CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP048004	Lactobacillus paracasei strain CACC 566 plasmid p1CACC566, complete sequence	0 crisprs	NA	0	0
NZ_CP048005	Lactobacillus paracasei strain CACC 566 plasmid p2CACC566, complete sequence	0 crisprs	PrimPol	0	0
NZ_CP048003	Lactobacillus paracasei strain CACC 566 chromosome, complete genome	4 crisprs	cas3,DEDDh,csa3,csa5gr11,WYL,DinG,cas1,cas2,csn2	22	7

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP048003_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048003_1

202708-202838

Orphan

Consensus_repeat	Method
GACCAAAGCCCTGTCTGATATTGCTGAACTCCGAAACGCGCAAACCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP048003_1

>merge|NZ_CP048003|1|202708-202838|CRISPRCasFinder
GACCAAAGCCCTGTCTGATATTGCTGAACTCCGAAACGCGCAAACCGACCCAGAAACCGAAGCATAAGGGCTTCGAACCTACACGACCAAAGCCCTGCCTGATATTGCTGAACTCCGAAACGCGCAAACCG

>NZ_CP048003|1|1|202708-202838|CRISPRCasFinder
GACCAAAGCCCTGTCTGATATTGCTGAACTCCGAAACGCGCAAACCG	ACCCAGAAACCGAAGCATAAGGGCTTCGAACCTACAC
GACCAAAGCCCTGCCTGATATTGCTGAACTCCGAAACGCGCAAACCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048003.1\|WP_016381496.1\|206365_207487_-\|exonuclease-SbcCD-subunit-D	unknown	unknown	gnl\|CDD\|223497
NZ_CP048003.1\|WP_003569169.1\|211545_212484_+\|tagatose-6-phosphate-kinase	unknown	unknown	gnl\|CDD\|237405
NZ_CP048003.1\|WP_003563792.1\|194675_195737_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048003.1\|WP_003569189.1\|199118_199904_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223730
NZ_CP048003.1\|WP_003569168.1\|212505_213186_+\|DUF4867-family-protein	unknown	unknown	gnl\|CDD\|379783
NZ_CP048003.1\|WP_003569192.1\|197669_198194_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048003.1\|WP_003569166.1\|213629_213824_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048003.1\|WP_003587361.1\|203240_206366_-\|SMC-family-ATPase	unknown	unknown	gnl\|CDD\|223496
NZ_CP048003.1\|WP_011674244.1\|196803_197436_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227169
NZ_CP048003.1\|WP_003573966.1\|201774_202251_-\|Hsp20/alpha-crystallin-family-protein	unknown	unknown	gnl\|CDD\|107228
NZ_CP048003.1\|WP_003563790.1\|195910_196732_+\|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase	unknown	unknown	gnl\|CDD\|238574
NZ_CP048003.1\|WP_003563745.1\|207547_208174_+\|HAD-IA-family-hydrolase	unknown	unknown	gnl\|CDD\|372595
NZ_CP048003.1\|WP_003563776.1\|198447_199116_-\|NAD(P)H-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|376808
NZ_CP048003.1\|WP_003569186.1\|200114_201218_-\|A/G-specific-adenine-glycosylase	unknown	unknown	gnl\|CDD\|224115
NZ_CP048003.1\|WP_003563743.1\|208618_209395_+\|DeoR/GlpR-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224268
NZ_CP048003.1\|WP_003563777.1\|198271_198451_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048003.1\|WP_016363499.1\|201547_201781_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048003.1\|WP_003569171.1\|210429_211431_+\|tagatose-bisphosphate-aldolase	unknown	unknown	gnl\|CDD\|183502
NZ_CP048003.1\|WP_003569175.1\|209399_209828_+\|galactose-6-phosphate-isomerase-subunit-LacA	unknown	unknown	gnl\|CDD\|181505
NZ_CP048003.1\|WP_003569173.1\|209872_210391_+\|galactose-6-phosphate-isomerase-subunit-LacB	unknown	unknown	gnl\|CDD\|181506

Protein	Function_ID	Function_description	E-value
NZ_CP048003.1\|WP_016381496.1\|206365_207487_-\|exonuclease-SbcCD-subunit-D	gnl\|CDD\|223497	COG0420, SbcD, DNA repair exonuclease [DNA replication, recombination, and repair].	7.81151e-49
NZ_CP048003.1\|WP_003569169.1\|211545_212484_+\|tagatose-6-phosphate-kinase	gnl\|CDD\|237405	PRK13508, PRK13508, tagatose-6-phosphate kinase; Provisional.	8.80119e-143
NZ_CP048003.1\|WP_003569168.1\|212505_213186_+\|DUF4867-family-protein	gnl\|CDD\|379783	pfam16161, DUF4867, Domain of unknown function (DUF4867). This family consists of uncharacterized proteins around 220 residues in length and is mainly found in various human gut Firmicutes and a few eubacteria species. It is also amply represented in human gut metagenomic datasets. Distant homology analysis and marginal HMM overlaps suggest this family is a distant homolog of Ureidoglycolate hydrolase pfam04115, but this prediction is not verified by experiment, therefore the function of this family is still unknown.	2.20145e-88
NZ_CP048003.1\|WP_003569189.1\|199118_199904_-\|alpha/beta-hydrolase	gnl\|CDD\|223730	COG0657, Aes, Esterase/lipase [Lipid metabolism].	2.12939e-22
NZ_CP048003.1\|WP_003569173.1\|209872_210391_+\|galactose-6-phosphate-isomerase-subunit-LacB	gnl\|CDD\|181506	PRK08622, PRK08622, galactose-6-phosphate isomerase subunit LacB; Reviewed.	1.64063e-103
NZ_CP048003.1\|WP_003587361.1\|203240_206366_-\|SMC-family-ATPase	gnl\|CDD\|223496	COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair].	1.3057e-77
NZ_CP048003.1\|WP_011674244.1\|196803_197436_-\|hypothetical-protein	gnl\|CDD\|227169	COG4832, COG4832, Uncharacterized conserved protein [Function unknown].	3.18158e-11
NZ_CP048003.1\|WP_003573966.1\|201774_202251_-\|Hsp20/alpha-crystallin-family-protein	gnl\|CDD\|107228	cd06471, ACD_LpsHSP_like, Group of bacterial proteins containing an alpha crystallin domain (ACD) similar to Lactobacillus plantarum (Lp) small heat shock proteins (sHsp) HSP 18.5, HSP 18.55 and HSP 19.3. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Transcription of the genes encoding Lp HSP 18.5, 18.55 and 19.3 is regulated by a variety of stresses including heat, cold and ethanol. Early growing L. plantarum cells contain elevated levels of these mRNAs which rapidly fall of as the cells enter stationary phase. Also belonging to this group is Bifidobacterium breve (Bb) HSP20 and Oenococcus oenis (syn. Leuconostoc oenos) (Oo) HSP18. Transcription of the gene encoding BbHSP20 is strongly induced following heat or osmotic shock, and that of the gene encoding OoHSP18 following heat, ethanol or acid shock. OoHSP18 is peripherally associated with the cytoplasmic membrane.	8.90883e-46
NZ_CP048003.1\|WP_003563790.1\|195910_196732_+\|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase	gnl\|CDD\|238574	cd01169, HMPP_kinase, 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate kinase (HMPP-kinase) catalyzes two consecutive phosphorylation steps in the thiamine phosphate biosynthesis pathway, leading to the synthesis of vitamin B1. The first step is the phosphorylation of the hydroxyl group of HMP to form 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate (HMP-P) and then the phophorylation of HMP-P to form 4-amino-5-hydroxymethyl-2-methyl-pyrimidine pyrophosphate (HMP-PP), which is the substrate for the thiamine synthase coupling reaction.	4.1808e-94
NZ_CP048003.1\|WP_003563745.1\|207547_208174_+\|HAD-IA-family-hydrolase	gnl\|CDD\|372595	pfam13419, HAD_2, Haloacid dehalogenase-like hydrolase.	8.24385e-35
NZ_CP048003.1\|WP_003563776.1\|198447_199116_-\|NAD(P)H-dependent-oxidoreductase	gnl\|CDD\|376808	pfam02525, Flavodoxin_2, Flavodoxin-like fold. This family consists of a domain with a flavodoxin-like fold. The family includes bacterial and eukaryotic NAD(P)H dehydrogenase (quinone) EC:1.6.99.2. These enzymes catalyze the NAD(P)H-dependent two-electron reductions of quinones and protect cells against damage by free radicals and reactive oxygen species. This enzyme uses a FAD co-factor. The equation for this reaction is:- NAD(P)H + acceptor <=> NAD(P)(+) + reduced acceptor. This enzyme is also involved in the bioactivation of prodrugs used in chemotherapy. The family also includes acyl carrier protein phosphodiesterase EC:3.1.4.14. This enzyme converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine residue from ACP. This family is related to pfam03358 and pfam00258.	4.81778e-31
NZ_CP048003.1\|WP_003569186.1\|200114_201218_-\|A/G-specific-adenine-glycosylase	gnl\|CDD\|224115	COG1194, MutY, A/G-specific DNA glycosylase [DNA replication, recombination, and repair].	2.81936e-124
NZ_CP048003.1\|WP_003563743.1\|208618_209395_+\|DeoR/GlpR-transcriptional-regulator	gnl\|CDD\|224268	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism].	1.34504e-74
NZ_CP048003.1\|WP_003569171.1\|210429_211431_+\|tagatose-bisphosphate-aldolase	gnl\|CDD\|183502	PRK12399, PRK12399, tagatose 1,6-diphosphate aldolase; Reviewed.	0
NZ_CP048003.1\|WP_003569175.1\|209399_209828_+\|galactose-6-phosphate-isomerase-subunit-LacA	gnl\|CDD\|181505	PRK08621, PRK08621, galactose-6-phosphate isomerase subunit LacA; Reviewed.	1.46767e-74

>NZ_CP048003.1|WP_003573966.1|201774_202251_-|Hsp20/alpha-crystallin-family-protein
MANEVLNRRNNELMNNVNDPFFDNLARRFFGPVSDWMDWATPAITSTAVNGLLTDVKETKDAYEVHVDVPGIDKNNIKMNYHDGVLSINVHKDDITDHADKNGNVMMSERNYGTMSRSYQLPNVDASNIKAAYQDGVLNITMPKLTESKESGHNIEIQ
>NZ_CP048003.1|WP_016363499.1|201547_201781_+|hypothetical-protein
MFRFLTEPFRALQKNHPNDHTYRWDDFNDSMITATAAILIDFCLLTHGFCPLTAEVPLLFMLAMQSVNLGSTDDEHY
>NZ_CP048003.1|WP_003569186.1|200114_201218_-|A/G-specific-adenine-glycosylase
MTNKLMNWPPEKVAAFQKALLNWYDQHARQLPWREDHDPYHVMVSELMLQQTQVQTVIPYYERFMNQFPTVGALAKAPEAEVLKAWEGLGYYSRARRLQQAAKQIVADYGGVWPQTSETLQTLSGIGPYTAGAIASISFGEPVPAIDGNAFRVFARLFKVDADIARPQTRQIFFDLIQPLMPKDRPGDFNQAVMDLGSSYMSANHPDPAHSPVRDFDASYRDGVVSAYPVKTKKPRPVLHRYFALVIRSEKGYLLEQRPSTGLLADLWMFPLVDMADLESTMMSAQLDEVSTLFAASSGMQLTFADLGAKTVKHTFTHQQWQLTLIGVETAASDLSFLPARWVKADHFSELALPTVQKKLNAALGMN
>NZ_CP048003.1|WP_003569189.1|199118_199904_-|alpha/beta-hydrolase
MTVNVTRDIAYGDAALQKLDFYEPEKSNGAAILDIHGGGWFRGEKNKEGEMAERFAALGYTVAVPNYRLAPEAFFPAARDDVLAAFSWLREHTKGLQLGVFGSSAGGSLSVDVGLAEGVPTVSWSGIFDIRQWFADHPAVVAQPDTKTDFVKTASAKIDQGGRNDPFYKWFILNYVDSDETKFPEVEPFDRLTAQAGPLYLANSQEEIIPISGIYQLAHAAEKLGLPVTLQSIPGGQHAEGYLDEAWQGTVAFFAQYLLKG
>NZ_CP048003.1|WP_003563776.1|198447_199116_-|NAD(P)H-dependent-oxidoreductase
METLVVVSHPEIEKSDTQQFLKASAASLSQVVWHHLDSRLPFDVTAEQQAITSADRLIFQFPLYWYMAPASLHQWLTDVWLKQFVYDARGGLLHGKSLGFVVTFSQPATAYQLGGSVGFSISQFLTPYAALAAKTGLTLLPPLTIAQFANQTDLEHQQLLVRYQQYLTLDHPDRPDEQAQWFIDRLSGNADTQLLADQLAAQTDDIDRLRLTLHELKAGESE
>NZ_CP048003.1|WP_003563777.1|198271_198451_-|hypothetical-protein
MTTDEQWLVNAAAVQEKQATSYENAAFFRALQAFVTQQAKRRESLEGEIDGRSWNHEQW
>NZ_CP048003.1|WP_003569192.1|197669_198194_-|hypothetical-protein
MQTMFDRLQRWSWLRGLLMILIGAWILIAPRQVYRSFIWIVAAVLIIAAIPKLIDGFSARKASGTYGTSLFTGGFYLLLALMVPVIVRPLMSLGPLLLGIVLMIYGVNKILSARNRQQFVNVSVWPTVIYGVVLLIMGFIMALNPFRTVMMVFSFFGGLLVVMGILQLFTRPRA
>NZ_CP048003.1|WP_011674244.1|196803_197436_-|hypothetical-protein
MHKFDWREVERDEYSRSEEPSFVKLTTRSYITAMGVAPDRVTDQAFTSLAAAVTQIAERISEGPDAGIDIPNFKAYHPYPLQAVWSGGDKISKRHIFRLWLKQPLFIHEDQFEAALTQLHFEPAIAQQLHLEQLAEGFEIQSFNSTPLTDEAPAIARIQTVINRDHLVPKFDDRHREVYLEGYQGEVPVLYRVPLDENFGEVGDEQVAYN
>NZ_CP048003.1|WP_003563790.1|195910_196732_+|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase
MANEFPQVMTIGGTDSDGSAGVQADLHSFFMRGVYGATILTAAVAGNSYGIQDSMVMPLPFIDAQFKSLAADLHIRAAKTGMLADRALVQNIIKNWQQYDFGALVVDPVIITKHGAMLLEQDAYDAVKNELIPLATVVTPNHYEAEHLTGMKLDTDAQTEAAAHQLQDSGAKNIVLKGAHDDPTQPTVRDFVLLESGKSFWLSEPYHATDRVNGTGDTLSAVITAEIGKGNSVEEAIRIAKRFTNQAIGHPIAVGHQYGPINHWANKIVYPQF
>NZ_CP048003.1|WP_003563792.1|194675_195737_+|hypothetical-protein
MLNLNDAHLAALITKPLTVAQARQQIGTAYQQEADRLANSPLWESNDEALTALLASYTNLLGNKLYQALQNLTSIPTPFLQTLWLQDTTADAHHSEIAVIQTTQDDNNTLLTIVDPLSDDAKLKAVNLPTLLQITAADSNAMTYDAETVKALSALAKALNQGGYRFTTVDETVLQPVNGLSFKTRFDNLKPLVAKKAVIKAGDFSIGTSLDQDAKVLGYQVLDEDGHDWQDLGSEEVKNDRFEWASTTVPQELVNHRLKLIIRVSAGSNSPALDELFVIASNNAILMRQGAKAGVYELPLPNQKIFTVMINPANNMVYLKYPDPETQIIELNHQYPFIGEWLKAVLPQKRAFN
>NZ_CP048003.1|WP_003587361.1|203240_206366_-|SMC-family-ATPase
MQLKQLHMQFFGPYADAVVDFDDFRTSPLFLISGPTGSGKTTIFDALIYALYGETSGERDGGQMRSNFAGNSDLTKVTLTFDHDGKHYLIERQPPQLQSKKRGDGLTEVKAKVLLAISSDEKQVAEYRKKNQVQEQLDAVLHLDASQFRQIVLLPQGDFRRFLDADSNAKEDLLRDLFGTQLIQRWQTAMLAQMKAKGAAIQDQERMLDVLMSQFDFETAPDEHATMADKLSLMRATVASQAKVVTARQATAAQSHQRYQEAQTALQQGQQLAQAFTEREQAATALAKLAEQKQTHQKQLKQIEQLTWVQQHENAAQRVQKAGQDLKAAIVQSEQTQAALTTTEQKFSLDKQALARLQAKSDQIEAQKKQLNSLQAVQQQLTAIAEQNKQVIKQAAIVNEAELALTHAQQQLTDAQTVKTQQQTSLDNLGLDELINTVNTQRNLLAALVPQAANYQEAQADVAQLSMAIKKTQVTLEQAETQVAATTSHLNKLQQTQIRQQIAHLAAKLEPDSPCPVCGSTSHPHPALVVDEPLVSEAALKQADQERQKAAARKTMVETQLANLETQLKTAKAKTAQARQAFTEHWQEQAKLIAGVADKTGILQQLTALKTLAATNEHQLTEAQTEHAALQVALKKSDKAITTGTTKVQQCEASLNTARIDAAEAQSALKTMQKNLPAEATDLATVAAQATTLQTTITTYQAQLQEAQARVNALDRQLAGLQADEKHAAAQVTALTKEQAEAKATFTIAVTQYFGADGKQRFAELQLRVSQLPLLNEQVQTYEHTQLKQQTLLDAANKTIGTQAQPQLDQLEAEATAAETTATNDQTALIKISQAHDAAEKLAKQAATIFTANQTALAAYADLQTLATVMNGNGPKKLSLERYVLQAYLQEILNVANSRLQVLSNNRYQFVLHTSLGTQKIHSGLEIDVYDDQVGEKRAVQTLSGGESFIAALSLALALGEVIQQESGGINIDALFVDEGFGSLDANSLDVAMNALESLEGESRLIGIISHVTELRDNIPDQLQVEPAGTGRSRLKILHSA
>NZ_CP048003.1|WP_016381496.1|206365_207487_-|exonuclease-SbcCD-subunit-D
MRFLHTADWHIGKKLNDFDLLEDQQAVFEQLVETAETHKVDAIIIAGDLYDRALPSEAAVSVLDNMLIKLNRDHGYPLLVISGNHDSAVRLRTGRAWYAATKMFVNTQVAEAFTPIELDGVQFFLLPYFEPFAVRDYFQDKTITNVAQAIRPIVAKMKTLFKPDMRHILVSHFFAAGTDHSASETKVNVGGLDAVPLDDLAAFDYVALGHLHNHHALHGEPKIQYSGALLKYAVSEAHQEKGVYIVDTETMDREFVPLKPKHDLIELKASYADLTAPAYYQQQDRDAYIGIDLTDTQVIPNVMAQLRQIYPRIISLRRENGVNAVKPLQERQRDLDPMSLLQTFFKDMTQDDLSAAQIKWAKAGLTTAKKEQA
>NZ_CP048003.1|WP_003563745.1|207547_208174_+|HAD-IA-family-hydrolase
MNTFIFDIDGTLLDNVEAYLYGLQKTLRRHGREVPIHELTWTNGRAGVDSLAELGFSAAEIPEVHEQWREDSKEFLTDIAWFPGMQHALNQLKQTYKLGLVTSKDKTQFIEEDKKFHFSPYFDAIVVAGEAKRNKPFGDPITLARERLGSEPASTIYIGDTPTDAQAAADAKVAFALAGWTTPPSNEVMPRVAVLQQASDLLTLPTLA
>NZ_CP048003.1|WP_003563743.1|208618_209395_+|DeoR/GlpR-transcriptional-regulator
MLKDERLLTIRNLVDRKGIVTVNEIGESLGVSTMTVRRDLEELADQKELVRIHGGAQSTNFKPLTELSRNEKRSIHVNEKRKIAATIAALIIPGDTIYIGPGTTNEMIAQYLKKPDVRIITNSLPVFQSFQDRADFFSLQLIGGRLRARSGAFIGSLANEMLAHLTTTKAFISVNGIADNHISNASPEEGQTQRIALDNAGMKLVVADHFKLNRQDFYSFYDLDQTDGLITDPGISRDDLQHYNTFTHVITDKTNKGE
>NZ_CP048003.1|WP_003569175.1|209399_209828_+|galactose-6-phosphate-isomerase-subunit-LacA
MDVIIGADKDGFAMKEQVKKYLEDHQYRVKDMTPEPAEDFVDSSLAVTKELLSGDAHKAIMFDRYGMGSAMASNKVKGMVTAVVEEENTAHMTAEHNGAKAIAIGTGITGYDRALVIIQRYLDTEYAGGRHQIRLDMLEKMI
>NZ_CP048003.1|WP_003569173.1|209872_210391_+|galactose-6-phosphate-isomerase-subunit-LacB
MIIAIGNDHIVTMQKIEISNMLKDMGYTVIDEGTYDTHRTHYPIYGKKVAEDVADGRADLGIVMCGTGIGISTAADKNDGIRAAMCDDVTSAVYAREQLNANVLGIGGATVGIHMIQDIVKAYLDATYKETPQNKKIIDKIDNIAKPNPEQKDNPHFFDTELEKWAEGVYHD
>NZ_CP048003.1|WP_003569171.1|210429_211431_+|tagatose-bisphosphate-aldolase
MTVTLTAGQYKHLQQLSDDNNIISALAIDQRGSLKKMLAAAANKPADETTIVDFKKAVSEELTKYASSILLDPEYGLPAAKVRAPQAGLLLSYEKTGYDATEPGRFPDLIDDQSALRIKNEGGDAVKFLLYIDPDEPDAINDRKYAFVERVGAEAKANDLPLFLELVSYDGTLNETGTAAWAKVKPDKVIKITKEFSKPQYNVSVLKVEVPVDQKFVEGFTDEGVTPVYTKEEAAKYYKAQSDATDLPFIFLSAGVSNELFLEELKFAKQAGSTFNGVLCGRATWKPGVKPFAAEGEAAGKAWLQTEGKANIDRLNKVLAETATPWTDKVEHA
>NZ_CP048003.1|WP_003569169.1|211545_212484_+|tagatose-6-phosphate-kinase
MILTVTLNPSIDVSYPLEHLKIDTVNRVKTVRKTAGGKGLNVSRVIHMLNHEITATGFIGGYFGKWLENQLDRDGIDHDFFPIDAETRSSIAMLHDGGEQTEILEAGPTIAAEDAEKFLSHFDSLLDKSDLITISGSMPQGLPADYYTQMIAHAGQKNVKVLLDTSGATLKSALEAPVKPLLIKPNEEELGGLLNRDVDKTDYTALKHDLMDPIFDGVDWIVVSLGAAGAFVKHLDKFYHAAIPKIKVVNPVGSGDSTLAGLAMGIHDGKSDEDIMKTAMTTGMLNTMEAETGFVNPAKFDEYFAKVTIESY
>NZ_CP048003.1|WP_003569168.1|212505_213186_+|DUF4867-family-protein
MSTIDQLRTLNPDKTIHSLDEAAFADYGVTYAQYDVSELKTFMDQHVTIPAPSEANLYVPSNPDMEKIPVVQQIGRDVYAGLPIEAGECAGHAEALTAVEFHQGSEVNVFFTDVVMVIGKRGQMHDDQFNAEKDAKLFFVPAGTVVEFFSDTLHYSPCEAHASGFKFIVMLVRGSNQPLPADYHTDNKLIVKQNKFQVVHASRTDKIKQGIQVGVTGELVRVKHLN
>NZ_CP048003.1|WP_003569166.1|213629_213824_+|hypothetical-protein
MTARRKTYLLWLALVTFVAIINGIFKNSLTQVLVMVTACYALYQLLKMDHVFDRKKRRENRASR

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Crispr_ID: NZ_CP048003_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048003_2

375225-375313

Orphan

Consensus_repeat	Method
GCTGCTGGTGCCTCACTGGCTGGTTCTGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP048003_2

>merge|NZ_CP048003|2|375225-375313|CRISPRCasFinder
GCTGCTGGTGCCTCACTGGCTGGTTCTGTGCCACTCAACGAAGCCATATCTGGCCCCGTGGCTGCTGGTGCCTCACTGGCTGGCTCTGT

>NZ_CP048003|2|2|375225-375313|CRISPRCasFinder
GCTGCTGGTGCCTCACTGGCTGGTTCTGT	GCCACTCAACGAAGCCATATCTGGCCCCGTG
GCTGCTGGTGCCTCACTGGCTGGCTCTGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048003.1\|WP_003572355.1\|383484_383751_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048003.1\|WP_016382059.1\|381776_383018_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048003.1\|WP_003589979.1\|371916_373845_-\|type-IV-secretory-pathway,-VirB4-protein	unknown	unknown	unknown
NZ_CP048003.1\|WP_003587040.1\|368247_368427_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048003.1\|WP_016383324.1\|384722_385586_-\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP048003.1\|WP_003582220.1\|383762_384041_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048003.1\|WP_016382056.1\|376740_379197_-\|type-IV-secretory-system-conjugative-DNA-transfer-family-protein	unknown	unknown	gnl\|CDD\|226036
NZ_CP048003.1\|WP_003593118.1\|367952_368207_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048003.1\|WP_107791771.1\|385631_386573_-\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP048003.1\|WP_016382054.1\|374405_374741_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048003.1\|WP_016382051.1\|369840_370248_-\|thioredoxin-family-protein	unknown	unknown	gnl\|CDD\|239245
NZ_CP048003.1\|WP_003572360.1\|383060_383288_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048003.1\|WP_016382053.1\|370904_371915_-\|peptidase-M23	unknown	unknown	gnl\|CDD\|223862
NZ_CP048003.1\|WP_012491056.1\|379810_380230_-\|single-stranded-DNA-binding-protein	unknown	unknown	gnl\|CDD\|239942
NZ_CP048003.1\|WP_016381677.1\|373825_374422_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048003.1\|WP_016382058.1\|380239_381799_-\|DUF5011-domain-containing-protein	unknown	unknown	gnl\|CDD\|374521
NZ_CP048003.1\|WP_016382050.1\|369029_369851_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048003.1\|WP_016382049.1\|367525_367963_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048003.1\|WP_016382052.1\|370244_370889_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048003.1\|WP_016382057.1\|379223_379802_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP048003.1\|WP_016382051.1\|369840_370248_-\|thioredoxin-family-protein	gnl\|CDD\|239245	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functional TRXs have been reported in most organisms; in eukaryotes, they are located in the cytoplasm and the mitochondria. Higher plants contain more types (at least 20 TRX genes have been detected in the genome of Arabidopsis thaliana), two of which (types f amd m) are located in the same compartment, the chloroplast. Also included in the alignment are TRX-like domains which show sequence homology to TRX but do not contain the redox active CXXC motif. Group II proteins, in addition to either a redox active TRX or a TRX-like domain, also contain additional domains, which may or may not possess homology to known proteins.	9.11076e-10
NZ_CP048003.1\|WP_016382053.1\|370904_371915_-\|peptidase-M23	gnl\|CDD\|223862	COG0791, Spr, Cell wall-associated hydrolases (invasion-associated proteins) [Cell envelope biogenesis, outer membrane].	1.43747e-17
NZ_CP048003.1\|WP_012491056.1\|379810_380230_-\|single-stranded-DNA-binding-protein	gnl\|CDD\|239942	cd04496, SSB_OBF, SSB_OBF: A subfamily of OB folds similar to the OB fold of ssDNA-binding protein (SSB). SSBs bind with high affinity to ssDNA. They bind to and protect ssDNA intermediates during DNA metabolic pathways. All bacterial and eukaryotic SSBs studied to date oligomerize to bring together four OB folds in their active state. The majority (e.g. Escherichia coli SSB) have a single OB fold per monomer, which oligomerize to form a homotetramer. However, Deinococcus and Thermus SSB proteins have two OB folds per monomer, which oligomerize to form a homodimer. Mycobacterium tuberculosis SSB varies in quaternary structure from E. coli SSB. It forms a dimer of dimers having a unique dimer interface, which lends the protein greater stability. Included in this group are OB folds similar to Escherichia coli PriB. E.coli PriB is homodimeric with each monomer having a single OB fold. It does not appear to form higher order oligomers. PriB is an essential protein for the replication restart at forks that have stalled at sites of DNA damage. It also plays a role in the assembly of primosome during replication initiation at the bacteriophage phiX174 origin. PriB physically interacts with SSB and binds ssDNA with high affinity.	3.62594e-05
NZ_CP048003.1\|WP_016383324.1\|384722_385586_-\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	6.01314e-31
NZ_CP048003.1\|WP_016382056.1\|376740_379197_-\|type-IV-secretory-system-conjugative-DNA-transfer-family-protein	gnl\|CDD\|226036	COG3505, VirD4, Type IV secretory pathway, VirD4 components [Intracellular trafficking and secretion].	1.82184e-45
NZ_CP048003.1\|WP_016382058.1\|380239_381799_-\|DUF5011-domain-containing-protein	gnl\|CDD\|374521	pfam16403, DUF5011, Domain of unknown function (DUF5011). This small family of proteins is functionally uncharacterized. This family is found in Bacteroides, Prevotella, and Parabateroides. Proteins in this family are around 230 amino acids in length.	1.81632e-14
NZ_CP048003.1\|WP_107791771.1\|385631_386573_-\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	4.48661e-33

>NZ_CP048003.1|WP_016382054.1|374405_374741_-|hypothetical-protein
MAHKVIYSRRLIVKGQYNKLLTIRDVFIAGAVSGATFVVLIVTTPMAVALFGLILMFVLTAALRIQSGVPQKNNLQVMKQLLLRKRTIYHAIDDPIRQLLFKRGEHRGNKV
>NZ_CP048003.1|WP_016381677.1|373825_374422_-|hypothetical-protein
MATKFDAVEARKRQKEAAKKKERKDGVGRIYPVVGITNSGYIKLAHNGLLFYADVFKPKSFDLFELSVQDADQIESELWGLHQQYPGSIKELYMNFPETNQRQQTYFRRKIEQTRNPIYLELLQHDLAVLKQLEKTYRKLSSWIWFFGDSVPELERNLELARHASTLYTFERAGLAEKEKMLQMMNNPEVSVSETEEA
>NZ_CP048003.1|WP_003589979.1|371916_373845_-|type-IV-secretory-pathway,-VirB4-protein
MKLKKLDLDQHFVFKTQPAGGIDTRNELYLNMGDHYMTTIHIFDIPEEFSDFWLTGITEIPGVTTTVDTVNNTKADFVDNIAEAITELTVQLDHAKNIADSDEIQNEIDPLRSLSLALRKDGEVIRQTYIRVYCYAATRDQLERKVNEVVKQIRKMSFKASVFLGEGMEEYQAMFLPAGEQRYLKNAREGIPLSGEVLGLSFAHNQTSLNDPFGSYFGYTQTGGTVYWDQFLVDKQRTYYNLFLSGDLGSGKSTQLKKIIWERAIRSDLVRIFDRSGEFRDTVHALGGKVVSLDGRDGTINLLQVYPSVTVGDSNEVDPVGSYKAHLKDLSVKYRLFNHDASGQEAQYFATQCDGLYRQLGLLGDSIGLTQKPFITERDANDYPTLSQLIDFVDQKRQNRTDDMEKKLLDHIYVTLNNLRKTYGELFDVHSTLPDYDGELVVSYDLSALADSYPEEVQDLQIYNALISSYNVCMKQGRIEKKAFDDGERSLEDIHHFLLVVDECHTLLNTNKAYVADLFVRIMSEDRKAFGAICLATQRLERMFPSGDNAQDRDTVSAINALRQIYTLCQYKIVLKHDATTIGTEKNPRILRQLLGDILSPSEFLQIPKFDKGEAMFLLGSEKLHMHFQVTKQELAIFKGGA
>NZ_CP048003.1|WP_016382053.1|370904_371915_-|peptidase-M23
MKTLSKRWLLRLIFGSLSSFVLFFVLFMVLIAAMFAGLNDKKGGGSDCDITGSISATGNFNKDTYQQAWAKYFTSGVLKDEADYTIKAANKAGVSPALFASIMGHESGWGKSSAVRNQNNPSGQMSGSTIISYPTIEAGIDATVATLHNLVVERQLSTVEKLGSVYCPVGAANDPTGLNASWVPSVKKTMLEFGADASATLAMTCNSGAGSMGNGSAIITEAKKYLGIPYVWGGKSPATGMDCSGFVGYVLMQVTHKSYPQYTVSLESKGTMLFNGGKPVMSELQPGDMIFYGDHGASHHIAFYAGDGQVIEEPEPNDVCHIRPYKDYEPDFAVRP
>NZ_CP048003.1|WP_016382052.1|370244_370889_-|hypothetical-protein
MNRKTMLVSVMMILALGAGVYGWTSANTANKNISQQKQELRTMASKNGSLETQLEALKLSNQADRASNQADNASKKSTTTSSQSDNLTDTTQKMTAMMNGLLQGMYSPKTATTMGQYEAMKPYLTGEAIQSFMPNRDTPISANGFQESTINDLRIFVTPQGDDYLLMARYELGNNKTNTNKKTTMVFQGTVRKVSNDYKLAAFDSNRALSGVTP
>NZ_CP048003.1|WP_016382051.1|369840_370248_-|thioredoxin-family-protein
MKHPFRHFLINAVIGVVISTVSLSALYVYAPKKMIDVATPVTINAQKKDQYILYYSPTCSVCQQVYRTYFWRSVTGQLKFASVANEQNREAAAALGITKVPTLVHYKKGKVVTQYTGHQEQQIDKVLAGGKAGEH
>NZ_CP048003.1|WP_016382050.1|369029_369851_-|hypothetical-protein
MNIKMMNQGIHFQDKNKYSLRYVKLLGILLAAFSLLIFAIVLWPRQTDNKQISLGQTFDQGNNQFQFAGVDTDKQNAAMYFYVTKNTIDPLAPLTTVVVTKKTHSGNDFHTQLKQIADDYYVVKLKKSAISNGRLFVKLGSGKDLSGVTSAIDFVLLDLRHPTKVTSLTEGVYLKNYLKILRSNTTNRVASLEKKLVQYNHDLQILKTSLARQKDTANLQVGKQKRATEQRMTQTETNIQDKKQDISDTQSAIKVAQNNLQSYEKRYQHYAHH
>NZ_CP048003.1|WP_003587040.1|368247_368427_-|hypothetical-protein
MDKQNETRRVMMTLSDQAIAKLDHLVAEKQRELNQNPELAKYNLRLNKSNILEAWLSKQ
>NZ_CP048003.1|WP_003593118.1|367952_368207_-|hypothetical-protein
MAELKVRDLSEQDLAGIESSAKRAHLSREAYLRELIHHDATDHLLSGDVSDLRELTRQMAIIIEQNTKAYLDFVDAVRRLPSEN
>NZ_CP048003.1|WP_016382049.1|367525_367963_-|hypothetical-protein
MRIRKTVTLDSNLEGFANPEDVQKYMDQNDLKTLSAALKSLMDEHHQLSQQVTQKQQLVHEIVQGIMEQLKPTTKKVTMTDRNLLVLLKLFDGVVVQNGWDNLPIPDDTMKPTTVARQIVSDQIKTEYIRQQTTQVHHRGGGADA
>NZ_CP048003.1|WP_016382056.1|376740_379197_-|type-IV-secretory-system-conjugative-DNA-transfer-family-protein
MNHEKRQWREALGNKRFLIAMAGLWLIGGLLLLNWLTHIPSMFLKLMKQAPSLQTIVATVLHPANFLWPDFTYLLVVLLYLVGLVALVIYVLIRTYRWRKAFQSINTGQKGTGRFARVAEVAAASIAIPLNDYPYVGKSGVPQLHIKKDQMDKYELKTVVQQYRGADQHHGVDLVDTSGTNTVAVAGPGGGKTTLFSLPVLDFIMRASVHDSVIITDVKGEMLRSTKAEFEARGYRVAALNLVDPTYSIAYNPLELVKQAYAAGDFDNAQMLCNTFSYSIFHNPNAKEPMWEQSSISLLNALILAVCKVCFDQHTPEKITMYTVTTMLSELGANPDENGMTKLDKFFSKLPSGDPAKLQYGTIQFSQGITRSGIFTGTMAGIKNYAFSNIGRLTATNDFNIADLATGDKPVAFFIIYPDYDNSNYSLVATFLSQVGYVLAKMATLAADSKLKRRVINLYEELGNLPRIEGLPHYLNVGRGRGLVYYLILQSIAQLEANYGKEGAAEIMGACGNKYDILADNYDDAEYFSKQIGQTTVIAPSRHGAPMDTDKSFGESQETRRLMMPDELLRLRKGEVVLIRSKQRSDLNNRSITAWPIHANPDEGTELPFSFEYLTRFNHQATFAELYGDKKPAHNDIDLKKLLLDITVTTIEPQNEHDDPEITVKVNGHSLNAENDEPQVEQYTSEQAATDENSDQNTENTPALDLKKSTEDSKSDQDNIHRSEEPEPKDPKKQITTEIDQQATPLSTLFSKSQLQMIEKGVQELLTQDDYAEYQSLDSVEAMTHWLNARRAMKSFAAQLDFAYQKLDAFKKKEGDNA
>NZ_CP048003.1|WP_016382057.1|379223_379802_-|hypothetical-protein
MRAIKTISSFTSDGLDDRVNETTRYLISAGYQVIGISVAGEWCKTATIIYETGVSADQMKPTTLRQHSERALGLIVSLLALVLLYHALPAALLTQSQLYQFVLTAAALVCAVFFVQSLRVIFPQWGIMIGLLVLAVYAHIIEQDIYGIKEHPLMLIVITIIVALALYVLKIAYQRLRRVYWRLVEWMASRHE
>NZ_CP048003.1|WP_012491056.1|379810_380230_-|single-stranded-DNA-binding-protein
MEDINSVQLSGTVITDVKHRQNQDFLTASAYLECIRDHQDRTKKVNVPVKLYNETAADFVKNVKLGDRVLITGRFDASVFSEAPGQSTTRYFIMAASFVKIVKEAAPVVDDQLTNPPKAANDTPIDSSNYSNVLPGGFN
>NZ_CP048003.1|WP_016382058.1|380239_381799_-|DUF5011-domain-containing-protein
MKNQQTNNKKRHIIITTTAVALLGAGGLWAATQAHSDQQATHTSSYQTKMQKPKASKGSQAKKEKGKNTVNDIIDQALGDSSTSTSSEDHAFKSATNSVLDSNPIAAIAKTLDTPAAKASLAAATAAVEPPKTLNDNSDDTASVKPLTNGTTDTSQTDQGKTNDDGKTPTPVNPIEPLDPDKPVNPITPVNPDNPDNPVNPVDPVNPVNPVQPEQNTAPVLNVPEDQTVSLSHNGTFDALNGVTASDKEDGDLTKAIKVTGNVDLSKEGTYILTYSVTDSAGQTTSAKRVITVANDLPVISADDQTIEVGTSFDPVVNVTASDVQDGDLTKDIKVTGNVDTTKLGTSQLTYSVSDHDGGQTTKTINITVYAKDASFSGLDALTVQQGSTPDLRKGVSVSDPYSATPSDFTVTACDTKTLGQKSVTYSYVDKWGHVTTKDRVINVVAEKPVFKGLQDQTIKLGDHFDPMNGVSATSTNGPVTISYEGEVNTQKAGRYTLIYTATDQNGQQTQQTIVVTVE
>NZ_CP048003.1|WP_016382059.1|381776_383018_-|hypothetical-protein
MYAKFECSRKLRQFLKKKRQLSLSEAEKMISAADDYAIQHHFKEDVNFKIIGQDGIEYEDNLPIGTGQGWLHNLLLILDHAYQTVLSDQSSEAFKAFSDRVRQELTIEEQPKAVQENLPVVARQEKAHHLKPIVSKEEEAVRKAESSAPAAAKQKPQKSKPVPLRRQARKKPMWQFPQLKRPKIRLSAQIIKRFVLAAATILVVAIFMLFLMRPKPVPSYQTLIQNASYVQAAKLYPSKHSDIEARLVKDNDEKSLAAFVQKYPSNNGRFDLAYMQKKFSTVISVSQDANLTAVRKVKLAISYIYQNQPENALTINSEIKSPQLQQLIFLALIHEGELDQAATLAKSMNSKDADKVLEVGKTYQAAYEKAKTDANNPKLSETDRKQALKDQHNWLALRKSLGGKSPYEESTNE
>NZ_CP048003.1|WP_003572360.1|383060_383288_-|hypothetical-protein
MQGKVIALLSAILGFIIAIAGGYAAVKFGLMGIAHMTKDQQKIREARDGMTNVAIGLIVVIFASAAVAWLQGLAG
>NZ_CP048003.1|WP_003572355.1|383484_383751_-|hypothetical-protein
MFNLVLQTKDIKEAKRKNGLLEIRFPHPKEKALMLKLRHAVLSIETGWPILPDTTCIGEIVRVLPSKDRVIVAYVRPQNGFQRFVESH
>NZ_CP048003.1|WP_003582220.1|383762_384041_-|hypothetical-protein
MAEPVGIWLHDRNLKLISKDHDALSYRVRASWVKDHADYPIKPGMTVVIGNIKPPNQLKNVLVLKVGSAELKRDGSLVISGERIKSVPKNLI
>NZ_CP048003.1|WP_016383324.1|384722_385586_-|IS3-family-transposase
MIHSGRKAALFMIQDQLSRGHRITVILRALRIPSSTYYDWLKWHPKSRNRRRIKLKELVQVLWQRRKFYGYVRIAKRIRKLLKCRLSDRTIWKVMRELGIQSTMYRKRSKKPTTTTDMPQKPNLMRHLADLSEVVTTDITYIQLINPKWVYLATAYDPKARKVLAWQVGQQMTQDLAVAPIQALIHQGYTFKMVHSDMGSQYTSRLFETTLTDAHLRHSYSRKGKPADNGRIEAYHSLLKREWVRLDQINYESILDVTESIARYNTFYNHDRETNGRGACKRKSAAA
>NZ_CP048003.1|WP_107791771.1|385631_386573_-|IS3-family-transposase
MGKKECRSDEQYQTIQQLAQEVNPDAGKLYGISKACRMMGVSRAAYYKWTHRKVTVHEQENQAIRDYIIELEEKNHYVFGVKRLMTYINAETQYHVSHGRVRRIMRLAGIRASIRVAKRDRQVEKKAFLLVNKLYTVNMGHAFHPVAPNVVWVTDCSEITYGKDNKQRLRLSAVKDLHDHSVIAWCVAPTETADLATKTMKLAIENNDGIKPDTVHSDQGTAYTSSTYNTFLAGEGITHSMSRPGTPGDNSPMESLWRHLKIERFSFEHCLSELEMMKRIEAAINWYNNERRQETLNGMTPMTYRNHAVKKTA

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Crispr_ID: NZ_CP048003_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048003_3

1714638-1717313

TypeII-A

Consensus_repeat	Method
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	PILER-CR
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CRISPRCasFinder
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CRT

40 spacers

csn2,cas2,cas1

The CRISPR arrays of NZ_CP048003_3

>merge|NZ_CP048003|3|1714638-1717313|PILER-CR,CRISPRCasFinder,CRT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCTACAACGAAGCCATTCGGAAATTAGCAGCGGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCTTGCTCATATTGGAATCAATGTCTTTCGCGGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCCAGTAGCAACATAAACCCTAGTACCAATAAGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCCAACCTTACAGAAGTTCTTCAAGAGCGGTTGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCGGACGAGCAAATCTAACCGCTTCGGGCCAAGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCCCGAAGGATAAGCCAATATTTGTACCAGACGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCGACTTCGAATGCTGAAGAACTAGCTGATCAGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCGGGGCACCTCGATATACGGGTACCCCATCTGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCCGAATTTAAGACGATGAAACTGCCGTATGGGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCAGAGTTTATTCAGCATGATAGTACCAAATTGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCTCAAATAGCCTCTTCGAAAGTTAAAGGAGGGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCAGCGTGGCGTAGCGCTAACTTGTCATTTTTGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCAAAAATTGGGGATTGGCAAGATTACGACTGGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCTATTTCGCACTTCCAAAATCATAGCCATCAGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCCGCCTGAACATTGCATCGATGGTTTGATCAGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCGTTGGTGGCAGCGATTCATTGCTGACGTCCGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCAACAATTGAAGCGGTGGAAGCTATAGCCGCGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCACGTCGCCGCGAATTTTCCGCATTACCGTAGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCTCGACAATTGTGACACGGGTTTCAACGTCAGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCAACGGTGCTGCCAACTGGGTGCTCGCGCGCGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCTTGAGTTCTGATTGTTAGTTGTATCTTGGTGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCCTTCATCTAATGATGAATTAACTAACAAGTGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCAACGGTGCTGCCAACTGGGTGCTCGCGCGCGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCCTAACCACTGGACTGGCTGGAGGGGTCGCCGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCCATCGTACCCTCACAAAAGCTAACGCCGGCGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCCTTTTATGAAGAACTGTTTACACCGGTTATGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCTCTTCAAGGTCTTGTGTGGCAATAGCGTTTGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCTCAATATAACTCGCATCATAATCAAGATTAGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCAAGGTGAGCAAATCTTTGATGTTAGTCAGCGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCATCTCACTGATGTTATCGGCGATTTACGAGGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCGGGATTGTGGGCTGACGATAGATATACGCTGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCCTAACCTTGGCTGTGAATACTGGAGGCGTCGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCGTAAAACCATCATTCGTCTTGGAGTCAATCGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCCATATTGACGTTGTGAACGTTGCATTTCTGGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCCTTACGTCAACGGTTATACCGTGCGCAAGGGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCAAGGGTTAGCGCCACTTAATCCTGACAACTGTCTCAGGTAGATGTCGAATCAATCAGTTCAAAAGCAAAGGCTTACGTTCAGGCGATTGAATCCGGGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCACCCAGTTTCCTCGTTGCGCAGATGTTTGTGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCCCGAGAAGGTCGGACGATCAACTACTTTCGGTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGCAGGAAATTCGAGTTCTTCCCGCAATTGATGCTCTCAGGTAGATGCCGAATCAATCAGTTGAATTCC

>NZ_CP048003|3|1|1714638-1717247|PILER-CR
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	TACAACGAAGCCATTCGGAAATTAGCAGCG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	TTGCTCATATTGGAATCAATGTCTTTCGCG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CAGTAGCAACATAAACCCTAGTACCAATAA
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CAACCTTACAGAAGTTCTTCAAGAGCGGTT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	GGACGAGCAAATCTAACCGCTTCGGGCCAA
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CCGAAGGATAAGCCAATATTTGTACCAGAC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	GACTTCGAATGCTGAAGAACTAGCTGATCA
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	GGGGCACCTCGATATACGGGTACCCCATCT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CGAATTTAAGACGATGAAACTGCCGTATGG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	AGAGTTTATTCAGCATGATAGTACCAAATT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	TCAAATAGCCTCTTCGAAAGTTAAAGGAGG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	AGCGTGGCGTAGCGCTAACTTGTCATTTTT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	AAAAATTGGGGATTGGCAAGATTACGACTG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	TATTTCGCACTTCCAAAATCATAGCCATCA
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CGCCTGAACATTGCATCGATGGTTTGATCA
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	GTTGGTGGCAGCGATTCATTGCTGACGTCC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	AACAATTGAAGCGGTGGAAGCTATAGCCGC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	ACGTCGCCGCGAATTTTCCGCATTACCGTA
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	TCGACAATTGTGACACGGGTTTCAACGTCA
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	AACGGTGCTGCCAACTGGGTGCTCGCGCGC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	TTGAGTTCTGATTGTTAGTTGTATCTTGGT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CTTCATCTAATGATGAATTAACTAACAAGT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	AACGGTGCTGCCAACTGGGTGCTCGCGCGC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CTAACCACTGGACTGGCTGGAGGGGTCGCC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CATCGTACCCTCACAAAAGCTAACGCCGGC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CTTTTATGAAGAACTGTTTACACCGGTTAT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	TCTTCAAGGTCTTGTGTGGCAATAGCGTTT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	TCAATATAACTCGCATCATAATCAAGATTA
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	AAGGTGAGCAAATCTTTGATGTTAGTCAGC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	ATCTCACTGATGTTATCGGCGATTTACGAG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	GGGATTGTGGGCTGACGATAGATATACGCT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CTAACCTTGGCTGTGAATACTGGAGGCGTC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	GTAAAACCATCATTCGTCTTGGAGTCAATC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CATATTGACGTTGTGAACGTTGCATTTCTG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CTTACGTCAACGGTTATACCGTGCGCAAGG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	AAGGGTTAGCGCCACTTAATCCTGACAACT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAAAGC	AAAGGCTTACGTTCAGGCGATTGAATCCGG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	ACCCAGTTTCCTCGTTGCGCAGATGTTTGT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CCGAGAAGGTCGGACGATCAACTACTTTCG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC

>NZ_CP048003|3|3|1714638-1717313|CRISPRCasFinder
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	TACAACGAAGCCATTCGGAAATTAGCAGCG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	TTGCTCATATTGGAATCAATGTCTTTCGCG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CAGTAGCAACATAAACCCTAGTACCAATAA
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CAACCTTACAGAAGTTCTTCAAGAGCGGTT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	GGACGAGCAAATCTAACCGCTTCGGGCCAA
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CCGAAGGATAAGCCAATATTTGTACCAGAC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	GACTTCGAATGCTGAAGAACTAGCTGATCA
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	GGGGCACCTCGATATACGGGTACCCCATCT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CGAATTTAAGACGATGAAACTGCCGTATGG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	AGAGTTTATTCAGCATGATAGTACCAAATT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	TCAAATAGCCTCTTCGAAAGTTAAAGGAGG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	AGCGTGGCGTAGCGCTAACTTGTCATTTTT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	AAAAATTGGGGATTGGCAAGATTACGACTG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	TATTTCGCACTTCCAAAATCATAGCCATCA
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CGCCTGAACATTGCATCGATGGTTTGATCA
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	GTTGGTGGCAGCGATTCATTGCTGACGTCC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	AACAATTGAAGCGGTGGAAGCTATAGCCGC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	ACGTCGCCGCGAATTTTCCGCATTACCGTA
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	TCGACAATTGTGACACGGGTTTCAACGTCA
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	AACGGTGCTGCCAACTGGGTGCTCGCGCGC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	TTGAGTTCTGATTGTTAGTTGTATCTTGGT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CTTCATCTAATGATGAATTAACTAACAAGT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	AACGGTGCTGCCAACTGGGTGCTCGCGCGC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CTAACCACTGGACTGGCTGGAGGGGTCGCC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CATCGTACCCTCACAAAAGCTAACGCCGGC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CTTTTATGAAGAACTGTTTACACCGGTTAT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	TCTTCAAGGTCTTGTGTGGCAATAGCGTTT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	TCAATATAACTCGCATCATAATCAAGATTA
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	AAGGTGAGCAAATCTTTGATGTTAGTCAGC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	ATCTCACTGATGTTATCGGCGATTTACGAG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	GGGATTGTGGGCTGACGATAGATATACGCT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CTAACCTTGGCTGTGAATACTGGAGGCGTC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	GTAAAACCATCATTCGTCTTGGAGTCAATC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CATATTGACGTTGTGAACGTTGCATTTCTG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CTTACGTCAACGGTTATACCGTGCGCAAGG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	AAGGGTTAGCGCCACTTAATCCTGACAACT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAAAGC	AAAGGCTTACGTTCAGGCGATTGAATCCGG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	ACCCAGTTTCCTCGTTGCGCAGATGTTTGT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CCGAGAAGGTCGGACGATCAACTACTTTCG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	AGGAAATTCGAGTTCTTCCCGCAATTGATG
CTCTCAGGTAGATGCCGAATCAATCAGTTGAATTCC

>NZ_CP048003|3|1|1714638-1717313|CRT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	TACAACGAAGCCATTCGGAAATTAGCAGCG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	TTGCTCATATTGGAATCAATGTCTTTCGCG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CAGTAGCAACATAAACCCTAGTACCAATAA
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CAACCTTACAGAAGTTCTTCAAGAGCGGTT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	GGACGAGCAAATCTAACCGCTTCGGGCCAA
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CCGAAGGATAAGCCAATATTTGTACCAGAC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	GACTTCGAATGCTGAAGAACTAGCTGATCA
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	GGGGCACCTCGATATACGGGTACCCCATCT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CGAATTTAAGACGATGAAACTGCCGTATGG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	AGAGTTTATTCAGCATGATAGTACCAAATT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	TCAAATAGCCTCTTCGAAAGTTAAAGGAGG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	AGCGTGGCGTAGCGCTAACTTGTCATTTTT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	AAAAATTGGGGATTGGCAAGATTACGACTG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	TATTTCGCACTTCCAAAATCATAGCCATCA
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CGCCTGAACATTGCATCGATGGTTTGATCA
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	GTTGGTGGCAGCGATTCATTGCTGACGTCC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	AACAATTGAAGCGGTGGAAGCTATAGCCGC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	ACGTCGCCGCGAATTTTCCGCATTACCGTA
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	TCGACAATTGTGACACGGGTTTCAACGTCA
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	AACGGTGCTGCCAACTGGGTGCTCGCGCGC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	TTGAGTTCTGATTGTTAGTTGTATCTTGGT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CTTCATCTAATGATGAATTAACTAACAAGT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	AACGGTGCTGCCAACTGGGTGCTCGCGCGC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CTAACCACTGGACTGGCTGGAGGGGTCGCC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CATCGTACCCTCACAAAAGCTAACGCCGGC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CTTTTATGAAGAACTGTTTACACCGGTTAT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	TCTTCAAGGTCTTGTGTGGCAATAGCGTTT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	TCAATATAACTCGCATCATAATCAAGATTA
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	AAGGTGAGCAAATCTTTGATGTTAGTCAGC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	ATCTCACTGATGTTATCGGCGATTTACGAG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	GGGATTGTGGGCTGACGATAGATATACGCT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CTAACCTTGGCTGTGAATACTGGAGGCGTC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	GTAAAACCATCATTCGTCTTGGAGTCAATC
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CATATTGACGTTGTGAACGTTGCATTTCTG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CTTACGTCAACGGTTATACCGTGCGCAAGG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	AAGGGTTAGCGCCACTTAATCCTGACAACT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAAAGC	AAAGGCTTACGTTCAGGCGATTGAATCCGG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	ACCCAGTTTCCTCGTTGCGCAGATGTTTGT
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	CCGAGAAGGTCGGACGATCAACTACTTTCG
GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC	AGGAAATTCGAGTTCTTCCCGCAATTGATG
CTCTCAGGTAGATGCCGAATCAATCAGTTGAATTCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048003.1\|WP_003584830.1\|1700841_1701855_+\|cytochrome-d-ubiquinol-oxidase-subunit-II	unknown	unknown	gnl\|CDD\|376764
NZ_CP048003.1\|WP_016381600.1\|1719467_1721159_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|227321
NZ_CP048003.1\|WP_003584827.1\|1707530_1708325_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048003.1\|WP_003586311.1\|1712750_1713656_+\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|274694
NZ_CP048003.1\|WP_003566940.1\|1705765_1706140_-\|YxeA-family-protein	unknown	unknown	gnl\|CDD\|377665
NZ_CP048003.1\|WP_003571227.1\|1701851_1703594_+\|thiol-reductant-ABC-exporter-subunit-CydD	unknown	unknown	gnl\|CDD\|227321
NZ_CP048003.1\|WP_003580474.1\|1727817_1728384_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP048003.1\|WP_003586314.1\|1713633_1713939_+\|CRISPR-associated-endonuclease-Cas2	cas2	mkCas0206_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|226043
NZ_CP048003.1\|WP_003580481.1\|1721155_1722787_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP048003.1\|WP_003580472.1\|1728674_1730093_+\|multidrug-efflux-MFS-transporter	unknown	unknown	gnl\|CDD\|129794
NZ_CP048003.1\|WP_003580477.1\|1724233_1726072_+\|PTS-transporter-subunit-EIIC	unknown	unknown	gnl\|CDD\|273919
NZ_CP048003.1\|WP_016382231.1\|1717593_1718694_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048003.1\|WP_003580488.1\|1718845_1719271_+\|NusG-domain-II-containing-protein	unknown	unknown	gnl\|CDD\|227646
NZ_CP048003.1\|WP_003571221.1\|1706363_1707530_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048003.1\|WP_003580476.1\|1726242_1727691_+\|family-1-glycosylhydrolase	unknown	unknown	gnl\|CDD\|236580
NZ_CP048003.1\|WP_003584829.1\|1703574_1705302_+\|thiol-reductant-ABC-exporter-subunit-CydC	unknown	unknown	gnl\|CDD\|227320
NZ_CP048003.1\|WP_003566944.1\|1705373_1705697_-\|DUF4870-domain-containing-protein	unknown	unknown	unknown
NZ_CP048003.1\|WP_076665408.1\|1728389_1728539_+\|acetyltransferase	unknown	unknown	unknown
NZ_CP048003.1\|WP_003580480.1\|1722924_1723782_+\|PRD-domain-containing-protein	unknown	unknown	gnl\|CDD\|170086
NZ_CP048003.1\|WP_003586316.1\|1713935_1714613_+\|type-II-A-CRISPR-associated-protein-Csn2	csn2	cd12218_csn2_CAS-II-A	gnl\|CDD\|213411

Protein	Function_ID	Function_description	E-value
NZ_CP048003.1\|WP_003584830.1\|1700841_1701855_+\|cytochrome-d-ubiquinol-oxidase-subunit-II	gnl\|CDD\|376764	pfam02322, Cyt_bd_oxida_II, Cytochrome bd terminal oxidase subunit II. This family consists of cytochrome bd type terminal oxidases that catalyze quinol-dependent, Na+-independent oxygen uptake. Members of this family are integral membrane proteins and contain a protohaem IX centre B558. One member of the family, Klebsiella pneumoniae CydB, is implicated in having an important role in micro-aerobic nitrogen fixation in the enteric bacterium Klebsiella pneumoniae. The family forms an integral functional unit with subunit I, family Bac_Ubq_Cox, pfam01654.	7.22643e-91
NZ_CP048003.1\|WP_016381600.1\|1719467_1721159_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|227321	COG4988, CydD, ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones].	6.00819e-92
NZ_CP048003.1\|WP_003586311.1\|1712750_1713656_+\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	8.31092e-89
NZ_CP048003.1\|WP_003566940.1\|1705765_1706140_-\|YxeA-family-protein	gnl\|CDD\|377665	pfam06486, DUF1093, Protein of unknown function (DUF1093). This family consists of several hypothetical bacterial proteins of unknown function.	3.24145e-19
NZ_CP048003.1\|WP_003571227.1\|1701851_1703594_+\|thiol-reductant-ABC-exporter-subunit-CydD	gnl\|CDD\|227321	COG4988, CydD, ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones].	0
NZ_CP048003.1\|WP_003580474.1\|1727817_1728384_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	3.1683e-11
NZ_CP048003.1\|WP_003586314.1\|1713633_1713939_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	1.69699e-23
NZ_CP048003.1\|WP_003580481.1\|1721155_1722787_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	7.32284e-92
NZ_CP048003.1\|WP_003580472.1\|1728674_1730093_+\|multidrug-efflux-MFS-transporter	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	5.79055e-65
NZ_CP048003.1\|WP_003580477.1\|1724233_1726072_+\|PTS-transporter-subunit-EIIC	gnl\|CDD\|273919	TIGR01995, beta-glucosides_PTS_EIIBCA, PTS system, beta-glucoside-specific IIABC component. This model represents a family of PTS enzyme II proteins in which all three domains are found in the same polypeptide chain and which appear to have a broad specificity for beta-glucosides including salicin (beta-D-glucose-1-salicylate) and arbutin (Hydroquinone-O-beta-D-glucopyranoside). These are distinct from the closely related sucrose-specific and trehalose-specific PTS transporters.	0
NZ_CP048003.1\|WP_003580488.1\|1718845_1719271_+\|NusG-domain-II-containing-protein	gnl\|CDD\|227646	COG5341, COG5341, Uncharacterized protein conserved in bacteria [Function unknown].	3.3644e-34
NZ_CP048003.1\|WP_003580476.1\|1726242_1727691_+\|family-1-glycosylhydrolase	gnl\|CDD\|236580	PRK09593, arb, 6-phospho-beta-glucosidase; Reviewed.	0
NZ_CP048003.1\|WP_003584829.1\|1703574_1705302_+\|thiol-reductant-ABC-exporter-subunit-CydC	gnl\|CDD\|227320	COG4987, CydC, ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones].	4.4558e-158
NZ_CP048003.1\|WP_003580480.1\|1722924_1723782_+\|PRD-domain-containing-protein	gnl\|CDD\|170086	PRK09772, PRK09772, transcriptional antiterminator BglG; Provisional.	1.02475e-34
NZ_CP048003.1\|WP_003586316.1\|1713935_1714613_+\|type-II-A-CRISPR-associated-protein-Csn2	gnl\|CDD\|213411	cd12218, Csn2, CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	1.15445e-80

>NZ_CP048003.1|WP_003586316.1|1713935_1714613_+|type-II-A-CRISPR-associated-protein-Csn2
MNLAYYPFQLITTKPSEVTVIDTASPKVLTDLIEALRNDLDKVVLSNDQLEPQEIRKASLWIGDPMLELDLDKLFQRLIYKRMELLIENQRLVELIDQSQQMAMYLLQDPFLSDLPVTVEPGGKLEQIMKYCNVHFDEAVTTESISKIEALIQTLTKLEEKKLVILTNVSHYLSARDFFAVTEQIGDTELQVILIEFSKVNRKKYFEKCQYIYIDEDFVDSRELD
>NZ_CP048003.1|WP_003586314.1|1713633_1713939_+|CRISPR-associated-endonuclease-Cas2
MRLMIMFDLPVLTSENRRNYRKFRKALINEGFLMMQYSIYVRVCSTKKSAEFLEHRIAAMKPPIGTVQTLMVTEAQYQAMHFLVGEAKQDIRNSADRTVII
>NZ_CP048003.1|WP_003586311.1|1712750_1713656_+|type-II-CRISPR-associated-endonuclease-Cas1
MGWRSLIVTQHCKVTTKNRTLVVQTDGEVNNVPIEDINQVVFTTTRALLSADAITTLAEANAKVIFSGRDGQPVTETTNLYSDRRKADLVRLQVNWPKSLVENLWTKIVAAKVSNQAQVTKLCGYDNQSLLDDLDTLEINDHSNREATAARKYFKLIFGDDFSRSDICATNAALNYGYSILLSTTNRAIVSAGHITEIGMHHSSVANQYNLGSDLMEPFRPAIDYWVANQKFTDLTPNIKYGLIALLNLEVTFNGKKALLQNALDEHVENCLAYLDGKRNNCRIEVEFPNEVSSDAFNDHV
>NZ_CP048003.1|WP_003584827.1|1707530_1708325_+|hypothetical-protein
MEATKLAKRKQWPVPFSQTEPHFTFNNWLKFFSVVLFAYLLFYTRNPIGGFFNMSGTTFLNVANGWTRAVVVFGGVLYCAIIFAGAVWAAGWDGLSQLFASFRWRDIWYVFAYGILYLIATTLGGILGDLVPIRFGVDFVNTLEAAQFGNLGAFSLISFRAFFMTLATQLTAVMIFLASQQLFSRLATKHRRWALFLTYLLALTVTAVVTTTPLAPHVFVNIASGLIAQLPLYWVYRRSRNILVVTLSAFILMHVMIGLAVMLG
>NZ_CP048003.1|WP_003571221.1|1706363_1707530_+|hypothetical-protein
MSRQNLMILIVDLVLIIIFIGGFGWGIGTVKRYQVEPNTSRTETNTDSLYSESRFEKTLQKFKRLDLMVRLGPVKDAKTFNYTPDEFNVKYSSQPIVSGLKATKTLNAETGEVEVCTTMTPQGVTVAGDYLLTTAYDHDGFHNSVMYIQDLKTGKLLNTVVLNGRPHVGGLTYDAKNDNIWICGRRNNAAEVFAIKLKTALTYNVDKKAKAVAYSQRAQLGNISRASFVTYYENALFVGFFNPTGKGNIQRYPLNDKGQVVGKSLTSSISNQFDVLTQSVLHQDILSKIQGMAFYGDYTILSQSYGGGNSTLYIFKTDPKKTIFRASDAIDTFDMPSHLEQISTHDGRMYMMFESAAYAYRHRSTNQLDRVLSMNLEGFVQLVLKEEK
>NZ_CP048003.1|WP_003566940.1|1705765_1706140_-|YxeA-family-protein
MNMKKILIGIGIFIGLVILGGAGFYAWYTQSTPYYTQITTTGKKFDVIDDETGAARDIDYAYTQMAYDEKGHGTEVDFNGHKSRPLKMQAYLRLDYSTRRNQVISWEAVPKEKVPKAALAKLNR
>NZ_CP048003.1|WP_003566944.1|1705373_1705697_-|DUF4870-domain-containing-protein
MTNEHKVLRGLSYISVIFAPILFPILVWIFTPQGSVTRDTAKHALWLHIIPTLLSIFIFMIIGGVGFFTNSINATSAVSLILLLVAMVVDIGMVVYNIYTGIKIITS
>NZ_CP048003.1|WP_003584829.1|1703574_1705302_+|thiol-reductant-ABC-exporter-subunit-CydC
MHWLKNEHWVRPDLKRYRGLLFWSLILGVMTFVFAGALMFTSGFLIDKSATKPLFAAIYVTVVLTRAFGIGRPVFQYIERLTSHNWVLRITSHMRRKLYKVLETDAAFVSEHHQTGDILGLLADDIGHIQNLYLRMIFPTVVGAGLTVIATLLLGWFNWGCALWIMLLLLFQVLILPWWGLVVERFRKAEQKQLNHDAYVSLTDSVLGLSDWVITHREKDFMSQSLAAPKKLAASTVKSKRFQWRRDFVGQLLFVLIVISMLIWTNLEWTGNQASANWVGAFVLVVFPLDQAFSGIAQGVGEWPTYRDAIRHLNDLQPVTRQLPQQQAVPTQFKEMTLQHLSFQYTPKDPELITDIDLTVHSGEKIAILGPSGMGKTTLLQLVLGDLTPTTGNVLVDGQDVLTYQQHRTNLFAVLDQSPFLFNTSIVNNVRLGNEQASDADVAAALKAVKLDQLVAQLPNGINSSVEEAGFGFSGGERQRLSLARILLQDAPIVLLDEPTVGLDPITEQALLETMFTVLQGKTILWVTHHLQGVNQTDRVIFLEDGRLTMNDTPSHLAKNDERYQNLYALDAGLR
>NZ_CP048003.1|WP_003571227.1|1701851_1703594_+|thiol-reductant-ABC-exporter-subunit-CydD
MIDKTLMRLSGMKRIMTMLAGFALVQAFVILLQGKFLAEGIVHSWNRQSLAGLWLPLGLFATAFVIRQLIVWVRNRIGARFAMTSSAWLQAQLLKHLYALGPAAVAKEGTGNLVTMALDGIPEAENYIELILNKILNMSIIPWVLVAYIWYENWLTGFTLLIMFPIIILFMVILGLAAQDKSESQYAGFQKMSNHFIDSLRGLKTLQLMGISRQYANNVYDVSEDYRKQTMGVLRIAMLSTFALDFFTTLSIAVVAVFLGIKLMDGAIPLYPAMVALILAPEYFMPIRDFGTDYHATLNGKNAMKAIWQVIDQPLPTDTNVLPAFSRWQAQDTVTINHLDFTYPNERAGIQDANLQFTGTEKVAIIGASGSGKSTLLNLIGGFLQPQKAAMTVRGTKVPHMTQAAWQDHLSYIPQDPYLFADTIAANIRFYRPDASDEDVKQAAEAAGLSHWIETLADGYATRIGEGGRGISGGQAQRIALARTLIDTNRSIWLFDEPTAHLDIETEAELKETLVPLFKNRLVIFATHRLHWLNQMDRVIVVDGGKIIAEGTPSELAAHSKPYQALVHEMRGEFNALVEK
>NZ_CP048003.1|WP_003584830.1|1700841_1701855_+|cytochrome-d-ubiquinol-oxidase-subunit-II
MSWLQILWFFLLFVLFSGFFVLEGFDFGVGMSTKLLARNSDEEDQLVATIGPHWDGNEVWLITAGGAMFASYPMWYASLFSGFYIMFFLVLFGLIVRGVSFEFAAHAETKRGRNIWRWALACGSLIPPFILGMIFTAIIQPLPITKAGDVYPTLGNQINLLTIVGGVAVTLMMLMHGLNFIRLKTTGDLRKRARDWNSKLYYLLYAGEIVFAVLLFFMTDFFKERPISTLLILVVIVGSTVAAHVGVLKDNEVLSFVGSALGLVGVVGVIFNGLFPRVMIGQDAAMSILVKDASASPLTLTIMTIVAVILLPIALAYFIWSYVVFHKRIQAKGAVSE
>NZ_CP048003.1|WP_016382231.1|1717593_1718694_+|hypothetical-protein
MKKLIVLSATLLVSMGLAACSSGSSSSSSKSSSTTSQTSNAKVKINTGADASAKVPAAGTLVMRQLYAAPHGKQSFAAVNVTLNGDTIVSAKIDEFQYVKKSSDWTGVPNSNKDFGKSYPKGQFLIAKAENSNPYSALMKKEAKATHTWEENETAITNFVKGKKIEDLKADVAKVKDTKKVSDVVSGATFADTAGYLQAIYDAATTGMVAEGIQTTDNTITEGQVLAAPHGTQSFGIVTVAMQGDKIANVFLDEFQYMPSKDFGGVPNSNADFGKGIKSGTVLASKRANSEAYSAIMKSKGKATQTWQENSNAIDEFAKGKTIAELETAVSDLKGKKKVSDVVSGATFTDTSGYLTAIISAAKAAK
>NZ_CP048003.1|WP_003580488.1|1718845_1719271_+|NusG-domain-II-containing-protein
MRWLKKYVRPFDYVIIIVLFVACFLPVGIFSLTEANVNTNQKVAVISINGHVKRRIQLTTHTRHQQFTLYPAKGQYNIIEVQGARIRDKEDNSPDQIAVHTGWISQIGQQSICLPHKLLIEIKPAQAGTGTSGDTGGLVHP
>NZ_CP048003.1|WP_016381600.1|1719467_1721159_+|ATP-binding-cassette-domain-containing-protein
MLGLLKYGRDQRWAGVIETVFDWLPTLLPIMIALNFAAKRPGNALIITVILVLIWLGYVIGYERHHRHAWAMSAKRELRDHYFEALYQRNNAGDATAADNAVIQRDLGGLNNLDMFYSTLFPTLIQAGLTFLLLIGLSVWYGSWLAFLPLACVFLIGFAMMFLGKKMSAQNKAHLAGFLRMGGRFMNDLSGMNTLVMYNAADRYAKKFADDSEYFRQATMNLLRTQLQVLFVINGFVYLTVFAGGFVTALQLAAGQLPAAGAFATWFALAMMMVNARQLGYFFHVVKSNGPALAGILATIAKSKTTPATVKITDNRPLKQLVLQDVAIGYEADAPLVSDINATLVPGMLYGLAGENGTGKSTLTQALLGQLTPLSGTIMADNTPVTALSNAQRAAVFGYVAANDYIFSGTIKENLLLGNQFGDQWQQHLDELGLMHFVTDLQDGYATEVGEGGRLLSPGQRQQLAFARMLLADKTVYLLDEMTSSIDAANAAIILAAIKRLSRQKIVLFISHDLSAMAEADVVWFIHDHQLISADHAQLYRDQPAYRHLVDNPEAMLKEGQPS
>NZ_CP048003.1|WP_003580481.1|1721155_1722787_+|ABC-transporter-ATP-binding-protein
MIRSLLRYTHHLTGAIIISFLIGLVAELTKVVVLVLAAMMLFDPQNASHLLIPGIIAVVIVGLGSFGEQYAGHFVAFHVLAELRGAVYRKLVQLAPAKLDSQGSGKLLKLIGSDIEAMEIFYAHTIVPVAIGLIYGVLMVAVYSSLNGPAAAVVLVSYAAVGLLIPYYRHEQMTAKAQAADRQKAVNQQYLLESVRGMAVLRQLEVADARMKTGNEGFDHEATAFQQSQFGQLLKNMSATLVMLVAWLFIVWLSGWTQPQPLQQALLAVFPLTFGPLLALTNLPASLLNGFAAARNLLNLLQEVPATSAAIDATRTLNQIAIIQVDHVTFKYPSRDETVLRQVSLSLHAGEIVGFVGASGSGKSTLAKLIMGWYPLTQGRILIDGIDLTKIDPASLRAQVNYLPQTPVFFSESVRDNLTLHDATITDAQIWTVLNQVKLTSRLRQAEKGLDENVVSGQLQFSSGEQQRLELARALLHPSSVLVLDEPTSNLDTENERLILDAIKAYYHGIVIMISHRAESAAYADRLYRFADHQVSAASTEPK
>NZ_CP048003.1|WP_003580480.1|1722924_1723782_+|PRD-domain-containing-protein
MIIQNVLNNNAVVARHQQREVIVVERGIGFRAKKDAKMALRDSMKVYVPEDQAKLKIATATIASLPSAYLDLAAGIIQEAEKRLQTTFKSYLLIELADHVHFAVQRLYEKIVLHNKLLWEIQVAYTQEYEMGEWALHQIAAQLHEQLPEDEAGFIALKFVSNDLNHQQTVNSLAFTQTLASLTKIIFYNLGLDMNVKTPDYQRLVIHLKFFLQRMYAAAPSPLSLKMENYDYVLLKHLQQDYARAYHCMEDVDRFMQQKLAIAIPKNEQIYLTMHIARLAKSLAE
>NZ_CP048003.1|WP_003580477.1|1724233_1726072_+|PTS-transporter-subunit-EIIC
MNESGLAQQLLNLIGGKQNINQVWHCATRLRFTLKDRAKVPKDKIEALDGVITVVEASGQFQVVIGNNVGDVYHEVVKLEPSLSEGETSGETAAQGKMTFKSAFNSLLTFISGVFTPFLGAMAGAGILKGLLSLAVVMGWLTAKSGAYQIWWAAADGIFYFLPIALAFTAAKQLKVNQFVSMAIAAAMVSPGIVALGAKATTIDFFGIPVVPANYTATVLPILLVVVVQKFLEPVFNKLWHESVRNILAPVCLLVVIVPLTLIVVGPISATVSSWLATAIVSLNKSVPILAGLVLGGFWQVIVIFGVHWALVPVMMNNIAQNGTDLMMPILLPAVLSQAGAALAVFLRTRDAKMKSLAGSSTITALFGITEPTIYGITLKLKKPFYLACVAGAVGGMIVAISGAGANAAALASVLSLPTFIGKGFGLSVVGDVVAFALGTVLTYFFGGINAGAKAKTSPSANSELGEALAAPVKGVLVPLTGLADEVFASETMGKGVAIVPENGMVKAPVAGVIRLLYPTGHAIGIQSDKGSEILIHIGIDTVNLKGKHFQPLVAQGQHVEIGTPLVQFDHEAIEKEGYESTVMMIVTNSDQYQIATLGQGATDDRPVMTLA
>NZ_CP048003.1|WP_003580476.1|1726242_1727691_+|family-1-glycosylhydrolase
MTYLNFPKNFLWGGATAANQLEGAYQEDGKGLSIADVLPQGKDRFTIVNRPDFNWTIDKSKYRYPNHQGIDHYHRFKEDIKLFSEMGFKCYRFSIAWSRIFPEGDEKTPNASGLKFYDEVIATCLKYDIEPVVTISHYEMPLHLVTKYGGWKNKRLIEFYKHFAETVLTRYFKQVKYWMTFNEINSAWAFPVMSQGLVANNGGNDKQTIFQAWHNQFVASAWAVKIGHALDPKLQVGCMLLYATTYSYDANPVNQLATLQQNQAFNFFCGDVQVRGEYPAYTDALMADNGFKFTDLDFSAEELTLLKNHPVDYIGFSYYMSAVVETVEKEHAEVGGNLLSGIKNPFLRASEWGWQIDPIGLRIALNQLYERYRKPLFIVENGLGAVDKPDADGKIKDDYRIDYLKQHIEQMGAAIHDGVDLMGYTPWGCIDLVSASSGQMSKRYGFIYVDLDDAGQGSLNRYKKQSFNWYQRVIASNGTDLG
>NZ_CP048003.1|WP_003580474.1|1727817_1728384_+|TetR/AcrR-family-transcriptional-regulator
MDTREKLVATAASLFQKEGVRATGLTQILTVSGTPKGSLYYYFPNGKAQLIEAAITYAGQHILEHVQRDLDRYKAPDAALAGQLESMATEMQEKGHLGGNSISLIALETGDDPELQAACSAVFTQLETLYIKKLTSAGIPPDRAQPLGQFIQASIEGAIILAATKDNPDLLRQTADQLTRLIKLALAA
>NZ_CP048003.1|WP_076665408.1|1728389_1728539_+|acetyltransferase
MPVVCFYHLTRSPAQQPACKDLGRNGQSTTITPKATYTPVANRAGSRSL
>NZ_CP048003.1|WP_003580472.1|1728674_1730093_+|multidrug-efflux-MFS-transporter
MQLSQTKEMPQARVHVAHPAMAMIGLMIGAFVGMFSETSLNIALPSLMTALNVSQGTIQWLVTGYMLVIGICMPLSSLLSKWYNTKKIILFALGAFILGSVVSAMGAVFPVVLIGRLIQGIGTGLILPLMFSVAMQIFPPYKLGTVMGMAALVIMFAPAIGPTITGLVLAKFTWHYIFWLFVPFLVLAFIFTLTSMENVYHQTQTPVDWLSIVESSIGFAGIVVGTTMASDAGWLSLEVGLALLVGVIGLVLYARRQLSLTNPMLNLRVFANKQFTVGTLLVMLDFGVILASMYLLPMYLQRVMGLPVAMTGLVMLPGGIVNAAVSAIAGRMYDSHGAKWLSRGGFVIAILGVLILLNSGAQSPLWWIILGHVVLMIGAPLAMSPAQTYGLNSLSGAESADGSALLNTLQQIVGAVSTAVATSMLALGSAKAAGQTGLTIGSHFGFMFVLILAIIGLIVAFQVKKPQASRDL

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Crispr_ID: NZ_CP048003_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048003_4

2066222-2066339

Orphan

Consensus_repeat	Method
GCTGGCCCAGAAACCTACACATAAGGACC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP048003_4

>merge|NZ_CP048003|4|2066222-2066339|CRISPRCasFinder
GCTGGCCCAGAAACCTACACATAAGGACCGCGGCCACTTTATGCTCCGGTTTCTACCCGGTCCAGCTCACGCTCCTCATAAACGCGTTTGCTGGCCCAGAAACCTACACATAAGGACC

>NZ_CP048003|4|4|2066222-2066339|CRISPRCasFinder
GCTGGCCCAGAAACCTACACATAAGGACC	GCGGCCACTTTATGCTCCGGTTTCTACCCGGTCCAGCTCACGCTCCTCATAAACGCGTTT
GCTGGCCCAGAAACCTACACATAAGGACC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048003.1\|WP_003579808.1\|2054364_2056476_+\|ferrous-iron-transport-protein-B	unknown	unknown	gnl\|CDD\|223447
NZ_CP048003.1\|WP_003579778.1\|2075898_2077092_+\|serine-hydrolase	unknown	unknown	gnl\|CDD\|365903
NZ_CP048003.1\|WP_003566823.1\|2056511_2056679_+\|FeoB-associated-Cys-rich-membrane-protein	unknown	unknown	unknown
NZ_CP048003.1\|WP_003579806.1\|2056893_2058561_+\|phosphoenolpyruvate-carboxykinase-(ATP)	unknown	unknown	gnl\|CDD\|236471
NZ_CP048003.1\|WP_003566828.1\|2062381_2062804_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048003.1\|WP_003566829.1\|2062943_2063318_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048003.1\|WP_003579780.1\|2072114_2073260_+\|N-acetylglucosamine-6-phosphate-deacetylase	unknown	unknown	gnl\|CDD\|238434
NZ_CP048003.1\|WP_003579797.1\|2066537_2068004_+\|peptide-MFS-transporter	unknown	unknown	gnl\|CDD\|225646
NZ_CP048003.1\|WP_003579810.1\|2053886_2054378_+\|ferrous-iron-transport-protein-A	unknown	unknown	gnl\|CDD\|224830
NZ_CP048003.1\|WP_003566825.1\|2058731_2059049_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|131249
NZ_CP048003.1\|WP_003566083.1\|2077094_2077922_+\|ammonia-dependent-NAD(+)-synthetase	unknown	unknown	gnl\|CDD\|234831
NZ_CP048003.1\|WP_003579799.1\|2063743_2066062_+\|ABC-transporter-ATP-binding-protein/permease	unknown	unknown	gnl\|CDD\|213222
NZ_CP048003.1\|WP_003566099.1\|2073284_2073986_+\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225099
NZ_CP048003.1\|WP_003660548.1\|2074428_2075895_+\|nicotinate-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|236426
NZ_CP048003.1\|WP_003579793.1\|2069221_2071198_+\|S9-family-peptidase	unknown	unknown	gnl\|CDD\|224423
NZ_CP048003.1\|WP_050569249.1\|2060388_2061759_-\|melibiose-symporter	unknown	unknown	gnl\|CDD\|340890
NZ_CP048003.1\|WP_003566103.1\|2071210_2072008_+\|pyrroline-5-carboxylate-reductase	unknown	unknown	gnl\|CDD\|223422
NZ_CP048003.1\|WP_003579803.1\|2059157_2060294_-\|alpha-L-fucosidase	unknown	unknown	gnl\|CDD\|376461
NZ_CP048003.1\|WP_003579795.1\|2068065_2068893_+\|phosphoesterase	unknown	unknown	gnl\|CDD\|163441
NZ_CP048003.1\|WP_016380531.1\|2074121_2074340_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP048003.1\|WP_003579808.1\|2054364_2056476_+\|ferrous-iron-transport-protein-B	gnl\|CDD\|223447	COG0370, FeoB, Fe2+ transport system protein B [Inorganic ion transport and metabolism].	0
NZ_CP048003.1\|WP_003579778.1\|2075898_2077092_+\|serine-hydrolase	gnl\|CDD\|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	7.06447e-42
NZ_CP048003.1\|WP_003579806.1\|2056893_2058561_+\|phosphoenolpyruvate-carboxykinase-(ATP)	gnl\|CDD\|236471	PRK09344, PRK09344, phosphoenolpyruvate carboxykinase.	6.53618e-06
NZ_CP048003.1\|WP_003660548.1\|2074428_2075895_+\|nicotinate-phosphoribosyltransferase	gnl\|CDD\|236426	PRK09243, PRK09243, nicotinate phosphoribosyltransferase; Validated.	0
NZ_CP048003.1\|WP_003579780.1\|2072114_2073260_+\|N-acetylglucosamine-6-phosphate-deacetylase	gnl\|CDD\|238434	cd00854, NagA, N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl group of N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to glucosamine 6-phosphate and acetate. This is the first committed step in the biosynthetic pathway to amino-sugar-nucleotides, which is needed for cell wall peptidoglycan and teichoic acid biosynthesis. Deacetylation of N-acetylglucosamine is also important in lipopolysaccharide synthesis and cell wall recycling.	5.10533e-157
NZ_CP048003.1\|WP_003579797.1\|2066537_2068004_+\|peptide-MFS-transporter	gnl\|CDD\|225646	COG3104, PTR2, Dipeptide/tripeptide permease [Amino acid transport and metabolism].	1.05047e-153
NZ_CP048003.1\|WP_003579810.1\|2053886_2054378_+\|ferrous-iron-transport-protein-A	gnl\|CDD\|224830	COG1918, FeoA, Fe2+ transport system protein A [Inorganic ion transport and metabolism].	1.38673e-15
NZ_CP048003.1\|WP_003566825.1\|2058731_2059049_+\|hypothetical-protein	gnl\|CDD\|131249	TIGR02194, Glutaredoxin-like_protein_NrdH, Glutaredoxin-like protein NrdH. NrdH-redoxin is a representative of a class of small redox proteins that contain a conserved CXXC motif and are characterized by a glutaredoxin-like amino acid sequence and thioredoxin-like activity profile. Unlike other the glutaredoxins to which it is most closely related, NrdH aparrently does not interact with glutathione/glutathione reductase, but rather with thioredoxin reductase to catalyze the reduction of ribonucleotide reductase.	6.08924e-12
NZ_CP048003.1\|WP_003566083.1\|2077094_2077922_+\|ammonia-dependent-NAD(+)-synthetase	gnl\|CDD\|234831	PRK00768, nadE, ammonia-dependent NAD(+) synthetase.	0
NZ_CP048003.1\|WP_003579799.1\|2063743_2066062_+\|ABC-transporter-ATP-binding-protein/permease	gnl\|CDD\|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	6.12386e-103
NZ_CP048003.1\|WP_003566099.1\|2073284_2073986_+\|GntR-family-transcriptional-regulator	gnl\|CDD\|225099	COG2188, PhnF, Transcriptional regulators [Transcription].	3.02871e-84
NZ_CP048003.1\|WP_003579793.1\|2069221_2071198_+\|S9-family-peptidase	gnl\|CDD\|224423	COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism].	3.36803e-97
NZ_CP048003.1\|WP_050569249.1\|2060388_2061759_-\|melibiose-symporter	gnl\|CDD\|340890	cd17332, MFS_MelB_like, Salmonella enterica Na+/melibiose symporter MelB and similar transporters of the Major Facilitator Superfamily. This family is composed of Salmonella enterica Na+/melibiose symporter MelB, Major Facilitator Superfamily domain-containing proteins, MFSD2 and MFSD12, and other sugar transporters. MelB catalyzes the electrogenic symport of galactosides with Na+, Li+ or H+. The MFSD2 subfamily is composed of two vertebrate members, MFSD2A and MFSD2B. MFSD2A is more commonly called sodium-dependent lysophosphatidylcholine symporter 1 (NLS1). It is an LPC symporter that plays an essential role for blood-brain barrier formation and function. Inactivating mutations in MFSD2A cause a lethal microcephaly syndrome. MFSD2B is a potential risk or protect factor in the prognosis of lung adenocarcinoma. MelB-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.70848e-43
NZ_CP048003.1\|WP_003566103.1\|2071210_2072008_+\|pyrroline-5-carboxylate-reductase	gnl\|CDD\|223422	COG0345, ProC, Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism].	8.5867e-80
NZ_CP048003.1\|WP_003579803.1\|2059157_2060294_-\|alpha-L-fucosidase	gnl\|CDD\|376461	pfam01120, Alpha_L_fucos, Alpha-L-fucosidase.	1.10349e-71
NZ_CP048003.1\|WP_003579795.1\|2068065_2068893_+\|phosphoesterase	gnl\|CDD\|163441	TIGR03729, acc_ester, putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.	7.77927e-119

>NZ_CP048003.1|WP_003579799.1|2063743_2066062_+|ABC-transporter-ATP-binding-protein/permease
MLDLKHIKKYYQTGDYTTKALDDVSVQFREQEFVAILGPSGSGKTTLLNVIGGLDRYDSGDLLLHGRSTKNFKEADWDAYRNNSVGFIFQSYNLIMHLSILENVELGLTLSGVSAADRRKKAEAALTKVGLKAHMGKQPNQLSGGQMQRVAIARAIVSEPSILLADEPTGALDTETSEEIMRLIADLSRERLVIMVTHNPQLAHEYAERTIEFKDGKILSDSRPFKDEEKTASFDLHRTKMSYFTALKLSFTNIMTKKGRTFLTAFASSIGIIGIAVVLALSSGFQKQIDNTQAETLAQFPITISTNATSLTAGAADNTKTSTFKTTSTVVAKQSASDKAQHTNKLNQKYIDYVNGISKKLTDNIGYTYGTGMNLLRDVNGTIKSVQFSTAKPSSNQTQRGLASASSSVYPVDREGGTSYLKKNYEVVAGSYPKHDGDVILIVDRDNSTNINALKNLGFDVKDGQKVKFNQIVGTKIKAISNNAYYQNVAGNVYVPTKDYANAYKQNDNRELTVAGVLRTRSKTSDGLLSQGFAYSDRLTKDLVALNKDSDVVKAQRASDVNIFTNQSVDKATKDQLITALGGSETPTQITIYPTSFKDKDKILSYLDKFNHGKKKADQVVYTDLAGTISSMTGGIMSAITIVLVAFAGISLVTSMIMIAILTYTSVLERTKEIGVLKALGARRKDITRVFDAETIILGVSSGILGIIIAWLLTFPINAILYSMTELPNVAQLNPIHAVILILISTILTVLGGHIPARMAANKDAAIALRAD
>NZ_CP048003.1|WP_003566829.1|2062943_2063318_+|hypothetical-protein
MAVWRMMFARPQFKHRQIKRMVDDLNREGNFGGMPIHRITLTRQTRELIYVDLEFQLTTGLTQPLFEQMAKYILVAVAGLAHAPQPIYLAAMANPFAKLNISYYIYPDHSLDLIYWQPLLREPT
>NZ_CP048003.1|WP_003566828.1|2062381_2062804_+|hypothetical-protein
MHTRCQEPNYVEVVNQNLERLLVFETVFKEYVHTCKNIEKGNCYASESLDHLRLYFTKNVMKFCTFVDSVDAEAAPCNYAAFHKVLVNGLRGIRGGVLNMLQAIGTDKVDHDRFAAGLAEQQAARAEIDTAFSKILDPIF
>NZ_CP048003.1|WP_050569249.1|2060388_2061759_-|melibiose-symporter
MGLMSTTAYYLYTAVLMMFITDYSGIYSGVPGKAAAVATTLLFVGRLWDAVNDLWTGYLIDISPRTRWGKFKPYVLIGSLLAGILGMMLFHIPQNFSNFGKEVYLYIVYFLFMFAATIIVTVPLTSTMSADQEVRAKLISWPRITSNIVGVVFAFFMAIATYLGTKRNPNIPLTVDLIVIPFLILSLIGIVMVKEGPVTEEAKPPRLRDIGQMIKINHPFRINLYFTFVGGFVWALLTATSLYYIKYAFGVKNLGTQSMYFGLLTLITLVAGTLISQKAMQYISAIRGVQWCYLAMAPFLVIMFIINEIHVIDNPWVFYLLIGIVMTIAGAQFVPANLIIMETMDYNRLKLNAGMEATINAVNMFLQKLQSGLATIGVGAALLIVGYNAQTLEKASHVPDNLLQSLGVVLFAIPAVFSFLAYLIARHYPLQGAARDEMYAALAAKRVTNTQSSKSK
>NZ_CP048003.1|WP_003579803.1|2059157_2060294_-|alpha-L-fucosidase
MTKPSAVNIHRTNPPDWFKQADFGIIIHWGPYSVPAYAPVNIPDYGTLIKTKSLGYLFEHQPYAEWYGNSMLLPNSPVAAYHRTHYGNTSYADFAKTFKQTAQNVDVQAWAEAFANAGAKYVVIVTKHHDGFVMFDPHTKNPYEPDYHLNFDFVGELAQAVRAHGMRFGTYYSSLLDWTFPHLPIKDYGSFLLGNDKSQTYKDYVWRQWHELIDRYHPDVLWSDIGYPDDHRLETLFKYYYQQVPEGLVNDRWQQFPDWMRTSWIRPIFNLVAAQVIKRDQHHSDDLSEVKYYDYRTLEYRTDWPQTNRYFEMTRGMDKSFGYNRLSRPEDYITADDIKQLIAELGSKRGRLLLNVGPDMNGQIPSAQLSILQQLSDR
>NZ_CP048003.1|WP_003566825.1|2058731_2059049_+|hypothetical-protein
MAIHFVIYEKPNCESCRLTKRWLAEHGQHFRTTNHRGESNLVDINANDPLKRAWSHQKIVKFREAGYDRFPVVRVRDDATGDVLATWSGFRPEALASWTAINQLG
>NZ_CP048003.1|WP_003579806.1|2056893_2058561_+|phosphoenolpyruvate-carboxykinase-(ATP)
MTSKQSFSSSDITSQSGYFSALKATVETAFYGENVKQVTTIAQAYALAKTAPGVIITDLPIKHTAELGLPPDAKVLVANDGRVVGRTAAARQIIGQPDVDETKLAAIAREAVFLGSRKTFLRGDVTVGLSSDFAIKAHLMLPEAYANNLYTYLLNFQIDTPQRNAEYEQSRPLPEDDIYLYADPDWHDPAYPNGVAVFDPTHNAAIVLGLRYFGELKKGTLTLAWATAHRNGFVACHGGMKQYTRQDGDFTMAAFGLSGSGKSTITLASHGDQYPVKVLHDDAFVIDRQTGATTALEPSYFDKTQDYPLSDPGIQYFLTVQNVGVTLDAAGKKTLVTQDIRNGNGRTVKSRYVTPNRVDHLTESIDAIFWIMKDDTLPPVVKLEDPDLAAAFGVTLATKRSTAENVIGDVDRDHLVIEPFANPFRSYPLGEDYQDFHQLFEQRQTACYILNTGSYNGQNVKPADTLGAIAKIVDETAAFKPFGLLPKMRYLPLSGFNVDFGDNDYRARLRQRLEDRLAFIATKDVDHDGYDRLPIDASRALEDVIAALDQQAAAM
>NZ_CP048003.1|WP_003566823.1|2056511_2056679_+|FeoB-associated-Cys-rich-membrane-protein
MATWIIGGIVVLIIAVVAYRTFFKKNKAGCSQCEEVGCPLIDHAKMVQANNRRKA
>NZ_CP048003.1|WP_003579808.1|2054364_2056476_+|ferrous-iron-transport-protein-B
MAIRETLALVGNPNSGKTTLFNALTGAKQHIGNWPGVTVERKSGRLKADNALVIQDLPGTYSLSPYSSEEIVTRDFLLNDQPDLVLNVVDATNLERNLYLTLQVMETGRPLIVALNMMDVLVKTGHRTINLKKLSYALQVPVIATTATKPAALQELVQTIQAPLPKPYAFPEYDARLESALTMLEDVIDQKVPADRLRWYAIKVFEKDPQVVKQLAFSSDEQHQMNEILRTAEHVFDDTTDSIIVNARYDFIARVIAMCVVDKDDFVMSMSDKIDRIVTDRYLALPIFVLVMWAVYYLSIQTIGTIGSDYLNDTVFGGWLPSVVGGTLKSWAVAPWLSGLIVDGLIGGIGSVLGFLPQIMMLFLCLGILEDCGYMARIAFVMDRLFHRFNLSGKSFIPILIATGCGVPGIMATRTIESEKDRRMSIMLTTFMPCSAKLTVIALVSGTFFPSTSWVAPSAYFMGIIAVICSGIFLKKTALFAGPPAPFVMELPAYHLPRLTNLYRSVMSRARAFVQKAGTIIFLSCVLLWFLSNFNFGLQMVDENDSMLRGLGTVIAPVFAPLGFGDWHATVATLAGLIAKENCVGTLHISFGAGSASGFGQALRATYPAMAGYAFLVFNLLCAPCFAAIGTMYKEFGDARWTWRAVGYQTGVAYLLTMLIYQGSLVVSGQASVMSIGLVLVAILVIVYGLLIKRPVPAIASSY
>NZ_CP048003.1|WP_003579810.1|2053886_2054378_+|ferrous-iron-transport-protein-A
MQALIDVRESGAYLLMSVGGSGALRRHLAEMGLVVGKKVTVVQPASKLSGMVIFFQGQRLAISDEIASLLVVRPFAMDADTPAIALADLPLRQAGLIRTIKGDPPLRHRLMDMGLTKGTLVKIHQIAPLGDPIELAVRGYKLSIRKQDAAHVLVTEVTSDGDT
>NZ_CP048003.1|WP_003579797.1|2066537_2068004_+|peptide-MFS-transporter
MNNSKDRTFMGHPRGLLTLSMTEFWERFSYYGMRAILIYYMYYAVEKGGLGFDQPTALSIMSIYGSLVYLSATIGGFISDRLLGSRRTVFWGGVLIMLGHIVLSLPIGATGLFGSIVLIVLGTGLLKPNVSEMVGSLYPEDDLRRDSGFSIFVMGINFGSLIAPIFVPWMADKVNFHAGFSLAAIGMFVGLIFYVIDGRKYINPADNTAPDPLKPEDVRPLVIRVVVAIAAVGVILLAMAGFNALTIANVISLITLIAIGLPIWYFVLMIRSKKVTKTERSRVIAYIPLFLAAMIFWAIEEQGSVVLALFAAQQTKLDFGFFKILPGNFQTLNPLFILLYGPLFAWLWMKLGKRQPTSPKKFYLGLIFAGASYLWMVIPVILFGSSAKVSPLWLVMSWAIVEIGEMLISPVGLSVTTKLAPKAYSSQMMSMWFLADASAQAVNAQIVRFYTPNHEVAYFAIVGLVSVGFAVVLAFFTPRIEKLMQGVN
>NZ_CP048003.1|WP_003579795.1|2068065_2068893_+|phosphoesterase
MVKIAFSVDNHFDVNRVDGFEMLKKQAAYLVEHDYQIYVNAGDTYNDFTKSLAYFRALQAEVGSAVTIRFLAGNHDMVNGATYDEIQSAVDPLYLHEKILPVPGTNAVIIGNNGWYDYSLGQLGNMKTDAEYAQWKRAFWIDSAIDAPVTDAARMQRVLTTTKAALQANQTHQMIYVTHFVPIREAMVYTVDRPPWQMATALMGSAKLGDLLTGKVSAVVFGHEHFRDAPKLLSGTTYYHQPLGYGLKRLFEWQSQDWWTEWRQTLVTLTVPTLS
>NZ_CP048003.1|WP_003579793.1|2069221_2071198_+|S9-family-peptidase
MAIKATDLFKLVSLSYPSATDDGYFVQENRISEADNTYYQRICFVNHRGGTIAYGFDQKHDRHPLLSPDQQWLAFLSQASDKTTQVFVQAVNGGTAKQFSAEKEGVSYFGWQADSQALFIQTTVGAKPKKTDKQWPQPVTVSRVPYKLNGVGLLPEHVAYELRVQRLRQKTSRLVMGREHEFEVGAISPDGQTLAFTAERLPDDPNDFSQATYLLNLADQQVTMVNDQLPQAALSPEAFSADGKQLLLVGSDNHLPNVSQSHLWHYDLATKTLQDVADDIDFDIPGHVNGDFQQDLSEKVADFATADYYLTIGFDHGKTSLYAGGPDEQLTPLIGGRRHVTDYALTPDHHGVVFTESTMTVPSRLSYFDLATEEEHVIYDPNRRVTRDMGLVTPQTFNFQRDGFEIEGWYFPPQQATASHPAILYVHGGPAVGYGYTFFHEMQFLAAQGYGVICPNPRGGLGYGEAFTAAVIKHYGQGDYEDCMASVDEALKLDTTIDPDRLYVAGGSYGGFMTNWIVTHTHRFKAAVTQRSIANWLSMYGTSDIGYFFTPWELEGKWTGDLSDVKSLWDFSPLAHIDFAQTPTLVMHSENDQRCPIGQGEEFYIGLKLHGVDTKFMRFPNATHELSRSGLPNLRLARLAALVDWFKTHSATEESHQA
>NZ_CP048003.1|WP_003566103.1|2071210_2072008_+|pyrroline-5-carboxylate-reductase
MTIGFIGAGNMARAIITGLLAKNAVTPEEIVLHGGQPIHYEPYAAKIGAKAVASNQAVADTADIVFLAVAPKLGVPILKTIGPTLKQRQVPIVSMLTGVSLATLEDALGSQDQPVLRIMPNVNVAINAGMTAYAANDSVAGQLDGLLDLLNVLGKTMALPEDQFSTFVALAGSSPAFVYLFIDSLSRAGVKYGLTKKQATAIAAQAVMGSAQNVLASEQSPFDLIDQVSSPGGTTVAGLLAMEQAGLMSAVIKGVDATIAKDRQG
>NZ_CP048003.1|WP_003579780.1|2072114_2073260_+|N-acetylglucosamine-6-phosphate-deacetylase
MTVTVLKHATIYTGLERIDDGYVRFDDKILAVGDMFDYRAQSGEQTFDLQGKTLIPGFIDVHAHGGYGFDAMDGDADQIDEMATKMMTHEGVTTLFATTMTQSTENIDKAMRGVKQAAERNHIIQGVHLEGPFISKVFKGAQPEEYIKNPNVDLVKQWQELSGDLVKLITYAPEDEGSQAFEDYLLAHNIVPSVGHSNATREQMLHSKATHVTHLYNAQRGLRHREPGVTGHAMLEDNMYCELICDGFHIVPDMLRLAFDQKGPERIELVTDSMRSKGMPEGKSELGGQTVYVKDKQARLKDGTLAGSVLMYKDAFKNAMSFMDASLFDAVEMSSVNQAREFNLTSKGTLEVGKDADINVLDRNNDLVATYSYGVKHDTED
>NZ_CP048003.1|WP_003566099.1|2073284_2073986_+|GntR-family-transcriptional-regulator
MDAPVYIQIHNAIRADIEAGKWRVGDRIPSERDLAVTFKVSRMTLRQAIQTLVDEGILERRVGSGTYVANQKVQEKMSGVTSFTDLMQAQGKVPSSKTVSYHVAQPTSSEVEKLKLEPKEQVLRMERIRYADKIPISFETAAVPYNLVKNFTKKEMTASFYHTLEKKGGYVLGGAQQTVSAMLASERISEYLDIKRGEAILRLRQVSFLQDGTPFEYVRTQYVGERFEFYLER
>NZ_CP048003.1|WP_016380531.1|2074121_2074340_+|hypothetical-protein
MREQAQKPAHKDLRQEWAKASRQCAGSETREQAQKPAHKDLKPKWPKPSYLGLRPLMFRFLTAPVRALSHFL
>NZ_CP048003.1|WP_003660548.1|2074428_2075895_+|nicotinate-phosphoribosyltransferase
MMTTQLGEGLTLHTDFYELNMMNTFFEQGISERNAVFEVFFRDLPFGSGFAVFAGLEHVMDYLNHLKFSEDDLAYLQSQTDYSDAFIDYLRHLKFTCTVKSALEGDLVFNNEPIWQIEGPLAQAQLVETAVLNMINYQTLVATKAARIRSVAGADPLMEFGTRRAQETAAALWGTRAAYIGGFNATSNVLAGKEFGIPISGTHAHSLVQAYGNDYDAFKAYARSNKDVVFLVDTYDTLRSGVPAAIKVANEFKGKINFLGVRIDSGDMAFISKRVRQQLDDAGYESAKIYASNDLDENTIQNLKMQGAKIDIWGVGTRLITAYDQPALGAVFKLVSIEDAAGKMRDTIKLSNNAEKVSTPGKKQVWRITRQDDGKSEGDYVALADETIDTQRSLYMFHPNFPYINKTVKNFEAKPLLQTIYDKGQQVYHTPPLQEVQAYATRSTNALWDEYRRILNPQDYPVDLSQRVWDNKMDLIKAVKSAVADREE
>NZ_CP048003.1|WP_003579778.1|2075898_2077092_+|serine-hydrolase
MRASKRRSQYRWLILSLLVGLVVGIAAYASYDHFYLKPQIEAKEERTRRKYETELNRHRAVEQRLQNETRTATSATDKLMQPVNQAEAKPFMKILEANHFSGTALMIRRGKIILNTGLGYADAESGRLNGPETLYQIGSIQKGLTAVLLMRLVEQGKVHLSDPISKYLTGIRTGKQVTLRMMLNMRSGLSLTRAQSASLSDAGIVRWSIANLNYGTVRYDYQPVNYVLLAGVIEKVTGRLYADLIQQEIFKKLKLTHSGFMPELFHESNQAFGYSGPINNPYAKRYTEPSVNYNRELGTGNIYTSAGDLYQIIKAVNQGKIISTASLKALRNLDNGQYTAGVYNFGSYTLTHGVVASQSAGTMIDTSGQNAVVLLANTDKITQGLIKNLYLNMIKGV
>NZ_CP048003.1|WP_003566083.1|2077094_2077922_+|ammonia-dependent-NAD(+)-synthetase
MRPLQAEIIKALGVQATIDPETEVRRSVDFLKAYLKKNTFLKTYVLGISGGQDSSLAGALTEKAMQEMRAETGDDAYQFIAVRLPYGEQADEADAMAAIDFMHADVVKRVNIKPSVDAMVAAVEADGSKISDFNKGNIKARMRMIAQYAIAGNNAGAVIGTDHAAEAVTGFYTKFGDGGADLTPLYRLDKRQGAALLKVLGAPAHLYEKAPTADLEDNRPALPDEVALGVKYKDIDDYLEGKDVSDQAAETIEKWYQKTAHKRHLPITVFDNFWK

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP048003_3	3.2\|1714740\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1714740-1714769	30	MN830258	Lactobacillus phage JNU_P9, complete genome	39045-39074	0	1.0
NZ_CP048003_3	3.2\|1714740\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1714740-1714769	30	NC_005893	Lactobacillus phage phiAT3, complete genome	34157-34186	1	0.967
NZ_CP048003_3	3.2\|1714740\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1714740-1714769	30	AY605066	Bacteriophage phi AT3, complete sequence	34157-34186	1	0.967
NZ_CP048003_3	3.1\|1714674\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1714674-1714703	30	NC_007501	Lactobacillus phage Lc-Nu, complete genome	30801-30830	2	0.933
NZ_CP048003_3	3.1\|1714674\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1714674-1714703	30	AY131267	Bacteriophage Lc-Nu, complete genome	30801-30830	2	0.933
NZ_CP048003_3	3.4\|1714872\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1714872-1714901	30	KC171647	Lactobacillus phage PL-1, complete genome	3062-3091	2	0.933
NZ_CP048003_3	3.4\|1714872\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1714872-1714901	30	NC_022756	Lactobacillus phage J-1, complete genome	3062-3091	2	0.933
NZ_CP048003_3	3.4\|1714872\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1714872-1714901	30	MF999224	Lactobacillus phage LJ, complete genome	19462-19491	2	0.933
NZ_CP048003_3	3.4\|1714872\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1714872-1714901	30	MH983004	Lactobacillus phage BH1, complete genome	3062-3091	2	0.933
NZ_CP048003_2	2.1\|375254\|31\|NZ_CP048003\|CRISPRCasFinder	375254-375284	31	NZ_CP012188	Lactobacillus paracasei strain CAUH35 plasmid unnamed1, complete sequence	5534-5564	3	0.903
NZ_CP048003_3	3.4\|1714872\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1714872-1714901	30	AJ251789	Lactobacillus casei bacteriophage A2 complete genome	3074-3103	3	0.9
NZ_CP048003_3	3.4\|1714872\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1714872-1714901	30	NC_004112	Lactobacillus phage A2, complete genome	3074-3103	3	0.9
NZ_CP048003_2	2.1\|375254\|31\|NZ_CP048003\|CRISPRCasFinder	375254-375284	31	NZ_CP016356	Lactobacillus paracasei subsp. paracasei strain TMW 1.1434 plasmid pL11434-1, complete sequence	100575-100605	4	0.871
NZ_CP048003_2	2.1\|375254\|31\|NZ_CP048003\|CRISPRCasFinder	375254-375284	31	NZ_CP029547	Lactobacillus paracasei strain EG9 plasmid pEG9A, complete sequence	15730-15760	4	0.871
NZ_CP048003_2	2.1\|375254\|31\|NZ_CP048003\|CRISPRCasFinder	375254-375284	31	NZ_CP017262	Lactobacillus paracasei strain FAM18149 plasmid pFAM18149.21, complete sequence	60049-60079	4	0.871
NZ_CP048003_2	2.1\|375254\|31\|NZ_CP048003\|CRISPRCasFinder	375254-375284	31	NZ_CP035564	Lactobacillus paracasei strain SRCM103299 plasmid unnamed1	16920-16950	5	0.839
NZ_CP048003_2	2.1\|375254\|31\|NZ_CP048003\|CRISPRCasFinder	375254-375284	31	NZ_CP029537	Lactobacillus paracasei strain LC355 plasmid unnamed1, complete sequence	16947-16977	5	0.839
NZ_CP048003_2	2.1\|375254\|31\|NZ_CP048003\|CRISPRCasFinder	375254-375284	31	NZ_CP014988	Lactobacillus paracasei strain IIA plasmid unnamed3, complete sequence	60973-61003	5	0.839
NZ_CP048003_3	3.22\|1716060\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1716060-1716089	30	MT774393	CrAssphage cr127_1, complete genome	42841-42870	5	0.833
NZ_CP048003_3	3.28\|1716456\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1716456-1716485	30	NZ_CP031268	Staphylococcus warneri strain 16A plasmid unnamed2	6674-6703	5	0.833
NZ_CP048003_3	3.30\|1716588\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1716588-1716617	30	MK448743	Streptococcus phage Javan371, complete genome	13502-13531	5	0.833
NZ_CP048003_2	2.1\|375254\|31\|NZ_CP048003\|CRISPRCasFinder	375254-375284	31	NZ_CP012188	Lactobacillus paracasei strain CAUH35 plasmid unnamed1, complete sequence	5414-5444	6	0.806
NZ_CP048003_2	2.1\|375254\|31\|NZ_CP048003\|CRISPRCasFinder	375254-375284	31	NZ_CP016356	Lactobacillus paracasei subsp. paracasei strain TMW 1.1434 plasmid pL11434-1, complete sequence	100695-100725	6	0.806
NZ_CP048003_2	2.1\|375254\|31\|NZ_CP048003\|CRISPRCasFinder	375254-375284	31	NZ_CP035564	Lactobacillus paracasei strain SRCM103299 plasmid unnamed1	16800-16830	6	0.806
NZ_CP048003_2	2.1\|375254\|31\|NZ_CP048003\|CRISPRCasFinder	375254-375284	31	NZ_CP029547	Lactobacillus paracasei strain EG9 plasmid pEG9A, complete sequence	15610-15640	6	0.806
NZ_CP048003_2	2.1\|375254\|31\|NZ_CP048003\|CRISPRCasFinder	375254-375284	31	NZ_CP029537	Lactobacillus paracasei strain LC355 plasmid unnamed1, complete sequence	17067-17097	6	0.806
NZ_CP048003_2	2.1\|375254\|31\|NZ_CP048003\|CRISPRCasFinder	375254-375284	31	NZ_CP014988	Lactobacillus paracasei strain IIA plasmid unnamed3, complete sequence	60853-60883	6	0.806
NZ_CP048003_3	3.11\|1715334\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715334-1715363	30	NZ_CP040339	Bacillus luti strain FJ plasmid unnamed3, complete sequence	24291-24320	6	0.8
NZ_CP048003_3	3.22\|1716060\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1716060-1716089	30	NZ_CP039224	Piscirickettsia salmonis strain NVI 5692 plasmid unnamed5, complete sequence	31378-31407	6	0.8
NZ_CP048003_2	2.1\|375254\|31\|NZ_CP048003\|CRISPRCasFinder	375254-375284	31	NZ_LR134465	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 23, complete sequence	235091-235121	7	0.774
NZ_CP048003_3	3.3\|1714806\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1714806-1714835	30	NZ_CP040459	Pseudomonas stutzeri strain PheN2 plasmid unnamed, complete sequence	40501-40530	7	0.767
NZ_CP048003_3	3.9\|1715202\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715202-1715231	30	MN176219	Bacillus phage 000TH010, complete genome	28194-28223	7	0.767
NZ_CP048003_3	3.15\|1715598\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715598-1715627	30	NZ_CP010135	Escherichia coli strain D1 plasmid A, complete genome	19143-19172	7	0.767
NZ_CP048003_3	3.15\|1715598\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715598-1715627	30	NZ_CP041417	Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence	214547-214576	7	0.767
NZ_CP048003_3	3.16\|1715664\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715664-1715693	30	NZ_CP016462	Blastomonas sp. RAC04 plasmid pBSY18_1, complete sequence	79182-79211	7	0.767
NZ_CP048003_3	3.18\|1715796\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715796-1715825	30	NZ_CP034186	Deinococcus sp. S14-83 strain S14-83T plasmid unnamed2, complete sequence	376623-376652	7	0.767
NZ_CP048003_3	3.18\|1715796\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715796-1715825	30	NC_019313	Sinorhizobium meliloti plasmid pHRC017, complete sequence	183578-183607	7	0.767
NZ_CP048003_3	3.21\|1715994\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715994-1716023	30	NZ_CP045273	Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence	950310-950339	7	0.767
NZ_CP048003_3	3.21\|1715994\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715994-1716023	30	MT601272	Bacillus phage vB_BsuS-Goe11, complete genome	21559-21588	7	0.767
NZ_CP048003_3	3.21\|1715994\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715994-1716023	30	MT366947	Bacillus phage Hyb2phi3Ts-SPbeta, complete genome	20807-20836	7	0.767
NZ_CP048003_3	3.21\|1715994\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715994-1716023	30	KY030782	Bacillus phage phi3T, complete genome	20807-20836	7	0.767
NZ_CP048003_3	3.21\|1715994\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715994-1716023	30	MT366948	Bacillus phage Hyb3phi3Ts-SPbeta, complete genome	20807-20836	7	0.767
NZ_CP048003_3	3.21\|1715994\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715994-1716023	30	MT366945	Bacillus phage phi3Ts, complete genome	20807-20836	7	0.767
NZ_CP048003_3	3.22\|1716060\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1716060-1716089	30	JN638751	Bacillus phage G, complete genome	253284-253313	7	0.767
NZ_CP048003_3	3.25\|1716258\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1716258-1716287	30	NC_010553	Burkholderia ambifaria MC40-6 plasmid pBMC401, complete sequence	104218-104247	7	0.767
NZ_CP048003_3	3.25\|1716258\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1716258-1716287	30	NC_010553	Burkholderia ambifaria MC40-6 plasmid pBMC401, complete sequence	105358-105387	7	0.767
NZ_CP048003_3	3.40\|1717248\|30\|NZ_CP048003\|CRISPRCasFinder,CRT	1717248-1717277	30	NZ_AP018520	Sphingobium sp. YG1 plasmid pYGP1, complete sequence	189876-189905	7	0.767
NZ_CP048003_3	3.13\|1715466\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715466-1715495	30	NZ_CP028945	Vibrio sp. dhg plasmid unnamed1, complete sequence	23136-23165	8	0.733
NZ_CP048003_3	3.21\|1715994\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715994-1716023	30	NZ_CP045273	Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence	950150-950179	8	0.733
NZ_CP048003_3	3.21\|1715994\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715994-1716023	30	NZ_CP045273	Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence	950190-950219	8	0.733
NZ_CP048003_3	3.21\|1715994\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715994-1716023	30	NZ_CP045273	Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence	950270-950299	8	0.733
NZ_CP048003_3	3.21\|1715994\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715994-1716023	30	NZ_CP045273	Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence	950390-950419	8	0.733
NZ_CP048003_3	3.21\|1715994\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715994-1716023	30	KJ019135	Synechococcus phage ACG-2014a isolate Syn7803C101, complete genome	54737-54766	8	0.733
NZ_CP048003_3	3.21\|1715994\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715994-1716023	30	KJ019114	Synechococcus phage ACG-2014a isolate Syn7803US60, complete genome	54643-54672	8	0.733
NZ_CP048003_3	3.21\|1715994\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715994-1716023	30	KJ019138	Synechococcus phage ACG-2014a isolate Syn7803C107, complete genome	54649-54678	8	0.733
NZ_CP048003_3	3.21\|1715994\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715994-1716023	30	KJ019122	Synechococcus phage ACG-2014a isolate Syn7803US79, complete genome	54638-54667	8	0.733
NZ_CP048003_3	3.21\|1715994\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715994-1716023	30	KJ019055	Synechococcus phage ACG-2014a isolate Syn7803C86, complete genome	54736-54765	8	0.733
NZ_CP048003_3	3.21\|1715994\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715994-1716023	30	KJ019038	Synechococcus phage ACG-2014a isolate Syn7803C59, complete genome	54423-54452	8	0.733
NZ_CP048003_3	3.21\|1715994\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715994-1716023	30	KJ019068	Synechococcus phage ACG-2014a isolate Syn7803US102, complete genome	54642-54671	8	0.733
NZ_CP048003_3	3.21\|1715994\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715994-1716023	30	KJ019137	Synechococcus phage ACG-2014a isolate Syn7803C104, complete genome	54733-54762	8	0.733
NZ_CP048003_3	3.21\|1715994\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715994-1716023	30	KJ019157	Synechococcus phage ACG-2014a isolate Syn7803C31, complete genome	54737-54766	8	0.733
NZ_CP048003_3	3.21\|1715994\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715994-1716023	30	KJ019087	Synechococcus phage ACG-2014a isolate Syn7803US19, complete genome	54638-54667	8	0.733
NZ_CP048003_3	3.21\|1715994\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715994-1716023	30	KJ019076	Synechococcus phage ACG-2014a isolate Syn7803US112, complete genome	54642-54671	8	0.733
NZ_CP048003_3	3.21\|1715994\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715994-1716023	30	KJ019065	Synechococcus phage ACG-2014a isolate Syn7803C99, complete genome	54636-54665	8	0.733
NZ_CP048003_3	3.21\|1715994\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715994-1716023	30	KJ019026	Synechococcus phage ACG-2014a isolate Syn7803C42, complete genome	54644-54673	8	0.733
NZ_CP048003_3	3.21\|1715994\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715994-1716023	30	KJ019081	Synechococcus phage ACG-2014a isolate Syn7803US117, complete genome	54643-54672	8	0.733
NZ_CP048003_3	3.21\|1715994\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715994-1716023	30	KJ019033	Synechococcus phage ACG-2014a isolate Syn7803C53, complete genome	54489-54518	8	0.733
NZ_CP048003_3	3.21\|1715994\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715994-1716023	30	NC_023584	Synechococcus phage S-MbCM100, complete genome	55431-55460	8	0.733
NZ_CP048003_3	3.21\|1715994\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715994-1716023	30	KJ019153	Synechococcus phage ACG-2014a isolate Syn7803C26, complete genome	54638-54667	8	0.733
NZ_CP048003_3	3.21\|1715994\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715994-1716023	30	KJ019158	Synechococcus phage ACG-2014a isolate Syn7803C33, complete genome	54642-54671	8	0.733
NZ_CP048003_3	3.21\|1715994\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715994-1716023	30	KJ019067	Synechococcus phage ACG-2014a isolate Syn7803US101, complete genome	54643-54672	8	0.733
NZ_CP048003_3	3.21\|1715994\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715994-1716023	30	KJ019039	Synechococcus phage ACG-2014a isolate Syn7803C60, complete genome	54637-54666	8	0.733
NZ_CP048003_3	3.21\|1715994\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715994-1716023	30	KJ019030	Synechococcus phage ACG-2014a isolate Syn7803C47, complete genome	54641-54670	8	0.733
NZ_CP048003_3	3.21\|1715994\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715994-1716023	30	KJ019163	Synechococcus phage ACG-2014a isolate Syn7803C38, complete genome	54633-54662	8	0.733
NZ_CP048003_3	3.21\|1715994\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715994-1716023	30	KJ019116	Synechococcus phage ACG-2014a isolate Syn7803US62, complete genome	54452-54481	8	0.733
NZ_CP048003_3	3.21\|1715994\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715994-1716023	30	KJ019088	Synechococcus phage ACG-2014a isolate Syn7803US1, complete genome	54724-54753	8	0.733
NZ_CP048003_3	3.21\|1715994\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715994-1716023	30	KJ019084	Synechococcus phage ACG-2014a isolate Syn7803US123, complete genome	54637-54666	8	0.733
NZ_CP048003_3	3.29\|1716522\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1716522-1716551	30	KP671755	Vibrio phage ValKK3, complete genome	16016-16045	8	0.733
NZ_CP048003_3	3.29\|1716522\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1716522-1716551	30	MH321493	Salmonella phage Skate, complete genome	25420-25449	8	0.733
NZ_CP048003_3	3.29\|1716522\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1716522-1716551	30	KY860935	Salmonella phage LPST10, complete genome	16180-16209	8	0.733
NZ_CP048003_3	3.29\|1716522\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1716522-1716551	30	MN871490	UNVERIFIED: Salmonella phage SEzh_1, complete genome	25308-25337	8	0.733
NZ_CP048003_3	3.29\|1716522\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1716522-1716551	30	KT919972	Vibrio phage phi-Grn1, complete genome	226148-226177	8	0.733
NZ_CP048003_3	3.29\|1716522\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1716522-1716551	30	MN692673	Salmonella phage VB_StyS_BS5, complete genome	15797-15826	8	0.733
NZ_CP048003_3	3.29\|1716522\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1716522-1716551	30	MH791402	UNVERIFIED: Salmonella phage Segz_1, complete genome	19684-19713	8	0.733
NZ_CP048003_3	3.35\|1716918\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1716918-1716947	30	NZ_CP032828	Sphingomonas sp. YZ-8 plasmid unnamed1, complete sequence	148041-148070	8	0.733
NZ_CP048003_3	3.35\|1716918\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1716918-1716947	30	NZ_CP041205	Rhizobium sp. NIBRBAC000502774 plasmid pMK-2, complete sequence	533174-533203	8	0.733
NZ_CP048003_3	3.35\|1716918\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1716918-1716947	30	NC_015184	Agrobacterium sp. H13-3 plasmid pAspH13-3a, complete sequence	399866-399895	8	0.733
NZ_CP048003_3	3.35\|1716918\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1716918-1716947	30	CP047390	Agrobacterium sp. CGMCC 11546 plasmid pB	172783-172812	8	0.733
NZ_CP048003_3	3.35\|1716918\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1716918-1716947	30	NZ_CP033036	Agrobacterium fabrum strain 12D13 plasmid pAt12D13a, complete sequence	283508-283537	8	0.733
NZ_CP048003_3	3.35\|1716918\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1716918-1716947	30	NC_003064	Agrobacterium fabrum str. C58 plasmid At, complete sequence	450407-450436	8	0.733
NZ_CP048003_3	3.35\|1716918\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1716918-1716947	30	NZ_CP032919	Agrobacterium tumefaciens strain 15955 plasmid pAt15955, complete sequence	311399-311428	8	0.733
NZ_CP048003_3	3.35\|1716918\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1716918-1716947	30	NZ_CP033029	Agrobacterium tumefaciens strain A6 plasmid pAtA6, complete sequence	311483-311512	8	0.733
NZ_CP048003_3	3.6\|1715004\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715004-1715033	30	NZ_CP053977	Bacillus thuringiensis strain FDAARGOS_795 plasmid unnamed1, complete sequence	19569-19598	9	0.7
NZ_CP048003_3	3.6\|1715004\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715004-1715033	30	NZ_CP034684	Bacillus sp. BD59S plasmid pBTBD59S1, complete sequence	37751-37780	9	0.7
NZ_CP048003_3	3.6\|1715004\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715004-1715033	30	NZ_CP009332	Bacillus thuringiensis strain HD1011 plasmid 3, complete sequence	10854-10883	9	0.7
NZ_CP048003_3	3.15\|1715598\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715598-1715627	30	MN961670	Pseudomonas putida strain 420352 plasmid p420352-IMP, complete sequence	308409-308438	9	0.7
NZ_CP048003_3	3.16\|1715664\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715664-1715693	30	NZ_CP026804	Shigella flexneri strain 89-141 plasmid unnamed1	55080-55109	9	0.7
NZ_CP048003_3	3.16\|1715664\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715664-1715693	30	NZ_CP026794	Shigella flexneri strain 74-1170 plasmid unnamed	15528-15557	9	0.7
NZ_CP048003_3	3.16\|1715664\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715664-1715693	30	NZ_CP026794	Shigella flexneri strain 74-1170 plasmid unnamed	244734-244763	9	0.7
NZ_CP048003_3	3.16\|1715664\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715664-1715693	30	NZ_CP033511	Shigella flexneri strain 2016AM-0877 plasmid p2016AM-0877, complete sequence	186579-186608	9	0.7
NZ_CP048003_3	3.16\|1715664\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715664-1715693	30	NZ_CP026789	Shigella flexneri 2a strain ATCC 29903 plasmid unnamed1, complete sequence	87826-87855	9	0.7
NZ_CP048003_3	3.16\|1715664\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715664-1715693	30	NZ_CP034059	Shigella flexneri strain FDAARGOS_535 plasmid unnamed1, complete sequence	181875-181904	9	0.7
NZ_CP048003_3	3.16\|1715664\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715664-1715693	30	NZ_CP024476	Shigella flexneri 7b strain 94-3007 plasmid unnamed3, complete sequence	212087-212116	9	0.7
NZ_CP048003_3	3.16\|1715664\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715664-1715693	30	NZ_LR213456	Shigella flexneri strain AUSMDU00008332 isolate AUSMDU00008332 plasmid 2	87047-87076	9	0.7
NZ_CP048003_3	3.16\|1715664\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715664-1715693	30	NZ_CP026771	Shigella flexneri Y strain 93-3063 plasmid unnamed3, complete sequence	60107-60136	9	0.7
NZ_CP048003_3	3.16\|1715664\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715664-1715693	30	NZ_CP044157	Shigella flexneri strain AR-0424 plasmid pAR-0424-2, complete sequence	215777-215806	9	0.7
NZ_CP048003_3	3.16\|1715664\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715664-1715693	30	NZ_CP026837	Shigella boydii strain ATCC 49812 plasmid unnamed, complete sequence	139761-139790	9	0.7
NZ_CP048003_3	3.16\|1715664\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715664-1715693	30	NC_017319	Shigella flexneri 2002017 plasmid pSFxv_1, complete sequence	73057-73086	9	0.7
NZ_CP048003_3	3.16\|1715664\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715664-1715693	30	NZ_CP012142	Shigella flexneri 4c strain 1205 plasmid 1205p2, complete sequence	73059-73088	9	0.7
NZ_CP048003_3	3.16\|1715664\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715664-1715693	30	NZ_CP044154	Shigella flexneri strain AR-0425 plasmid pAR-0425-2, complete sequence	10672-10701	9	0.7
NZ_CP048003_3	3.16\|1715664\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715664-1715693	30	NZ_CP034933	Shigella flexneri strain 2013C-3749 plasmid p2013C-3749-2, complete sequence	51375-51404	9	0.7
NZ_CP048003_3	3.16\|1715664\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715664-1715693	30	NZ_CP037924	Shigella flexneri 5a str. M90T plasmid pWR100, complete sequence	18843-18872	9	0.7
NZ_CP048003_3	3.16\|1715664\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715664-1715693	30	NZ_CP026800	Shigella flexneri strain NCTC 9728 plasmid unnamed, complete sequence	16783-16812	9	0.7
NZ_CP048003_3	3.16\|1715664\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715664-1715693	30	NC_002698	Shigella flexneri 5a virulence plasmid pWR501, complete sequence	70426-70455	9	0.7
NZ_CP048003_3	3.16\|1715664\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715664-1715693	30	NZ_CP030773	Shigella flexneri 1c strain Y394 plasmid pINV-Y394, complete sequence	51763-51792	9	0.7
NZ_CP048003_3	3.16\|1715664\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715664-1715693	30	NZ_CP020087	Shigella flexneri 1a strain 0670 plasmid unnamed1, complete sequence	171006-171035	9	0.7
NZ_CP048003_3	3.16\|1715664\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715664-1715693	30	NZ_CP020337	Shigella flexneri 4c strain 1602 plasmid unnamed1, complete sequence	37214-37243	9	0.7
NZ_CP048003_3	3.16\|1715664\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715664-1715693	30	NC_019197	Shigella flexneri plasmid pSF5, complete sequence	99920-99949	9	0.7
NZ_CP048003_3	3.16\|1715664\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715664-1715693	30	NZ_CP045942	Shigella flexneri 2a strain AUSMDU00010535 plasmid pAUSMDU00010535_01, complete sequence	91633-91662	9	0.7
NZ_CP048003_3	3.16\|1715664\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715664-1715693	30	NC_004851	Shigella flexneri 2a str. 301 plasmid pCP301, complete sequence	74402-74431	9	0.7
NZ_CP048003_3	3.16\|1715664\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1715664-1715693	30	NZ_CP026830	Shigella dysenteriae strain ATCC 12039 plasmid unnamed, complete sequence	28338-28367	9	0.7
NZ_CP048003_3	3.22\|1716060\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1716060-1716089	30	NZ_CP031220	Arcobacter mytili LMG 24559 plasmid pAMYT, complete sequence	125268-125297	9	0.7
NZ_CP048003_3	3.22\|1716060\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1716060-1716089	30	NC_049481	Lactococcus phage CHPC361, complete genome	21399-21428	9	0.7
NZ_CP048003_3	3.27\|1716390\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1716390-1716419	30	NZ_CP021449	Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence	1556860-1556889	9	0.7
NZ_CP048003_3	3.37\|1717050\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1717050-1717079	30	NZ_HG938354	Neorhizobium galegae bv. orientalis str. HAMBI 540 plasmid pHAMBI540a, complete sequence	407276-407305	9	0.7
NZ_CP048003_3	3.22\|1716060\|30\|NZ_CP048003\|PILER-CR,CRISPRCasFinder,CRT	1716060-1716089	30	MF448569	Lactococcus phage 88605, complete genome	22649-22678	10	0.667

1. spacer 3.2|1714740|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to MN830258 (Lactobacillus phage JNU_P9, complete genome) position: , mismatch: 0, identity: 1.0

ttgctcatattggaatcaatgtctttcgcg	CRISPR spacer
ttgctcatattggaatcaatgtctttcgcg	Protospacer
******************************

2. spacer 3.2|1714740|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to NC_005893 (Lactobacillus phage phiAT3, complete genome) position: , mismatch: 1, identity: 0.967

ttgctcatattggaatcaatgtctttcgcg	CRISPR spacer
ttgctcatattggaatcaatgtctttcgct	Protospacer
*****************************

3. spacer 3.2|1714740|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to AY605066 (Bacteriophage phi AT3, complete sequence) position: , mismatch: 1, identity: 0.967

ttgctcatattggaatcaatgtctttcgcg	CRISPR spacer
ttgctcatattggaatcaatgtctttcgct	Protospacer
*****************************

4. spacer 3.1|1714674|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to NC_007501 (Lactobacillus phage Lc-Nu, complete genome) position: , mismatch: 2, identity: 0.933

tacaacgaagccattcggaaattagcagcg	CRISPR spacer
tacaacgaagccattcagaaattagcagtg	Protospacer
****************.***********.*

5. spacer 3.1|1714674|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to AY131267 (Bacteriophage Lc-Nu, complete genome) position: , mismatch: 2, identity: 0.933

tacaacgaagccattcggaaattagcagcg	CRISPR spacer
tacaacgaagccattcagaaattagcagtg	Protospacer
****************.***********.*

6. spacer 3.4|1714872|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to KC171647 (Lactobacillus phage PL-1, complete genome) position: , mismatch: 2, identity: 0.933

caaccttacagaagttcttcaagagcggtt	CRISPR spacer
caacgttacagaagttcttcaagagcggct	Protospacer
**** ***********************.*

7. spacer 3.4|1714872|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to NC_022756 (Lactobacillus phage J-1, complete genome) position: , mismatch: 2, identity: 0.933

caaccttacagaagttcttcaagagcggtt	CRISPR spacer
caacgttacagaagttcttcaagagcggct	Protospacer
**** ***********************.*

8. spacer 3.4|1714872|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to MF999224 (Lactobacillus phage LJ, complete genome) position: , mismatch: 2, identity: 0.933

caaccttacagaagttcttcaagagcggtt	CRISPR spacer
caacgttacagaagttcttcaagagcggct	Protospacer
**** ***********************.*

9. spacer 3.4|1714872|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to MH983004 (Lactobacillus phage BH1, complete genome) position: , mismatch: 2, identity: 0.933

caaccttacagaagttcttcaagagcggtt	CRISPR spacer
caacgttacagaagttcttcaagagtggtt	Protospacer
**** ********************.****

10. spacer 2.1|375254|31|NZ_CP048003|CRISPRCasFinder matches to NZ_CP012188 (Lactobacillus paracasei strain CAUH35 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.903

gccactcaacgaagccatatctggccccgtg	CRISPR spacer
gccactcaacgaagccatatctggcccagca	Protospacer
*************************** *..

11. spacer 3.4|1714872|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to AJ251789 (Lactobacillus casei bacteriophage A2 complete genome) position: , mismatch: 3, identity: 0.9

caaccttacagaagttcttcaagagcggtt	CRISPR spacer
caacgttgcagaagttcttcaagagcggct	Protospacer
**** **.********************.*

12. spacer 3.4|1714872|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to NC_004112 (Lactobacillus phage A2, complete genome) position: , mismatch: 3, identity: 0.9

caaccttacagaagttcttcaagagcggtt	CRISPR spacer
caacgttgcagaagttcttcaagagcggct	Protospacer
**** **.********************.*

13. spacer 2.1|375254|31|NZ_CP048003|CRISPRCasFinder matches to NZ_CP016356 (Lactobacillus paracasei subsp. paracasei strain TMW 1.1434 plasmid pL11434-1, complete sequence) position: , mismatch: 4, identity: 0.871

gccactcaacgaagccatatctggccccgtg	CRISPR spacer
gccactcaacgaagccatatctggaccagct	Protospacer
************************ ** *.

14. spacer 2.1|375254|31|NZ_CP048003|CRISPRCasFinder matches to NZ_CP029547 (Lactobacillus paracasei strain EG9 plasmid pEG9A, complete sequence) position: , mismatch: 4, identity: 0.871

gccactcaacgaagccatatctggccccgtg	CRISPR spacer
gccactcaacgaagccatgtctggcccagct	Protospacer
******************.******** *.

15. spacer 2.1|375254|31|NZ_CP048003|CRISPRCasFinder matches to NZ_CP017262 (Lactobacillus paracasei strain FAM18149 plasmid pFAM18149.21, complete sequence) position: , mismatch: 4, identity: 0.871

gccactcaacgaagccatatctggccccgtg	CRISPR spacer
gccactcaacgaagccatgtctggcccagct	Protospacer
******************.******** *.

16. spacer 2.1|375254|31|NZ_CP048003|CRISPRCasFinder matches to NZ_CP035564 (Lactobacillus paracasei strain SRCM103299 plasmid unnamed1) position: , mismatch: 5, identity: 0.839

gccactcaacgaagccatatctggccccgtg	CRISPR spacer
gccacttaacgaagccatgtctggcccagct	Protospacer
******.***********.******** *.

17. spacer 2.1|375254|31|NZ_CP048003|CRISPRCasFinder matches to NZ_CP029537 (Lactobacillus paracasei strain LC355 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.839

gccactcaacgaagccatatctggccccgtg	CRISPR spacer
gccaatcaacgaagccatgtctggcccagct	Protospacer
**** *************.******** *.

18. spacer 2.1|375254|31|NZ_CP048003|CRISPRCasFinder matches to NZ_CP014988 (Lactobacillus paracasei strain IIA plasmid unnamed3, complete sequence) position: , mismatch: 5, identity: 0.839

gccactcaacgaagccatatctggccccgtg	CRISPR spacer
gccaatcaacgaagccatgtctggcccagct	Protospacer
**** *************.******** *.

19. spacer 3.22|1716060|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to MT774393 (CrAssphage cr127_1, complete genome) position: , mismatch: 5, identity: 0.833

cttcatctaatgatgaattaactaacaagt	CRISPR spacer
atgcatctgatgatgaattaactaaaaatt	Protospacer
 * *****.**************** ** *

20. spacer 3.28|1716456|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031268 (Staphylococcus warneri strain 16A plasmid unnamed2) position: , mismatch: 5, identity: 0.833

tcaatataactcgcatcataatcaa--gatta	CRISPR spacer
taaatataacttgcatcgtaatcaaacgat--	Protospacer
* *********.*****.*******  ***

21. spacer 3.30|1716588|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to MK448743 (Streptococcus phage Javan371, complete genome) position: , mismatch: 5, identity: 0.833

---atctcactgatgttatcggcgatttacgag	CRISPR spacer
tagatc---ctgatgttatcggcgattttcgtg	Protospacer
   ***   ******************* ** *

22. spacer 2.1|375254|31|NZ_CP048003|CRISPRCasFinder matches to NZ_CP012188 (Lactobacillus paracasei strain CAUH35 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.806

gccactcaacgaagccatatctggccccgtg	CRISPR spacer
accgctcaacgaagccatatctggaccggca	Protospacer
.**.******************** ** *..

23. spacer 2.1|375254|31|NZ_CP048003|CRISPRCasFinder matches to NZ_CP016356 (Lactobacillus paracasei subsp. paracasei strain TMW 1.1434 plasmid pL11434-1, complete sequence) position: , mismatch: 6, identity: 0.806

gccactcaacgaagccatatctggccccgtg	CRISPR spacer
accgctcaacgaagccatatctggaccagca	Protospacer
.**.******************** ** *..

24. spacer 2.1|375254|31|NZ_CP048003|CRISPRCasFinder matches to NZ_CP035564 (Lactobacillus paracasei strain SRCM103299 plasmid unnamed1) position: , mismatch: 6, identity: 0.806

gccactcaacgaagccatatctggccccgtg	CRISPR spacer
accgctcaacgaagccatatctggaccggca	Protospacer
.**.******************** ** *..

25. spacer 2.1|375254|31|NZ_CP048003|CRISPRCasFinder matches to NZ_CP029547 (Lactobacillus paracasei strain EG9 plasmid pEG9A, complete sequence) position: , mismatch: 6, identity: 0.806

gccactcaacgaagccatatctggccccgtg	CRISPR spacer
accgctcaacgaagccatatctggaccggca	Protospacer
.**.******************** ** *..

26. spacer 2.1|375254|31|NZ_CP048003|CRISPRCasFinder matches to NZ_CP029537 (Lactobacillus paracasei strain LC355 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.806

gccactcaacgaagccatatctggccccgtg	CRISPR spacer
accgctcaacgaagccatatctggaccggca	Protospacer
.**.******************** ** *..

27. spacer 2.1|375254|31|NZ_CP048003|CRISPRCasFinder matches to NZ_CP014988 (Lactobacillus paracasei strain IIA plasmid unnamed3, complete sequence) position: , mismatch: 6, identity: 0.806

gccactcaacgaagccatatctggccccgtg	CRISPR spacer
accgctcaacgaagccatatctggaccggca	Protospacer
.**.******************** ** *..

28. spacer 3.11|1715334|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040339 (Bacillus luti strain FJ plasmid unnamed3, complete sequence) position: , mismatch: 6, identity: 0.8

tcaaatagcctcttcgaaagttaaaggagg	CRISPR spacer
tcagtcagcatcttcgaaagttaaaggatt	Protospacer
***. .*** ******************

29. spacer 3.22|1716060|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039224 (Piscirickettsia salmonis strain NVI 5692 plasmid unnamed5, complete sequence) position: , mismatch: 6, identity: 0.8

cttcatctaatgatgaattaactaacaagt	CRISPR spacer
atttatcaaatgatgaattaactagctaat	Protospacer
 **.*** ****************.* *.*

30. spacer 2.1|375254|31|NZ_CP048003|CRISPRCasFinder matches to NZ_LR134465 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 23, complete sequence) position: , mismatch: 7, identity: 0.774

---gccactcaacgaagccatatctggccccgtg	CRISPR spacer
aaaggcgc---acgaagccagatctggcctcgtg	Protospacer
   * *.*   ********* ********.****

31. spacer 3.3|1714806|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040459 (Pseudomonas stutzeri strain PheN2 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

cagtagcaacataaaccctagtaccaataa	CRISPR spacer
ccctagcaacatcaacgctagtaccaccac	Protospacer
*  ********* *** ********* .*

32. spacer 3.9|1715202|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to MN176219 (Bacillus phage 000TH010, complete genome) position: , mismatch: 7, identity: 0.767

cgaatttaagacgatgaaactgccgtatgg	CRISPR spacer
ctcattaaagacgatgaaacagccgttttt	Protospacer
*  *** ************* ***** *

33. spacer 3.15|1715598|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010135 (Escherichia coli strain D1 plasmid A, complete genome) position: , mismatch: 7, identity: 0.767

cgcctgaacattgcatcgatggtttgatca	CRISPR spacer
gtgtcgaacatttcatcgacggtttgatca	Protospacer
   ..******* ******.**********

34. spacer 3.15|1715598|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 7, identity: 0.767

cgcctgaacattgcatcgatggtttgatca	CRISPR spacer
gtgtcgaacatttcatcgacggtttgatca	Protospacer
   ..******* ******.**********

35. spacer 3.16|1715664|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016462 (Blastomonas sp. RAC04 plasmid pBSY18_1, complete sequence) position: , mismatch: 7, identity: 0.767

gttggtggcagcgattcattgctgacgtcc	CRISPR spacer
gttggtggcagcgatgcatggctgatcatt	Protospacer
*************** *** *****.  ..

36. spacer 3.18|1715796|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034186 (Deinococcus sp. S14-83 strain S14-83T plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.767

acgtcgccgcgaattttccgcattaccgta	CRISPR spacer
tcgttgccgcgaattttccgcatctcggct	Protospacer
 ***.******************. * *.

37. spacer 3.18|1715796|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to NC_019313 (Sinorhizobium meliloti plasmid pHRC017, complete sequence) position: , mismatch: 7, identity: 0.767

acgtcgccgcgaattttccgcattaccgta	CRISPR spacer
ttgtcgccgcgaatcttccgcatctccctt	Protospacer
 .************.********. ** *

38. spacer 3.21|1715994|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045273 (Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence) position: , mismatch: 7, identity: 0.767

ttgagttctgattgttagttgtatcttggt	CRISPR spacer
ttgagtgctgattgttaattgtatagctat	Protospacer
****** **********.******  . .*

39. spacer 3.21|1715994|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to MT601272 (Bacillus phage vB_BsuS-Goe11, complete genome) position: , mismatch: 7, identity: 0.767

ttgagttctgattgttagttgtatcttggt	CRISPR spacer
ttgagttctgattgtttgatgtattccctt	Protospacer
**************** * *****...  *

40. spacer 3.21|1715994|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to MT366947 (Bacillus phage Hyb2phi3Ts-SPbeta, complete genome) position: , mismatch: 7, identity: 0.767

ttgagttctgattgttagttgtatcttggt	CRISPR spacer
atgagttctgattgtttgatgtatttcctt	Protospacer
 *************** * *****.*.  *

41. spacer 3.21|1715994|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to KY030782 (Bacillus phage phi3T, complete genome) position: , mismatch: 7, identity: 0.767

ttgagttctgattgttagttgtatcttggt	CRISPR spacer
atgagttctgattgtttgatgtatttcctt	Protospacer
 *************** * *****.*.  *

42. spacer 3.21|1715994|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to MT366948 (Bacillus phage Hyb3phi3Ts-SPbeta, complete genome) position: , mismatch: 7, identity: 0.767

ttgagttctgattgttagttgtatcttggt	CRISPR spacer
atgagttctgattgtttgatgtatttcctt	Protospacer
 *************** * *****.*.  *

43. spacer 3.21|1715994|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to MT366945 (Bacillus phage phi3Ts, complete genome) position: , mismatch: 7, identity: 0.767

ttgagttctgattgttagttgtatcttggt	CRISPR spacer
atgagttctgattgtttgatgtatttcctt	Protospacer
 *************** * *****.*.  *

44. spacer 3.22|1716060|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to JN638751 (Bacillus phage G, complete genome) position: , mismatch: 7, identity: 0.767

cttcatctaatgatgaattaactaacaagt	CRISPR spacer
agtattctactgatgaattaactaacactt	Protospacer
  *  **** *****************  *

45. spacer 3.25|1716258|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to NC_010553 (Burkholderia ambifaria MC40-6 plasmid pBMC401, complete sequence) position: , mismatch: 7, identity: 0.767

catcgtaccctcacaaaagctaacgccggc	CRISPR spacer
cttggtaccctcacaaaagctaccgacacg	Protospacer
* * ****************** ** *.

46. spacer 3.25|1716258|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to NC_010553 (Burkholderia ambifaria MC40-6 plasmid pBMC401, complete sequence) position: , mismatch: 7, identity: 0.767

catcgtaccctcacaaaagctaacgccggc	CRISPR spacer
cttggtaccctcacaaaagctaccgacacg	Protospacer
* * ****************** ** *.

47. spacer 3.40|1717248|30|NZ_CP048003|CRISPRCasFinder,CRT matches to NZ_AP018520 (Sphingobium sp. YG1 plasmid pYGP1, complete sequence) position: , mismatch: 7, identity: 0.767

aggaaattcgagttcttcccgcaattgatg	CRISPR spacer
tcaaaattcgagttcgtcccgcaagaaatg	Protospacer
  .************ ********  .***

48. spacer 3.13|1715466|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028945 (Vibrio sp. dhg plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

aaaaattggggattggcaagattacgactg	CRISPR spacer
tcgaaatgaggattggcaagattacgatga	Protospacer
  .** **.******************. .

49. spacer 3.21|1715994|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045273 (Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence) position: , mismatch: 8, identity: 0.733

ttgagttctgattgttagttgtatcttggt	CRISPR spacer
ttgagtgctgattgttaattgtatagctac	Protospacer
****** **********.******  . ..

50. spacer 3.21|1715994|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045273 (Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence) position: , mismatch: 8, identity: 0.733

ttgagttctgattgttagttgtatcttggt	CRISPR spacer
ttgagtgctgattgttaattgtatagctac	Protospacer
****** **********.******  . ..

51. spacer 3.21|1715994|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045273 (Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence) position: , mismatch: 8, identity: 0.733

ttgagttctgattgttagttgtatcttggt	CRISPR spacer
ttgagtgctgattgttaattgtatagctac	Protospacer
****** **********.******  . ..

52. spacer 3.21|1715994|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045273 (Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence) position: , mismatch: 8, identity: 0.733

ttgagttctgattgttagttgtatcttggt	CRISPR spacer
ttgagtgctgattgttaattgtatagctac	Protospacer
****** **********.******  . ..

53. spacer 3.21|1715994|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to KJ019135 (Synechococcus phage ACG-2014a isolate Syn7803C101, complete genome) position: , mismatch: 8, identity: 0.733

ttgagttctgattgttagttgtatcttggt	CRISPR spacer
atgagttctgaatattagttgtataaggtc	Protospacer
 ********** *.**********   * .

54. spacer 3.21|1715994|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to KJ019114 (Synechococcus phage ACG-2014a isolate Syn7803US60, complete genome) position: , mismatch: 8, identity: 0.733

ttgagttctgattgttagttgtatcttggt	CRISPR spacer
atgagttctgaatattagttgtataaggtc	Protospacer
 ********** *.**********   * .

55. spacer 3.21|1715994|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to KJ019138 (Synechococcus phage ACG-2014a isolate Syn7803C107, complete genome) position: , mismatch: 8, identity: 0.733

ttgagttctgattgttagttgtatcttggt	CRISPR spacer
atgagttctgaatattagttgtataaggtc	Protospacer
 ********** *.**********   * .

56. spacer 3.21|1715994|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to KJ019122 (Synechococcus phage ACG-2014a isolate Syn7803US79, complete genome) position: , mismatch: 8, identity: 0.733

ttgagttctgattgttagttgtatcttggt	CRISPR spacer
atgagttctgaatattagttgtataaggtc	Protospacer
 ********** *.**********   * .

57. spacer 3.21|1715994|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to KJ019055 (Synechococcus phage ACG-2014a isolate Syn7803C86, complete genome) position: , mismatch: 8, identity: 0.733

ttgagttctgattgttagttgtatcttggt	CRISPR spacer
atgagttctgaatattagttgtataaggtc	Protospacer
 ********** *.**********   * .

58. spacer 3.21|1715994|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to KJ019038 (Synechococcus phage ACG-2014a isolate Syn7803C59, complete genome) position: , mismatch: 8, identity: 0.733

ttgagttctgattgttagttgtatcttggt	CRISPR spacer
atgagttctgaatattagttgtataaggtc	Protospacer
 ********** *.**********   * .

59. spacer 3.21|1715994|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to KJ019068 (Synechococcus phage ACG-2014a isolate Syn7803US102, complete genome) position: , mismatch: 8, identity: 0.733

ttgagttctgattgttagttgtatcttggt	CRISPR spacer
atgagttctgaatattagttgtataaggtc	Protospacer
 ********** *.**********   * .

60. spacer 3.21|1715994|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to KJ019137 (Synechococcus phage ACG-2014a isolate Syn7803C104, complete genome) position: , mismatch: 8, identity: 0.733

ttgagttctgattgttagttgtatcttggt	CRISPR spacer
atgagttctgaatattagttgtataaggtc	Protospacer
 ********** *.**********   * .

61. spacer 3.21|1715994|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to KJ019157 (Synechococcus phage ACG-2014a isolate Syn7803C31, complete genome) position: , mismatch: 8, identity: 0.733

ttgagttctgattgttagttgtatcttggt	CRISPR spacer
atgagttctgaatattagttgtataaggtc	Protospacer
 ********** *.**********   * .

62. spacer 3.21|1715994|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to KJ019087 (Synechococcus phage ACG-2014a isolate Syn7803US19, complete genome) position: , mismatch: 8, identity: 0.733

ttgagttctgattgttagttgtatcttggt	CRISPR spacer
atgagttctgaatattagttgtataaggtc	Protospacer
 ********** *.**********   * .

63. spacer 3.21|1715994|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to KJ019076 (Synechococcus phage ACG-2014a isolate Syn7803US112, complete genome) position: , mismatch: 8, identity: 0.733

ttgagttctgattgttagttgtatcttggt	CRISPR spacer
atgagttctgaatattagttgtataaggtc	Protospacer
 ********** *.**********   * .

64. spacer 3.21|1715994|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to KJ019065 (Synechococcus phage ACG-2014a isolate Syn7803C99, complete genome) position: , mismatch: 8, identity: 0.733

ttgagttctgattgttagttgtatcttggt	CRISPR spacer
atgagttctgaatattagttgtataaggtc	Protospacer
 ********** *.**********   * .

65. spacer 3.21|1715994|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to KJ019026 (Synechococcus phage ACG-2014a isolate Syn7803C42, complete genome) position: , mismatch: 8, identity: 0.733

ttgagttctgattgttagttgtatcttggt	CRISPR spacer
atgagttctgaatattagttgtataaggtc	Protospacer
 ********** *.**********   * .

66. spacer 3.21|1715994|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to KJ019081 (Synechococcus phage ACG-2014a isolate Syn7803US117, complete genome) position: , mismatch: 8, identity: 0.733

ttgagttctgattgttagttgtatcttggt	CRISPR spacer
atgagttctgaatattagttgtataaggtc	Protospacer
 ********** *.**********   * .

67. spacer 3.21|1715994|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to KJ019033 (Synechococcus phage ACG-2014a isolate Syn7803C53, complete genome) position: , mismatch: 8, identity: 0.733

ttgagttctgattgttagttgtatcttggt	CRISPR spacer
atgagttctgaatattagttgtataaggtc	Protospacer
 ********** *.**********   * .

68. spacer 3.21|1715994|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to NC_023584 (Synechococcus phage S-MbCM100, complete genome) position: , mismatch: 8, identity: 0.733

ttgagttctgattgttagttgtatcttggt	CRISPR spacer
atgagttctgaatattagttgtataaggtc	Protospacer
 ********** *.**********   * .

69. spacer 3.21|1715994|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to KJ019153 (Synechococcus phage ACG-2014a isolate Syn7803C26, complete genome) position: , mismatch: 8, identity: 0.733

ttgagttctgattgttagttgtatcttggt	CRISPR spacer
atgagttctgaatattagttgtataaggtc	Protospacer
 ********** *.**********   * .

70. spacer 3.21|1715994|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to KJ019158 (Synechococcus phage ACG-2014a isolate Syn7803C33, complete genome) position: , mismatch: 8, identity: 0.733

ttgagttctgattgttagttgtatcttggt	CRISPR spacer
atgagttctgaatattagttgtataaggtc	Protospacer
 ********** *.**********   * .

71. spacer 3.21|1715994|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to KJ019067 (Synechococcus phage ACG-2014a isolate Syn7803US101, complete genome) position: , mismatch: 8, identity: 0.733

ttgagttctgattgttagttgtatcttggt	CRISPR spacer
atgagttctgaatattagttgtataaggtc	Protospacer
 ********** *.**********   * .

72. spacer 3.21|1715994|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to KJ019039 (Synechococcus phage ACG-2014a isolate Syn7803C60, complete genome) position: , mismatch: 8, identity: 0.733

ttgagttctgattgttagttgtatcttggt	CRISPR spacer
atgagttctgaatattagttgtataaggtc	Protospacer
 ********** *.**********   * .

73. spacer 3.21|1715994|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to KJ019030 (Synechococcus phage ACG-2014a isolate Syn7803C47, complete genome) position: , mismatch: 8, identity: 0.733

ttgagttctgattgttagttgtatcttggt	CRISPR spacer
atgagttctgaatattagttgtataaggtc	Protospacer
 ********** *.**********   * .

74. spacer 3.21|1715994|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to KJ019163 (Synechococcus phage ACG-2014a isolate Syn7803C38, complete genome) position: , mismatch: 8, identity: 0.733

ttgagttctgattgttagttgtatcttggt	CRISPR spacer
atgagttctgaatattagttgtataaggtc	Protospacer
 ********** *.**********   * .

75. spacer 3.21|1715994|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to KJ019116 (Synechococcus phage ACG-2014a isolate Syn7803US62, complete genome) position: , mismatch: 8, identity: 0.733

ttgagttctgattgttagttgtatcttggt	CRISPR spacer
atgagttctgaatattagttgtataaggtc	Protospacer
 ********** *.**********   * .

76. spacer 3.21|1715994|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to KJ019088 (Synechococcus phage ACG-2014a isolate Syn7803US1, complete genome) position: , mismatch: 8, identity: 0.733

ttgagttctgattgttagttgtatcttggt	CRISPR spacer
atgagttctgaatattagttgtataaggtc	Protospacer
 ********** *.**********   * .

77. spacer 3.21|1715994|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to KJ019084 (Synechococcus phage ACG-2014a isolate Syn7803US123, complete genome) position: , mismatch: 8, identity: 0.733

ttgagttctgattgttagttgtatcttggt	CRISPR spacer
atgagttctgaatattagttgtataaggtc	Protospacer
 ********** *.**********   * .

78. spacer 3.29|1716522|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to KP671755 (Vibrio phage ValKK3, complete genome) position: , mismatch: 8, identity: 0.733

aaggtgagcaaatctttgatgttagtcagc	CRISPR spacer
gggaaaagaaaatctttgattttagtcagt	Protospacer
..*. .** *********** ********.

79. spacer 3.29|1716522|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to MH321493 (Salmonella phage Skate, complete genome) position: , mismatch: 8, identity: 0.733

aaggtgagcaaatctttgatgttagtcagc	CRISPR spacer
taatgcagcgaatctttgatgtaagtcagg	Protospacer
 *.   ***.************ ******

80. spacer 3.29|1716522|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to KY860935 (Salmonella phage LPST10, complete genome) position: , mismatch: 8, identity: 0.733

aaggtgagcaaatctttgatgttagtcagc	CRISPR spacer
taatgcagcgaatctttgatgtaagtcagg	Protospacer
 *.   ***.************ ******

81. spacer 3.29|1716522|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to MN871490 (UNVERIFIED: Salmonella phage SEzh_1, complete genome) position: , mismatch: 8, identity: 0.733

aaggtgagcaaatctttgatgttagtcagc	CRISPR spacer
taatgcagcgaatctttgatgtaagtcagg	Protospacer
 *.   ***.************ ******

82. spacer 3.29|1716522|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to KT919972 (Vibrio phage phi-Grn1, complete genome) position: , mismatch: 8, identity: 0.733

aaggtgagcaaatctttgatgttagtcagc	CRISPR spacer
gggaaaagaaaatctttgattttagtcagt	Protospacer
..*. .** *********** ********.

83. spacer 3.29|1716522|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to MN692673 (Salmonella phage VB_StyS_BS5, complete genome) position: , mismatch: 8, identity: 0.733

aaggtgagcaaatctttgatgttagtcagc	CRISPR spacer
taatgcagcgaatctttgatgtaagtcagg	Protospacer
 *.   ***.************ ******

84. spacer 3.29|1716522|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to MH791402 (UNVERIFIED: Salmonella phage Segz_1, complete genome) position: , mismatch: 8, identity: 0.733

aaggtgagcaaatctttgatgttagtcagc	CRISPR spacer
taatgcagcgaatctttgatgtaagtcagg	Protospacer
 *.   ***.************ ******

85. spacer 3.35|1716918|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032828 (Sphingomonas sp. YZ-8 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

cttacgtcaacggttataccgtgcgcaagg	CRISPR spacer
gcctcggcaacggttataccgtgcccaaca	Protospacer
 .. ** ***************** *** .

86. spacer 3.35|1716918|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041205 (Rhizobium sp. NIBRBAC000502774 plasmid pMK-2, complete sequence) position: , mismatch: 8, identity: 0.733

cttacgtcaacggttataccgtgcgcaagg	CRISPR spacer
tcaatcccaacggctatatcgtgcgcaagg	Protospacer
.. *. .******.****.***********

87. spacer 3.35|1716918|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to NC_015184 (Agrobacterium sp. H13-3 plasmid pAspH13-3a, complete sequence) position: , mismatch: 8, identity: 0.733

cttacgtcaacggttataccgtgcgcaagg	CRISPR spacer
tcaatcccaacggctatatcgtgcgcaagg	Protospacer
.. *. .******.****.***********

88. spacer 3.35|1716918|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to CP047390 (Agrobacterium sp. CGMCC 11546 plasmid pB) position: , mismatch: 8, identity: 0.733

cttacgtcaacggttataccgtgcgcaagg	CRISPR spacer
tcaatcccaacggctatatcgtgcgcaagg	Protospacer
.. *. .******.****.***********

89. spacer 3.35|1716918|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033036 (Agrobacterium fabrum strain 12D13 plasmid pAt12D13a, complete sequence) position: , mismatch: 8, identity: 0.733

cttacgtcaacggttataccgtgcgcaagg	CRISPR spacer
tcaatcccaacggctatatcgtgcgcaagg	Protospacer
.. *. .******.****.***********

90. spacer 3.35|1716918|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to NC_003064 (Agrobacterium fabrum str. C58 plasmid At, complete sequence) position: , mismatch: 8, identity: 0.733

cttacgtcaacggttataccgtgcgcaagg	CRISPR spacer
tcaatcccaacggctatatcgtgcgcaagg	Protospacer
.. *. .******.****.***********

91. spacer 3.35|1716918|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032919 (Agrobacterium tumefaciens strain 15955 plasmid pAt15955, complete sequence) position: , mismatch: 8, identity: 0.733

cttacgtcaacggttataccgtgcgcaagg	CRISPR spacer
tcaatcccaacggctatatcgtgcgcaagg	Protospacer
.. *. .******.****.***********

92. spacer 3.35|1716918|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033029 (Agrobacterium tumefaciens strain A6 plasmid pAtA6, complete sequence) position: , mismatch: 8, identity: 0.733

cttacgtcaacggttataccgtgcgcaagg	CRISPR spacer
tcaatcccaacggctatatcgtgcgcaagg	Protospacer
.. *. .******.****.***********

93. spacer 3.6|1715004|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053977 (Bacillus thuringiensis strain FDAARGOS_795 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

ccgaaggataagccaatatttgtaccagac	CRISPR spacer
agtaaggataagtcaatatttgtagtacca	Protospacer
   *********.*********** .*

94. spacer 3.6|1715004|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034684 (Bacillus sp. BD59S plasmid pBTBD59S1, complete sequence) position: , mismatch: 9, identity: 0.7

ccgaaggataagccaatatttgtaccagac	CRISPR spacer
agtaaggataagtcaatatttgtagtacca	Protospacer
   *********.*********** .*

95. spacer 3.6|1715004|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009332 (Bacillus thuringiensis strain HD1011 plasmid 3, complete sequence) position: , mismatch: 9, identity: 0.7

ccgaaggataagccaatatttgtaccagac	CRISPR spacer
agtaaggataagtcaatatttgtagtacca	Protospacer
   *********.*********** .*

96. spacer 3.15|1715598|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to MN961670 (Pseudomonas putida strain 420352 plasmid p420352-IMP, complete sequence) position: , mismatch: 9, identity: 0.7

cgcctgaacattgcatcgatggtttgatca	CRISPR spacer
atggtgaacattgcttcgatggtttctcaa	Protospacer
    ********** **********  . *

97. spacer 3.16|1715664|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026804 (Shigella flexneri strain 89-141 plasmid unnamed1) position: , mismatch: 9, identity: 0.7

gttggtggcagcgattcattgctgacgtcc	CRISPR spacer
tcgggtagcagcgattcattactgacagat	Protospacer
 . ***.*************.*****.  .

98. spacer 3.16|1715664|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026794 (Shigella flexneri strain 74-1170 plasmid unnamed) position: , mismatch: 9, identity: 0.7

gttggtggcagcgattcattgctgacgtcc	CRISPR spacer
tcgggtagcagcgattcattactgacagat	Protospacer
 . ***.*************.*****.  .

99. spacer 3.16|1715664|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026794 (Shigella flexneri strain 74-1170 plasmid unnamed) position: , mismatch: 9, identity: 0.7

gttggtggcagcgattcattgctgacgtcc	CRISPR spacer
tcgggtagcagcgattcattactgacagat	Protospacer
 . ***.*************.*****.  .

100. spacer 3.16|1715664|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033511 (Shigella flexneri strain 2016AM-0877 plasmid p2016AM-0877, complete sequence) position: , mismatch: 9, identity: 0.7

gttggtggcagcgattcattgctgacgtcc	CRISPR spacer
tcgggtagcagcgattcattactgacagat	Protospacer
 . ***.*************.*****.  .

101. spacer 3.16|1715664|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026789 (Shigella flexneri 2a strain ATCC 29903 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

gttggtggcagcgattcattgctgacgtcc	CRISPR spacer
tcgggtagcagcgattcattactgacagat	Protospacer
 . ***.*************.*****.  .

102. spacer 3.16|1715664|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034059 (Shigella flexneri strain FDAARGOS_535 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

gttggtggcagcgattcattgctgacgtcc	CRISPR spacer
tcgggtagcagcgattcattactgacagat	Protospacer
 . ***.*************.*****.  .

103. spacer 3.16|1715664|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024476 (Shigella flexneri 7b strain 94-3007 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.7

gttggtggcagcgattcattgctgacgtcc	CRISPR spacer
tcgggtagcagcgattcattactgacagat	Protospacer
 . ***.*************.*****.  .

104. spacer 3.16|1715664|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR213456 (Shigella flexneri strain AUSMDU00008332 isolate AUSMDU00008332 plasmid 2) position: , mismatch: 9, identity: 0.7

gttggtggcagcgattcattgctgacgtcc	CRISPR spacer
tcgggtagcagcgattcattactgacagat	Protospacer
 . ***.*************.*****.  .

105. spacer 3.16|1715664|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026771 (Shigella flexneri Y strain 93-3063 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.7

gttggtggcagcgattcattgctgacgtcc	CRISPR spacer
tcgggtagcagcgattcattactgacagat	Protospacer
 . ***.*************.*****.  .

106. spacer 3.16|1715664|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044157 (Shigella flexneri strain AR-0424 plasmid pAR-0424-2, complete sequence) position: , mismatch: 9, identity: 0.7

gttggtggcagcgattcattgctgacgtcc	CRISPR spacer
tcgggtagcagcgattcattactgacagat	Protospacer
 . ***.*************.*****.  .

107. spacer 3.16|1715664|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026837 (Shigella boydii strain ATCC 49812 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.7

gttggtggcagcgattcattgctgacgtcc	CRISPR spacer
tcgggtagcagcgattcattactgacagat	Protospacer
 . ***.*************.*****.  .

108. spacer 3.16|1715664|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to NC_017319 (Shigella flexneri 2002017 plasmid pSFxv_1, complete sequence) position: , mismatch: 9, identity: 0.7

gttggtggcagcgattcattgctgacgtcc	CRISPR spacer
tcgggtagcagcgattcattactgacagat	Protospacer
 . ***.*************.*****.  .

109. spacer 3.16|1715664|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012142 (Shigella flexneri 4c strain 1205 plasmid 1205p2, complete sequence) position: , mismatch: 9, identity: 0.7

gttggtggcagcgattcattgctgacgtcc	CRISPR spacer
tcgggtagcagcgattcattactgacagat	Protospacer
 . ***.*************.*****.  .

110. spacer 3.16|1715664|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044154 (Shigella flexneri strain AR-0425 plasmid pAR-0425-2, complete sequence) position: , mismatch: 9, identity: 0.7

gttggtggcagcgattcattgctgacgtcc	CRISPR spacer
tcgggtagcagcgattcattactgacagat	Protospacer
 . ***.*************.*****.  .

111. spacer 3.16|1715664|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034933 (Shigella flexneri strain 2013C-3749 plasmid p2013C-3749-2, complete sequence) position: , mismatch: 9, identity: 0.7

gttggtggcagcgattcattgctgacgtcc	CRISPR spacer
tcgggtagcagcgattcattactgacagat	Protospacer
 . ***.*************.*****.  .

112. spacer 3.16|1715664|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP037924 (Shigella flexneri 5a str. M90T plasmid pWR100, complete sequence) position: , mismatch: 9, identity: 0.7

gttggtggcagcgattcattgctgacgtcc	CRISPR spacer
tcgggtagcagcgattcattactgacagat	Protospacer
 . ***.*************.*****.  .

113. spacer 3.16|1715664|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026800 (Shigella flexneri strain NCTC 9728 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.7

gttggtggcagcgattcattgctgacgtcc	CRISPR spacer
tcgggtagcagcgattcattactgacagat	Protospacer
 . ***.*************.*****.  .

114. spacer 3.16|1715664|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to NC_002698 (Shigella flexneri 5a virulence plasmid pWR501, complete sequence) position: , mismatch: 9, identity: 0.7

gttggtggcagcgattcattgctgacgtcc	CRISPR spacer
tcgggtagcagcgattcattactgacagat	Protospacer
 . ***.*************.*****.  .

115. spacer 3.16|1715664|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030773 (Shigella flexneri 1c strain Y394 plasmid pINV-Y394, complete sequence) position: , mismatch: 9, identity: 0.7

gttggtggcagcgattcattgctgacgtcc	CRISPR spacer
tcgggtagcagcgattcattactgacagat	Protospacer
 . ***.*************.*****.  .

116. spacer 3.16|1715664|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020087 (Shigella flexneri 1a strain 0670 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

gttggtggcagcgattcattgctgacgtcc	CRISPR spacer
tcgggtagcagcgattcattactgacagat	Protospacer
 . ***.*************.*****.  .

117. spacer 3.16|1715664|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020337 (Shigella flexneri 4c strain 1602 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

gttggtggcagcgattcattgctgacgtcc	CRISPR spacer
tcgggtagcagcgattcattactgacagat	Protospacer
 . ***.*************.*****.  .

118. spacer 3.16|1715664|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to NC_019197 (Shigella flexneri plasmid pSF5, complete sequence) position: , mismatch: 9, identity: 0.7

gttggtggcagcgattcattgctgacgtcc	CRISPR spacer
tcgggtagcagcgattcattactgacagat	Protospacer
 . ***.*************.*****.  .

119. spacer 3.16|1715664|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045942 (Shigella flexneri 2a strain AUSMDU00010535 plasmid pAUSMDU00010535_01, complete sequence) position: , mismatch: 9, identity: 0.7

gttggtggcagcgattcattgctgacgtcc	CRISPR spacer
tcgggtagcagcgattcattactgacagat	Protospacer
 . ***.*************.*****.  .

120. spacer 3.16|1715664|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to NC_004851 (Shigella flexneri 2a str. 301 plasmid pCP301, complete sequence) position: , mismatch: 9, identity: 0.7

gttggtggcagcgattcattgctgacgtcc	CRISPR spacer
tcgggtagcagcgattcattactgacagat	Protospacer
 . ***.*************.*****.  .

121. spacer 3.16|1715664|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026830 (Shigella dysenteriae strain ATCC 12039 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.7

gttggtggcagcgattcattgctgacgtcc	CRISPR spacer
tcgggtagcagcgattcattactgacagat	Protospacer
 . ***.*************.*****.  .

122. spacer 3.22|1716060|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031220 (Arcobacter mytili LMG 24559 plasmid pAMYT, complete sequence) position: , mismatch: 9, identity: 0.7

cttcatctaatgatgaattaactaacaagt	CRISPR spacer
aactatctaataatgaattaactaatgaag	Protospacer
  ..*******.*************..*.

123. spacer 3.22|1716060|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to NC_049481 (Lactococcus phage CHPC361, complete genome) position: , mismatch: 9, identity: 0.7

cttcatctaatgatgaattaactaacaagt	CRISPR spacer
cttcatctaatgatgaatcatcttctttta	Protospacer
******************.* **  .

124. spacer 3.27|1716390|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021449 (Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence) position: , mismatch: 9, identity: 0.7

tcttcaaggtcttgtgtggcaatagcgttt	CRISPR spacer
agctcaaggtcttgtctggcaatacggcgg	Protospacer
  .************ ********  *.

125. spacer 3.37|1717050|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to NZ_HG938354 (Neorhizobium galegae bv. orientalis str. HAMBI 540 plasmid pHAMBI540a, complete sequence) position: , mismatch: 9, identity: 0.7

aaaggcttacgttcaggcgattgaatccgg	CRISPR spacer
ttgggcttgcgttcaggcggttgaatttcc	Protospacer
  .*****.**********.******..

126. spacer 3.22|1716060|30|NZ_CP048003|PILER-CR,CRISPRCasFinder,CRT matches to MF448569 (Lactococcus phage 88605, complete genome) position: , mismatch: 10, identity: 0.667

cttcatctaatgatgaattaactaacaagt	CRISPR spacer
tctcatctaatgatgaattatcttctgttg	Protospacer
..****************** **  ..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

470 : 16345

Lactobacillus_phage(90.0%)

integrase

attL 8876:8889|attR 23523:23536

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032769583.1\|470_845_-	hypothetical protein	A0A1B0YE76	Lactobacillus_phage	3.4e-60	97.6
WP_016382027.1\|913_1294_-	hypothetical protein	A0A0P0HRY0	Lactobacillus_phage	2.4e-69	96.8
WP_016372310.1\|1898_2270_-	ASCH domain-containing protein	Q938L5	Temperate_phage	5.1e-24	43.6
WP_016382029.1\|2247_3315_-	hypothetical protein	Q6SE88	Lactobacillus_prophage	2.2e-72	41.5
WP_016382030.1\|4185_4620_-	autolysin regulatory protein ArpU	B4XYT9	Lactobacillus_phage	1.1e-51	74.1
WP_016382031.1\|4872_5091_-	helix-turn-helix transcriptional regulator	A0A0P0IXA5	Lactobacillus_phage	1.0e-32	98.6
WP_016382032.1\|5112_5322_-	hypothetical protein	A0A2D1GPJ8	Lactobacillus_phage	1.1e-28	85.5
WP_016372087.1\|5920_6352_+	hypothetical protein	NA	NA	NA	NA
WP_022671500.1\|6376_6895_-	DNA polymerase III subunit epsilon	NA	NA	NA	NA
WP_107791792.1\|6894_7719_-	ATP-binding protein	A0A0P0I3L9	Lactobacillus_phage	3.0e-117	75.5
WP_016382216.1\|7733_8483_-	DnaD domain protein	A0A0N7IRA7	Lactobacillus_phage	1.5e-35	56.1
WP_016382215.1\|8475_8790_-	hypothetical protein	NA	NA	NA	NA
8876:8889	attL	NA	NA	NA	NA
WP_003657835.1\|9154_9379_-	DUF771 domain-containing protein	A0A0P0IQT9	Lactobacillus_phage	2.6e-39	100.0
WP_003593164.1\|9487_9700_-	hypothetical protein	A0A0N7IRA6	Lactobacillus_phage	1.7e-29	98.6
WP_016382214.1\|9707_10430_-	Rha family transcriptional regulator	A0A0P0IDD0	Lactobacillus_phage	6.9e-126	99.2
WP_003578190.1\|10426_10624_-	hypothetical protein	A0A0P0IK60	Lactobacillus_phage	5.2e-28	100.0
WP_016364605.1\|10897_11227_+	helix-turn-helix transcriptional regulator	A0A1B0Y3N1	Lactobacillus_phage	1.1e-09	33.0
WP_003598062.1\|11228_11639_+	hypothetical protein	NA	NA	NA	NA
WP_003598061.1\|11652_12417_+	KQT family voltage-gated potassium channel protein	A0A1B0Y2S3	Lactobacillus_phage	9.1e-44	55.5
WP_003598059.1\|12595_12889_+	hypothetical protein	A0A0P0HRW5	Lactobacillus_phage	5.7e-47	100.0
WP_012491228.1\|12892_13375_+	hypothetical protein	A0A0P0IZP3	Lactobacillus_phage	2.1e-83	100.0
WP_003598055.1\|13444_13876_+	hypothetical protein	A0A0P0IJV8	Lactobacillus_phage	6.8e-73	100.0
WP_003598052.1\|14020_15088_+	Abi family protein	A0A0N7IRA5	Lactobacillus_phage	1.1e-207	100.0
WP_016382213.1\|15205_16345_+\|integrase	site-specific integrase	A0A0P0IXL3	Lactobacillus_phage	1.9e-215	98.4
23523:23536	attR	NA	NA	NA	NA

DBSCAN-SWA_2

111755 : 168785

Streptococcus_phage(19.05%)

tail,integrase,terminase,head,portal,capsid,tRNA

attL 130155:130170|attR 175951:175966

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003569308.1\|111755_112898_-\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	2.7e-84	44.0
WP_003563971.1\|113418_114492_-\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
WP_003563969.1\|114799_115816_-	Holliday junction branch migration DNA helicase RuvB	A0A127AWE7	Bacillus_phage	8.2e-08	27.1
WP_003569305.1\|115926_116523_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA
WP_003563965.1\|116615_117212_+	TVP38/TMEM64 family protein	M1Q152	Streptococcus_phage	5.4e-36	43.4
WP_003563944.1\|117316_117790_-	S-ribosylhomocysteine lyase	NA	NA	NA	NA
WP_003569302.1\|117915_119049_-	vitamin B12 independent methionine synthase	A0A218MNE0	uncultured_virus	4.0e-72	42.1
WP_003563937.1\|120009_120663_+	DUF421 domain-containing protein	NA	NA	NA	NA
WP_003569294.1\|120672_121518_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_003569293.1\|121514_122420_-	hypothetical protein	NA	NA	NA	NA
WP_003569291.1\|122680_123505_+	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	7.0e-50	39.4
WP_003569288.1\|123648_124122_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	NA	NA	NA
WP_003563927.1\|124131_125064_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_003563925.1\|125185_125644_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003563923.1\|125731_126400_-	HAD family hydrolase	NA	NA	NA	NA
WP_003574098.1\|126517_127672_-	cation:proton antiporter	NA	NA	NA	NA
WP_003569278.1\|127701_128223_-	histone acetyltransferase	NA	NA	NA	NA
WP_016381761.1\|128490_128838_-	hypothetical protein	NA	NA	NA	NA
WP_003590190.1\|128889_129813_-	proline iminopeptidase-family hydrolase	NA	NA	NA	NA
WP_003569274.1\|129990_132339_+	cation-translocating P-type ATPase	A0A218MNH6	uncultured_virus	1.3e-27	26.1
130155:130170	attL	NA	NA	NA	NA
WP_003569272.1\|132443_132893_+	nucleoside-diphosphate kinase	A0A2K9L595	Tupanvirus	6.1e-16	36.3
WP_003563906.1\|132920_133655_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_003563904.1\|133838_134189_-	hypothetical protein	NA	NA	NA	NA
WP_003569270.1\|134332_136144_+	oligoendopeptidase F	A0A1X9I5X5	Streptococcus_phage	1.0e-125	41.0
WP_003569268.1\|136549_137041_-	flavodoxin	NA	NA	NA	NA
WP_003563894.1\|137314_137812_+	thiol peroxidase	NA	NA	NA	NA
WP_003563892.1\|137856_138843_-	malate permease	NA	NA	NA	NA
WP_003569265.1\|138846_140514_-	NAD-dependent malic enzyme	NA	NA	NA	NA
WP_003569262.1\|140840_141716_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_003569257.1\|141940_142876_-	magnesium transporter CorA family protein	NA	NA	NA	NA
WP_011674263.1\|143085_143436_+	DUF488 family protein	NA	NA	NA	NA
WP_003569255.1\|143443_144004_+	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA
WP_003569252.1\|144098_145007_+	hypothetical protein	NA	NA	NA	NA
WP_003569247.1\|145268_145886_+	flavin reductase family protein	NA	NA	NA	NA
WP_003587414.1\|145908_146856_+	AEC family transporter	NA	NA	NA	NA
WP_003569245.1\|146869_147343_+	hypothetical protein	NA	NA	NA	NA
WP_003563873.1\|147473_148100_-	transcriptional repressor LexA	A0A1B2APZ3	Phage_Wrath	4.9e-11	35.9
WP_003563872.1\|148228_148423_-	hypothetical protein	NA	NA	NA	NA
WP_016381759.1\|148924_150091_+	AI-2E family transporter	NA	NA	NA	NA
WP_003563860.1\|150083_150563_+	hypothetical protein	NA	NA	NA	NA
WP_003569239.1\|150700_151063_-	hypothetical protein	NA	NA	NA	NA
WP_003569237.1\|151314_152337_+	zinc-binding dehydrogenase	NA	NA	NA	NA
WP_003569235.1\|152396_152696_-	hypothetical protein	NA	NA	NA	NA
WP_003563849.1\|152851_153157_+	membrane protein	NA	NA	NA	NA
WP_003569232.1\|153317_153656_+	PadR family transcriptional regulator	NA	NA	NA	NA
WP_003587420.1\|153673_154711_+	hypothetical protein	NA	NA	NA	NA
WP_013245616.1\|155771_156113_-\|head	phage head closure protein	I7AUE6	Enterococcus_phage	1.2e-08	38.4
WP_003586097.1\|156096_156387_-\|head,tail	phage gp6-like head-tail connector protein	NA	NA	NA	NA
WP_016382122.1\|156445_158014_-\|capsid	phage major capsid protein	B8R651	Lactobacillus_phage	2.3e-41	25.8
WP_016382123.1\|158000_159185_-\|portal	phage portal protein	A0A2H4JB06	uncultured_Caudovirales_phage	1.8e-59	34.7
WP_016382124.1\|159189_159369_-	hypothetical protein	NA	NA	NA	NA
WP_016382125.1\|159334_161038_-\|terminase	terminase	A0A2H4JBN3	uncultured_Caudovirales_phage	1.2e-117	41.9
WP_003571972.1\|161034_161505_-\|terminase	phage terminase small subunit P27 family	M1PKP2	Streptococcus_phage	1.9e-07	29.3
WP_050569253.1\|161629_162055_-	HNH endonuclease	D2JLE2	Staphylococcus_phage	1.9e-14	41.4
WP_016382127.1\|162085_162508_-	hypothetical protein	A0A2H4JHE6	uncultured_Caudovirales_phage	1.5e-11	40.2
WP_016382128.1\|162777_164202_-	phage protein	A0A1W6JQD6	Staphylococcus_phage	1.1e-63	37.3
WP_016382129.1\|164194_165022_-	phage protein	Q854C1	Mycobacterium_phage	4.5e-12	32.5
WP_015764281.1\|165005_165194_-	hypothetical protein	NA	NA	NA	NA
WP_016382130.1\|165190_165463_-	hypothetical protein	NA	NA	NA	NA
WP_016382131.1\|165510_165702_-	hypothetical protein	NA	NA	NA	NA
WP_016382133.1\|165812_166223_-	hypothetical protein	NA	NA	NA	NA
WP_016382134.1\|166302_166608_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_101494962.1\|166598_166796_-	helix-turn-helix transcriptional regulator	D7RWM4	Brochothrix_phage	2.4e-09	51.7
WP_080647120.1\|166959_167583_+	helix-turn-helix transcriptional regulator	A0A1P8BMN9	Lactococcus_phage	1.3e-08	45.5
WP_016382137.1\|167633_168785_+\|integrase	site-specific integrase	A0A1S5S7K9	Streptococcus_phage	2.7e-55	34.1
175951:175966	attR	NA	NA	NA	NA

DBSCAN-SWA_3

305662 : 410411

108

Lactobacillus_phage(48.84%)

transposase,integrase,holin

attL 408147:408159|attR 412225:412237

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003574021.1\|305662_306583_+\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	5.3e-22	35.0
WP_060417290.1\|306633_307959_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_003567800.1\|307964_308924_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	8.8e-28	32.9
WP_003585701.1\|308923_310456_-	ABC transporter permease/substrate-binding protein	NA	NA	NA	NA
WP_147658280.1\|310730_311515_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_003581973.1\|313877_315200_+	xyloside transporter XynT	NA	NA	NA	NA
WP_003581971.1\|315307_316078_-	iron export ABC transporter permease subunit FetB	NA	NA	NA	NA
WP_016368446.1\|316074_316725_-	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	4.3e-18	33.8
WP_003581966.1\|316685_316949_-	hypothetical protein	NA	NA	NA	NA
WP_016386656.1\|317502_318186_-\|transposase	IS6 family transposase	A0A0N9RU54	Staphylococcus_phage	1.8e-59	51.3
WP_003582109.1\|318881_320177_+	arsenic transporter	A0A2H4PQU3	Staphylococcus_phage	2.0e-144	61.9
WP_003582108.1\|320213_320549_+	arsenite efflux transporter metallochaperone ArsD	NA	NA	NA	NA
WP_004563097.1\|320571_320988_+	arsenate reductase (thioredoxin)	A0A2H4PQT9	Staphylococcus_phage	3.9e-33	56.9
WP_052915965.1\|321958_322642_+\|transposase	IS6 family transposase	A0A0N9RU54	Staphylococcus_phage	1.5e-58	50.9
WP_003582348.1\|323815_324244_-	hypothetical protein	NA	NA	NA	NA
WP_003582350.1\|324512_325781_-	NADPH-dependent oxidoreductase	A0A2P0ZL82	Lactobacillus_phage	2.2e-50	48.2
WP_003582352.1\|325791_326400_-	NAD(P)H-dependent oxidoreductase	A0A2P0ZL77	Lactobacillus_phage	1.4e-50	52.8
WP_003582354.1\|326546_327464_-	FAD:protein FMN transferase	NA	NA	NA	NA
WP_011674977.1\|327682_328699_+\|transposase	IS30 family transposase	A0A2K9V2S9	Faecalibacterium_phage	2.4e-36	33.4
WP_052915964.1\|328967_329810_-\|transposase	IS3 family transposase	Q6J1X2	Lactobacillus_phage	4.3e-156	98.9
WP_016374491.1\|329989_330115_-\|transposase	IS3 family transposase	Q6J1X3	Lactobacillus_phage	1.4e-15	92.7
WP_016374492.1\|330378_330939_-	hypothetical protein	NA	NA	NA	NA
WP_080988776.1\|331166_332009_-\|transposase	IS3 family transposase	Q6J1X2	Lactobacillus_phage	7.7e-153	97.1
WP_108315962.1\|332062_332341_-\|transposase	transposase	Q6J1X3	Lactobacillus_phage	3.9e-29	94.3
WP_003582565.1\|332554_333022_+	DNA starvation/stationary phase protection protein	A0A222Z0F3	Streptomyces_phage	1.6e-06	29.2
WP_003582569.1\|333316_333667_+	hypothetical protein	NA	NA	NA	NA
WP_003582572.1\|333961_334330_+	YxeA family protein	NA	NA	NA	NA
WP_003601979.1\|334405_335056_+	recombinase family protein	M9Q1K0	Clostridium_phage	1.5e-18	37.6
WP_002819966.1\|335061_335346_+	hypothetical protein	NA	NA	NA	NA
WP_016382271.1\|335375_335885_+	AP2 domain-containing protein	A0A0M7RDN2	Lactobacillus_phage	2.2e-17	36.2
WP_076638850.1\|336083_336299_+	hypothetical protein	NA	NA	NA	NA
WP_016382272.1\|336422_336821_+	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA
WP_123021574.1\|337291_338371_-	class C sortase	NA	NA	NA	NA
WP_031547235.1\|338444_339449_-	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_031547232.1\|339451_340177_-	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_161515581.1\|340169_342857_-	VWA domain-containing protein	NA	NA	NA	NA
WP_014569090.1\|343501_344059_-	hypothetical protein	NA	NA	NA	NA
WP_161515582.1\|344153_345023_-	DUF2075 domain-containing protein	NA	NA	NA	NA
WP_016382194.1\|345097_346885_-	AAA family ATPase	U5PSZ2	Bacillus_phage	2.9e-08	25.9
WP_016382195.1\|346881_348972_-	AAA family ATPase	NA	NA	NA	NA
WP_016382198.1\|351363_352131_+	hypothetical protein	NA	NA	NA	NA
WP_107791775.1\|352474_353396_+\|transposase	IS3 family transposase	Q6J1X2	Lactobacillus_phage	4.7e-103	72.9
WP_016379814.1\|353679_354528_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	1.9e-42	37.1
WP_003582045.1\|355127_355391_-	hypothetical protein	NA	NA	NA	NA
WP_003587111.1\|355450_358273_-	cation-transporting P-type ATPase	M1IAU8	Acanthocystis_turfacea_Chlorella_virus	3.1e-73	27.7
WP_003597616.1\|359376_359736_-	hypothetical protein	NA	NA	NA	NA
WP_076665400.1\|359741_360635_-	endonuclease	NA	NA	NA	NA
WP_016382282.1\|361137_361584_+	hypothetical protein	NA	NA	NA	NA
WP_016382283.1\|361593_361884_+	hypothetical protein	NA	NA	NA	NA
WP_016382284.1\|361897_362347_+	hypothetical protein	NA	NA	NA	NA
WP_016382285.1\|362485_362875_+	hypothetical protein	NA	NA	NA	NA
WP_010493218.1\|363030_363135_-\|holin	putative holin-like toxin	NA	NA	NA	NA
WP_076665402.1\|363287_363476_-	hypothetical protein	NA	NA	NA	NA
WP_016373124.1\|366008_366254_-	hypothetical protein	NA	NA	NA	NA
WP_076665404.1\|366294_367533_-	hypothetical protein	NA	NA	NA	NA
WP_016382049.1\|367525_367963_-	hypothetical protein	NA	NA	NA	NA
WP_003593118.1\|367952_368207_-	hypothetical protein	NA	NA	NA	NA
WP_003587040.1\|368247_368427_-	hypothetical protein	NA	NA	NA	NA
WP_016382050.1\|369029_369851_-	hypothetical protein	NA	NA	NA	NA
WP_016382051.1\|369840_370248_-	thioredoxin family protein	NA	NA	NA	NA
WP_016382052.1\|370244_370889_-	hypothetical protein	NA	NA	NA	NA
WP_016382053.1\|370904_371915_-	peptidase M23	A0A1X9SGZ2	Bradyrhizobium_phage	1.4e-15	38.6
WP_003589979.1\|371916_373845_-	type IV secretory pathway, VirB4 protein	NA	NA	NA	NA
WP_016381677.1\|373825_374422_-	hypothetical protein	NA	NA	NA	NA
WP_016382054.1\|374405_374741_-	hypothetical protein	NA	NA	NA	NA
WP_016382055.1\|374746_376744_-	hypothetical protein	NA	NA	NA	NA
WP_016382056.1\|376740_379197_-	type IV secretory system conjugative DNA transfer family protein	NA	NA	NA	NA
WP_016382057.1\|379223_379802_-	hypothetical protein	NA	NA	NA	NA
WP_012491056.1\|379810_380230_-	single-stranded DNA-binding protein	NA	NA	NA	NA
WP_016382058.1\|380239_381799_-	DUF5011 domain-containing protein	NA	NA	NA	NA
WP_016382059.1\|381776_383018_-	hypothetical protein	NA	NA	NA	NA
WP_003572360.1\|383060_383288_-	hypothetical protein	NA	NA	NA	NA
WP_003572355.1\|383484_383751_-	hypothetical protein	NA	NA	NA	NA
WP_003582220.1\|383762_384041_-	hypothetical protein	NA	NA	NA	NA
WP_016383324.1\|384722_385586_-\|transposase	IS3 family transposase	Q6J1X2	Lactobacillus_phage	4.1e-24	30.5
WP_107791771.1\|385631_386573_-\|transposase	IS3 family transposase	Q6J1X2	Lactobacillus_phage	4.0e-17	28.2
WP_003582147.1\|386506_387235_-	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	7.6e-32	40.1
WP_076626284.1\|387264_387597_-\|transposase	transposase	NA	NA	NA	NA
WP_010493173.1\|387716_388052_-	ribonucleoside-diphosphate reductase	A0A0N7IRA2	Lactobacillus_phage	6.8e-52	90.6
WP_003573729.1\|389584_389803_+	CsbD family protein	NA	NA	NA	NA
WP_003583407.1\|389998_390997_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	2.0e-54	39.5
WP_003574021.1\|391641_392562_+\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	5.3e-22	35.0
WP_010493154.1\|393469_393913_-	autolysin regulatory protein arpU	A0A0P0IZI6	Lactobacillus_phage	1.2e-77	97.3
WP_032786488.1\|394427_394760_-	hypothetical protein	NA	NA	NA	NA
WP_003574021.1\|394768_395689_-\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	5.3e-22	35.0
WP_010493149.1\|395884_396172_-	hypothetical protein	Q8LTA8	Lactobacillus_phage	1.6e-38	76.8
WP_016368116.1\|396183_396921_-	hypothetical protein	A0A097BY87	Enterococcus_phage	3.8e-47	43.6
WP_003597560.1\|396922_397345_-	hypothetical protein	NA	NA	NA	NA
WP_003574016.1\|397391_397910_-	exonuclease domain-containing protein	NA	NA	NA	NA
WP_003589925.1\|397909_398734_-	ATP-binding protein	A0A0P0I3L9	Lactobacillus_phage	6.6e-117	75.1
WP_003589923.1\|398748_399495_-	DnaD domain protein	A0A0N7IRA7	Lactobacillus_phage	5.8e-35	56.1
WP_003661649.1\|399487_399802_-	hypothetical protein	NA	NA	NA	NA
WP_003586921.1\|399982_400528_+	hypothetical protein	NA	NA	NA	NA
WP_003572201.1\|400510_400714_-	hypothetical protein	NA	NA	NA	NA
WP_003572199.1\|400798_401155_-	DUF771 domain-containing protein	U5U4L9	Lactobacillus_phage	2.0e-62	98.3
WP_003572196.1\|401220_401472_+	DUF1883 domain-containing protein	NA	NA	NA	NA
WP_016368112.1\|401644_402403_-	hypothetical protein	A0A1B0YEA7	Lactobacillus_phage	7.1e-41	48.9
WP_003574021.1\|402689_403610_-\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	5.3e-22	35.0
WP_003572187.1\|404322_404523_-	hypothetical protein	NA	NA	NA	NA
WP_003574003.1\|404564_404813_-	hypothetical protein	A0A0P0ID24	Lactobacillus_phage	2.7e-37	97.5
WP_003572184.1\|405056_405410_+	helix-turn-helix transcriptional regulator	A0A141E1M3	Streptococcus_phage	7.7e-14	40.9
WP_003572182.1\|405402_405825_+	ImmA/IrrE family metallo-endopeptidase	A0A0P0IJN5	Lactobacillus_phage	7.8e-21	39.1
WP_003574021.1\|405921_406842_-\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	5.3e-22	35.0
WP_016380288.1\|407038_407746_+	zinc ribbon domain-containing protein	NA	NA	NA	NA
WP_003572177.1\|407938_408175_+	hypothetical protein	NA	NA	NA	NA
408147:408159	attL	NA	NA	NA	NA
WP_016368286.1\|408158_408779_-	hypothetical protein	NA	NA	NA	NA
WP_003573997.1\|408868_409129_+	hypothetical protein	B4XYT0	Lactobacillus_phage	2.5e-09	40.7
WP_003577897.1\|409241_410411_+\|integrase	site-specific integrase	Q6J1W6	Lactobacillus_phage	4.3e-218	97.9
412225:412237	attR	NA	NA	NA	NA

DBSCAN-SWA_4

1489663 : 1586741

Bacillus_phage(25.0%)

transposase,tRNA,bacteriocin,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011674977.1\|1489663_1490680_+\|transposase	IS30 family transposase	A0A2K9V2S9	Faecalibacterium_phage	2.4e-36	33.4
WP_003567416.1\|1490854_1491124_+	30S ribosomal protein S14	NA	NA	NA	NA
WP_016380869.1\|1491324_1492791_+	aldehyde dehydrogenase	NA	NA	NA	NA
WP_003567413.1\|1493066_1493810_+	metal ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.1e-12	25.9
WP_003567411.1\|1493806_1494703_+	metal ABC transporter permease	NA	NA	NA	NA
WP_003567408.1\|1494699_1495641_+	zinc ABC transporter solute-binding protein	NA	NA	NA	NA
WP_003567405.1\|1495761_1496094_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003567403.1\|1496114_1496753_-	cation transporter	NA	NA	NA	NA
WP_003567401.1\|1496881_1497073_-	hypothetical protein	NA	NA	NA	NA
WP_003585581.1\|1497199_1498729_+	multicopper oxidase domain-containing protein	NA	NA	NA	NA
WP_016382205.1\|1498768_1500142_+	MFS transporter	NA	NA	NA	NA
WP_160528635.1\|1500352_1500691_+	hypothetical protein	NA	NA	NA	NA
WP_016380888.1\|1500961_1503679_-	HAD-IC family P-type ATPase	M1HJQ2	Paramecium_bursaria_Chlorella_virus	2.6e-61	29.0
WP_003567390.1\|1504066_1505674_+	divalent metal cation transporter	NA	NA	NA	NA
WP_003567386.1\|1505965_1506724_+	hypothetical protein	NA	NA	NA	NA
WP_016381946.1\|1506856_1508233_+	class II fumarate hydratase	NA	NA	NA	NA
WP_016380884.1\|1508494_1509658_-	NADH-dependent flavin oxidoreductase	NA	NA	NA	NA
WP_003580891.1\|1509683_1510418_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_016380549.1\|1510622_1511576_+	aldo/keto reductase	A0A1V0SDE7	Indivirus	3.7e-10	24.6
WP_003567376.1\|1511847_1512081_+	hypothetical protein	NA	NA	NA	NA
WP_003567374.1\|1512077_1512293_+	hypothetical protein	NA	NA	NA	NA
WP_003659595.1\|1512428_1512737_+	hypothetical protein	NA	NA	NA	NA
WP_003580888.1\|1513007_1513604_+	sugar O-acetyltransferase	NA	NA	NA	NA
WP_003580886.1\|1513722_1514058_+\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_003576306.1\|1514376_1514568_+	hypothetical protein	NA	NA	NA	NA
WP_003580874.1\|1514819_1515152_+	hypothetical protein	NA	NA	NA	NA
WP_003580872.1\|1515709_1516522_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_003567359.1\|1517322_1517547_-	hypothetical protein	NA	NA	NA	NA
WP_003567358.1\|1517868_1518057_+\|bacteriocin	ComC/BlpC family leader-containing pheromone/bacteriocin	NA	NA	NA	NA
WP_032675994.1\|1518091_1518265_+\|bacteriocin	bacteriocin	NA	NA	NA	NA
WP_003580868.1\|1518524_1518764_-	hypothetical protein	NA	NA	NA	NA
WP_016383118.1\|1519310_1519508_+	hypothetical protein	NA	NA	NA	NA
WP_003567351.1\|1519869_1520676_-	response regulator transcription factor	NA	NA	NA	NA
WP_003580853.1\|1520680_1521979_-	GHKL domain-containing protein	NA	NA	NA	NA
WP_003571414.1\|1522168_1522306_+	hypothetical protein	NA	NA	NA	NA
WP_016381944.1\|1522771_1524964_+	peptide cleavage/export ABC transporter	W8CYL7	Bacillus_phage	1.1e-36	26.7
WP_003585563.1\|1524974_1526354_+\|bacteriocin	bacteriocin secretion accessory protein	NA	NA	NA	NA
WP_003567340.1\|1526527_1526878_+	hypothetical protein	NA	NA	NA	NA
WP_003580849.1\|1526950_1527262_+	hypothetical protein	NA	NA	NA	NA
WP_003567335.1\|1527567_1528923_+	threonine/serine exporter family protein	NA	NA	NA	NA
WP_003580847.1\|1529024_1529321_+\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_003580845.1\|1529513_1529798_+\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_003567328.1\|1529821_1530100_+\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_003580842.1\|1530144_1530933_-	hypothetical protein	NA	NA	NA	NA
WP_003580841.1\|1530985_1531774_-	hypothetical protein	NA	NA	NA	NA
WP_003567322.1\|1531770_1532100_-	PadR family transcriptional regulator	NA	NA	NA	NA
WP_003580838.1\|1532235_1532883_-	helix-turn-helix transcriptional regulator	A0A0S2MVM8	Bacillus_phage	1.7e-06	37.5
WP_003585559.1\|1533153_1534209_-	DUF2974 domain-containing protein	NA	NA	NA	NA
WP_003580834.1\|1534417_1535614_+	DUF2075 domain-containing protein	NA	NA	NA	NA
WP_003580832.1\|1535708_1536266_+	hypothetical protein	NA	NA	NA	NA
WP_003585557.1\|1536543_1539549_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_003580827.1\|1539550_1540873_+	hypothetical protein	NA	NA	NA	NA
WP_003580826.1\|1540869_1542429_+	SpaH/EbpB family LPXTG-anchored major pilin	NA	NA	NA	NA
WP_016381827.1\|1542435_1543263_+	class C sortase	NA	NA	NA	NA
WP_003580823.1\|1543851_1545075_+	hypothetical protein	NA	NA	NA	NA
WP_003580821.1\|1545263_1545800_+	hypothetical protein	NA	NA	NA	NA
WP_003567298.1\|1546053_1546248_+	hypothetical protein	NA	NA	NA	NA
WP_003585549.1\|1546564_1547398_+	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	5.6e-47	42.4
WP_003580815.1\|1547486_1548743_+	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	6.2e-106	54.0
WP_003567292.1\|1548821_1550054_-	MFS transporter	NA	NA	NA	NA
WP_003567290.1\|1550381_1550633_+	hypothetical protein	NA	NA	NA	NA
WP_003567288.1\|1550857_1551064_+	hypothetical protein	NA	NA	NA	NA
WP_003567286.1\|1551134_1551392_+	hypothetical protein	NA	NA	NA	NA
WP_003567284.1\|1551523_1551730_+	CsbD family protein	NA	NA	NA	NA
WP_003585543.1\|1551917_1553033_+	lactate 2-monooxygenase	NA	NA	NA	NA
WP_003567280.1\|1553223_1553508_-	chromosome partitioning protein ParB	NA	NA	NA	NA
WP_003580809.1\|1553521_1554643_-	low temperature requirement A protein	NA	NA	NA	NA
WP_016381826.1\|1555155_1555827_+	2,3-diphosphoglycerate-dependent phosphoglycerate mutase	NA	NA	NA	NA
WP_003576237.1\|1556326_1556950_+	CBS domain-containing protein	NA	NA	NA	NA
WP_016381637.1\|1557111_1559742_+	pyruvate, phosphate dikinase	H8YJB7	Vibrio_phage	8.4e-89	40.0
WP_003567271.1\|1559899_1561954_-	potassium transporter Kup	M1IAJ4	Acanthocystis_turfacea_Chlorella_virus	9.5e-64	33.3
WP_003576231.1\|1562115_1562994_-	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	1.2e-12	26.4
WP_003580803.1\|1563056_1564253_-	hypothetical protein	NA	NA	NA	NA
WP_003580801.1\|1564249_1565350_-	hypothetical protein	NA	NA	NA	NA
WP_003576225.1\|1565577_1566924_-	C1 family peptidase	A0A2H4UTL8	Bodo_saltans_virus	6.9e-47	29.8
WP_003571381.1\|1567156_1568476_-	C1 family peptidase	R4TV59	Phaeocystis_globosa_virus	9.2e-60	34.5
WP_003567260.1\|1568720_1569098_+	DUF805 domain-containing protein	NA	NA	NA	NA
WP_003567258.1\|1569212_1569503_-	N-acetyltransferase	NA	NA	NA	NA
WP_003567256.1\|1569724_1570267_+	dUTP diphosphatase	J9PV85	Bacillus_phage	8.1e-39	48.6
WP_003580798.1\|1570283_1571648_+	DNA repair protein RadA	NA	NA	NA	NA
WP_003567252.1\|1571669_1572785_+	PIN/TRAM domain-containing protein	NA	NA	NA	NA
WP_003580795.1\|1572888_1573785_-	Rgg/GadR/MutR family transcriptional regulator	NA	NA	NA	NA
WP_016366635.1\|1574065_1574971_+	ATP-binding cassette domain-containing protein	A0A2H4PQG7	Staphylococcus_phage	1.6e-34	39.0
WP_003577837.1\|1574974_1575751_+	ABC transporter permease subunit	NA	NA	NA	NA
WP_080596037.1\|1575788_1575899_+\|bacteriocin	bacteriocin	NA	NA	NA	NA
WP_003577835.1\|1575942_1576056_+\|bacteriocin	bacteriocin	NA	NA	NA	NA
WP_016381824.1\|1576156_1578322_+	peptide cleavage/export ABC transporter	W8CYL7	Bacillus_phage	1.1e-38	28.0
WP_003577830.1\|1578487_1579759_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_003567242.1\|1579923_1580298_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_003577828.1\|1580304_1581321_+	membrane protein	NA	NA	NA	NA
WP_003577825.1\|1581333_1582173_+\|protease	YhfC family intramembrane metalloprotease	NA	NA	NA	NA
WP_003567235.1\|1582318_1583149_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_016380703.1\|1583332_1584004_+	ribose-5-phosphate isomerase A	NA	NA	NA	NA
WP_003580775.1\|1584119_1585100_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_003576207.1\|1585247_1586741_+\|tRNA	glutamate--tRNA ligase	NA	NA	NA	NA

DBSCAN-SWA_5

2773113 : 2813733

Lactobacillus_phage(94.55%)

transposase,tail,integrase,terminase,head,portal,capsid,holin

attL 2811315:2811330|attR 2816293:2816308

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_016381949.1\|2773113_2774280_-	LysM peptidoglycan-binding domain-containing protein	A0A0P0HRN9	Lactobacillus_phage	3.8e-166	76.4
WP_016381950.1\|2774290_2774737_-\|holin	phage holin	A8YQK6	Lactobacillus_phage	9.3e-65	95.9
WP_016381951.1\|2774733_2774940_-	hypothetical protein	A0A2D1GPJ3	Lactobacillus_phage	5.5e-12	97.4
WP_016381952.1\|2774920_2775307_-	hypothetical protein	U5U712	Lactobacillus_phage	2.1e-65	98.4
WP_016381953.1\|2775337_2775469_-	XkdX family protein	A0A0P0HRS7	Lactobacillus_phage	7.2e-18	95.3
WP_016381954.1\|2775461_2775737_-	phage protein	A0A0P0IZK1	Lactobacillus_phage	5.2e-10	41.2
WP_016381955.1\|2775748_2778271_-	phage protein	B4XYQ5	Lactobacillus_phage	2.4e-149	41.2
WP_016381956.1\|2778270_2780334_-	hypothetical protein	A0A0P0IJR2	Lactobacillus_phage	8.4e-161	47.6
WP_016381957.1\|2780336_2783426_-	tape measure protein	A0A0P0IJD2	Lactobacillus_phage	3.9e-279	93.9
WP_005711407.1\|2783418_2783772_-	hypothetical protein	A0A0P0I7N9	Lactobacillus_phage	2.4e-55	97.4
WP_032793358.1\|2783876_2784209_-	phage protein	A0A0P0IQQ6	Lactobacillus_phage	3.7e-50	95.5
WP_016381959.1\|2784295_2784898_-\|tail	phage major tail protein	A0A0P0ID88	Lactobacillus_phage	6.4e-101	94.0
WP_016380683.1\|2784909_2785314_-	DUF3168 domain-containing protein	A0A0P0IQB5	Lactobacillus_phage	1.0e-70	98.5
WP_016381960.1\|2785314_2785680_-	hypothetical protein	A0A0P0I3G7	Lactobacillus_phage	2.2e-56	94.2
WP_016381961.1\|2785676_2785979_-	hypothetical protein	A0A0P0HRN0	Lactobacillus_phage	2.6e-47	89.0
WP_003605845.1\|2785983_2786358_-\|head,tail	phage head-tail connector protein	A0A0P0IZF6	Lactobacillus_phage	4.3e-63	98.4
WP_016381962.1\|2786357_2787236_-	hypothetical protein	A0A0P0IJL6	Lactobacillus_phage	7.7e-180	99.7
WP_016381964.1\|2787716_2788757_-\|capsid	major capsid protein	A0A0P0I7J2	Lactobacillus_phage	9.7e-190	99.1
WP_003605853.1\|2788770_2789085_-	hypothetical protein	A0A0N7IR89	Lactobacillus_phage	2.7e-50	100.0
WP_016381965.1\|2789097_2789739_-	DUF4355 domain-containing protein	A0A0P0ID10	Lactobacillus_phage	4.7e-78	85.0
WP_003575593.1\|2789880_2790315_-	hypothetical protein	NA	NA	NA	NA
WP_003575596.1\|2790311_2790638_-	hypothetical protein	A0A0P0IJR5	Lactobacillus_phage	4.7e-50	91.7
WP_016381966.1\|2790647_2791634_-	hypothetical protein	A0A0P0ID43	Lactobacillus_phage	1.8e-177	95.4
WP_032793367.1\|2791599_2793027_-\|portal	phage portal protein	A0A0P0IJV3	Lactobacillus_phage	4.6e-259	97.7
WP_016381968.1\|2793031_2794285_-\|terminase	PBSX family phage terminase large subunit	A0A0P0I3B0	Lactobacillus_phage	2.5e-248	98.8
WP_016381969.1\|2794268_2794841_-\|terminase	terminase small subunit	A0A0P0IUY4	Lactobacillus_phage	6.9e-81	95.8
WP_016381970.1\|2794877_2795207_-	hypothetical protein	A0A0P0IJY9	Lactobacillus_phage	1.1e-49	87.7
WP_016381971.1\|2795193_2796411_-	hypothetical protein	A0A2D1GPQ9	Lactobacillus_phage	1.8e-235	96.8
WP_052915996.1\|2796440_2797064_-	hypothetical protein	NA	NA	NA	NA
WP_016381973.1\|2797695_2798139_-	autolysin regulatory protein ArpU	A0A0P0IZI6	Lactobacillus_phage	1.0e-76	95.9
WP_012491447.1\|2798310_2798508_-	hypothetical protein	A0A1B0Y850	Lactobacillus_phage	2.8e-29	100.0
WP_016381975.1\|2798581_2798869_-	hypothetical protein	Q8LTA8	Lactobacillus_phage	8.3e-51	94.7
WP_016381976.1\|2798905_2799115_-	hypothetical protein	A0A2D1GPJ8	Lactobacillus_phage	4.5e-30	88.4
WP_016381977.1\|2799111_2799510_-	hypothetical protein	C1KFE5	Lactobacillus_virus	5.1e-30	56.1
WP_016381978.1\|2799496_2799850_-	hypothetical protein	A0A2D1GPL5	Lactobacillus_phage	6.3e-32	81.2
WP_016381979.1\|2799846_2800173_-	hypothetical protein	Q6J1U7	Lactobacillus_phage	8.1e-18	44.5
WP_016381980.1\|2800162_2800432_-	hypothetical protein	NA	NA	NA	NA
WP_016381981.1\|2800418_2800943_-	DUF1642 domain-containing protein	Q8LTB6	Lactobacillus_phage	2.1e-60	71.5
WP_032793365.1\|2800939_2801050_-	hypothetical protein	A0A2D1GP93	Lactobacillus_phage	9.3e-11	91.7
WP_016381982.1\|2801063_2801429_-	hypothetical protein	A0A0P0HRU0	Lactobacillus_phage	6.9e-66	99.2
WP_016381983.1\|2801425_2801680_-	hypothetical protein	U5U728	Lactobacillus_phage	1.2e-37	95.2
WP_016381984.1\|2801726_2802176_-	hypothetical protein	A0A0P0ID70	Lactobacillus_phage	2.2e-61	85.2
WP_004562022.1\|2802172_2802388_-	helix-turn-helix transcriptional regulator	A0A0P0IJY1	Lactobacillus_phage	1.3e-32	100.0
WP_016381986.1\|2802702_2803188_-	single-stranded DNA-binding protein	A0A0P0IJE0	Lactobacillus_phage	1.8e-53	87.0
WP_016381987.1\|2803199_2804117_-	DUF4373 domain-containing protein	A0A0P0HRQ2	Lactobacillus_phage	2.9e-89	57.5
WP_016373294.1\|2804128_2804893_-	phage protein	A0A0P0IZH9	Lactobacillus_phage	2.3e-79	55.2
WP_076665449.1\|2804912_2805779_-	recombinase RecT	A0A1X9I5N6	Streptococcus_phage	2.3e-59	53.3
WP_032793675.1\|2805964_2806183_-	hypothetical protein	NA	NA	NA	NA
WP_016382302.1\|2806335_2806557_-	helix-turn-helix domain-containing protein	A0A0P0ID64	Lactobacillus_phage	2.6e-36	98.6
WP_016382303.1\|2806535_2807084_-	hypothetical protein	A0A1B0YE60	Lactobacillus_phage	6.0e-98	97.8
WP_016373289.1\|2807383_2807593_+	hypothetical protein	A0A1B0Y3M6	Lactobacillus_phage	1.1e-31	98.6
WP_003574526.1\|2807589_2807901_-	hypothetical protein	A0A1B0Y2Q8	Lactobacillus_phage	2.2e-52	100.0
WP_016382304.1\|2807897_2808140_-	helix-turn-helix transcriptional regulator	A0A0P0HRP5	Lactobacillus_phage	1.3e-33	92.5
WP_080647126.1\|2808274_2808613_+	helix-turn-helix transcriptional regulator	A0A0P0IZG9	Lactobacillus_phage	1.0e-55	99.1
WP_003574521.1\|2808602_2809022_+	ImmA/IrrE family metallo-endopeptidase	A0A0P0IJN5	Lactobacillus_phage	5.6e-72	92.8
WP_003574021.1\|2809733_2810654_-\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	5.3e-22	35.0
WP_003585060.1\|2810918_2811602_+	hypothetical protein	NA	NA	NA	NA
2811315:2811330	attL	NA	NA	NA	NA
WP_003574518.1\|2811806_2812232_+	pyridoxamine 5'-phosphate oxidase family protein	A0A0P0I7K6	Lactobacillus_phage	2.7e-61	86.5
WP_016382342.1\|2812255_2812459_+	hypothetical protein	A0A0P0IQK8	Lactobacillus_phage	4.0e-31	94.0
WP_012491423.1\|2812548_2813733_+\|integrase	site-specific integrase	A0A0P0I3D2	Lactobacillus_phage	6.6e-227	100.0
2816293:2816308	attR	NA	NA	NA	NA

DBSCAN-SWA_6

2881490 : 2908306

Bacillus_phage(20.0%)

tail,terminase,head,portal,capsid,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003578560.1\|2881490_2882921_-\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	NA	NA	NA	NA
WP_003569751.1\|2882922_2884377_-\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	NA	NA	NA	NA
WP_003564470.1\|2884380_2884677_-\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	NA	NA	NA	NA
WP_003569748.1\|2884728_2885880_-	CamS family sex pheromone protein	NA	NA	NA	NA
WP_003569746.1\|2885889_2887914_-	NAD-dependent DNA ligase LigA	A0A0K2QQN8	Ralstonia_phage	2.7e-103	36.9
WP_003569744.1\|2887970_2890226_-	DNA helicase PcrA	A7KV33	Bacillus_phage	3.5e-136	41.3
WP_003564461.1\|2890691_2891012_+	DUF898 family protein	S5MNN8	Brevibacillus_phage	2.4e-14	71.4
WP_003569742.1\|2891043_2891835_+	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA
WP_003569740.1\|2891838_2893035_+	zinc-ribbon domain-containing protein	NA	NA	NA	NA
WP_003590324.1\|2893481_2894789_+	Y-family DNA polymerase	Q6DMX4	Streptococcus_phage	1.2e-83	38.5
WP_003574405.1\|2894781_2895102_+	hypothetical protein	NA	NA	NA	NA
WP_003564448.1\|2895182_2895686_-	hypothetical protein	NA	NA	NA	NA
WP_003564445.1\|2895710_2896145_-	ACT domain-containing protein	NA	NA	NA	NA
WP_003564443.1\|2896593_2896803_+	hypothetical protein	NA	NA	NA	NA
WP_003569732.1\|2896864_2897398_-	N-acetyltransferase	NA	NA	NA	NA
WP_003564439.1\|2897666_2899142_-	HAMP domain-containing protein	A0A1X9VNV7	Mimivirus	4.2e-05	24.5
WP_003564436.1\|2899138_2899867_-	response regulator transcription factor	W8CYM9	Bacillus_phage	5.1e-36	35.7
WP_003569728.1\|2899882_2900278_-	SdpI family protein	NA	NA	NA	NA
WP_003568375.1\|2900990_2901239_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA
WP_016380844.1\|2901432_2901786_+	hypothetical protein	NA	NA	NA	NA
WP_003574397.1\|2901851_2902145_-\|head,tail	phage gp6-like head-tail connector protein	NA	NA	NA	NA
WP_016382143.1\|2902200_2903757_-\|capsid	phage major capsid protein	B8R651	Lactobacillus_phage	2.8e-39	26.5
WP_016382144.1\|2903746_2904925_-\|portal	phage portal protein	A0A2H4JB06	uncultured_Caudovirales_phage	2.2e-60	35.3
WP_003574365.1\|2904929_2905109_-	hypothetical protein	NA	NA	NA	NA
WP_016382145.1\|2905074_2906778_-\|terminase	terminase large subunit	A0A2H4JBN3	uncultured_Caudovirales_phage	8.6e-119	42.5
WP_003574359.1\|2906774_2907245_-\|terminase	phage terminase small subunit P27 family	NA	NA	NA	NA
WP_016380371.1\|2907361_2907784_-	HNH endonuclease	A0A1J0MFT4	Staphylococcus_phage	8.3e-23	46.7
WP_016380372.1\|2907780_2907966_-	hypothetical protein	NA	NA	NA	NA
WP_016380373.1\|2907970_2908306_-\|head	phage head closure protein	NA	NA	NA	NA

DBSCAN-SWA_7

3046655 : 3122097

Lactobacillus_phage(94.92%)

tail,integrase,terminase,head,portal,capsid,tRNA,protease,holin

attL 3082211:3082226|attR 3106932:3106947

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003569505.1\|3046655_3047165_-\|tRNA	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	NA	NA	NA	NA
WP_003569501.1\|3047419_3048262_-	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_003564155.1\|3048327_3049275_+	magnesium transporter CorA family protein	NA	NA	NA	NA
WP_003564154.1\|3049502_3050492_+	GMP reductase	Q4ZCY7	Staphylococcus_virus	8.2e-138	71.9
WP_003564153.1\|3050619_3050889_+	30S ribosomal protein S14	NA	NA	NA	NA
WP_003569498.1\|3050999_3051377_-	PTS glucitol/sorbitol transporter subunit IIA	NA	NA	NA	NA
WP_003587492.1\|3051648_3052689_+	lactonase family protein	NA	NA	NA	NA
WP_003564150.1\|3052891_3053710_+	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA
WP_003569480.1\|3053731_3054367_+	copper homeostasis protein CutC	NA	NA	NA	NA
WP_003569478.1\|3054523_3055582_+	FAD:protein FMN transferase	NA	NA	NA	NA
WP_003569476.1\|3055690_3056593_-	RluA family pseudouridine synthase	NA	NA	NA	NA
WP_003564146.1\|3056592_3057390_-	NAD kinase	NA	NA	NA	NA
WP_003564145.1\|3057391_3058063_-	GTP pyrophosphokinase family protein	NA	NA	NA	NA
WP_003564144.1\|3058256_3058850_+	CYTH domain-containing protein	NA	NA	NA	NA
WP_003564143.1\|3058919_3059555_+	dihydroorotate dehydrogenase	NA	NA	NA	NA
WP_003569473.1\|3059744_3060800_-	competence protein	NA	NA	NA	NA
WP_003569470.1\|3060909_3062253_-	PFL family protein	NA	NA	NA	NA
WP_003564140.1\|3062301_3062568_-	ACT domain-containing protein	NA	NA	NA	NA
WP_003587485.1\|3062758_3064087_+	phosphohydrolase	NA	NA	NA	NA
WP_016380780.1\|3064220_3065426_-	putative C-S lyase	NA	NA	NA	NA
WP_003564137.1\|3065893_3066367_-	glutathione peroxidase	NA	NA	NA	NA
WP_003590262.1\|3066463_3068023_-	glycosyltransferase	NA	NA	NA	NA
WP_003569462.1\|3068050_3069562_-	glycosyltransferase	NA	NA	NA	NA
WP_016382011.1\|3070084_3071059_-	hypothetical protein	A0A0P0I7S1	Lactobacillus_phage	1.7e-196	99.4
WP_012491267.1\|3071045_3071234_-	hypothetical protein	A0A0P0IQT6	Lactobacillus_phage	6.7e-25	100.0
WP_016382012.1\|3071233_3071668_-\|holin	phage holin	A0A0P0IDC6	Lactobacillus_phage	7.9e-45	89.6
WP_016382013.1\|3071657_3071951_-	hypothetical protein	A0A0P0IK41	Lactobacillus_phage	3.7e-46	95.9
WP_016382014.1\|3071997_3072267_-	hypothetical protein	A0A0P0I3K6	Lactobacillus_phage	3.8e-37	96.6
WP_016382015.1\|3072269_3072695_-	DUF1617 family protein	A0A1B0Y2S1	Lactobacillus_phage	3.3e-72	99.3
WP_016382016.1\|3072723_3077145_-	hypothetical protein	A0A1B0Y2S0	Lactobacillus_phage	0.0e+00	87.3
WP_016382017.1\|3077141_3077837_-\|tail	tail protein	A0A0P0HRV6	Lactobacillus_phage	1.0e-126	98.3
WP_016382018.1\|3077843_3081014_-\|tail	tail tape measure protein	A0A1B0YA78	Lactobacillus_phage	0.0e+00	98.6
WP_016382019.1\|3081275_3081641_-	hypothetical protein	A0A1B0Y865	Lactobacillus_phage	5.1e-61	98.3
WP_016382020.1\|3081717_3082365_-	hypothetical protein	A0A0P0I7R6	Lactobacillus_phage	1.9e-114	96.3
3082211:3082226	attL	NA	NA	NA	NA
WP_016382021.1\|3082376_3082760_-	hypothetical protein	A0A0P0IQS9	Lactobacillus_phage	1.9e-66	96.1
WP_012491256.1\|3082749_3083079_-	hypothetical protein	A0A0P0IDB8	Lactobacillus_phage	3.1e-57	100.0
WP_012491255.1\|3083062_3083401_-\|head	phage head closure protein	A0A0N7IRA3	Lactobacillus_phage	2.2e-58	100.0
WP_003582271.1\|3083339_3083666_-\|head,tail	phage gp6-like head-tail connector protein	A0A1B0Y2R7	Lactobacillus_phage	7.0e-54	100.0
WP_016382022.1\|3083679_3083928_-	hypothetical protein	A0A0P0I3K0	Lactobacillus_phage	1.3e-36	96.3
WP_016382023.1\|3084001_3085231_-\|capsid	phage major capsid protein	A0A1B0YA73	Lactobacillus_phage	9.9e-226	99.0
WP_012491252.1\|3085235_3085943_-\|protease	Clp protease ClpP	A0A0P0HRU7	Lactobacillus_phage	7.2e-128	100.0
WP_016382024.1\|3085920_3087156_-\|portal	phage portal protein	A0A0P0IZM3	Lactobacillus_phage	7.1e-232	98.8
WP_016382025.1\|3087174_3088905_-\|terminase	terminase large subunit	A0A0P0IJU3	Lactobacillus_phage	0.0e+00	99.7
WP_032769583.1\|3088907_3089282_-	hypothetical protein	A0A1B0YE76	Lactobacillus_phage	3.4e-60	97.6
WP_016382027.1\|3089351_3089732_-	hypothetical protein	A0A0P0HRY0	Lactobacillus_phage	2.4e-69	96.8
WP_016372310.1\|3090336_3090708_-	ASCH domain-containing protein	Q938L5	Temperate_phage	5.1e-24	43.6
WP_016382029.1\|3090685_3091753_-	hypothetical protein	Q6SE88	Lactobacillus_prophage	2.2e-72	41.5
WP_016382030.1\|3092623_3093058_-	autolysin regulatory protein ArpU	B4XYT9	Lactobacillus_phage	1.1e-51	74.1
WP_016382031.1\|3093310_3093529_-	helix-turn-helix transcriptional regulator	A0A0P0IXA5	Lactobacillus_phage	1.0e-32	98.6
WP_016382032.1\|3093550_3093760_-	hypothetical protein	A0A2D1GPJ8	Lactobacillus_phage	1.1e-28	85.5
WP_016372087.1\|3094358_3094790_+	hypothetical protein	NA	NA	NA	NA
WP_022671500.1\|3094814_3095333_-	DNA polymerase III subunit epsilon	NA	NA	NA	NA
WP_107791792.1\|3095332_3096157_-	ATP-binding protein	A0A0P0I3L9	Lactobacillus_phage	3.0e-117	75.5
WP_016382216.1\|3096171_3096921_-	DnaD domain protein	A0A0N7IRA7	Lactobacillus_phage	1.5e-35	56.1
WP_016382215.1\|3096913_3097228_-	hypothetical protein	NA	NA	NA	NA
WP_003657835.1\|3097592_3097817_-	DUF771 domain-containing protein	A0A0P0IQT9	Lactobacillus_phage	2.6e-39	100.0
WP_003593164.1\|3097925_3098138_-	hypothetical protein	A0A0N7IRA6	Lactobacillus_phage	1.7e-29	98.6
WP_016382214.1\|3098145_3098868_-	Rha family transcriptional regulator	A0A0P0IDD0	Lactobacillus_phage	6.9e-126	99.2
WP_003578190.1\|3098864_3099062_-	hypothetical protein	A0A0P0IK60	Lactobacillus_phage	5.2e-28	100.0
WP_016364605.1\|3099335_3099665_+	helix-turn-helix transcriptional regulator	A0A1B0Y3N1	Lactobacillus_phage	1.1e-09	33.0
WP_003598062.1\|3099666_3100077_+	hypothetical protein	NA	NA	NA	NA
WP_003598061.1\|3100090_3100855_+	KQT family voltage-gated potassium channel protein	A0A1B0Y2S3	Lactobacillus_phage	9.1e-44	55.5
WP_003598059.1\|3101033_3101327_+	hypothetical protein	A0A0P0HRW5	Lactobacillus_phage	5.7e-47	100.0
WP_012491228.1\|3101330_3101813_+	hypothetical protein	A0A0P0IZP3	Lactobacillus_phage	2.1e-83	100.0
WP_003598055.1\|3101882_3102314_+	hypothetical protein	A0A0P0IJV8	Lactobacillus_phage	6.8e-73	100.0
WP_003598052.1\|3102458_3103526_+	Abi family protein	A0A0N7IRA5	Lactobacillus_phage	1.1e-207	100.0
WP_016382213.1\|3103643_3104783_+\|integrase	site-specific integrase	A0A0P0IXL3	Lactobacillus_phage	1.9e-215	98.4
WP_016382011.1\|3105165_3106140_-	hypothetical protein	A0A0P0I7S1	Lactobacillus_phage	1.7e-196	99.4
WP_012491267.1\|3106126_3106315_-	hypothetical protein	A0A0P0IQT6	Lactobacillus_phage	6.7e-25	100.0
WP_016382012.1\|3106314_3106749_-\|holin	phage holin	A0A0P0IDC6	Lactobacillus_phage	7.9e-45	89.6
WP_016382013.1\|3106738_3107032_-	hypothetical protein	A0A0P0IK41	Lactobacillus_phage	3.7e-46	95.9
3106932:3106947	attR	NA	NA	NA	NA
WP_016382014.1\|3107078_3107348_-	hypothetical protein	A0A0P0I3K6	Lactobacillus_phage	3.8e-37	96.6
WP_016382015.1\|3107350_3107776_-	DUF1617 family protein	A0A1B0Y2S1	Lactobacillus_phage	3.3e-72	99.3
WP_016382016.1\|3107804_3112226_-	hypothetical protein	A0A1B0Y2S0	Lactobacillus_phage	0.0e+00	87.3
WP_016382017.1\|3112222_3112918_-\|tail	tail protein	A0A0P0HRV6	Lactobacillus_phage	1.0e-126	98.3
WP_016382018.1\|3112924_3116095_-\|tail	tail tape measure protein	A0A1B0YA78	Lactobacillus_phage	0.0e+00	98.6
WP_016382019.1\|3116356_3116722_-	hypothetical protein	A0A1B0Y865	Lactobacillus_phage	5.1e-61	98.3
WP_016382020.1\|3116798_3117446_-	hypothetical protein	A0A0P0I7R6	Lactobacillus_phage	1.9e-114	96.3
WP_016382021.1\|3117457_3117841_-	hypothetical protein	A0A0P0IQS9	Lactobacillus_phage	1.9e-66	96.1
WP_012491256.1\|3117830_3118160_-	hypothetical protein	A0A0P0IDB8	Lactobacillus_phage	3.1e-57	100.0
WP_012491255.1\|3118143_3118482_-\|head	phage head closure protein	A0A0N7IRA3	Lactobacillus_phage	2.2e-58	100.0
WP_003582271.1\|3118420_3118747_-\|head,tail	phage gp6-like head-tail connector protein	A0A1B0Y2R7	Lactobacillus_phage	7.0e-54	100.0
WP_016382022.1\|3118760_3119009_-	hypothetical protein	A0A0P0I3K0	Lactobacillus_phage	1.3e-36	96.3
WP_016382023.1\|3119082_3120312_-\|capsid	phage major capsid protein	A0A1B0YA73	Lactobacillus_phage	9.9e-226	99.0
WP_161515591.1\|3121002_3122097_-\|portal	phage portal protein	A0A0P0IZM3	Lactobacillus_phage	5.8e-201	98.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP048003

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection