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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP019432 Pseudomonas sp. S49 chromosome, complete genome 6 crisprs DEDDh,csa3,DinG,cas3,WYL 0 1 7 0

Results visualization

1. NZ_CP019432
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP019432_1 1778490-1778636 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP019432_2 2179134-2179270 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP019432_3 2688388-2688481 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP019432_4 3997714-3997858 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP019432_5 5785484-5785570 Orphan NA
1 spacers
DEDDh

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP019432_6 5804815-5804885 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP019432_6 6.1|5804838|25|NZ_CP019432|CRISPRCasFinder 5804838-5804862 25 MN927225 Escherichia phage vB_EcoS_XY1, complete genome 7320-7344 5 0.8

1. spacer 6.1|5804838|25|NZ_CP019432|CRISPRCasFinder matches to MN927225 (Escherichia phage vB_EcoS_XY1, complete genome) position: , mismatch: 5, identity: 0.8

ctgttgcggctgattctgcgatgga	CRISPR spacer
catcggcggctgattctgcgatggt	Protospacer
*  . ******************* 

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 838528 : 850869 18 uncultured_Caudovirales_phage(92.86%) NA NA
DBSCAN-SWA_2 1358214 : 1455406 105 Pseudomonas_phage(58.49%) protease,plate,holin,tRNA,tail,lysis NA
DBSCAN-SWA_3 2351370 : 2402511 73 Pseudomonas_phage(53.06%) terminase,protease,holin,tRNA,portal,tail,lysis,head,capsid,integrase attL 2370979:2370998|attR 2393367:2393386
DBSCAN-SWA_4 2669843 : 2676465 8 uncultured_Caudovirales_phage(66.67%) NA NA
DBSCAN-SWA_5 4215668 : 4221927 8 uncultured_Caudovirales_phage(83.33%) tRNA NA
DBSCAN-SWA_6 4286619 : 4348647 48 Hokovirus(18.18%) coat,tRNA,transposase NA
DBSCAN-SWA_7 6116135 : 6160456 41 Tupanvirus(25.0%) holin,protease,transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage