715	7	0.781
NZ_CP048402_4	4.33\|1544720\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1544720-1544751	32	MH155871	Mycobacterium phage Mattes, complete genome	35200-35231	7	0.781
NZ_CP048402_4	4.38\|1545020\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1545020-1545051	32	NZ_CP028515	Carboxydocella thermautotrophica strain 041T plasmid pCCELLA01, complete sequence	4790-4821	7	0.781
NZ_CP048402_4	4.44\|1545381\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1545381-1545412	32	NZ_LR214939	Mycoplasma salivarium strain NCTC10113 plasmid 2	653791-653822	7	0.781
NZ_CP048402_4	4.44\|1545381\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1545381-1545412	32	MG209611	Aphanizomenon phage vB_AphaS-CL131, complete genome	110539-110570	7	0.781
NZ_CP048402_4	4.46\|1545501\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1545501-1545532	32	CP000876	Herpetosiphon aurantiacus DSM 785 plasmid pHAU01, complete sequence	63289-63320	7	0.781
NZ_CP048402_4	4.49\|1542865\|31\|NZ_CP048402\|PILER-CR	1542865-1542895	31	NC_019699	Chroococcidiopsis thermalis PCC 7203 plasmid pCHRO.01, complete sequence	173386-173416	7	0.774
NZ_CP048402_4	4.50\|1542925\|31\|NZ_CP048402\|PILER-CR	1542925-1542955	31	NC_001884	Bacillus phage SPBc2, complete genome	31289-31319	7	0.774
NZ_CP048402_4	4.50\|1542925\|31\|NZ_CP048402\|PILER-CR	1542925-1542955	31	AF020713	Bacteriophage SPBc2 complete genome	31289-31319	7	0.774
NZ_CP048402_4	4.50\|1542925\|31\|NZ_CP048402\|PILER-CR	1542925-1542955	31	MT366946	Bacillus phage Hyb1phi3Ts-SPbeta, complete genome	23377-23407	7	0.774
NZ_CP048402_4	4.50\|1542925\|31\|NZ_CP048402\|PILER-CR	1542925-1542955	31	NZ_CP032824	Arcobacter cryaerophilus ATCC 43158 plasmid pACRY43158, complete sequence	46625-46655	7	0.774
NZ_CP048402_4	4.50\|1542925\|31\|NZ_CP048402\|PILER-CR	1542925-1542955	31	NZ_MK715471	Arcobacter cryaerophilus strain M830MA plasmid pM830MA, complete sequence	155597-155627	7	0.774
NZ_CP048402_4	4.50\|1542925\|31\|NZ_CP048402\|PILER-CR	1542925-1542955	31	MN692977	Marine virus AFVG_117M37, complete genome	11148-11178	7	0.774
NZ_CP048402_4	4.52\|1543045\|31\|NZ_CP048402\|PILER-CR	1543045-1543075	31	MG640035	Vibrio phage Athena1, complete genome	5010-5040	7	0.774
NZ_CP048402_4	4.52\|1543045\|31\|NZ_CP048402\|PILER-CR	1543045-1543075	31	NZ_CP015809	Borrelia mayonii strain MN14-1539 plasmid lp54	49309-49339	7	0.774
NZ_CP048402_4	4.52\|1543045\|31\|NZ_CP048402\|PILER-CR	1543045-1543075	31	NZ_CP015795	Borrelia mayonii strain MN14-1420 plasmid lp54, complete sequence	49325-49355	7	0.774
NZ_CP048402_1	1.6\|31024\|30\|NZ_CP048402\|PILER-CR,CRISPRCasFinder,CRT	31024-31053	30	MG592435	Vibrio phage 1.055.O._10N.286.55.E9, partial genome	25522-25551	8	0.733
NZ_CP048402_1	1.6\|31024\|30\|NZ_CP048402\|PILER-CR,CRISPRCasFinder,CRT	31024-31053	30	MG592432	Vibrio phage 1.050.O._10N.286.48.A6, partial genome	23637-23666	8	0.733
NZ_CP048402_1	1.6\|31024\|30\|NZ_CP048402\|PILER-CR,CRISPRCasFinder,CRT	31024-31053	30	MG592431	Vibrio phage 1.049.O._10N.286.54.B5, partial genome	23376-23405	8	0.733
NZ_CP048402_1	1.6\|31024\|30\|NZ_CP048402\|PILER-CR,CRISPRCasFinder,CRT	31024-31053	30	MT254578	Bacillus phage Izhevsk, complete genome	18190-18219	8	0.733
NZ_CP048402_1	1.13\|31486\|30\|NZ_CP048402\|PILER-CR,CRISPRCasFinder,CRT	31486-31515	30	NZ_CP012912	Streptococcus suis strain NSUI060 plasmid pNSUI060a, complete sequence	4600-4629	8	0.733
NZ_CP048402_1	1.13\|31486\|30\|NZ_CP048402\|PILER-CR,CRISPRCasFinder,CRT	31486-31515	30	MK448542	Streptococcus satellite phage Javan560, complete genome	1504-1533	8	0.733
NZ_CP048402_1	1.13\|31486\|30\|NZ_CP048402\|PILER-CR,CRISPRCasFinder,CRT	31486-31515	30	MK448560	Streptococcus satellite phage Javan598, complete genome	1390-1419	8	0.733
NZ_CP048402_1	1.16\|31684\|30\|NZ_CP048402\|PILER-CR,CRISPRCasFinder,CRT	31684-31713	30	MK368614	Vibrio phage 2 TSL-2019, complete genome	188172-188201	8	0.733
NZ_CP048402_1	1.17\|31750\|30\|NZ_CP048402\|PILER-CR,CRISPRCasFinder,CRT	31750-31779	30	NC_021796	Cellulophaga phage phi38:1, complete genome	35845-35874	8	0.733
NZ_CP048402_1	1.17\|31750\|30\|NZ_CP048402\|PILER-CR,CRISPRCasFinder,CRT	31750-31779	30	KC821612	Cellulophaga phage phi40:1, complete genome	35843-35872	8	0.733
NZ_CP048402_1	1.17\|31750\|30\|NZ_CP048402\|PILER-CR,CRISPRCasFinder,CRT	31750-31779	30	NC_021560	Rhizobium phage RR1-A genomic sequence	35812-35841	8	0.733
NZ_CP048402_4	4.2\|1542864\|32\|NZ_CP048402\|CRISPRCasFinder,CRT	1542864-1542895	32	NC_019699	Chroococcidiopsis thermalis PCC 7203 plasmid pCHRO.01, complete sequence	173385-173416	8	0.75
NZ_CP048402_4	4.3\|1542924\|32\|NZ_CP048402\|CRISPRCasFinder,CRT	1542924-1542955	32	NZ_CP032824	Arcobacter cryaerophilus ATCC 43158 plasmid pACRY43158, complete sequence	46625-46656	8	0.75
NZ_CP048402_4	4.3\|1542924\|32\|NZ_CP048402\|CRISPRCasFinder,CRT	1542924-1542955	32	NZ_MK715471	Arcobacter cryaerophilus strain M830MA plasmid pM830MA, complete sequence	155597-155628	8	0.75
NZ_CP048402_4	4.3\|1542924\|32\|NZ_CP048402\|CRISPRCasFinder,CRT	1542924-1542955	32	NC_001884	Bacillus phage SPBc2, complete genome	31288-31319	8	0.75
NZ_CP048402_4	4.3\|1542924\|32\|NZ_CP048402\|CRISPRCasFinder,CRT	1542924-1542955	32	AF020713	Bacteriophage SPBc2 complete genome	31288-31319	8	0.75
NZ_CP048402_4	4.3\|1542924\|32\|NZ_CP048402\|CRISPRCasFinder,CRT	1542924-1542955	32	MT366946	Bacillus phage Hyb1phi3Ts-SPbeta, complete genome	23376-23407	8	0.75
NZ_CP048402_4	4.3\|1542924\|32\|NZ_CP048402\|CRISPRCasFinder,CRT	1542924-1542955	32	NZ_CP013040	Clostridium perfringens strain JP838 plasmid pJFP838C, complete sequence	4830-4861	8	0.75
NZ_CP048402_4	4.3\|1542924\|32\|NZ_CP048402\|CRISPRCasFinder,CRT	1542924-1542955	32	NZ_KT020842	Clostridium perfringens strain JP838 plasmid pJP838B, complete sequence	28949-28980	8	0.75
NZ_CP048402_4	4.3\|1542924\|32\|NZ_CP048402\|CRISPRCasFinder,CRT	1542924-1542955	32	NC_011412	Clostridium perfringens plasmid pCP8533etx, complete sequence	55464-55495	8	0.75
NZ_CP048402_4	4.3\|1542924\|32\|NZ_CP048402\|CRISPRCasFinder,CRT	1542924-1542955	32	NZ_CP009558	Clostridium perfringens strain FORC_003 plasmid pFORC3, complete sequence	25831-25862	8	0.75
NZ_CP048402_4	4.3\|1542924\|32\|NZ_CP048402\|CRISPRCasFinder,CRT	1542924-1542955	32	NZ_CP023413	Clostridium perfringens strain LLY_N11 plasmid pLLY_N11_3, complete sequence	62462-62493	8	0.75
NZ_CP048402_4	4.3\|1542924\|32\|NZ_CP048402\|CRISPRCasFinder,CRT	1542924-1542955	32	NC_007772	Clostridium perfringens CPE str. F4969 plasmid pCPF4969, complete sequence	165-196	8	0.75
NZ_CP048402_4	4.3\|1542924\|32\|NZ_CP048402\|CRISPRCasFinder,CRT	1542924-1542955	32	NC_007773	Clostridium perfringens plasmid pCPF5603, complete sequence	12684-12715	8	0.75
NZ_CP048402_4	4.5\|1543044\|32\|NZ_CP048402\|CRISPRCasFinder,CRT	1543044-1543075	32	NZ_CP015809	Borrelia mayonii strain MN14-1539 plasmid lp54	49309-49340	8	0.75
NZ_CP048402_4	4.5\|1543044\|32\|NZ_CP048402\|CRISPRCasFinder,CRT	1543044-1543075	32	NZ_CP015795	Borrelia mayonii strain MN14-1420 plasmid lp54, complete sequence	49325-49356	8	0.75
NZ_CP048402_4	4.7\|1543164\|32\|NZ_CP048402\|CRISPRCasFinder,CRT	1543164-1543195	32	LC168164	Tenacibaculum phage pT24 DNA, complete genome	19060-19091	8	0.75
NZ_CP048402_4	4.21\|1544005\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1544005-1544036	32	NC_031121	Bacillus phage Aurora, complete genome	12089-12120	8	0.75
NZ_CP048402_4	4.21\|1544005\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1544005-1544036	32	NZ_CP009119	Borreliella valaisiana Tom4006 plasmid lp54, complete sequence	21593-21624	8	0.75
NZ_CP048402_4	4.21\|1544005\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1544005-1544036	32	MN693791	Marine virus AFVG_250M854, complete genome	6423-6454	8	0.75
NZ_CP048402_4	4.30\|1544540\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1544540-1544571	32	NZ_CP045351	Vibrio sp. THAF100 plasmid pTHAF100_a, complete sequence	147679-147710	8	0.75
NZ_CP048402_4	4.38\|1545020\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1545020-1545051	32	NZ_CP045731	Lactobacillus gastricus strain LG045 plasmid unnamed2, complete sequence	978-1009	8	0.75
NZ_CP048402_4	4.50\|1542925\|31\|NZ_CP048402\|PILER-CR	1542925-1542955	31	NC_007773	Clostridium perfringens plasmid pCPF5603, complete sequence	12685-12715	8	0.742
NZ_CP048402_4	4.50\|1542925\|31\|NZ_CP048402\|PILER-CR	1542925-1542955	31	NZ_CP013040	Clostridium perfringens strain JP838 plasmid pJFP838C, complete sequence	4830-4860	8	0.742
NZ_CP048402_4	4.50\|1542925\|31\|NZ_CP048402\|PILER-CR	1542925-1542955	31	NZ_KT020842	Clostridium perfringens strain JP838 plasmid pJP838B, complete sequence	28949-28979	8	0.742
NZ_CP048402_4	4.50\|1542925\|31\|NZ_CP048402\|PILER-CR	1542925-1542955	31	NC_011412	Clostridium perfringens plasmid pCP8533etx, complete sequence	55464-55494	8	0.742
NZ_CP048402_4	4.50\|1542925\|31\|NZ_CP048402\|PILER-CR	1542925-1542955	31	NZ_CP009558	Clostridium perfringens strain FORC_003 plasmid pFORC3, complete sequence	25831-25861	8	0.742
NZ_CP048402_4	4.50\|1542925\|31\|NZ_CP048402\|PILER-CR	1542925-1542955	31	NZ_CP023413	Clostridium perfringens strain LLY_N11 plasmid pLLY_N11_3, complete sequence	62462-62492	8	0.742
NZ_CP048402_4	4.50\|1542925\|31\|NZ_CP048402\|PILER-CR	1542925-1542955	31	NC_007772	Clostridium perfringens CPE str. F4969 plasmid pCPF4969, complete sequence	165-195	8	0.742
NZ_CP048402_4	4.52\|1543045\|31\|NZ_CP048402\|PILER-CR	1543045-1543075	31	NC_006129	Borreliella bavariensis PBi plasmid lp54, complete sequence	51210-51240	8	0.742
NZ_CP048402_4	4.52\|1543045\|31\|NZ_CP048402\|PILER-CR	1543045-1543075	31	NC_017804	Borreliella garinii BgVir plasmid lp54, complete sequence	4795-4825	8	0.742
NZ_CP048402_1	1.3\|30826\|30\|NZ_CP048402\|PILER-CR,CRISPRCasFinder,CRT	30826-30855	30	MK448885	Streptococcus phage Javan252, complete genome	31489-31518	9	0.7
NZ_CP048402_1	1.6\|31024\|30\|NZ_CP048402\|PILER-CR,CRISPRCasFinder,CRT	31024-31053	30	NZ_CP036488	Rahnella aquatilis strain MEM40 plasmid pMEM40-1, complete sequence	247844-247873	9	0.7
NZ_CP048402_1	1.6\|31024\|30\|NZ_CP048402\|PILER-CR,CRISPRCasFinder,CRT	31024-31053	30	NZ_CP032297	Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence	319434-319463	9	0.7
NZ_CP048402_1	1.6\|31024\|30\|NZ_CP048402\|PILER-CR,CRISPRCasFinder,CRT	31024-31053	30	NC_017060	Rahnella aquatilis HX2 plasmid PRA1, complete sequence	320265-320294	9	0.7
NZ_CP048402_1	1.6\|31024\|30\|NZ_CP048402\|PILER-CR,CRISPRCasFinder,CRT	31024-31053	30	NC_015062	Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequence	323083-323112	9	0.7
NZ_CP048402_1	1.6\|31024\|30\|NZ_CP048402\|PILER-CR,CRISPRCasFinder,CRT	31024-31053	30	NZ_CP034838	Rahnella aquatilis strain KM12 plasmid pKM12v1, complete sequence	309843-309872	9	0.7
NZ_CP048402_1	1.6\|31024\|30\|NZ_CP048402\|PILER-CR,CRISPRCasFinder,CRT	31024-31053	30	NZ_CP034839	Rahnella aquatilis strain KM25 plasmid pKM12v2, complete sequence	309843-309872	9	0.7
NZ_CP048402_1	1.6\|31024\|30\|NZ_CP048402\|PILER-CR,CRISPRCasFinder,CRT	31024-31053	30	NZ_CP034837	Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence	275518-275547	9	0.7
NZ_CP048402_3	3.1\|300601\|32\|NZ_CP048402\|PILER-CR,CRISPRCasFinder,CRT	300601-300632	32	NZ_CP045561	Acinetobacter nosocomialis strain AC1530 plasmid pAC1530, complete sequence	88545-88576	9	0.719
NZ_CP048402_3	3.1\|300601\|32\|NZ_CP048402\|PILER-CR,CRISPRCasFinder,CRT	300601-300632	32	NZ_CP014478	Acinetobacter pittii strain AP_882 plasmid pNDM-AP_882, complete sequence	87601-87632	9	0.719
NZ_CP048402_4	4.1\|1542804\|32\|NZ_CP048402\|CRISPRCasFinder,CRT	1542804-1542835	32	NZ_CP013139	Pseudoalteromonas sp. Bsw20308 plasmid pPBSW1, complete sequence	648421-648452	9	0.719
NZ_CP048402_4	4.1\|1542804\|32\|NZ_CP048402\|CRISPRCasFinder,CRT	1542804-1542835	32	NZ_CP044084	Pseudomonas luteola strain FDAARGOS_637 plasmid unnamed1, complete sequence	87853-87884	9	0.719
NZ_CP048402_4	4.5\|1543044\|32\|NZ_CP048402\|CRISPRCasFinder,CRT	1543044-1543075	32	NZ_KX426228	Acinetobacter lwoffii strain ED23-35 plasmid pALWED1.3, complete sequence	14480-14511	9	0.719
NZ_CP048402_4	4.5\|1543044\|32\|NZ_CP048402\|CRISPRCasFinder,CRT	1543044-1543075	32	NC_017804	Borreliella garinii BgVir plasmid lp54, complete sequence	4794-4825	9	0.719
NZ_CP048402_4	4.5\|1543044\|32\|NZ_CP048402\|CRISPRCasFinder,CRT	1543044-1543075	32	NC_006129	Borreliella bavariensis PBi plasmid lp54, complete sequence	51210-51241	9	0.719
NZ_CP048402_4	4.5\|1543044\|32\|NZ_CP048402\|CRISPRCasFinder,CRT	1543044-1543075	32	NZ_KU963390	Escherichia coli strain ECO37 plasmid ECO37P2, complete sequence	38326-38357	9	0.719
NZ_CP048402_4	4.5\|1543044\|32\|NZ_CP048402\|CRISPRCasFinder,CRT	1543044-1543075	32	NZ_CP010193	Escherichia coli strain M8 plasmid B, complete genome	688-719	9	0.719
NZ_CP048402_4	4.15\|1543645\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1543645-1543676	32	NZ_CP020900	Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRphaBra5d, complete sequence	499571-499602	9	0.719
NZ_CP048402_4	4.15\|1543645\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1543645-1543676	32	NZ_CP013526	Rhizobium phaseoli strain R744 plasmid pRphaR744d, complete sequence	1151936-1151967	9	0.719
NZ_CP048402_4	4.15\|1543645\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1543645-1543676	32	NZ_CP013556	Rhizobium phaseoli strain N931 plasmid pRphaN931d, complete sequence	1116071-1116102	9	0.719
NZ_CP048402_4	4.15\|1543645\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1543645-1543676	32	NZ_CP013589	Rhizobium phaseoli strain N161 plasmid pRphaN161d, complete sequence	1004595-1004626	9	0.719
NZ_CP048402_4	4.15\|1543645\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1543645-1543676	32	NZ_CP013562	Rhizobium phaseoli strain N841 plasmid pRphaN841e, complete sequence	1151645-1151676	9	0.719
NZ_CP048402_4	4.15\|1543645\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1543645-1543676	32	NZ_CP013579	Rhizobium phaseoli strain N671 plasmid pRphaN671e, complete sequence	1139490-1139521	9	0.719
NZ_CP048402_4	4.15\|1543645\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1543645-1543676	32	NZ_CP013531	Rhizobium phaseoli strain R723 plasmid pRphaR723d, complete sequence	1024910-1024941	9	0.719
NZ_CP048402_4	4.15\|1543645\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1543645-1543676	32	NZ_CP013536	Rhizobium phaseoli strain R650 plasmid pRphaR650d, complete sequence	941011-941042	9	0.719
NZ_CP048402_4	4.15\|1543645\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1543645-1543676	32	NZ_CP013541	Rhizobium phaseoli strain R630 plasmid pRphaR630d, complete sequence	1094592-1094623	9	0.719
NZ_CP048402_4	4.15\|1543645\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1543645-1543676	32	NZ_CP013546	Rhizobium phaseoli strain R620 plasmid pRphaR620d, complete sequence	1030846-1030877	9	0.719
NZ_CP048402_4	4.15\|1543645\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1543645-1543676	32	NZ_CP013567	Rhizobium phaseoli strain N831 plasmid pRphaN831d, complete sequence	1116071-1116102	9	0.719
NZ_CP048402_4	4.15\|1543645\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1543645-1543676	32	NZ_CP013584	Rhizobium phaseoli strain N261 plasmid pRphaN261d, complete sequence	1024909-1024940	9	0.719
NZ_CP048402_4	4.15\|1543645\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1543645-1543676	32	NZ_CP013573	Rhizobium phaseoli strain N771 plasmid pRphaN771e, complete sequence	1139490-1139521	9	0.719
NZ_CP048402_4	4.15\|1543645\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1543645-1543676	32	NC_010997	Rhizobium etli CIAT 652 plasmid pC, complete sequence	1047952-1047983	9	0.719
NZ_CP048402_4	4.18\|1543825\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1543825-1543856	32	NZ_CP045276	Bacillus megaterium strain FDU301 plasmid pFDU301D, complete sequence	16679-16710	9	0.719
NZ_CP048402_4	4.18\|1543825\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1543825-1543856	32	NZ_CP013139	Pseudoalteromonas sp. Bsw20308 plasmid pPBSW1, complete sequence	207457-207488	9	0.719
NZ_CP048402_4	4.18\|1543825\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1543825-1543856	32	MG945678	UNVERIFIED: Microviridae sp. isolate 957-1801, complete genome	1118-1149	9	0.719
NZ_CP048402_4	4.21\|1544005\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1544005-1544036	32	JN638751	Bacillus phage G, complete genome	170798-170829	9	0.719
NZ_CP048402_4	4.21\|1544005\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1544005-1544036	32	NC_013940	Deferribacter desulfuricans SSM1 megaplasmid pDF308, complete sequence	130328-130359	9	0.719
NZ_CP048402_4	4.21\|1544005\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1544005-1544036	32	HM246721	Campylobacter phage vB_CcoM-IBB_35 clone Contig2, complete sequence	31367-31398	9	0.719
NZ_CP048402_4	4.23\|1544125\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1544125-1544156	32	NZ_AP019719	Clostridium butyricum strain NBRC 13949 plasmid pCBU3, complete sequence	1124-1155	9	0.719
NZ_CP048402_4	4.23\|1544125\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1544125-1544156	32	NZ_CP047810	Staphylococcus aureus strain UP_1591 plasmid unnamed, complete sequence	26677-26708	9	0.719
NZ_CP048402_4	4.26\|1544300\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1544300-1544331	32	NC_031922	Synechococcus phage S-CAM9 isolate 1109NB16, complete genome	171817-171848	9	0.719
NZ_CP048402_4	4.26\|1544300\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1544300-1544331	32	KU686204	Synechococcus phage S-CAM9 isolate 0808SB05, complete genome	171799-171830	9	0.719
NZ_CP048402_4	4.26\|1544300\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1544300-1544331	32	KU686205	Synechococcus phage S-CAM9 isolate 0908SB82, complete genome	171646-171677	9	0.719
NZ_CP048402_4	4.30\|1544540\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1544540-1544571	32	MN895435	Escherichia phage teqhal, complete genome	153459-153490	9	0.719
NZ_CP048402_4	4.30\|1544540\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1544540-1544571	32	KU925172	Escherichia phage PE37, complete genome	109777-109808	9	0.719
NZ_CP048402_4	4.30\|1544540\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1544540-1544571	32	MT176425	Citrobacter phage PhiZZ23, complete genome	55536-55567	9	0.719
NZ_CP048402_4	4.30\|1544540\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1544540-1544571	32	MK373781	Escherichia phage vB_EcoM_KAW1E185, complete genome	53533-53564	9	0.719
NZ_CP048402_4	4.30\|1544540\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1544540-1544571	32	MH553563	Enterobacteria phage RB18, complete genome	52945-52976	9	0.719
NZ_CP048402_4	4.30\|1544540\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1544540-1544571	32	MN781580	Shigella virus KRT47, complete genome	53153-53184	9	0.719
NZ_CP048402_4	4.30\|1544540\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1544540-1544571	32	MK373785	Escherichia phage vB_EcoM_OE5505, complete genome	54380-54411	9	0.719
NZ_CP048402_4	4.30\|1544540\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1544540-1544571	32	NC_042078	Shigella phage Sf24, complete genome	148424-148455	9	0.719
NZ_CP048402_4	4.30\|1544540\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1544540-1544571	32	MT446387	UNVERIFIED: Escherichia virus TH09, complete genome	103705-103736	9	0.719
NZ_CP048402_4	4.30\|1544540\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1544540-1544571	32	MK327939	Escherichia phage vB_EcoM_G4498, complete genome	54150-54181	9	0.719
NZ_CP048402_4	4.30\|1544540\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1544540-1544571	32	MH992510	Escherichia phage vB_EcoM_DalCa, complete genome	53538-53569	9	0.719
NZ_CP048402_4	4.30\|1544540\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1544540-1544571	32	MT774375	CrAssphage cr50_1, complete genome	64724-64755	9	0.719
NZ_CP048402_4	4.35\|1544840\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1544840-1544871	32	KT337346	Streptococcus phage phiARI0285-2, partial genome	3365-3396	9	0.719
NZ_CP048402_4	4.35\|1544840\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1544840-1544871	32	KX550065	Streptococcus phage SpGS-1, complete genome	34048-34079	9	0.719
NZ_CP048402_4	4.35\|1544840\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1544840-1544871	32	KY065502	Streptococcus phage IPP66, complete genome	34820-34851	9	0.719
NZ_CP048402_4	4.35\|1544840\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1544840-1544871	32	KY065479	Streptococcus phage IPP39, complete genome	34295-34326	9	0.719
NZ_CP048402_4	4.35\|1544840\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1544840-1544871	32	KT337348	Streptococcus phage phiARI0378, partial genome	3169-3200	9	0.719
NZ_CP048402_4	4.35\|1544840\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1544840-1544871	32	KY065455	Streptococcus phage IPP14, complete genome	33791-33822	9	0.719
NZ_CP048402_4	4.35\|1544840\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1544840-1544871	32	KY065487	Streptococcus phage IPP48, complete genome	34357-34388	9	0.719
NZ_CP048402_4	4.35\|1544840\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1544840-1544871	32	KT337363	Streptococcus phage phiARI0639, partial genome	3544-3575	9	0.719
NZ_CP048402_4	4.35\|1544840\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1544840-1544871	32	KT337358	Streptococcus phage phiARI0468-4, complete genome	2290-2321	9	0.719
NZ_CP048402_4	4.35\|1544840\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1544840-1544871	32	KY065501	Streptococcus phage IPP65, complete genome	35555-35586	9	0.719
NZ_CP048402_4	4.35\|1544840\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1544840-1544871	32	KY065493	Streptococcus phage IPP55, complete genome	34356-34387	9	0.719
NZ_CP048402_4	4.35\|1544840\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1544840-1544871	32	KY065491	Streptococcus phage IPP53, complete genome	33745-33776	9	0.719
NZ_CP048402_4	4.35\|1544840\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1544840-1544871	32	DQ113772	Streptococcus pneumoniae bacteriophage MM1 1998, complete genome	35198-35229	9	0.719
NZ_CP048402_4	4.35\|1544840\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1544840-1544871	32	KY065490	Streptococcus phage IPP52, complete genome	33314-33345	9	0.719
NZ_CP048402_4	4.35\|1544840\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1544840-1544871	32	KY065492	Streptococcus phage IPP54, complete genome	35409-35440	9	0.719
NZ_CP048402_4	4.35\|1544840\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1544840-1544871	32	AJ302074	Streptococcus pneumoniae bacteriophage MM1 complete genome	36553-36584	9	0.719
NZ_CP048402_4	4.35\|1544840\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1544840-1544871	32	NC_022791	Streptococcus phage phiBHN167 complete genome	35476-35507	9	0.719
NZ_CP048402_4	4.38\|1545020\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1545020-1545051	32	NZ_AP017969	Fusobacterium varium strain Fv113-g1 plasmid pFV113-g1-1, complete sequence	67713-67744	9	0.719
NZ_CP048402_4	4.41\|1545200\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1545200-1545231	32	MH491968	Escherichia phage LL5, complete genome	22200-22231	9	0.719
NZ_CP048402_4	4.41\|1545200\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1545200-1545231	32	AY308796	Bacteriophage TLS, complete genome	22144-22175	9	0.719
NZ_CP048402_4	4.41\|1545200\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1545200-1545231	32	NC_009540	Enterobacteria phage TLS, complete genome	22144-22175	9	0.719
NZ_CP048402_4	4.41\|1545200\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1545200-1545231	32	NC_047898	Salmonella phage YSP2, complete genome	28047-28078	9	0.719
NZ_CP048402_4	4.41\|1545200\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1545200-1545231	32	MH729819	Citrobacter phage Sazh, complete genome	22648-22679	9	0.719
NZ_CP048402_4	4.41\|1545200\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1545200-1545231	32	NC_047823	Citrobacter phage CF1 DK-2017, complete genome	3737-3768	9	0.719
NZ_CP048402_4	4.41\|1545200\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1545200-1545231	32	KY657202	Salmonella phage GJL01, complete genome	11870-11901	9	0.719
NZ_CP048402_4	4.41\|1545200\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1545200-1545231	32	KX015771	Salmonella phage phSE-5, complete genome	7072-7103	9	0.719
NZ_CP048402_4	4.41\|1545200\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1545200-1545231	32	LR597656	Escherichia phage Stevie_ev116 genome assembly, chromosome: 1	13432-13463	9	0.719
NZ_CP048402_4	4.41\|1545200\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1545200-1545231	32	NC_029071	Salmonella phage 36, complete genome	15655-15686	9	0.719
NZ_CP048402_4	4.41\|1545200\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1545200-1545231	32	NC_042066	Salmonella phage FSL SP-126, partial genome	12528-12559	9	0.719
NZ_CP048402_4	4.41\|1545200\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1545200-1545231	32	KX015770	Salmonella phage phSE-2, complete genome	17433-17464	9	0.719
NZ_CP048402_4	4.41\|1545200\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1545200-1545231	32	KM236241	Citrobacter phage Stevie, complete genome	13502-13533	9	0.719
NZ_CP048402_4	4.42\|1545260\|33\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1545260-1545292	33	NZ_CP009921	Bacillus megaterium NBRC 15308 = ATCC 14581 plasmid pBMV_2, complete sequence	287042-287074	9	0.727
NZ_CP048402_4	4.42\|1545260\|33\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1545260-1545292	33	NZ_CP035095	Bacillus megaterium NBRC 15308 = ATCC 14581 plasmid unnamed1, complete sequence	189897-189929	9	0.727
NZ_CP048402_4	4.44\|1545381\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1545381-1545412	32	NZ_KY270848	Enterococcus faecalis strain 2 plasmid pGTC2, complete sequence	41466-41497	9	0.719
NZ_CP048402_4	4.44\|1545381\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1545381-1545412	32	AP014343	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S38-C17, * SEQUENCING IN PROGRESS *	4819-4850	9	0.719
NZ_CP048402_4	4.46\|1545501\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1545501-1545532	32	NZ_CP053818	Vibrio cholerae strain SA7G plasmid pSA7G1, complete sequence	30263-30294	9	0.719
NZ_CP048402_4	4.50\|1542925\|31\|NZ_CP048402\|PILER-CR	1542925-1542955	31	MN850621	Escherichia phage dhabil, complete genome	30602-30632	9	0.71
NZ_CP048402_4	4.52\|1543045\|31\|NZ_CP048402\|PILER-CR	1543045-1543075	31	NZ_KX426228	Acinetobacter lwoffii strain ED23-35 plasmid pALWED1.3, complete sequence	14480-14510	9	0.71
NZ_CP048402_4	4.52\|1543045\|31\|NZ_CP048402\|PILER-CR	1543045-1543075	31	NZ_KU963390	Escherichia coli strain ECO37 plasmid ECO37P2, complete sequence	38327-38357	9	0.71
NZ_CP048402_4	4.52\|1543045\|31\|NZ_CP048402\|PILER-CR	1543045-1543075	31	NZ_CP010193	Escherichia coli strain M8 plasmid B, complete genome	689-719	9	0.71
NZ_CP048402_1	1.4\|30892\|30\|NZ_CP048402\|PILER-CR,CRISPRCasFinder,CRT	30892-30921	30	MN693680	Marine virus AFVG_250M653, complete genome	38575-38604	10	0.667
NZ_CP048402_3	3.1\|300601\|32\|NZ_CP048402\|PILER-CR,CRISPRCasFinder,CRT	300601-300632	32	NZ_CP015111	Acinetobacter sp. TGL-Y2 plasmid unnamed1, complete sequence	105653-105684	10	0.688
NZ_CP048402_4	4.3\|1542924\|32\|NZ_CP048402\|CRISPRCasFinder,CRT	1542924-1542955	32	MN850621	Escherichia phage dhabil, complete genome	30601-30632	10	0.688
NZ_CP048402_4	4.19\|1543885\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1543885-1543916	32	NZ_CP026603	Clostridiaceae bacterium 14S0207 plasmid unnamed3, complete sequence	20156-20187	10	0.688
NZ_CP048402_4	4.19\|1543885\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1543885-1543916	32	NZ_CP019601	Brachyspira hyodysenteriae strain BH718 plasmid pBH718, complete sequence	969-1000	10	0.688
NZ_CP048402_4	4.19\|1543885\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1543885-1543916	32	NC_012226	Brachyspira hyodysenteriae WA1 plasmid pBHWA1, complete sequence	611-642	10	0.688
NZ_CP048402_4	4.19\|1543885\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1543885-1543916	32	NZ_CP016085	Brachyspira hyodysenteriae ATCC 27164 strain B-78 plasmid pBhyoB78, complete sequence	18691-18722	10	0.688
NZ_CP048402_4	4.21\|1544005\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1544005-1544036	32	NZ_AP014816	Geminocystis sp. NIES-3708 plasmid pGM01, complete sequence	18991-19022	10	0.688
NZ_CP048402_4	4.21\|1544005\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1544005-1544036	32	LC425521	Uncultured phage DNA, contig: NODE562	13857-13888	10	0.688
NZ_CP048402_4	4.30\|1544540\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1544540-1544571	32	NZ_CP019063	Rahnella sp. ERMR1:05 plasmid unnamed1, complete sequence	370621-370652	10	0.688
NZ_CP048402_4	4.38\|1545020\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1545020-1545051	32	MK415406	Phage FAKO27_000238F, complete genome	20729-20760	10	0.688
NZ_CP048402_4	4.41\|1545200\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1545200-1545231	32	MT478992	Escherichia phage vB_EcoS_011D2, complete genome	28513-28544	10	0.688
NZ_CP048402_4	4.41\|1545200\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1545200-1545231	32	MH102284	Salmonella phage vB_SenS_PHB07, complete genome	26494-26525	10	0.688
NZ_CP048402_4	4.44\|1545381\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1545381-1545412	32	NZ_LR215032	Mycoplasma gallopavonis strain NCTC10186 plasmid 2	402995-403026	10	0.688
NZ_CP048402_4	4.44\|1545381\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1545381-1545412	32	NZ_LR215033	Mycoplasma gallopavonis strain NCTC10186 plasmid 3	4386-4417	10	0.688
NZ_CP048402_4	4.44\|1545381\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1545381-1545412	32	NZ_LR215034	Mycoplasma gallopavonis strain NCTC10186 plasmid 4	5180-5211	10	0.688
NZ_CP048402_4	4.44\|1545381\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1545381-1545412	32	LT960552	Yersinia phage fHe-Yen9-03 genome assembly, complete genome: monopartite	83952-83983	10	0.688
NZ_CP048402_4	4.44\|1545381\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1545381-1545412	32	LR596615	Yersinia phage fHe-Yen9-04 genome assembly, chromosome: I	83611-83642	10	0.688
NZ_CP048402_4	4.44\|1545381\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1545381-1545412	32	NC_042116	Yersinia phage fHe-Yen9-04 genome assembly, complete genome: monopartite	83611-83642	10	0.688
NZ_CP048402_4	4.44\|1545381\|32\|NZ_CP048402\|CRISPRCasFinder,CRT,PILER-CR	1545381-1545412	32	MN694154	Marine virus AFVG_250M77, complete genome	22689-22720	10	0.688
NZ_CP048402_4	4.50\|1542925\|31\|NZ_CP048402\|PILER-CR	1542925-1542955	31	NC_028957	Enterobacteria phage vB_EcoM_VR26, complete genome	163036-163066	10	0.677
NZ_CP048402_4	4.50\|1542925\|31\|NZ_CP048402\|PILER-CR	1542925-1542955	31	MT446392	UNVERIFIED: Escherichia virus TH15, complete genome	13806-13836	10	0.677
NZ_CP048402_4	4.52\|1543045\|31\|NZ_CP048402\|PILER-CR	1543045-1543075	31	MK250027	Prevotella phage Lak-B8, complete genome	354376-354406	10	0.677
NZ_CP048402_4	4.52\|1543045\|31\|NZ_CP048402\|PILER-CR	1543045-1543075	31	MK250026	Prevotella phage Lak-B7, complete genome	353423-353453	10	0.677
NZ_CP048402_4	4.52\|1543045\|31\|NZ_CP048402\|PILER-CR	1543045-1543075	31	MK250023	Prevotella phage Lak-B4, complete genome	354114-354144	10	0.677
NZ_CP048402_4	4.3\|1542924\|32\|NZ_CP048402\|CRISPRCasFinder,CRT	1542924-1542955	32	MT446392	UNVERIFIED: Escherichia virus TH15, complete genome	13806-13837	11	0.656
NZ_CP048402_4	4.3\|1542924\|32\|NZ_CP048402\|CRISPRCasFinder,CRT	1542924-1542955	32	NC_028957	Enterobacteria phage vB_EcoM_VR26, complete genome	163035-163066	11	0.656
NZ_CP048402_4	4.5\|1543044\|32\|NZ_CP048402\|CRISPRCasFinder,CRT	1543044-1543075	32	MK250027	Prevotella phage Lak-B8, complete genome	354375-354406	11	0.656
NZ_CP048402_4	4.5\|1543044\|32\|NZ_CP048402\|CRISPRCasFinder,CRT	1543044-1543075	32	MK250026	Prevotella phage Lak-B7, complete genome	353422-353453	11	0.656
NZ_CP048402_4	4.5\|1543044\|32\|NZ_CP048402\|CRISPRCasFinder,CRT	1543044-1543075	32	MK250023	Prevotella phage Lak-B4, complete genome	354113-354144	11	0.656

1. spacer 1.17|31750|30|NZ_CP048402|PILER-CR,CRISPRCasFinder,CRT matches to MH238467 (Pasteurella phage Pm86, complete genome) position: , mismatch: 0, identity: 1.0

ccgccacgagattcgaactcgctatcttcc	CRISPR spacer
ccgccacgagattcgaactcgctatcttcc	Protospacer
******************************

2. spacer 4.31|1544600|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to MH238466 (Pasteurella phage AFS-2018a, complete genome) position: , mismatch: 0, identity: 1.0

tacggcttgtacagatatagaaatttgtgact	CRISPR spacer
tacggcttgtacagatatagaaatttgtgact	Protospacer
********************************

3. spacer 4.32|1544660|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to MH238466 (Pasteurella phage AFS-2018a, complete genome) position: , mismatch: 0, identity: 1.0

acggtttaatacactcattaagacagctcaaa	CRISPR spacer
acggtttaatacactcattaagacagctcaaa	Protospacer
********************************

4. spacer 1.2|30760|30|NZ_CP048402|PILER-CR,CRISPRCasFinder,CRT matches to MH238466 (Pasteurella phage AFS-2018a, complete genome) position: , mismatch: 1, identity: 0.967

caattgcacttgaacctattgatgtcactg	CRISPR spacer
caattgcacttgagcctattgatgtcactg	Protospacer
*************.****************

5. spacer 4.3|1542924|32|NZ_CP048402|CRISPRCasFinder,CRT matches to MH238467 (Pasteurella phage Pm86, complete genome) position: , mismatch: 1, identity: 0.969

caagtcatcttttgaataatgtcttggtcttt	CRISPR spacer
caagtcatcttttgagtaatgtcttggtcttt	Protospacer
***************.****************

6. spacer 4.50|1542925|31|NZ_CP048402|PILER-CR matches to MH238467 (Pasteurella phage Pm86, complete genome) position: , mismatch: 1, identity: 0.968

aagtcatcttttgaataatgtcttggtcttt	CRISPR spacer
aagtcatcttttgagtaatgtcttggtcttt	Protospacer
**************.****************

7. spacer 4.2|1542864|32|NZ_CP048402|CRISPRCasFinder,CRT matches to MH238467 (Pasteurella phage Pm86, complete genome) position: , mismatch: 2, identity: 0.938

tcttgaaagcaacagcagacaaactagcacgc	CRISPR spacer
tcttgaaagcaacagcagacaagctagcacgt	Protospacer
**********************.********.

8. spacer 4.33|1544720|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to MH238467 (Pasteurella phage Pm86, complete genome) position: , mismatch: 2, identity: 0.938

taattcccgcacttgatccgccacatccagcg	CRISPR spacer
taattcccgcacttgatctgccacatcctgcg	Protospacer
******************.********* ***

9. spacer 4.49|1542865|31|NZ_CP048402|PILER-CR matches to MH238467 (Pasteurella phage Pm86, complete genome) position: , mismatch: 2, identity: 0.935

cttgaaagcaacagcagacaaactagcacgc	CRISPR spacer
cttgaaagcaacagcagacaagctagcacgt	Protospacer
*********************.********.

10. spacer 1.7|31090|30|NZ_CP048402|PILER-CR,CRISPRCasFinder,CRT matches to MT902335 (Pasteurella phage vB_PmuP_Pa7, complete genome) position: , mismatch: 3, identity: 0.9

gcgaagacactatttgtgtagtacacccta	CRISPR spacer
gtgaagatactatttgtgtggtacacccta	Protospacer
*.*****.***********.**********

11. spacer 1.7|31090|30|NZ_CP048402|PILER-CR,CRISPRCasFinder,CRT matches to NC_047832 (Pasteurella phage PHB01, complete genome) position: , mismatch: 3, identity: 0.9

gcgaagacactatttgtgtagtacacccta	CRISPR spacer
gtgaagatactatttgtgtggtacacccta	Protospacer
*.*****.***********.**********

12. spacer 1.7|31090|30|NZ_CP048402|PILER-CR,CRISPRCasFinder,CRT matches to NC_047831 (Pasteurella phage PHB02, complete genome) position: , mismatch: 3, identity: 0.9

gcgaagacactatttgtgtagtacacccta	CRISPR spacer
gtgaagatactatttgtgtggtacacccta	Protospacer
*.*****.***********.**********

13. spacer 1.5|30958|30|NZ_CP048402|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019553 (Athalassotoga saccharophila strain NAS-01 plasmid pATS2, complete sequence) position: , mismatch: 5, identity: 0.833

taatttataagtcatatatgaactccatat	CRISPR spacer
gaatttataagtcatatatgaattcattaa	Protospacer
 *********************.**  **

14. spacer 4.16|1543705|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to MN855800 (Bacteriophage sp. isolate 98, complete genome) position: , mismatch: 5, identity: 0.844

acgggggta-cccttacttaaattgaggtgggt	CRISPR spacer
-tgggtataccccttacttaaattgagatgggt	Protospacer
 .*** .** *****************.*****

15. spacer 4.29|1544480|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to MN855800 (Bacteriophage sp. isolate 98, complete genome) position: , mismatch: 5, identity: 0.844

acgggggta-cccttacttaaattgaggtgggt	CRISPR spacer
-tgggtataccccttacttaaattgagatgggt	Protospacer
 .*** .** *****************.*****

16. spacer 1.3|30826|30|NZ_CP048402|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032813 (Escherichia coli strain ERL03-1416 plasmid pERL03-1416-2, complete sequence) position: , mismatch: 6, identity: 0.8

aaccgcagcgataaagttatttgttaagta	CRISPR spacer
aaccgcagcgataaagttatttttacgatt	Protospacer
********************** *  ..*

17. spacer 1.6|31024|30|NZ_CP048402|PILER-CR,CRISPRCasFinder,CRT matches to AP014217 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C88-MedDCM-OCT-S36-C169, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 6, identity: 0.8

caatagttcttgcaatcatttcaacaatat	CRISPR spacer
caatagttcttgcaatcgttccatccgcat	Protospacer
*****************.**.** * ..**

18. spacer 4.44|1545381|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050445 (Tolypothrix sp. PCC 7910 plasmid unnamed5, complete sequence) position: , mismatch: 6, identity: 0.812

gctttgctgttgataaatatctt-gcattgtta	CRISPR spacer
gctttgctgatgataaatttcttgggagtgct-	Protospacer
********* ******** **** * * **.*

19. spacer 1.2|30760|30|NZ_CP048402|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030201 (Salmonella enterica strain SA20051401 plasmid pSA20051401.5, complete sequence) position: , mismatch: 7, identity: 0.767

caattgcacttgaacctattgatgtcactg	CRISPR spacer
aaattgcacttgaacttattgaagtaagat	Protospacer
 **************.****** ** *

20. spacer 1.3|30826|30|NZ_CP048402|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024864 (Escherichia coli strain AR_0015 plasmid unitig_2_pilon, complete sequence) position: , mismatch: 7, identity: 0.767

aaccgcagcgataaagttatttgttaagta	CRISPR spacer
aactgcagcgataaagttatttttacgatt	Protospacer
***.****************** *  ..*

21. spacer 1.3|30826|30|NZ_CP048402|PILER-CR,CRISPRCasFinder,CRT matches to NC_011413 (Escherichia coli SE11 plasmid pSE11-2, complete sequence) position: , mismatch: 7, identity: 0.767

aaccgcagcgataaagttatttgttaagta	CRISPR spacer
aatcgcagcgataaagttatttttacgatt	Protospacer
**.******************* *  ..*

22. spacer 1.3|30826|30|NZ_CP048402|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030785 (Escherichia albertii strain 2012EL-1823B plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.767

aaccgcagcgataaagttatttgttaagta	CRISPR spacer
aatcgcagcgataaagttatttttacgatt	Protospacer
**.******************* *  ..*

23. spacer 1.3|30826|30|NZ_CP048402|PILER-CR,CRISPRCasFinder,CRT matches to CP054565 (Escherichia coli strain SCU-478 isolate rectal swab from healthy college student plasmid pSCU-478-1, complete sequence) position: , mismatch: 7, identity: 0.767

aaccgcagcgataaagttatttgttaagta	CRISPR spacer
aatcgcagcgataaagttatttttacgatt	Protospacer
**.******************* *  ..*

24. spacer 1.3|30826|30|NZ_CP048402|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010201 (Escherichia coli strain M10 plasmid A, complete sequence) position: , mismatch: 7, identity: 0.767

aaccgcagcgataaagttatttgttaagta	CRISPR spacer
aatcgcagcgataaagttatttttacgatt	Protospacer
**.******************* *  ..*

25. spacer 1.3|30826|30|NZ_CP048402|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 7, identity: 0.767

aaccgcagcgataaagttatttgttaagta	CRISPR spacer
aaagtaaacgaaaaagttatttgttaagtt	Protospacer
**    *.*** *****************

26. spacer 1.17|31750|30|NZ_CP048402|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021334 (Marinobacter salarius strain HL2708#2 plasmid pHL2708Z5, complete sequence) position: , mismatch: 7, identity: 0.767

ccgccacgagattcgaactcgctatcttcc	CRISPR spacer
ccgccgcgagattcgaactctctcagctct	Protospacer
*****.************** **   .**.

27. spacer 3.5|300841|32|NZ_CP048402|PILER-CR,CRISPRCasFinder,CRT matches to KU686195 (Synechococcus phage S-CAM1 isolate 0810SB17, complete genome) position: , mismatch: 7, identity: 0.781

gtttgagtcgaagttatttgtctgattaatca	CRISPR spacer
gattgagtcgaagtgatttttctgattctaga	Protospacer
* ************ **** *******    *

28. spacer 3.5|300841|32|NZ_CP048402|PILER-CR,CRISPRCasFinder,CRT matches to AP014499 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S27-C8, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces) position: , mismatch: 7, identity: 0.781

gtttgagtcgaagttatttgtctgattaatca	CRISPR spacer
gattgagtcgaagtgatttttctgattctaga	Protospacer
* ************ **** *******    *

29. spacer 3.5|300841|32|NZ_CP048402|PILER-CR,CRISPRCasFinder,CRT matches to KU686193 (Synechococcus phage S-CAM1 isolate 0310NB17, complete genome) position: , mismatch: 7, identity: 0.781

gtttgagtcgaagttatttgtctgattaatca	CRISPR spacer
gattgagtcgaagtgatttttctgattctaga	Protospacer
* ************ **** *******    *

30. spacer 3.5|300841|32|NZ_CP048402|PILER-CR,CRISPRCasFinder,CRT matches to HQ634177 (Synechococcus phage S-CAM1 genomic sequence) position: , mismatch: 7, identity: 0.781

gtttgagtcgaagttatttgtctgattaatca	CRISPR spacer
gattgagtcgaagtgatttttctgattctaga	Protospacer
* ************ **** *******    *

31. spacer 3.5|300841|32|NZ_CP048402|PILER-CR,CRISPRCasFinder,CRT matches to KU686194 (Synechococcus phage S-CAM1 isolate 0809CC03, complete genome) position: , mismatch: 7, identity: 0.781

gtttgagtcgaagttatttgtctgattaatca	CRISPR spacer
gattgagtcgaagtgatttttctgattctaga	Protospacer
* ************ **** *******    *

32. spacer 3.5|300841|32|NZ_CP048402|PILER-CR,CRISPRCasFinder,CRT matches to KU686196 (Synechococcus phage S-CAM1 isolate 0910CC29, complete genome) position: , mismatch: 7, identity: 0.781

gtttgagtcgaagttatttgtctgattaatca	CRISPR spacer
gattgagtcgaagtgatttttctgattctaga	Protospacer
* ************ **** *******    *

33. spacer 3.5|300841|32|NZ_CP048402|PILER-CR,CRISPRCasFinder,CRT matches to KU686192 (Synechococcus phage S-CAM1 isolate 0309SB33, complete genome) position: , mismatch: 7, identity: 0.781

gtttgagtcgaagttatttgtctgattaatca	CRISPR spacer
gattgagtcgaagtgatttttctgattctaga	Protospacer
* ************ **** *******    *

34. spacer 4.1|1542804|32|NZ_CP048402|CRISPRCasFinder,CRT matches to KM606997 (Enterobacteria phage RB7, complete genome) position: , mismatch: 7, identity: 0.781

gaaataacgcttgagaaaatcaataacagact	CRISPR spacer
aatagagcgcttgagcaaatcaataagagagt	Protospacer
.* * *.******** ********** *** *

35. spacer 4.1|1542804|32|NZ_CP048402|CRISPRCasFinder,CRT matches to KM606998 (Enterobacteria phage RB9, complete genome) position: , mismatch: 7, identity: 0.781

gaaataacgcttgagaaaatcaataacagact	CRISPR spacer
aatagagcgcttgagcaaatcaataagagagt	Protospacer
.* * *.******** ********** *** *

36. spacer 4.3|1542924|32|NZ_CP048402|CRISPRCasFinder,CRT matches to MN692977 (Marine virus AFVG_117M37, complete genome) position: , mismatch: 7, identity: 0.781

caagtca--tcttttgaataatgtcttggtcttt	CRISPR spacer
--atttaatttttttgaatgacgtcttggtcttt	Protospacer
  * *.*  *.********.*.************

37. spacer 4.6|1543104|32|NZ_CP048402|CRISPRCasFinder,CRT matches to NZ_CP049159 (Caballeronia sp. SBC1 plasmid pSBC1_3, complete sequence) position: , mismatch: 7, identity: 0.781

ttgcagtaattacgattgcggtaatgattgca	CRISPR spacer
aaatagtactgacgattgcggtaatgattgcg	Protospacer
  ..**** * ********************.

38. spacer 4.6|1543104|32|NZ_CP048402|CRISPRCasFinder,CRT matches to NZ_CP049320 (Caballeronia sp. SBC2 plasmid pSBC2-4, complete sequence) position: , mismatch: 7, identity: 0.781

ttgcagtaattacgattgcggtaatgattgca	CRISPR spacer
aaatagtactgacgattgcggtaatgattgcg	Protospacer
  ..**** * ********************.

39. spacer 4.13|1543525|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to MN856069 (Bacteriophage sp. isolate 102, complete genome) position: , mismatch: 7, identity: 0.781

ttgatttatctcattttcagttgctggcccta-	CRISPR spacer
atcatttgtcttattttcagttgct-gctgtac	Protospacer
 * ****.***.************* **. **

40. spacer 4.21|1544005|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to MK250029 (Prevotella phage Lak-C1, complete genome) position: , mismatch: 7, identity: 0.781

tttcttctaaaatattaaaattcaaaatcaaa	CRISPR spacer
tattaactaaaatattaaaattaaaaattaat	Protospacer
* *.  **************** *****.**

41. spacer 4.21|1544005|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to MK250016 (Prevotella phage Lak-A1, complete genome) position: , mismatch: 7, identity: 0.781

tttcttctaaaatattaaaattcaaaatcaaa	CRISPR spacer
tattaactaaaatattaaaattaaaaattaat	Protospacer
* *.  **************** *****.**

42. spacer 4.21|1544005|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to MK250019 (Prevotella phage Lak-A2, complete genome) position: , mismatch: 7, identity: 0.781

tttcttctaaaatattaaaattcaaaatcaaa	CRISPR spacer
tattaactaaaatattaaaattaaaaattaat	Protospacer
* *.  **************** *****.**

43. spacer 4.21|1544005|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to NC_014824 (Ruminococcus albus 7 = DSM 20455 plasmid pRUMAL01, complete sequence) position: , mismatch: 7, identity: 0.781

tttcttctaaaatattaaaattcaaaatcaaa	CRISPR spacer
tttcttctaaaacatcaaaattcattagataa	Protospacer
************.**.********  *   **

44. spacer 4.21|1544005|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 7, identity: 0.781

tttcttctaaaatattaaaattcaaaatcaaa	CRISPR spacer
tattttctaaaatattaaatttaaaaaataag	Protospacer
* *.*************** ** **** .**.

45. spacer 4.33|1544720|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to MK494110 (Mycobacterium phage SwagPigglett, complete genome) position: , mismatch: 7, identity: 0.781

taattcccgcacttgatccgccacatccagcg	CRISPR spacer
gtagttcggcacgtcatccgccacatccagcg	Protospacer
  * *.* **** * *****************

46. spacer 4.33|1544720|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to MH155865 (Mycobacterium phage BobaPhett, complete genome) position: , mismatch: 7, identity: 0.781

taattcccgcacttgatccgccacatccagcg	CRISPR spacer
gtagttcggcacgtcatccgccacatccagcg	Protospacer
  * *.* **** * *****************

47. spacer 4.33|1544720|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to KR997968 (Mycobacterium phage Quico, complete genome) position: , mismatch: 7, identity: 0.781

taattcccgcacttgatccgccacatccagcg	CRISPR spacer
gtagttcggcacgtcatccgccacatccagcg	Protospacer
  * *.* **** * *****************

48. spacer 4.33|1544720|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to MK524517 (Mycobacterium phage James, complete genome) position: , mismatch: 7, identity: 0.781

taattcccgcacttgatccgccacatccagcg	CRISPR spacer
gtagttcggcacgtcatccgccacatccagcg	Protospacer
  * *.* **** * *****************

49. spacer 4.33|1544720|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to MT310893 (Mycobacterium phage DRBy19, complete genome) position: , mismatch: 7, identity: 0.781

taattcccgcacttgatccgccacatccagcg	CRISPR spacer
gtagttcggcacgtcatccgccacatccagcg	Protospacer
  * *.* **** * *****************

50. spacer 4.33|1544720|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to MH399771 (Mycobacterium phage ByChance, complete genome) position: , mismatch: 7, identity: 0.781

taattcccgcacttgatccgccacatccagcg	CRISPR spacer
gtagttcggcacgtcatccgccacatccagcg	Protospacer
  * *.* **** * *****************

51. spacer 4.33|1544720|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to KJ025956 (Mycobacterium phage Saal, complete genome) position: , mismatch: 7, identity: 0.781

taattcccgcacttgatccgccacatccagcg	CRISPR spacer
gtagttcggcacgtcatccgccacatccagcg	Protospacer
  * *.* **** * *****************

52. spacer 4.33|1544720|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to MH590602 (Mycobacterium phage Gorge, complete genome) position: , mismatch: 7, identity: 0.781

taattcccgcacttgatccgccacatccagcg	CRISPR spacer
gtagttcggcacgtcatccgccacatccagcg	Protospacer
  * *.* **** * *****************

53. spacer 4.33|1544720|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to KR997930 (Mycobacterium phage Florinda, complete genome) position: , mismatch: 7, identity: 0.781

taattcccgcacttgatccgccacatccagcg	CRISPR spacer
gtagttcggcacgtcatccgccacatccagcg	Protospacer
  * *.* **** * *****************

54. spacer 4.33|1544720|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to MH155871 (Mycobacterium phage Mattes, complete genome) position: , mismatch: 7, identity: 0.781

taattcccgcacttgatccgccacatccagcg	CRISPR spacer
gtagttcggcacgtcatccgccacatccagcg	Protospacer
  * *.* **** * *****************

55. spacer 4.38|1545020|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP028515 (Carboxydocella thermautotrophica strain 041T plasmid pCCELLA01, complete sequence) position: , mismatch: 7, identity: 0.781

taaaattgacacaagaacaattaggggcaatt--	CRISPR spacer
taaaaatgacacaagaagaatta--gctaatcat	Protospacer
***** *********** *****  * .***.

56. spacer 4.44|1545381|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR214939 (Mycoplasma salivarium strain NCTC10113 plasmid 2) position: , mismatch: 7, identity: 0.781

gctttgctgttgataaatatcttgca-ttgtta	CRISPR spacer
ctgttgatgttgataaatattttgcagatgtt-	Protospacer
 . *** *************.*****  ****

57. spacer 4.44|1545381|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to MG209611 (Aphanizomenon phage vB_AphaS-CL131, complete genome) position: , mismatch: 7, identity: 0.781

gctttgctg----ttgataaatatcttgcattgtta	CRISPR spacer
----tgctaacgcttgatccatatcttgcattgtta	Protospacer
    ****.    *****  ****************

58. spacer 4.46|1545501|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to CP000876 (Herpetosiphon aurantiacus DSM 785 plasmid pHAU01, complete sequence) position: , mismatch: 7, identity: 0.781

cttcacgattgccaaatggacgttttaaaaac	CRISPR spacer
gagcacgattgacaaatcgacgttttaaatcc	Protospacer
   ******** ***** ***********  *

59. spacer 4.49|1542865|31|NZ_CP048402|PILER-CR matches to NC_019699 (Chroococcidiopsis thermalis PCC 7203 plasmid pCHRO.01, complete sequence) position: , mismatch: 7, identity: 0.774

cttgaaagcaacagcagacaaactagcacgc	CRISPR spacer
attgaaagcaagagcagacaaactcagtcgg	Protospacer
 ********** ************ .  **

60. spacer 4.50|1542925|31|NZ_CP048402|PILER-CR matches to NC_001884 (Bacillus phage SPBc2, complete genome) position: , mismatch: 7, identity: 0.774

aagtcatcttttgaataatgtcttggtcttt	CRISPR spacer
cagtcaacttttgaatactgtcttgtctttc	Protospacer
 ***** ********** ******* ..**.

61. spacer 4.50|1542925|31|NZ_CP048402|PILER-CR matches to AF020713 (Bacteriophage SPBc2 complete genome) position: , mismatch: 7, identity: 0.774

aagtcatcttttgaataatgtcttggtcttt	CRISPR spacer
cagtcaacttttgaatactgtcttgtctttc	Protospacer
 ***** ********** ******* ..**.

62. spacer 4.50|1542925|31|NZ_CP048402|PILER-CR matches to MT366946 (Bacillus phage Hyb1phi3Ts-SPbeta, complete genome) position: , mismatch: 7, identity: 0.774

aagtcatcttttgaataatgtcttggtcttt	CRISPR spacer
cagtcaacttttgaatactgtcttgtctttc	Protospacer
 ***** ********** ******* ..**.

63. spacer 4.50|1542925|31|NZ_CP048402|PILER-CR matches to NZ_CP032824 (Arcobacter cryaerophilus ATCC 43158 plasmid pACRY43158, complete sequence) position: , mismatch: 7, identity: 0.774

aagtcatcttttgaataatgtcttggtcttt	CRISPR spacer
aatatctcttttgaataatgtcttgatttta	Protospacer
**  . *******************.*.**

64. spacer 4.50|1542925|31|NZ_CP048402|PILER-CR matches to NZ_MK715471 (Arcobacter cryaerophilus strain M830MA plasmid pM830MA, complete sequence) position: , mismatch: 7, identity: 0.774

aagtcatcttttgaataatgtcttggtcttt	CRISPR spacer
aatatctcttttgaataatgtcttgatttta	Protospacer
**  . *******************.*.**

65. spacer 4.50|1542925|31|NZ_CP048402|PILER-CR matches to MN692977 (Marine virus AFVG_117M37, complete genome) position: , mismatch: 7, identity: 0.774

aagtca--tcttttgaataatgtcttggtcttt	CRISPR spacer
--tttaatttttttgaatgacgtcttggtcttt	Protospacer
   *.*  *.********.*.************

66. spacer 4.52|1543045|31|NZ_CP048402|PILER-CR matches to MG640035 (Vibrio phage Athena1, complete genome) position: , mismatch: 7, identity: 0.774

attccttattcatctttaatttccgaaaatg	CRISPR spacer
acctgtttatcatctttaatttcagaaaatg	Protospacer
*... **  ************** *******

67. spacer 4.52|1543045|31|NZ_CP048402|PILER-CR matches to NZ_CP015809 (Borrelia mayonii strain MN14-1539 plasmid lp54) position: , mismatch: 7, identity: 0.774

attccttattcatctttaatttccgaaaatg	CRISPR spacer
atgatttattcatctttaaattacgaaacag	Protospacer
**  .************** ** *****  *

68. spacer 4.52|1543045|31|NZ_CP048402|PILER-CR matches to NZ_CP015795 (Borrelia mayonii strain MN14-1420 plasmid lp54, complete sequence) position: , mismatch: 7, identity: 0.774

attccttattcatctttaatttccgaaaatg	CRISPR spacer
atgatttattcatctttaaattacgaaacag	Protospacer
**  .************** ** *****  *

69. spacer 1.6|31024|30|NZ_CP048402|PILER-CR,CRISPRCasFinder,CRT matches to MG592435 (Vibrio phage 1.055.O._10N.286.55.E9, partial genome) position: , mismatch: 8, identity: 0.733

caatagttcttgcaatcatttcaacaatat	CRISPR spacer
gcttggttttagcaatcatttcaacaatta	Protospacer
   *.***.* *****************

70. spacer 1.6|31024|30|NZ_CP048402|PILER-CR,CRISPRCasFinder,CRT matches to MG592432 (Vibrio phage 1.050.O._10N.286.48.A6, partial genome) position: , mismatch: 8, identity: 0.733

caatagttcttgcaatcatttcaacaatat	CRISPR spacer
gcttggttttagcaatcatttcaacaatta	Protospacer
   *.***.* *****************

71. spacer 1.6|31024|30|NZ_CP048402|PILER-CR,CRISPRCasFinder,CRT matches to MG592431 (Vibrio phage 1.049.O._10N.286.54.B5, partial genome) position: , mismatch: 8, identity: 0.733

caatagttcttgcaatcatttcaacaatat	CRISPR spacer
gcttggttttagcaatcatttcaacaatta	Protospacer
   *.***.* *****************

72. spacer 1.6|31024|30|NZ_CP048402|PILER-CR,CRISPRCasFinder,CRT matches to MT254578 (Bacillus phage Izhevsk, complete genome) position: , mismatch: 8, identity: 0.733

caatagttcttgcaatcatttcaacaatat	CRISPR spacer
tatcagttcttccaatcatttcaacggaag	Protospacer
.* .******* *************.. *

73. spacer 1.13|31486|30|NZ_CP048402|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012912 (Streptococcus suis strain NSUI060 plasmid pNSUI060a, complete sequence) position: , mismatch: 8, identity: 0.733

tggggaattagtgatttttcaaagctagaa	CRISPR spacer
agtctctttagtgatttttcaaagtcagaa	Protospacer
 *     *****************..****

74. spacer 1.13|31486|30|NZ_CP048402|PILER-CR,CRISPRCasFinder,CRT matches to MK448542 (Streptococcus satellite phage Javan560, complete genome) position: , mismatch: 8, identity: 0.733

tggggaattagtgatttttcaaagctagaa	CRISPR spacer
agtctctttagtgatttttcaaagtcagaa	Protospacer
 *     *****************..****

75. spacer 1.13|31486|30|NZ_CP048402|PILER-CR,CRISPRCasFinder,CRT matches to MK448560 (Streptococcus satellite phage Javan598, complete genome) position: , mismatch: 8, identity: 0.733

tggggaattagtgatttttcaaagctagaa	CRISPR spacer
agtctctttagtgatttttcaaagtcagaa	Protospacer
 *     *****************..****

76. spacer 1.16|31684|30|NZ_CP048402|PILER-CR,CRISPRCasFinder,CRT matches to MK368614 (Vibrio phage 2 TSL-2019, complete genome) position: , mismatch: 8, identity: 0.733

aagtccaaacaagagattctgcgattaagt	CRISPR spacer
aagtccaaagaagagattctgaagtactat	Protospacer
********* *********** ..*   .*

77. spacer 1.17|31750|30|NZ_CP048402|PILER-CR,CRISPRCasFinder,CRT matches to NC_021796 (Cellulophaga phage phi38:1, complete genome) position: , mismatch: 8, identity: 0.733

ccgccacgagattcgaactcgctatcttcc	CRISPR spacer
gtaagacgaggttcgaactcgctatctcct	Protospacer
 ..  *****.****************.*.

78. spacer 1.17|31750|30|NZ_CP048402|PILER-CR,CRISPRCasFinder,CRT matches to KC821612 (Cellulophaga phage phi40:1, complete genome) position: , mismatch: 8, identity: 0.733

ccgccacgagattcgaactcgctatcttcc	CRISPR spacer
gtaagacgaggttcgaactcgctatctcct	Protospacer
 ..  *****.****************.*.

79. spacer 1.17|31750|30|NZ_CP048402|PILER-CR,CRISPRCasFinder,CRT matches to NC_021560 (Rhizobium phage RR1-A genomic sequence) position: , mismatch: 8, identity: 0.733

ccgccacgagattcgaactcgctatcttcc	CRISPR spacer
cggaggcgagattcgaactcgcgatctcgt	Protospacer
* *  .**************** ****. .

80. spacer 4.2|1542864|32|NZ_CP048402|CRISPRCasFinder,CRT matches to NC_019699 (Chroococcidiopsis thermalis PCC 7203 plasmid pCHRO.01, complete sequence) position: , mismatch: 8, identity: 0.75

tcttgaaagcaacagcagacaaactagcacgc	CRISPR spacer
aattgaaagcaagagcagacaaactcagtcgg	Protospacer
  ********** ************ .  **

81. spacer 4.3|1542924|32|NZ_CP048402|CRISPRCasFinder,CRT matches to NZ_CP032824 (Arcobacter cryaerophilus ATCC 43158 plasmid pACRY43158, complete sequence) position: , mismatch: 8, identity: 0.75

caagtcatcttttgaataatgtcttggtcttt	CRISPR spacer
taatatctcttttgaataatgtcttgatttta	Protospacer
.**  . *******************.*.**

82. spacer 4.3|1542924|32|NZ_CP048402|CRISPRCasFinder,CRT matches to NZ_MK715471 (Arcobacter cryaerophilus strain M830MA plasmid pM830MA, complete sequence) position: , mismatch: 8, identity: 0.75

caagtcatcttttgaataatgtcttggtcttt	CRISPR spacer
taatatctcttttgaataatgtcttgatttta	Protospacer
.**  . *******************.*.**

83. spacer 4.3|1542924|32|NZ_CP048402|CRISPRCasFinder,CRT matches to NC_001884 (Bacillus phage SPBc2, complete genome) position: , mismatch: 8, identity: 0.75

caagtcatcttttgaataatgtcttggtcttt	CRISPR spacer
tcagtcaacttttgaatactgtcttgtctttc	Protospacer
. ***** ********** ******* ..**.

84. spacer 4.3|1542924|32|NZ_CP048402|CRISPRCasFinder,CRT matches to AF020713 (Bacteriophage SPBc2 complete genome) position: , mismatch: 8, identity: 0.75

caagtcatcttttgaataatgtcttggtcttt	CRISPR spacer
tcagtcaacttttgaatactgtcttgtctttc	Protospacer
. ***** ********** ******* ..**.

85. spacer 4.3|1542924|32|NZ_CP048402|CRISPRCasFinder,CRT matches to MT366946 (Bacillus phage Hyb1phi3Ts-SPbeta, complete genome) position: , mismatch: 8, identity: 0.75

caagtcatcttttgaataatgtcttggtcttt	CRISPR spacer
tcagtcaacttttgaatactgtcttgtctttc	Protospacer
. ***** ********** ******* ..**.

86. spacer 4.3|1542924|32|NZ_CP048402|CRISPRCasFinder,CRT matches to NZ_CP013040 (Clostridium perfringens strain JP838 plasmid pJFP838C, complete sequence) position: , mismatch: 8, identity: 0.75

caagtcatcttttgaataatgtcttggtcttt	CRISPR spacer
ccagtaatcttttgaataatttctttctgtaa	Protospacer
* *** ************** ****  * *

87. spacer 4.3|1542924|32|NZ_CP048402|CRISPRCasFinder,CRT matches to NZ_KT020842 (Clostridium perfringens strain JP838 plasmid pJP838B, complete sequence) position: , mismatch: 8, identity: 0.75

caagtcatcttttgaataatgtcttggtcttt	CRISPR spacer
ccagtaatcttttgaataatttctttctgtaa	Protospacer
* *** ************** ****  * *

88. spacer 4.3|1542924|32|NZ_CP048402|CRISPRCasFinder,CRT matches to NC_011412 (Clostridium perfringens plasmid pCP8533etx, complete sequence) position: , mismatch: 8, identity: 0.75

caagtcatcttttgaataatgtcttggtcttt	CRISPR spacer
ccagtaatcttttgaataatttctttctgtaa	Protospacer
* *** ************** ****  * *

89. spacer 4.3|1542924|32|NZ_CP048402|CRISPRCasFinder,CRT matches to NZ_CP009558 (Clostridium perfringens strain FORC_003 plasmid pFORC3, complete sequence) position: , mismatch: 8, identity: 0.75

caagtcatcttttgaataatgtcttggtcttt	CRISPR spacer
ccagtaatcttttgaataatttctttctgtaa	Protospacer
* *** ************** ****  * *

90. spacer 4.3|1542924|32|NZ_CP048402|CRISPRCasFinder,CRT matches to NZ_CP023413 (Clostridium perfringens strain LLY_N11 plasmid pLLY_N11_3, complete sequence) position: , mismatch: 8, identity: 0.75

caagtcatcttttgaataatgtcttggtcttt	CRISPR spacer
ccagtaatcttttgaataatttctttctgtaa	Protospacer
* *** ************** ****  * *

91. spacer 4.3|1542924|32|NZ_CP048402|CRISPRCasFinder,CRT matches to NC_007772 (Clostridium perfringens CPE str. F4969 plasmid pCPF4969, complete sequence) position: , mismatch: 8, identity: 0.75

caagtcatcttttgaataatgtcttggtcttt	CRISPR spacer
ccagtaatcttttgaataatttctttctgtaa	Protospacer
* *** ************** ****  * *

92. spacer 4.3|1542924|32|NZ_CP048402|CRISPRCasFinder,CRT matches to NC_007773 (Clostridium perfringens plasmid pCPF5603, complete sequence) position: , mismatch: 8, identity: 0.75

caagtcatcttttgaataatgtcttggtcttt	CRISPR spacer
ccagtaatcttttgaataatttctttctgtaa	Protospacer
* *** ************** ****  * *

93. spacer 4.5|1543044|32|NZ_CP048402|CRISPRCasFinder,CRT matches to NZ_CP015809 (Borrelia mayonii strain MN14-1539 plasmid lp54) position: , mismatch: 8, identity: 0.75

tattccttattcatctttaatttccgaaaatg	CRISPR spacer
aatgatttattcatctttaaattacgaaacag	Protospacer
 **  .************** ** *****  *

94. spacer 4.5|1543044|32|NZ_CP048402|CRISPRCasFinder,CRT matches to NZ_CP015795 (Borrelia mayonii strain MN14-1420 plasmid lp54, complete sequence) position: , mismatch: 8, identity: 0.75

tattccttattcatctttaatttccgaaaatg	CRISPR spacer
aatgatttattcatctttaaattacgaaacag	Protospacer
 **  .************** ** *****  *

95. spacer 4.7|1543164|32|NZ_CP048402|CRISPRCasFinder,CRT matches to LC168164 (Tenacibaculum phage pT24 DNA, complete genome) position: , mismatch: 8, identity: 0.75

gtaaactgtttatttaagctatttttaggaaa	CRISPR spacer
aaaaatgacttatttaagccatttttatgaaa	Protospacer
. ***. ..**********.******* ****

96. spacer 4.21|1544005|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to NC_031121 (Bacillus phage Aurora, complete genome) position: , mismatch: 8, identity: 0.75

tttcttctaaaatattaaaattcaaaatcaaa	CRISPR spacer
aaagatttaaaagattaaaattcaagatcaaa	Protospacer
     *.***** ************.******

97. spacer 4.21|1544005|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009119 (Borreliella valaisiana Tom4006 plasmid lp54, complete sequence) position: , mismatch: 8, identity: 0.75

tttcttctaaaatattaaaattcaaaatcaaa	CRISPR spacer
cctttattaaaatattaaaatttaaattcaat	Protospacer
..*.* .***************.*** ****

98. spacer 4.21|1544005|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to MN693791 (Marine virus AFVG_250M854, complete genome) position: , mismatch: 8, identity: 0.75

tttcttctaaaatattaaaattcaaaatcaaa	CRISPR spacer
tttcttttaaaatatgaaaattctagcgcact	Protospacer
******.******** ******* *.  **

99. spacer 4.30|1544540|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045351 (Vibrio sp. THAF100 plasmid pTHAF100_a, complete sequence) position: , mismatch: 8, identity: 0.75

tgatttgcatgaaaaaaataacgatttctagc	CRISPR spacer
gcattgcgatgataaaaataacgatatctaga	Protospacer
  ***   **** ************ *****

100. spacer 4.38|1545020|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045731 (Lactobacillus gastricus strain LG045 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

taaaattgacacaagaacaattaggggcaatt	CRISPR spacer
aaagattgactcaagaacaattagctgaaaag	Protospacer
 **.****** *************  * **

101. spacer 4.50|1542925|31|NZ_CP048402|PILER-CR matches to NC_007773 (Clostridium perfringens plasmid pCPF5603, complete sequence) position: , mismatch: 8, identity: 0.742

aagtcatcttttgaataatgtcttggtcttt	CRISPR spacer
cagtaatcttttgaataatttctttctgtaa	Protospacer
 *** ************** ****  * *

102. spacer 4.50|1542925|31|NZ_CP048402|PILER-CR matches to NZ_CP013040 (Clostridium perfringens strain JP838 plasmid pJFP838C, complete sequence) position: , mismatch: 8, identity: 0.742

aagtcatcttttgaataatgtcttggtcttt	CRISPR spacer
cagtaatcttttgaataatttctttctgtaa	Protospacer
 *** ************** ****  * *

103. spacer 4.50|1542925|31|NZ_CP048402|PILER-CR matches to NZ_KT020842 (Clostridium perfringens strain JP838 plasmid pJP838B, complete sequence) position: , mismatch: 8, identity: 0.742

aagtcatcttttgaataatgtcttggtcttt	CRISPR spacer
cagtaatcttttgaataatttctttctgtaa	Protospacer
 *** ************** ****  * *

104. spacer 4.50|1542925|31|NZ_CP048402|PILER-CR matches to NC_011412 (Clostridium perfringens plasmid pCP8533etx, complete sequence) position: , mismatch: 8, identity: 0.742

aagtcatcttttgaataatgtcttggtcttt	CRISPR spacer
cagtaatcttttgaataatttctttctgtaa	Protospacer
 *** ************** ****  * *

105. spacer 4.50|1542925|31|NZ_CP048402|PILER-CR matches to NZ_CP009558 (Clostridium perfringens strain FORC_003 plasmid pFORC3, complete sequence) position: , mismatch: 8, identity: 0.742

aagtcatcttttgaataatgtcttggtcttt	CRISPR spacer
cagtaatcttttgaataatttctttctgtaa	Protospacer
 *** ************** ****  * *

106. spacer 4.50|1542925|31|NZ_CP048402|PILER-CR matches to NZ_CP023413 (Clostridium perfringens strain LLY_N11 plasmid pLLY_N11_3, complete sequence) position: , mismatch: 8, identity: 0.742

aagtcatcttttgaataatgtcttggtcttt	CRISPR spacer
cagtaatcttttgaataatttctttctgtaa	Protospacer
 *** ************** ****  * *

107. spacer 4.50|1542925|31|NZ_CP048402|PILER-CR matches to NC_007772 (Clostridium perfringens CPE str. F4969 plasmid pCPF4969, complete sequence) position: , mismatch: 8, identity: 0.742

aagtcatcttttgaataatgtcttggtcttt	CRISPR spacer
cagtaatcttttgaataatttctttctgtaa	Protospacer
 *** ************** ****  * *

108. spacer 4.52|1543045|31|NZ_CP048402|PILER-CR matches to NC_006129 (Borreliella bavariensis PBi plasmid lp54, complete sequence) position: , mismatch: 8, identity: 0.742

attccttattcatctttaatttccgaaaatg	CRISPR spacer
acaatttattcatctttaaattacgaaaaac	Protospacer
*.  .************** ** ******

109. spacer 4.52|1543045|31|NZ_CP048402|PILER-CR matches to NC_017804 (Borreliella garinii BgVir plasmid lp54, complete sequence) position: , mismatch: 8, identity: 0.742

attccttattcatctttaatttccgaaaatg	CRISPR spacer
acaatttattcatctttaaattacgaaaaac	Protospacer
*.  .************** ** ******

110. spacer 1.3|30826|30|NZ_CP048402|PILER-CR,CRISPRCasFinder,CRT matches to MK448885 (Streptococcus phage Javan252, complete genome) position: , mismatch: 9, identity: 0.7

aaccgcagcgataaagttatttgttaagta	CRISPR spacer
caccgcagcgacaaagttattagtctctat	Protospacer
 **********.********* **.

111. spacer 1.6|31024|30|NZ_CP048402|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP036488 (Rahnella aquatilis strain MEM40 plasmid pMEM40-1, complete sequence) position: , mismatch: 9, identity: 0.7

caatagttcttgcaatcatttcaacaatat	CRISPR spacer
tgccccttcttgcactcatttcaaaaatac	Protospacer
.. .  ******** ********* ****.

112. spacer 1.6|31024|30|NZ_CP048402|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032297 (Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence) position: , mismatch: 9, identity: 0.7

caatagttcttgcaatcatttcaacaatat	CRISPR spacer
tgccccttcttgcactcatttcaaaaatac	Protospacer
.. .  ******** ********* ****.

113. spacer 1.6|31024|30|NZ_CP048402|PILER-CR,CRISPRCasFinder,CRT matches to NC_017060 (Rahnella aquatilis HX2 plasmid PRA1, complete sequence) position: , mismatch: 9, identity: 0.7

caatagttcttgcaatcatttcaacaatat	CRISPR spacer
tgccccttcttgcactcatttcaaaaatac	Protospacer
.. .  ******** ********* ****.

114. spacer 1.6|31024|30|NZ_CP048402|PILER-CR,CRISPRCasFinder,CRT matches to NC_015062 (Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequence) position: , mismatch: 9, identity: 0.7

caatagttcttgcaatcatttcaacaatat	CRISPR spacer
tgccccttcttgcactcatttcaaaaatac	Protospacer
.. .  ******** ********* ****.

115. spacer 1.6|31024|30|NZ_CP048402|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034838 (Rahnella aquatilis strain KM12 plasmid pKM12v1, complete sequence) position: , mismatch: 9, identity: 0.7

caatagttcttgcaatcatttcaacaatat	CRISPR spacer
tgccccttcttgcactcatttcaaaaatac	Protospacer
.. .  ******** ********* ****.

116. spacer 1.6|31024|30|NZ_CP048402|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034839 (Rahnella aquatilis strain KM25 plasmid pKM12v2, complete sequence) position: , mismatch: 9, identity: 0.7

caatagttcttgcaatcatttcaacaatat	CRISPR spacer
tgccccttcttgcactcatttcaaaaatac	Protospacer
.. .  ******** ********* ****.

117. spacer 1.6|31024|30|NZ_CP048402|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034837 (Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence) position: , mismatch: 9, identity: 0.7

caatagttcttgcaatcatttcaacaatat	CRISPR spacer
tgccccttcttgcactcatttcaaaaatac	Protospacer
.. .  ******** ********* ****.

118. spacer 3.1|300601|32|NZ_CP048402|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045561 (Acinetobacter nosocomialis strain AC1530 plasmid pAC1530, complete sequence) position: , mismatch: 9, identity: 0.719

ttatagcgttctacatcatcttttgcgatagg	CRISPR spacer
tcctttttttcaacatcatcttttgagataga	Protospacer
*. *  . *** ************* *****.

119. spacer 3.1|300601|32|NZ_CP048402|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014478 (Acinetobacter pittii strain AP_882 plasmid pNDM-AP_882, complete sequence) position: , mismatch: 9, identity: 0.719

ttatagcgttctacatcatcttttgcgatagg	CRISPR spacer
tcctttttttcaacatcatcttttgagataga	Protospacer
*. *  . *** ************* *****.

120. spacer 4.1|1542804|32|NZ_CP048402|CRISPRCasFinder,CRT matches to NZ_CP013139 (Pseudoalteromonas sp. Bsw20308 plasmid pPBSW1, complete sequence) position: , mismatch: 9, identity: 0.719

gaaataacgcttgagaaaatcaataacagact	CRISPR spacer
gatttaacgcttgagcaaattaataacttttg	Protospacer
**  *********** ****.******   .

121. spacer 4.1|1542804|32|NZ_CP048402|CRISPRCasFinder,CRT matches to NZ_CP044084 (Pseudomonas luteola strain FDAARGOS_637 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

gaaataacgcttgagaaaatcaataacagact	CRISPR spacer
gggtttggtcttgagaagatcaataacaggct	Protospacer
*.. * .  ********.***********.**

122. spacer 4.5|1543044|32|NZ_CP048402|CRISPRCasFinder,CRT matches to NZ_KX426228 (Acinetobacter lwoffii strain ED23-35 plasmid pALWED1.3, complete sequence) position: , mismatch: 9, identity: 0.719

tattccttattcatctttaatttccgaaaatg	CRISPR spacer
ttgagtgtattcagctttaatatccgaaaatt	Protospacer
*    . ****** ******* *********

123. spacer 4.5|1543044|32|NZ_CP048402|CRISPRCasFinder,CRT matches to NC_017804 (Borreliella garinii BgVir plasmid lp54, complete sequence) position: , mismatch: 9, identity: 0.719

tattccttattcatctttaatttccgaaaatg	CRISPR spacer
aacaatttattcatctttaaattacgaaaaac	Protospacer
 *.  .************** ** ******

124. spacer 4.5|1543044|32|NZ_CP048402|CRISPRCasFinder,CRT matches to NC_006129 (Borreliella bavariensis PBi plasmid lp54, complete sequence) position: , mismatch: 9, identity: 0.719

tattccttattcatctttaatttccgaaaatg	CRISPR spacer
aacaatttattcatctttaaattacgaaaaac	Protospacer
 *.  .************** ** ******

125. spacer 4.5|1543044|32|NZ_CP048402|CRISPRCasFinder,CRT matches to NZ_KU963390 (Escherichia coli strain ECO37 plasmid ECO37P2, complete sequence) position: , mismatch: 9, identity: 0.719

tattccttattcatctttaatttccgaaaatg	CRISPR spacer
ttatccttatttacctttaatttccgcttcta	Protospacer
*  ********.*.************    *.

126. spacer 4.5|1543044|32|NZ_CP048402|CRISPRCasFinder,CRT matches to NZ_CP010193 (Escherichia coli strain M8 plasmid B, complete genome) position: , mismatch: 9, identity: 0.719

tattccttattcatctttaatttccgaaaatg	CRISPR spacer
ttatccttatttacctttaatttccgcttcta	Protospacer
*  ********.*.************    *.

127. spacer 4.15|1543645|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020900 (Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRphaBra5d, complete sequence) position: , mismatch: 9, identity: 0.719

attgccaaacttgccgaacattacaagcaggt	CRISPR spacer
gggaccaatcttgccgaactttacaagctgcg	Protospacer
.  .**** ********** ******** *

128. spacer 4.15|1543645|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013526 (Rhizobium phaseoli strain R744 plasmid pRphaR744d, complete sequence) position: , mismatch: 9, identity: 0.719

attgccaaacttgccgaacattacaagcaggt	CRISPR spacer
gggaccaatcttgccgaactttacaagctgcg	Protospacer
.  .**** ********** ******** *

129. spacer 4.15|1543645|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013556 (Rhizobium phaseoli strain N931 plasmid pRphaN931d, complete sequence) position: , mismatch: 9, identity: 0.719

attgccaaacttgccgaacattacaagcaggt	CRISPR spacer
gggaccaatcttgccgaactttacaagctgcg	Protospacer
.  .**** ********** ******** *

130. spacer 4.15|1543645|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013589 (Rhizobium phaseoli strain N161 plasmid pRphaN161d, complete sequence) position: , mismatch: 9, identity: 0.719

attgccaaacttgccgaacattacaagcaggt	CRISPR spacer
gggaccaatcttgccgaactttacaagctgcg	Protospacer
.  .**** ********** ******** *

131. spacer 4.15|1543645|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013562 (Rhizobium phaseoli strain N841 plasmid pRphaN841e, complete sequence) position: , mismatch: 9, identity: 0.719

attgccaaacttgccgaacattacaagcaggt	CRISPR spacer
gggaccaatcttgccgaactttacaagctgcg	Protospacer
.  .**** ********** ******** *

132. spacer 4.15|1543645|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013579 (Rhizobium phaseoli strain N671 plasmid pRphaN671e, complete sequence) position: , mismatch: 9, identity: 0.719

attgccaaacttgccgaacattacaagcaggt	CRISPR spacer
gggaccaatcttgccgaactttacaagctgcg	Protospacer
.  .**** ********** ******** *

133. spacer 4.15|1543645|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013531 (Rhizobium phaseoli strain R723 plasmid pRphaR723d, complete sequence) position: , mismatch: 9, identity: 0.719

attgccaaacttgccgaacattacaagcaggt	CRISPR spacer
gggaccaatcttgccgaactttacaagctgcg	Protospacer
.  .**** ********** ******** *

134. spacer 4.15|1543645|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013536 (Rhizobium phaseoli strain R650 plasmid pRphaR650d, complete sequence) position: , mismatch: 9, identity: 0.719

attgccaaacttgccgaacattacaagcaggt	CRISPR spacer
gggaccaatcttgccgaactttacaagctgcg	Protospacer
.  .**** ********** ******** *

135. spacer 4.15|1543645|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013541 (Rhizobium phaseoli strain R630 plasmid pRphaR630d, complete sequence) position: , mismatch: 9, identity: 0.719

attgccaaacttgccgaacattacaagcaggt	CRISPR spacer
gggaccaatcttgccgaactttacaagctgcg	Protospacer
.  .**** ********** ******** *

136. spacer 4.15|1543645|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013546 (Rhizobium phaseoli strain R620 plasmid pRphaR620d, complete sequence) position: , mismatch: 9, identity: 0.719

attgccaaacttgccgaacattacaagcaggt	CRISPR spacer
gggaccaatcttgccgaactttacaagctgcg	Protospacer
.  .**** ********** ******** *

137. spacer 4.15|1543645|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013567 (Rhizobium phaseoli strain N831 plasmid pRphaN831d, complete sequence) position: , mismatch: 9, identity: 0.719

attgccaaacttgccgaacattacaagcaggt	CRISPR spacer
gggaccaatcttgccgaactttacaagctgcg	Protospacer
.  .**** ********** ******** *

138. spacer 4.15|1543645|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013584 (Rhizobium phaseoli strain N261 plasmid pRphaN261d, complete sequence) position: , mismatch: 9, identity: 0.719

attgccaaacttgccgaacattacaagcaggt	CRISPR spacer
gggaccaatcttgccgaactttacaagctgcg	Protospacer
.  .**** ********** ******** *

139. spacer 4.15|1543645|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013573 (Rhizobium phaseoli strain N771 plasmid pRphaN771e, complete sequence) position: , mismatch: 9, identity: 0.719

attgccaaacttgccgaacattacaagcaggt	CRISPR spacer
gggaccaatcttgccgaactttacaagctgcg	Protospacer
.  .**** ********** ******** *

140. spacer 4.15|1543645|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to NC_010997 (Rhizobium etli CIAT 652 plasmid pC, complete sequence) position: , mismatch: 9, identity: 0.719

attgccaaacttgccgaacattacaagcaggt	CRISPR spacer
gggaccaatcttgccgaactttacaagctgcg	Protospacer
.  .**** ********** ******** *

141. spacer 4.18|1543825|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045276 (Bacillus megaterium strain FDU301 plasmid pFDU301D, complete sequence) position: , mismatch: 9, identity: 0.719

ataaaaaacaacgctatgaaaaaggctatgat	CRISPR spacer
ataagaaagaacgctatgaaaaacggcgattt	Protospacer
****.*** ************** * ..   *

142. spacer 4.18|1543825|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013139 (Pseudoalteromonas sp. Bsw20308 plasmid pPBSW1, complete sequence) position: , mismatch: 9, identity: 0.719

ataaaaaacaacgctatgaaaaaggctatgat----	CRISPR spacer
ataaaaaacaacgccttgaaaaa----atagcacac	Protospacer
**************. *******    **...

143. spacer 4.18|1543825|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to MG945678 (UNVERIFIED: Microviridae sp. isolate 957-1801, complete genome) position: , mismatch: 9, identity: 0.719

ataaaaaacaacgctatgaaaaaggctatgat	CRISPR spacer
ataaaacacaacgctataaaaaaccattttgc	Protospacer
****** **********.*****   * * ..

144. spacer 4.21|1544005|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to JN638751 (Bacillus phage G, complete genome) position: , mismatch: 9, identity: 0.719

tttcttctaaaatattaaaattcaaaatcaaa	CRISPR spacer
tcgggttcaaaataataaaattcaaattcaac	Protospacer
*.   *..****** *********** ****

145. spacer 4.21|1544005|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to NC_013940 (Deferribacter desulfuricans SSM1 megaplasmid pDF308, complete sequence) position: , mismatch: 9, identity: 0.719

tttcttctaaaatattaaaattcaaaatcaaa	CRISPR spacer
gaaattttaaaatattaaaattaaaaaataat	Protospacer
    **.*************** **** .**

146. spacer 4.21|1544005|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to HM246721 (Campylobacter phage vB_CcoM-IBB_35 clone Contig2, complete sequence) position: , mismatch: 9, identity: 0.719

tttcttctaaaatattaaaattcaaaatcaaa	CRISPR spacer
aaatttctaaaatactaaaattctaaaactca	Protospacer
   .**********.******** *** *  *

147. spacer 4.23|1544125|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP019719 (Clostridium butyricum strain NBRC 13949 plasmid pCBU3, complete sequence) position: , mismatch: 9, identity: 0.719

gtgttgttgtgaagattgttgtaaaatgaaga	CRISPR spacer
tctttgttgtaaagtttgttgtaaaacaaggt	Protospacer
 . *******.*** ***********..*.*

148. spacer 4.23|1544125|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP047810 (Staphylococcus aureus strain UP_1591 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

gtgttgttgtgaagattgttgtaaaatgaaga-----	CRISPR spacer
ttattgttttgaggattgttgtaaaa-----attttc	Protospacer
 *.***** ***.*************     *

149. spacer 4.26|1544300|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to NC_031922 (Synechococcus phage S-CAM9 isolate 1109NB16, complete genome) position: , mismatch: 9, identity: 0.719

cgattatagaaacaagagaaggggtaacgcaa	CRISPR spacer
ttattttagaaacaagagaaggagtgatgttg	Protospacer
. *** ****************.**.*.*. .

150. spacer 4.26|1544300|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to KU686204 (Synechococcus phage S-CAM9 isolate 0808SB05, complete genome) position: , mismatch: 9, identity: 0.719

cgattatagaaacaagagaaggggtaacgcaa	CRISPR spacer
ttattttagaaacaagagaaggagtgatgttg	Protospacer
. *** ****************.**.*.*. .

151. spacer 4.26|1544300|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to KU686205 (Synechococcus phage S-CAM9 isolate 0908SB82, complete genome) position: , mismatch: 9, identity: 0.719

cgattatagaaacaagagaaggggtaacgcaa	CRISPR spacer
ttattttagaaacaagagaaggagtgatgttg	Protospacer
. *** ****************.**.*.*. .

152. spacer 4.30|1544540|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to MN895435 (Escherichia phage teqhal, complete genome) position: , mismatch: 9, identity: 0.719

tgatttgcatgaaaaaaataacgatttctagc	CRISPR spacer
acatttgcatgaaaaatataaagattataaat	Protospacer
  ************** **** **** . *..

153. spacer 4.30|1544540|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to KU925172 (Escherichia phage PE37, complete genome) position: , mismatch: 9, identity: 0.719

tgatttgcatgaaaaaaataacgatttctagc	CRISPR spacer
acatttgcatgaaaaatataaagattataaat	Protospacer
  ************** **** **** . *..

154. spacer 4.30|1544540|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to MT176425 (Citrobacter phage PhiZZ23, complete genome) position: , mismatch: 9, identity: 0.719

tgatttgcatgaaaaaaataacgatttctagc	CRISPR spacer
acatttgcatgaaaaatataaagattataaat	Protospacer
  ************** **** **** . *..

155. spacer 4.30|1544540|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to MK373781 (Escherichia phage vB_EcoM_KAW1E185, complete genome) position: , mismatch: 9, identity: 0.719

tgatttgcatgaaaaaaataacgatttctagc	CRISPR spacer
acatttgcatgaaaaatataaagattataaat	Protospacer
  ************** **** **** . *..

156. spacer 4.30|1544540|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to MH553563 (Enterobacteria phage RB18, complete genome) position: , mismatch: 9, identity: 0.719

tgatttgcatgaaaaaaataacgatttctagc	CRISPR spacer
acatttgcatgaaaaatataaagattataaat	Protospacer
  ************** **** **** . *..

157. spacer 4.30|1544540|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to MN781580 (Shigella virus KRT47, complete genome) position: , mismatch: 9, identity: 0.719

tgatttgcatgaaaaaaataacgatttctagc	CRISPR spacer
acatttgcatgaaaaatataaagattataaat	Protospacer
  ************** **** **** . *..

158. spacer 4.30|1544540|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to MK373785 (Escherichia phage vB_EcoM_OE5505, complete genome) position: , mismatch: 9, identity: 0.719

tgatttgcatgaaaaaaataacgatttctagc	CRISPR spacer
gcatttgcatgaaaaatataaagattataaag	Protospacer
  ************** **** **** . *.

159. spacer 4.30|1544540|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to NC_042078 (Shigella phage Sf24, complete genome) position: , mismatch: 9, identity: 0.719

tgatttgcatgaaaaaaataacgatttctagc	CRISPR spacer
acatttgcatgaaaaatataaagattataaat	Protospacer
  ************** **** **** . *..

160. spacer 4.30|1544540|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to MT446387 (UNVERIFIED: Escherichia virus TH09, complete genome) position: , mismatch: 9, identity: 0.719

tgatttgcatgaaaaaaataacgatttctagc	CRISPR spacer
acatttgcatgaaaaatataaagattataaat	Protospacer
  ************** **** **** . *..

161. spacer 4.30|1544540|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to MK327939 (Escherichia phage vB_EcoM_G4498, complete genome) position: , mismatch: 9, identity: 0.719

tgatttgcatgaaaaaaataacgatttctagc	CRISPR spacer
acatttgcatgaaaaatataaagattataaat	Protospacer
  ************** **** **** . *..

162. spacer 4.30|1544540|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to MH992510 (Escherichia phage vB_EcoM_DalCa, complete genome) position: , mismatch: 9, identity: 0.719

tgatttgcatgaaaaaaataacgatttctagc	CRISPR spacer
acatttgcatgaaaaatataaagattataaat	Protospacer
  ************** **** **** . *..

163. spacer 4.30|1544540|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to MT774375 (CrAssphage cr50_1, complete genome) position: , mismatch: 9, identity: 0.719

tgatttgcatgaaaaaaataacgatttctagc	CRISPR spacer
ttatatgcatgaaaaaaataaagatggtcata	Protospacer
* ** **************** ***  ..*

164. spacer 4.35|1544840|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to KT337346 (Streptococcus phage phiARI0285-2, partial genome) position: , mismatch: 9, identity: 0.719

tccacccatttgagtaaccgacatccggaata	CRISPR spacer
accacccatttgagtaaacgtcatttccaact	Protospacer
 **************** ** ***..  **.

165. spacer 4.35|1544840|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to KX550065 (Streptococcus phage SpGS-1, complete genome) position: , mismatch: 9, identity: 0.719

tccacccatttgagtaaccgacatccggaata	CRISPR spacer
accacccatttgagtaaacgtcatttccaact	Protospacer
 **************** ** ***..  **.

166. spacer 4.35|1544840|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to KY065502 (Streptococcus phage IPP66, complete genome) position: , mismatch: 9, identity: 0.719

tccacccatttgagtaaccgacatccggaata	CRISPR spacer
accacccatttgagtaaacgtcatttccaact	Protospacer
 **************** ** ***..  **.

167. spacer 4.35|1544840|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to KY065479 (Streptococcus phage IPP39, complete genome) position: , mismatch: 9, identity: 0.719

tccacccatttgagtaaccgacatccggaata	CRISPR spacer
accacccatttgagtaaacgtcatttccaact	Protospacer
 **************** ** ***..  **.

168. spacer 4.35|1544840|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to KT337348 (Streptococcus phage phiARI0378, partial genome) position: , mismatch: 9, identity: 0.719

tccacccatttgagtaaccgacatccggaata	CRISPR spacer
accacccatttgagtaaacgtcatttccaact	Protospacer
 **************** ** ***..  **.

169. spacer 4.35|1544840|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to KY065455 (Streptococcus phage IPP14, complete genome) position: , mismatch: 9, identity: 0.719

tccacccatttgagtaaccgacatccggaata	CRISPR spacer
accacccatttgagtaaacgtcatttccaact	Protospacer
 **************** ** ***..  **.

170. spacer 4.35|1544840|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to KY065487 (Streptococcus phage IPP48, complete genome) position: , mismatch: 9, identity: 0.719

tccacccatttgagtaaccgacatccggaata	CRISPR spacer
accacccatttgagtaaacgtcatttccaact	Protospacer
 **************** ** ***..  **.

171. spacer 4.35|1544840|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to KT337363 (Streptococcus phage phiARI0639, partial genome) position: , mismatch: 9, identity: 0.719

tccacccatttgagtaaccgacatccggaata	CRISPR spacer
accacccatttgagtaaacgtcatttccaact	Protospacer
 **************** ** ***..  **.

172. spacer 4.35|1544840|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to KT337358 (Streptococcus phage phiARI0468-4, complete genome) position: , mismatch: 9, identity: 0.719

tccacccatttgagtaaccgacatccggaata	CRISPR spacer
accacccatttgagtaaacgtcatttccaact	Protospacer
 **************** ** ***..  **.

173. spacer 4.35|1544840|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to KY065501 (Streptococcus phage IPP65, complete genome) position: , mismatch: 9, identity: 0.719

tccacccatttgagtaaccgacatccggaata	CRISPR spacer
accacccatttgagtaaacgtcatttccaact	Protospacer
 **************** ** ***..  **.

174. spacer 4.35|1544840|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to KY065493 (Streptococcus phage IPP55, complete genome) position: , mismatch: 9, identity: 0.719

tccacccatttgagtaaccgacatccggaata	CRISPR spacer
accacccatttgagtaaacgtcatttccaact	Protospacer
 **************** ** ***..  **.

175. spacer 4.35|1544840|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to KY065491 (Streptococcus phage IPP53, complete genome) position: , mismatch: 9, identity: 0.719

tccacccatttgagtaaccgacatccggaata	CRISPR spacer
accacccatttgagtaaacgtcatttccaact	Protospacer
 **************** ** ***..  **.

176. spacer 4.35|1544840|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to DQ113772 (Streptococcus pneumoniae bacteriophage MM1 1998, complete genome) position: , mismatch: 9, identity: 0.719

tccacccatttgagtaaccgacatccggaata	CRISPR spacer
accacccatttgagtaaacgtcatttccaact	Protospacer
 **************** ** ***..  **.

177. spacer 4.35|1544840|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to KY065490 (Streptococcus phage IPP52, complete genome) position: , mismatch: 9, identity: 0.719

tccacccatttgagtaaccgacatccggaata	CRISPR spacer
accacccatttgagtaaacgtcatttccaact	Protospacer
 **************** ** ***..  **.

178. spacer 4.35|1544840|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to KY065492 (Streptococcus phage IPP54, complete genome) position: , mismatch: 9, identity: 0.719

tccacccatttgagtaaccgacatccggaata	CRISPR spacer
accacccatttgagtaaacgtcatttccaact	Protospacer
 **************** ** ***..  **.

179. spacer 4.35|1544840|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to AJ302074 (Streptococcus pneumoniae bacteriophage MM1 complete genome) position: , mismatch: 9, identity: 0.719

tccacccatttgagtaaccgacatccggaata	CRISPR spacer
accacccatttgagtaaacgtcatttccaact	Protospacer
 **************** ** ***..  **.

180. spacer 4.35|1544840|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to NC_022791 (Streptococcus phage phiBHN167 complete genome) position: , mismatch: 9, identity: 0.719

tccacccatttgagtaaccgacatccggaata	CRISPR spacer
accacccatttgagtaaacgtcatttccaact	Protospacer
 **************** ** ***..  **.

181. spacer 4.38|1545020|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP017969 (Fusobacterium varium strain Fv113-g1 plasmid pFV113-g1-1, complete sequence) position: , mismatch: 9, identity: 0.719

taaaattgacacaagaacaattaggggcaatt	CRISPR spacer
taaaattgacaaaagaagaattaaaaaaatta	Protospacer
*********** ***** *****.... * *

182. spacer 4.41|1545200|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to MH491968 (Escherichia phage LL5, complete genome) position: , mismatch: 9, identity: 0.719

agccgcttctacttgaccgacgtgtgcataaa	CRISPR spacer
cacgcttcctacttgaccgccgtttgcataac	Protospacer
 .*  .*.*********** *** *******

183. spacer 4.41|1545200|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to AY308796 (Bacteriophage TLS, complete genome) position: , mismatch: 9, identity: 0.719

agccgcttctacttgaccgacgtgtgcataaa	CRISPR spacer
cacgcttcctacttgaccgccgtttgcataac	Protospacer
 .*  .*.*********** *** *******

184. spacer 4.41|1545200|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to NC_009540 (Enterobacteria phage TLS, complete genome) position: , mismatch: 9, identity: 0.719

agccgcttctacttgaccgacgtgtgcataaa	CRISPR spacer
cacgcttcctacttgaccgccgtttgcataac	Protospacer
 .*  .*.*********** *** *******

185. spacer 4.41|1545200|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to NC_047898 (Salmonella phage YSP2, complete genome) position: , mismatch: 9, identity: 0.719

agccgcttctacttgaccgacgtgtgcataaa	CRISPR spacer
cacgcttcctacttgaccgccgtttgcataac	Protospacer
 .*  .*.*********** *** *******

186. spacer 4.41|1545200|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to MH729819 (Citrobacter phage Sazh, complete genome) position: , mismatch: 9, identity: 0.719

agccgcttctacttgaccgacgtgtgcataaa	CRISPR spacer
cacgcttcctacttgaccgccgtttgcataac	Protospacer
 .*  .*.*********** *** *******

187. spacer 4.41|1545200|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to NC_047823 (Citrobacter phage CF1 DK-2017, complete genome) position: , mismatch: 9, identity: 0.719

agccgcttctacttgaccgacgtgtgcataaa	CRISPR spacer
cacgcttcctacttgaccgccgtttgcataac	Protospacer
 .*  .*.*********** *** *******

188. spacer 4.41|1545200|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to KY657202 (Salmonella phage GJL01, complete genome) position: , mismatch: 9, identity: 0.719

agccgcttctacttgaccgacgtgtgcataaa	CRISPR spacer
cacgcttcctacttgaccgccgtttgcataac	Protospacer
 .*  .*.*********** *** *******

189. spacer 4.41|1545200|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to KX015771 (Salmonella phage phSE-5, complete genome) position: , mismatch: 9, identity: 0.719

agccgcttctacttgaccgacgtgtgcataaa	CRISPR spacer
cacgcttcctacttgaccgccgtttgcataac	Protospacer
 .*  .*.*********** *** *******

190. spacer 4.41|1545200|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to LR597656 (Escherichia phage Stevie_ev116 genome assembly, chromosome: 1) position: , mismatch: 9, identity: 0.719

agccgcttctacttgaccgacgtgtgcataaa	CRISPR spacer
cacgcttcctacttgaccgccgtttgcataac	Protospacer
 .*  .*.*********** *** *******

191. spacer 4.41|1545200|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to NC_029071 (Salmonella phage 36, complete genome) position: , mismatch: 9, identity: 0.719

agccgcttctacttgaccgacgtgtgcataaa	CRISPR spacer
cacgcttcctacttgaccgccgtttgcataac	Protospacer
 .*  .*.*********** *** *******

192. spacer 4.41|1545200|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to NC_042066 (Salmonella phage FSL SP-126, partial genome) position: , mismatch: 9, identity: 0.719

agccgcttctacttgaccgacgtgtgcataaa	CRISPR spacer
cacgcttcctacttgaccgccgtttgcataac	Protospacer
 .*  .*.*********** *** *******

193. spacer 4.41|1545200|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to KX015770 (Salmonella phage phSE-2, complete genome) position: , mismatch: 9, identity: 0.719

agccgcttctacttgaccgacgtgtgcataaa	CRISPR spacer
cacgcttcctacttgaccgccgtttgcataac	Protospacer
 .*  .*.*********** *** *******

194. spacer 4.41|1545200|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to KM236241 (Citrobacter phage Stevie, complete genome) position: , mismatch: 9, identity: 0.719

agccgcttctacttgaccgacgtgtgcataaa	CRISPR spacer
cacgcttcctacttgaccgccgtttgcataac	Protospacer
 .*  .*.*********** *** *******

195. spacer 4.42|1545260|33|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009921 (Bacillus megaterium NBRC 15308 = ATCC 14581 plasmid pBMV_2, complete sequence) position: , mismatch: 9, identity: 0.727

cacatgcgagagcttcaaagagtattttgggtc	CRISPR spacer
gaagagaacgagctgcaaggagtattttgggtc	Protospacer
 * . * . ***** ***.**************

196. spacer 4.42|1545260|33|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP035095 (Bacillus megaterium NBRC 15308 = ATCC 14581 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.727

cacatgcgagagcttcaaagagtattttgggtc	CRISPR spacer
gaagagaacgagctgcaaggagtattttgggtc	Protospacer
 * . * . ***** ***.**************

197. spacer 4.44|1545381|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KY270848 (Enterococcus faecalis strain 2 plasmid pGTC2, complete sequence) position: , mismatch: 9, identity: 0.719

gctttgctgttgataaatatcttgcattgtta	CRISPR spacer
tagcagctgttgataaacatcgtgcatttcta	Protospacer
   . ************.*** ****** .**

198. spacer 4.44|1545381|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to AP014343 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S38-C17, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.719

----gctttgctgttgataaatatcttgcattgtta	CRISPR spacer
cagaaatct----ttcatacatatcttgcattgtta	Protospacer
    . *.*    ** *** ****************

199. spacer 4.46|1545501|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053818 (Vibrio cholerae strain SA7G plasmid pSA7G1, complete sequence) position: , mismatch: 9, identity: 0.719

cttcacgattgccaaatggacgttttaaaaac	CRISPR spacer
cttctcgattgccaaatggtcgtcatcatgtg	Protospacer
**** ************** ***. * * .

200. spacer 4.50|1542925|31|NZ_CP048402|PILER-CR matches to MN850621 (Escherichia phage dhabil, complete genome) position: , mismatch: 9, identity: 0.71

aagtcatcttttgaataatgtcttggtcttt	CRISPR spacer
gccatatcttttgaataatgtctggctcctg	Protospacer
.   .****************** * **.*

201. spacer 4.52|1543045|31|NZ_CP048402|PILER-CR matches to NZ_KX426228 (Acinetobacter lwoffii strain ED23-35 plasmid pALWED1.3, complete sequence) position: , mismatch: 9, identity: 0.71

attccttattcatctttaatttccgaaaatg	CRISPR spacer
tgagtgtattcagctttaatatccgaaaatt	Protospacer
    . ****** ******* *********

202. spacer 4.52|1543045|31|NZ_CP048402|PILER-CR matches to NZ_KU963390 (Escherichia coli strain ECO37 plasmid ECO37P2, complete sequence) position: , mismatch: 9, identity: 0.71

attccttattcatctttaatttccgaaaatg	CRISPR spacer
tatccttatttacctttaatttccgcttcta	Protospacer
  ********.*.************    *.

203. spacer 4.52|1543045|31|NZ_CP048402|PILER-CR matches to NZ_CP010193 (Escherichia coli strain M8 plasmid B, complete genome) position: , mismatch: 9, identity: 0.71

attccttattcatctttaatttccgaaaatg	CRISPR spacer
tatccttatttacctttaatttccgcttcta	Protospacer
  ********.*.************    *.

204. spacer 1.4|30892|30|NZ_CP048402|PILER-CR,CRISPRCasFinder,CRT matches to MN693680 (Marine virus AFVG_250M653, complete genome) position: , mismatch: 10, identity: 0.667

agaaaagtcctgacatctgggcaatgatat	CRISPR spacer
tcttgcgtcctgacatctgggctatgagca	Protospacer
    . **************** ****

205. spacer 3.1|300601|32|NZ_CP048402|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015111 (Acinetobacter sp. TGL-Y2 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

ttatagcgttctacatcatcttttgcgatagg	CRISPR spacer
agatagcgttctacttcatctttggcagggaa	Protospacer
  ************ ******** **.. ...

206. spacer 4.3|1542924|32|NZ_CP048402|CRISPRCasFinder,CRT matches to MN850621 (Escherichia phage dhabil, complete genome) position: , mismatch: 10, identity: 0.688

caagtcatcttttgaataatgtcttggtcttt	CRISPR spacer
tgccatatcttttgaataatgtctggctcctg	Protospacer
..   .****************** * **.*

207. spacer 4.19|1543885|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026603 (Clostridiaceae bacterium 14S0207 plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.688

gtcatgaaagtttatataacttaacacctatt	CRISPR spacer
gaaattaatgtttatataacttaacagaacgc	Protospacer
*  ** ** *****************     .

208. spacer 4.19|1543885|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019601 (Brachyspira hyodysenteriae strain BH718 plasmid pBH718, complete sequence) position: , mismatch: 10, identity: 0.688

gtcatgaaagtttatataacttaacacctatt	CRISPR spacer
tggatgaaaatttaaataacttaacagtatat	Protospacer
   ******.**** *********** .   *

209. spacer 4.19|1543885|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to NC_012226 (Brachyspira hyodysenteriae WA1 plasmid pBHWA1, complete sequence) position: , mismatch: 10, identity: 0.688

gtcatgaaagtttatataacttaacacctatt	CRISPR spacer
tggatgaaaatttaaataacttaacagtatat	Protospacer
   ******.**** *********** .   *

210. spacer 4.19|1543885|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016085 (Brachyspira hyodysenteriae ATCC 27164 strain B-78 plasmid pBhyoB78, complete sequence) position: , mismatch: 10, identity: 0.688

gtcatgaaagtttatataacttaacacctatt	CRISPR spacer
tggatgaaaatttaaataacttaacagtatat	Protospacer
   ******.**** *********** .   *

211. spacer 4.21|1544005|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP014816 (Geminocystis sp. NIES-3708 plasmid pGM01, complete sequence) position: , mismatch: 10, identity: 0.688

tttcttctaaaatattaaaattcaaaatcaaa	CRISPR spacer
aatcttgtaaaatattaatattcaagttttgg	Protospacer
  **** *********** ******. *. ..

212. spacer 4.21|1544005|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to LC425521 (Uncultured phage DNA, contig: NODE562) position: , mismatch: 10, identity: 0.688

tttcttctaaaatattaaaattcaaaatcaaa	CRISPR spacer
acaaaccagaaatattgaaattcaaactcaaa	Protospacer
 .   .* .*******.********* *****

213. spacer 4.30|1544540|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019063 (Rahnella sp. ERMR1:05 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

tgatttgcatgaaaaaaataacgatttctagc	CRISPR spacer
tgaattacatgaaaaaaataacgccacgatgg	Protospacer
*** **.**************** . .   *

214. spacer 4.38|1545020|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to MK415406 (Phage FAKO27_000238F, complete genome) position: , mismatch: 10, identity: 0.688

taaaattgacacaagaacaattaggggcaatt	CRISPR spacer
taaaaatgacacaagaagaattaaaattagca	Protospacer
***** *********** *****... .*..

215. spacer 4.41|1545200|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to MT478992 (Escherichia phage vB_EcoS_011D2, complete genome) position: , mismatch: 10, identity: 0.688

agccgcttctacttgaccgacgtgtgcataaa	CRISPR spacer
cacgctccctacttgaccgccgtttgcataac	Protospacer
 .*  ...*********** *** *******

216. spacer 4.41|1545200|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to MH102284 (Salmonella phage vB_SenS_PHB07, complete genome) position: , mismatch: 10, identity: 0.688

agccgcttctacttgaccgacgtgtgcataaa	CRISPR spacer
cacgctccctacttgaccgccgtttgcataac	Protospacer
 .*  ...*********** *** *******

217. spacer 4.44|1545381|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR215032 (Mycoplasma gallopavonis strain NCTC10186 plasmid 2) position: , mismatch: 10, identity: 0.688

gctttgctgttgataaatatcttgcattgtta	CRISPR spacer
ttgaagcttttgataaatatattgcatttctt	Protospacer
 .   *** *********** ******* .*

218. spacer 4.44|1545381|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR215033 (Mycoplasma gallopavonis strain NCTC10186 plasmid 3) position: , mismatch: 10, identity: 0.688

gctttgctgttgataaatatcttgcattgtta	CRISPR spacer
ttgaagcttttgataaatatattgcatttctt	Protospacer
 .   *** *********** ******* .*

219. spacer 4.44|1545381|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR215034 (Mycoplasma gallopavonis strain NCTC10186 plasmid 4) position: , mismatch: 10, identity: 0.688

gctttgctgttgataaatatcttgcattgtta	CRISPR spacer
ttgaagcttttgataaatatattgcatttctt	Protospacer
 .   *** *********** ******* .*

220. spacer 4.44|1545381|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to LT960552 (Yersinia phage fHe-Yen9-03 genome assembly, complete genome: monopartite) position: , mismatch: 10, identity: 0.688

gctttgctgttgataaatatcttgcattgtta	CRISPR spacer
atataaatgctgatgaatatcttgcattgtag	Protospacer
.. * . **.****.*************** .

221. spacer 4.44|1545381|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to LR596615 (Yersinia phage fHe-Yen9-04 genome assembly, chromosome: I) position: , mismatch: 10, identity: 0.688

gctttgctgttgataaatatcttgcattgtta	CRISPR spacer
atataaatgctgatgaatatcttgcattgtag	Protospacer
.. * . **.****.*************** .

222. spacer 4.44|1545381|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to NC_042116 (Yersinia phage fHe-Yen9-04 genome assembly, complete genome: monopartite) position: , mismatch: 10, identity: 0.688

gctttgctgttgataaatatcttgcattgtta	CRISPR spacer
atataaatgctgatgaatatcttgcattgtag	Protospacer
.. * . **.****.*************** .

223. spacer 4.44|1545381|32|NZ_CP048402|CRISPRCasFinder,CRT,PILER-CR matches to MN694154 (Marine virus AFVG_250M77, complete genome) position: , mismatch: 10, identity: 0.688

gctttgctgttgataaatatcttgcattgtta	CRISPR spacer
atcttgctgttgataaatctcctgcaccagca	Protospacer
...*************** **.****... .*

224. spacer 4.50|1542925|31|NZ_CP048402|PILER-CR matches to NC_028957 (Enterobacteria phage vB_EcoM_VR26, complete genome) position: , mismatch: 10, identity: 0.677

aagtcatcttttgaataatgtcttggtcttt	CRISPR spacer
gccatatcttttgaataatgtctggctccag	Protospacer
.   .****************** * **.

225. spacer 4.50|1542925|31|NZ_CP048402|PILER-CR matches to MT446392 (UNVERIFIED: Escherichia virus TH15, complete genome) position: , mismatch: 10, identity: 0.677

aagtcatcttttgaataatgtcttggtcttt	CRISPR spacer
gccatatcttttgaataatgtctggctccag	Protospacer
.   .****************** * **.

226. spacer 4.52|1543045|31|NZ_CP048402|PILER-CR matches to MK250027 (Prevotella phage Lak-B8, complete genome) position: , mismatch: 10, identity: 0.677

attccttattcatctttaatttccgaaaatg	CRISPR spacer
tttccatcttcatctttaatttcctctgtat	Protospacer
 **** * ****************   .

227. spacer 4.52|1543045|31|NZ_CP048402|PILER-CR matches to MK250026 (Prevotella phage Lak-B7, complete genome) position: , mismatch: 10, identity: 0.677

attccttattcatctttaatttccgaaaatg	CRISPR spacer
tttccatcttcatctttaatttcctctgtat	Protospacer
 **** * ****************   .

228. spacer 4.52|1543045|31|NZ_CP048402|PILER-CR matches to MK250023 (Prevotella phage Lak-B4, complete genome) position: , mismatch: 10, identity: 0.677

attccttattcatctttaatttccgaaaatg	CRISPR spacer
tttccatcttcatctttaatttcctctgtat	Protospacer
 **** * ****************   .

229. spacer 4.3|1542924|32|NZ_CP048402|CRISPRCasFinder,CRT matches to MT446392 (UNVERIFIED: Escherichia virus TH15, complete genome) position: , mismatch: 11, identity: 0.656

caagtcatcttttgaataatgtcttggtcttt	CRISPR spacer
tgccatatcttttgaataatgtctggctccag	Protospacer
..   .****************** * **.

230. spacer 4.3|1542924|32|NZ_CP048402|CRISPRCasFinder,CRT matches to NC_028957 (Enterobacteria phage vB_EcoM_VR26, complete genome) position: , mismatch: 11, identity: 0.656

caagtcatcttttgaataatgtcttggtcttt	CRISPR spacer
tgccatatcttttgaataatgtctggctccag	Protospacer
..   .****************** * **.

231. spacer 4.5|1543044|32|NZ_CP048402|CRISPRCasFinder,CRT matches to MK250027 (Prevotella phage Lak-B8, complete genome) position: , mismatch: 11, identity: 0.656

tattccttattcatctttaatttccgaaaatg	CRISPR spacer
ctttccatcttcatctttaatttcctctgtat	Protospacer
. **** * ****************   .

232. spacer 4.5|1543044|32|NZ_CP048402|CRISPRCasFinder,CRT matches to MK250026 (Prevotella phage Lak-B7, complete genome) position: , mismatch: 11, identity: 0.656

tattccttattcatctttaatttccgaaaatg	CRISPR spacer
ctttccatcttcatctttaatttcctctgtat	Protospacer
. **** * ****************   .

233. spacer 4.5|1543044|32|NZ_CP048402|CRISPRCasFinder,CRT matches to MK250023 (Prevotella phage Lak-B4, complete genome) position: , mismatch: 11, identity: 0.656

tattccttattcatctttaatttccgaaaatg	CRISPR spacer
ctttccatcttcatctttaatttcctctgtat	Protospacer
. **** * ****************   .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1086927 : 1096286

Sinorhizobium_phage(16.67%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_163884025.1\|1086927_1088202_+	multifunctional CCA addition/repair protein	A0A0F6YPT7	Sinorhizobium_phage	5.1e-92	49.5
WP_005753554.1\|1088242_1088860_+	lipoprotein localization protein LolB	NA	NA	NA	NA
WP_005724298.1\|1088859_1089747_+	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA
WP_005724296.1\|1089816_1090764_+	ribose-phosphate pyrophosphokinase	A0A2K9L2G2	Tupanvirus	1.9e-43	38.7
WP_163884296.1\|1090839_1092393_-	murein DD-endopeptidase MepM	A0A2K9VGT1	Pontimonas_phage	8.4e-20	49.6
WP_005753549.1\|1092627_1093419_+	zinc ABC transporter ATP-binding protein ZnuC	W6JKT0	Anomala_cuprea_entomopoxvirus	3.4e-17	29.7
WP_078819097.1\|1093427_1094213_+	zinc ABC transporter permease subunit ZnuB	NA	NA	NA	NA
WP_005724065.1\|1094290_1095271_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.3e-15	26.4
WP_005721071.1\|1095287_1096286_-	dipeptide ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.3e-15	29.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP048402

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection