CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
NZ_CP046725	Pantoea agglomerans strain ASB05 plasmid pASB05p3, complete sequence	0 crisprs	NA	0
NZ_CP046724	Pantoea agglomerans strain ASB05 plasmid pASB05p2, complete sequence	0 crisprs	NA	0
NZ_CP046723	Pantoea agglomerans strain ASB05 plasmid pASB05p1, complete sequence	0 crisprs	csa3	0
NZ_CP046722	Pantoea agglomerans strain ASB05 chromosome, complete genome	3 crisprs	DEDDh,cas3,DinG	5

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP046722_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046722_1

1628186-1628338

Orphan

Consensus_repeat	Method
GCAGCGGGCTGGCTATGAGCGGGTT	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP046722_1

>merge|NZ_CP046722|1|1628186-1628338|CRISPRCasFinder
GCAGCGGGCTGGCTATGAGCGGGTTTCGCCTGGCTGCGGGCTGGCACACTGAGTAAGTTTCGCTTAGCAGCGGGCTGGCTATGAGCAGGTTACGCCCGCCTGGGCGATGGAGCGTTTTAGATCACTTAGCCGCGCGTTAACACTGAGCGGGTT

>NZ_CP046722|1|1|1628186-1628338|CRISPRCasFinder
GCAGCGGGCTGGCTATGAGCGGGTT	TCGCCTGGCTGCGGGCTGGCACACTGAGTAAGTTTCGCTTA
GCAGCGGGCTGGCTATGAGCAGGTT	ACGCCCGCCTGGGCGATGGAGCGTTTTAGATCACTTA
GCCGCGCGTTAACACTGAGCGGGTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046722.1\|WP_158131602.1\|1631752_1633297_+\|chemotaxis-protein	unknown	unknown	gnl\|CDD\|185001
NZ_CP046722.1\|WP_010670882.1\|1616934_1617795_+\|phosphonate-ABC-transporter,-permease-protein-PhnE	unknown	unknown	gnl\|CDD\|273441
NZ_CP046722.1\|WP_158131597.1\|1618629_1621245_-\|response-regulator	unknown	unknown	gnl\|CDD\|237425
NZ_CP046722.1\|WP_010247747.1\|1626839_1628135_+\|NCS2-family-permease	unknown	unknown	gnl\|CDD\|225161
NZ_CP046722.1\|WP_022625464.1\|1635320_1636730_+\|EmmdR/YeeO-family-multidrug/toxin-efflux-MATE-transporter	unknown	unknown	gnl\|CDD\|182293
NZ_CP046722.1\|WP_158131601.1\|1629769_1629952_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046722.1\|WP_031591057.1\|1633400_1634855_-\|AMP-nucleosidase	unknown	unknown	gnl\|CDD\|236222
NZ_CP046722.1\|WP_061703821.1\|1625670_1626414_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP046722.1\|WP_158131600.1\|1629149_1629668_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046722.1\|WP_033778932.1\|1636926_1638039_+\|beta-propeller-fold-lactonase-family-protein	unknown	unknown	gnl\|CDD\|378416
NZ_CP046722.1\|WP_158131603.1\|1638753_1640421_+\|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein	unknown	unknown	gnl\|CDD\|225387
NZ_CP046722.1\|WP_061901337.1\|1617791_1618676_+\|phosphonate-ABC-transporter,-permease-protein-PhnE	unknown	unknown	gnl\|CDD\|273441
NZ_CP046722.1\|WP_010247773.1\|1615914_1616841_+\|phosphonate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|132472
NZ_CP046722.1\|WP_156323622.1\|1651802_1652030_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046722.1\|WP_158131599.1\|1624971_1625670_+\|D-lyxose/D-mannose-family-sugar-isomerase	unknown	unknown	gnl\|CDD\|377827
NZ_CP046722.1\|WP_129062970.1\|1630421_1630682_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237030
NZ_CP046722.1\|WP_158131604.1\|1640436_1651803_+\|filamentous-hemagglutinin-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|379124
NZ_CP046722.1\|WP_010247755.1\|1623988_1624927_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|380544
NZ_CP046722.1\|WP_010247757.1\|1622917_1623898_+\|ribose-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226633
NZ_CP046722.1\|WP_158131598.1\|1621392_1622907_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224053

Protein	Function_ID	Function_description	E-value
NZ_CP046722.1\|WP_158131602.1\|1631752_1633297_+\|chemotaxis-protein	gnl\|CDD\|185001	PRK15041, PRK15041, methyl-accepting chemotaxis protein.	6.52556e-79
NZ_CP046722.1\|WP_010670882.1\|1616934_1617795_+\|phosphonate-ABC-transporter,-permease-protein-PhnE	gnl\|CDD\|273441	TIGR01097, PhnE, phosphonate ABC transporter, permease protein PhnE. Phosphonates are a class of compound analogous to organic phosphates, but in which the C-O-P linkage is replaced by a direct, stable C-P bond. Some bacteria can utilize phosphonates as a source of phosphorus. This family consists of permease proteins of known or predicted phosphonate ABC transporters. Often this protein is found as a duplicated pair, occasionally as a fused pair. Certain "second" copies score in between the trusted and noise cutoff and should be considered true hits (by context). [Transport and binding proteins, Anions].	5.16204e-86
NZ_CP046722.1\|WP_158131597.1\|1618629_1621245_-\|response-regulator	gnl\|CDD\|237425	PRK13557, PRK13557, histidine kinase; Provisional.	2.97304e-91
NZ_CP046722.1\|WP_010247747.1\|1626839_1628135_+\|NCS2-family-permease	gnl\|CDD\|225161	COG2252, COG2252, Xanthine/uracil/vitamin C permease [Nucleotide transport and metabolism].	3.58687e-165
NZ_CP046722.1\|WP_022625464.1\|1635320_1636730_+\|EmmdR/YeeO-family-multidrug/toxin-efflux-MATE-transporter	gnl\|CDD\|182293	PRK10189, PRK10189, EmmdR/YeeO family multidrug/toxin efflux MATE transporter.	0
NZ_CP046722.1\|WP_031591057.1\|1633400_1634855_-\|AMP-nucleosidase	gnl\|CDD\|236222	PRK08292, PRK08292, AMP nucleosidase; Provisional.	0
NZ_CP046722.1\|WP_061703821.1\|1625670_1626414_-\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	2.69607e-72
NZ_CP046722.1\|WP_158131599.1\|1624971_1625670_+\|D-lyxose/D-mannose-family-sugar-isomerase	gnl\|CDD\|377827	pfam07385, Lyx_isomer, D-lyxose isomerase. Members of this family of sugar isomerases belong to the cupin superfamily. The enzyme from Cohnella laevoribosii has been shown to be specific for D-lyxose, L-ribose, and D-mannose. E. coli sugar isomerase (EcSI) has been structurally and functionally characterized and shows a preference for D-lyxose and D-mannose.	5.58083e-136
NZ_CP046722.1\|WP_033778932.1\|1636926_1638039_+\|beta-propeller-fold-lactonase-family-protein	gnl\|CDD\|378416	pfam10282, Lactonase, Lactonase, 7-bladed beta-propeller. This entry contains bacterial 6-phosphogluconolactonases (6PGL)YbhE-type (EC:3.1.1.31) which hydrolyze 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonising enzyme carboxy-cis,cis-muconate cyclase (EC:5.5.1.5) and muconate cycloisomerase (EC:5.5.1.1), which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold.	3.15609e-65
NZ_CP046722.1\|WP_158131603.1\|1638753_1640421_+\|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein	gnl\|CDD\|225387	COG2831, FhaC, Hemolysin activation/secretion protein [Intracellular trafficking and secretion].	1.7322e-118
NZ_CP046722.1\|WP_061901337.1\|1617791_1618676_+\|phosphonate-ABC-transporter,-permease-protein-PhnE	gnl\|CDD\|273441	TIGR01097, PhnE, phosphonate ABC transporter, permease protein PhnE. Phosphonates are a class of compound analogous to organic phosphates, but in which the C-O-P linkage is replaced by a direct, stable C-P bond. Some bacteria can utilize phosphonates as a source of phosphorus. This family consists of permease proteins of known or predicted phosphonate ABC transporters. Often this protein is found as a duplicated pair, occasionally as a fused pair. Certain "second" copies score in between the trusted and noise cutoff and should be considered true hits (by context). [Transport and binding proteins, Anions].	1.29732e-82
NZ_CP046722.1\|WP_010247773.1\|1615914_1616841_+\|phosphonate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|132472	TIGR03431, PhnD, phosphonate ABC transporter, periplasmic phosphonate binding protein. This model is a subset of the broader subfamily of phosphate/phosphonate binding protein ABC transporter components, TIGR01098. In this model all members of the seed have support from genomic context for association with pathways for the metabolims of phosphonates, particularly the C-P lyase system, GenProp0232. This model includes the characterized phnD gene from E. coli. Note that this model does not identify all phnD-subfamily genes with evident phosphonate context, but all sequences above the trusted context may be inferred to bind phosphonate compounds even in the absence of such context. Furthermore, there is ample evidence to suggest that many other members of the TIGR01098 subfamily have a different primary function.	2.70972e-103
NZ_CP046722.1\|WP_129062970.1\|1630421_1630682_+\|hypothetical-protein	gnl\|CDD\|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	6.44871e-09
NZ_CP046722.1\|WP_158131604.1\|1640436_1651803_+\|filamentous-hemagglutinin-N-terminal-domain-containing-protein	gnl\|CDD\|379124	pfam13332, Fil_haemagg_2, Haemagluttinin repeat.	5.50882e-37
NZ_CP046722.1\|WP_010247755.1\|1623988_1624927_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|380544	cd06321, PBP1_ABC_sugar_binding-like, periplasmic sugar-binding domain of uncharacterized ABC-type transport systems. This group includes the periplasmic sugar-binding domain of uncharacterized ABC-type transport systems that share homology with a family of pentose/hexose sugar-binding proteins of the type 1 periplasmic binding protein superfamily, which consist of two domains connected by a three-stranded hinge. The substrate specificity of this group is not known, but it is predicted to be involved in the transport of sugar-containing molecules and chemotaxis.	2.82871e-127
NZ_CP046722.1\|WP_010247757.1\|1622917_1623898_+\|ribose-ABC-transporter-permease	gnl\|CDD\|226633	COG4158, COG4158, Predicted ABC-type sugar transport system, permease component [General function prediction only].	8.44839e-160
NZ_CP046722.1\|WP_158131598.1\|1621392_1622907_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224053	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism].	0

>NZ_CP046722.1|WP_010247747.1|1626839_1628135_+|NCS2-family-permease
MLEKLFKLKAHNTTVRTEIIAGITTFLAMAYILFVNPSILGATGMDKGAVFVATCLAAAIGCVLMGLIANYPIALAPGMGLNAFFTYTVVLHMGYTWQIALGAVFLSAVIFFAMSLFKIREWIIASIPLPLRAGIGAGIGLFLALIALEGAGIVVDNPATLVGIGDLTKPGPLLAMLGFVVIVVLEARRVTGAVLIGILLVTFISMGIGLSPFAGVFSAPPSIAPTFMQLDIAGAFNVGLISVIFAFLFVDVFDNTGTLLGVTKRAGLADEQGNVPKMGRALIADSAAALFGSLLGTSTTTSYVESAAGVSAGGRTGLTAIVVAVLFLLALFFSPLASSVPVYATAPALLFVAVLMASGLAEIDWKDITTAAPVTVTALTMPLTYSIANGIAFGFITWTLVKLLSGRAKEVNAALVILSILFVIKLGWLSA
>NZ_CP046722.1|WP_061703821.1|1625670_1626414_-|response-regulator-transcription-factor
MKPAILVVDDDPAVCDVLQDALSEHLLTVYRCHQGREALSMLSEHPEISLVMLDMMLPDTNGLLVLQQLQRERPEVLVIMLTGMGSEAEMVVGLEMGADDYIAKPFNPRVVVARTRAALRRSGRIAQADPEQEGWRFGGWQLDDGRCQLFNPQRELVPLTQGEYSLLRALVRHARKVLTRDQLLELTHSESLDVFDRTIDVLIMRLRRKIETNPHQPDLIRTIRGLGYVFSADVVKPDSTTRASQIA
>NZ_CP046722.1|WP_158131599.1|1624971_1625670_+|D-lyxose/D-mannose-family-sugar-isomerase
MQRSEVNYYLQHTREFFRQQDVHLPPWADFDVSQWRAQEREVAQEILALRLGWDLTSFGAADFLQTGLTLFTLRNGSPGGQPWHKPYAEKIMHVREGQQTPMHYHPHKMEDIINRGGGNLIVELHNRDGDGLADSLVAVSLDGLRQTHAAGSLLRLSPGESVTLEAGIWHSFWGESGFGDVLVGEVSMTNDDENDNVFLTPLARFNPLEEDEAPRWLLCNDYAHWLSCARQA
>NZ_CP046722.1|WP_010247755.1|1623988_1624927_+|ABC-transporter-substrate-binding-protein
MRFNPIVTGLLAATLFSTGLAQAKELKSIGVTVGDLANPFFVQITKGAEMKARQLAGDKVNVTLVSSGYDLGQQVGQIDNFIAAKVDMIILNAADSKGIAPAVKRARDAGIVVVAVDVAADGANATITSDNTEAGAMACKYIADRLKNKGNVVIINGPPVSAVQNRVEGCMTELKTHPDIKLLSYNQNAKGSREGGLEVMTGLLSANPKIDAVFAINDPTAIGADLAAKQAQRSEFFIVGVDGSPDGEEALKRKNSLFVATPAQDPQVMAAKAVEIGYDILQGKPAPDKPVLIPVKLIDRNNIGSYQGWTVK
>NZ_CP046722.1|WP_010247757.1|1622917_1623898_+|ribose-ABC-transporter-permease
MTQLARTKAPTLKRALMGDLLQTVGILPILILIVAIFGFVTPNFFTEANLLNITRQASINIVLAAGMTFVILTGGIDLSVGSMLGTTAVVALVASLDPMLASMTIPMALGAGLVMGLFNGILVAWAGLPPFIVTLGTYTALRGAAYLLADGTTVINSDINFEWIGNGYLGPVPWLIVIAFAVIAICWFILRRTTLGVHIYAVGGNIQAARLTGIKVGMVLLFVYGMSGLLSGLGGLMSASRLYSANGNLGVGYELDAIAAVILGGTSFVGGIGTITGTLIGALIIATLNNGMTLMGVSYFWQLVIKGAVIIIAVLIDKYRTRHHVS
>NZ_CP046722.1|WP_158131598.1|1621392_1622907_+|ATP-binding-cassette-domain-containing-protein
MTATPILEMRGITRRLGSFYALKGVDLTVYPGEVHALMGENGAGKSTLMKILAGAYTASSGEILIEGKPWALKGPKEALAAGITLIYQEINLAPNLTVAENIFLGSEIAPGGLVKRRQMAEEAQRVIDRLGAQFSAWDLVSRLSIAEQQQVEIARALQRNSRILVMDEPTAALSNRETEQLFALIKRLRSEGMAIIYISHRMAEVYELSDRVSVLRDGEYVGSLTRDQLNASELVRMMVGRPLSDLFNKDRAIPLGDIRLAVNHLTDGGKVHPSSLEVRAGEIVGLAGLVGAGRSELAQLIFGVHKPKEGEIWIDGEKVTIHSPRDAIARGIGFLTENRKEQGLFLEMAAQENIVMATLERDASYGMLNRRKGQTIASEAIASLNIRVPHAQVRAGGLSGGNQQKLLISRWVAIGPRILILDEPTRGVDVGAKSEIYRMMQEMARQGVAILMISSELPEVVGMSDRVYVMHEGTIVGELEGSHISQENIMTLATGAHSAAAGEI
>NZ_CP046722.1|WP_158131597.1|1618629_1621245_-|response-regulator
MQRTYPWQAGARGRLLLFNLLVVSVTLMVSVVAIFGFRHAGAIQEQAQAQTLADMNGSLALARDTANVATAAVRLSQVVGALEYQSESQRLQQNQQALQQSLSLLASAPLAARQPERIARIRARSLMLEQTINSLLLTGHQRHLQRNNMLSDLWQTQILLSHIDQLVQREQRTLPDAALREQTERLITIAIRTPSPIAVIEQLQQVMAQWRNVPLTGVTGENVQRLLATQQRLLPLAEALEQSDLAIAYATYRIKALVAMLNEDISASVQQVALQSEARTLATHRELDSIIGFIALFALLALAITGYAGIYIYRNLGSSLTAIAGAMTRLAQGEQNVSVPGLQRRDELGELARAFNVFARNTASLAHTSRLLKEKSNQLESTFLAMRDGFALFDNNGQLVVWNAQYAELLGIAPHELHRGVPWQQLLAPLAVDLHDPGEPQEIRLADGRTLELRFSPIPRRGMVNTVLDRTSRKTLEEALQHSQKMKAVGQLTGGLAHDFNNLLAVIIGSLALTEGQLTPGPLASRIERARQAADRAAQLTQRLLAFSRKQALYPRAVSVVTLVDNLQGLLQHSLLPGQQLIIDAQRPGWPAWIDASQLENALMNLVVNARDAMHQQSGEIRLRIWNQRRLEGDEKRDRVTIEVIDHGCGMSAGVREQVFEPFFTTKATGSGSGLGLSMVYGFVRQSGGQIELETAPGQGTTVRLLLPRAPEAAVAAVITPPSPVHIETDIAAASNRLVLVLDDEPAVRQTLCEHLHQLGYLTLECGDGEEALALLRQTPDIDLLISDLMLPGEINGAEVIRQAQQNWPQLATLLISGQDLRHQPVTLPLCERLAKPWQQAQLVQALQRAWQRSKRLNRAQQAATTAPASH
>NZ_CP046722.1|WP_061901337.1|1617791_1618676_+|phosphonate-ABC-transporter,-permease-protein-PhnE
MISTVPDIALMKQQHRELFAAQPRYLRRLALITLAVLLYYLFFFSVFGLEWSRLLMGCQQLGRYFLRMFVWHDFVNWPFGYYLSQVGITLGIVFAGTLTASLLALPLSFLAARNVMHSRTAKPLAFLMRRLFDVLRGIDMAIWGLIFVRAVGMGPLAGVLAIILQDVGLLGKLYAEGHEAVERSPGRGLGAVGANSLQKHRFGIFTQSFPQFLALSLYQIESNTRSAAVLGFVGAGGVGLVYAENMRLWNWDVVMFLTLILVVVVMVMDVISSRLRKRYISGKPVPLWQPAARD
>NZ_CP046722.1|WP_010670882.1|1616934_1617795_+|phosphonate-ABC-transporter,-permease-protein-PhnE
MTEFEHYYQRIRRQQKRDTLLWSLLLVALYLAAGRVAEFNLLTVWQSLPHFFDYLHEILPVLHLPLLFADGKTEGSLAYWGYRLPIQLPLIWETLQLALASTLVAVALAAVLAFFAADNTQTPVSVRMTIRAFVAFLRTMPELAWAVMFVMAFGIGAIPGFLALALHTVGSLTKLFYEAIESASDKPVRGLAACGASKLQRMRFAFWPQVKPVFLSYSFMRLEINFRSSTILGLVGAGGIGQELMTNIKLDRYDQVSITLLLILIVVSLLDTLSGQLRRRVTGDRT
>NZ_CP046722.1|WP_010247773.1|1615914_1616841_+|phosphonate-ABC-transporter-substrate-binding-protein
MKLTSLALLTSVMAFGVSAADAPKQLNLGILGGQNATQQIGDNQCVKTFFDKELGVDTQMRNASDYSGVIQGLLGGKIDMVLSMSPASFASVYIQDPKAVDVVGIVVDDKDQSRGYHSVVIVKADSPYKKLEDLKGKSFGMADPDSTSGFLMPNQAFKKMFGGSVDDKYNNTFSSVTFSGGHEQDILGVLNNQFDGAVTWTSLVGDYNSGYTSGAFGRLIRMDHPDLMKQIRIIWQSPLIPNGPVLVSNKLPADFKAKVVSAIKKLDKEDHACFVKAVGGEQHIGQATVADYQNIIDMKRDLMKGSRG
>NZ_CP046722.1|WP_158131600.1|1629149_1629668_-|hypothetical-protein
MSFSLMPLQVLMADRVRTAVPGPMAVRVKMEDEGETGVSAEMEGQEETVVPEPMAVMAEMAAWEETVEMAGTEVLDRMARPEAMAGMEETAVWGEMAETVEMEGMAAMVVLVAQGGTEGMVAAREVTAVREVTVVTGEMAATKFNHALISLLSWQPAYKTGLNSNYHGLIHS
>NZ_CP046722.1|WP_158131601.1|1629769_1629952_-|hypothetical-protein
MAAMAAMAAIVGVPIIPIHQVKAVQAVRVAQAVRVAQAVRVVRAAQAVRVVTEGPVEKVF
>NZ_CP046722.1|WP_129062970.1|1630421_1630682_+|hypothetical-protein
MPFLLPLSLLELLPFWLALAAPLPSLPPAPPAPPTPPAPPCPPNAPPAPPAPPAPPAPPAPVRMKEDLEVLTSMFAALISNCLAIP
>NZ_CP046722.1|WP_158131602.1|1631752_1633297_+|chemotaxis-protein
MKISTRLGSGFGTLIIFFSICIVVAIHSLYQAKSTLESVVQGDMKKTKLINELTLAQRDMAITVRNLSLFSDQALIQEQSDRLVKLKAKFAASRDQLNTMISQSGDTEEYKAFAKISDSEKNALDAFSNTVPLALAKNSDITVKYLLEKVRPAQVPLLEGLTLMSEILAKQSDDSVNQNAKNTERAYIILVTLLVAAILFGTGTSIYLIRKLMSELGDEPSTARKLANAITNGDLTTPVSLKKNDTLSLMASLNSMQVRLRDIVSEIKSGSSSVALSANEISEGNNELASRTEQQAAALQETAASMEQLTATVQNNSKTARDTANSARDTASIAKRGETDVKRMSDTMSDISKSASKVRDITAVIESIAFQTNILALNAAVEAARAGETGRGFAVVASEVRTLAQRSATAAKDIKALIEQAVGQVECGVTVASDTGLSILKVVHLVDELAESMDAIALSSAEQMQGISQVSIAVSQMDGVTQNNSALVEESSSASQSLSEQAQSLRLIVETFKV
>NZ_CP046722.1|WP_031591057.1|1633400_1634855_-|AMP-nucleosidase
MPTLRKNLTSQQALDELERLYDGAVDALREAIKAFTENGTLPDAAARAQGLFVYPELRITWRGDGPQQNRTRAWGRFTHTGSYSTTITRPALLRHYISEQLQMLEKEYQLEIDVGPSSQEIPYPYVIDGSDLSLDRTMSAGIARHFPTTELSQIGDETADGLFHADAKSPLSHFDALRTDFSLARLRHYTGTSVEHFQPFVLFTNYTRYVDEFVRWAIEQVRDPSTPYDSLACAGDVVLTADTADSESMLSDLAWKKHQMPAWHLTSPNRRGITLINIGVGPSNAKTICDHLAVMRPHAWLMIGHCGGLRESQRIGDYVLAHAYLRDDHVLDSVLPPDIPVPSIAEVQRALYDATKSVSGMPGEEVKQRLRTGTVVTTDDRNWELRYSASALRFNLSRAVAVDMESATIAAQGYRFRVPYGTLLCVSDKPLHGEIKLPGQANRFYEGAISEHLQIGIHAVELLRAEGDKLHSRKLRTFNEPPFR
>NZ_CP046722.1|WP_022625464.1|1635320_1636730_+|EmmdR/YeeO-family-multidrug/toxin-efflux-MATE-transporter
MQAIKRTAWYPKRRSYRTLYWREISPLAVPIFFENACVLLMGVLSTFLVSWLGKEAMAGVGLADSFNMVIISFFAAIDLGTTVVVAFSLAKRNGKRARAATRQSLAMMTILAFVLVIAIEFWGHLIVDAIAGAADPKVKALALSYLQTSAWSYPAAAITLIGSGALRGAGNTKIPMLINGGMNILNIIISSVLIYGCFSWDGLGFIGAGLGLTITRYIGAIAVIYVLMIGFNASLKITLSSYFRRWNSSILMEVLGIGVPASIESVLFNGGKLLTQVFVAGMGTSEIAGNFIAFSIASLINLPGNALGSASTIITGTRLGRNQVFQAERQVRHVFWLATVCLTVMALLTVPLAGLLARFYTSDPEVINVTKQLIWLNALFMPLWAASWVLPAGLKGARDARYTMYVSMFSMWGARVVVGYLLGIELGMGVTGVWLGMFLDWTVRGIFFWWRLNSGKWLNRYRKMIAKTG
>NZ_CP046722.1|WP_033778932.1|1636926_1638039_+|beta-propeller-fold-lactonase-family-protein
MIRLKTALALLPLLCSAPLWATTFVYVSNAESGTVSRYQLSEANGSLQWRGDTPAGKKIMPLAASPDGKRLYGALRSPPYSIISWRVSGPHGDLQKLAVTPVAASFPWITTDKSGRYLLAASYDSDIVTSNRIDDKGVVTPQVTGEVKTGPHAHSVITDVSNHSLYVGNLGADRVLQYAFADNGAITPLGTGFVQGEKNSGARHSVISPDNRFLYNLAEMSGTITQFRRATDGSLTELKTWPNAVAKKYNLQHGEQRPAGYSDPTPRIWAADIKIIPDGQFIYVTERTSGTVSGYRVDKQSGELTLIGSWPVEKQPRSIAIDAQGKWLIVSGEKSAVIGSYAIDPASGELKRVAEAPAGKGANWVTLITQ
>NZ_CP046722.1|WP_158131603.1|1638753_1640421_+|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein
MKMPETGKWLVFGASLFISNVMAAPVTPGDLDVIQNQQQQRLQQDQQQRDALTQAHQVELQKTESAPASGPCFEINQISLQQASLITPDTQKRLVAPYINQCLSLDRINQLVRAISEWYVQRGYITSRAFLTEQNLSHGTLNITVLEGKLEAIHLQGASARQLNMAFPTRAGRILNLRDIEQGMEQINRLRTTPVQIEIIPSSQPGYSIVNLTSTPEFPLTLGLNMDNSGQRSTGIGQLSGSLVGNDLLGVADRWFVSGGRSSAFSDWRDAQNFQAGVSVPYGYGLLDYSYSWSNYHSRFNANSFDWYSNGDNISNRLSGSWVLFRNGQIKTGLQVGLNHYVSHNWLNETLLQSSSRKLTSLQIGFNHTQKIAGGVATLNPMLSRGMPWFDAESDKGKSDDFPKAEFRKWSVSSSYQRPVTQKMWWLSSFYAQWSPDRLYGSERLTIGGENSVRGYKEQYLSGDVGGYLRNELNYSLFTLPAIGEVSTTLALDGGWLQSDKQDRYAAGTLWGSSLGLGTRNAHVSTQLSLGIPVSYPNYLAPDRLSVYARVGLVF
>NZ_CP046722.1|WP_158131604.1|1640436_1651803_+|filamentous-hemagglutinin-N-terminal-domain-containing-protein
MDDQLKLSLPRRLLSYLICSLIAFQPLLPAFSAAIAPVTPGTNVDAAGNGVPVINIATPNAAGLSHNQYQNYNVGQEGLILNNATGRLTQTQLGGLVQNNPNLKAGQEARAIINEVVGANRSQLQGYTEVAGKAANVMVANPYGITCNGCGFINTPNVTLTTGKPQLDAQGNLQSLEVTKGAISIEGKGLDGSQADAVSIIARATEINAGIHAKDLNVTLGANRVGADGSVTPIAGEGAAPSVAVDTGALGGMYANRIHLVSSENGVGVNLGNLNARQGDMVLDAQGRLSINNSLTSGTLTAKGSSIALQGEHKAGGNVALTAQQDIALNGASLGSDASLDLNSQGNITLKGSSVKAGQNVRLSGANLSVDNSSSGSAVDALQLSATSQLDNAGQLAAAKTLDIQAAQIANSGSLASNGDVQVRTNTLQQNGKLLAQGKNTLAVSGQLTNRDEISGSSLNIQSGTLDNSGKLISMGDATITANRLNQDGIFSAQGNALFSVADTFSNSGNLVSQRLQIDVPTLNNSGEMVSHGDAVINSDTLQQNGSITARGDAQLTARGRLENQGAISSQNALILNSAQLRNMGSLTAPNLTLTAGQISNGGLLQGSNQLSLNSGQLDNLAAGTISSDNDFALDLPQLNNSGLITSGKTLVVSGDQLNNSGEINAASLSARYGHLDNQLGGKLLASDPLQLHGDVLTNQGIIAAAALNSDVSQINNSGTIQGDKAVSLQGSGLINSGTLLSAGQLNVQQQMLDNSGLMQGKQLTLNADRWQNSGNALSEADADLQSDTLVNSGKILGQQGIALKANHTDNSGWLIAQALMLRGDMINSGLIQGNQQITLEGDQLDNQQGGQLLSDGTLNGNITSLNNHGAMQADQMALNAKALQNSGTVRAGKTLTAHVGGVLDNSGSLISQQQMNLQAGEIDNKGTLAADNLSLHAPVLSNAGLLQGNSTLTLDHQQLHNLQGGQLIAGGPLTLTLDQLDNDGLLQVNGKLSVNGNRLNNSGRLLSDDLDLQIADTLNNSSTGQIVTGQQADLHAQTLSNSGQIAAQQLSASGNTLENSGLLQGDTQLDLGFAQTLNHNNGQLLSGDRLIVKGGSAINDGSWQGQQLDVTLDSLDNRGSLNGISALRGNIATDLINSGMLVSQGNSDLNATTLRNSGKIMADRLGLQGSSLNNNGLLQGNTALTAQADNVTQSAGGKTLSGGTLTLTAGQLNTQGTLQGEQATVNADNWLHQGSLLGSKDLNASISNELHNTGSLMSQNTAQVTANTLNNSGSLLSEGAMVLNGAALNNSGSVQGKTLTISPASVINQGSLIGLQALTFAAAPQVAGRMLLRALAAPSRQLINNQGGSLLTQGTLNINGGDVVNNGSWQGQQILLNARQLTNNGAIQSADALQLILADRLDAGAGSKISANGTAALQALTLTNQGEWIARNLTLRGDTLNNNGTVTGVDALTVGLNGALTQQQDKTLLSAGRLTLQSSSLNNAGRVQGGDLQITSGAVDNNGRLQGDNSLLVNAGGRITNGGNGAMITQNALTLTGPELFNYGLIQGNGNGVATLTGLTQNDGRWLSGGAQTLNTPQLNNNGWLQASQLILNATNASNNGTLLADGQGTLTGNGFSNQGTAQGGNLEVNYQQVNNSGTLLGNNRLSVMAAQVNQQSSGRLFSGGTLLVHSNGFDQTGQVVALGDATLEIANGFTGRDVLAAGGRLSVSSNGAIDNQGTMQGGALTLSAGGDLTNNGQLTTGSGDSTFSGNRIAMNGNGSLQGGGNINLASRSDITVDGFTGTLGNLTLSAPGSIVNNALLYAAGNLSLFANSIRNQRADMLAGGSVWLQGDAAGNANGEVVNNSGTIETQNGDITINTGHLLNTRDGLRTSQMNVTSPSRAGVGDATIKINVNELPAGSYGYYTITQTKESGGGCAGADGGCSVHTTTKNYYAPFQSAVIQKFALSSSTIDVSSNGAAGTVSSGRDLLIRANNLDNQASNLLANRNISLGGGNLNNQSWQAGVQNNYAVYEYKGNKPTSGQPGSNTGPFKGTGHIDTESNFIFYNLTGNETTFTLGQLYRAVIQAGGNVSANFSGDISNTNTTANAGWSGNTLSAPALRVLTAAGTAGAQSHQQLATADKAAINTPQWRDQLQNALQQVNGAGALETASQGSASLTQYATAGKNNAALGKAVNLTNASQGPASLHNYKAAEVDISAYPLPSGENGYFVASNTNSRYLITVNPKLNGLGQLDQSLFGELNAKLGKQPATTPLQETRPQYTDENAFLGSSYMLDRLNLKPDYDYRFLGDAAFDTRYVSNAVLNQTGNRYINGLGSDLAQMRYLMDNAAAAQKSLGLEFGVSLSAGQLASLDKSMVWWEATTINGETVMVPKLYLSTKDVEMRDGSVIAGNNVTLKGGNITNTGSSVMAKNDLTIDSQNTLSNLNAGLLHAGGDLQLSALNDINNVSATISGKKVALESINGDINNLTTSQLWHLDADNGKGAKKSYTETLSGPTASITSLDSLSLKAGNDIAVTGANLKAGGDLLLNAWNDIAITGNQNVTGSAQSGFGNRWQKVDPTSTTTVTTVGSQIAAGGNMAMQAGHDLTVTASNISAGKNAALAAGNDLNLNSATTSQNDVKGKRETHSTGLDRTTLTSGGDFALQAGRDLNSQAAGIAADKDVTLQAGRDVNLLAAETGSGNSYKSGKKVEINESVRQQGTEIASGGSTTVKAGQDVNSEAAQVTASGNIAVGAGRDINLTTATESDYAYKEETKTKKGFLSKKTTHTISEDSDTRENGTLLSGDNVTLNAGNNLLVQGSQVVGDGTVALRAGNNVDIVAATNTDSTWRFSETKKSGLMGTGGIGITVGSSKSVHDLRDKGTTQSQSASTVGSTGGNVSIIAGGQAHVSGSDLVAGRDLAITGDSVIIDPGHDKRTHDELFEQKKSGLTLALSGVVGEAINNAVAAAQTSKKESDGRLAALQATKAALSGVQAVLGGQLAEASADPNNGLGVSLSLTTQKSKSQQHQASDSVAGSTLNAGKNLSITSAGKGSGEHSGDILIAGSQLKAAGDSSLNAARDIVLSGAANTQESSGKNSSGGGGVGISFGAGQGSAGISIFASVNGAKGKESGNGTRWSETTLDSGGRVSLNSGRDTTLNGAQVSGNQVTADVGRDLTITSQQDSDRYDSKQTSYGAGGSFTFGSMSVSGYASVNQDKMHRNFDSVQEQSGIYAGNGGFDITVGNHTQLNGAVIASQGDAADNRLDTGTLGFTDIGNAADYRVSHSGGSIALSSGGGMGAQMLSSVASNAASTLLSGLNNNGHAEGTTQSAVANGTVIIRDRVNQKQDVADLSRDTEHANDSISAIFDKEKEQKRLQTAQLAGEISGQMTNIVTTMGDIKGLEKAQSAKNAETLPAGATEKQRGEWLEKMRDSPEYQAEMKQWGIGSTSQKVAQTVGSILTGLVTGNAGQAVAGGLNPWAAQLIKKETTDASGNVDVATNAMAHAVWGAVSSQMSGGSAAAGAAGAFSGELATRYIAEKYWGADTPEKIAALGQEDREQLSLLGTLAAGLAGGMLGNSSAAATSGAVAGKNAVENNELSGLSGFGSGFWSNNQAQGSLKNNTNLTDETGKVLNPATPEEIKYASDKLVSGDLPAGQNPATGLLTAWGAGATAVVAPVLLPSGATAGSIIGAGAIGGSANILNQLQSGDPFSATDALIATGISGLTQGKGFWFTEVAGITGAYAGAKLQGKEALPIVAGAAFGTGVGAAGGKAVEVGNKYLPLISEKAAGLAGAVIGSGASEVAGSELQKQLENK
>NZ_CP046722.1|WP_156323622.1|1651802_1652030_+|hypothetical-protein
MKNIALAIKLIFYFFLITTLTLFLVRLGVASVFMIRNGSFSFEWRENLFDSIQRGAVIGLVLGIGILFLSSLKRR

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Crispr_ID: NZ_CP046722_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046722_2

1805807-1805908

Orphan

Consensus_repeat	Method
GGGCAGCCAGGCTGCCCGTTTGAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP046722_2

>merge|NZ_CP046722|2|1805807-1805908|CRISPRCasFinder
GGGCAGCCAGGCTGCCCGTTTGAGGGAGTGAATAAGGCGTATGATCCCTGAGCCGGTGCTGACTTTAAACGCCTAAAAGGGCAGCCAGGCTGCCCGTTTGAG

>NZ_CP046722|2|2|1805807-1805908|CRISPRCasFinder
GGGCAGCCAGGCTGCCCGTTTGAG	GGAGTGAATAAGGCGTATGATCCCTGAGCCGGTGCTGACTTTAAACGCCTAAAA
GGGCAGCCAGGCTGCCCGTTTGAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046722.1\|WP_158131634.1\|1801707_1803057_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|341030
NZ_CP046722.1\|WP_158131637.1\|1811294_1813334_+\|carboxy-terminal-processing-peptidase	unknown	unknown	gnl\|CDD\|236873
NZ_CP046722.1\|WP_010258776.1\|1810573_1811275_+\|RNA-chaperone-ProQ	unknown	unknown	gnl\|CDD\|235322
NZ_CP046722.1\|WP_158131638.1\|1816280_1817072_+\|DNA-binding-transcriptional-regulator-KdgR	unknown	unknown	gnl\|CDD\|185046
NZ_CP046722.1\|WP_061901379.1\|1814722_1816093_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|129794
NZ_CP046722.1\|WP_010258788.1\|1817102_1817339_-\|membrane-protein	unknown	unknown	gnl\|CDD\|372870
NZ_CP046722.1\|WP_003852678.1\|1813578_1814460_+\|protease-HtpX	unknown	unknown	gnl\|CDD\|235478
NZ_CP046722.1\|WP_010258743.1\|1795493_1797176_-\|choline-dehydrogenase	unknown	unknown	gnl\|CDD\|235000
NZ_CP046722.1\|WP_022625536.1\|1808517_1809762_-\|membrane-integrity-lipid-transport-subunit-YebS	unknown	unknown	gnl\|CDD\|225542
NZ_CP046722.1\|WP_010258773.1\|1809976_1810477_+\|GAF-domain-containing-protein	unknown	unknown	gnl\|CDD\|224867
NZ_CP046722.1\|WP_158131635.1\|1803677_1804325_+\|serine/threonine-protein-phosphatase	unknown	unknown	gnl\|CDD\|236911
NZ_CP046722.1\|WP_010258750.1\|1798686_1799280_-\|transcriptional-regulator-BetI	unknown	unknown	gnl\|CDD\|179115
NZ_CP046722.1\|WP_010258739.1\|1794397_1794727_-\|multidrug/spermidine-efflux-SMR-transporter-subunit-MdtI	unknown	unknown	gnl\|CDD\|182618
NZ_CP046722.1\|WP_010258767.1\|1805915_1808549_-\|PqiB-family-protein	unknown	unknown	gnl\|CDD\|225553
NZ_CP046722.1\|WP_010258793.1\|1817551_1817824_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372856
NZ_CP046722.1\|WP_158131636.1\|1804326_1805760_-\|16S-rRNA-(cytosine(1407)-C(5))-methyltransferase-RsmF	unknown	unknown	gnl\|CDD\|183387
NZ_CP046722.1\|WP_010258758.1\|1803192_1803405_+\|DUF1272-domain-containing-protein	unknown	unknown	gnl\|CDD\|226334
NZ_CP046722.1\|WP_158131633.1\|1794713_1795064_-\|multidrug/spermidine-efflux-SMR-transporter-subunit-MdtJ	unknown	unknown	gnl\|CDD\|182471
NZ_CP046722.1\|WP_010670776.1\|1797199_1798672_-\|betaine-aldehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|183918
NZ_CP046722.1\|WP_010258753.1\|1799535_1801566_+\|choline-transporter	unknown	unknown	gnl\|CDD\|236635

Protein	Function_ID	Function_description	E-value
NZ_CP046722.1\|WP_158131634.1\|1801707_1803057_+\|MFS-transporter	gnl\|CDD\|341030	cd17477, MFS_YcaD_like, YcaD and similar transporters of the Major Facilitator Superfamily. This family is composed of Escherichia coli MFS-type transporter YcaD, Bacillus subtilis MFS-type transporter YfkF, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	5.29789e-88
NZ_CP046722.1\|WP_158131637.1\|1811294_1813334_+\|carboxy-terminal-processing-peptidase	gnl\|CDD\|236873	PRK11186, PRK11186, carboxy terminal-processing peptidase.	0
NZ_CP046722.1\|WP_010258776.1\|1810573_1811275_+\|RNA-chaperone-ProQ	gnl\|CDD\|235322	PRK04950, PRK04950, ProP expression regulator; Provisional.	3.77886e-123
NZ_CP046722.1\|WP_158131638.1\|1816280_1817072_+\|DNA-binding-transcriptional-regulator-KdgR	gnl\|CDD\|185046	PRK15090, PRK15090, DNA-binding transcriptional regulator KdgR; Provisional.	0
NZ_CP046722.1\|WP_061901379.1\|1814722_1816093_-\|MFS-transporter	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	1.45058e-52
NZ_CP046722.1\|WP_010258788.1\|1817102_1817339_-\|membrane-protein	gnl\|CDD\|372870	pfam13996, YobH, YobH-like protein. The YobH-like protein family includes the YobH protein from E. coli, which is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 80 amino acids in length. There are two conserved sequence motifs: GYG and GLGL.	3.41122e-38
NZ_CP046722.1\|WP_003852678.1\|1813578_1814460_+\|protease-HtpX	gnl\|CDD\|235478	PRK05457, PRK05457, protease HtpX.	0
NZ_CP046722.1\|WP_010258743.1\|1795493_1797176_-\|choline-dehydrogenase	gnl\|CDD\|235000	PRK02106, PRK02106, choline dehydrogenase; Validated.	0
NZ_CP046722.1\|WP_022625536.1\|1808517_1809762_-\|membrane-integrity-lipid-transport-subunit-YebS	gnl\|CDD\|225542	COG2995, PqiA, Uncharacterized paraquat-inducible protein A [Function unknown].	0
NZ_CP046722.1\|WP_010258773.1\|1809976_1810477_+\|GAF-domain-containing-protein	gnl\|CDD\|224867	COG1956, COG1956, GAF domain-containing protein [Signal transduction mechanisms].	3.39567e-76
NZ_CP046722.1\|WP_158131635.1\|1803677_1804325_+\|serine/threonine-protein-phosphatase	gnl\|CDD\|236911	PRK11439, pphA, protein-serine/threonine phosphatase.	8.51248e-96
NZ_CP046722.1\|WP_010258750.1\|1798686_1799280_-\|transcriptional-regulator-BetI	gnl\|CDD\|179115	PRK00767, PRK00767, transcriptional regulator BetI; Validated.	6.35592e-111
NZ_CP046722.1\|WP_010258739.1\|1794397_1794727_-\|multidrug/spermidine-efflux-SMR-transporter-subunit-MdtI	gnl\|CDD\|182618	PRK10650, PRK10650, multidrug/spermidine efflux SMR transporter subunit MdtI.	1.9457e-49
NZ_CP046722.1\|WP_010258767.1\|1805915_1808549_-\|PqiB-family-protein	gnl\|CDD\|225553	COG3008, PqiB, Paraquat-inducible protein B [General function prediction only].	0
NZ_CP046722.1\|WP_010258793.1\|1817551_1817824_+\|hypothetical-protein	gnl\|CDD\|372856	pfam13974, YebO, YebO-like protein. This short protein is uncharacterized. It seems likely to be of phage origin as it is found in Enterobacteria phage HK022 Gp20 and Enterobacteria phage HK97 Gp15. The protein is also found in a variety of enteric bacteria.	3.54365e-29
NZ_CP046722.1\|WP_158131636.1\|1804326_1805760_-\|16S-rRNA-(cytosine(1407)-C(5))-methyltransferase-RsmF	gnl\|CDD\|183387	PRK11933, yebU, rRNA (cytosine-C(5)-)-methyltransferase RsmF; Reviewed.	0
NZ_CP046722.1\|WP_010258758.1\|1803192_1803405_+\|DUF1272-domain-containing-protein	gnl\|CDD\|226334	COG3813, COG3813, Uncharacterized protein conserved in bacteria [Function unknown].	1.92491e-27
NZ_CP046722.1\|WP_158131633.1\|1794713_1795064_-\|multidrug/spermidine-efflux-SMR-transporter-subunit-MdtJ	gnl\|CDD\|182471	PRK10452, PRK10452, multidrug/spermidine efflux SMR transporter subunit MdtJ.	6.71722e-45
NZ_CP046722.1\|WP_010670776.1\|1797199_1798672_-\|betaine-aldehyde-dehydrogenase	gnl\|CDD\|183918	PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional.	0
NZ_CP046722.1\|WP_010258753.1\|1799535_1801566_+\|choline-transporter	gnl\|CDD\|236635	PRK09928, PRK09928, choline transport protein BetT; Provisional.	0

>NZ_CP046722.1|WP_158131636.1|1804326_1805760_-|16S-rRNA-(cytosine(1407)-C(5))-methyltransferase-RsmF
MPVSDASSLFPADFLSLMRQSLPDEASLAQFIAYSQQPLRRSIRVNTLKISVADFLSQTARYDWQLTPVPWCEEGFWISREDESLPLGSVAEHLSGLFYIQEASSMLPVTALFDAQPEVSAVMDMAAAPGSKTTQIAARMGNQGVILANEFSSSRVKVLHANISRCGVSNSALTHFDARVFGPALPEQFDAILLDAPCSGEGVIRKDADALKNWSLASTHEIAATQRDLLDSAFHALKPGGTLVYSTCTLNQIENQQVIAWLLERYPDAVEVVALDGLFEGAGQAATPEGYLHVFPQMFDSEGFFVARLRKTASVEPLPLPGYKVGKLPFSHLSRKLESEIAQAAAAVSLKWDASLELWQRDKEIWLFPKAVTPLLGKVRFSRIGLKLAETFAKGYRWQHEAVIALAKPDAAQTFELTAAEAEEWYRGRDIYPETEPTRNEMIVTYQQQPLGLAKKVGSRIKNSYPRELVRDGRLFR
>NZ_CP046722.1|WP_158131635.1|1803677_1804325_+|serine/threonine-protein-phosphatase
MYYQSLNGAAWRRIWVVGDLHGCRRELDALLQQHQFDPQLDLLISVGDIIDRGPDSLGCLALLEELWFRCVRGNHEEMALSALQGQEMALWQMNGGDWFFRLRGAALIAARHALQRCRELPLILHLQLDERIIVIAHADYPAREYALNKPLDWQQVVWSRQRLEAMESGERAGIRGADAFYFGHTPLKRSLTIANLHYIDTGAVFGNHLTMVQIK
>NZ_CP046722.1|WP_010258758.1|1803192_1803405_+|DUF1272-domain-containing-protein
MLELRPNCERCDVDLPPSSLAARICSFECTFCADCAEHLTHLCPNCGGELVRRPVRPAEKLQKYPAKMRS
>NZ_CP046722.1|WP_158131634.1|1801707_1803057_+|MFS-transporter
MGKIFSTFLPLYTTTLLMLLGSGLLTTYVSLRLASEQVNGALIGAIIAANYIGLVIGGKVGHNLIARVGHIRAYVACAGIITASVVGHGLTDFIPLWVFLRLIIGLCMMCQYMVLESWLNDQAESSQRGIIFGLYMVATYLGLSGGQVILSLQSGFGVSTLLIVALCFALCLVPIALTTRTHVRPMTPAPMELGYFIRTIPKLLGTTLVTGMAIGAFYGLAPVYGSSKGFTTSQTGYFMSLTIFAGLVSQFPLSWLSDRYDRQRLLFIIAMLFAVACVPLVVLPHLTFHWMIGIAFAASMMQFALYPLQVALANDQVAADRRVSLTACLLMAFGIGASIGPLVVGALMQPLGSNMLYLFFMLCALVIGGLSYVRAPGPLPTTEVPLPHVVMPDSLATSPLGAALIPTLEEEVIHASMGGQEPEEESAEFDDTADEEDLPDDLPEDQRHK
>NZ_CP046722.1|WP_010258753.1|1799535_1801566_+|choline-transporter
MNNPPAGEKDRLNPVVFYTSAGLILTFSLVTILYSELAASWILKAVNWVSATFGWYYMLAATLYIVFVLYMACSRFGSIKLGPEHSKPEFSVLSWSAMLFAAGIGIDLMFFSVAEPVTQYMQPPEGAGQTMEAARQAMVWTLFHYGLTGWSMYALMGIALGYFSYRYNLPLTIRSALYPIFGKRIYGPIGHTVDIAAVVGTIFGIATTLGIGVVQLNYGLKVLFDIPEGLTAQAALIVLSVVIATISVTSGVDKGIRILSELNVVMALGLILFVLFFGNTEFLLNALVLNVGDYINRFMGMTLNTFAFDRPTQWMNSWTLFFWAWWVAWSPFVGLFLARISRGRTIREFVLGTLIIPFTFTLLWLSVFGNAALYQIIHGNTEFAQEVMNHAERGFYSLLAQYPAFKLSASVATITGMLFYVTSADSGSLVLGNFTSRLKDINSDAPNWLRIFWSVAIGVLTLSMLMTNGITALQNTTVIMGLPFSFVIFFVMAGLFKSLKIEDHRRASATRDTAPYLAHATDRLTWKKRLSRLMNYPGSRYTQQMMEKTIYPAMQEVAKELELRDGRVTLESVEADESNPIGYLDLRVHLGEEQDFIYQVWPQQYSIPGFTYRARSGKSTYYRLETFLMEGSQGNDLMDYSKEQVIIDILDQYERHLNFIHLNREAPGSNISFPSA
>NZ_CP046722.1|WP_010258750.1|1798686_1799280_-|transcriptional-regulator-BetI
MPKVGMQPIRRRQLIDATLSTINEVGINDATIAQIARRAGVSTGIISHYFKDKNGLLEATMRDVTRQLREAVLSRLEPLAGASAEQRLCAIVEGNFDDTQVHTAVMKAWLDFWSSSMHQPQLNRLERVSSRRLYSTLVVEFRRELPLEKARLAAHGLAALIDGLWLRAALSGKPFNPVIALTLTTQFIRQQLAGEHE
>NZ_CP046722.1|WP_010670776.1|1797199_1798672_-|betaine-aldehyde-dehydrogenase
MSRFTEQKLYIDGAYVAAASGETFQTINPVNGEVLAEVHAAGQEDVNRAVAAARKGQKVWAAMTAMERSRILRRAVDILRERNDELAELEMLDTGKPYSETSAVDIVTGADVLEYYAGLVPALEGQQIPLRETSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEMTPLTALKLAEIYTEAGLPDGVFNVLPGIGSVTGQLLTEHPGIDKVSFTGGVVSGKKVMANAAGSTLKEVTMELGGKSPLIIFDDADLDLAADIAMMANFYSSGQVCTNGTRVFIPAKLQAAFEAKISERVARIQAGDLRDPATNFGPLVSFSHRDNVMRYIESGIAEGARVLCGGKRLTGGDFDQGAWVAPTVFTDCRDEMKIVREEIFGPVMSILSYESEEEVIRRANDTEFGLAAGLVTQDLNKAHRVIHQIEAGICWINTWGESAAEMPVGGYKHSGIGRENGLMTLQSYTQVKSVQVELTRFQSVF
>NZ_CP046722.1|WP_010258743.1|1795493_1797176_-|choline-dehydrogenase
MEFDYIIIGAGSAGNVLATRLTEESNVSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRYNWAYETEPEPYMNNRRMECGRGKGLGGSSLINGMCYIRGNAMDLDNWASEPGLENWSYLDCLPYYRKAETRDIGPNDFHGGDGPVCVATPKAGNNVLFEAMIEAGVQAGYPRTDDLNGYQQEGFGPMDRTVTPNGRRSSTARGYLDMAKGRANLKIITHATTDRIIFDGKRAVGVEYLQGDSNTINKVTARREVLLCAGAIASPQILQRSGVGSPELLKQFDIPLVHDLPGVGENLQDHLEMYLQYECKEPVSIYPALKWWNQPKIGAEWMFNGTGIGASNQFEAGGFIRSREEFSWPNIQYHFLPVAINYNGSNAVDAHGFQCHVGSMRSPSRGHVRLKSRDPRRHPAILFNYMSHEQDWHEFRDAIRITRQIINQPALDKYRGREISPGLDCQTDEQLDEFVRNHGETAYHPCGTCKMGNDPMSVVDGEGRVHGLEGLRVVDASIMPLIITGNLNATTIMIGEKIADKIRGRDPLPRSTAAYYVAGDAPVRTVPQRAE
>NZ_CP046722.1|WP_158131633.1|1794713_1795064_-|multidrug/spermidine-efflux-SMR-transporter-subunit-MdtJ
MRAWVLLSLAIVTEIIGTLFMKWSSINGSHSGYLMMLGMIACSYILLSFAIKRIALGVAYALWEGIGIMLITLFSVQLFGETLSALKICGLVTLIVGIVLIKTGTQSSAEVNHAHR
>NZ_CP046722.1|WP_010258739.1|1794397_1794727_-|multidrug/spermidine-efflux-SMR-transporter-subunit-MdtI
MLIADLVHASWLALAIVLEIAANIFLKYSDGFKKPLYGLLSLCCVLLAFSALAQAVKGIDLSIAYAVWGGFGIIATVAAGWVLFGQRLNRKGWAGLTLLLAGMILLKLA
>NZ_CP046722.1|WP_010258767.1|1805915_1808549_-|PqiB-family-protein
MQQETPTTPTNATLRNKRKISPFWLLPIIAMLIACWLLWTNYQERGTTITINFQTADGIVPGRTPIRYQGVEVGTVQGINLSDDYRSIQIKASIKSDMRDALREDTQFWLVTPKASLAGVSGLDALVGGNYIGMMPGKGKPSESFTALDTQPKYRVNTGELMIHLHAPDLGSLNTGSLVYYRKIPVGRVYDYSINSKSDGVSIDVLIDRRFINLVKTNSRFWNVSGMNADVSLSGAKVQLESLAALVNGAIAFDSPQGAETAKAEQNYRLYPDLAHSQRGVQITLDLPNGNNLKAGSTPLMYQGLEVGTLTKLNLQDGGKVTGELTIDPSVVGLMRSGTRIEMHSPKISLTDTSLSALLTGNTLELVPGEGEPQQHYTVLASNETLLQKPNVLTVKLSAPESYGIDQGQPLMLHGMQIGQVMSRTLDENGVNFVVAVNPENRNLVHGDSKFIVNSRLDVKFGLDGMQVLGASAREWVDGGIRLDPGKKGEPKSAYPLFADAEKAEEGITGDGPSTTLMLTANSLPDVQAGSVVLYRKFQVGEIVKVTPRADAFDIAVHIQPEYRKLLTSESVFWAEGGARVSLNGSGLTVQASPLNRALKGAISFDNMSGAQSAKGAKRVLYPSETAARAVGSQITLHTYDASKLSAGMPIRYLGINVGQVESLSLSKDNNQVVAKAVLYPEYVNDFARLGSRFSVVSPEISATGVNHLETLLQPYVNVDPGKGGAARTFELQESTITDSRYLNGLNIYVDATEAGSLSLGTPVLFRGVEVGTVTGTSLGNMADRVQIALRISKKYQHLVRNNSVFWLASGYNLDFGLVGGVVKTGTFQQFIRGGIQFATPPTVPLAPQANPDKHFLLQDEAPKDWRNWGTAIPSPR
>NZ_CP046722.1|WP_022625536.1|1808517_1809762_-|membrane-integrity-lipid-transport-subunit-YebS
MKIHAISQTLPHARYQRCPQCDTLFSLPDVKSHQSAHCPRCNAEILSGRDWPMTRLMAMAATMIVLMPFAFSLPLVDIRLLGMRINASVLEGIIQMTQQGDVLTASMVAFCTIGAPVTLVAGICYLGIGHRLGMNLRPVLLMLEKLKEWVMLDIYLIGIAVASIKVQDYASLEIGYGLAAYIALTVLSVLTLIHLNMEQLWEHFYPQTPGNMARDDMQVCLNCHNTSIPDERGRCPRCHTPLDFRRRHSLQKSWAALIASIVLLIPANLMPISVVYLNGSRREDTIFSGILGLGEGNIPVAAIVFIASILVPFIKVLVMLTLLLSIHFRCEQGLRTRIRLLRFVTWVGRWSMLDLFVISLTMSLVNRDQLLAFTMGPAALFFGAAVILTIMSVEWLDSRLLWDAHATGNADYTD
>NZ_CP046722.1|WP_010258773.1|1809976_1810477_+|GAF-domain-containing-protein
MNKTAFYADLNRDMRALLAGETAFLAAMGNFSALLYERLDGVNWAGFYLLTEADTLVLGPFQGKIACVRIPVGKGVCGTALAEEKVQRVDDVHAFPGHIACDAASNAEIVIPLKVNGTVVGVLDIDSVAYNRFDSDDESGLVTLTDGLCEVLANSDLEKYLQLTRS
>NZ_CP046722.1|WP_010258776.1|1810573_1811275_+|RNA-chaperone-ProQ
MENQPKLNSSKEVITFLAERFPHCFSAEGEARPLKIGIFQDLVERVQGEMGLSKTQLRSALRLYTSSWRYLYGIKAGAIRVDLDGNACGVLDEQHVEHARKQLEEAKARVQAQRDQQRAARREAGESEEGAAPRRPRKPAARKPAEGEAARKPRPQTTAPRATASQHRKPAPRPEQEARPITDTSTLQPGQSIKVKAGKSAMDATVLEVSKDGVRVQLASGMAMIVRAEHLQF
>NZ_CP046722.1|WP_158131637.1|1811294_1813334_+|carboxy-terminal-processing-peptidase
MNTLFKVGLIAGLLLAGPTFGAENITRADQIPQLHEDPQDPTVSERVTSRFTRSHYRQFDLDQNFSAKIFDRYLNMLDYSHNVLLASDVAQFASKKTTVGDELRSGKLDLFYDIYNLAQKRRFERYQYALTVLARPMNFSGNDTIDIDRAKAPWPKDQSELNALWDAKVKYDQLSLKLAGKDDHEIRDVLTKRYNFAIRRLAQSNGEDVFQLVMNAFAREIDPHTSYLSPRNTEQFNTEMSLSLEGIGAVLQMDDDYTVINSMVAGGPAAKSKAITVGDRIVGVGQPGKPMEDVIGWRLDDVVAKIKGPKGSKVRLEVLPAGKGTKTRTVTLTREKIRLEDRAVKLTIKNVGKQKVGVLDIPGFYVGLTDDVKVQLQKLQKQNVDSVVIDLRTNGGGALTEAVSLSGLFIPSGPVVQVRDNNGRIREDSDNDGVVYYKGPLVVLVDRFSASASEIFAAAMQDYGRAVIVGEPTFGKGTVQQYRSLNRIYDQMLRPEWPALGSVSYTIQKFYRINGGSTQRKGVTPDLLMPTGVEAAETGEKFEDNALPWDSIKAATYVKTGDVKPLVVQLTKQHADRIAQDREFQYIMKDIARYNALKDKRNIVSLNLAQREKENHEDDASRLERVNARYQAEGKKPLKNLDELPKDYKEPDPYLDETVKIANDLAQLEKSQPEAPAAK
>NZ_CP046722.1|WP_003852678.1|1813578_1814460_+|protease-HtpX
MMRIALFLMTNLAVMLVFGLILSLTGIQSSSVQGLMIMAGLFGFGGAFVSLLMSKWMALRSVGGEVIEQPRNETERWLVDTIGRQAQQAGIAMPQVAIYHAPDINAFATGARRNASLVAVSTGLLQNMSRDEAEAVLAHEVSHIANGDMITMTLIQGVVNTFVIFVSRILAQIAAGFMSGNRDGEESSNGNPLVYFAVSMVLELVFGILASIITMWFSRHREFHADAGSAKLVGREKMIAALQRLKTSYEPQEPSSMMAFCINGKGKSFSELFMSHPPLDKRIEALRSGQYLK
>NZ_CP046722.1|WP_061901379.1|1814722_1816093_-|MFS-transporter
MTLSPPQDGLPARQRYMAIVTIALGLTMAVLDGAIANVALPTISRELNASPAQSIWIVNAYQIAIIVSLLSLSFLGDMLGYRRVYQAGLALFIATSLFCAFSTTLTMLTFARVLQGLGGAALMSVNTALIRIIYPQRHLGRGMAINSLVVAVSTAAGPTVAAAILSVASWKWLFLINVPLGAIALWLALRTLPDNPQKATAQKFDVPSAIMNALFFGLIISALSGFAQGQSHLLVLSEVIALLVVGWFFIRRQLNMAVPLLPVDLLRIPIFSLSMGTSVCSFCAQMLAMVSLPFFLQNVLQRDEVATGLLLTPWPLATMVFAPIAGRLIERVHAGLLGGIGLAIFALGLFLLAWLPANPGDGDIIWRMMLCGAGFGLFQSPNNHTIVTSAPRHRSGGASGMLGTARLLGQSMGAALVALMFNLFDERGTHASLLLAGSFAAVAALVSVSRMTQTRA
>NZ_CP046722.1|WP_158131638.1|1816280_1817072_+|DNA-binding-transcriptional-regulator-KdgR
MSSAENDKQPDSVSSVLKVFGILQALGEERDQGITELAQRVMMSKSTVYRFLQTMKSLGYVTQEGESEKYSLTLKLFELGAKALQNVDLIRSADVQMRELSRLTKETIHLGALEEDSIVYIHKIDSLYNLRMYSRIGRRNPLHTTAIGKVLLAWRDRSEVEEILRDVEFKRSTANTLLSAEALITALDQVRTQGYGEDNEEQEEGLRCLAVPVFDRFGVVIAGLSISFPTIRFSEDARQDYVAMLHRAARTLSSEMGYHDYPF
>NZ_CP046722.1|WP_010258788.1|1817102_1817339_-|membrane-protein
MKLFIRTVGLLAVIWLAMLFTGYGVLTGSTKNAAGLGLQCSYLTARGVISAQYLHTDSGVVGVTDCPLLKKSGEVIDN
>NZ_CP046722.1|WP_010258793.1|1817551_1817824_+|hypothetical-protein
MNELAANSGPLVSYGLLVIILIVAFIAWFFVNRASVRAGEQIRLLESLLEEQKKQNQLLRRLIEMQPGAESKKTDDDREKRDFIRLIPER

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Crispr_ID: NZ_CP046722_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046722_3

3035746-3035852

Orphan

Consensus_repeat	Method
AAAAACGCCGGGAGCGTTTTTGAACAACGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP046722_3

>merge|NZ_CP046722|3|3035746-3035852|CRISPRCasFinder
AAAAACGCCGGGAGCGTTTTTGAACAACGCGAAGCGTTGGCCCGGCTAGTACGCACCTCAGGGATGAGGTGCGTACTAAAAACGCCGGGAGCGTTTTTGAACAACGC

>NZ_CP046722|3|3|3035746-3035852|CRISPRCasFinder
AAAAACGCCGGGAGCGTTTTTGAACAACGC	GAAGCGTTGGCCCGGCTAGTACGCACCTCAGGGATGAGGTGCGTACT
AAAAACGCCGGGAGCGTTTTTGAACAACGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046722.1\|WP_003850423.1\|3044061_3044394_-\|YbaB/EbfC-family-nucleoid-associated-protein	unknown	unknown	gnl\|CDD\|234669
NZ_CP046722.1\|WP_158131940.1\|3031630_3033397_-\|bifunctional-UDP-sugar-hydrolase/5'-nucleotidase	unknown	unknown	gnl\|CDD\|236566
NZ_CP046722.1\|WP_089414511.1\|3039210_3040071_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046722.1\|WP_158131938.1\|3029729_3030209_+\|Cys-tRNA(Pro)/Cys-tRNA(Cys)-deacylase-YbaK	unknown	unknown	gnl\|CDD\|182634
NZ_CP046722.1\|WP_010671234.1\|3025231_3025678_+\|NfeD-family-protein	unknown	unknown	gnl\|CDD\|224501
NZ_CP046722.1\|WP_010671229.1\|3031164_3031596_+\|multidrug/biocide-efflux-PACE-transporter	unknown	unknown	gnl\|CDD\|226610
NZ_CP046722.1\|WP_158131941.1\|3036003_3037305_-\|inosine/guanosine-kinase	unknown	unknown	gnl\|CDD\|185033
NZ_CP046722.1\|WP_003850420.1\|3043456_3044062_-\|recombination-protein-RecR	unknown	unknown	gnl\|CDD\|234616
NZ_CP046722.1\|WP_010671227.1\|3033927_3035622_+\|Kef-family-K(+)-transporter	unknown	unknown	gnl\|CDD\|182633
NZ_CP046722.1\|WP_158131937.1\|3026167_3028681_+\|copper-exporting-P-type-ATPase-CopA	unknown	unknown	gnl\|CDD\|182635
NZ_CP046722.1\|WP_158131942.1\|3037363_3038323_-\|ferrochelatase	unknown	unknown	gnl\|CDD\|234585
NZ_CP046722.1\|WP_029519428.1\|3041484_3043359_-\|molecular-chaperone-HtpG	unknown	unknown	gnl\|CDD\|235366
NZ_CP046722.1\|WP_010259065.1\|3024317_3025232_+\|SPFH/Band-7/PHB-domain-protein	unknown	unknown	gnl\|CDD\|223407
NZ_CP046722.1\|WP_158131939.1\|3030205_3031075_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_CP046722.1\|WP_158131943.1\|3044449_3046549_-\|DNA-polymerase-III-subunit-gamma/tau	unknown	unknown	gnl\|CDD\|236138
NZ_CP046722.1\|WP_022626103.1\|3040257_3041127_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182990
NZ_CP046722.1\|WP_010259067.1\|3025665_3026070_-\|Cu(I)-responsive-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182320
NZ_CP046722.1\|WP_010255934.1\|3038436_3039081_-\|adenylate-kinase	unknown	unknown	gnl\|CDD\|234711
NZ_CP046722.1\|WP_064704609.1\|3028752_3029556_+\|conjugal-transfer-protein-TraB	unknown	unknown	gnl\|CDD\|226258
NZ_CP046722.1\|WP_010671221.1\|3046707_3047259_-\|adenine-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|235028

Protein	Function_ID	Function_description	E-value
NZ_CP046722.1\|WP_003850423.1\|3044061_3044394_-\|YbaB/EbfC-family-nucleoid-associated-protein	gnl\|CDD\|234669	PRK00153, PRK00153, YbaB/EbfC family nucleoid-associated protein.	2.69281e-45
NZ_CP046722.1\|WP_158131940.1\|3031630_3033397_-\|bifunctional-UDP-sugar-hydrolase/5'-nucleotidase	gnl\|CDD\|236566	PRK09558, ushA, bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed.	0
NZ_CP046722.1\|WP_158131943.1\|3044449_3046549_-\|DNA-polymerase-III-subunit-gamma/tau	gnl\|CDD\|236138	PRK07994, PRK07994, DNA polymerase III subunits gamma and tau; Validated.	0
NZ_CP046722.1\|WP_158131938.1\|3029729_3030209_+\|Cys-tRNA(Pro)/Cys-tRNA(Cys)-deacylase-YbaK	gnl\|CDD\|182634	PRK10670, PRK10670, Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK.	1.07616e-102
NZ_CP046722.1\|WP_010671234.1\|3025231_3025678_+\|NfeD-family-protein	gnl\|CDD\|224501	COG1585, COG1585, Membrane protein implicated in regulation of membrane protease activity [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion].	8.31144e-34
NZ_CP046722.1\|WP_010671229.1\|3031164_3031596_+\|multidrug/biocide-efflux-PACE-transporter	gnl\|CDD\|226610	COG4125, COG4125, Predicted membrane protein [Function unknown].	7.08935e-54
NZ_CP046722.1\|WP_158131941.1\|3036003_3037305_-\|inosine/guanosine-kinase	gnl\|CDD\|185033	PRK15074, PRK15074, inosine/guanosine kinase; Provisional.	0
NZ_CP046722.1\|WP_003850420.1\|3043456_3044062_-\|recombination-protein-RecR	gnl\|CDD\|234616	PRK00076, recR, recombination protein RecR; Reviewed.	2.33658e-119
NZ_CP046722.1\|WP_010671227.1\|3033927_3035622_+\|Kef-family-K(+)-transporter	gnl\|CDD\|182633	PRK10669, PRK10669, putative cation:proton antiport protein; Provisional.	0
NZ_CP046722.1\|WP_158131937.1\|3026167_3028681_+\|copper-exporting-P-type-ATPase-CopA	gnl\|CDD\|182635	PRK10671, copA, copper-exporting P-type ATPase CopA.	0
NZ_CP046722.1\|WP_158131942.1\|3037363_3038323_-\|ferrochelatase	gnl\|CDD\|234585	PRK00035, hemH, ferrochelatase; Reviewed.	5.90269e-157
NZ_CP046722.1\|WP_029519428.1\|3041484_3043359_-\|molecular-chaperone-HtpG	gnl\|CDD\|235366	PRK05218, PRK05218, heat shock protein 90; Provisional.	0
NZ_CP046722.1\|WP_010259065.1\|3024317_3025232_+\|SPFH/Band-7/PHB-domain-protein	gnl\|CDD\|223407	COG0330, HflC, Membrane protease subunits, stomatin/prohibitin homologs [Posttranslational modification, protein turnover, chaperones].	1.76379e-76
NZ_CP046722.1\|WP_158131939.1\|3030205_3031075_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	8.37085e-40
NZ_CP046722.1\|WP_022626103.1\|3040257_3041127_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|182990	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional.	7.08827e-69
NZ_CP046722.1\|WP_010259067.1\|3025665_3026070_-\|Cu(I)-responsive-transcriptional-regulator	gnl\|CDD\|182320	PRK10227, PRK10227, HTH-type transcriptional regulator CueR.	6.97823e-76
NZ_CP046722.1\|WP_010255934.1\|3038436_3039081_-\|adenylate-kinase	gnl\|CDD\|234711	PRK00279, adk, adenylate kinase; Reviewed.	7.48458e-136
NZ_CP046722.1\|WP_064704609.1\|3028752_3029556_+\|conjugal-transfer-protein-TraB	gnl\|CDD\|226258	COG3735, COG3735, Uncharacterized protein conserved in bacteria [Function unknown].	7.70609e-76
NZ_CP046722.1\|WP_010671221.1\|3046707_3047259_-\|adenine-phosphoribosyltransferase	gnl\|CDD\|235028	PRK02304, PRK02304, adenine phosphoribosyltransferase; Provisional.	1.58577e-99

>NZ_CP046722.1|WP_010671227.1|3033927_3035622_+|Kef-family-K(+)-transporter
MHHTTPLITTIVGALVLAFLLGMLANRLRISPLVGYLMAGVLAGPFTPGFVADTNLAPELAELGVILLMFGVGLHFSMKDLMSVKSIAIPGAIAQIAVATLLGMGLSWTMGWSWMTGLVFGLCLSTASTVVLLRALEERQLIDSQRGQIAIGWLIVEDLVMVLTLVLLPAIAGMMEQGNASAGLLAWDLLWTIGKVAAFMVLMMVVGRRAVPWILARSAATGSRELFTLAVLALALGIAFGAVEFFDVSFALGAFFAGMVLNESELSHRAARDTLPLRDAFAVLFFVSVGMLFDPSILVTQPLAVLGALVIIVVGKSVAAWLLVSLLGHSRRTALTISVSLAQIGEFAFILAGLGISLGLLTDEGRNLVLAAAILSIMLNPILFTLLERFLAKTETMEEQTLEEAIEEEKQIPVDFCNHAVIVGYGRVGSLIGQKLLEANVPLVVVENSRARVEALRERGIKAVLGNAARADTMELARLDCARWLLLTIPNGYEAGEVVTAAREKHQNIEIIARAHYDDEVEYIMERGATRVVMGEREIASSMLQILQDEMTQGEDLQPCDVVR
>NZ_CP046722.1|WP_158131940.1|3031630_3033397_-|bifunctional-UDP-sugar-hydrolase/5'-nucleotidase
MLLSKWTGAGVALLVALMPLFSQAAQADRTYRFSLLHTNDEHGHFWFTEQGEYGLAAQKTLMDTMRYDVQSRGGGALILSAGDVNTGVPESDELDAEPDFRAMNLIGYDAMALGNHEFDKPIAVLRKQEKWARFPLLAANVYQKSTGQRLFKPWAVFNRLGLKIAVVGLITPDTAKLANPAGLTDTEFRDPIAEAEKAVAELRATEKPDVIVALTHLGHYDDGKHGSNGIDDVTLARSLPAGTIDLIVGGHSHDAVCMEKENVSVKNYQPGQPCKPDQQNGIWIMQADKWGKYVGRGDFTFRNGQVTLEAYQLVPVNLKHQIKNADGSETWLTWQEEIPKNTAMMKLLMPFQKRAEAKLTVNVGSADGSFSGEKEQVRFEQTNLGQLILRAQMAHTKADFAVMSGGGIRTSLKSGKLSWRDLLQVQPFGNQVVSVSLTGAEIKKYLDVVANIQPDSGGYAQFAGISLTADGKHVSDVSINGKPLQDAQHYRMATNSFNAAGGDGYPRLDNHAGYLNSGAVDAQVLRDWIKTHSPVKASDYQPKGLIVHLTDEQIRARDEAAEKARKRNYPKMILAWIWPWGNETAATH
>NZ_CP046722.1|WP_010671229.1|3031164_3031596_+|multidrug/biocide-efflux-PACE-transporter
MRTRSLKERILHAVCFETLAILTVSPLAAWAMNKPLFQMGSLAIMLSTVAMLWNMIYNSGFDRLYAPGQKRGPGVRVLHALGFEGGFILIGLPIAAWMLDISLGQAFLVEVAFFLFFLPYTMAYNWVWDKLRERWIRRHACRA
>NZ_CP046722.1|WP_158131939.1|3030205_3031075_-|LysR-family-transcriptional-regulator
MRYSPESLEAFMQTVASGSFSAAARALGKSQSTISAAVASFEDDLGFALFERAGRQPVLTEQGRRVIPQVQQILAASERLDALAIRLSQGVEPRLSFAMSDFWQTDHHEHLLRQFDARYPEIELEVMIAEDGDVLDLLQAGRVHLGVVRAQPNLPVDIAVARLQVEAQMAVFLHRDHPLAQLKTLSESELEGVRHLRLNTWVEASEPAPMGRIWSAPTYLLLLEMAEQGFGWTILPRWLVKQFGHGVLKELSMPGWPQHIAIEVVWSRRTPPGPAGRWMIDQLCAQPRV
>NZ_CP046722.1|WP_158131938.1|3029729_3030209_+|Cys-tRNA(Pro)/Cys-tRNA(Cys)-deacylase-YbaK
MTPAVKLLEKQKVSFTLHPYEHDSSETHFGDEAVRKLNLDARQVYKTLLVTLNGEAKQLAVAITPVSTQLDLKKVAKALGAKKADMADPQLAQRVTGYLVGGISPLGQKKRLPTVIDHSASAFDAMFISGGKRGLDIELAPRDLSRLLDAPFADIARHG
>NZ_CP046722.1|WP_064704609.1|3028752_3029556_+|conjugal-transfer-protein-TraB
MTGNIWRSLRGFISQLFPASYRWPAMDVRLGDRQLHLVGSIHMGTRDMQPLPARLLRQLQQADALIVEADITQGGSPFDHHGDRPALSTRLDSHAMQTLTALCQEMSLNLSLFDNLPAWQVALMLQAQQAQRLGLRPDYGIDYQLLQAAKGLNKPVIELEGAEAQIALLTALPDDGMALLQDTLLHWHTNARLLQMMVSWWLDTPPRQPEITLPATFSQALNDTLIGQRNAQWRDRLQGLSAGNYVVAVGALHLYGEDNLPEMLKKP
>NZ_CP046722.1|WP_158131937.1|3026167_3028681_+|copper-exporting-P-type-ATPase-CopA
MSHTISLALDGLSCGHCVKRVKEALEQRDDVDQADVTQQEAQVSGHADAAALIATVEQAGYHATLKTADASPKSEPLTASEPPPEALTTETASRPAGTTLPTHMLLIEGMTCASCVSRVEKALQQVAGVSQARVNLGERSALVLGDADPQQLVAAVDAAGYGAQVVDDEQERREKQQLSARSAMRRFSWQAAVALAFGLPLMIWGMVGDNMMLTDHNHGVWLTLGIVTLLIMIVTGSHFYRSAWRSLRNGSATMDTLVALGTGAAWIYSFSVVLWPDFFPPQARHLYFEASVMILGLINLGHALEQRARQRSSKALERLLDLTPAQARQVDQQGDRLIPVSEVQPGMTLRLVTGDRVPVDGEIATGEAWFDEAMLTGEAVPQSKTPGAAIFAGTLVQDGSVEFIARATGNHTTLSRIIRLVRQAQSSKPDVGRLADRISAVFVPVVVLIALLSGAVWYLFGPQPQIAYMLVIATTVLIIACPCALGLATPMSIIAGVGRAAELGVLVRDADALQRASQIDTLVFDKTGTLTAGRPQVSDVQVWGDATRESVLATAAALEFASGHPLAKAIVAEAKLTQPPLLAQFRTIRGKGVSGSLDGRTLLLGNAALMQDNGVDYQAAEAEIARLTQQGATPVLLAEQGQLTGLIALRDQLRPESSAALKRLHQQGYRLIMLTGDHENTARAIAAEVGIDEVIAGVMPEGKAAAIEHLQQQGRRVAMVGDGINDAPALAQADVGIAMGGGSDVAVETAGITLMRADLNSVADALALSSATLRNIRQNLFGAFIYNSIGIPVAAGVLYPLTGTLLSPIVAGAAMALSSITVVSNANRLLRYRPPRE
>NZ_CP046722.1|WP_010259067.1|3025665_3026070_-|Cu(I)-responsive-transcriptional-regulator
MNISDVAKKTGLTSKAIRFYEEKGVVTPPLRSENGYRSYNGHHLEELNLLRQARQVGFTLDECRELVALFNNPSRHSADVKARTLQKADEIAAHIEELHVMRARLLALAEACPGDDGAECPIINNLAGCCGQRG
>NZ_CP046722.1|WP_010671234.1|3025231_3025678_+|NfeD-family-protein
MLVDIIAHPHWFWLTLGGLLLAAEMLGTSGYLLWSGLAAVIVGLIEWFVPVSWTAQGSLFAVLTLICVFLWYRWMRHREARQKPNALNQRGSQMIGLQLTLDTALHNRTGHVRIGDSSWRVEAEQDLPAGTAVVVTGIEGITLRIQPR
>NZ_CP046722.1|WP_010259065.1|3024317_3025232_+|SPFH/Band-7/PHB-domain-protein
MITVIPALIILALVAVWATVKIVPQGFQWTVERFGRYTRTLQPGLSLVVPFMDRVGRKINMMEQVLDIPSQEIISKDNANVTIDAVCFIQVVDPARAAYEVSNLEQAILNLTMTNMRTVLGSMELDEMLSQRDSINTRLLHIVDEATNPWGVKITRIEIRDVRPPQELIGAMNAQMKAERTKRADILTAEGVRQAAILRAEGDKQSQILKAEGERTSAFLQAEARERQAEAEANATKMVSEAIASGDIQAINYFVAQKYTDALQKIGEANNSKVVMMPLEASSLLGSIAGIGELLKESRTESKR
>NZ_CP046722.1|WP_158131941.1|3036003_3037305_-|inosine/guanosine-kinase
MKFPGKRKSKHYFPVSARDPLLQPAQHDVDAGSWVVGIDQTLVDIEAKVDDAFLARYGLSAGHSLVIDNAVAEALYNELMQEALITHQFAGGTIGNTLHNFSVLADDRSVLLGVMCNNIQIGGYAYRYLCNTSSRVDLNYLQGVDGAIGRCFTLIGEHGERTFAISPGQMNQLHPDNVPEEVIAGASALVLTSYLVRCAEGEPMPQATLRAIEYAKRHNVPVVLTLGTKHVIGDNPQFWRDFLREHVSIVAMNEEEALALTGESDPLLAANMALDWVDLVLCTAGPIGLYMAGYTEEEFKRKTNHPLLPGAIAEFNQYEFSRVMRQQDCQQPLRIFSHIAPYMGGPEKIMNTNGAGDGALAALLHDITANNYHSLNVPNSSKHTRPYLTYSSLAQVCKYANRVSYQVLNQHSPRLTRGLPEREDSLEESYWDR
>NZ_CP046722.1|WP_158131942.1|3037363_3038323_-|ferrochelatase
MRQDKAGVLLVNLGTPDAPTTPAVKRYLKQFLNDPRVVDAPRWLWWPVLNAVILPFRSPRVSKLYSSVWMEGGSPLLVYSMRQRDALAARVDMPVEVGMSYGNPSLKSAVDKLMAQGVTRLIVLPLYPQFSCSTVAAVWDGLTAVFKDYRSLPDVQFIRDYAEHPAYIAALKATVERSFERHGQPDLLVLSFHGIPQRFANEGDDYPQRCADTTAALVKALGLRDDQYMMTFQSRFGREPWLMPYTDKTMESLPAKGIKHVQVMSPGFSSDCLETLEEISGENCEIFMHAGGEKFEYIPALNADEAHIDMMVQLVDARR
>NZ_CP046722.1|WP_010255934.1|3038436_3039081_-|adenylate-kinase
MRIILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKAGSELGNQAKAIMDAGKLVTDELVIALVKERITQEDCKNGFLLDGFPRTIPQADAMKEAGITVDHVLEFAVPDELIVERIVGRRVHTPSGRVYHVTFNPPKVEGKDDVTGEELTMRKDDQEETVRKRLVEYHQMTAPLIAYYSNEAEAGNTAYHKIDGTRKVTEVSAELAKILG
>NZ_CP046722.1|WP_089414511.1|3039210_3040071_-|hypothetical-protein
MAHCSLSSETSAEARHRLRLALSRFYRLEQFDLFFAPSLHVAQVLLSQLFLRQEQARNQHRYASHFPVTELNILPAVPLIAGSIMLVPHVELPNGRVRPLRDCQNQGVTEASESFASVLHQKLIDEAHLFVTRLDRHAEICSDLVLVALRTHDFSTLVRSELRLFEQGLTLTATHEALRRFDDPHWRPYNAATVDALSLSDPLPLNSCHQPGLPFASFNVPASVITSLSDAEDVVKWPQQARLLLNANVRGSGKKSVNMTHHLSRRLQFLLGSGGKSEKASGRPGG
>NZ_CP046722.1|WP_022626103.1|3040257_3041127_+|LysR-family-transcriptional-regulator
MNGLPPLRALHYFHQAALHSSFSVAAEHLHVTHSAISHQIRQLESWMGKPLFVRSHGRVKLTSHGERLLLSCQQAFSELRSSCESIRTGLLQQIRVSCAPSFLSQWLIPRIASFYQRYPEIEVHFQPLTQISQLRSEHVDVLILSHGEPPESDIDATLVSEDEIGPLCAPHFASQLRVGEDLAAMPLLHADTRLHAWSEWADKAGVSGRFNGGKHFESLTLGIQAARSGLGVLMAPRLLVRKELEDGTLLAPLGFVRVERATWMMTKQSRRHDTEISLFRDWLQDAAKP
>NZ_CP046722.1|WP_029519428.1|3041484_3043359_-|molecular-chaperone-HtpG
MTMKGQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSDSSLYEGDGELHVRLSVDKDNRTITLSDNGIGMRRDEVIENLGTIAKSGTKSFLESLGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGASAEEGVFWESAGEGEYTLAEIEKADRGTEITLHLREGEDEFLDAWRVRNIISKYSDHIALPVEIESKDEEGEGTHWEKINKAQALWTRNKSEISDEEYNEFYKHIAHDYSDPVAWSHNRVEGKQEYTSLLYIPARAPFDMWNRDQKHGLKLYVQRVFIMDDAEQFMPNYLRFVRGLIDSNDLPLNVSREILQDSRVTQSLRAALTKRTLQMLEKLAKDDNEKYQTFWNEFGLVLKEGPAEDHANQETIAKLLRFATTQSEGSAQTISLEDYVSRMVEGQEKIYYITADSYAAAKSSPHLELFRKKGIEVLLLSDRIDEWMMSYLTEFDGKTFQSVSKADESLSKLADEETEEQKEAEKALEPFVERVKTLLGERVKEVRLTHRLTDTPAIVTTDANEMTTQMAKLFAAAGQEVPEVKYLFEINPDHPLVKRVADTQDEARFGEWIELLLDQALLAERGTLDDPNQFIRRMNQLLTA
>NZ_CP046722.1|WP_003850420.1|3043456_3044062_-|recombination-protein-RecR
MQTSPLLESLMESLRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQALTRAMSEIGHCADCRTFTEQEICTICANPRRQQNGQICVVESPADIHAIEQTGQFGGRYFVLMGHLSPLDGIGPADIGLDRLEQRLESETLQEVILATNPTVEGEATANYIAELCGQYGVDASRIAHGVPVGGELEMVDGTTLSHSLAGRQKFKF
>NZ_CP046722.1|WP_003850423.1|3044061_3044394_-|YbaB/EbfC-family-nucleoid-associated-protein
MFGGKGGLGNLMKQAQQMQDKMAKVQEEIAAIEVTGESGAGLVKVTINGAHNCRRVEVDPSLLEDDKDMLEDLIAAAFNDAARRIDETQKEKMASVSSGMQLPPGFKMPF
>NZ_CP046722.1|WP_158131943.1|3044449_3046549_-|DNA-polymerase-III-subunit-gamma/tau
MSYQVLARKWRPQAFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTTIARLLAKGLNCETGITATPCGQCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPSHVKFLLATTDPQKLPVTILSRCLQFHLKALDVDQIRQQLEHVLKQEQIESETRALQLLARAADGSMRDALSLTDQAIAMGQGAVTSSTVSVMLGTLDDEQPLGLLEALVDGDGQQVMNLLSQAASRGVEWEALLVEMLRLLHQIAMVQLLPTSLNDDDESNALRLRELARVVPPADLQLYYQTLLMGRKDLPIAPDRRMGVEMTLLRALAFHPKAAVAEPIARPALTQQTAPVAPAQTSPAASGPSPLARQPAAQPASPSPAAAAPPSHTASPVAQQTQQQMPEQTQQQVAAQPQMAAPDAAPQHSPSPDVAPDTALSSSTSQLLQARTQLLRQGANKPKKREPAAPGARPANSALERLASVTERSQQRIRDREPAAPVKEEAYRWKAVNQPVEVAEPVATPKALRSALEHEKTPELAARLAEEAQQRDPWAAEIAILPLPKLVQQLALNAWKETTESGVCLHLRSSQRHLNSPSAQQVLSDALSQHAGQRVELSVVEDDNSSVLTPLEWRQAIYEEKLAQARQSITCDTHIQTLQRFFDADLDEESIRPV
>NZ_CP046722.1|WP_010671221.1|3046707_3047259_-|adenine-phosphoribosyltransferase
MTDTAQQLEFIKNSIKSIPDYPKPGILFRDVTSLLEDPKAYAASIALLVERYRNKGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPREVYSESYELEYGTDKLELHKDAIQPGDLVLVVDDLLATGGTIEATVKLIRRAGGEVKDAAFIINLFDLTGETRLNAMGVESYSLVKFPGH

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1182179 : 1264695

Enterobacteria_phage(23.68%)

plate,transposase,tRNA,integrase,head,tail,capsid

attL 1213667:1213688|attR 1241602:1241623

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_158131468.1\|1182179_1182632_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_022625112.1\|1182646_1183117_+	hypothetical protein	NA	NA	NA	NA
WP_158131469.1\|1183208_1184594_+	hypothetical protein	NA	NA	NA	NA
WP_158131470.1\|1185090_1185408_+	hypothetical protein	NA	NA	NA	NA
WP_088234235.1\|1185468_1186615_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	3.2e-149	93.7
WP_158131471.1\|1186691_1187135_+	hypothetical protein	NA	NA	NA	NA
WP_158131472.1\|1187265_1187970_+	hypothetical protein	NA	NA	NA	NA
WP_158131473.1\|1188002_1189337_+	hypothetical protein	NA	NA	NA	NA
WP_158131474.1\|1189608_1189821_+	AlpA family phage regulatory protein	A0A2H4J8C8	uncultured_Caudovirales_phage	8.7e-05	39.2
WP_158131475.1\|1189861_1190473_+	hypothetical protein	NA	NA	NA	NA
WP_158131476.1\|1190797_1192018_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_158131477.1\|1192004_1193318_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_158131478.1\|1193314_1194946_+	DNA-binding protein	NA	NA	NA	NA
WP_158131479.1\|1194946_1195372_+	hypothetical protein	NA	NA	NA	NA
WP_158131480.1\|1195445_1195847_+	hypothetical protein	NA	NA	NA	NA
WP_158131481.1\|1196010_1197024_-	DUF4263 domain-containing protein	NA	NA	NA	NA
WP_158131482.1\|1197026_1197359_-	hypothetical protein	NA	NA	NA	NA
WP_158131483.1\|1198633_1199731_-	relaxase/mobilization nuclease domain-containing protein	NA	NA	NA	NA
WP_158131484.1\|1199736_1200141_-	hypothetical protein	NA	NA	NA	NA
WP_158131485.1\|1200572_1201151_-	hypothetical protein	NA	NA	NA	NA
WP_158131486.1\|1201414_1201687_+	His-Xaa-Ser system protein HxsD	NA	NA	NA	NA
WP_158131487.1\|1201683_1203078_+	His-Xaa-Ser system radical SAM maturase HxsB	S5VT21	Leptospira_phage	8.5e-48	28.5
WP_158131488.1\|1203070_1204183_+	His-Xaa-Ser system radical SAM maturase HxsC	NA	NA	NA	NA
WP_132499757.1\|1204179_1204815_+	His-Xaa-Ser repeat protein HxsA	NA	NA	NA	NA
WP_132499756.1\|1204834_1206445_+	sporadically distributed, TIGR04141 family protein	NA	NA	NA	NA
WP_158131489.1\|1206441_1207314_-	ParB N-terminal domain-containing protein	NA	NA	NA	NA
WP_158131490.1\|1207321_1208194_-	ParB N-terminal domain-containing protein	NA	NA	NA	NA
WP_158131491.1\|1208194_1209727_-	recombinase family protein	A0A097BYD1	Leuconostoc_phage	2.7e-07	26.1
WP_158131492.1\|1210202_1210601_+	hypothetical protein	NA	NA	NA	NA
WP_158131493.1\|1210680_1211127_-	DUF943 family protein	NA	NA	NA	NA
WP_158131494.1\|1211119_1211923_-	DUF3289 family protein	NA	NA	NA	NA
WP_158131495.1\|1212183_1213434_-\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	6.4e-79	41.5
1213667:1213688	attL	NA	NA	NA	NA
WP_158131496.1\|1213881_1215051_+\|integrase	tyrosine-type recombinase/integrase	A0A2R2Z2Y0	Escherichia_phage	2.3e-195	83.3
WP_158131497.1\|1215267_1215615_-	hypothetical protein	A0A193GYX4	Enterobacter_phage	5.2e-39	67.0
WP_158131498.1\|1215614_1216370_-	DNA cytosine methyltransferase	A0A2I7QZY6	Vibrio_phage	1.4e-60	54.1
WP_158131499.1\|1216366_1216993_-	hypothetical protein	M1F3E2	Salmonella_phage	1.3e-69	61.7
WP_158131500.1\|1216989_1217718_-	DUF2786 domain-containing protein	A0A2P9JZH4	Alteromonadaceae_phage	3.2e-14	30.1
WP_158131501.1\|1217714_1218131_-	hypothetical protein	A0A248SL59	Klebsiella_phage	4.8e-15	40.7
WP_158131502.1\|1218127_1218571_-	hypothetical protein	NA	NA	NA	NA
WP_033771331.1\|1218582_1218747_-	DUF1317 family protein	NA	NA	NA	NA
WP_158131503.1\|1218733_1219270_-	HD family hydrolase	A0A192Y8M4	Salmonella_phage	1.1e-51	58.1
WP_158131504.1\|1220585_1221311_-	phage repressor protein C	K7PK07	Enterobacteria_phage	9.2e-54	67.6
WP_134160974.1\|1221423_1221654_+	helix-turn-helix domain-containing protein	A0A0M4QX15	Salmonella_phage	1.8e-16	58.6
WP_158131505.1\|1221685_1222222_+	hypothetical protein	K7PJS5	Enterobacterial_phage	2.0e-21	42.3
WP_158131506.1\|1222507_1222690_+	DUF4222 domain-containing protein	NA	NA	NA	NA
WP_158131507.1\|1222686_1223580_+	transcriptional regulator	H2DE83	Erwinia_phage	5.6e-37	62.2
WP_158131508.1\|1223592_1224027_+	PerC family transcriptional regulator	NA	NA	NA	NA
WP_158131509.1\|1225680_1226895_+\|capsid	phage major capsid protein	K7PM57	Enterobacteria_phage	5.6e-181	81.3
WP_069730023.1\|1227235_1227565_+\|head,tail	phage gp6-like head-tail connector protein	Q8SBH7	Shigella_phage	4.2e-22	51.9
WP_158131510.1\|1227566_1227956_+\|head	phage head closure protein	U5P0R0	Shigella_phage	4.3e-34	57.4
WP_158131511.1\|1227948_1228455_+	hypothetical protein	Q8HAC8	Salmonella_phage	5.8e-71	77.7
WP_158131512.1\|1228451_1229012_+	hypothetical protein	A0A192Y5U4	Salmonella_phage	1.9e-70	68.3
WP_158131513.1\|1229015_1229204_+	DUF2635 domain-containing protein	Q8SBH3	Shigella_phage	8.0e-10	55.4
WP_158131514.1\|1229203_1230700_+\|tail	phage tail protein	A0A192Y7L1	Salmonella_phage	1.4e-184	66.3
WP_010246516.1\|1230699_1231056_+	hypothetical protein	Q8W622	Enterobacteria_phage	2.0e-49	83.1
WP_010246514.1\|1231052_1231322_+\|tail	phage tail assembly protein	M1FPE4	Enterobacteria_phage	1.1e-33	77.5
WP_158131515.1\|1231463_1233347_+\|tail	phage tail tape measure protein	M1FQW0	Enterobacteria_phage	2.0e-172	75.4
WP_158131516.1\|1233359_1233854_+	hypothetical protein	NA	NA	NA	NA
WP_158131517.1\|1233897_1235274_+	DNA circularization protein	A0A192Y5U9	Salmonella_phage	2.3e-130	53.3
WP_158131518.1\|1235270_1236341_+\|plate	baseplate protein	M1FN92	Enterobacteria_phage	1.9e-140	68.8
WP_158131519.1\|1236340_1236898_+\|plate	phage baseplate assembly protein V	A0A192Y8K5	Salmonella_phage	3.9e-60	64.9
WP_158131520.1\|1236894_1237308_+	hypothetical protein	A0A192Y6D0	Salmonella_phage	6.8e-46	64.2
WP_158131521.1\|1237300_1238368_+\|plate	phage baseplate protein	Q8SBG4	Shigella_phage	3.3e-132	63.7
WP_158131522.1\|1238358_1238940_+	DUF2313 domain-containing protein	O22003	Shigella_phage	4.2e-65	62.4
WP_158131523.1\|1238942_1239605_+\|integrase	integrase	K7P7Q7	Enterobacteria_phage	5.3e-24	45.2
WP_158132150.1\|1239604_1240204_+\|tail	tail fiber assembly protein	A0A218M4J2	Erwinia_phage	3.1e-39	45.9
WP_158131524.1\|1240924_1241164_+	hypothetical protein	NA	NA	NA	NA
WP_158131525.1\|1241166_1241490_+	phage repressor protein	A0A2H4J4R6	uncultured_Caudovirales_phage	1.0e-33	63.6
WP_010671426.1\|1241927_1242863_-	formate/nitrite transporter family protein	E7DYY8	Enterobacteria_phage	1.7e-116	77.2
1241602:1241623	attR	NA	NA	NA	NA
WP_033767505.1\|1243105_1243723_+	cytochrome c biogenesis heme-transporting ATPase CcmA	A0A1V0SE00	Indivirus	2.9e-08	26.8
WP_010257910.1\|1243722_1244382_+	heme exporter protein CcmB	NA	NA	NA	NA
WP_158131526.1\|1244450_1245191_+	heme ABC transporter permease	NA	NA	NA	NA
WP_010257916.1\|1245187_1245421_+	heme exporter protein CcmD	NA	NA	NA	NA
WP_010671430.1\|1245417_1245903_+	cytochrome c maturation protein CcmE	NA	NA	NA	NA
WP_010257919.1\|1245899_1247858_+	heme lyase CcmF/NrfE family subunit	NA	NA	NA	NA
WP_158131527.1\|1247854_1248412_+	DsbE family thiol:disulfide interchange protein	NA	NA	NA	NA
WP_022625093.1\|1248408_1248861_+	cytochrome c-type biogenesis protein CcmH	NA	NA	NA	NA
WP_158131528.1\|1248860_1250069_+	c-type cytochrome biogenesis protein CcmI	NA	NA	NA	NA
WP_010257927.1\|1250219_1250984_+	phospholipid-binding lipoprotein MlaA	NA	NA	NA	NA
WP_010671434.1\|1251120_1252404_-	long-chain fatty acid transporter FadL	NA	NA	NA	NA
WP_010671435.1\|1252762_1253059_+	YfcZ/YiiS family protein	NA	NA	NA	NA
WP_022625090.1\|1253217_1254528_+	acetyl-CoA C-acyltransferase FadI	NA	NA	NA	NA
WP_158131529.1\|1254527_1256624_+	fatty acid oxidation complex subunit alpha FadJ	NA	NA	NA	NA
WP_010257941.1\|1256848_1257331_+	phosphohistidine phosphatase SixA	NA	NA	NA	NA
WP_010257944.1\|1257360_1257909_-	endonuclease SmrB	NA	NA	NA	NA
WP_158131530.1\|1258068_1259001_+	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA
WP_010257950.1\|1259046_1260132_+	chorismate synthase	A0A291AU41	Pandoravirus	4.5e-89	47.7
WP_010257953.1\|1260136_1260961_+	penicillin-insensitive murein endopeptidase	NA	NA	NA	NA
WP_010257955.1\|1260969_1261773_+	TSUP family transporter	NA	NA	NA	NA
WP_003854284.1\|1261792_1262338_+	elongation factor P hydroxylase	NA	NA	NA	NA
WP_010257960.1\|1262370_1262655_+	YfcL family protein	NA	NA	NA	NA
WP_158131531.1\|1262688_1264695_-\|tRNA	bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC	NA	NA	NA	NA

DBSCAN-SWA_2

2296564 : 2306787

Bacillus_phage(14.29%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010245666.1\|2296564_2297023_-	endopeptidase	A0A217EQL1	Bacillus_phage	5.5e-12	37.5
WP_158131744.1\|2297091_2297841_-	vitamin B12 ABC transporter ATP-binding protein BtuD	NA	NA	NA	NA
WP_010670029.1\|2297841_2298387_-	glutathione peroxidase	A0A1S7DM81	Molluscum_contagiosum_virus	3.5e-13	37.4
WP_033771623.1\|2298437_2299421_-	vitamin B12 ABC transporter permease BtuC	NA	NA	NA	NA
WP_003853259.1\|2299600_2299903_-	integration host factor subunit alpha	A0A0H3UZA0	Geobacillus_virus	7.3e-13	40.0
WP_062757528.1\|2299907_2302295_-\|tRNA	phenylalanine--tRNA ligase subunit beta	A0A1L3IZU3	BeAn_58058_virus	4.1e-10	32.0
WP_158131745.1\|2302309_2303293_-\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2H4UW22	Bodo_saltans_virus	2.9e-34	37.6
WP_106120997.1\|2303440_2303485_-	pheST operon leader peptide PheM	NA	NA	NA	NA
WP_003853267.1\|2303607_2303964_-	50S ribosomal protein L20	NA	NA	NA	NA
WP_010245683.1\|2304006_2304204_-	50S ribosomal protein L35	NA	NA	NA	NA
WP_029519030.1\|2304303_2304855_-	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	6.4e-15	32.4
WP_010245687.1\|2304858_2306787_-\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	3.7e-126	36.9

DBSCAN-SWA_3

2495031 : 2502247

Phage_21(33.33%)

integrase

attL 2487781:2487796|attR 2508477:2508492

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2487781:2487796	attL	NA	NA	NA	NA
WP_158131818.1\|2495031_2495970_-	helix-turn-helix domain-containing protein	U5P0A0	Shigella_phage	1.2e-85	60.4
WP_158131819.1\|2495959_2496157_-	DUF4222 domain-containing protein	NA	NA	NA	NA
WP_158131820.1\|2496406_2496895_-	DNA-binding protein	A0A1C9II13	Salmonella_phage	1.9e-63	69.8
WP_158131821.1\|2496887_2497112_-	hypothetical protein	NA	NA	NA	NA
WP_158131822.1\|2497165_2497846_+	helix-turn-helix domain-containing protein	K7PM82	Enterobacteria_phage	2.8e-20	33.3
WP_158131823.1\|2498328_2498766_+	hypothetical protein	NA	NA	NA	NA
WP_158131824.1\|2498765_2499491_+	DUF2786 domain-containing protein	A0A1W6DYA0	Aeromonas_phage	4.9e-07	28.6
WP_158131825.1\|2499516_2499768_+	excisionase	NA	NA	NA	NA
WP_158131826.1\|2499742_2500876_+\|integrase	tyrosine-type recombinase/integrase	Q77Z04	Phage_21	3.8e-155	73.7
WP_158131827.1\|2500996_2502247_-	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	2.2e-18	85.2
2508477:2508492	attR	NA	NA	NA	NA

DBSCAN-SWA_4

3101601 : 3109327

uncultured_Mediterranean_phage(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010255369.1\|3101601_3102072_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	1.2e-30	48.7
WP_158131957.1\|3102162_3103263_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A1V0SE20	Indivirus	6.7e-48	34.3
WP_009091750.1\|3103266_3103716_-	transcriptional regulator NrdR	NA	NA	NA	NA
WP_010255362.1\|3103904_3104342_+	peptidoglycan-binding protein LysM	G3MBQ1	Bacillus_virus	7.3e-06	50.0
WP_158131958.1\|3104358_3104928_+	DUF3251 domain-containing protein	NA	NA	NA	NA
WP_010255357.1\|3104994_3105963_-	protein translocase subunit SecF	A0A1B1IVP7	uncultured_Mediterranean_phage	3.6e-45	39.9
WP_010255355.1\|3105973_3107821_-	protein translocase subunit SecD	NA	NA	NA	NA
WP_010255353.1\|3107846_3108179_-	preprotein translocase subunit YajC	A0A1B1IVR5	uncultured_Mediterranean_phage	5.7e-11	36.3
WP_010255351.1\|3108178_3109327_-\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	1.9e-90	46.4

DBSCAN-SWA_5

3179556 : 3188927

Streptococcus_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003854408.1\|3179556_3179769_-	cold-shock protein	A0A1W6JNX5	Morganella_phage	9.3e-23	71.4
WP_010671164.1\|3180150_3181905_-	phage-like EPS depolymerase	A0A1S6L3G8	Erwinia_phage	5.0e-154	46.0
WP_010255207.1\|3182108_3182402_-	hypothetical protein	NA	NA	NA	NA
WP_010255205.1\|3182398_3182746_-	hypothetical protein	A0A286N2Q7	Klebsiella_phage	4.1e-20	45.6
WP_010255203.1\|3182742_3183210_-	glycoside hydrolase family protein	H9C148	Vibrio_phage	6.8e-26	44.0
WP_071785064.1\|3183414_3183693_-	hypothetical protein	NA	NA	NA	NA
WP_010255201.1\|3184116_3184848_-	chromophore lyase	A0A2I6PIE7	Escherichia_phage	1.1e-46	37.1
WP_033756712.1\|3185208_3186462_-	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	5.1e-92	44.6
WP_010255198.1\|3186472_3187576_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	1.7e-59	42.4
WP_010255197.1\|3187814_3188927_+	porin OmpC	Q1MVN1	Enterobacteria_phage	3.3e-111	56.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP046722

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection