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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP034938 Pectobacterium odoriferum strain JK2.1 chromosome, complete genome 5 crisprs cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,RT,DEDDh,csa3,cas3,DinG,WYL 0 18 6 0
NZ_CP034939 Pectobacterium odoriferum strain JK2.1 plasmid p.Jk2_1, complete sequence 0 crisprs NA 0 0 0 0

Results visualization

1. NZ_CP034938
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP034938_1 441146-442456 TypeI-E I-E
21 spacers
cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP034938_2 814470-814572 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP034938_3 2224887-2224991 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP034938_4 4054600-4055047 Orphan I-F
7 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP034938_5 4061464-4062509 Orphan I-F:NA
17 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP034938_1 1.9|441664|32|NZ_CP034938|PILER-CR,CRISPRCasFinder,CRT 441664-441695 32 NC_019522 Pectobacterium phage ZF40, complete genome 31022-31053 0 1.0
NZ_CP034938_1 1.6|441481|32|NZ_CP034938|PILER-CR,CRISPRCasFinder,CRT 441481-441512 32 KM389288 UNVERIFIED: Escherichia phage Phi06_2987 S clone contig00002 genomic sequence 6957-6988 3 0.906
NZ_CP034938_4 4.5|4054868|32|NZ_CP034938|PILER-CR,CRISPRCasFinder,CRT 4054868-4054899 32 MF158038 Shigella phage Sf11 SMD-2017, complete genome 22190-22221 6 0.812
NZ_CP034938_1 1.8|441603|32|NZ_CP034938|PILER-CR,CRISPRCasFinder,CRT 441603-441634 32 MF415411 Klebsiella phage KPN U2874, complete genome 29144-29175 7 0.781
NZ_CP034938_1 1.8|441603|32|NZ_CP034938|PILER-CR,CRISPRCasFinder,CRT 441603-441634 32 MF476924 Klebsiella phage YMC15/11/N53_KPN_BP, complete genome 29144-29175 7 0.781
NZ_CP034938_1 1.8|441603|32|NZ_CP034938|PILER-CR,CRISPRCasFinder,CRT 441603-441634 32 MF415413 Klebsiella phage KPN N54, complete genome 29144-29175 7 0.781
NZ_CP034938_1 1.8|441603|32|NZ_CP034938|PILER-CR,CRISPRCasFinder,CRT 441603-441634 32 MF415410 Klebsiella phage KPN N137, complete genome 29144-29175 7 0.781
NZ_CP034938_1 1.8|441603|32|NZ_CP034938|PILER-CR,CRISPRCasFinder,CRT 441603-441634 32 MG835858 Klebsiella phage KPN N98, complete genome 29144-29175 7 0.781
NZ_CP034938_1 1.18|442213|32|NZ_CP034938|PILER-CR,CRISPRCasFinder,CRT 442213-442244 32 NZ_CP011009 Bacillus simplex strain SH-B26 plasmid pSHB26, complete sequence 55394-55425 7 0.781
NZ_CP034938_5 5.7|4061852|32|NZ_CP034938|CRISPRCasFinder,PILER-CR 4061852-4061883 32 NC_009955 Dinoroseobacter shibae DFL 12 = DSM 16493 plasmid pDSHI01, complete sequence 118159-118190 7 0.781
NZ_CP034938_5 5.7|4061852|32|NZ_CP034938|CRISPRCasFinder,PILER-CR 4061852-4061883 32 NZ_CP038146 Streptomyces sp. S501 plasmid unnamed, complete sequence 29737-29768 7 0.781
NZ_CP034938_4 4.3|4054748|32|NZ_CP034938|PILER-CR,CRISPRCasFinder,CRT 4054748-4054779 32 NZ_CP045296 Paenibacillus cellulositrophicus strain KACC 16577 plasmid unnamed1, complete sequence 311679-311710 8 0.75
NZ_CP034938_4 4.6|4054928|32|NZ_CP034938|PILER-CR,CRISPRCasFinder,CRT 4054928-4054959 32 NZ_CP032696 Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525b, complete sequence 323428-323459 8 0.75
NZ_CP034938_5 5.5|4061732|32|NZ_CP034938|CRISPRCasFinder,PILER-CR 4061732-4061763 32 NZ_AP019553 Athalassotoga saccharophila strain NAS-01 plasmid pATS2, complete sequence 5876-5907 8 0.75
NZ_CP034938_5 5.8|4061912|32|NZ_CP034938|CRISPRCasFinder,PILER-CR 4061912-4061943 32 MF417904 Uncultured Caudovirales phage clone 10S_9, partial genome 11836-11867 8 0.75
NZ_CP034938_1 1.4|441359|32|NZ_CP034938|PILER-CR,CRISPRCasFinder,CRT 441359-441390 32 NZ_CP039425 Citricoccus sp. SGAir0253 plasmid unnamed1, complete sequence 117514-117545 9 0.719
NZ_CP034938_1 1.4|441359|32|NZ_CP034938|PILER-CR,CRISPRCasFinder,CRT 441359-441390 32 NZ_CP039430 Citricoccus sp. SGAir0453 plasmid unnamed1, complete sequence 117512-117543 9 0.719
NZ_CP034938_1 1.10|441725|32|NZ_CP034938|PILER-CR,CRISPRCasFinder,CRT 441725-441756 32 MK962629 Achromobacter phage vB_AxyP_19-32_Axy10, complete genome 8744-8775 9 0.719
NZ_CP034938_1 1.12|441847|32|NZ_CP034938|PILER-CR,CRISPRCasFinder,CRT 441847-441878 32 NZ_KX711616 Bacillus subtilis strain 72 plasmid pBS72, complete sequence 23464-23495 9 0.719
NZ_CP034938_5 5.4|4061672|32|NZ_CP034938|CRISPRCasFinder,PILER-CR 4061672-4061703 32 NZ_CP017942 Phyllobacterium zundukense strain Tri-48 plasmid unnamed3, complete sequence 470917-470948 9 0.719
NZ_CP034938_5 5.6|4061792|32|NZ_CP034938|CRISPRCasFinder,PILER-CR 4061792-4061823 32 NZ_CP043499 Rhizobium grahamii strain BG7 plasmid unnamed, complete sequence 579631-579662 9 0.719
NZ_CP034938_5 5.7|4061852|32|NZ_CP034938|CRISPRCasFinder,PILER-CR 4061852-4061883 32 NC_012852 Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132504, complete sequence 289355-289386 9 0.719
NZ_CP034938_5 5.7|4061852|32|NZ_CP034938|CRISPRCasFinder,PILER-CR 4061852-4061883 32 NZ_CP048283 Rhizobium leguminosarum bv. viciae 248 plasmid pRle248c, complete sequence 95201-95232 9 0.719
NZ_CP034938_5 5.9|4061972|32|NZ_CP034938|CRISPRCasFinder 4061972-4062003 32 NZ_CP041205 Rhizobium sp. NIBRBAC000502774 plasmid pMK-2, complete sequence 650614-650645 9 0.719
NZ_CP034938_5 5.9|4061972|32|NZ_CP034938|CRISPRCasFinder 4061972-4062003 32 NZ_CP011248 Agrobacterium tumefaciens strain Ach5 plasmid pAt, complete sequence 464345-464376 9 0.719
NZ_CP034938_5 5.9|4061972|32|NZ_CP034938|CRISPRCasFinder 4061972-4062003 32 NC_015184 Agrobacterium sp. H13-3 plasmid pAspH13-3a, complete sequence 530408-530439 9 0.719
NZ_CP034938_5 5.9|4061972|32|NZ_CP034938|CRISPRCasFinder 4061972-4062003 32 NZ_CP032919 Agrobacterium tumefaciens strain 15955 plasmid pAt15955, complete sequence 735055-735086 9 0.719
NZ_CP034938_5 5.9|4061972|32|NZ_CP034938|CRISPRCasFinder 4061972-4062003 32 NZ_CP033029 Agrobacterium tumefaciens strain A6 plasmid pAtA6, complete sequence 735138-735169 9 0.719
NZ_CP034938_5 5.9|4061972|32|NZ_CP034938|CRISPRCasFinder 4061972-4062003 32 NC_005887 Burkholderia phage BcepC6B, complete genome 29595-29626 9 0.719
NZ_CP034938_5 5.9|4061972|32|NZ_CP034938|CRISPRCasFinder 4061972-4062003 32 AY605181 Burkholderia cepacia complex phage BcepC6B, complete genome 29595-29626 9 0.719
NZ_CP034938_1 1.12|441847|32|NZ_CP034938|PILER-CR,CRISPRCasFinder,CRT 441847-441878 32 NZ_CP049229 Lactobacillus iners strain C0210C1 plasmid pC0210C1, complete sequence 56417-56448 10 0.688
NZ_CP034938_1 1.12|441847|32|NZ_CP034938|PILER-CR,CRISPRCasFinder,CRT 441847-441878 32 NZ_CP049227 Lactobacillus iners strain C0011D1 plasmid pC0011D1, complete sequence 65203-65234 10 0.688
NZ_CP034938_1 1.12|441847|32|NZ_CP034938|PILER-CR,CRISPRCasFinder,CRT 441847-441878 32 NZ_CP049224 Lactobacillus iners strain C0094A1 plasmid pC0094A1, complete sequence 82122-82153 10 0.688
NZ_CP034938_1 1.14|441969|32|NZ_CP034938|PILER-CR,CRISPRCasFinder,CRT 441969-442000 32 NZ_CP021367 Acidovorax carolinensis strain P4 plasmid pACP4.1, complete sequence 118935-118966 10 0.688
NZ_CP034938_1 1.14|441969|32|NZ_CP034938|PILER-CR,CRISPRCasFinder,CRT 441969-442000 32 NZ_CP021363 Acidovorax carolinensis strain P3 plasmid pACP3.1, complete sequence 103827-103858 10 0.688
NZ_CP034938_2 2.1|814499|45|NZ_CP034938|CRISPRCasFinder 814499-814543 45 NZ_CP028350 Pantoea vagans strain PV989 plasmid pPV989-508, complete sequence 450669-450713 11 0.756
NZ_CP034938_2 2.1|814499|45|NZ_CP034938|CRISPRCasFinder 814499-814543 45 NC_014258 Pantoea vagans C9-1 plasmid pPag3, complete sequence 116040-116084 11 0.756

1. spacer 1.9|441664|32|NZ_CP034938|PILER-CR,CRISPRCasFinder,CRT matches to NC_019522 (Pectobacterium phage ZF40, complete genome) position: , mismatch: 0, identity: 1.0

cacgaaaatcgacaacgatttgcgctgtgatt	CRISPR spacer
cacgaaaatcgacaacgatttgcgctgtgatt	Protospacer
********************************

2. spacer 1.6|441481|32|NZ_CP034938|PILER-CR,CRISPRCasFinder,CRT matches to KM389288 (UNVERIFIED: Escherichia phage Phi06_2987 S clone contig00002 genomic sequence) position: , mismatch: 3, identity: 0.906

ttcatgcggttggagcatgcgcattccaatat	CRISPR spacer
ctcatgcggttgcagcatgcgcattccgatat	Protospacer
.*********** **************.****

3. spacer 4.5|4054868|32|NZ_CP034938|PILER-CR,CRISPRCasFinder,CRT matches to MF158038 (Shigella phage Sf11 SMD-2017, complete genome) position: , mismatch: 6, identity: 0.812

gtacccgaatgactgagaagcgccagatgggg	CRISPR spacer
ataagcgaatgactgcgaagcgccagacggcg	Protospacer
.**  ********** ***********.** *

4. spacer 1.8|441603|32|NZ_CP034938|PILER-CR,CRISPRCasFinder,CRT matches to MF415411 (Klebsiella phage KPN U2874, complete genome) position: , mismatch: 7, identity: 0.781

gcagagcagcgtaaaaacctgccccgacgatt	CRISPR spacer
gcactgcagcgtaaaaacctgccaggccgcct	Protospacer
***  ******************  * ** .*

5. spacer 1.8|441603|32|NZ_CP034938|PILER-CR,CRISPRCasFinder,CRT matches to MF476924 (Klebsiella phage YMC15/11/N53_KPN_BP, complete genome) position: , mismatch: 7, identity: 0.781

gcagagcagcgtaaaaacctgccccgacgatt	CRISPR spacer
gcactgcagcgtaaaaacctgccaggccgcct	Protospacer
***  ******************  * ** .*

6. spacer 1.8|441603|32|NZ_CP034938|PILER-CR,CRISPRCasFinder,CRT matches to MF415413 (Klebsiella phage KPN N54, complete genome) position: , mismatch: 7, identity: 0.781

gcagagcagcgtaaaaacctgccccgacgatt	CRISPR spacer
gcactgcagcgtaaaaacctgccaggccgcct	Protospacer
***  ******************  * ** .*

7. spacer 1.8|441603|32|NZ_CP034938|PILER-CR,CRISPRCasFinder,CRT matches to MF415410 (Klebsiella phage KPN N137, complete genome) position: , mismatch: 7, identity: 0.781

gcagagcagcgtaaaaacctgccccgacgatt	CRISPR spacer
gcactgcagcgtaaaaacctgccaggccgcct	Protospacer
***  ******************  * ** .*

8. spacer 1.8|441603|32|NZ_CP034938|PILER-CR,CRISPRCasFinder,CRT matches to MG835858 (Klebsiella phage KPN N98, complete genome) position: , mismatch: 7, identity: 0.781

gcagagcagcgtaaaaacctgccccgacgatt	CRISPR spacer
gcactgcagcgtaaaaacctgccaggccgcct	Protospacer
***  ******************  * ** .*

9. spacer 1.18|442213|32|NZ_CP034938|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011009 (Bacillus simplex strain SH-B26 plasmid pSHB26, complete sequence) position: , mismatch: 7, identity: 0.781

tagagcttattaaagattgggattctcatgat	CRISPR spacer
tagagccttttaaagattgggattatgttaag	Protospacer
******.* *************** *  *.* 

10. spacer 5.7|4061852|32|NZ_CP034938|CRISPRCasFinder,PILER-CR matches to NC_009955 (Dinoroseobacter shibae DFL 12 = DSM 16493 plasmid pDSHI01, complete sequence) position: , mismatch: 7, identity: 0.781

caattccatcgagagtgtcggcgatcatctct	CRISPR spacer
ggtttccgtcgagaatgtcggcgatcatcacc	Protospacer
 . ****.******.************** *.

11. spacer 5.7|4061852|32|NZ_CP034938|CRISPRCasFinder,PILER-CR matches to NZ_CP038146 (Streptomyces sp. S501 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

caattccatcgagagtgtcggcgatcatctct	CRISPR spacer
gcatcgaatcgagagtgtcggcgatcttctcg	Protospacer
  **.  ******************* **** 

12. spacer 4.3|4054748|32|NZ_CP034938|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045296 (Paenibacillus cellulositrophicus strain KACC 16577 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

acacacccacgatgtcctgatacgcggacagt	CRISPR spacer
tcccgttcaagatgtcctgataagcggacaga	Protospacer
 * *...** ************ ******** 

13. spacer 4.6|4054928|32|NZ_CP034938|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032696 (Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525b, complete sequence) position: , mismatch: 8, identity: 0.75

attcggcgctaatgtaatgcc----tgctgctgtgg	CRISPR spacer
gttcggcgctaatgtcatgccagcttgccact----	Protospacer
.************** *****    ***..**    

14. spacer 5.5|4061732|32|NZ_CP034938|CRISPRCasFinder,PILER-CR matches to NZ_AP019553 (Athalassotoga saccharophila strain NAS-01 plasmid pATS2, complete sequence) position: , mismatch: 8, identity: 0.75

aattatccgacgtgacagcttgtaatcttttg	CRISPR spacer
aacggtggaacgtgacaggttgaaatcttttg	Protospacer
**. .*  .********* *** *********

15. spacer 5.8|4061912|32|NZ_CP034938|CRISPRCasFinder,PILER-CR matches to MF417904 (Uncultured Caudovirales phage clone 10S_9, partial genome) position: , mismatch: 8, identity: 0.75

gatggcgttctgtttacgggcttggtctatta	CRISPR spacer
aatggctttctgtttacgagcttgcacccttg	Protospacer
.***** ***********.*****  *. **.

16. spacer 1.4|441359|32|NZ_CP034938|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039425 (Citricoccus sp. SGAir0253 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

cactggcaactcaccgactcccagcacaatgt	CRISPR spacer
cactggcaactcacccacccccacaccggcga	Protospacer
*************** **.****   *...* 

17. spacer 1.4|441359|32|NZ_CP034938|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039430 (Citricoccus sp. SGAir0453 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

cactggcaactcaccgactcccagcacaatgt	CRISPR spacer
cactggcaactcacccacccccacaccggcga	Protospacer
*************** **.****   *...* 

18. spacer 1.10|441725|32|NZ_CP034938|PILER-CR,CRISPRCasFinder,CRT matches to MK962629 (Achromobacter phage vB_AxyP_19-32_Axy10, complete genome) position: , mismatch: 9, identity: 0.719

catcgtcggcggtgttgtaactggcgtgggag	CRISPR spacer
ggtcgtcggcggtgtggtgactggcaaggctc	Protospacer
 .************* **.******. **   

19. spacer 1.12|441847|32|NZ_CP034938|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KX711616 (Bacillus subtilis strain 72 plasmid pBS72, complete sequence) position: , mismatch: 9, identity: 0.719

caaatttaaatctctttgggtataacagcttt	CRISPR spacer
actatccttatcactttgggcataacagcttt	Protospacer
   **..  *** *******.***********

20. spacer 5.4|4061672|32|NZ_CP034938|CRISPRCasFinder,PILER-CR matches to NZ_CP017942 (Phyllobacterium zundukense strain Tri-48 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

gcgttgatggcattgagcgggcggaaaacgag	CRISPR spacer
aaacggatggcattgagcggccggagaaagtg	Protospacer
. .. *************** ****.** * *

21. spacer 5.6|4061792|32|NZ_CP034938|CRISPRCasFinder,PILER-CR matches to NZ_CP043499 (Rhizobium grahamii strain BG7 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ttgattccatcaaatcagtctggttgccggac	CRISPR spacer
accgggccatggaatcagtctggttgccgggc	Protospacer
 . .  **** .******************.*

22. spacer 5.7|4061852|32|NZ_CP034938|CRISPRCasFinder,PILER-CR matches to NC_012852 (Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132504, complete sequence) position: , mismatch: 9, identity: 0.719

caattccatcgagagtgtcggcgatcatctct	CRISPR spacer
caattccatcgacaatgtcggcgtcggcatcc	Protospacer
************ *.******** . .. **.

23. spacer 5.7|4061852|32|NZ_CP034938|CRISPRCasFinder,PILER-CR matches to NZ_CP048283 (Rhizobium leguminosarum bv. viciae 248 plasmid pRle248c, complete sequence) position: , mismatch: 9, identity: 0.719

caattccatcgagagtgtcggcgatcatctct	CRISPR spacer
caattccatcgacaatgtcggcgtcggcatcc	Protospacer
************ *.******** . .. **.

24. spacer 5.9|4061972|32|NZ_CP034938|CRISPRCasFinder matches to NZ_CP041205 (Rhizobium sp. NIBRBAC000502774 plasmid pMK-2, complete sequence) position: , mismatch: 9, identity: 0.719

acgaagacgaatggcgggaagatttcgacgct	CRISPR spacer
agattgtcgaatggcgggactatttcgacgta	Protospacer
* .  * ************  *********. 

25. spacer 5.9|4061972|32|NZ_CP034938|CRISPRCasFinder matches to NZ_CP011248 (Agrobacterium tumefaciens strain Ach5 plasmid pAt, complete sequence) position: , mismatch: 9, identity: 0.719

acgaagacgaatggcgggaagatttcgacgct	CRISPR spacer
agattgtcgaatggcgggactatttcgacgta	Protospacer
* .  * ************  *********. 

26. spacer 5.9|4061972|32|NZ_CP034938|CRISPRCasFinder matches to NC_015184 (Agrobacterium sp. H13-3 plasmid pAspH13-3a, complete sequence) position: , mismatch: 9, identity: 0.719

acgaagacgaatggcgggaagatttcgacgct	CRISPR spacer
agattgtcgaatggcgggactatttcgacgta	Protospacer
* .  * ************  *********. 

27. spacer 5.9|4061972|32|NZ_CP034938|CRISPRCasFinder matches to NZ_CP032919 (Agrobacterium tumefaciens strain 15955 plasmid pAt15955, complete sequence) position: , mismatch: 9, identity: 0.719

acgaagacgaatggcgggaagatttcgacgct	CRISPR spacer
agattgtcgaatggcgggactatttcgacgta	Protospacer
* .  * ************  *********. 

28. spacer 5.9|4061972|32|NZ_CP034938|CRISPRCasFinder matches to NZ_CP033029 (Agrobacterium tumefaciens strain A6 plasmid pAtA6, complete sequence) position: , mismatch: 9, identity: 0.719

acgaagacgaatggcgggaagatttcgacgct	CRISPR spacer
agattgtcgaatggcgggactatttcgacgta	Protospacer
* .  * ************  *********. 

29. spacer 5.9|4061972|32|NZ_CP034938|CRISPRCasFinder matches to NC_005887 (Burkholderia phage BcepC6B, complete genome) position: , mismatch: 9, identity: 0.719

acgaagacgaatggcgggaagatttcgacgct	CRISPR spacer
acgaagacgtacggcgggaagatcttcgagaa	Protospacer
********* *.***********.*. . *  

30. spacer 5.9|4061972|32|NZ_CP034938|CRISPRCasFinder matches to AY605181 (Burkholderia cepacia complex phage BcepC6B, complete genome) position: , mismatch: 9, identity: 0.719

acgaagacgaatggcgggaagatttcgacgct	CRISPR spacer
acgaagacgtacggcgggaagatcttcgagaa	Protospacer
********* *.***********.*. . *  

31. spacer 1.12|441847|32|NZ_CP034938|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049229 (Lactobacillus iners strain C0210C1 plasmid pC0210C1, complete sequence) position: , mismatch: 10, identity: 0.688

caaatttaaatctctttgggtataacagcttt	CRISPR spacer
ataatttaaatctctttgagaataatttgact	Protospacer
  ****************.* ****.    .*

32. spacer 1.12|441847|32|NZ_CP034938|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049227 (Lactobacillus iners strain C0011D1 plasmid pC0011D1, complete sequence) position: , mismatch: 10, identity: 0.688

caaatttaaatctctttgggtataacagcttt	CRISPR spacer
ataatttaaatctctttgagaataatttgact	Protospacer
  ****************.* ****.    .*

33. spacer 1.12|441847|32|NZ_CP034938|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049224 (Lactobacillus iners strain C0094A1 plasmid pC0094A1, complete sequence) position: , mismatch: 10, identity: 0.688

caaatttaaatctctttgggtataacagcttt	CRISPR spacer
ataatttaaatctctttgagaataatttgact	Protospacer
  ****************.* ****.    .*

34. spacer 1.14|441969|32|NZ_CP034938|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021367 (Acidovorax carolinensis strain P4 plasmid pACP4.1, complete sequence) position: , mismatch: 10, identity: 0.688

cgttatctctttcagagatttgccgtttcgat	CRISPR spacer
aaaggcctcttccagggatttgccgtttccgt	Protospacer
 .  ..*****.***.************* .*

35. spacer 1.14|441969|32|NZ_CP034938|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021363 (Acidovorax carolinensis strain P3 plasmid pACP3.1, complete sequence) position: , mismatch: 10, identity: 0.688

cgttatctctttcagagatttgccgtttcgat	CRISPR spacer
aaaggcctcttccagggatttgccgtttccgt	Protospacer
 .  ..*****.***.************* .*

36. spacer 2.1|814499|45|NZ_CP034938|CRISPRCasFinder matches to NZ_CP028350 (Pantoea vagans strain PV989 plasmid pPV989-508, complete sequence) position: , mismatch: 11, identity: 0.756

cgcaggagcgattttcaacaacgcaaagcgttggcccagaggggc	CRISPR spacer
gccgggagcgtttttgaacaacgcaaagcgttggcccgggaacgg	Protospacer
  *.****** **** *********************.*... * 

37. spacer 2.1|814499|45|NZ_CP034938|CRISPRCasFinder matches to NC_014258 (Pantoea vagans C9-1 plasmid pPag3, complete sequence) position: , mismatch: 11, identity: 0.756

cgcaggagcgattttcaacaacgcaaagcgttggcccagaggggc	CRISPR spacer
gccgggagcgtttttgaacaacgcaaagcgttggcccgggaacgg	Protospacer
  *.****** **** *********************.*... * 

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 2703151 : 2748552 55 Escherichia_phage(39.47%) plate,terminase,tail,holin,integrase attL 2695076:2695091|attR 2753338:2753353
DBSCAN-SWA_2 2997225 : 3082199 92 Burkholderia_phage(23.33%) plate,transposase,tRNA,protease,tail,integrase attL 3017626:3017640|attR 3025733:3025747
DBSCAN-SWA_3 3293906 : 3362284 57 Brazilian_cedratvirus(11.11%) plate,transposase,coat,tRNA,integrase attL 3332397:3332423|attR 3362286:3362312
DBSCAN-SWA_4 3647211 : 3740141 92 Escherichia_phage(20.83%) plate,terminase,portal,transposase,head,tRNA,capsid,tail,lysis,integrase attL 3692372:3692422|attR 3727953:3728003
DBSCAN-SWA_5 3793352 : 3822315 25 Acanthocystis_turfacea_Chlorella_virus(20.0%) plate,transposase,integrase attL 3813725:3813743|attR 3822497:3822515
DBSCAN-SWA_6 4826271 : 4911827 84 Pseudomonas_phage(33.33%) plate,terminase,transposase,head,capsid,tRNA,tail,integrase attL 4821397:4821413|attR 4836260:4836276
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage