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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP034387 Escherichia coli O157:H7 strain FRIK804 plasmid pFRIK804-02, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP034388 Escherichia coli O157:H7 strain FRIK804 plasmid pFRIK804-03, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP034386 Escherichia coli O157:H7 strain FRIK804 plasmid pFRIK804-01, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP034385 Escherichia coli O157:H7 strain FRIK804 plasmid pO157, complete sequence 0 crisprs RT 0 0 1 0
NZ_CP034384 Escherichia coli O157:H7 strain FRIK804 chromosome, complete genome 6 crisprs DinG,PrimPol,cas3,DEDDh,c2c9_V-U4,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK 0 7 14 0

Results visualization

1. NZ_CP034385
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 25339 : 37998 13 Macacine_betaherpesvirus(50.0%) integrase,transposase attL 16524:16538|attR 39771:39785
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP034384
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP034384_1 71496-71630 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP034384_2 1801644-1801793 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP034384_3 2001567-2001690 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP034384_4 3692747-3692959 TypeI-E I-E
3 spacers
cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP034384_5 3718650-3718738 Unclear I-E
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP034384_6 5395645-5395794 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP034384_4 4.3|3692898|32|NZ_CP034384|CRISPRCasFinder 3692898-3692929 32 MK047640 Phage NV18, complete genome 15645-15676 1 0.969
NZ_CP034384_4 4.6|3692899|31|NZ_CP034384|CRT,PILER-CR 3692899-3692929 31 MK047640 Phage NV18, complete genome 15646-15676 1 0.968
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 101196-101230 2 0.943
NZ_CP034384_3 3.1|2001610|38|NZ_CP034384|CRISPRCasFinder 2001610-2001647 38 NZ_CP043437 Enterobacter sp. LU1 plasmid unnamed 113727-113764 2 0.947
NZ_CP034384_4 4.3|3692898|32|NZ_CP034384|CRISPRCasFinder 3692898-3692929 32 MF417881 Uncultured Caudovirales phage clone 7AX_3, partial genome 2718-2749 2 0.938
NZ_CP034384_4 4.6|3692899|31|NZ_CP034384|CRT,PILER-CR 3692899-3692929 31 MF417881 Uncultured Caudovirales phage clone 7AX_3, partial genome 2718-2748 2 0.935
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 165464-165498 3 0.914
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_CP048307 Escherichia coli strain 9 plasmid p009_C, complete sequence 14239-14273 5 0.857
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_CP044308 Escherichia coli strain C27A plasmid pC27A-3, complete sequence 56080-56114 5 0.857
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 6804-6838 6 0.829
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 208981-209015 6 0.829
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 219475-219509 6 0.829
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 210309-210343 6 0.829
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 191264-191298 6 0.829
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_CP010208 Escherichia coli strain M11 plasmid B, complete sequence 30177-30211 6 0.829
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 MT230312 Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence 170-204 6 0.829
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_AP023209 Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence 88-122 6 0.829
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 87137-87171 7 0.8
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 138033-138067 7 0.8
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 43-77 7 0.8
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 3372-3406 7 0.8
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 208887-208921 7 0.8
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 42-76 7 0.8
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 3371-3405 7 0.8
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 219381-219415 7 0.8
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 42-76 7 0.8
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 3371-3405 7 0.8
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 210215-210249 7 0.8
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 42-76 7 0.8
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 3371-3405 7 0.8
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 191170-191204 7 0.8
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_CP010208 Escherichia coli strain M11 plasmid B, complete sequence 27246-27280 7 0.8
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_CP044307 Escherichia coli strain C27A plasmid pC27A-2, complete sequence 18350-18384 7 0.8
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_CP044307 Escherichia coli strain C27A plasmid pC27A-2, complete sequence 15018-15052 7 0.8
NZ_CP034384_4 4.4|3692777|31|NZ_CP034384|CRT 3692777-3692807 31 NC_015512 Haliscomenobacter hydrossis DSM 1100 plasmid pHALHY02, complete sequence 90200-90230 7 0.774
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 61916-61950 8 0.771
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 4114-4148 8 0.771
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 229148-229182 8 0.771
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 229249-229283 8 0.771
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 229350-229384 8 0.771
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 229451-229485 8 0.771
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 203852-203886 8 0.771
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 204038-204072 8 0.771
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 204131-204165 8 0.771
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 4113-4147 8 0.771
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 239642-239676 8 0.771
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 239743-239777 8 0.771
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 239844-239878 8 0.771
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 239945-239979 8 0.771
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 214346-214380 8 0.771
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 214532-214566 8 0.771
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 214625-214659 8 0.771
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 4113-4147 8 0.771
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 230554-230588 8 0.771
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 230655-230689 8 0.771
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 230756-230790 8 0.771
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 230857-230891 8 0.771
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 205180-205214 8 0.771
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 205366-205400 8 0.771
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 205459-205493 8 0.771
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 4113-4147 8 0.771
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 211524-211558 8 0.771
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 211625-211659 8 0.771
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 211726-211760 8 0.771
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 211827-211861 8 0.771
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 186135-186169 8 0.771
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 186321-186355 8 0.771
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 186414-186448 8 0.771
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_CP044307 Escherichia coli strain C27A plasmid pC27A-2, complete sequence 14272-14306 8 0.771
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_CP044147 Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2 6744-6778 8 0.771
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_CP044147 Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2 7392-7426 8 0.771
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 CP044351 Escherichia coli strain 194195 plasmid p194195_1, complete sequence 83590-83624 8 0.771
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 CP044351 Escherichia coli strain 194195 plasmid p194195_1, complete sequence 84216-84250 8 0.771
NZ_CP034384_2 2.1|1801697|44|NZ_CP034384|CRISPRCasFinder 1801697-1801740 44 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 210148-210191 8 0.818
NZ_CP034384_4 4.1|3692776|32|NZ_CP034384|CRISPRCasFinder 3692776-3692807 32 NC_015512 Haliscomenobacter hydrossis DSM 1100 plasmid pHALHY02, complete sequence 90200-90231 8 0.75
NZ_CP034384_4 4.6|3692899|31|NZ_CP034384|CRT,PILER-CR 3692899-3692929 31 NC_011370 Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG203, complete sequence 102901-102931 8 0.742
NZ_CP034384_4 4.6|3692899|31|NZ_CP034384|CRT,PILER-CR 3692899-3692929 31 NZ_CP032697 Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525a, complete sequence 313484-313514 8 0.742
NZ_CP034384_4 4.6|3692899|31|NZ_CP034384|CRT,PILER-CR 3692899-3692929 31 NZ_CP049249 Rhizobium rhizoryzae strain DSM 29514 plasmid unnamed3, complete sequence 984473-984503 8 0.742
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 386558-386592 9 0.743
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 4013-4047 9 0.743
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 4012-4046 9 0.743
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 4012-4046 9 0.743
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 4012-4046 9 0.743
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_CP044308 Escherichia coli strain C27A plasmid pC27A-3, complete sequence 13988-14022 9 0.743
NZ_CP034384_1 1.1|71546|35|NZ_CP034384|CRISPRCasFinder 71546-71580 35 NZ_CP019246 Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence 41415-41449 9 0.743
NZ_CP034384_4 4.3|3692898|32|NZ_CP034384|CRISPRCasFinder 3692898-3692929 32 NC_011370 Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG203, complete sequence 102900-102931 9 0.719
NZ_CP034384_4 4.3|3692898|32|NZ_CP034384|CRISPRCasFinder 3692898-3692929 32 NZ_CP032697 Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525a, complete sequence 313483-313514 9 0.719
NZ_CP034384_4 4.3|3692898|32|NZ_CP034384|CRISPRCasFinder 3692898-3692929 32 NZ_CP049249 Rhizobium rhizoryzae strain DSM 29514 plasmid unnamed3, complete sequence 984472-984503 9 0.719

1. spacer 4.3|3692898|32|NZ_CP034384|CRISPRCasFinder matches to MK047640 (Phage NV18, complete genome) position: , mismatch: 1, identity: 0.969

tttggtgacagtttttgtcactgttttggtga	CRISPR spacer
tttggtgacactttttgtcactgttttggtga	Protospacer
********** *********************

2. spacer 4.6|3692899|31|NZ_CP034384|CRT,PILER-CR matches to MK047640 (Phage NV18, complete genome) position: , mismatch: 1, identity: 0.968

ttggtgacagtttttgtcactgttttggtga	CRISPR spacer
ttggtgacactttttgtcactgttttggtga	Protospacer
********* *********************

3. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 2, identity: 0.943

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgccagcgtcgcatcaggcgctgaa	Protospacer
 ***********.**********************

4. spacer 3.1|2001610|38|NZ_CP034384|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 2, identity: 0.947

cggacgcaggatggtgcgttcaattggactcgaaccaa	CRISPR spacer
cagacgcagaatggtgcgttcaattggactcgaaccaa	Protospacer
*.*******.****************************

5. spacer 4.3|3692898|32|NZ_CP034384|CRISPRCasFinder matches to MF417881 (Uncultured Caudovirales phage clone 7AX_3, partial genome) position: , mismatch: 2, identity: 0.938

tttggtgacagtttttgtcactgttttggtga	CRISPR spacer
tttggtgacactttttgtcactgatttggtga	Protospacer
********** ************ ********

6. spacer 4.6|3692899|31|NZ_CP034384|CRT,PILER-CR matches to MF417881 (Uncultured Caudovirales phage clone 7AX_3, partial genome) position: , mismatch: 2, identity: 0.935

ttggtgacagtttttgtcactgttttggtga	CRISPR spacer
ttggtgacactttttgtcactgatttggtga	Protospacer
********* ************ ********

7. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 3, identity: 0.914

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
agataagacgcgtcagcgtcgcatcaggcgttaca	Protospacer
******************************.*. *

8. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 5, identity: 0.857

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgacagcggcgcatcaggcgctggt	Protospacer
 *********** ***** **************. 

9. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 5, identity: 0.857

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
cgctaagacgcgccagcgtcgcatcaggcgttgag	Protospacer
 * *********.*****************.***.

10. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 6, identity: 0.829

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
agataagacgcgtcagcgtcgcatctggcataaac	Protospacer
************************* ***.. .* 

11. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 6, identity: 0.829

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgtcagcgtcgcatcaggcatctga	Protospacer
 ****************************... .*

12. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 6, identity: 0.829

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgtcagcgtcgcatcaggcatctga	Protospacer
 ****************************... .*

13. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 6, identity: 0.829

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgtcagcgtcgcatcaggcatctga	Protospacer
 ****************************... .*

14. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 6, identity: 0.829

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgtcagcgtcgcatcaggcatctga	Protospacer
 ****************************... .*

15. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 6, identity: 0.829

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgtcagcgtcgcatcaggcatcaga	Protospacer
 ****************************.....*

16. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to MT230312 (Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence) position: , mismatch: 6, identity: 0.829

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgtcagcgtcgcatcaggcttcaat	Protospacer
 **************************** ...* 

17. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_AP023209 (Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence) position: , mismatch: 6, identity: 0.829

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgtcagcgtcgcatcaggcatcggc	Protospacer
 ****************************...*. 

18. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 7, identity: 0.8

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcggcagcgtcgcatcaggcatcgtg	Protospacer
 *********** ****************...* .

19. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 7, identity: 0.8

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcattagcgtcgcatcaggcagcgca	Protospacer
 **********.*.***************. .* *

20. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 7, identity: 0.8

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgtcagcgtcgcatcaggcatcagc	Protospacer
 ****************************..... 

21. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 7, identity: 0.8

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgccagcgtcgcatcaggcacctgc	Protospacer
 ***********.****************.*. . 

22. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 7, identity: 0.8

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataaaacgcgtcagcgtcgcatcaggcatcggc	Protospacer
 *****.**********************...*. 

23. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 7, identity: 0.8

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgtcagcgtcgcatcaggcatcagc	Protospacer
 ****************************..... 

24. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 7, identity: 0.8

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgccagcgtcgcatcaggcacctgc	Protospacer
 ***********.****************.*. . 

25. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 7, identity: 0.8

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataaaacgcgtcagcgtcgcatcaggcatcggc	Protospacer
 *****.**********************...*. 

26. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 7, identity: 0.8

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgtcagcgtcgcatcaggcatcagc	Protospacer
 ****************************..... 

27. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 7, identity: 0.8

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgccagcgtcgcatcaggcacctgc	Protospacer
 ***********.****************.*. . 

28. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 7, identity: 0.8

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataaaacgcgtcagcgtcgcatcaggcatcggc	Protospacer
 *****.**********************...*. 

29. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 7, identity: 0.8

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgtcagcgtcgcatcaggcatcagc	Protospacer
 ****************************..... 

30. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 7, identity: 0.8

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgccagcgtcgcatcaggcacctgc	Protospacer
 ***********.****************.*. . 

31. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 7, identity: 0.8

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataaaacgcgtcagcgtcgcatcaggcatcggc	Protospacer
 *****.**********************...*. 

32. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 7, identity: 0.8

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgtctgcgtcgcatctggcaccggt	Protospacer
 ************* ********** ***.*.*. 

33. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_CP044307 (Escherichia coli strain C27A plasmid pC27A-2, complete sequence) position: , mismatch: 7, identity: 0.8

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgtcagcgtcgcatcaggcatcagc	Protospacer
 ****************************..... 

34. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_CP044307 (Escherichia coli strain C27A plasmid pC27A-2, complete sequence) position: , mismatch: 7, identity: 0.8

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgccagcgtcgcatcaggcacctgg	Protospacer
 ***********.****************.*. ..

35. spacer 4.4|3692777|31|NZ_CP034384|CRT matches to NC_015512 (Haliscomenobacter hydrossis DSM 1100 plasmid pHALHY02, complete sequence) position: , mismatch: 7, identity: 0.774

gcggcacgctggattgaacaaat---ccctgggc	CRISPR spacer
gcggcacgatgggttgaacaaatggactttg---	Protospacer
******** ***.**********   *..**   

36. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
agataagacgcgccagcgtcgcatctggcatctgc	Protospacer
************.************ ***... . 

37. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgccagcgtcgcatcaggcatctgc	Protospacer
 ***********.****************... . 

38. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
 ************.***************... . 

39. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
 ************.***************... . 

40. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
 ************.***************... . 

41. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
 ************.***************... . 

42. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagtcgcgtcagcgacgcatcaggcatcggc	Protospacer
 ****** ********** **********...*. 

43. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagtcgcgtcagcggcgcatcaggcatcggt	Protospacer
 ****** ********** **********...*. 

44. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagtcgcgtcagcggcgcatcaggcatcggt	Protospacer
 ****** ********** **********...*. 

45. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgccagcgtcgcatcaggcatctgc	Protospacer
 ***********.****************... . 

46. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
 ************.***************... . 

47. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
 ************.***************... . 

48. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
 ************.***************... . 

49. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
 ************.***************... . 

50. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagtcgcgtcagcgacgcatcaggcatcggc	Protospacer
 ****** ********** **********...*. 

51. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagtcgcgtcagcggcgcatcaggcatcggt	Protospacer
 ****** ********** **********...*. 

52. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagtcgcgtcagcggcgcatcaggcatcggt	Protospacer
 ****** ********** **********...*. 

53. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgccagcgtcgcatcaggcatctgc	Protospacer
 ***********.****************... . 

54. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
 ************.***************... . 

55. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
 ************.***************... . 

56. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
 ************.***************... . 

57. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
 ************.***************... . 

58. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagtcgcgtcagcgacgcatcaggcatcggc	Protospacer
 ****** ********** **********...*. 

59. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagtcgcgtcagcggcgcatcaggcatcggt	Protospacer
 ****** ********** **********...*. 

60. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagtcgcgtcagcggcgcatcaggcatcggt	Protospacer
 ****** ********** **********...*. 

61. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgccagcgtcgcatcaggcatctgc	Protospacer
 ***********.****************... . 

62. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
 ************.***************... . 

63. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
 ************.***************... . 

64. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
 ************.***************... . 

65. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
 ************.***************... . 

66. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagtcgcgtcagcgacgcatcaggcatcggc	Protospacer
 ****** ********** **********...*. 

67. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagtcgcgtcagcggcgcatcaggcatcggt	Protospacer
 ****** ********** **********...*. 

68. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagtcgcgtcagcggcgcatcaggcatcggt	Protospacer
 ****** ********** **********...*. 

69. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_CP044307 (Escherichia coli strain C27A plasmid pC27A-2, complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagatgcgccagcgtcgcatcaggtaattca	Protospacer
 *******.***.***************.. *  *

70. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_CP044147 (Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgtcagcgtcgtatcaggcatctgc	Protospacer
 ********************.*******... . 

71. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_CP044147 (Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgccagcgtcgcatcaggcatccgg	Protospacer
 ***********.****************... ..

72. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to CP044351 (Escherichia coli strain 194195 plasmid p194195_1, complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgtcagcgtcgtatcaggcatctgc	Protospacer
 ********************.*******... . 

73. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to CP044351 (Escherichia coli strain 194195 plasmid p194195_1, complete sequence) position: , mismatch: 8, identity: 0.771

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgccagcgtcgcatcaggcatccgg	Protospacer
 ***********.****************... ..

74. spacer 2.1|1801697|44|NZ_CP034384|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 8, identity: 0.818

ttggcagtgtgcctgatgcgacgctgttcgcgtcttaccaggcc	CRISPR spacer
tgcacaagatgcctgatgcgacgctgtccgcgtcttatcaggcc	Protospacer
*  .**. .******************.*********.******

75. spacer 4.1|3692776|32|NZ_CP034384|CRISPRCasFinder matches to NC_015512 (Haliscomenobacter hydrossis DSM 1100 plasmid pHALHY02, complete sequence) position: , mismatch: 8, identity: 0.75

agcggcacgctggattgaacaaat---ccctgggc	CRISPR spacer
tgcggcacgatgggttgaacaaatggactttg---	Protospacer
 ******** ***.**********   *..**   

76. spacer 4.6|3692899|31|NZ_CP034384|CRT,PILER-CR matches to NC_011370 (Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG203, complete sequence) position: , mismatch: 8, identity: 0.742

ttggtgacagtttttgtcactgttttggtga	CRISPR spacer
cagtcaagagtctttggcactgttttggtga	Protospacer
. * ..* ***.**** **************

77. spacer 4.6|3692899|31|NZ_CP034384|CRT,PILER-CR matches to NZ_CP032697 (Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525a, complete sequence) position: , mismatch: 8, identity: 0.742

ttggtgacagtttttgtcactgttttggtga	CRISPR spacer
cagtcaagagtctttggcactgttttggtga	Protospacer
. * ..* ***.**** **************

78. spacer 4.6|3692899|31|NZ_CP034384|CRT,PILER-CR matches to NZ_CP049249 (Rhizobium rhizoryzae strain DSM 29514 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.742

ttggtgacagtttttgtcactgttttggtga	CRISPR spacer
cagtcaagagtttttggcaccgttttggtga	Protospacer
. * ..* ******** ***.**********

79. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.743

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgttagcatcgcatcaggcatcagc	Protospacer
 ************.***.***********..... 

80. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.743

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgctagcgtcgcatcaggcatctgc	Protospacer
 ***********..***************... . 

81. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.743

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgctagcgtcgcatcaggcatctgc	Protospacer
 ***********..***************... . 

82. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.743

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgctagcgtcgcatcaggcatctgc	Protospacer
 ***********..***************... . 

83. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.743

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgctagcgtcgcatcaggcatctgc	Protospacer
 ***********..***************... . 

84. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 9, identity: 0.743

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
cgataagacgcgccagcgtcgcatcgggcatccgt	Protospacer
 ***********.************.***... . 

85. spacer 1.1|71546|35|NZ_CP034384|CRISPRCasFinder matches to NZ_CP019246 (Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence) position: , mismatch: 9, identity: 0.743

agataagacgcgtcagcgtcgcatcaggcgctgaa	CRISPR spacer
tgataagacgcgccagcgtcgcatcagacatcagc	Protospacer
 ***********.**************.*..... 

86. spacer 4.3|3692898|32|NZ_CP034384|CRISPRCasFinder matches to NC_011370 (Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG203, complete sequence) position: , mismatch: 9, identity: 0.719

tttggtgacagtttttgtcactgttttggtga	CRISPR spacer
acagtcaagagtctttggcactgttttggtga	Protospacer
 . * ..* ***.**** **************

87. spacer 4.3|3692898|32|NZ_CP034384|CRISPRCasFinder matches to NZ_CP032697 (Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525a, complete sequence) position: , mismatch: 9, identity: 0.719

tttggtgacagtttttgtcactgttttggtga	CRISPR spacer
gcagtcaagagtctttggcactgttttggtga	Protospacer
 . * ..* ***.**** **************

88. spacer 4.3|3692898|32|NZ_CP034384|CRISPRCasFinder matches to NZ_CP049249 (Rhizobium rhizoryzae strain DSM 29514 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

tttggtgacagtttttgtcactgttttggtga	CRISPR spacer
gcagtcaagagtttttggcaccgttttggtga	Protospacer
 . * ..* ******** ***.**********

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 199890 : 311987 99 Enterobacteria_phage(20.69%) protease,tRNA,plate,integrase,tail,transposase attL 276169:276183|attR 312403:312417
DBSCAN-SWA_2 409367 : 450309 59 Shigella_phage(55.0%) protease,head,plate,integrase,tail,transposase attL 405699:405714|attR 422920:422935
DBSCAN-SWA_3 929789 : 967886 50 Enterobacteria_phage(51.16%) protease,portal,integrase,tail,lysis,terminase,holin attL 919231:919245|attR 951521:951535
DBSCAN-SWA_4 1241716 : 1406244 189 Escherichia_phage(32.31%) protease,head,portal,bacteriocin,integrase,tail,capsid,terminase,holin,transposase attL 1275562:1275588|attR 1364757:1364783
DBSCAN-SWA_5 1465695 : 1505575 36 Stx2-converting_phage(36.36%) integrase,protease,transposase attL 1459865:1459880|attR 1477765:1477780
DBSCAN-SWA_6 1635030 : 1677152 54 Escherichia_phage(36.36%) head,portal,integrase,tail,terminase,holin,transposase attL 1628354:1628374|attR 1648803:1648823
DBSCAN-SWA_7 1734731 : 1754714 28 Enterobacteria_phage(75.0%) integrase,tail,transposase attL 1747850:1747863|attR 1757856:1757869
DBSCAN-SWA_8 2075259 : 2190822 139 Escherichia_phage(28.7%) protease,head,portal,tail,capsid,terminase,holin,transposase NA
DBSCAN-SWA_9 2365326 : 2429868 71 Escherichia_phage(44.44%) head,tRNA,integrase,tail,capsid,terminase,holin,transposase attL 2361784:2361799|attR 2422204:2422219
DBSCAN-SWA_10 2507989 : 2583425 81 Stx2-converting_phage(36.54%) protease,head,integrase,tail,capsid,terminase,holin,transposase attL 2523490:2523517|attR 2583562:2583589
DBSCAN-SWA_11 2629827 : 2799916 197 Enterobacteria_phage(32.48%) protease,head,portal,tRNA,integrase,tail,capsid,lysis,terminase,holin,transposase attL 2662537:2662552|attR 2787458:2787472
DBSCAN-SWA_12 2932943 : 3039446 119 Enterobacteria_phage(60.24%) protease,portal,tRNA,integrase,tail,terminase,holin,transposase attL 2987764:2987784|attR 3036952:3036972
DBSCAN-SWA_13 3286378 : 3291765 6 Enterobacteria_phage(50.0%) integrase attL 3276829:3276845|attR 3288793:3288809
DBSCAN-SWA_14 3532167 : 3585771 55 Enterobacteria_phage(28.57%) holin,tRNA,tail,transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage