CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP045135	Acinetobacter indicus strain XG01 chromosome, complete genome	1 crisprs	TnsE_C,cas14j,csa3,RT,c2c9_V-U4,cas3,WYL,DEDDh	0	0	6	0
NZ_CP045136	Acinetobacter indicus strain XG01 plasmid pXG01-X3, complete sequence	0 crisprs	TnsE_C,WYL	0	0	1	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP045135_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045135_1

1041067-1041341

Unclear

Consensus_repeat	Method
CGTCGTGAAGGTGGCTTTGGCGACCGTCCACA	CRISPRCasFinder

3 spacers

cas3

The CRISPR arrays of NZ_CP045135_1

>merge|NZ_CP045135|1|1041067-1041341|CRISPRCasFinder
CGTCGTGAAGGTGGCTTTGGCGACCGTCCACAGCGTTCTTTCGATGACCGTCCACGTCGCGAATTCAACAGCGACCGTCCACGTCGTGAAGGTGGCTTTGGTGACCGTCCACAACGTTCTTTCGATGATCGTCCACGCCGTGAATTCAACAGTGACCGTCCGCGTCGCGAAGGTGGTTTCAACGAGCGTCCACGTTTTGATAGCAATGATGACAACCGTGGCAACCGCGTAGACTACAAACCACGTCGTGAAGGTGCTTTCGGTGACCGTCCTAA

>NZ_CP045135|1|1|1041067-1041341|CRISPRCasFinder
CGTCGTGAAGGTGGCTTTGGCGACCGTCCACA	GCGTTCTTTCGATGACCGTCCACGTCGCGAATTCAACAGCGACCGTCCA
CGTCGTGAAGGTGGCTTTGGTGACCGTCCACA	ACGTTCTTTCGATGATCGTCCACGCCGTGAATTCAACAGTGACCGTCCG
CGTCGCGAAGGTGGTTTCAACGAGCGTCCACG	TTTTGATAGCAATGATGACAACCGTGGCAACCGCGTAGACTACAAACCA
CGTCGTGAAGGTGCTTTCGGTGACCGTCCTAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045135.1\|WP_016658521.1\|1048014_1050060_-\|ATP-dependent-DNA-helicase-RecG	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|236794
NZ_CP045135.1\|WP_160232297.1\|1027760_1028915_+\|radical-SAM-family-heme-chaperone-HemW	unknown	unknown	gnl\|CDD\|235550
NZ_CP045135.1\|WP_016658517.1\|1043445_1044117_+\|outer-membrane-lipid-asymmetry-maintenance-protein-MlaD	unknown	unknown	gnl\|CDD\|275223
NZ_CP045135.1\|WP_075168246.1\|1031239_1032028_-\|shikimate-dehydrogenase	unknown	unknown	gnl\|CDD\|234703
NZ_CP045135.1\|WP_127801056.1\|1033837_1035211_+\|oxygen-independent-coproporphyrinogen-III-oxidase	unknown	unknown	gnl\|CDD\|236430
NZ_CP045135.1\|WP_168399737.1\|1046968_1047370_+\|NUDIX-domain-containing-protein	unknown	unknown	gnl\|CDD\|240046
NZ_CP045135.1\|WP_034597976.1\|1038386_1039217_+\|inositol-monophosphatase	unknown	unknown	gnl\|CDD\|238817
NZ_CP045135.1\|WP_104470047.1\|1032660_1033602_-\|oxygen-dependent-coproporphyrinogen-oxidase	unknown	unknown	gnl\|CDD\|235413
NZ_CP045135.1\|WP_160232298.1\|1044779_1045067_+\|STAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|132914
NZ_CP045135.1\|WP_005180329.1\|1041848_1042670_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213228
NZ_CP045135.1\|WP_171065120.1\|1044183_1044768_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|377516
NZ_CP045135.1\|WP_160232300.1\|1047392_1048028_-\|ComF-family-protein	unknown	unknown	gnl\|CDD\|223970
NZ_CP045135.1\|WP_005180334.1\|1036363_1038274_+\|1-deoxy-D-xylulose-5-phosphate-synthase	unknown	unknown	gnl\|CDD\|235470
NZ_CP045135.1\|WP_034598236.1\|1035450_1036053_-\|GTP-cyclohydrolase-II	unknown	unknown	gnl\|CDD\|234745
NZ_CP045135.1\|WP_016658513.1\|1032246_1032456_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045135.1\|WP_005180320.1\|1045206_1046220_-\|magnesium-and-cobalt-transporter-CorA	unknown	unknown	gnl\|CDD\|213369
NZ_CP045135.1\|WP_016658510.1\|1027174_1027633_-\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|377396
NZ_CP045135.1\|WP_005180348.1\|1029006_1030830_-\|acyl-CoA-dehydrogenase-C-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|185635
NZ_CP045135.1\|WP_005180328.1\|1042666_1043446_+\|lipid-asymmetry-maintenance-ABC-transporter-permease-subunit-MlaE	unknown	unknown	gnl\|CDD\|223838
NZ_CP045135.1\|WP_005180318.1\|1046372_1046966_+\|TIGR00730-family-Rossman-fold-protein	unknown	unknown	gnl\|CDD\|129813

Protein	Function_ID	Function_description	E-value
NZ_CP045135.1\|WP_016658521.1\|1048014_1050060_-\|ATP-dependent-DNA-helicase-RecG	gnl\|CDD\|236794	PRK10917, PRK10917, ATP-dependent DNA helicase RecG; Provisional.	0
NZ_CP045135.1\|WP_160232297.1\|1027760_1028915_+\|radical-SAM-family-heme-chaperone-HemW	gnl\|CDD\|235550	PRK05660, PRK05660, radical SAM family heme chaperone HemW.	0
NZ_CP045135.1\|WP_016658517.1\|1043445_1044117_+\|outer-membrane-lipid-asymmetry-maintenance-protein-MlaD	gnl\|CDD\|275223	TIGR04430, OM_asym_MlaD, outer membrane lipid asymmetry maintenance protein MlaD. Members of this protein family are the MlaD (maintenance of Lipid Asymmetry D) protein of an ABC transport system that seems to remove phospholipid from the outer leaflet of the Gram-negative bacterial outer membrane (OM), leaving only lipopolysaccharide in the outer leaflet. The Mla locus has long been associated with toluene tolerance, consistent with the proposed role in retrograde transport of phospholipid and therefore with maintaining the integrity of the OM as a protective barrier.	3.54577e-46
NZ_CP045135.1\|WP_075168246.1\|1031239_1032028_-\|shikimate-dehydrogenase	gnl\|CDD\|234703	PRK00258, aroE, shikimate 5-dehydrogenase; Reviewed.	1.24994e-109
NZ_CP045135.1\|WP_127801056.1\|1033837_1035211_+\|oxygen-independent-coproporphyrinogen-III-oxidase	gnl\|CDD\|236430	PRK09249, PRK09249, coproporphyrinogen dehydrogenase.	0
NZ_CP045135.1\|WP_168399737.1\|1046968_1047370_+\|NUDIX-domain-containing-protein	gnl\|CDD\|240046	cd04690, Nudix_Hydrolase_31, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required.	3.96303e-36
NZ_CP045135.1\|WP_034597976.1\|1038386_1039217_+\|inositol-monophosphatase	gnl\|CDD\|238817	cd01639, IMPase, IMPase, inositol monophosphatase and related domains. A family of Mg++ dependent phosphatases, inhibited by lithium, many of which may act on inositol monophosphate substrate. They dephosphorylate inositol phosphate to generate inositol, which may be recycled into inositol lipids; in eukaryotes IMPase plays a vital role in intracellular signaling. IMPase is one of the proposed targets of Li+ therapy in manic-depressive illness. This family contains some bacterial members of the inositol monophosphatase family classified as SuhB-like. E. coli SuhB has been suggested to participate in posstranscriptional control of gene expression, and its inositol monophosphatase activity doesn't appear to be sufficient for its cellular function. It has been proposed, that SuhB plays a role in the biosynthesis of phosphatidylinositol in mycobacteria.	7.94629e-111
NZ_CP045135.1\|WP_104470047.1\|1032660_1033602_-\|oxygen-dependent-coproporphyrinogen-oxidase	gnl\|CDD\|235413	PRK05330, PRK05330, oxygen-dependent coproporphyrinogen oxidase.	0
NZ_CP045135.1\|WP_160232298.1\|1044779_1045067_+\|STAS-domain-containing-protein	gnl\|CDD\|132914	cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation. Anti-anti-sigma factors play an important role in the regulation of several sigma factors and their corresponding anti-sigma factors. Upon dephosphorylation they bind the anti-sigma factor and induce the release of the sigma factor from the anti-sigma factor. In a feedback mechanism the anti-anti-sigma factor can be inactivated via phosphorylation by the anti-sigma factor. Well studied examples from Bacillus subtilis are SpoIIAA (regulating sigmaF and sigmaC which play an important role in sporulation) and RsbV (regulating sigmaB involved in the general stress response). The STAS domain is also found in the C- terminal region of sulphate transporters and stressosomes.	2.92172e-09
NZ_CP045135.1\|WP_005180329.1\|1041848_1042670_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213228	cd03261, ABC_Org_Solvent_Resistant, ATP-binding cassette transport system involved in resistant to organic solvents. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.	5.52648e-142
NZ_CP045135.1\|WP_171065120.1\|1044183_1044768_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|377516	pfam05494, MlaC, MlaC protein. MlaC is a component of the Mla pathway, an ABC transport system that functions to maintain the asymmetry of the outer membrane. This family of proteins is involved in toluene tolerance, which is mediated by increased cell membrane rigidity resulting from changes in fatty acid and phospholipid compositions, exclusion of toluene from the cell membrane, and removal of intracellular toluene by degradation. Many proteins are involved in these processes.	1.28169e-40
NZ_CP045135.1\|WP_160232300.1\|1047392_1048028_-\|ComF-family-protein	gnl\|CDD\|223970	COG1040, ComFC, Predicted amidophosphoribosyltransferases [General function prediction only].	2.0156e-30
NZ_CP045135.1\|WP_005180334.1\|1036363_1038274_+\|1-deoxy-D-xylulose-5-phosphate-synthase	gnl\|CDD\|235470	PRK05444, PRK05444, 1-deoxy-D-xylulose-5-phosphate synthase; Provisional.	0
NZ_CP045135.1\|WP_034598236.1\|1035450_1036053_-\|GTP-cyclohydrolase-II	gnl\|CDD\|234745	PRK00393, ribA, GTP cyclohydrolase II RibA.	2.65905e-124
NZ_CP045135.1\|WP_005180320.1\|1045206_1046220_-\|magnesium-and-cobalt-transporter-CorA	gnl\|CDD\|213369	cd12835, EcCorA-like_1, Escherichia coli Mg2+ transporter CorA_like subgroup. A bacterial subgroup of the Escherichia coli CorA-Salmonella typhimurium ZntB_like (EcCorA_ZntB-like) family of the MIT superfamily of essential membrane proteins involved in transporting divalent cations (uptake or efflux) across membranes. This subgroup includes the Mg2+ transporters Escherichia coli CorA and Salmonella typhimurium CorA (which can also transport Co2+, and Ni2+). Structures of the intracellular domain of Vibrio parahaemolyticus and Salmonella typhimurium ZntB form funnel-shaped homopentamers, the tip of the funnel is formed from two C-terminal transmembrane (TM) helices from each monomer, and the large opening of the funnel from the N-terminal cytoplasmic domains. The GMN signature motif of the MIT superfamily occurs just after TM1, mutation within this motif is known to abolish Mg2+ transport through Salmonella typhimurium CorA, and Mrs2p. Natural variants such as GVN and GIN, such as occur in some ZntB family proteins, may be associated with the transport of different divalent cations, such as zinc and cadmium. The functional diversity of MIT transporters may also be due to minor structural differences regulating gating, substrate selection, and transport.	4.76729e-128
NZ_CP045135.1\|WP_016658510.1\|1027174_1027633_-\|DMT-family-transporter	gnl\|CDD\|377396	pfam04657, DMT_YdcZ, Putative inner membrane exporter, YdcZ. DMT_YdcZ is a family of putative inner membrane exporters from both Gram-positive and Gram-negative bacteria.	2.39485e-35
NZ_CP045135.1\|WP_005180348.1\|1029006_1030830_-\|acyl-CoA-dehydrogenase-C-terminal-domain-containing-protein	gnl\|CDD\|185635	PTZ00456, PTZ00456, acyl-CoA dehydrogenase; Provisional.	0
NZ_CP045135.1\|WP_005180328.1\|1042666_1043446_+\|lipid-asymmetry-maintenance-ABC-transporter-permease-subunit-MlaE	gnl\|CDD\|223838	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism].	2.70936e-82
NZ_CP045135.1\|WP_005180318.1\|1046372_1046966_+\|TIGR00730-family-Rossman-fold-protein	gnl\|CDD\|129813	TIGR00730, LOG_family_protein_YJL055W, TIGR00730 family protein. This model represents one branch of a subfamily of proteins of unknown function. Both PSI-BLAST and weak hits by this model show a low level of similarity to and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting that the branches may have distinct functions. [Hypothetical proteins, Conserved].	3.79905e-61

>NZ_CP045135.1|WP_034597976.1|1038386_1039217_+|inositol-monophosphatase
MEPMVVMAARAAQTVGQELLKAHQNRHKLDLQVEEKGIDGPVTRVDRYLEQLTIDTLRKSYKNHSFLGEEFGLQEGKGHDADWCWVIDPLDGTLNFINGFPHFCISIAVQHKGVTQHGVIYDPVKDELFSASRGRGAMLNQRRIRVNVKDSLENTFLAVGHAYRAKRNGEVVSYAKNHFESLLNVTEAGAQYRRAGSAALDLAYVAAGRLDGYFELGLKPWDIAAGELIVKEAGGTVVDARGGSDSMDNGQVLACSMKMLKPLMKAVVPAWGDAAK
>NZ_CP045135.1|WP_005180334.1|1036363_1038274_+|1-deoxy-D-xylulose-5-phosphate-synthase
MLYTEIPTQRPVTPLLDSIDHPQQLRLLAQSQLAQVADELRQFILYAAGQSGGHFGANLGVIELTVALHYAFNTPHDRLIWDVGHQAYPHKALTGRREQLTTIRAKDGLAAFPAREESEFDTFGVGHSSTAISAGLGMALASRYQQQQREVVAIIGDGAMTAGMAFEAMNDAVAHQADLMVILNDNDMSISCSTGGFAKHLAALWQRGESVHIDAAGEAYIQPHPEWNYTSRLHCAATDAADNLFKAIGFDYFGPFDGHDVDQLVNVFQALKKRKGPRLIHVYTKKGKGFAPAEADQIKYHAISKINSSASAAAAPKYSDVFGQWLSDEAAQDSRLLAITPAMCEGSGMVQFAKQYPERFFDVAIAEQHAVTLAAGMACEGLKPVVAIYSTFLQRGYDQLIHDVALQNLDVTFGIDRAGLVGEDGPTHAGAYDYAYMRTVPNMVIMAPKDENECRQMLHTAYHYPGPAAVRYPRGNGVGVEIQQQLNLMEIGQAEIVARFNEQSDEQIAILAFGSRVYPAIEAAQAFAARHDIAVQVVNMRFVKPLDEAMIERLAENTQLFVTVEEHAVMGGAGSAVSEYLAKAQLVKPIIHLGLDDSFMQQATHSQMLQQAGLDAAGIEQAMTQAWNKLTESVSS
>NZ_CP045135.1|WP_034598236.1|1035450_1036053_-|GTP-cyclohydrolase-II
MPIEFVATSRLPTAFGEFKITVFQDPKTGEEHVALSKGLEQAPTEPVLVRVHSECLTGDAFASLKCDCGPQLQATQRLINEAGQGVILYLRQEGRGIGLTNKIRAYALQDQGHDTVDANLMLNLPADARQYDMCSIMLDHLQVKAVRLITNNPLKIEALREQGINVVDRVPLTVGLNPFNEQYLKTKHERMAHMYQKDDF
>NZ_CP045135.1|WP_127801056.1|1033837_1035211_+|oxygen-independent-coproporphyrinogen-III-oxidase
MLKPASSLVQKYNVPGPRYTSYPTVPYWEEASFSSEAWQQSLQRAFAESNASEGISLYIHLPFCESLCTFCGCHKRVTKRHEVEQPYIQAVLKEWDLYCQLLPDRPMIKEIHLGGGTPTFFSVAHLQQLIQGILAKAIVAPEHEFSFEGHPNNTTREHLQALYDLGFRRVSYGVQDYNEKVQKAIHRIQPYEHVQRVTEWARDIGYTSISHDLVFGLPFQNLEDVLHTIQQTTQLNPDRLAFYSYAHVPWIKGNGQRGFKDDDVPKDELKRTLYEEGKKKLLAHGYHEIGMDHFALKSDAMYQAFQQGSLHRNFMGYTASKTQLMIGLGLSSISDSWYSFAQNEKTLEDYYARLEQNEIPVFRGHVLTAEDLMIRRHILNLMCSFQTSWAEPEMQFPELPEVLKQLEEMQEDGLLTLFEDHLQVTEQGKPFVRNICMAFDLRLKRKVPSTRIFSMTI
>NZ_CP045135.1|WP_104470047.1|1032660_1033602_-|oxygen-dependent-coproporphyrinogen-oxidase
MQHPTSADIQRVREFLLDLQARICAALEQQERAGGGTAEFVIDDWQRPEGGGGRSRVLQNGSVIEKGGVMFSHINISKLPASATERHPGIAGAKAQAMGVSLVIHPKNPNVPTSHANVRLFVAEPEGQDPIWWFGGGFDLTPFYPNDEDVLSWHQTAHDLCAPFGEQVYAEHKQWCDDYFYLKHRDEQRGVGGLFFDDLNQWDFDTCFEYIQAVGNGYLEAILPIFKRNQDKPYTEAQREFQLYRRGRYVEYNLVYDRGTLFGLQTGGRIESILVSLPNLAGWSYRPEWDADSAEKKLTDYYLKPHDWLRELQ
>NZ_CP045135.1|WP_016658513.1|1032246_1032456_-|hypothetical-protein
MLQNFIAQHKGLLFWLILSLLVCSLSITFIFEHPLSDSLSIVASVFALIALVFTSVLLVLDTILDICNP
>NZ_CP045135.1|WP_075168246.1|1031239_1032028_-|shikimate-dehydrogenase
MRKQFAVVGNPIEQSRSPELHHAFAEKTGVDLVYRKRLAPLDGFEANIREFFAEGGVGMNVTVPFKEQAFALCDVLSERAKTAKAVNTLWMQDGQLHGDNTDGQGLVDAIRALNWNLDNTEILIIGAGGATRGVIYPLVQAGVKKVVIANRTLARAEQLVADLQQAVPQAELSAIGLDALAGEFDIVINATSASLSGDALILPDALQFQHAYEMAYGKPSSFLEQAKARQIPTSEGFGMLVGQAIESFSIWNGVKPDLKDFL
>NZ_CP045135.1|WP_005180348.1|1029006_1030830_-|acyl-CoA-dehydrogenase-C-terminal-domain-containing-protein
MPAYKAPLHDIRFLMNEVFDYPAHYQTLSNGEAADPETVDMILEGAADFCENVLSPLNQTGDQEGCHFENGEVKTPKGFKEAYDQFVQSGWQGLSYPEQYGGQNLPMSLNLIKSEMMGTANWSFQMYPGLSVGCINTIIQYGTDEQKDTYLPHLVAGTWSGTMCLTEPQCGTDLGQVKTKAEPQADGTYAISGTKIFISAGEHDLTENIVHIVLARLPDAPAGTKGISLFIVPKFLPSADGGVGERNPVTCGSIEHKMGIRASATAVLNFDNAVGYLIGEPNKGLHAMFTFMNTARIGTAIQGICHAEQAFQGALPYAKERMSMRALSGKKDPEKVADAIIHHADVRRMLLTQKAIAEGGRAMIYHAAQIADKMTDALERGDTAAFEQHDDHLGFYTPILKGFLTEMGYEAANHGMQVYGGHGYIKEWGMEQIVRDSRISTLYEGTTGVQALDLIGRKVLLTSKGKVIRDYTAEILKFCGQHARNKYMRRFAWDLTKLCAQWNALTVRIMLAARKDRDIVSSASVDFLMFSGYVMMAYFWAQQAAVASAKLASNDGAETPEFYKAKIKVADFYFERLLPRTQGHAEAMVNPSKTMTALAPEHFSFDY
>NZ_CP045135.1|WP_160232297.1|1027760_1028915_+|radical-SAM-family-heme-chaperone-HemW
MAELNPASVPLSLYIHMPWCVRKCPYCDFNSHAVPDGKLSLDLEQQYLQALVADFNTQLEFAQGREIHSVFIGGGTPSLISAVGYQWLFTQLKALLPFQDDCEITLEANPGTIEHDPFAGYLAAGINRLSIGVQSFNSDHLKKLGRIHSQSDALSAIHLAREAGFQRINVDLMHGLPEQTLEQALNDLKLAVEQGATHISWYQLTIEPNTVFFRTQPVLPVDEVLEAIQEQGEAYLKANGFINYEVSAWRKERPSAHNLNYWQFGDYLAIGAGAHGKVTRPDGVYRFQKTRLPKDYLAKVPAEHGQFKRITVEEMPFEFMMNALRLNAGVDAKLYAERTGLSLDDLAPVLTSLRQRKLLVEDASRLACTEQGHVFLNSVLEEFL
>NZ_CP045135.1|WP_016658510.1|1027174_1027633_-|DMT-family-transporter
MKISSQLLLLMPLAMGIGIAMTLQTAINTQLREYLYSPLQAALFSFLVGTIVLAILVFFQQVPKPNLHEIVHLPWYMWLGGVLGVYAISLSIYAAPKLGYLTLTGLILFGQIAMSMLVDHFGVLGTEKAPINWQRLLGGVVIFIGVLLTLQR
>NZ_CP045135.1|WP_005180329.1|1041848_1042670_+|ABC-transporter-ATP-binding-protein
MNNQTPLQAPALIEVNHLSFKRGERVIYDNVSLKIRRGQITAIMGPSGTGKTTLLRLIGGQLTPDQGEVLLDGKNIGKMSRQELFAARARMGMLFQSGALFTDMTVYENVAFPIRAHTRLPEHLIAELVALKLESVGLRGAEQLMPSELSGGMNRRVALARAIALDPELIMYDEPFAGQDPIVMGVLTRLIRSLREALDLTTIIVSHDVAETLSIADYIYVVAEGKVQGEGTPEQLKQHASPFVRQFLTGSVEGPVDYQFSHQPYLSHEVHSA
>NZ_CP045135.1|WP_005180328.1|1042666_1043446_+|lipid-asymmetry-maintenance-ABC-transporter-permease-subunit-MlaE
MNAIAALGRRVIERVRGIGVATLMLLQILFSMPTWIGVKLFIYQMYRVGVMSLLIIVVSGLFIGAVLGLQMYSILVTFGSEAMLGTAVALTLLRELAPVVAALLFAGRAGSALTAEIGLMKATEQLSSMEMIGVDPLKRVISPRLWAGIFSLPMLSVIFAAVGIMGGKFVGVDFLGADEGSYWSGMESTVQFYKDIFNGTIIKSFVFALICTWIAVYQGYACEPTSEGIATSTTRTVVYSSLCVLGFDFVLTAVMFGGV
>NZ_CP045135.1|WP_016658517.1|1043445_1044117_+|outer-membrane-lipid-asymmetry-maintenance-protein-MlaD
MKSRTSELAVGVFVILFGIALFFLAMRVSGLVGTTIQDSYSMTATFDNINGIKPRAKVALSGVKVGQVESITLDPVTRLATVTMILDGELTTFNQEQLQQVQQYALEELRYSSEYSEADSAQQKAMEKQLLDNMTSITNIDEDAYIMVATNGLLGEKYLKIVPGGGLNYLKRGDQISNTQSTMEIEDLVTKFVTGGAGNKSSSDNPADETSAETTDAEVSFVE
>NZ_CP045135.1|WP_171065120.1|1044183_1044768_+|ABC-transporter-substrate-binding-protein
MVAGSAFAAPTETPPAFIKKVADGLISRLKADHAKLQNNPALVKTIVRQNLDPYIDSQAFTRIVMGTYATNQYSSAAQRAQFEKNFRETLIENYGSAFAKFSNQTYTLRPYKASNSKNPVVTIDFNNKGEKIPVSFQLVDKGNQWKIRNINVSGIDLGLQFRNQFAANVKRNGGNIDKAIATFKPDAEAAVDKK
>NZ_CP045135.1|WP_160232298.1|1044779_1045067_+|STAS-domain-containing-protein
MIEYVNQELRVSGKIDFNNAEQYYQQGLQLIQQQPAPVVVNLAGLEQGSTLALAVLVRWLRQTPDTQGLVFKAVPEKMMKIIQSCHLQDDLQLSA
>NZ_CP045135.1|WP_005180320.1|1045206_1046220_-|magnesium-and-cobalt-transporter-CorA
MLEAFYATERGSLEDATINGGFDLHPELVWIDLIAPSQEEQQWVMDAYRQDLPTLKSLEDISSSARFYRDDDGVLHISTYFLTKNKNYQVDDESEENSSILATVQTVAFILNRDRLLTLRGEKLVAFRAFRARARRNDYEIDYKDPTWVLLGLLEAKLDELADILEDIHKDLEKYSTEVLNNRHREMILDLDDMITRLAQLEDMLGKAQLCLIDLRRVLTFLARPRALGSHIYDADIRELSEDVRSLVEHDAFLFQKVRFLLDTTSGFINTEQNDTIRRFSILPSMLAPPMLVASVYGMNTDVLPFAKGTTSFIIVSIILIGFFIGPLIYFRWKKWI
>NZ_CP045135.1|WP_005180318.1|1046372_1046966_+|TIGR00730-family-Rossman-fold-protein
MTNSIAVFCGSALGSDAVFVDTAQLVGQTIAKQGKTLVYGGGRSGLMGVVADSALQAGGAVIGVIPEPLVDRELAHPGLTELHVVKNMHERKTKMSELSDAFIAMPGGAGTLEEIFEQWTWAQLGIHLKPNAFLNVEGFYDDLLRFIRMTTDKGFTHARFTEALIVSDSMDEILSQFERFQAPEPKWGMADRQALVK
>NZ_CP045135.1|WP_168399737.1|1046968_1047370_+|NUDIX-domain-containing-protein
MNTITVAAAIILNEQQQLLLVRKQHTQCFMQVGGKLESAEPPEQTICREIAEEIGCQAQIKQFVGRFETATANEPDHRLVSYVYYVQLDQDPQVQAEIAEMKWIELEDKTTRLAPLTTEVVIPWVKQHLLQSA
>NZ_CP045135.1|WP_160232300.1|1047392_1048028_-|ComF-family-protein
MPMFKLLAHSRTLLQKLLPCQLCGSAAQQQYRVCADCLQQLPWLKANVYRQETEIQVACHYRYPVDRMIQQFKYEQQLHYQSLLAGSLCELTYPRVQAIVPMPVATERLAERGYHHTLLLAQVLARHLQLPIWQPVVRRHQHSQKGLSRLERLENLDQQFQLRPDAGRPYRRVLIVDDVVTTGSSIRALKQQLEQLGCHKVYAVCIASADG
>NZ_CP045135.1|WP_016658521.1|1048014_1050060_-|ATP-dependent-DNA-helicase-RecG
MAAVHQLQGVGAAAAALLEKLNIFTTDDLLFHLPRDYEDRSTIIPMNQLNVGRSYLLEGIVKGVDFPPGKRKSMAILLDDDSAKVTLRFYHIYKGLTDRAKVGNRLRVFGEVRVGARGLEMYHPEIQLISEHTPLPKTQLTAIYPSTEGLTQPKLRDYVKQALKQHSDDLPELLPEKFTNGYALKQALEYIHEPPTSANMLQLGQGSHPAQQRLIFEELVAHQVSLLTRRAYIQQIEAPAFAPSQRLAKQLLAGLPFSMTGAQKRVSKEIIQDLKQNKPMLRLVQGDVGAGKTLVAAVAACHALEEGWQVALMAPTEILAEQHYLNFKRWFEPLGLTVSWLSGKQKGKARASAEQIIQDGSAQLVVGTHALFQDNVEFAKLGLVIIDEQHRFGVDQRLALRNKGLNHMTPHQLVMTATPIPRTLAMSAYGDLDTSIIDELPPGRTPIQTVTIPLDRREQVLQRIASNCAEGKQAYWVCTLVEQSETLDAQAAEATFAEIKERFPELNIGLVHGKMKADDKQAVMQQFKDNQLQLLIATTVIEVGVDVPNASIMVIENAERLGLSQLHQLRGRVGRGAKASFCALLYKHPLSQNGQERLRILRESNDGFVIAEKDLELRGPGELLGTKQTGDMGFRVAKLERDDHLLNQAHYVAQQMLKDYPEQAEALLKRWLPEAPRYAYV

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

833426 : 952412

102

Escherichia_phage(18.18%)

tRNA,transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_160232595.1\|833426_834296_-\|transposase	IS982 family transposase	NA	NA	NA	NA
WP_160232238.1\|834476_837308_-	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	1.6e-311	56.2
WP_160232239.1\|837556_838234_-	thiaminase II	NA	NA	NA	NA
WP_005180731.1\|838501_839584_+	DUF475 domain-containing protein	A0A172Q0Y5	Acinetobacter_phage	1.1e-90	52.6
WP_104483896.1\|839736_841101_+	MFS transporter	NA	NA	NA	NA
WP_005180729.1\|841152_841719_+	single-stranded DNA-binding protein	M4SRQ0	Psychrobacter_phage	2.3e-36	65.0
WP_001067784.1\|842134_842839_-\|transposase	IS6-like element IS1006 family transposase	A0A077SL39	Escherichia_phage	1.9e-120	85.8
WP_005237495.1\|842902_844183_-	cation transporter	NA	NA	NA	NA
WP_000550240.1\|844272_844665_+	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA
WP_160232240.1\|844850_846155_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_001140620.1\|846363_846666_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_004668307.1\|846658_847015_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_005176780.1\|847537_848509_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_160232241.1\|848641_849526_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_004637127.1\|849610_850153_+	cysteine hydrolase	NA	NA	NA	NA
WP_000221358.1\|850227_850521_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_160232242.1\|850510_850756_-	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	NA	NA	NA
WP_000221358.1\|852330_852624_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_160232242.1\|852613_852859_-	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	NA	NA	NA
WP_004281879.1\|855873_856068_-	heavy-metal-associated domain-containing protein	NA	NA	NA	NA
WP_004668321.1\|856537_857419_-	CopD family protein	NA	NA	NA	NA
WP_004681441.1\|857483_857864_-	copper resistance protein CopC	NA	NA	NA	NA
WP_004281876.1\|858215_858458_+	DUF2789 domain-containing protein	NA	NA	NA	NA
WP_004695737.1\|858894_859326_+	hypothetical protein	NA	NA	NA	NA
WP_160232243.1\|859621_860272_+	isoprenylcysteine carboxylmethyltransferase family protein	NA	NA	NA	NA
WP_160232244.1\|860283_862659_+	heavy metal translocating P-type ATPase	A0A218MNH6	uncultured_virus	1.0e-93	36.3
WP_004663995.1\|862655_863939_+	MgtC/SapB family protein	NA	NA	NA	NA
WP_160232245.1\|863977_865378_-	heavy metal sensor histidine kinase	NA	NA	NA	NA
WP_005180717.1\|865370_866051_-	heavy metal response regulator transcription factor	NA	NA	NA	NA
WP_005006338.1\|866199_866496_+	hypothetical protein	NA	NA	NA	NA
WP_046206363.1\|866585_868349_+	copper resistance system multicopper oxidase	NA	NA	NA	NA
WP_160232246.1\|868335_869256_+	copper resistance protein B	NA	NA	NA	NA
WP_005180724.1\|869279_869501_+	hypothetical protein	NA	NA	NA	NA
WP_160232247.1\|870995_871364_+	cation transporter	NA	NA	NA	NA
WP_035269736.1\|871412_872738_+	TolC family protein	NA	NA	NA	NA
WP_016658777.1\|872739_873969_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_016658776.1\|873958_877099_+	CusA/CzcA family heavy metal efflux RND transporter	NA	NA	NA	NA
WP_160232248.1\|877185_878085_+	cation diffusion facilitator family transporter	NA	NA	NA	NA
WP_160232249.1\|878271_878838_+	recombinase family protein	M9Q1K0	Clostridium_phage	4.7e-29	41.4
WP_160232250.1\|879051_880377_-\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_035363642.1\|880544_880880_+	hypothetical protein	NA	NA	NA	NA
WP_016658770.1\|880929_881109_+	hypothetical protein	NA	NA	NA	NA
WP_004769969.1\|881105_881492_+	type II toxin-antitoxin system death-on-curing family toxin	NA	NA	NA	NA
WP_016658769.1\|881493_882045_-	macro domain-containing protein	A0A0K1L687	Scale_drop_disease_virus	2.6e-24	44.8
WP_001082319.1\|883281_884085_+	aminoglycoside O-phosphotransferase APH(3'')-Ib	Q75ZG1	Hepacivirus	4.9e-24	34.3
WP_000480968.1\|884084_884921_+	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	NA	NA
WP_160232251.1\|885087_885795_-\|transposase	IS6-like element IS1006 family transposase	A0A077SL39	Escherichia_phage	1.8e-118	85.0
WP_001445143.1\|886720_886972_+	hypothetical protein	NA	NA	NA	NA
WP_000251875.1\|886865_887168_-	phosphoglucosamine mutase	NA	NA	NA	NA
WP_001043260.1\|887254_888070_-	sulfonamide-resistant dihydropteroate synthase Sul2	NA	NA	NA	NA
WP_032028744.1\|889278_890487_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	2.1e-50	49.2
WP_160232252.1\|891115_892441_+\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_026438268.1\|892548_892794_+	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	NA	NA	NA
WP_005167203.1\|894031_895693_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	5.5e-171	55.1
WP_160232254.1\|896270_897635_-	SEL1-like repeat protein	NA	NA	NA	NA
WP_160232255.1\|898069_898672_-\|transposase	IS6 family transposase	A0A077SL39	Escherichia_phage	6.1e-104	86.9
WP_019838459.1\|898888_899863_+	calcium/sodium antiporter	NA	NA	NA	NA
WP_160232256.1\|899940_900645_+\|transposase	IS6-like element IS1006 family transposase	A0A077SL39	Escherichia_phage	1.9e-120	85.8
WP_019838469.1\|901091_901592_+	YqhA family protein	NA	NA	NA	NA
WP_160232257.1\|903806_905711_+	copper resistance system multicopper oxidase	NA	NA	NA	NA
WP_004897649.1\|905697_906036_+	hypothetical protein	NA	NA	NA	NA
WP_004668309.1\|906022_906967_+	copper resistance protein B	NA	NA	NA	NA
WP_160232258.1\|908637_908883_+	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	NA	NA	NA
WP_000221358.1\|908872_909166_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_004641881.1\|909294_909624_-	four-helix bundle copper-binding protein	NA	NA	NA	NA
WP_005180661.1\|911675_912239_+	alkyl hydroperoxide reductase subunit C	NA	NA	NA	NA
WP_160232259.1\|912440_913316_+	pirin family protein	NA	NA	NA	NA
WP_160232260.1\|913749_915048_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_160232261.1\|915051_915876_+	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_005180651.1\|916236_916464_-	hypothetical protein	NA	NA	NA	NA
WP_160232262.1\|917448_919329_+	KUP/HAK/KT family potassium transporter	A7J6G4	Paramecium_bursaria_Chlorella_virus	3.8e-75	31.4
WP_160232263.1\|919417_919897_-	hypothetical protein	NA	NA	NA	NA
WP_160232264.1\|920161_921244_+	DNA/RNA non-specific endonuclease	H6X497	Enterobacteria_phage	1.6e-25	38.0
WP_005180612.1\|921314_921560_+	hypothetical protein	NA	NA	NA	NA
WP_104490858.1\|921780_922194_-\|transposase	IS200/IS605 family transposase	A0A1S5RHE3	Helicobacter_phage	2.3e-46	60.9
WP_160232265.1\|922214_923273_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A0H3UZC2	Geobacillus_virus	4.8e-27	36.2
WP_005180609.1\|923305_924322_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_104472616.1\|924432_925065_+	hypothetical protein	NA	NA	NA	NA
WP_005180605.1\|925489_926248_-	imidazole glycerol phosphate synthase subunit HisF	NA	NA	NA	NA
WP_160232266.1\|926361_927312_+	homoserine kinase	NA	NA	NA	NA
WP_005180601.1\|927329_927956_+	DUF1294 domain-containing protein	NA	NA	NA	NA
WP_005180599.1\|927988_928381_+	hypothetical protein	NA	NA	NA	NA
WP_005180595.1\|928414_929350_-	DMT family transporter	NA	NA	NA	NA
WP_005180591.1\|929437_930169_-	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase	NA	NA	NA	NA
WP_160232267.1\|930347_931016_-	3'-5' exonuclease domain-containing protein 2	NA	NA	NA	NA
WP_016658424.1\|931090_931579_-	DUF805 domain-containing protein	NA	NA	NA	NA
WP_160232268.1\|931730_932348_-	imidazole glycerol phosphate synthase subunit HisH	NA	NA	NA	NA
WP_005180581.1\|932347_932941_-	imidazoleglycerol-phosphate dehydratase HisB	NA	NA	NA	NA
WP_016658426.1\|933037_933415_+	acetyl-CoA sensor PanZ family protein	NA	NA	NA	NA
WP_160232269.1\|933936_935241_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_005180572.1\|935531_936041_+	hypothetical protein	NA	NA	NA	NA
WP_005180567.1\|936123_937641_-	acetyl-CoA hydrolase/transferase family protein	NA	NA	NA	NA
WP_005180564.1\|937848_939309_-	HAMP domain-containing protein	W8CYF6	Bacillus_phage	1.7e-14	27.2
WP_005180561.1\|939569_940334_-	two-component system response regulator OmpR	W8CYM9	Bacillus_phage	2.2e-29	35.7
WP_160232270.1\|940669_943021_+	helix-hairpin-helix domain-containing protein	NA	NA	NA	NA
WP_005180556.1\|943073_943388_-	hypothetical protein	NA	NA	NA	NA
WP_005180554.1\|943469_944357_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_005180552.1\|944655_945933_-	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	A0A0B5JD48	Pandoravirus	1.3e-13	27.5
WP_005180550.1\|946249_947911_+	energy-dependent translational throttle protein EttA	A0A1B0RXA0	Streptococcus_phage	7.0e-41	27.5
WP_023274418.1\|948002_948452_-\|transposase	IS200/IS605 family transposase	A0A1S5RHE3	Helicobacter_phage	7.2e-33	50.0
WP_160232271.1\|950174_950516_-	hypothetical protein	NA	NA	NA	NA
WP_127799868.1\|950903_952412_-\|tRNA	glutamate--tRNA ligase	NA	NA	NA	NA

DBSCAN-SWA_2

1310367 : 1367815

Bacillus_phage(18.18%)

tRNA,coat,integrase,transposase

attL 1302307:1302322|attR 1360446:1360461

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1302307:1302322	attL	NA	NA	NA	NA
WP_075175161.1\|1310367_1311099_-\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_016659465.1\|1311179_1312136_-	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	3.0e-60	42.7
WP_075175162.1\|1312383_1315443_+	DNA translocase FtsK	S5VNE3	Mycobacterium_phage	5.9e-78	47.5
WP_016659463.1\|1315506_1315794_-	hypothetical protein	NA	NA	NA	NA
WP_005179812.1\|1315996_1316269_-	cell division topological specificity factor MinE	NA	NA	NA	NA
WP_005179808.1\|1316271_1317084_-	septum site-determining protein MinD	NA	NA	NA	NA
WP_005179806.1\|1317152_1317875_-	septum site-determining protein MinC	NA	NA	NA	NA
WP_168370694.1\|1317996_1319052_-	preprotein translocase subunit SecA	NA	NA	NA	NA
WP_005179793.1\|1319070_1319991_-	acyltransferase	NA	NA	NA	NA
WP_104473367.1\|1320233_1320884_+	OmpA family protein	NA	NA	NA	NA
WP_005179787.1\|1321010_1323050_+	UvrD-helicase domain-containing protein	A7KV33	Bacillus_phage	1.8e-110	37.6
WP_104473366.1\|1323080_1323533_+	dUTP diphosphatase	G0YQD9	Erwinia_phage	2.3e-47	64.2
WP_104500035.1\|1323716_1325141_+	phosphomannomutase/phosphoglucomutase	A0A127AWJ1	Bacillus_phage	1.9e-39	26.6
WP_016659457.1\|1325151_1326054_+	acetylglutamate kinase	NA	NA	NA	NA
WP_075168090.1\|1327066_1327915_+	class II glutamine amidotransferase	NA	NA	NA	NA
WP_005179777.1\|1328171_1328627_+	bacteriohemerythrin	NA	NA	NA	NA
WP_104473364.1\|1328793_1329876_+	hypothetical protein	NA	NA	NA	NA
WP_005179774.1\|1329875_1330199_+	RnfH family protein	NA	NA	NA	NA
WP_005179773.1\|1331649_1332048_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA
WP_005179771.1\|1332160_1332598_+	ferric iron uptake transcriptional regulator	NA	NA	NA	NA
WP_005179770.1\|1332671_1333790_-	PilT/PilU family type 4a pilus ATPase	NA	NA	NA	NA
WP_005179768.1\|1333817_1334855_-	type IV pilus twitching motility protein PilT	NA	NA	NA	NA
WP_104484613.1\|1334978_1335665_+	YggS family pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_104509865.1\|1335710_1336808_-	acyltransferase	NA	NA	NA	NA
WP_160232334.1\|1336811_1340417_-	AAA family ATPase	NA	NA	NA	NA
WP_160232335.1\|1340426_1341677_-	exonuclease SbcCD subunit D C-terminal domain-containing protein	NA	NA	NA	NA
WP_104473359.1\|1342084_1342546_+	hypothetical protein	NA	NA	NA	NA
WP_104511572.1\|1342600_1343725_-	glycine oxidase ThiO	NA	NA	NA	NA
WP_104484608.1\|1343741_1344755_-	porphobilinogen synthase	NA	NA	NA	NA
WP_034597877.1\|1344863_1345361_+	thioesterase family protein	NA	NA	NA	NA
WP_075175175.1\|1345481_1346966_-	glycerol kinase GlpK	NA	NA	NA	NA
WP_160232336.1\|1347556_1348726_-\|integrase	tyrosine-type recombinase/integrase	G3EN73	Psychrobacter_phage	8.8e-131	59.8
WP_160232603.1\|1349223_1349781_-	HAD-IA family hydrolase	NA	NA	NA	NA
WP_064096666.1\|1352268_1352550_+\|transposase	IS3 family transposase	U5P4I9	Shigella_phage	1.4e-21	68.4
WP_160232604.1\|1352546_1353047_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	2.2e-51	68.6
WP_160232338.1\|1353118_1354138_+\|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	4.7e-80	45.8
WP_160232339.1\|1354137_1354911_+	ATP-binding protein	A0A2L1IVB6	Escherichia_phage	2.4e-76	57.0
WP_160232340.1\|1354990_1355431_+	hypothetical protein	NA	NA	NA	NA
WP_160232341.1\|1355645_1356488_+	hypothetical protein	NA	NA	NA	NA
WP_075175389.1\|1357519_1359328_+	TonB-dependent receptor	A0A0P0I887	Acinetobacter_phage	2.9e-08	26.5
WP_160232342.1\|1359642_1360776_+	5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase	NA	NA	NA	NA
1360446:1360461	attR	NA	NA	NA	NA
WP_160232343.1\|1360935_1361229_+	hypothetical protein	NA	NA	NA	NA
WP_162924854.1\|1361380_1362724_+	methylenetetrahydrofolate reductase C-terminal domain-containing protein	NA	NA	NA	NA
WP_087528172.1\|1363200_1363677_+\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_104488383.1\|1363721_1364471_+	molecular chaperone	NA	NA	NA	NA
WP_104488384.1\|1364477_1366847_+	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_104488386.1\|1366837_1367815_+\|coat	spore coat U domain-containing protein	NA	NA	NA	NA

DBSCAN-SWA_3

1727182 : 1736033

uncultured_Caudovirales_phage(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_160232406.1\|1727182_1728316_+	toxic anion resistance protein	K4F9M7	Cronobacter_phage	7.4e-18	23.1
WP_104499015.1\|1728359_1729274_+	hypothetical protein	NA	NA	NA	NA
WP_160232407.1\|1729471_1731037_+	alkyl hydroperoxide reductase subunit F	A0A1W6JK46	Lactococcus_phage	1.5e-24	30.5
WP_005179080.1\|1731173_1731428_-	YfhL family 4Fe-4S dicluster ferredoxin	A0A1B1IWY9	uncultured_Mediterranean_phage	2.0e-16	46.6
WP_104473417.1\|1731431_1732823_-\|tRNA	tRNA 5-hydroxyuridine modification protein YegQ	Q6DW11	Phage_TP	2.8e-131	64.9
WP_075166952.1\|1732967_1733396_-	arsenate reductase (glutaredoxin)	A0A2H4J8T1	uncultured_Caudovirales_phage	1.2e-40	60.6
WP_005179068.1\|1733480_1733798_+	metalloregulator ArsR/SmtB family transcription factor	A0A2H4J145	uncultured_Caudovirales_phage	7.9e-26	64.4
WP_016659186.1\|1733802_1734276_+	arsenate reductase ArsC	A0A2H4J8A6	uncultured_Caudovirales_phage	3.0e-37	53.8
WP_005179062.1\|1734279_1735329_+	ACR3 family arsenite efflux transporter	NA	NA	NA	NA
WP_104470299.1\|1735328_1736033_+	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	8.2e-92	70.5

DBSCAN-SWA_4

1829087 : 1839655

Bacillus_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_104503755.1\|1829087_1831226_+	type I secretion system permease/ATPase	W8CYL7	Bacillus_phage	1.1e-25	23.5
WP_005178811.1\|1831222_1832407_+	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_075174380.1\|1832510_1833110_+	YigZ family protein	A0A1X9I5T8	Streptococcus_phage	6.5e-21	39.0
WP_171260902.1\|1833123_1833720_+	acyltransferase	M1HKK6	Paramecium_bursaria_Chlorella_virus	1.3e-08	49.2
WP_005178808.1\|1833856_1834699_+	universal stress protein	A0A2H4J154	uncultured_Caudovirales_phage	1.3e-35	33.9
WP_005178807.1\|1834841_1835507_-	O-methyltransferase	S5YRC3	Mycobacterium_phage	5.0e-30	38.7
WP_005178806.1\|1835639_1836362_-	hypothetical protein	NA	NA	NA	NA
WP_005178805.1\|1836492_1836816_-	ferredoxin family protein	NA	NA	NA	NA
WP_104470856.1\|1837021_1839655_-	DNA mismatch repair protein MutS	A0A1V0SC35	Catovirus	3.8e-33	23.6

DBSCAN-SWA_5

2718668 : 2724592

Acinetobacter_phage(83.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_171293323.1\|2718668_2719244_+	gamma-glutamyl-gamma-aminobutyrate hydrolase family protein	A0A0P0IKJ1	Acinetobacter_phage	2.9e-103	93.2
WP_016659977.1\|2719263_2720310_+	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	5.2e-167	87.1
WP_005176475.1\|2720327_2721134_+	indole-3-glycerol phosphate synthase TrpC	A0A0P0IR83	Acinetobacter_phage	1.2e-126	85.1
WP_160232543.1\|2721340_2722024_+	Smr/MutS family protein	A0A0P0IDT4	Acinetobacter_phage	7.0e-88	75.5
WP_005176473.1\|2722117_2722666_+	GTP cyclohydrolase I FolE	A0A0P0HSD2	Acinetobacter_phage	3.4e-93	95.1
WP_005176472.1\|2722762_2723119_+	DUF861 domain-containing protein	NA	NA	NA	NA
WP_160232544.1\|2723230_2724592_-	diguanylate cyclase	A0A127AWB9	Bacillus_phage	9.9e-17	32.8

DBSCAN-SWA_6

2732881 : 2796750

Enterobacteria_phage(16.67%)

tRNA,protease,integrase,transposase

attL 2726194:2726210|attR 2782417:2782433

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2726194:2726210	attL	NA	NA	NA	NA
WP_160232546.1\|2732881_2733814_+\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	6.1e-58	40.7
WP_127801961.1\|2734121_2734457_-	GreA/GreB family elongation factor	NA	NA	NA	NA
WP_160232548.1\|2734583_2735894_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_160232549.1\|2735890_2738659_+\|integrase	integrase	NA	NA	NA	NA
WP_160232550.1\|2738648_2739260_+	hypothetical protein	NA	NA	NA	NA
WP_160232551.1\|2739256_2739727_+	transcription elongation factor GreB	NA	NA	NA	NA
WP_160232552.1\|2739900_2740512_+	hypothetical protein	NA	NA	NA	NA
WP_160232553.1\|2740529_2741630_+	ImmA/IrrE family metallo-endopeptidase	A0A0A7RTT7	Clostridium_phage	5.0e-35	27.8
WP_160232554.1\|2742508_2745208_-	DEAD/DEAH box helicase family protein	NA	NA	NA	NA
WP_160232555.1\|2745217_2746921_-	site-specific DNA-methyltransferase	A0A220NUF4	Escherichia_phage	1.4e-68	35.5
WP_160232556.1\|2747091_2748345_-	hypothetical protein	NA	NA	NA	NA
WP_160232557.1\|2748426_2748603_-	hypothetical protein	NA	NA	NA	NA
WP_104470899.1\|2748969_2750085_+	transglycosylase SLT domain-containing protein	NA	NA	NA	NA
WP_016659963.1\|2750155_2750539_-	SCP2 sterol-binding domain-containing protein	NA	NA	NA	NA
WP_005176370.1\|2750755_2751679_-\|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	A0A0U2S5Z2	Escherichia_phage	2.3e-89	63.3
WP_104470898.1\|2752187_2753030_+	lytic transglycosylase domain-containing protein	A0A0H3V0Q1	Geobacillus_virus	1.5e-36	59.7
WP_005176364.1\|2753145_2754051_+\|protease	protease HtpX	NA	NA	NA	NA
WP_160232558.1\|2754167_2755472_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_005176362.1\|2755546_2756140_-	DUF4112 domain-containing protein	NA	NA	NA	NA
WP_005176359.1\|2756228_2757566_-	magnesium transporter	NA	NA	NA	NA
WP_160232559.1\|2757683_2760776_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA
WP_160232560.1\|2761060_2762959_+	hypothetical protein	NA	NA	NA	NA
WP_160232561.1\|2762997_2764149_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_104470894.1\|2764351_2765986_-	chaperonin GroEL	A0A219YK78	uncultured_virus	6.6e-177	61.2
WP_004810787.1\|2766043_2766334_-	co-chaperone GroES	A0A221S4G8	uncultured_virus	1.0e-16	51.1
WP_075174437.1\|2766534_2767293_-	metallophosphoesterase	NA	NA	NA	NA
WP_104489848.1\|2767273_2768212_-	diacylglycerol kinase	NA	NA	NA	NA
WP_104489849.1\|2768628_2770458_+	phosphoenolpyruvate carboxykinase (GTP)	NA	NA	NA	NA
WP_104484090.1\|2770633_2771068_+	hypothetical protein	NA	NA	NA	NA
WP_160232613.1\|2771096_2771765_-	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA
WP_045795204.1\|2771962_2772811_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	5.0e-27	35.2
WP_075167184.1\|2773229_2773961_+	hypothetical protein	NA	NA	NA	NA
WP_160232562.1\|2774001_2775771_-	alkaline phosphatase D family protein	NA	NA	NA	NA
WP_171066738.1\|2776419_2776710_-	hypothetical protein	NA	NA	NA	NA
WP_171260914.1\|2776861_2777704_-	dihydropteroate synthase	S4W084	Pandoravirus	5.5e-18	31.1
WP_104488952.1\|2777901_2778555_-	YitT family protein	NA	NA	NA	NA
WP_005176319.1\|2778814_2780704_-	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	M4QMW8	Micromonas_pusilla_virus	1.7e-107	47.0
WP_005176316.1\|2780838_2781489_-	23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE	NA	NA	NA	NA
WP_005176314.1\|2781685_2782009_+	ribosome assembly RNA-binding protein YhbY	NA	NA	NA	NA
WP_075167187.1\|2782018_2782558_+	DOMON-like domain-containing protein	NA	NA	NA	NA
2782417:2782433	attR	NA	NA	NA	NA
WP_075167188.1\|2782653_2783145_-	hypothetical protein	NA	NA	NA	NA
WP_104470928.1\|2783455_2784595_+	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	NA	NA	NA
WP_104489853.1\|2784609_2787840_+	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA
WP_075167191.1\|2787932_2788409_+	transcription elongation factor GreA	NA	NA	NA	NA
WP_104470926.1\|2788481_2789063_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_104470925.1\|2789195_2789591_+	RidA family protein	NA	NA	NA	NA
WP_075174428.1\|2789702_2790326_+	CatB-related O-acetyltransferase	M1HKK6	Paramecium_bursaria_Chlorella_virus	2.2e-16	34.9
WP_005176293.1\|2790646_2791084_+	universal stress protein	NA	NA	NA	NA
WP_171260910.1\|2791135_2791465_-	MGMT family protein	NA	NA	NA	NA
WP_104470924.1\|2791603_2792509_-	neutral zinc metallopeptidase	NA	NA	NA	NA
WP_075174426.1\|2792556_2793483_-	DUF808 domain-containing protein	NA	NA	NA	NA
WP_075167197.1\|2793686_2794700_+\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
WP_045796468.1\|2795106_2795754_+	YqiJ family protein	NA	NA	NA	NA
WP_160232564.1\|2795817_2796750_-\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	8.7e-57	40.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP045136

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2654 : 63568

uncultured_virus(29.41%)

integrase,transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005021615.1\|2654_4694_+\|protease	protease Lon-related BREX system protein BrxL	NA	NA	NA	NA
WP_100355917.1\|5332_5767_+	hypothetical protein	NA	NA	NA	NA
WP_001067784.1\|5786_6491_-\|transposase	IS6-like element IS1006 family transposase	A0A077SL39	Escherichia_phage	1.9e-120	85.8
WP_001447541.1\|7415_8300_+	DUF3363 domain-containing protein	NA	NA	NA	NA
WP_000214119.1\|8516_9731_+	chloramphenicol/florfenicol efflux MFS transporter FloR	S4TR35	Salmonella_phage	4.2e-19	28.7
WP_001255015.1\|9758_10064_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_001120888.1\|10175_11669_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_099143682.1\|11911_12619_+\|integrase	tyrosine-type recombinase/integrase	S5W9T9	Leptospira_phage	6.2e-31	35.8
WP_024160783.1\|12808_13975_+	tetracycline-inactivating monooxygenase Tet(X)	NA	NA	NA	NA
WP_001366550.1\|14123_14861_+	recombinase family protein	NA	NA	NA	NA
WP_000743213.1\|14857_15082_+	hypothetical protein	NA	NA	NA	NA
WP_001120888.1\|15292_16786_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_001445143.1\|16816_17068_+	hypothetical protein	NA	NA	NA	NA
WP_000251875.1\|16961_17264_-	phosphoglucosamine mutase	NA	NA	NA	NA
WP_001043260.1\|17350_18166_-	sulfonamide-resistant dihydropteroate synthase Sul2	A0A0B5J4J5	Pandoravirus	5.9e-09	27.6
WP_001067790.1\|18655_19360_-\|transposase	IS6-like element IS1008 family transposase	A0A077SL39	Escherichia_phage	5.1e-118	84.5
WP_014386410.1\|20822_21602_+	APH(3')-VI family aminoglycoside O-phosphotransferase	E4ZFP6	Streptococcus_phage	6.9e-31	34.7
WP_004994718.1\|21753_22779_+\|transposase	IS30-like element ISAba125 family transposase	W5R8L2	Staphylococcus_phage	1.2e-51	38.1
WP_004201164.1\|22879_23692_+	subclass B1 metallo-beta-lactamase NDM-1	NA	NA	NA	NA
WP_004201167.1\|23695_24061_+	bleomycin binding protein Ble-MBL	NA	NA	NA	NA
WP_004201168.1\|24065_24704_+	phosphoribosylanthranilate isomerase	NA	NA	NA	NA
WP_004201169.1\|24714_25746_-	twin-arginine translocation (TAT) pathway signal sequence domain protein	NA	NA	NA	NA
WP_004993315.1\|26218_26866_-	recombinase family protein	A0A0A8WIK3	Clostridium_phage	2.6e-15	31.4
WP_100355865.1\|27155_28319_-	hypothetical protein	NA	NA	NA	NA
WP_100355864.1\|28610_28928_+	hypothetical protein	NA	NA	NA	NA
WP_100355867.1\|29118_29352_+	hypothetical protein	NA	NA	NA	NA
WP_100355863.1\|29935_30622_+	hypothetical protein	NA	NA	NA	NA
WP_100355862.1\|30625_31183_+	hypothetical protein	NA	NA	NA	NA
WP_100355861.1\|31239_31674_+	hypothetical protein	NA	NA	NA	NA
WP_157797517.1\|34546_34897_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	4.4e-46	77.2
WP_100355859.1\|35802_37692_+	DEAD/DEAH box helicase family protein	NA	NA	NA	NA
WP_100355858.1\|38557_39172_+	AAA family ATPase	A0A222YXS3	Escherichia_phage	3.8e-32	37.0
WP_100355857.1\|39171_39609_+	hypothetical protein	NA	NA	NA	NA
WP_000934717.1\|40320_41586_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA
WP_000366814.1\|41585_41891_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_004726728.1\|42811_43069_-	hypothetical protein	NA	NA	NA	NA
WP_004658347.1\|43418_44015_-	putative adenosine monophosphate-protein transferase Fic	NA	NA	NA	NA
WP_002125865.1\|44027_44195_-	DUF2559 family protein	NA	NA	NA	NA
WP_000911011.1\|44469_44934_+	hypothetical protein	NA	NA	NA	NA
WP_002058482.1\|44946_47286_+	hypothetical protein	NA	NA	NA	NA
WP_002046149.1\|47290_50491_+\|integrase	site-specific integrase	NA	NA	NA	NA
WP_000550047.1\|50803_51022_-	hypothetical protein	NA	NA	NA	NA
WP_001190354.1\|51026_52322_-	Y-family DNA polymerase	A0A2H4JBL5	uncultured_Caudovirales_phage	2.0e-128	51.3
WP_000038641.1\|52336_52963_-	hypothetical protein	A0A2H4J538	uncultured_Caudovirales_phage	4.1e-26	41.6
WP_160232618.1\|53074_53566_-	SOS response-associated peptidase family protein	A0A218MNF5	uncultured_virus	1.4e-45	56.4
WP_159516858.1\|53638_55222_-\|transposase	IS66 family transposase	A0A218MNE7	uncultured_virus	2.5e-144	54.3
WP_000618087.1\|55296_55632_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_119026765.1\|55628_55838_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_159516858.1\|55954_57538_-\|transposase	IS66 family transposase	A0A218MNE7	uncultured_virus	2.5e-144	54.3
WP_000618087.1\|57612_57948_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_119026765.1\|57944_58154_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_159516858.1\|58270_59854_-\|transposase	IS66 family transposase	A0A218MNE7	uncultured_virus	2.5e-144	54.3
WP_000618087.1\|59928_60264_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_004646130.1\|60260_60644_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_000364662.1\|61086_61515_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_160232616.1\|61511_61847_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_160232617.1\|61921_63568_+\|transposase	IS66 family transposase	A0A218MNE7	uncultured_virus	2.1e-138	52.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP045135

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP045136

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection