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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP046457 Candidatus Syntrophocurvum alkaliphilum isolate B(2M) chromosome, complete genome 6 crisprs cas3,DinG,csa3,WYL,DEDDh,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,csx15,csx1,csm3gr7,csm2gr11,csx10gr5,cas10,cas4,cas7b,cas8b1,cas6 0 24 5 0

Results visualization

1. NZ_CP046457
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP046457_1 932515-934885 TypeI-E I-C,I-E,II-B
38 spacers
DEDDh,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP046457_2 1200384-1200743 TypeIII NA
5 spacers
csx15,csx1,csm3gr7,csm2gr11,csx10gr5

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP046457_3 1203680-1204038 NA
5 spacers
csx15,csx1,csm3gr7,csm2gr11,csx10gr5,cas10

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP046457_4 1216705-1217788 TypeIII NA
16 spacers
cas10,csm3gr7,csx10gr5,csm2gr11,cas1,cas4,cas3,cas5,cas7b,cas8b1,cas6,WYL,csx1

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP046457_5 1226946-1227245 TypeIII NA
4 spacers
cas6,cas8b1,cas7b,cas5,cas3,cas4,cas1,cas10,WYL,csx1

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP046457_6 1228919-1229479 TypeIII NA
8 spacers
WYL,cas6,cas8b1,cas7b,cas5,cas3,cas4,cas1,csx1

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP046457_1 1.33|934498|33|NZ_CP046457|CRISPRCasFinder 934498-934530 33 NZ_CP017575 Bacillus thuringiensis strain SCG04-02 plasmid PSCG11, complete sequence 460-492 5 0.848
NZ_CP046457_1 1.33|934498|33|NZ_CP046457|CRISPRCasFinder 934498-934530 33 NC_017202 Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT127, complete sequence 12433-12465 5 0.848
NZ_CP046457_1 1.33|934498|33|NZ_CP046457|CRISPRCasFinder 934498-934530 33 NC_018880 Bacillus thuringiensis Bt407 plasmid BTB_15p, complete sequence 2955-2987 5 0.848
NZ_CP046457_1 1.33|934498|33|NZ_CP046457|CRISPRCasFinder 934498-934530 33 NC_020379 Bacillus thuringiensis serovar thuringiensis str. IS5056 plasmid pIS56-15, complete sequence 8138-8170 5 0.848
NZ_CP046457_1 1.33|934498|33|NZ_CP046457|CRISPRCasFinder 934498-934530 33 NC_018489 Bacillus thuringiensis HD-771 plasmid p06, complete sequence 9734-9766 5 0.848
NZ_CP046457_1 1.33|934498|33|NZ_CP046457|CRISPRCasFinder 934498-934530 33 NZ_CP041081 Bacillus tropicus strain LM1212-W3 plasmid p8, complete sequence 3074-3106 5 0.848
NZ_CP046457_1 1.33|934498|33|NZ_CP046457|CRISPRCasFinder 934498-934530 33 NZ_CP016792 Bacillus flexus strain KLBMP 4941 plasmid unnamed2, complete sequence 12253-12285 6 0.818
NZ_CP046457_1 1.33|934498|33|NZ_CP046457|CRISPRCasFinder 934498-934530 33 NZ_CP016792 Bacillus flexus strain KLBMP 4941 plasmid unnamed2, complete sequence 24586-24618 6 0.818
NZ_CP046457_1 1.6|932848|33|NZ_CP046457|CRISPRCasFinder,CRT 932848-932880 33 NZ_CP011590 Enterobacter asburiae strain CAV1043 plasmid pCAV1043-97, complete sequence 89239-89271 7 0.788
NZ_CP046457_1 1.13|933277|33|NZ_CP046457|CRISPRCasFinder,CRT 933277-933309 33 NZ_CP014149 Paeniclostridium sordellii strain AM370 plasmid pRSJ16_1, complete sequence 12800-12832 7 0.788
NZ_CP046457_1 1.46|932850|33|NZ_CP046457|PILER-CR 932850-932882 33 NZ_CP011590 Enterobacter asburiae strain CAV1043 plasmid pCAV1043-97, complete sequence 89239-89271 7 0.788
NZ_CP046457_1 1.53|933279|33|NZ_CP046457|PILER-CR 933279-933311 33 NZ_CP014149 Paeniclostridium sordellii strain AM370 plasmid pRSJ16_1, complete sequence 12800-12832 7 0.788
NZ_CP046457_4 4.8|1217196|36|NZ_CP046457|CRISPRCasFinder,CRT,PILER-CR 1217196-1217231 36 NZ_CP050813 Yokenella regensburgei strain W13 plasmid pYRW13-131, complete sequence 8328-8363 7 0.806
NZ_CP046457_1 1.9|933031|33|NZ_CP046457|CRISPRCasFinder,CRT 933031-933063 33 NC_011247 Borrelia duttonii Ly plasmid pl165, complete sequence 8042-8074 8 0.758
NZ_CP046457_1 1.16|933460|33|NZ_CP046457|CRISPRCasFinder,CRT 933460-933492 33 MN693605 Marine virus AFVG_25M414, complete genome 17338-17370 8 0.758
NZ_CP046457_1 1.22|933827|33|NZ_CP046457|CRISPRCasFinder,CRT 933827-933859 33 NZ_CP017076 Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence 1409017-1409049 8 0.758
NZ_CP046457_1 1.33|934498|33|NZ_CP046457|CRISPRCasFinder 934498-934530 33 MN013089 Bacillus phage vB_BspM_MarvelLand, complete genome 2325-2357 8 0.758
NZ_CP046457_1 1.49|933033|33|NZ_CP046457|PILER-CR 933033-933065 33 NC_011247 Borrelia duttonii Ly plasmid pl165, complete sequence 8042-8074 8 0.758
NZ_CP046457_1 1.56|933462|33|NZ_CP046457|PILER-CR 933462-933494 33 MN693605 Marine virus AFVG_25M414, complete genome 17338-17370 8 0.758
NZ_CP046457_1 1.62|933829|33|NZ_CP046457|PILER-CR 933829-933861 33 NZ_CP017076 Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence 1409017-1409049 8 0.758
NZ_CP046457_1 1.4|932726|33|NZ_CP046457|CRISPRCasFinder,CRT 932726-932758 33 DQ222855 Bacillus anthracis phage Gamma isolate 53, complete genome 26417-26449 9 0.727
NZ_CP046457_1 1.4|932726|33|NZ_CP046457|CRISPRCasFinder,CRT 932726-932758 33 DQ289555 Bacillus anthracis phage W Beta, complete genome 29217-29249 9 0.727
NZ_CP046457_1 1.4|932726|33|NZ_CP046457|CRISPRCasFinder,CRT 932726-932758 33 NC_007814 Bacillus phage Fah, complete genome 29051-29083 9 0.727
NZ_CP046457_1 1.4|932726|33|NZ_CP046457|CRISPRCasFinder,CRT 932726-932758 33 DQ150593 Bacillus anthracis bacteriophage Fah, complete sequence 29051-29083 9 0.727
NZ_CP046457_1 1.4|932726|33|NZ_CP046457|CRISPRCasFinder,CRT 932726-932758 33 DQ222853 Bacillus anthracis phage Gamma isolate 51, complete genome 27056-27088 9 0.727
NZ_CP046457_1 1.4|932726|33|NZ_CP046457|CRISPRCasFinder,CRT 932726-932758 33 DQ221100 Bacteriophage gamma putative terminase small subunit, putative terminase large subunit, putative portal protein, putative prohead protease, putative phage structural protein, putative DNA packaging protein, putative head-tail adaptor, phage related proteins, putative major tail protein, phage related protein, putative tail tape measure protein, phage related protein, putative minor structural protein, putative holin, N-acetylmuramoyl-L-alanine amidase (PlyG), putative lipoprotein, putative transcriptional regulator, conserved hypothetical proteins, FtsK/SpoIIIE family protein, phage related protein, conserved hypothetical protein, putative transcriptional regulator, putative site-specific recombinase, conserved hypothetical protein, putative transcriptional regulators, putative antirepressor, conserved hypothetical protein, putative DNA replication proteins, conserved hypothetical protein, phage related proteins, conserved hypothetical protein, putative transglycosylase, and putative endonuclease genes, complete cds 29063-29095 9 0.727
NZ_CP046457_1 1.4|932726|33|NZ_CP046457|CRISPRCasFinder,CRT 932726-932758 33 DQ222851 Bacillus anthracis phage Cherry, complete genome 26418-26450 9 0.727
NZ_CP046457_1 1.4|932726|33|NZ_CP046457|CRISPRCasFinder,CRT 932726-932758 33 DQ289556 Bacillus anthracis phage Gamma isolate d'Herelle, complete genome 27185-27217 9 0.727
NZ_CP046457_1 1.4|932726|33|NZ_CP046457|CRISPRCasFinder,CRT 932726-932758 33 NC_007734 Bacillus phage WBeta, complete genome 29217-29249 9 0.727
NZ_CP046457_1 1.4|932726|33|NZ_CP046457|CRISPRCasFinder,CRT 932726-932758 33 KY963369 Bacillus phage Tavor_SA, complete genome 30568-30600 9 0.727
NZ_CP046457_1 1.4|932726|33|NZ_CP046457|CRISPRCasFinder,CRT 932726-932758 33 NC_007458 Bacillus phage Gamma, complete genome 27056-27088 9 0.727
NZ_CP046457_1 1.6|932848|33|NZ_CP046457|CRISPRCasFinder,CRT 932848-932880 33 JN638751 Bacillus phage G, complete genome 247427-247459 9 0.727
NZ_CP046457_1 1.11|933153|35|NZ_CP046457|CRISPRCasFinder,CRT 933153-933187 35 MK449011 Streptococcus phage Javan92, complete genome 5140-5174 9 0.743
NZ_CP046457_1 1.11|933153|35|NZ_CP046457|CRISPRCasFinder,CRT 933153-933187 35 MK448835 Streptococcus phage Javan93, complete genome 5140-5174 9 0.743
NZ_CP046457_1 1.14|933338|33|NZ_CP046457|CRISPRCasFinder,CRT 933338-933370 33 NZ_CP054197 Glaesserella parasuis strain YHP170504 plasmid unnamed1, complete sequence 4045-4077 9 0.727
NZ_CP046457_1 1.26|934071|33|NZ_CP046457|CRISPRCasFinder,CRT 934071-934103 33 MN693106 Marine virus AFVG_25M218, complete genome 26196-26228 9 0.727
NZ_CP046457_1 1.26|934071|33|NZ_CP046457|CRISPRCasFinder,CRT 934071-934103 33 MN693116 Marine virus AFVG_25M217, complete genome 18690-18722 9 0.727
NZ_CP046457_1 1.33|934498|33|NZ_CP046457|CRISPRCasFinder 934498-934530 33 CP011076 Brevibacillus laterosporus strain B9 plasmid unnamed2, complete sequence 300682-300714 9 0.727
NZ_CP046457_1 1.44|932728|33|NZ_CP046457|PILER-CR 932728-932760 33 DQ222855 Bacillus anthracis phage Gamma isolate 53, complete genome 26417-26449 9 0.727
NZ_CP046457_1 1.44|932728|33|NZ_CP046457|PILER-CR 932728-932760 33 DQ289555 Bacillus anthracis phage W Beta, complete genome 29217-29249 9 0.727
NZ_CP046457_1 1.44|932728|33|NZ_CP046457|PILER-CR 932728-932760 33 NC_007814 Bacillus phage Fah, complete genome 29051-29083 9 0.727
NZ_CP046457_1 1.44|932728|33|NZ_CP046457|PILER-CR 932728-932760 33 DQ150593 Bacillus anthracis bacteriophage Fah, complete sequence 29051-29083 9 0.727
NZ_CP046457_1 1.44|932728|33|NZ_CP046457|PILER-CR 932728-932760 33 DQ222853 Bacillus anthracis phage Gamma isolate 51, complete genome 27056-27088 9 0.727
NZ_CP046457_1 1.44|932728|33|NZ_CP046457|PILER-CR 932728-932760 33 DQ221100 Bacteriophage gamma putative terminase small subunit, putative terminase large subunit, putative portal protein, putative prohead protease, putative phage structural protein, putative DNA packaging protein, putative head-tail adaptor, phage related proteins, putative major tail protein, phage related protein, putative tail tape measure protein, phage related protein, putative minor structural protein, putative holin, N-acetylmuramoyl-L-alanine amidase (PlyG), putative lipoprotein, putative transcriptional regulator, conserved hypothetical proteins, FtsK/SpoIIIE family protein, phage related protein, conserved hypothetical protein, putative transcriptional regulator, putative site-specific recombinase, conserved hypothetical protein, putative transcriptional regulators, putative antirepressor, conserved hypothetical protein, putative DNA replication proteins, conserved hypothetical protein, phage related proteins, conserved hypothetical protein, putative transglycosylase, and putative endonuclease genes, complete cds 29063-29095 9 0.727
NZ_CP046457_1 1.44|932728|33|NZ_CP046457|PILER-CR 932728-932760 33 DQ222851 Bacillus anthracis phage Cherry, complete genome 26418-26450 9 0.727
NZ_CP046457_1 1.44|932728|33|NZ_CP046457|PILER-CR 932728-932760 33 DQ289556 Bacillus anthracis phage Gamma isolate d'Herelle, complete genome 27185-27217 9 0.727
NZ_CP046457_1 1.44|932728|33|NZ_CP046457|PILER-CR 932728-932760 33 NC_007734 Bacillus phage WBeta, complete genome 29217-29249 9 0.727
NZ_CP046457_1 1.44|932728|33|NZ_CP046457|PILER-CR 932728-932760 33 KY963369 Bacillus phage Tavor_SA, complete genome 30568-30600 9 0.727
NZ_CP046457_1 1.44|932728|33|NZ_CP046457|PILER-CR 932728-932760 33 NC_007458 Bacillus phage Gamma, complete genome 27056-27088 9 0.727
NZ_CP046457_1 1.46|932850|33|NZ_CP046457|PILER-CR 932850-932882 33 JN638751 Bacillus phage G, complete genome 247427-247459 9 0.727
NZ_CP046457_1 1.51|933155|35|NZ_CP046457|PILER-CR 933155-933189 35 MK449011 Streptococcus phage Javan92, complete genome 5140-5174 9 0.743
NZ_CP046457_1 1.51|933155|35|NZ_CP046457|PILER-CR 933155-933189 35 MK448835 Streptococcus phage Javan93, complete genome 5140-5174 9 0.743
NZ_CP046457_1 1.54|933340|33|NZ_CP046457|PILER-CR 933340-933372 33 NZ_CP054197 Glaesserella parasuis strain YHP170504 plasmid unnamed1, complete sequence 4045-4077 9 0.727
NZ_CP046457_1 1.66|934073|33|NZ_CP046457|PILER-CR 934073-934105 33 MN693106 Marine virus AFVG_25M218, complete genome 26196-26228 9 0.727
NZ_CP046457_1 1.66|934073|33|NZ_CP046457|PILER-CR 934073-934105 33 MN693116 Marine virus AFVG_25M217, complete genome 18690-18722 9 0.727
NZ_CP046457_1 1.6|932848|33|NZ_CP046457|CRISPRCasFinder,CRT 932848-932880 33 MN693075 Marine virus AFVG_25M503, complete genome 2557-2589 10 0.697
NZ_CP046457_1 1.7|932909|33|NZ_CP046457|CRISPRCasFinder,CRT 932909-932941 33 MN871451 UNVERIFIED: Serratia phage KpYy_2_45, complete genome 182386-182418 10 0.697
NZ_CP046457_1 1.9|933031|33|NZ_CP046457|CRISPRCasFinder,CRT 933031-933063 33 NC_013940 Deferribacter desulfuricans SSM1 megaplasmid pDF308, complete sequence 77645-77677 10 0.697
NZ_CP046457_1 1.46|932850|33|NZ_CP046457|PILER-CR 932850-932882 33 MN693075 Marine virus AFVG_25M503, complete genome 2557-2589 10 0.697
NZ_CP046457_1 1.47|932911|33|NZ_CP046457|PILER-CR 932911-932943 33 MN871451 UNVERIFIED: Serratia phage KpYy_2_45, complete genome 182386-182418 10 0.697
NZ_CP046457_1 1.49|933033|33|NZ_CP046457|PILER-CR 933033-933065 33 NC_013940 Deferribacter desulfuricans SSM1 megaplasmid pDF308, complete sequence 77645-77677 10 0.697
NZ_CP046457_2 2.2|1200481|37|NZ_CP046457|CRISPRCasFinder,CRT,PILER-CR 1200481-1200517 37 NZ_CP007209 Staphylococcus xylosus strain HKUOPL8 plasmid unnamed, complete sequence 18101-18137 10 0.73
NZ_CP046457_4 4.8|1217196|36|NZ_CP046457|CRISPRCasFinder,CRT,PILER-CR 1217196-1217231 36 NZ_CP033246 Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence 792644-792679 10 0.722
NZ_CP046457_4 4.8|1217196|36|NZ_CP046457|CRISPRCasFinder,CRT,PILER-CR 1217196-1217231 36 NZ_CP033248 Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence 792660-792695 10 0.722
NZ_CP046457_4 4.8|1217196|36|NZ_CP046457|CRISPRCasFinder,CRT,PILER-CR 1217196-1217231 36 NZ_AP019717 Clostridium butyricum strain NBRC 13949 plasmid pCBU1, complete sequence 208361-208396 10 0.722
NZ_CP046457_4 4.8|1217196|36|NZ_CP046457|CRISPRCasFinder,CRT,PILER-CR 1217196-1217231 36 NZ_CP039703 Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence 470367-470402 10 0.722
NZ_CP046457_4 4.8|1217196|36|NZ_CP046457|CRISPRCasFinder,CRT,PILER-CR 1217196-1217231 36 NZ_CP013238 Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence 591786-591821 10 0.722
NZ_CP046457_4 4.11|1217394|34|NZ_CP046457|CRISPRCasFinder,CRT,PILER-CR 1217394-1217427 34 JQ807254 Environmental Halophage eHP-35, partial genome 22360-22393 10 0.706

1. spacer 1.33|934498|33|NZ_CP046457|CRISPRCasFinder matches to NZ_CP017575 (Bacillus thuringiensis strain SCG04-02 plasmid PSCG11, complete sequence) position: , mismatch: 5, identity: 0.848

tgaggtgggaaagattccccacgcgctttgaaa	CRISPR spacer
tgaggtgggaaaggttccccacgcgcttatcta	Protospacer
*************.**************    *

2. spacer 1.33|934498|33|NZ_CP046457|CRISPRCasFinder matches to NC_017202 (Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT127, complete sequence) position: , mismatch: 5, identity: 0.848

tgaggtgggaaagattccccacgcgctttgaaa	CRISPR spacer
tgaggtgggaaaggttccccacgcgcttatcta	Protospacer
*************.**************    *

3. spacer 1.33|934498|33|NZ_CP046457|CRISPRCasFinder matches to NC_018880 (Bacillus thuringiensis Bt407 plasmid BTB_15p, complete sequence) position: , mismatch: 5, identity: 0.848

tgaggtgggaaagattccccacgcgctttgaaa	CRISPR spacer
tgaggtgggaaaggttccccacgcgcttatcta	Protospacer
*************.**************    *

4. spacer 1.33|934498|33|NZ_CP046457|CRISPRCasFinder matches to NC_020379 (Bacillus thuringiensis serovar thuringiensis str. IS5056 plasmid pIS56-15, complete sequence) position: , mismatch: 5, identity: 0.848

tgaggtgggaaagattccccacgcgctttgaaa	CRISPR spacer
tgaggtgggaaaggttccccacgcgcttatcta	Protospacer
*************.**************    *

5. spacer 1.33|934498|33|NZ_CP046457|CRISPRCasFinder matches to NC_018489 (Bacillus thuringiensis HD-771 plasmid p06, complete sequence) position: , mismatch: 5, identity: 0.848

tgaggtgggaaagattccccacgcgctttgaaa	CRISPR spacer
tgaggtgggaaaggttccccacgcgcttatcta	Protospacer
*************.**************    *

6. spacer 1.33|934498|33|NZ_CP046457|CRISPRCasFinder matches to NZ_CP041081 (Bacillus tropicus strain LM1212-W3 plasmid p8, complete sequence) position: , mismatch: 5, identity: 0.848

tgaggtgggaaagattccccacgcgctttgaaa	CRISPR spacer
tgaggtgggaaaggttccccacgcgcttatcta	Protospacer
*************.**************    *

7. spacer 1.33|934498|33|NZ_CP046457|CRISPRCasFinder matches to NZ_CP016792 (Bacillus flexus strain KLBMP 4941 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.818

tgaggtgggaaagattccccacgcgctttgaaa	CRISPR spacer
tgaggtgggaaaggttccccacgcgctacagga	Protospacer
*************.************* ....*

8. spacer 1.33|934498|33|NZ_CP046457|CRISPRCasFinder matches to NZ_CP016792 (Bacillus flexus strain KLBMP 4941 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.818

tgaggtgggaaagattccccacgcgctttgaaa	CRISPR spacer
tgaggtgggaaaggttccccacgcgctacagga	Protospacer
*************.************* ....*

9. spacer 1.6|932848|33|NZ_CP046457|CRISPRCasFinder,CRT matches to NZ_CP011590 (Enterobacter asburiae strain CAV1043 plasmid pCAV1043-97, complete sequence) position: , mismatch: 7, identity: 0.788

tcaccgtgtataattttatttataaattcgtta	CRISPR spacer
tcaccgcgtatatttttatttatagaatttgta	Protospacer
******.***** ***********.* *.  **

10. spacer 1.13|933277|33|NZ_CP046457|CRISPRCasFinder,CRT matches to NZ_CP014149 (Paeniclostridium sordellii strain AM370 plasmid pRSJ16_1, complete sequence) position: , mismatch: 7, identity: 0.788

-----aattgataaacttcaataaattcatctaaataa	CRISPR spacer
ctaggaat-----aacttcattatattcatctaaataa	Protospacer
     ***     ******* ** **************

11. spacer 1.46|932850|33|NZ_CP046457|PILER-CR matches to NZ_CP011590 (Enterobacter asburiae strain CAV1043 plasmid pCAV1043-97, complete sequence) position: , mismatch: 7, identity: 0.788

tcaccgtgtataattttatttataaattcgtta	CRISPR spacer
tcaccgcgtatatttttatttatagaatttgta	Protospacer
******.***** ***********.* *.  **

12. spacer 1.53|933279|33|NZ_CP046457|PILER-CR matches to NZ_CP014149 (Paeniclostridium sordellii strain AM370 plasmid pRSJ16_1, complete sequence) position: , mismatch: 7, identity: 0.788

-----aattgataaacttcaataaattcatctaaataa	CRISPR spacer
ctaggaat-----aacttcattatattcatctaaataa	Protospacer
     ***     ******* ** **************

13. spacer 4.8|1217196|36|NZ_CP046457|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050813 (Yokenella regensburgei strain W13 plasmid pYRW13-131, complete sequence) position: , mismatch: 7, identity: 0.806

atgaaag-gatgattttaatgaaattaataaattggg	CRISPR spacer
-taaatgtgttgattttaatgaatttaatcaattggt	Protospacer
 *.** * * ************* ***** ****** 

14. spacer 1.9|933031|33|NZ_CP046457|CRISPRCasFinder,CRT matches to NC_011247 (Borrelia duttonii Ly plasmid pl165, complete sequence) position: , mismatch: 8, identity: 0.758

atctagtatttttgatattatctaataatatca	CRISPR spacer
aagtgataattttgatattatttaataataata	Protospacer
*  *..** ************.******** .*

15. spacer 1.16|933460|33|NZ_CP046457|CRISPRCasFinder,CRT matches to MN693605 (Marine virus AFVG_25M414, complete genome) position: , mismatch: 8, identity: 0.758

attatgaagaatatcaagttagaacaattgtta	CRISPR spacer
atgatgaaaaatatcaagttagaaaagcttatg	Protospacer
** *****.*************** *..*  *.

16. spacer 1.22|933827|33|NZ_CP046457|CRISPRCasFinder,CRT matches to NZ_CP017076 (Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence) position: , mismatch: 8, identity: 0.758

taatccgggtgcttctaccatagcaccattaaa	CRISPR spacer
tggaccgggtgctactaccacagcaccagcgaa	Protospacer
*.. ********* ******.******* ..**

17. spacer 1.33|934498|33|NZ_CP046457|CRISPRCasFinder matches to MN013089 (Bacillus phage vB_BspM_MarvelLand, complete genome) position: , mismatch: 8, identity: 0.758

tgaggtgggaaagattccccacgcgctttgaaa	CRISPR spacer
tgaggtgggaaaggttccccacacgctcatctg	Protospacer
*************.********.****.    .

18. spacer 1.49|933033|33|NZ_CP046457|PILER-CR matches to NC_011247 (Borrelia duttonii Ly plasmid pl165, complete sequence) position: , mismatch: 8, identity: 0.758

atctagtatttttgatattatctaataatatca	CRISPR spacer
aagtgataattttgatattatttaataataata	Protospacer
*  *..** ************.******** .*

19. spacer 1.56|933462|33|NZ_CP046457|PILER-CR matches to MN693605 (Marine virus AFVG_25M414, complete genome) position: , mismatch: 8, identity: 0.758

attatgaagaatatcaagttagaacaattgtta	CRISPR spacer
atgatgaaaaatatcaagttagaaaagcttatg	Protospacer
** *****.*************** *..*  *.

20. spacer 1.62|933829|33|NZ_CP046457|PILER-CR matches to NZ_CP017076 (Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence) position: , mismatch: 8, identity: 0.758

taatccgggtgcttctaccatagcaccattaaa	CRISPR spacer
tggaccgggtgctactaccacagcaccagcgaa	Protospacer
*.. ********* ******.******* ..**

21. spacer 1.4|932726|33|NZ_CP046457|CRISPRCasFinder,CRT matches to DQ222855 (Bacillus anthracis phage Gamma isolate 53, complete genome) position: , mismatch: 9, identity: 0.727

atagctattttataagccataatagcatcaata	CRISPR spacer
tttctttgtttataagccttaataacatcaatc	Protospacer
 *  .*  ********** *****.******* 

22. spacer 1.4|932726|33|NZ_CP046457|CRISPRCasFinder,CRT matches to DQ289555 (Bacillus anthracis phage W Beta, complete genome) position: , mismatch: 9, identity: 0.727

atagctattttataagccataatagcatcaata	CRISPR spacer
tttctttgtttataagccttaataacatcaatc	Protospacer
 *  .*  ********** *****.******* 

23. spacer 1.4|932726|33|NZ_CP046457|CRISPRCasFinder,CRT matches to NC_007814 (Bacillus phage Fah, complete genome) position: , mismatch: 9, identity: 0.727

atagctattttataagccataatagcatcaata	CRISPR spacer
tttctttgtttataagccttaataacatcaatc	Protospacer
 *  .*  ********** *****.******* 

24. spacer 1.4|932726|33|NZ_CP046457|CRISPRCasFinder,CRT matches to DQ150593 (Bacillus anthracis bacteriophage Fah, complete sequence) position: , mismatch: 9, identity: 0.727

atagctattttataagccataatagcatcaata	CRISPR spacer
tttctttgtttataagccttaataacatcaatc	Protospacer
 *  .*  ********** *****.******* 

25. spacer 1.4|932726|33|NZ_CP046457|CRISPRCasFinder,CRT matches to DQ222853 (Bacillus anthracis phage Gamma isolate 51, complete genome) position: , mismatch: 9, identity: 0.727

atagctattttataagccataatagcatcaata	CRISPR spacer
tttctttgtttataagccttaataacatcaatc	Protospacer
 *  .*  ********** *****.******* 

26. spacer 1.4|932726|33|NZ_CP046457|CRISPRCasFinder,CRT matches to DQ221100 (Bacteriophage gamma putative terminase small subunit, putative terminase large subunit, putative portal protein, putative prohead protease, putative phage structural protein, putative DNA packaging protein, putative head-tail adaptor, phage related proteins, putative major tail protein, phage related protein, putative tail tape measure protein, phage related protein, putative minor structural protein, putative holin, N-acetylmuramoyl-L-alanine amidase (PlyG), putative lipoprotein, putative transcriptional regulator, conserved hypothetical proteins, FtsK/SpoIIIE family protein, phage related protein, conserved hypothetical protein, putative transcriptional regulator, putative site-specific recombinase, conserved hypothetical protein, putative transcriptional regulators, putative antirepressor, conserved hypothetical protein, putative DNA replication proteins, conserved hypothetical protein, phage related proteins, conserved hypothetical protein, putative transglycosylase, and putative endonuclease genes, complete cds) position: , mismatch: 9, identity: 0.727

atagctattttataagccataatagcatcaata	CRISPR spacer
tttctttgtttataagccttaataacatcaatc	Protospacer
 *  .*  ********** *****.******* 

27. spacer 1.4|932726|33|NZ_CP046457|CRISPRCasFinder,CRT matches to DQ222851 (Bacillus anthracis phage Cherry, complete genome) position: , mismatch: 9, identity: 0.727

atagctattttataagccataatagcatcaata	CRISPR spacer
tttctttgtttataagccttaataacatcaatc	Protospacer
 *  .*  ********** *****.******* 

28. spacer 1.4|932726|33|NZ_CP046457|CRISPRCasFinder,CRT matches to DQ289556 (Bacillus anthracis phage Gamma isolate d'Herelle, complete genome) position: , mismatch: 9, identity: 0.727

atagctattttataagccataatagcatcaata	CRISPR spacer
tttctttgtttataagccttaataacatcaatc	Protospacer
 *  .*  ********** *****.******* 

29. spacer 1.4|932726|33|NZ_CP046457|CRISPRCasFinder,CRT matches to NC_007734 (Bacillus phage WBeta, complete genome) position: , mismatch: 9, identity: 0.727

atagctattttataagccataatagcatcaata	CRISPR spacer
tttctttgtttataagccttaataacatcaatc	Protospacer
 *  .*  ********** *****.******* 

30. spacer 1.4|932726|33|NZ_CP046457|CRISPRCasFinder,CRT matches to KY963369 (Bacillus phage Tavor_SA, complete genome) position: , mismatch: 9, identity: 0.727

atagctattttataagccataatagcatcaata	CRISPR spacer
tttttttgtttataagccttaataacatcaatc	Protospacer
 *  .*  ********** *****.******* 

31. spacer 1.4|932726|33|NZ_CP046457|CRISPRCasFinder,CRT matches to NC_007458 (Bacillus phage Gamma, complete genome) position: , mismatch: 9, identity: 0.727

atagctattttataagccataatagcatcaata	CRISPR spacer
tttctttgtttataagccttaataacatcaatc	Protospacer
 *  .*  ********** *****.******* 

32. spacer 1.6|932848|33|NZ_CP046457|CRISPRCasFinder,CRT matches to JN638751 (Bacillus phage G, complete genome) position: , mismatch: 9, identity: 0.727

tcaccgtgtataattttatttataaattcgtta	CRISPR spacer
ataggtcttataattttatttttaaattcgttt	Protospacer
 .*   . ************* ********** 

33. spacer 1.11|933153|35|NZ_CP046457|CRISPRCasFinder,CRT matches to MK449011 (Streptococcus phage Javan92, complete genome) position: , mismatch: 9, identity: 0.743

attttagaatttttgatgattctgttatatagata	CRISPR spacer
tctttagagtttttgatggttctgttatagaagcg	Protospacer
 .******.*********.********** *....

34. spacer 1.11|933153|35|NZ_CP046457|CRISPRCasFinder,CRT matches to MK448835 (Streptococcus phage Javan93, complete genome) position: , mismatch: 9, identity: 0.743

attttagaatttttgatgattctgttatatagata	CRISPR spacer
tctttagagtttttgatggttctgttatagaagcg	Protospacer
 .******.*********.********** *....

35. spacer 1.14|933338|33|NZ_CP046457|CRISPRCasFinder,CRT matches to NZ_CP054197 (Glaesserella parasuis strain YHP170504 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.727

atataagtatcagtagttggatttacccaatta	CRISPR spacer
cagcacacatcagtaattggattaacccaatta	Protospacer
  ..* ..*******.******* *********

36. spacer 1.26|934071|33|NZ_CP046457|CRISPRCasFinder,CRT matches to MN693106 (Marine virus AFVG_25M218, complete genome) position: , mismatch: 9, identity: 0.727

ctttaatcttctttgcattggtcattttgttaa	CRISPR spacer
taggcatcttctttgctttagtcattttgtcta	Protospacer
.    *********** **.**********. *

37. spacer 1.26|934071|33|NZ_CP046457|CRISPRCasFinder,CRT matches to MN693116 (Marine virus AFVG_25M217, complete genome) position: , mismatch: 9, identity: 0.727

ctttaatcttctttgcattggtcattttgttaa	CRISPR spacer
taggcatcttctttgctttagtcattttgtcta	Protospacer
.    *********** **.**********. *

38. spacer 1.33|934498|33|NZ_CP046457|CRISPRCasFinder matches to CP011076 (Brevibacillus laterosporus strain B9 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.727

tgaggtgggaaagattccccacgcgctttgaaa	CRISPR spacer
tgaggtgggaaaggttcctcacgcgacctctgg	Protospacer
*************.****.****** ..*  ..

39. spacer 1.44|932728|33|NZ_CP046457|PILER-CR matches to DQ222855 (Bacillus anthracis phage Gamma isolate 53, complete genome) position: , mismatch: 9, identity: 0.727

atagctattttataagccataatagcatcaata	CRISPR spacer
tttctttgtttataagccttaataacatcaatc	Protospacer
 *  .*  ********** *****.******* 

40. spacer 1.44|932728|33|NZ_CP046457|PILER-CR matches to DQ289555 (Bacillus anthracis phage W Beta, complete genome) position: , mismatch: 9, identity: 0.727

atagctattttataagccataatagcatcaata	CRISPR spacer
tttctttgtttataagccttaataacatcaatc	Protospacer
 *  .*  ********** *****.******* 

41. spacer 1.44|932728|33|NZ_CP046457|PILER-CR matches to NC_007814 (Bacillus phage Fah, complete genome) position: , mismatch: 9, identity: 0.727

atagctattttataagccataatagcatcaata	CRISPR spacer
tttctttgtttataagccttaataacatcaatc	Protospacer
 *  .*  ********** *****.******* 

42. spacer 1.44|932728|33|NZ_CP046457|PILER-CR matches to DQ150593 (Bacillus anthracis bacteriophage Fah, complete sequence) position: , mismatch: 9, identity: 0.727

atagctattttataagccataatagcatcaata	CRISPR spacer
tttctttgtttataagccttaataacatcaatc	Protospacer
 *  .*  ********** *****.******* 

43. spacer 1.44|932728|33|NZ_CP046457|PILER-CR matches to DQ222853 (Bacillus anthracis phage Gamma isolate 51, complete genome) position: , mismatch: 9, identity: 0.727

atagctattttataagccataatagcatcaata	CRISPR spacer
tttctttgtttataagccttaataacatcaatc	Protospacer
 *  .*  ********** *****.******* 

44. spacer 1.44|932728|33|NZ_CP046457|PILER-CR matches to DQ221100 (Bacteriophage gamma putative terminase small subunit, putative terminase large subunit, putative portal protein, putative prohead protease, putative phage structural protein, putative DNA packaging protein, putative head-tail adaptor, phage related proteins, putative major tail protein, phage related protein, putative tail tape measure protein, phage related protein, putative minor structural protein, putative holin, N-acetylmuramoyl-L-alanine amidase (PlyG), putative lipoprotein, putative transcriptional regulator, conserved hypothetical proteins, FtsK/SpoIIIE family protein, phage related protein, conserved hypothetical protein, putative transcriptional regulator, putative site-specific recombinase, conserved hypothetical protein, putative transcriptional regulators, putative antirepressor, conserved hypothetical protein, putative DNA replication proteins, conserved hypothetical protein, phage related proteins, conserved hypothetical protein, putative transglycosylase, and putative endonuclease genes, complete cds) position: , mismatch: 9, identity: 0.727

atagctattttataagccataatagcatcaata	CRISPR spacer
tttctttgtttataagccttaataacatcaatc	Protospacer
 *  .*  ********** *****.******* 

45. spacer 1.44|932728|33|NZ_CP046457|PILER-CR matches to DQ222851 (Bacillus anthracis phage Cherry, complete genome) position: , mismatch: 9, identity: 0.727

atagctattttataagccataatagcatcaata	CRISPR spacer
tttctttgtttataagccttaataacatcaatc	Protospacer
 *  .*  ********** *****.******* 

46. spacer 1.44|932728|33|NZ_CP046457|PILER-CR matches to DQ289556 (Bacillus anthracis phage Gamma isolate d'Herelle, complete genome) position: , mismatch: 9, identity: 0.727

atagctattttataagccataatagcatcaata	CRISPR spacer
tttctttgtttataagccttaataacatcaatc	Protospacer
 *  .*  ********** *****.******* 

47. spacer 1.44|932728|33|NZ_CP046457|PILER-CR matches to NC_007734 (Bacillus phage WBeta, complete genome) position: , mismatch: 9, identity: 0.727

atagctattttataagccataatagcatcaata	CRISPR spacer
tttctttgtttataagccttaataacatcaatc	Protospacer
 *  .*  ********** *****.******* 

48. spacer 1.44|932728|33|NZ_CP046457|PILER-CR matches to KY963369 (Bacillus phage Tavor_SA, complete genome) position: , mismatch: 9, identity: 0.727

atagctattttataagccataatagcatcaata	CRISPR spacer
tttttttgtttataagccttaataacatcaatc	Protospacer
 *  .*  ********** *****.******* 

49. spacer 1.44|932728|33|NZ_CP046457|PILER-CR matches to NC_007458 (Bacillus phage Gamma, complete genome) position: , mismatch: 9, identity: 0.727

atagctattttataagccataatagcatcaata	CRISPR spacer
tttctttgtttataagccttaataacatcaatc	Protospacer
 *  .*  ********** *****.******* 

50. spacer 1.46|932850|33|NZ_CP046457|PILER-CR matches to JN638751 (Bacillus phage G, complete genome) position: , mismatch: 9, identity: 0.727

tcaccgtgtataattttatttataaattcgtta	CRISPR spacer
ataggtcttataattttatttttaaattcgttt	Protospacer
 .*   . ************* ********** 

51. spacer 1.51|933155|35|NZ_CP046457|PILER-CR matches to MK449011 (Streptococcus phage Javan92, complete genome) position: , mismatch: 9, identity: 0.743

attttagaatttttgatgattctgttatatagata	CRISPR spacer
tctttagagtttttgatggttctgttatagaagcg	Protospacer
 .******.*********.********** *....

52. spacer 1.51|933155|35|NZ_CP046457|PILER-CR matches to MK448835 (Streptococcus phage Javan93, complete genome) position: , mismatch: 9, identity: 0.743

attttagaatttttgatgattctgttatatagata	CRISPR spacer
tctttagagtttttgatggttctgttatagaagcg	Protospacer
 .******.*********.********** *....

53. spacer 1.54|933340|33|NZ_CP046457|PILER-CR matches to NZ_CP054197 (Glaesserella parasuis strain YHP170504 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.727

atataagtatcagtagttggatttacccaatta	CRISPR spacer
cagcacacatcagtaattggattaacccaatta	Protospacer
  ..* ..*******.******* *********

54. spacer 1.66|934073|33|NZ_CP046457|PILER-CR matches to MN693106 (Marine virus AFVG_25M218, complete genome) position: , mismatch: 9, identity: 0.727

ctttaatcttctttgcattggtcattttgttaa	CRISPR spacer
taggcatcttctttgctttagtcattttgtcta	Protospacer
.    *********** **.**********. *

55. spacer 1.66|934073|33|NZ_CP046457|PILER-CR matches to MN693116 (Marine virus AFVG_25M217, complete genome) position: , mismatch: 9, identity: 0.727

ctttaatcttctttgcattggtcattttgttaa	CRISPR spacer
taggcatcttctttgctttagtcattttgtcta	Protospacer
.    *********** **.**********. *

56. spacer 1.6|932848|33|NZ_CP046457|CRISPRCasFinder,CRT matches to MN693075 (Marine virus AFVG_25M503, complete genome) position: , mismatch: 10, identity: 0.697

tcaccgtgtataattttatttataaattcgtta	CRISPR spacer
ttttatcccataattttttttataaattagtta	Protospacer
*. .  . .******** ********** ****

57. spacer 1.7|932909|33|NZ_CP046457|CRISPRCasFinder,CRT matches to MN871451 (UNVERIFIED: Serratia phage KpYy_2_45, complete genome) position: , mismatch: 10, identity: 0.697

gggcattcatctccggtatatggtttgagttca	CRISPR spacer
aaatagagatcttcggtatatggtttgacttcg	Protospacer
....*   ****.*************** ***.

58. spacer 1.9|933031|33|NZ_CP046457|CRISPRCasFinder,CRT matches to NC_013940 (Deferribacter desulfuricans SSM1 megaplasmid pDF308, complete sequence) position: , mismatch: 10, identity: 0.697

atctagtatttttgatattatctaataatatca	CRISPR spacer
tataattatttttgttattttctaataatactt	Protospacer
  . * ******** **** **********.. 

59. spacer 1.46|932850|33|NZ_CP046457|PILER-CR matches to MN693075 (Marine virus AFVG_25M503, complete genome) position: , mismatch: 10, identity: 0.697

tcaccgtgtataattttatttataaattcgtta	CRISPR spacer
ttttatcccataattttttttataaattagtta	Protospacer
*. .  . .******** ********** ****

60. spacer 1.47|932911|33|NZ_CP046457|PILER-CR matches to MN871451 (UNVERIFIED: Serratia phage KpYy_2_45, complete genome) position: , mismatch: 10, identity: 0.697

gggcattcatctccggtatatggtttgagttca	CRISPR spacer
aaatagagatcttcggtatatggtttgacttcg	Protospacer
....*   ****.*************** ***.

61. spacer 1.49|933033|33|NZ_CP046457|PILER-CR matches to NC_013940 (Deferribacter desulfuricans SSM1 megaplasmid pDF308, complete sequence) position: , mismatch: 10, identity: 0.697

atctagtatttttgatattatctaataatatca	CRISPR spacer
tataattatttttgttattttctaataatactt	Protospacer
  . * ******** **** **********.. 

62. spacer 2.2|1200481|37|NZ_CP046457|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP007209 (Staphylococcus xylosus strain HKUOPL8 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.73

tattccacggttcattgaatttaagtattttattttt	CRISPR spacer
gacaatgcttttcatggaatttaagcattttattttt	Protospacer
 *.  ..*  ***** *********.***********

63. spacer 4.8|1217196|36|NZ_CP046457|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033246 (Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence) position: , mismatch: 10, identity: 0.722

atgaaaggatgattttaatgaaattaataaattggg	CRISPR spacer
taagttgtatgattttaatgaaagtaatatattggt	Protospacer
  ..  * *************** ***** ***** 

64. spacer 4.8|1217196|36|NZ_CP046457|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033248 (Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence) position: , mismatch: 10, identity: 0.722

atgaaaggatgattttaatgaaattaataaattggg	CRISPR spacer
taagttgtatgattttaatgaaagtaatatattggt	Protospacer
  ..  * *************** ***** ***** 

65. spacer 4.8|1217196|36|NZ_CP046457|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP019717 (Clostridium butyricum strain NBRC 13949 plasmid pCBU1, complete sequence) position: , mismatch: 10, identity: 0.722

atgaaaggatgattttaatgaaattaataaattggg	CRISPR spacer
taagttgtatgattttaatgaaagtaatatattggt	Protospacer
  ..  * *************** ***** ***** 

66. spacer 4.8|1217196|36|NZ_CP046457|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039703 (Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence) position: , mismatch: 10, identity: 0.722

atgaaaggatgattttaatgaaattaataaattggg	CRISPR spacer
taagttgtatgattttaatgaaagtaatatattggt	Protospacer
  ..  * *************** ***** ***** 

67. spacer 4.8|1217196|36|NZ_CP046457|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 10, identity: 0.722

atgaaaggatgattttaatgaaattaataaattggg	CRISPR spacer
taagttgtatgattttaatgaaagtaatatattggt	Protospacer
  ..  * *************** ***** ***** 

68. spacer 4.11|1217394|34|NZ_CP046457|CRISPRCasFinder,CRT,PILER-CR matches to JQ807254 (Environmental Halophage eHP-35, partial genome) position: , mismatch: 10, identity: 0.706

ctggcgcgcaatttgaaatagtaaagagcactga	CRISPR spacer
ccgaaagagaatttgaagtagtaaaaagcactgg	Protospacer
*.*. . . ********.*******.*******.

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 208814 : 215402 6 Prochlorococcus_phage(33.33%) NA NA
DBSCAN-SWA_2 557309 : 565798 9 uncultured_Caudovirales_phage(16.67%) NA NA
DBSCAN-SWA_3 894350 : 971287 75 Streptococcus_phage(30.3%) protease,holin,capsid,terminase,transposase,head,portal,tail NA
DBSCAN-SWA_4 1004552 : 1013327 8 Staphylococcus_phage(66.67%) NA NA
DBSCAN-SWA_5 1596969 : 1608626 7 Moumouvirus(50.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage