CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
NZ_CP045131	Acinetobacter indicus strain TQ18 chromosome, complete genome	0 crisprs	csa3,cas14j,c2c9_V-U4,cas3,WYL,DEDDh,TnsE_C	6
NZ_CP045132	Acinetobacter indicus strain TQ18 plasmid p18TQ-X3, complete sequence	0 crisprs	NA	1
NZ_CP045134	Acinetobacter indicus strain TQ18 plasmid p18TQ-13k, complete sequence	0 crisprs	NA	0
NZ_CP045133	Acinetobacter indicus strain TQ18 plasmid p18TQ-NDM, complete sequence	0 crisprs	NA	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

187217 : 231934

Enterobacteria_phage(40.0%)

transposase,integrase

attL 174438:174453|attR 235208:235223

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
174438:174453	attL	NA	NA	NA	NA
WP_171431572.1\|187217_188444_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_160242725.1\|188436_189993_+\|integrase	site-specific integrase	NA	NA	NA	NA
WP_160242726.1\|189985_192109_+\|integrase	integrase	NA	NA	NA	NA
WP_104988039.1\|192110_192530_+	hypothetical protein	NA	NA	NA	NA
WP_101162032.1\|192606_193143_-	hypothetical protein	NA	NA	NA	NA
WP_019385588.1\|193191_193407_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_005180724.1\|194649_194871_-	hypothetical protein	NA	NA	NA	NA
WP_160242727.1\|194894_195815_-	copper resistance protein B	NA	NA	NA	NA
WP_160242728.1\|195801_197715_-	copper resistance system multicopper oxidase	NA	NA	NA	NA
WP_045796009.1\|197804_198101_-	hypothetical protein	NA	NA	NA	NA
WP_005180717.1\|198249_198930_+	heavy metal response regulator transcription factor	NA	NA	NA	NA
WP_160242729.1\|198922_200323_+	heavy metal sensor histidine kinase	NA	NA	NA	NA
WP_160242730.1\|200361_201645_-	DUF4010 domain-containing protein	NA	NA	NA	NA
WP_160242731.1\|201641_204017_-	heavy metal translocating P-type ATPase	A0A218MNH6	uncultured_virus	3.5e-94	36.5
WP_160242732.1\|204028_204679_-	isoprenylcysteine carboxylmethyltransferase family protein	NA	NA	NA	NA
WP_004695740.1\|204699_204948_-	DUF2933 domain-containing protein	NA	NA	NA	NA
WP_004695737.1\|204974_205406_-	hypothetical protein	NA	NA	NA	NA
WP_004281876.1\|206131_206374_-	DUF2789 domain-containing protein	NA	NA	NA	NA
WP_004681441.1\|206725_207106_+	copper resistance protein CopC	NA	NA	NA	NA
WP_005180708.1\|207170_208052_+	CopD family protein	NA	NA	NA	NA
WP_004281879.1\|208520_208715_+	heavy-metal-associated domain-containing protein	NA	NA	NA	NA
WP_160243674.1\|211741_212674_-\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	6.7e-57	41.5
WP_034583971.1\|213750_215562_+	copper resistance system multicopper oxidase	NA	NA	NA	NA
WP_160242733.1\|215548_216538_+	copper resistance protein B	NA	NA	NA	NA
WP_082179799.1\|216769_218095_+\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_160232258.1\|218204_218450_+	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	NA	NA	NA
WP_000221358.1\|218439_218733_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_004641881.1\|218861_219191_-	four-helix bundle copper-binding protein	NA	NA	NA	NA
WP_005180661.1\|221245_221809_+	alkyl hydroperoxide reductase subunit C	NA	NA	NA	NA
WP_160242734.1\|222011_222887_+	pirin family protein	NA	NA	NA	NA
WP_034598019.1\|223320_224619_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_160242735.1\|224622_225447_+	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_005180651.1\|225808_226036_-	hypothetical protein	NA	NA	NA	NA
WP_104490119.1\|227019_228900_+	potassium transporter Kup	A7J6G4	Paramecium_bursaria_Chlorella_virus	1.9e-74	31.3
WP_160242736.1\|228989_229637_-	hypothetical protein	NA	NA	NA	NA
WP_005180613.1\|229901_230984_+	DNA/RNA non-specific endonuclease	H6X497	Enterobacteria_phage	1.6e-25	38.0
WP_160242737.1\|231054_231300_+	hypothetical protein	NA	NA	NA	NA
WP_104490858.1\|231520_231934_-\|transposase	IS200/IS605 family transposase	A0A1S5RHE3	Helicobacter_phage	2.3e-46	60.9
235208:235223	attR	NA	NA	NA	NA

DBSCAN-SWA_2

298460 : 343388

Salmonella_phage(25.0%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_160242755.1\|298460_299612_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_005180468.1\|299753_300218_-	bacterioferritin	NA	NA	NA	NA
WP_171065121.1\|300444_300627_-	(2Fe-2S)-binding protein	NA	NA	NA	NA
WP_104513240.1\|300793_301177_-	RidA family protein	NA	NA	NA	NA
WP_160242756.1\|301248_303348_-	HD domain-containing protein	J9Q7H7	Salmonella_phage	3.1e-09	36.5
WP_004809957.1\|303571_303853_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA
WP_045795273.1\|303929_304553_-	guanylate kinase	A0A240FAU9	Liberibacter_phage	4.7e-14	32.9
WP_104489996.1\|304688_305639_+	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	NA	NA	NA	NA
WP_160242757.1\|305802_306219_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA
WP_160242758.1\|306231_306735_+	type IV pilus modification protein PilV	NA	NA	NA	NA
WP_005180447.1\|306727_307801_+	PilW family protein	NA	NA	NA	NA
WP_160242759.1\|307797_308499_+	pilus assembly protein PilX	NA	NA	NA	NA
WP_160242760.1\|308525_312080_+	pilus assembly protein PilY	NA	NA	NA	NA
WP_005180440.1\|312081_312627_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA
WP_005180438.1\|312626_313061_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA
WP_004809941.1\|313205_313463_+	30S ribosomal protein S16	NA	NA	NA	NA
WP_075167879.1\|313491_314040_+	ribosome maturation factor RimM	NA	NA	NA	NA
WP_160242761.1\|314066_314816_+\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_003792460.1\|314989_315364_+	50S ribosomal protein L19	NA	NA	NA	NA
WP_104488271.1\|316290_317265_-	triacylglycerol lipase	NA	NA	NA	NA
WP_075174928.1\|317352_318339_-	triacylglycerol lipase	NA	NA	NA	NA
WP_160242762.1\|318750_319779_-	lipase secretion chaperone	NA	NA	NA	NA
WP_160242763.1\|319849_320917_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	Q9G0F2	Phage_Gifsy-1	4.0e-29	33.2
WP_160242764.1\|321120_322026_+\|tRNA	tRNA pseudouridine(55) synthase TruB	NA	NA	NA	NA
WP_160242765.1\|322039_322807_+	TSUP family transporter	NA	NA	NA	NA
WP_075168265.1\|322966_323425_+	hemerythrin domain-containing protein	NA	NA	NA	NA
WP_160243675.1\|323494_324367_-	EamA family transporter	NA	NA	NA	NA
WP_005180400.1\|324513_325389_-	EamA family transporter	NA	NA	NA	NA
WP_005180397.1\|325623_326856_-	phosphoglycerate dehydrogenase	A0A1V0SBV6	Catovirus	4.5e-101	47.1
WP_160242766.1\|326982_327189_+	hypothetical protein	NA	NA	NA	NA
WP_045795292.1\|327210_328620_+	FAD-binding oxidoreductase	NA	NA	NA	NA
WP_005180395.1\|328772_329144_+	hypothetical protein	NA	NA	NA	NA
WP_160242767.1\|329376_330606_+	MFS transporter	S4TR35	Salmonella_phage	2.4e-14	24.0
WP_045795347.1\|330718_331018_-	DUF3817 domain-containing protein	NA	NA	NA	NA
WP_075168261.1\|331304_331850_-	superoxide dismutase family protein	Q9MC02	Salmonella_phage	5.3e-38	54.5
WP_162182848.1\|331955_333083_-	AI-2E family transporter	NA	NA	NA	NA
WP_005180385.1\|333219_333864_-	ParA family protein	NA	NA	NA	NA
WP_005180383.1\|333983_334451_+	hypothetical protein	NA	NA	NA	NA
WP_104505690.1\|334515_335088_+	hypothetical protein	NA	NA	NA	NA
WP_160242768.1\|335094_336486_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A2I7RKG5	Vibrio_phage	5.4e-10	23.8
WP_016659780.1\|336558_337008_+\|transposase	IS200/IS605 family transposase	A0A1S5RHE3	Helicobacter_phage	2.7e-32	49.2
WP_160242769.1\|337037_337586_-	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_016658503.1\|337756_338320_+	hypothetical protein	NA	NA	NA	NA
WP_171503171.1\|338375_338537_+	hypothetical protein	NA	NA	NA	NA
WP_075167936.1\|338572_339187_+\|transposase	IS607 family transposase	A0A1S5RGS9	Helicobacter_phage	2.7e-62	63.2
WP_160242771.1\|339183_340341_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A7P9	Microcystis_virus	3.5e-55	36.9
WP_035363454.1\|340814_341147_-	HopJ type III effector protein	NA	NA	NA	NA
WP_104491954.1\|341320_341701_+	fluoride efflux transporter CrcB	A0A2H4PQR0	Staphylococcus_phage	8.9e-08	33.9
WP_016658508.1\|342089_343388_-	hypothetical protein	M4QMK7	Micromonas_pusilla_virus	5.3e-28	30.8

DBSCAN-SWA_3

1029382 : 1038236

uncultured_Caudovirales_phage(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_160242988.1\|1029382_1030516_+	toxic anion resistance protein	K4F9M7	Cronobacter_phage	1.1e-16	22.5
WP_075166954.1\|1030559_1031474_+	hypothetical protein	NA	NA	NA	NA
WP_005179083.1\|1031674_1033240_+	alkyl hydroperoxide reductase subunit F	A0A1W6JK46	Lactococcus_phage	1.5e-24	30.2
WP_127799989.1\|1033376_1033631_-	YfhL family 4Fe-4S dicluster ferredoxin	A0A1B1IWY9	uncultured_Mediterranean_phage	9.1e-17	46.6
WP_160242989.1\|1033634_1035026_-\|tRNA	tRNA 5-hydroxyuridine modification protein YegQ	Q6DW11	Phage_TP	4.7e-131	64.7
WP_160242990.1\|1035170_1035599_-	arsenate reductase (glutaredoxin)	A0A2H4J8T1	uncultured_Caudovirales_phage	1.5e-40	59.9
WP_005179068.1\|1035683_1036001_+	metalloregulator ArsR/SmtB family transcription factor	A0A2H4J145	uncultured_Caudovirales_phage	7.9e-26	64.4
WP_160242991.1\|1036005_1036479_+	arsenate reductase ArsC	A0A2H4J8A6	uncultured_Caudovirales_phage	6.6e-37	53.2
WP_075166950.1\|1036482_1037532_+	ACR3 family arsenite efflux transporter	NA	NA	NA	NA
WP_034598177.1\|1037531_1038236_+	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	4.1e-91	70.5

DBSCAN-SWA_4

1482118 : 1514060

Vibrio_phage(33.33%)

plate,transposase,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_160243186.1\|1482118_1484155_-\|holin	choline BCCT transporter BetT	A0A2I7QNT1	Vibrio_phage	9.3e-19	25.8
WP_034597681.1\|1484385_1484970_+	transcriptional regulator BetI	NA	NA	NA	NA
WP_171503185.1\|1484987_1486463_+	betaine-aldehyde dehydrogenase	NA	NA	NA	NA
WP_160243190.1\|1486479_1488147_+\|holin	choline dehydrogenase	A0A1V0SI18	Klosneuvirus	4.0e-52	30.2
WP_005177899.1\|1488305_1489079_+	hypothetical protein	NA	NA	NA	NA
WP_160243192.1\|1489109_1490501_-	sensor histidine kinase N-terminal domain-containing protein	W8CYF6	Bacillus_phage	5.2e-05	22.4
WP_016658141.1\|1490503_1491175_-	response regulator transcription factor	NA	NA	NA	NA
WP_160243194.1\|1491284_1493267_+	protein-disulfide reductase DsbD	NA	NA	NA	NA
WP_160243196.1\|1493263_1494106_+	redoxin domain-containing protein	NA	NA	NA	NA
WP_075175219.1\|1494118_1494859_+	thiol:disulfide interchange protein DsbG	NA	NA	NA	NA
WP_160243198.1\|1495859_1496867_-	OmpA family protein	NA	NA	NA	NA
WP_016658148.1\|1497526_1498513_+	DUF1852 domain-containing protein	NA	NA	NA	NA
WP_160243200.1\|1498541_1499570_+	methionine synthase	NA	NA	NA	NA
WP_005177877.1\|1499679_1500171_+	flavin reductase	NA	NA	NA	NA
WP_045795662.1\|1500212_1501013_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
WP_082179799.1\|1502345_1503671_+\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_160243202.1\|1503776_1504544_-	OmpA family protein	NA	NA	NA	NA
WP_075167762.1\|1504545_1505505_-	type VI secretion system-associated protein TagF	NA	NA	NA	NA
WP_127801016.1\|1505536_1509352_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_160243204.1\|1509392_1510811_-	hypothetical protein	NA	NA	NA	NA
WP_160243206.1\|1510807_1511803_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_160243208.1\|1511766_1513572_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_045795669.1\|1513583_1514060_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA

DBSCAN-SWA_5

1784255 : 1845344

Staphylococcus_phage(16.67%)

transposase,integrase,protease,tRNA

attL 1804145:1804160|attR 1841023:1841038

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_160243358.1\|1784255_1785620_+\|transposase	ISL3 family transposase	Q6V7R1	Burkholderia_virus	2.0e-62	35.2
WP_160243359.1\|1785870_1786179_-	hypothetical protein	NA	NA	NA	NA
WP_160243360.1\|1786267_1786558_-	hypothetical protein	NA	NA	NA	NA
WP_099475569.1\|1787433_1788366_-\|transposase	IS5-like element IS17 family transposase	Q1MVF0	Enterobacteria_phage	4.6e-58	40.9
WP_160243361.1\|1788754_1792258_-	hypothetical protein	NA	NA	NA	NA
WP_160243362.1\|1792269_1794576_-	hypothetical protein	NA	NA	NA	NA
WP_004638703.1\|1794580_1795033_-	hypothetical protein	NA	NA	NA	NA
WP_000174350.1\|1795084_1795324_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_160243363.1\|1795424_1796219_+	hypothetical protein	NA	NA	NA	NA
WP_160241409.1\|1796803_1798927_-	DUF3987 domain-containing protein	NA	NA	NA	NA
WP_160241410.1\|1798923_1799130_-	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_160241411.1\|1799473_1800382_-	hypothetical protein	NA	NA	NA	NA
WP_160241412.1\|1800462_1800975_-	hypothetical protein	NA	NA	NA	NA
WP_160241413.1\|1801057_1803937_-	HsdR family type I site-specific deoxyribonuclease	NA	NA	NA	NA
WP_160241414.1\|1803994_1804681_-	abortive infection protein	NA	NA	NA	NA
1804145:1804160	attL	NA	NA	NA	NA
WP_160241415.1\|1804689_1805793_-	restriction endonuclease subunit S	A0A2H4PQP5	Staphylococcus_phage	6.3e-22	27.9
WP_160241416.1\|1805792_1807361_-	type I restriction-modification system subunit M	A0A2H4PQP4	Staphylococcus_phage	6.8e-163	56.3
WP_160241417.1\|1807613_1808618_-	hypothetical protein	NA	NA	NA	NA
WP_071321205.1\|1810309_1811032_-	hypothetical protein	NA	NA	NA	NA
WP_160243699.1\|1812614_1813493_-	AAA family ATPase	C7BGE8	Burkholderia_phage	8.3e-17	26.2
WP_160241418.1\|1813570_1814773_-\|integrase	tyrosine-type recombinase/integrase	A0A2H4JAT5	uncultured_Caudovirales_phage	4.2e-51	32.3
WP_160243364.1\|1815798_1816365_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
WP_005177213.1\|1816474_1817224_+	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_005177212.1\|1817276_1817747_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
WP_160243365.1\|1819416_1820181_-	glutathione S-transferase N-terminal domain-containing protein	NA	NA	NA	NA
WP_160243366.1\|1820217_1820481_+	hypothetical protein	NA	NA	NA	NA
WP_005177206.1\|1820503_1821595_+	redox-regulated ATPase YchF	NA	NA	NA	NA
WP_160243367.1\|1821949_1822444_-	hypothetical protein	NA	NA	NA	NA
WP_045795021.1\|1822546_1823305_+	AzlC family ABC transporter permease	NA	NA	NA	NA
WP_104472645.1\|1823294_1823642_+	L-valine transporter subunit YgaH	NA	NA	NA	NA
WP_171293478.1\|1823823_1825038_+	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA
WP_160243368.1\|1825061_1827725_+	[protein-PII] uridylyltransferase	NA	NA	NA	NA
WP_160243369.1\|1827749_1828919_+	succinyldiaminopimelate transaminase	NA	NA	NA	NA
WP_104469920.1\|1829043_1829526_-	glutathione peroxidase	Q70H87	Fowlpox_virus	2.5e-23	38.0
WP_160243700.1\|1829522_1829942_-	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA
WP_005177173.1\|1830097_1831330_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
WP_160243370.1\|1831390_1833367_-	acyltransferase family protein	B5WZU0	Pseudomonas_phage	1.2e-55	35.0
WP_160243680.1\|1833870_1834374_-\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_000122230.1\|1834412_1834718_-\|transposase	transposase	A0A218MNC9	uncultured_virus	3.4e-18	52.5
WP_160243371.1\|1835134_1835407_-	hypothetical protein	NA	NA	NA	NA
WP_005177162.1\|1835859_1836063_+	hypothetical protein	NA	NA	NA	NA
WP_160241425.1\|1836815_1837652_-	protein kinase	A0A1V0SBL0	Catovirus	1.8e-05	33.7
WP_075166694.1\|1837617_1839132_-	DUF3336 domain-containing protein	NA	NA	NA	NA
WP_160243372.1\|1839312_1840185_+	DUF815 domain-containing protein	NA	NA	NA	NA
WP_104472654.1\|1840298_1841009_-	hypothetical protein	NA	NA	NA	NA
WP_005177148.1\|1841088_1842105_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	7.7e-123	66.1
1841023:1841038	attR	NA	NA	NA	NA
WP_001136722.1\|1842252_1842468_+	30S ribosomal protein S21	NA	NA	NA	NA
WP_005177146.1\|1842501_1842948_+	GatB/YqeY domain-containing protein	A0A292GL36	Xanthomonas_phage	3.8e-18	41.5
WP_034597653.1\|1843065_1843422_-	hypothetical protein	NA	NA	NA	NA
WP_160243373.1\|1843470_1843866_-	GFA family protein	NA	NA	NA	NA
WP_160243374.1\|1843904_1845344_-\|protease	M48 family metalloprotease	NA	NA	NA	NA

DBSCAN-SWA_6

2083710 : 2089634

Acinetobacter_phage(83.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_171065072.1\|2083710_2084286_+	gamma-glutamyl-gamma-aminobutyrate hydrolase family protein	A0A0P0IKJ1	Acinetobacter_phage	1.0e-103	93.7
WP_016659977.1\|2084305_2085352_+	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	5.2e-167	87.1
WP_005176475.1\|2085369_2086176_+	indole-3-glycerol phosphate synthase TrpC	A0A0P0IR83	Acinetobacter_phage	1.2e-126	85.1
WP_005176474.1\|2086382_2087066_+	Smr/MutS family protein	A0A0P0IDT4	Acinetobacter_phage	7.0e-88	75.5
WP_005176473.1\|2087159_2087708_+	GTP cyclohydrolase I FolE	A0A0P0HSD2	Acinetobacter_phage	3.4e-93	95.1
WP_005176472.1\|2087804_2088161_+	DUF861 domain-containing protein	NA	NA	NA	NA
WP_104473477.1\|2088272_2089634_-	diguanylate cyclase	A0A127AWB9	Bacillus_phage	3.4e-17	37.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP045132

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

4343 : 60213

Leptospira_phage(30.0%)

transposase,integrase

attL 22829:22847|attR 47763:47781

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_099143682.1\|4343_5051_-\|integrase	tyrosine-type recombinase/integrase	S5W9T9	Leptospira_phage	6.2e-31	35.8
WP_114190144.1\|5047_5263_-	hypothetical protein	NA	NA	NA	NA
WP_001120888.1\|5293_6787_-\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_000743213.1\|6997_7222_-	hypothetical protein	NA	NA	NA	NA
WP_001366550.1\|7218_7956_-	recombinase family protein	NA	NA	NA	NA
WP_160243712.1\|8104_9271_-	tetracycline-inactivating monooxygenase Tet(X)	NA	NA	NA	NA
WP_099143682.1\|9460_10168_-\|integrase	tyrosine-type recombinase/integrase	S5W9T9	Leptospira_phage	6.2e-31	35.8
WP_114190144.1\|10164_10380_-	hypothetical protein	NA	NA	NA	NA
WP_001120888.1\|10410_11904_-\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_000743213.1\|12114_12339_-	hypothetical protein	NA	NA	NA	NA
WP_001366550.1\|12335_13073_-	recombinase family protein	NA	NA	NA	NA
WP_160243712.1\|13221_14388_-	tetracycline-inactivating monooxygenase Tet(X)	NA	NA	NA	NA
WP_099143682.1\|14577_15285_-\|integrase	tyrosine-type recombinase/integrase	S5W9T9	Leptospira_phage	6.2e-31	35.8
WP_114190144.1\|15281_15497_-	hypothetical protein	NA	NA	NA	NA
WP_001120888.1\|15527_17021_-\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_000743213.1\|17231_17456_-	hypothetical protein	NA	NA	NA	NA
WP_001366550.1\|17452_18190_-	recombinase family protein	NA	NA	NA	NA
WP_160243712.1\|18338_19505_-	tetracycline-inactivating monooxygenase Tet(X)	NA	NA	NA	NA
WP_099143682.1\|19694_20402_-\|integrase	tyrosine-type recombinase/integrase	S5W9T9	Leptospira_phage	6.2e-31	35.8
WP_114190144.1\|20398_20614_-	hypothetical protein	NA	NA	NA	NA
WP_000898043.1\|20644_21568_-\|transposase	IS91-like element ISVsa3 family transposase	NA	NA	NA	NA
22829:22847	attL	NA	NA	NA	NA
WP_000122230.1\|23226_23532_+\|transposase	transposase	A0A218MNC9	uncultured_virus	3.4e-18	52.5
WP_160243680.1\|23570_24074_+\|transposase	IS630 family transposase	S5VXX4	Leptospira_phage	1.9e-05	25.9
WP_171503207.1\|23982_25026_-\|transposase	IS66 family transposase	A0A218MNE7	uncultured_virus	7.2e-60	48.3
WP_004730490.1\|25100_25436_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_151208067.1\|25432_25816_-\|transposase	transposase	NA	NA	NA	NA
WP_150378262.1\|26245_27157_-	ParB/RepB/Spo0J family partition protein	S5VSZ7	Leptospira_phage	2.0e-13	28.8
WP_150378261.1\|27164_27944_-	AAA family ATPase	A0A240F4U1	Ochrobactrum_phage	1.5e-14	30.4
WP_150378260.1\|28800_29973_+	RepB family plasmid replication initiator protein	NA	NA	NA	NA
WP_104425813.1\|30128_31347_+\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	1.4e-78	52.6
WP_035268402.1\|31475_31877_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_016165531.1\|31878_32169_-	type II toxin-antitoxin system HigB family toxin	F5A3A2	Riemerella_phage	9.4e-10	37.5
WP_127800924.1\|32639_33185_-	DNA-binding protein	NA	NA	NA	NA
WP_150378258.1\|33825_34338_-	signal peptidase II	NA	NA	NA	NA
WP_150378257.1\|34341_35238_-	cation transporter	NA	NA	NA	NA
WP_001219642.1\|35333_35741_+	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA
WP_000480968.1\|39469_40306_-	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	NA	NA
WP_001082319.1\|40305_41109_-	aminoglycoside O-phosphotransferase APH(3'')-Ib	NA	NA	NA	NA
WP_034619196.1\|41341_41626_+	hypothetical protein	NA	NA	NA	NA
WP_005028396.1\|41626_41857_-	hypothetical protein	NA	NA	NA	NA
WP_005267630.1\|41853_42333_-	replication initiation protein	A0A218MNI2	uncultured_virus	7.8e-09	34.4
WP_004658364.1\|43676_43898_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_004658363.1\|44092_44344_+	hypothetical protein	NA	NA	NA	NA
WP_001986288.1\|44596_44818_-	hypothetical protein	NA	NA	NA	NA
WP_000059658.1\|44851_46051_-\|integrase	tyrosine-type recombinase/integrase	E5AGD0	Erwinia_phage	3.4e-37	29.5
WP_001986287.1\|46444_47158_-	hypothetical protein	A0A0R6PHM5	Moraxella_phage	3.9e-41	41.7
WP_000904906.1\|49035_49650_-	recombinase family protein	E5FFF9	Burkholderia_phage	2.3e-37	48.6
47763:47781	attR	NA	NA	NA	NA
WP_160243713.1\|50885_51590_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	2.0e-138	99.6
WP_000052512.1\|52014_53490_+	ABC-F type ribosomal protection protein Msr(E)	A0A1B0RXA0	Streptococcus_phage	2.3e-160	59.0
WP_000155092.1\|53545_54430_+	Mph(E) family macrolide 2'-phosphotransferase	NA	NA	NA	NA
WP_082179799.1\|54682_56008_+\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_015060246.1\|56107_56719_-	recombinase family protein	NA	NA	NA	NA
WP_015060210.1\|56913_57294_+	hypothetical protein	NA	NA	NA	NA
WP_001067856.1\|57434_58139_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	6.9e-139	100.0
WP_000018326.1\|58268_59084_+	aminoglycoside O-phosphotransferase APH(3')-Ia	A0A193DTG4	Autographa_californica_nuclear_polyhedrosis_virus	4.3e-161	98.5
WP_000902128.1\|59237_59417_-	hypothetical protein	NA	NA	NA	NA
WP_001067856.1\|59508_60213_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	6.9e-139	100.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP045131

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP045132

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection