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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP034756 Enterobacter hormaechei subsp. hoffmannii strain Eh1 plasmid p2, complete sequence 0 crisprs NA 0 0 5 0
NZ_CP034754 Enterobacter hormaechei subsp. hoffmannii strain Eh1 chromosome, complete genome 1 crisprs DEDDh,csa3,WYL,DinG,cas3 0 1 9 0
NZ_CP034757 Enterobacter hormaechei subsp. hoffmannii strain Eh1 plasmid p3, complete sequence 0 crisprs NA 0 0 1 0
NZ_CP034758 Enterobacter hormaechei subsp. hoffmannii strain Eh1 plasmid p4, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP034755 Enterobacter hormaechei subsp. hoffmannii strain Eh1 plasmid p1, complete sequence 0 crisprs DEDDh 0 0 2 0

Results visualization

1. NZ_CP034756
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 7088 3 Leptospira_phage(50.0%) integrase,transposase attL 2621:2634|attR 15860:15873
DBSCAN-SWA_2 13893 : 14376 1 Moraxella_phage(100.0%) NA NA
DBSCAN-SWA_3 17435 : 18416 1 Escherichia_phage(100.0%) transposase NA
DBSCAN-SWA_4 25581 : 26127 1 Wolbachia_phage(100.0%) NA NA
DBSCAN-SWA_5 60161 : 106684 52 Enterobacteria_phage(10.0%) integrase,transposase attL 93048:93107|attR 104388:104643
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP034754
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP034754_1 3902079-3902155 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP034754_1 1.1|3902105|25|NZ_CP034754|CRISPRCasFinder 3902105-3902129 25 NZ_CP043437 Enterobacter sp. LU1 plasmid unnamed 351333-351357 5 0.8

1. spacer 1.1|3902105|25|NZ_CP034754|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 5, identity: 0.8

gaacattgtaggtcgggtaagcgtg	CRISPR spacer
gctttttgtaggtcgggtaagcgta	Protospacer
*  . *******************.

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 815069 : 910886 102 Burkholderia_virus(34.09%) integrase,protease,transposase,capsid,plate,tRNA,tail attL 899930:899947|attR 905660:905677
DBSCAN-SWA_2 953604 : 963238 10 Streptococcus_phage(33.33%) integrase attL 952641:952654|attR 963483:963496
DBSCAN-SWA_3 970107 : 976179 7 Shigella_phage(33.33%) NA NA
DBSCAN-SWA_4 2060807 : 2129694 102 Salmonella_phage(29.63%) integrase,holin,head,tail,terminase attL 2056855:2056870|attR 2116272:2116287
DBSCAN-SWA_5 2307643 : 2318408 13 Erwinia_phage(42.86%) head,terminase NA
DBSCAN-SWA_6 3150146 : 3192684 54 Enterobacterial_phage(34.78%) integrase,holin,protease,portal,tail,terminase attL 3141816:3141831|attR 3193106:3193121
DBSCAN-SWA_7 3293672 : 3376943 92 Enterobacterial_phage(30.91%) integrase,holin,protease,capsid,portal,head,tRNA,tail,terminase attL 3325930:3325944|attR 3365897:3365911
DBSCAN-SWA_8 4020068 : 4028188 11 uncultured_Caudovirales_phage(62.5%) NA NA
DBSCAN-SWA_9 4253260 : 4353712 87 uncultured_Caudovirales_phage(64.29%) integrase,protease,capsid,portal,head,tRNA,tail,terminase attL 4317027:4317047|attR 4333241:4333261
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. NZ_CP034757
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 11292 : 19358 8 Stx2-converting_phage(42.86%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
4. NZ_CP034755
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 63422 60 Salmonella_phage(58.33%) integrase,transposase attL 25134:25193|attR 51885:52007
DBSCAN-SWA_2 70282 : 159472 98 Salmonella_phage(96.74%) tail,terminase,transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage