CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP046456	Corynebacterium sp. 2039 plasmid pCOCCU, complete sequence	1 crisprs	NA	0	1	0	0
NZ_CP046455	Corynebacterium sp. 2039 chromosome, complete genome	2 crisprs	cas3,csa3,DEDDh,WYL,DinG	0	2	0	0

1. NZ_CP046455

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP046455_1

• CRISPR_ID: NZ_CP046455_1
• CRISPR_location: 2653703-2653839
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 2 spacers

Consensus repeat of NZ_CP046455_1

Consensus_repeat	Method
GGCCCACCGGAACCGAAACCACCACC	CRISPRCasFinder

spacers of NZ_CP046455_1

>1.1|2653729|16|NZ_CP046455|CRISPRCasFinder
CGGGTTAGGGCCACCC
>1.2|2653771|43|NZ_CP046455|CRISPRCasFinder
CGGCCCACCAGAGCCGAAGCCACCACCAGGAGTAGGACCGTTT

CRISPR arrays and Neighbor proteins around NZ_CP046455_1

CRISPR arrays

The CRISPR arrays of NZ_CP046455_1

>merge|NZ_CP046455|1|2653703-2653839|CRISPRCasFinder
GTTCGCGGCGAACCGAAACCGCCACCCGGGTTAGGGCCACCCGGCCCACCGGAACCGAAACCACCACCCGGCCCACCAGAGCCGAAGCCACCACCAGGAGTAGGACCGTTTGGCCCACCGGAACCGAAGCCACCACC

>NZ_CP046455|1|1|2653703-2653839|CRISPRCasFinder
GTTCGCGGCGAACCGAAACCGCCACC	CGGGTTAGGGCCACCC
GGCCCACCGGAACCGAAACCACCACC	CGGCCCACCAGAGCCGAAGCCACCACCAGGAGTAGGACCGTTT
GGCCCACCGGAACCGAAGCCACCACC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046455.1|WP_156232847.1|2659514_2660144_-|hypothetical-protein	unknown	unknown	gnl|CDD|223475
NZ_CP046455.1|WP_156232843.1|2656373_2656610_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP046455.1|WP_156231837.1|2640307_2641654_-|hypothetical-protein	unknown	unknown	gnl|CDD|370723
NZ_CP046455.1|WP_156231847.1|2650016_2653619_-|hypothetical-protein	unknown	unknown	gnl|CDD|372732
NZ_CP046455.1|WP_156232849.1|2664188_2665916_+|Na+/H+-antiporter-subunit-D	unknown	unknown	gnl|CDD|237165
NZ_CP046455.1|WP_156231857.1|2665912_2666422_+|Na+/H+-antiporter-subunit-E	unknown	unknown	gnl|CDD|181598
NZ_CP046455.1|WP_156231829.1|2637095_2637221_-|PorA-family-porin	unknown	unknown	unknown
NZ_CP046455.1|WP_156231839.1|2641658_2642615_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP046455.1|WP_156231862.1|2666702_2667083_+|cation:proton-antiporter	unknown	unknown	gnl|CDD|183613
NZ_CP046455.1|WP_156231833.1|2638162_2639803_-|chaperonin-GroEL	unknown	unknown	gnl|CDD|234573
NZ_CP046455.1|WP_156231831.1|2637321_2637507_-|PorH-family-porin	unknown	unknown	unknown
NZ_CP046455.1|WP_156231859.1|2666427_2666703_+|cation:proton-antiporter	unknown	unknown	gnl|CDD|181179
NZ_CP046455.1|WP_156231855.1|2663674_2664166_+|Na(+)/H(+)-antiporter-subunit-C	unknown	unknown	gnl|CDD|236136
NZ_CP046455.1|WP_156231851.1|2657336_2658719_+|M20/M25/M40-family-metallo-hydrolase	unknown	unknown	gnl|CDD|236127
NZ_CP046455.1|WP_156231843.1|2644848_2647221_-|hypothetical-protein	unknown	unknown	gnl|CDD|235124
NZ_CP046455.1|WP_156231841.1|2642614_2644840_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP046455.1|WP_156231845.1|2647221_2650017_-|hypothetical-protein	unknown	unknown	gnl|CDD|372001
NZ_CP046455.1|WP_156232845.1|2658985_2659507_+|acetyl-CoA-acetyltransferase	unknown	unknown	unknown
NZ_CP046455.1|WP_156231853.1|2660654_2663672_+|Na+/H+-antiporter-subunit-A	unknown	unknown	gnl|CDD|237154
NZ_CP046455.1|WP_156231835.1|2640044_2640311_-|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP046455.1|WP_156232849.1|2664188_2665916_+|Na+/H+-antiporter-subunit-D	gnl|CDD|237165	PRK12665, PRK12665, putative monovalent cation/H+ antiporter subunit D; Reviewed.	0
NZ_CP046455.1|WP_156231847.1|2650016_2653619_-|hypothetical-protein	gnl|CDD|372732	pfam13809, Tubulin_2, Tubulin like. Many of the residues conserved in Tubulin, pfam00091, are also highly conserved in this family.	1.88094e-51
NZ_CP046455.1|WP_156231837.1|2640307_2641654_-|hypothetical-protein	gnl|CDD|370723	pfam09849, DUF2076, Uncharacterized protein conserved in bacteria (DUF2076). This domain, found in various hypothetical prokaryotic proteins, has no known function. The domain, however, is found in various periplasmic ligand-binding sensor proteins.	0.000552816
NZ_CP046455.1|WP_156231857.1|2665912_2666422_+|Na+/H+-antiporter-subunit-E	gnl|CDD|181598	PRK08965, PRK08965, putative monovalent cation/H+ antiporter subunit E; Reviewed.	1.79589e-42
NZ_CP046455.1|WP_156231851.1|2657336_2658719_+|M20/M25/M40-family-metallo-hydrolase	gnl|CDD|236127	PRK07907, PRK07907, hypothetical protein; Provisional.	0
NZ_CP046455.1|WP_156232847.1|2659514_2660144_-|hypothetical-protein	gnl|CDD|223475	COG0398, COG0398, Uncharacterized conserved protein [Function unknown].	1.47007e-25
NZ_CP046455.1|WP_156231859.1|2666427_2666703_+|cation:proton-antiporter	gnl|CDD|181179	PRK07948, PRK07948, putative monovalent cation/H+ antiporter subunit F; Reviewed.	1.09631e-36
NZ_CP046455.1|WP_156231862.1|2666702_2667083_+|cation:proton-antiporter	gnl|CDD|183613	PRK12592, PRK12592, putative monovalent cation/H+ antiporter subunit G; Reviewed.	1.14987e-59
NZ_CP046455.1|WP_156231843.1|2644848_2647221_-|hypothetical-protein	gnl|CDD|235124	PRK03427, PRK03427, cell division protein ZipA; Provisional.	1.3705e-06
NZ_CP046455.1|WP_156231833.1|2638162_2639803_-|chaperonin-GroEL	gnl|CDD|234573	PRK00013, groEL, chaperonin GroEL; Reviewed.	0
NZ_CP046455.1|WP_156231845.1|2647221_2650017_-|hypothetical-protein	gnl|CDD|372001	pfam12263, DUF3611, Protein of unknown function (DUF3611). This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 180 and 205 amino acids in length. There are two completely conserved residues (W and G) that may be functionally important.	0.00228788
NZ_CP046455.1|WP_156231855.1|2663674_2664166_+|Na(+)/H(+)-antiporter-subunit-C	gnl|CDD|236136	PRK07946, PRK07946, putative monovalent cation/H+ antiporter subunit C; Reviewed.	3.09971e-74
NZ_CP046455.1|WP_156231853.1|2660654_2663672_+|Na+/H+-antiporter-subunit-A	gnl|CDD|237154	PRK12644, PRK12644, putative monovalent cation/H+ antiporter subunit A; Reviewed.	0

Protein sequences

>NZ_CP046455.1|WP_156231847.1|2650016_2653619_-|hypothetical-protein
MRKIFVVGCGGSGAKTLAYMMDQLKTTLAEKLPERYPSPKDVKLPRAWQFVSVDVPTSPESAGANLPNVSEAGGRYISCGSTERYYPVDTAVSNQLGSRRELGTIASWALPNPESETTVISAGAGQYRSIGRMLILSKLQEVQQELRKSWDVLFTGETDRELADLRNQLYNETSSGADSSQSQPLVFVVSSMAGGAGASMALDICRLLTGLEGIAVGNTSLFMVTPDIFSQLSPDAVAGANPNALAMFSELLAAQLGSATESDQRIFQALGVPVGGDSVPVGRIFPVGVRSGENGALLGDGQADTVYRALGRALAALVADDGALEDYKRYTLGNRGGASADQSRFAWGTAEPKNVPWGTLGYAQLSMGRDRYAEYAAQRLARSAVERLLRGHYDKSDESPADLQIKKRLDNNRNGLDNQLHRIMPLPGQSEGWINQMFQGVVERWTQRMMGVVQDQIPNAQNKRGSEWVIDVTRALQISSSMVDNDQRQELYSGVAEWASAGILQEGLLGLLRSEIAKFGVPYGSALLLDIRHKIEDNLVAELRQLSDRRAPQAVVLDETQRAALESDRGRIDDSTKWTQEIVAKIAPQLRNRAMAMIAQHMASVLHDFVSNFITPLQRNIQMGHADLEDAMTKTSDSDLGVAQLKTNVPALWPDESQNTVPTRFSQAANEVFLTEVDSFVGQFITDITQSARTEEIHNFDYEQALNVSAQRVVSGNWESLSGSEAAPRDLIRLIEVWVARDLAYDPENSGEHRDPRPARFQFNISSAEVLERARQYIRRPGFSFQQFISSSLRDFVTAPGLSESERGARRQQVLSKFSEAMTYALPLAQINTQLVRAIYNDEVRYEFNFSQIPFGGDELGDSLKQAVRDYPNHRPADITKPLGSALVNQGEERHIDIFGSYPNYVPIVFDSLLPPIEKQWRQTAGTRSEFWNGRRARPLPAALPMTDTERLAMVKGWYIGRIIGRIYFPETLDTADTTPVQIHEEQSKQWVNFDTPLLTPVSRFRAGLDWLPSLLESVSLAWARSGEQPLFRSVQPYILLRQLWDDAPSPSLGGRTTRGRRLLHEWLYNGERMAGEVNQIAGTGVGATPAERLEITRAWLQRQHEIAQAYVPSAKLGEGRLFNTADRPFADITDRSVSAKVPVFADIAPDVTEATADIINILEACLQAGPPQAETGFVPTFDPRAAQSGAADLPGAGEF
>NZ_CP046455.1|WP_156231845.1|2647221_2650017_-|hypothetical-protein
MSTPVGLDSTLTVFLGRGRLAQGIRQTLEDFTATGLIRDLVWVDADAFVSPSSEAIHLRVNADGTPEINRRPFNSLVSQSGASRMHLGIINVIGAEDGILSAVEITALNNALSSFSVGRGIHRTNLMITAVDSPLAAPLPILNGYTNLMLAPEDSLGPESSTVAYYHDHLDPRFTLHCAAGIASLFGIWEGATSAPVSELAPNHGETFRLVRSFYRRIDGQAVQAQLKSRILDTSENPLPRIERPGQEISAQHTQNPAGFAAEAAQGLLEKFEDQLIGDRVSPTVERTRNTSAAAGFKSFLGEWFKNMISTPVRAWGDVRAESSSFATDAVQSTIYGETGSRIRVGGDSLSDAPGHTPAQRDPAQVDLNLRAAAELRPLWEAYKNTAMSLLDAAPRLVGEGEARLPSVVNDGSSSRFTVAKQAVEVIPGPEENFGAELPYALRSVLGEHRVAPYDVVGVQEYEQRLGSQTQVGQRQMGQVRSEFQQWQGRNSQSFAYHVGRGLQERIQQQHQQQANYAAQIEHYRKDKKEVAGPGRAGKIFRWLGWVTFWSAAVFALVWGVENWRAESVMELSTWVRHLNQSETSTKAWLFGIWLALWLLCWILQVYFETRDNIRLRNQRSDVASRLAVALENHSRTKHTIGRLNVAYQQFLSVSQVIGTLLERPFGKIQHTRVEAAIPVNTMPDSLLFAEATPDEQTVSQLAVGFRRKLYRQGWLQDYVDGGMKEAARSFTAENHTPIGVDHLFATTGQGSSGDLARFSQWIAGEKFRSQDRSAPKWNSITAALANDARHEGAAVLTSLQFYRDGKKTEAPNRAPLANSVASGSFHGEIASASGQVGRVLSLDPNFCTHERHANAFDAIGVSEVLVQVGHTAGQSDIAFRSQLSQSASSELLAQMPTEEHHLPPSRGTEAQPFSTQFRPNEQQMPGTGEF
>NZ_CP046455.1|WP_156231843.1|2644848_2647221_-|hypothetical-protein
MSDSTEYQILEAFDQWHKAARTIHAVESLPSGQELLAAAQDPSQLEPGTNHPALLVWASALRRARALALIGNLDPILTRSDPRLFEPDMTVVAGEVQPSPEVPQQQVYEGVVEPMPQHQQWPSPQEVHEAEVETEQDANLDQVFPPIFGTEPDIPEPEYSSYQPEPTPEPASPQHQEAQYPEPEYFSPQPEPAVKPAETWIPEPEYSSYQPEPQPAETPLEGHLSSWQPHQFRGLDFFSEVVEVPGAQLNINPTSDGSLELSWSVPDDGAAVQVYRVLSDESEFARDLQHGEDRAITLKTRWVDSDPLSKAFRVYQVWLYEGSSESAAVQSEPRLVGERYFILPIDNIDLSVAGSVITGQWAPVENTHRVAVFRAPATERRIRSPQNEIVKQERNREGFRFTPEHRGVDYKFVAERFVLIGGNEVASAPSEEFTITMPAEVVEVPIEVTPAGSGVDARFDVRWQQPHSGNVRIYRTENPPADGLQDRVVEVEQLEGFGLPDRDRANFLNQGDTASVVDWPEDWYSLFITSVSVVGNQALVGKSYSWVRCGQVSNAKLHERVSTQLLTFGWPEQAHHVTAVIAEPGVGDLSGQTPGKLDPSVTAIAGTISLENYAEQGGMRIQLNHPGKVLLYPSRTYGGEKIWGEPTTLHYNGLRKFSYKLVANGHNRLALAIYSDREIPEYRSFTLVVRNDRLPLEPDDGQPIWTRKNSEGSSNFEQVISTLNLRKKGEPEVEYWELDPDLFTRYRTGFLRLFLTDDNTPGAEVNALIDPNPEQLSLDQWMRHFNPGGW
>NZ_CP046455.1|WP_156231841.1|2642614_2644840_-|hypothetical-protein
MSPWTHVTYASFRNASGQGGWRTGPSISAAEEHHQLVAEHAPTSLIPVQTFDDFIGSKAIAELPRRFEYQPLKKGALIMQSVPAGKDATGRPGNVFTHAVIDRDLDIPLKAQYPINFFRSPDLLTPFRATEVNAVSLEPGLAEPRPGSKSDLYASWMLVKELYGDRSGALHRLQDVLQAGKEQAVLLLEDPDQAAFWLMALSSTLTPAEARRLLSFSTFERAAALPTQDFRNGLLPVLVLPAQDKHQLVGRRGIQLIDPDDPATHTPELTGSWAQLTTGLLRSGLAGDELPAELMAANESARVTYRLGDGLARLVRKHAAKLPAELVKLADQQLDQGKAAAPRAPVGDYLPHRRGDLAWVEKVIANPLLADPSRMPPNETWQAFQIGKLPPQKQQSLREQAMKNLELIYAAPILTLIYYVDFLLQTQLLVEKINGSEFRSHFNHFPAMDEWQQGRALHPGAHSQLHFQFERANREYGYSHSVQPTTRAPRGQVEQHRVIPEPPFSGVGSGPDREPAGAEKWLAKIGLRVPIGSLIMVLRAKDTPVMLQRLLDEEVIENSPEDYSDELLRVYYSVVLRAEIQRVLHEDAIKETALTNQLTELTRRAVQHRVEPLAEVGGDLAEASLKDLGRTIADQDYQDLPWNDREMAALLRLVESYTRKDYIRRSEKINLVFGLVAQAMLARLKEKTPPVQQTSSPSKNTEPRTAPSGERRRPESPATEPPPATQSRRRFRMKNKNKEKN
>NZ_CP046455.1|WP_156231839.1|2641658_2642615_-|hypothetical-protein
MAVIRLASGQSHIVPRDKFLAQLQVFLSDDSSFEVEISPTLESHRRPNSNLVALRNPQGEAEITVLPGHSGSQFISGTSLFATLSIASGAGGETRLELPAFEVGGLRASTILRVIPEGDQVYIQVGETGGDGSLDAGSAGVRSALRSSIDRDGLPQGQRRDLTLLVDVTSSMNYSTSPECFGAMFTFAAGVLSSIVADRRVQLLTSSASSTPELLQGAESIQALGQREFERREVGWGVELSQISPDEALVVISDDLPAEVLKFPGMVHLLSPRPPLLPQGITATVFDGQMIKAVTEHNDTTLRAPTRIMYDTLTRGEK
>NZ_CP046455.1|WP_156231837.1|2640307_2641654_-|hypothetical-protein
MNFPQNLSAEPGDGQLPTRCPYTFRVMEDPAAQHSPFVNPKYQAEWPLPQGWQNSSTITFAMAGARSSGKSLYIAVVVKLLKRLVVENGGTFRYADETTRMIYEEKYEKPLFEQMGLLPPTPPVASSDAHQQRPLIFALTSRQFPGKRIFVVFRDVAGEDLKEEKFVERQAELDFFRYANRVIFLYDPMAVPEIARMLEGTVPSHDVGDDDPTAVLRNVLSVLGPVDRPRISLCLSKFDTMQFLSEVEHGAFYGGGDQVNWQRVMSNYGASFRRDSAPLDQPFDKGASTLLDLEIRSLLSCLGANELLNQLNIPLMGSHTYPFRCFAVSALGAPPEGDRVSRTGIAPFHCLDPVREVFAEYGLFDGAHIPADFPSAWGSAPQQPSQVPQQAAHPGQQHYPPEDGASPQQAPQRHPGQQPQQTNPNLSQPEPQQEQPAAGKKKKKWWFK
>NZ_CP046455.1|WP_156231835.1|2640044_2640311_-|hypothetical-protein
MSYPAGNPGWDSQSPAPGGDSVSLDAVTEAEQWGSDRRAENKARRGRMMAWILSAVIAILLVALLMGYLWSTELFVATETADQVLSKM
>NZ_CP046455.1|WP_156231833.1|2638162_2639803_-|chaperonin-GroEL
MAKMIAFDEEARRGLEKGLNILADAVKVTLGPKGRNVVLEKSWGAPTITNDGVSIAREIELEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQAMVREGLRNVAAGSNPMGIKRGIEQAVVKVTEHLLSQAKEVETEEQIAATAGISAADPAIGAQIAKAMYAVGAGKANKDSVITVEESNTFGVELEVTEGMRFDKGYISGYFATDTERLEAVLEDPYILFVSSKISNIKDLLPLLEKVMQSGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAQLQDMAILTGGQVIAEEVGLSLETADLPLLGRARKVVVTKDDTTIVEGAGTPEQIEGRVNQIRAEIDNSDSDYDKEKLQERLAKLAGGVAVLKVGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALLQAAKALEGLQLTGDEATGVRIVNEALSAPLKQIAQNAGLEPGVVAAKVLELPEGQGLNAATGEYEDLMAAGINDPVKVTRSALQNAASIAALFLTTEAVVADKPQPAGSAMPGADEMGGMGGF
>NZ_CP046455.1|WP_156231831.1|2637321_2637507_-|PorH-family-porin
MDLDFAIDQLDVFATFGKNIGDVLTGLPDLLQTLISFFTGGAEDSTAETSSIIEAGSSTEE
>NZ_CP046455.1|WP_156231829.1|2637095_2637221_-|PorA-family-porin
MSDFLTTWSAASSDGIFGEVFGLLDTAGTWAGALADLLGLL
>NZ_CP046455.1|WP_156232843.1|2656373_2656610_-|hypothetical-protein
MVATDTTFGITAIVAWFLSGFLGVSCLGLYFSENNKRRASGFYSHVDWKKGIFYATVAALVIAVLWSAVDIALWAGKL
>NZ_CP046455.1|WP_156231851.1|2657336_2658719_+|M20/M25/M40-family-metallo-hydrolase
MSTPTHLPLSAEIRTHALTQKEEVFRQLSELVAFDSVHGESGHEEDCRSAAAWVSQALTEAGLTVDEIVTADGSIALVGQRHISAEAPTVLLYSHYDVVLAGERTKWLSDPFTLTEREGRWYGRGSADCKGNLVMHLAALRTLEQFEETPRVNLKVLIEGSEEQGGEGLDKLIAERPELFAADAILIADTGNAAVGKPTLTTSLRGGAQVTVTLNTLRTPVHSGMFGGAAPDAVAALVRLLNTLRDERGRTVIDGVDTSTRWEGEPYDAETFRADAGVLGGVELMGDESDSPADFVWARPSVTITGFTSTPVAEAVNAVPATASARLNLRVGPGTSAADTAAKLAEHLRHNTPWGALVEVEVADVNEPFSADTSSPALSLLGKALASAYGAEQTGTVGSGGSIPLCTALQQAHPEAEIALFGVEEPQSTIHSPNESVDPSEILHIAAAEALFLLNYGDQN
>NZ_CP046455.1|WP_156232845.1|2658985_2659507_+|acetyl-CoA-acetyltransferase
MRQTASLNPSQPTRTRSEDPLQNRFGAHHRLPRGLREEAAGMDWNLFTATYAPSANIRLHHRKIEKLRGGLYRFHTELIHSSKTAEPHTERRELISTGPTSACSTLLAEAGCRTEILSFHQLEIFAATATFLQVTNDRRTVWAIGFGPSPEASVTAAMSSGAQRLNDTQRLYN
>NZ_CP046455.1|WP_156232847.1|2659514_2660144_-|hypothetical-protein
MLWLAFNVRLPDLEVIQAWLEGLGWAGFLGFILLYALVALTPIPVTIMALAGGLLYGVVVGSVLSVVGALLGCWGAYWIARGLGKETVKKLLGDYGAKVEGHLEGAGFQAVFMLRVMPGLPYWPVNYGAGVFGINHRDYLVASSIAIVPGQVSLIAIGNFISEPNLSNGVIVGVAWAVVLAMTGWGYFTWRDARREAEAGAGPGPAGRR
>NZ_CP046455.1|WP_156231853.1|2660654_2663672_+|Na+/H+-antiporter-subunit-A
MLITLMALTAAAVVAPALIRLIGRPAFGLLALVPAAGFAWVLSQFFRGTFDNGGALEFRSPWMPSANLDLNLRLDSLAGLFSLIILGVGALVLIYCWGYFDSNPRRLSYFGAQMVAFAGAMFGLVISDNILLMYVFWEITSVLSFLLVGYYGERASSRRSAGQALMVTTLGGLAMLVGIILLGRQTGIWNFSDIPQYTDLAVTPYFMATIVLILAGALSKSAIAPAHFWLPGAMAAPTPVSAYLHSAAMVKAGIYLVARLAPDFNVVNAWHLVVIPLGLFTMIMSGWMALRQKDLKLILAYGTVSQLGFIMSVISIGSREAMLAGLALTFGHSLFKATLFMIVGAIDHTAGTRDIRQLSGLGRKQPLVMVLAVIAAASMAGIPPLLGFVAKETALDAVLNESLLVGMPRNLMIVGMVLGSILTMAYSLYFVYEAFATKKEGHISGGGTSPAVAKMHPIGFELWVAPMVLTFLTVGLGLFPGALSWLIELHLDAVLPLAPGEEATYLALWHGFNLPLLLSLVIIALGALLFWQRKFIAKFTFEQPALGDADSAYDWVLDQLRKISLRLTASTQRGSLTINLGVIFIVLLSLPLISLILGERNDVRMVLWDTPYQAIAAVVIVIMSVAATQAQNRLSGVIMVGVTGYTMAMIFAFHGAPDLALTQTLVETIVMVVFMLVLRKLPTETEWKGTPKGNRFRAWLSIAVGFSVTLVALFAINARSEEPISKFMPDLAYDISHGANAVNVLLVDIRAFDTFGEISVLVIAATGVASLIYRTRSFSRESRRPTLRTTGRRWLAAPVETEKAQNRSLMVDIVTRLLFPAMMVVSLYFFFAGHNAPGGGFAGGLVAALAFTLRYLAGGRDELEEALPVDAGRILGAGLLASAAAVLLPLFWGRPPLSSHSWDIVLPLIGDMHIPSVLLFDAGVYLIVVGLIMHVLTSLGGQLDRDEEMRKQRARDRARAMTRAVERRRTEQQQRLAASSAAPEHSSQSPPSGTSTSKHHTGKES
>NZ_CP046455.1|WP_156231855.1|2663674_2664166_+|Na(+)/H(+)-antiporter-subunit-C
MVANLFLLIAAGSMIAAGVYLMLDRAMTKMMMGILLLGNGANLLILMSGGSAGSPPIMNRDSEVYDDRIADPLAQAMILTAIVISMAMTAFILTLAYRQYRYRTADLIEDDTEDAAIAARPSTASAAPDHDASDDPETGRLTSEGDSFGPKSFEAPVKGEEDD
>NZ_CP046455.1|WP_156232849.1|2664188_2665916_+|Na+/H+-antiporter-subunit-D
MLPYMIPLPIVLPAIAAALALLLSRFPTLQRVVALVTLALVIIISATMVWVVDGAGIQTVQIGGWEAPVGITLVADRLSVLMLTVSALVLFCVMWYAISQGIRDGGKDEPVAVFMPTYLLLSMGVNLSFLSGDLFNLYVGFEVFLVASYVLLTLGGSPSRVRAGVGYVMVSMASSMIFLFGLAMVYASVGTMNLAQIGLRMEDVPSGTRAAIFSTLLVAFGIKAAVFPLDAWLPDSYPTAPSLVTAVFAGLLTKVGVYSIIRIRSVIFTDGSLDTLLMWVALATMLVGILGAMAQNDIKRLLSFTLVSHIGYMIFGIAIGSAQGLSGAIFYAIHHILVQTALFLVVGLIERQAGTSSLRRLGSLAYISPVLAILYFIPAINLGGIPPFSGFLGKIILLEAGANEGGWMAWVLIGGAVVTSLLTLYTMVLVWSKGFWRDRMDAPEGSVAMARPAPLADVTDEVKFTDRKDVGKMPFGMVGATAALVIASLSLTVGAGQLSGITDRAAESAQDVNIYRTAVLGGNMDNPTRNLEQNRLDDGRDDRQNREHELPKPPPVNETSTTDAPAAVAVNEEEQ
>NZ_CP046455.1|WP_156231857.1|2665912_2666422_+|Na+/H+-antiporter-subunit-E
MMTGLKNRFRPGSIIWLTILWMGLQGEFTIANLLAGLVLALLITFGLPLPAMPIYGLRINWGPFFQLMGSWIFNLMLASAKVAWLALRPQAPPKTSIVQVPMRVQNDLVLAFGTMLFNLQPGGSVTDIDIANRMWTIHLLDTDTEEQLQAEIANVATLERRLINAFERS
>NZ_CP046455.1|WP_156231859.1|2666427_2666703_+|cation:proton-antiporter
MDPAIYNSILIIASLFFSASFLMTMWAILIGPNSLDRLLGLDGLVAMIQCALATYICWTLDTTVSNAMLVVALLGFISTVSVARFRKRDGS
>NZ_CP046455.1|WP_156231862.1|2666702_2667083_+|cation:proton-antiporter
MDLHVITDIISLVLLLTGGFLAFSASVGLLRFKDTMSKVHAITKPQTTGLILAVTGTIIRVLGSPDFSPAERGDLGVLLLLVIFALLTSPVTAQRVGRIGRREGLYGEKGKMLENEAPADRSLRRR

Crispr_ID: NZ_CP046455_2

• CRISPR_ID: NZ_CP046455_2
• CRISPR_location: 2997109-2997284
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 2 spacers

Consensus repeat of NZ_CP046455_2

Consensus_repeat	Method
CCACCCTGGCTGCTCTGGTTCCCACCAAAACCGCCCTG	CRISPRCasFinder

spacers of NZ_CP046455_2

>2.1|2997147|31|NZ_CP046455|CRISPRCasFinder
GCTGGGCTGAGCGGGCTGAGCGCCCCCAAAA
>2.2|2997216|31|NZ_CP046455|CRISPRCasFinder
ATTGCCCTGGTTGCCGCCGAAACCACCCTGG

CRISPR arrays and Neighbor proteins around NZ_CP046455_2

CRISPR arrays

The CRISPR arrays of NZ_CP046455_2

>merge|NZ_CP046455|2|2997109-2997284|CRISPRCasFinder
CCACCCTGGCTGCTCTGGTTCCCACCAAAACCGCCCTGGCTGGGCTGAGCGGGCTGAGCGCCCCCAAAACCACCCTGGCTGCTCTGGTTCCCACCAAAACCGCCCTGATTGCCCTGGTTGCCGCCGAAACCACCCTGGCCACCCTGGCCGCCTTGGTTTCCACCAAAGCCGCCCTG

>NZ_CP046455|2|2|2997109-2997284|CRISPRCasFinder
CCACCCTGGCTGCTCTGGTTCCCACCAAAACCGCCCTG	GCTGGGCTGAGCGGGCTGAGCGCCCCCAAAA
CCACCCTGGCTGCTCTGGTTCCCACCAAAACCGCCCTG	ATTGCCCTGGTTGCCGCCGAAACCACCCTGG
CCACCCTGGCCGCCTTGGTTTCCACCAAAGCCGCCCTG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046455.1|WP_156232268.1|3004094_3005192_+|inositol-3-phosphate-synthase	unknown	unknown	gnl|CDD|132491
NZ_CP046455.1|WP_156232914.1|2989927_2990131_+|transporter	unknown	unknown	gnl|CDD|225328
NZ_CP046455.1|WP_156232254.1|2996445_2996898_-|50S-ribosomal-protein-L9	unknown	unknown	gnl|CDD|234659
NZ_CP046455.1|WP_156232266.1|3003497_3003860_-|hypothetical-protein	unknown	unknown	gnl|CDD|379953
NZ_CP046455.1|WP_156232242.1|2988213_2989080_-|PspA/IM30-family-protein	unknown	unknown	gnl|CDD|224755
NZ_CP046455.1|WP_156232240.1|2986799_2988137_+|NYN-domain-containing-protein	unknown	unknown	gnl|CDD|224349
NZ_CP046455.1|WP_156232248.1|2991722_2991902_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP046455.1|WP_156232916.1|3001127_3003215_-|penicillin-binding-protein	unknown	unknown	gnl|CDD|223815
NZ_CP046455.1|WP_156232246.1|2990385_2991726_+|MFS-transporter	unknown	unknown	gnl|CDD|273327
NZ_CP046455.1|WP_156232262.1|2999013_2999205_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP046455.1|WP_156232244.1|2989307_2989706_-|thioredoxin	unknown	unknown	gnl|CDD|239245
NZ_CP046455.1|WP_156232238.1|2986212_2986587_-|GntR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224639
NZ_CP046455.1|WP_156232264.1|2999218_3000883_-|DUF2029-domain-containing-protein	unknown	unknown	gnl|CDD|227937
NZ_CP046455.1|WP_156232252.1|2993887_2995777_-|glycoside-hydrolase-family-15-protein	unknown	unknown	gnl|CDD|225922
NZ_CP046455.1|WP_156232272.1|3005911_3006865_+|universal-stress-protein	unknown	unknown	gnl|CDD|366180
NZ_CP046455.1|WP_156232258.1|2997804_2998092_-|30S-ribosomal-protein-S6	unknown	unknown	gnl|CDD|179034
NZ_CP046455.1|WP_156232250.1|2992211_2993741_-|replicative-DNA-helicase	unknown	unknown	gnl|CDD|180177
NZ_CP046455.1|WP_156232918.1|3006895_3007540_+|SDR-family-oxidoreductase	unknown	unknown	gnl|CDD|181298
NZ_CP046455.1|WP_156232260.1|2998293_2998731_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP046455.1|WP_156232270.1|3005379_3005841_+|MarR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|197670

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP046455.1|WP_156232914.1|2989927_2990131_+|transporter	gnl|CDD|225328	COG2608, CopZ, Copper chaperone [Inorganic ion transport and metabolism].	1.04642e-14
NZ_CP046455.1|WP_156232254.1|2996445_2996898_-|50S-ribosomal-protein-L9	gnl|CDD|234659	PRK00137, rplI, 50S ribosomal protein L9; Reviewed.	4.5269e-55
NZ_CP046455.1|WP_156232266.1|3003497_3003860_-|hypothetical-protein	gnl|CDD|379953	pfam17249, DUF5318, Family of unknown function (DUF5318). This family of unknown function is mostly found in Actinobacteria.	2.78594e-32
NZ_CP046455.1|WP_156232242.1|2988213_2989080_-|PspA/IM30-family-protein	gnl|CDD|224755	COG1842, PspA, Phage shock protein A (IM30), suppresses sigma54-dependent transcription [Transcription / Signal transduction mechanisms].	1.07824e-29
NZ_CP046455.1|WP_156232240.1|2986799_2988137_+|NYN-domain-containing-protein	gnl|CDD|224349	COG1432, COG1432, Uncharacterized conserved protein [Function unknown].	3.64823e-27
NZ_CP046455.1|WP_156232916.1|3001127_3003215_-|penicillin-binding-protein	gnl|CDD|223815	COG0744, MrcB, Membrane carboxypeptidase (penicillin-binding protein) [Cell envelope biogenesis, outer membrane].	4.73052e-165
NZ_CP046455.1|WP_156232246.1|2990385_2991726_+|MFS-transporter	gnl|CDD|273327	TIGR00895, transport_protein, benzoate transport. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	7.44309e-68
NZ_CP046455.1|WP_156232268.1|3004094_3005192_+|inositol-3-phosphate-synthase	gnl|CDD|132491	TIGR03450, mycothiol_INO1, inositol 1-phosphate synthase, Actinobacterial type. This enzyme, inositol 1-phosphate synthase as found in Actinobacteria, produces an essential precursor for several different products, including mycothiol, which is a glutathione analog, and phosphatidylinositol, which is a phospholipid.	0
NZ_CP046455.1|WP_156232244.1|2989307_2989706_-|thioredoxin	gnl|CDD|239245	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functional TRXs have been reported in most organisms; in eukaryotes, they are located in the cytoplasm and the mitochondria. Higher plants contain more types (at least 20 TRX genes have been detected in the genome of Arabidopsis thaliana), two of which (types f amd m) are located in the same compartment, the chloroplast. Also included in the alignment are TRX-like domains which show sequence homology to TRX but do not contain the redox active CXXC motif. Group II proteins, in addition to either a redox active TRX or a TRX-like domain, also contain additional domains, which may or may not possess homology to known proteins.	2.71238e-33
NZ_CP046455.1|WP_156232238.1|2986212_2986587_-|GntR-family-transcriptional-regulator	gnl|CDD|224639	COG1725, COG1725, Predicted transcriptional regulators [Transcription].	9.33075e-31
NZ_CP046455.1|WP_156232264.1|2999218_3000883_-|DUF2029-domain-containing-protein	gnl|CDD|227937	COG5650, COG5650, Predicted integral membrane protein [Function unknown].	9.58498e-107
NZ_CP046455.1|WP_156232252.1|2993887_2995777_-|glycoside-hydrolase-family-15-protein	gnl|CDD|225922	COG3387, SGA1, Glucoamylase and related glycosyl hydrolases [Carbohydrate transport and metabolism].	1.19988e-120
NZ_CP046455.1|WP_156232272.1|3005911_3006865_+|universal-stress-protein	gnl|CDD|366180	pfam00582, Usp, Universal stress protein family. The universal stress protein UspA is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. UspA enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae UspA reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, though UspA lacks ATP-binding activity.	2.88191e-13
NZ_CP046455.1|WP_156232258.1|2997804_2998092_-|30S-ribosomal-protein-S6	gnl|CDD|179034	PRK00453, rpsF, 30S ribosomal protein S6; Reviewed.	6.55142e-39
NZ_CP046455.1|WP_156232250.1|2992211_2993741_-|replicative-DNA-helicase	gnl|CDD|180177	PRK05636, PRK05636, replicative DNA helicase; Provisional.	0
NZ_CP046455.1|WP_156232918.1|3006895_3007540_+|SDR-family-oxidoreductase	gnl|CDD|181298	PRK08219, PRK08219, SDR family oxidoreductase.	3.67244e-84
NZ_CP046455.1|WP_156232270.1|3005379_3005841_+|MarR-family-transcriptional-regulator	gnl|CDD|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	7.23988e-16

Protein sequences

>NZ_CP046455.1|WP_156232254.1|2996445_2996898_-|50S-ribosomal-protein-L9
MKLILTAAIDKLGVPGDIVEVKDGYGRNYLLPRGLAIVATRGAQKQIEGIKRAQEARAVRDLDHAREIREQLEALENVSVAVRTSDKGKLFGSVKSGDIADAVKAAGGPVLDKRNIEVPKNLIKSTGSYQVKVQLQDDIAAKVNFKVVAA
>NZ_CP046455.1|WP_156232252.1|2993887_2995777_-|glycoside-hydrolase-family-15-protein
MTVSNQLPQSVKKAHKSTPLEDYALLSDLHTGPLVSREGSIDWLCLPRFDSDAIFTAILGTPDDGRWKMSIVDGKVMSRQYRGNTFILETLWEGPRGTARVTDFMPPGDKQANLIRYVECLSGEVEIEHDMRVRFSYARVEPWFRPTEVPGSEEMGLLCTAGPDGVLISGPLLHQSKERREEEGDVLEPSGAPASRLTGRFRIREGQSRSWNLTWFRPWRELPVPAEPVAALWKAESFWEEWLSRLDTETVNRKHVVRSLLVLRALTHRETGGIAAAATASLPEDFGGVRNWDYRFTWLRDASLTVEVMVSHGLIKGAADWRDWLLRAVAGDPERLQIMYGLGGERQLPEQELDHLAGYENSRPVRIGNGAADQYQADVVGEVMLALARIRDAGYPETPYSWNLQTALLDYNISNFDRKDHGIWEMRGELHYFTHGRVMMWAAFNEGIRAVEEYGFEGDVETWIHYRDKLREEILTRGFSAELNSFTQTYEGTEVDASLLQLPHTGFIAPDDPKMLGTVAKVEQDLVDEHGLVYRYRTEAGLDGLAGDEYPFLICAFWLVEQYAVSGRLEEAKEDMKRLCGYANDVGLLAEEYDPKTQRLAGNFPQAFSHLALIRAADAINRMEKESNE
>NZ_CP046455.1|WP_156232250.1|2992211_2993741_-|replicative-DNA-helicase
MTSGISDASFDDDYVPPSDQDAPVQFDDPGPDYGPALPTPAFSSGGGSGGGGNRPARRRENRPASPATEFRQPPHDNEAEQGVLGAMLLAPTTVVEILEELTPDDFYKPAHQLIYGAIIDLFSDNKEIDPVIVAARLDRTNDLERVGGAPYLHTLISSVPTAANARYYAEIVSEKAILRRLVNAGTRVVQLGYEGTEGAEVDVVLDMAQQEVFAISQRNTSEDYAVLADILQPTMDELDELAAHGGVATGVPTGFEDLDNLTNGLHGGQMIIIAARPGVGKSTLGLDFMRSCSITHGKASVIFSLEMSKSEIAMRLLSAETEIKLSDMRSGRMTDEAWAKLANRVGQISEAPLFIDDSPNLTMMEIRSKARRLKQKHDLQLIIIDYLQLMSSGKKVESRQQEVSEFSRNLKLLAKELDVPVIAISQLNRGPEARTDKKPQLADLRESGSLEQDADMVMLLYRPDSQDRDSERAGEADIILAKHRGGPIDTVMVAHQLHYSRFVSMPRAG
>NZ_CP046455.1|WP_156232248.1|2991722_2991902_-|hypothetical-protein
MFVRDFNPDTIELNENIKVEHGEGKTLLTLPRDLADFAEPQEPRTLLERLQQVARQYLS
>NZ_CP046455.1|WP_156232246.1|2990385_2991726_+|MFS-transporter
MSRNARLDRLPVTAKHRRLLFGSGIGWALDAMDVGLISFIMAALAVHWNLSATQTSWLGSIGFVGMALGATFGGLLADRIGRRQVFALTLLVYGLATGASALAGSLAVLIALRFLVGLGLGAELPVASTLVSEFAPRKIRGRMVVLLEAFWAVGWLAAALIGAFVVSASENGWRWALALGCVPTLYAVYVRMGLPESVRFLEKKNRHEEAEEIVAAFEAEVDPAELAAIDERGRREAEEGVSTPEQDAFAREDSIWSPLLRRRTAALWIIWFCVNLSYYGAFIWIPSLLVDQGFTLVKSFTFTLIITLAQLPGYAVAAWLIEKWGRRMTLATLLLGSAAAAAFYGTAETEAMIILAGCLLSFFNLGAWGALYAIGPELYPTAVRGAGTGAAAGFGRIASIIAPLIVPPILIFGGPLLLFGLFALSFLIASAAAFTLPEQRGKVLEV
>NZ_CP046455.1|WP_156232914.1|2989927_2990131_+|transporter
MMTKNYVVEGMTCEHCISAVTDEITEVKGTQGVDVDLATGNVAVTGEGFSDEAIVAAVAEAGYKVRD
>NZ_CP046455.1|WP_156232244.1|2989307_2989706_-|thioredoxin
MATIDVTEDTFNDTVSSEGIVLVDAWATWCGPCKSFAPIYEKASEKHEEVKFTKLDVDANPGVSAALEISAVPTLFFFRDGIGVYRQSGVMNPAQLDDTLEQIKALDMDEVRRQVAAQNAEADAQEAQEDKA
>NZ_CP046455.1|WP_156232242.1|2988213_2989080_-|PspA/IM30-family-protein
MANPFSKGWKYLTASLDSKIDENADPKVQIQQATEAAKKQHQQITQHAAAIIGNKKQLEMKLDRLLASQKELQEQTRQALNAADQAAAQGDNTKSSQFNNTAEVFATQLVAVEQQIEGAKQQHTQAAAAAEQAEQQQKQSEIRLKEQLSQIDALRAQADQAAMQETATEAMDSMNALKPDTSVPTLDGVREKIERRYADALGAQELTQSTVGDRMAEIQAAGTDMKASARLAEIRAQMGGGNQLTAGEAPGPSEEASPEVPAEEKPDQGAPGQDKPGQDKPGAANGQQ
>NZ_CP046455.1|WP_156232240.1|2986799_2988137_+|NYN-domain-containing-protein
MLERTQVFVDTSYLLASFYNSWETGARAQLEIDLPEVVAVLGSMITNQLHQPVHRQFWYDGIPDSGPHRYQRALRTCDGVLLRAGQLIEWGERRTQKAVDTRLVVDMVLAAVRQQCSDIVLVSGDADMIPGVQEATNAGIRVHLYGFGWDSMSSALRHACDTTTILDPREDFAECMQLQVLEGPVPPAVPTKPIGDAEPLDDTSPTTVPSSALRPGPPATPAEKSTPVESPAEISTETHVDTSEPEAEAQPQPEPEPEPAATLPDPSPCVAADAGSTDTPVEQLPGAEPATPTAQSEAEPQQQLAEPTPTLPEGDVDKQEDSPVEEETRKAAKPGPPKPSMMAPRRKLRSRYVPLPNEVWVSAGSQTPFDVGQQYSSWWYDNAATAEQRDQAHLLSGGGLPPEIDRPLLQFACETLHEYTLSESQRVNLRDGFHAGIRGVLLNRP
>NZ_CP046455.1|WP_156232238.1|2986212_2986587_-|GntR-family-transcriptional-regulator
MDETAAPLYRQIAMLVEDSIVDESLRAGQQAPSTNELAAFHSINPATARKGLALLVETGILEKRRGLGMFVTTEARKLIMKRRREEFAAAYLAPLIDEAIKLGVARSEIHELIDAVAESRGLYT
>NZ_CP046455.1|WP_156232258.1|2997804_2998092_-|30S-ribosomal-protein-S6
MRQYEIMIILDPSQDERTVTPSLDKFLEVVRKDNGKVVKVDVWGKRRLAYPINKNEEGVYAVVDLECESATVLELDRLLNLNESILRTKVLRVDK
>NZ_CP046455.1|WP_156232260.1|2998293_2998731_-|hypothetical-protein
MNRSGIRGTIIALSGVAALFLTGCAGSEGPNPGTSTVAISTPVETVEEQPTQAPAESVAENTPPREDDGGEEAARGNSAPCEVSGYSGEGDRERREEGFSEQQVSDAVAQGCATAEWEDDDYWEIDLDWIEVDIRPDGTVIEVDD
>NZ_CP046455.1|WP_156232262.1|2999013_2999205_-|hypothetical-protein
MSDIWMIITMASVFIGFLCTGGAFAAFMYKKSKVLITALLIIALLLVTVVPVTIAVTVATSPG
>NZ_CP046455.1|WP_156232264.1|2999218_3000883_-|DUF2029-domain-containing-protein
MTSSPPSAPDIGHPEQRVSPAHSESISRGFITFLGGPLGHHARIGRQAWWTPLRTLILTSLVFLSFGYLAKANCTLGSRGEDGMVGLDWSGNRQYASFCYNDIVPLYGARGLDEGGFPYAYSWQEGDLTRYMEYPVLGGLFQGLMGFLTRVFYPVIDLLPGHSIPESGFYFALTAAFMSLMWVITIRMMAELAGNRIWDVVLVAASPLVIMHAFTNWDIPSIMAVAGAVLAVKRGHPLWAGILIGLGTAFKLWPLYILGAYLVLTVRNRTWGPFLKMLGAAIISWLLVNIPVMLAYPAAWNEFLRLNRERSWEWTTIYAVISRTTGWPGFDSGGGEPTILNTLTLLLFIGACLAIAIFGISVQRRPRVAELIFLIVAAFLLVNKVWSPQYSLWLVIPAVLALPRWRLLLTWMIVDALVWPVLMLHMMGTDNKGLPGGMLDLVILTRDGLIITMMVLVVLQMLGRIEDKVSQSHHGLDPLAGAFGQVDRFRLGGMGKNEEEATGGASRPDPQNPETLNAPEKIEGGAGSETPDASDASGNIGAPGSRTSEWNLKE
>NZ_CP046455.1|WP_156232916.1|3001127_3003215_-|penicillin-binding-protein
MVDVPEPEELPTPQVSQIMASDSSTELARIVPPEGNRRQVSVEEIPDYVKNAVLAAEDREFYTNPGFSITGFTRAVIGQITGDASAGGGSTITQQYVKKTLVGDEHSYVRKARELVYSVKMTNEWSKDEILGAYLNTVYFGRNAYGVEAAAQAYFNKPVTELGPDEAAVLAASIQLPSQLEPWTNPEAAQARWSYVLDGMVEIGTLGAEERAALDYPETRDPATVSAYTEATGPNGLIKNQVMTELASVGITEDEVNTRGLIVTTTIDPEVQAATVEAVNANMEGQNDNLRTAAVSMEPDTGAVRGYYGGEDATGWDYANAGLQTGSTFKIFGLAAALQQGIPLSTLYDSGPVTIPGGITISNVGGGSCGYCSIGEALKFSHNTSFIRLQQDLENETQDTADMAHALGMATSLPGIPETLTENGDLPYEGIILGQYQSRPLDMSIALATLANEGVWHQPHFVERVETGSGEVLYEFQGQEGERRVSEAVANNLMYAMQPIADYSGGALDGGRISASKTGTTQLGDTGYNRDAWMVGTTPQLATSVWVGTEDNTPIFTPWGGNMYGAGLPTDIWKDILDDSLVDEPIEYFPDPEPINWGNGLSVSNGNAYVPPPVIYNPAPVAPVAPAPAPSESEEVAPAPEESLAPAPAPAPAPAPPETGGGNPAPEDDGGGGDEGGIEIAPGLVIPEIEIPALP
>NZ_CP046455.1|WP_156232266.1|3003497_3003860_-|hypothetical-protein
MVVYRNEISHQWEKRNLLARWRAGAVTRDTVCDADFLLVTAARYHGTPATGSCPVCESDQLREVLWIHGDGLGRMSGTARSAAEIEEIVSTGRELRVHTVEVCPVCRWNHLLREVSASAT
>NZ_CP046455.1|WP_156232268.1|3004094_3005192_+|inositol-3-phosphate-synthase
MSETKIRVAIAGVGNCATSLVQGVEFYRNTPPGEKVPGLMHVQFGDYHVSDVEFVAAFDVDAAKVGQDLAVALEASENCTIKIADVPTTGVTVQRGPTLDGLGTHYREAVTESEADPVDVVQVLKDAKVDVLVSYLPVGSEQADKFYAQAAIDAGVAFVNALPVFIASDPEWAEKFRAAGVPIVGDDIKSQVGATITHRVMAKLFEDRGVRLDRTMQLNVGGNMDFKNMLDRDRLESKKISKTQAVTSNLKDGPLAGKVEDRNVHIGPSDYVAWLDDRKWAYVRLEGTAFGEVPLNLEYKLEVWDSPNSAGIIIDAVRAAKIALDRGLGGPILPASAYLMKSPPVQLGDDQARTELEAFIIGAED
>NZ_CP046455.1|WP_156232270.1|3005379_3005841_+|MarR-family-transcriptional-regulator
MNSPTPEEVARRIRPALTKLYVMYFRLSEQSSLTGPQLSLMTRLQENGASRISHLAKMEGIRMPTASNALHQLEQRGMVDRIRDTTDRRGVLVTLTDLGATELKRVGEERTKYLAEMLSTLDDKHLAKADDLSELINTLAETYGTVANSEKTN
>NZ_CP046455.1|WP_156232272.1|3005911_3006865_+|universal-stress-protein
MPNIETYSQDPNDTLRVLVAWRPDGRGSESLEFAAWLGRTTQIQVRVATTFLRPWPATSLGKLGGKYRKWIEREAAACETKVRKALKSVGLPEECWDEQISVFSDGPSEAVLLTQAANDFNADLMLLGSSSTAPKGRFLAGSTADTLLHSSPQLLGLVPRSPKLSKRGVTRINFAHLGENPEENSSLFFAADLASRWDIPLRILAFSPGGLTSSTASDQLDLSTHLTVEWREHSLAMLDRSRDAVMDHWPELSVETDIGSGSGWAGAVDALKWKKGDLLCLGSTPPGPIERVFLGSTATEVLSHVQVPVIVHPVRKH
>NZ_CP046455.1|WP_156232918.1|3006895_3007540_+|SDR-family-oxidoreductase
MTPHAFVTGASGGVGREIVARLLARGWRVTAQYRSSPGTAAATWWQADFTRPLPPLEMPERLDALIHCAGVAPVGPTQHFGREVWEETMAVNLHAPVDLSNRLLPALKAARGHVIYINSGAGQHTRPEWTLYSASKFAARAWCDGLRGENPEIRVTSVYPGRIATEMQRRIVGELGQAWEPESFLSPGTVAETILNALETPGDAHPTEITLRPR

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP046455_2	2.2|2997216|31|NZ_CP046455|CRISPRCasFinder	2997216-2997246	31	NZ_CP045959	Salmonella enterica subsp. enterica serovar Birkenhead strain AUSMDU00010532 plasmid pAUSMDU00010532_01, complete sequence	35483-35513	6	0.806
NZ_CP046455_2	2.2|2997216|31|NZ_CP046455|CRISPRCasFinder	2997216-2997246	31	NZ_CP045959	Salmonella enterica subsp. enterica serovar Birkenhead strain AUSMDU00010532 plasmid pAUSMDU00010532_01, complete sequence	215376-215406	6	0.806
NZ_CP046455_2	2.1|2997147|31|NZ_CP046455|CRISPRCasFinder	2997147-2997177	31	NZ_KT935446	Klebsiella pneumoniae strain Kp2964 plasmid 2964TF, complete sequence	133639-133669	7	0.774
NZ_CP046455_2	2.2|2997216|31|NZ_CP046455|CRISPRCasFinder	2997216-2997246	31	KY250482	Corynebacterium phage phi16, complete genome	40350-40380	7	0.774
NZ_CP046455_2	2.2|2997216|31|NZ_CP046455|CRISPRCasFinder	2997216-2997246	31	NZ_CP033725	Clavibacter michiganensis subsp. michiganensis strain UF1 plasmid pCM1-UF1, complete sequence	9694-9724	7	0.774
NZ_CP046455_2	2.1|2997147|31|NZ_CP046455|CRISPRCasFinder	2997147-2997177	31	NC_012520	Rhodococcus opacus B4 plasmid pROB01, complete sequence	190449-190479	8	0.742
NZ_CP046455_2	2.1|2997147|31|NZ_CP046455|CRISPRCasFinder	2997147-2997177	31	NZ_CP020810	Mycobacterium dioxanotrophicus strain PH-06 plasmid unnamed1, complete sequence	90845-90875	8	0.742
NZ_CP046455_2	2.1|2997147|31|NZ_CP046455|CRISPRCasFinder	2997147-2997177	31	NZ_CP020810	Mycobacterium dioxanotrophicus strain PH-06 plasmid unnamed1, complete sequence	92020-92050	8	0.742
NZ_CP046455_2	2.2|2997216|31|NZ_CP046455|CRISPRCasFinder	2997216-2997246	31	NZ_CP022775	Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence	263785-263815	8	0.742
NZ_CP046455_2	2.2|2997216|31|NZ_CP046455|CRISPRCasFinder	2997216-2997246	31	NC_014310	Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence	257333-257363	8	0.742
NZ_CP046455_2	2.2|2997216|31|NZ_CP046455|CRISPRCasFinder	2997216-2997246	31	NZ_CP022762	Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence	267977-268007	8	0.742
NZ_CP046455_2	2.2|2997216|31|NZ_CP046455|CRISPRCasFinder	2997216-2997246	31	NZ_CP023017	Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence	251372-251402	8	0.742
NZ_CP046455_2	2.2|2997216|31|NZ_CP046455|CRISPRCasFinder	2997216-2997246	31	NZ_CP014703	Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence	267977-268007	8	0.742
NZ_CP046455_2	2.2|2997216|31|NZ_CP046455|CRISPRCasFinder	2997216-2997246	31	NZ_CP022760	Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence	261201-261231	8	0.742
NZ_CP046455_2	2.2|2997216|31|NZ_CP046455|CRISPRCasFinder	2997216-2997246	31	NZ_CP022789	Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence	261190-261220	8	0.742
NZ_CP046455_2	2.2|2997216|31|NZ_CP046455|CRISPRCasFinder	2997216-2997246	31	NZ_CP022771	Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence	267989-268019	8	0.742
NZ_CP046455_2	2.2|2997216|31|NZ_CP046455|CRISPRCasFinder	2997216-2997246	31	NZ_CP022777	Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence	268010-268040	8	0.742
NZ_CP046455_2	2.2|2997216|31|NZ_CP046455|CRISPRCasFinder	2997216-2997246	31	NZ_CP022799	Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence	267976-268006	8	0.742
NZ_CP046455_2	2.2|2997216|31|NZ_CP046455|CRISPRCasFinder	2997216-2997246	31	NZ_CP022764	Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence	263805-263835	8	0.742
NZ_CP046455_2	2.2|2997216|31|NZ_CP046455|CRISPRCasFinder	2997216-2997246	31	NZ_CP022797	Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence	263804-263834	8	0.742
NZ_CP046455_2	2.2|2997216|31|NZ_CP046455|CRISPRCasFinder	2997216-2997246	31	NZ_CP022758	Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence	263800-263830	8	0.742
NZ_CP046455_2	2.2|2997216|31|NZ_CP046455|CRISPRCasFinder	2997216-2997246	31	NZ_CP016452	Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence	649535-649565	8	0.742
NZ_CP046455_2	2.2|2997216|31|NZ_CP046455|CRISPRCasFinder	2997216-2997246	31	NZ_CP032348	Azospirillum brasilense strain MTCC4039 plasmid p4, complete sequence	78708-78738	8	0.742
NZ_CP046455_2	2.1|2997147|31|NZ_CP046455|CRISPRCasFinder	2997147-2997177	31	NZ_CP044084	Pseudomonas luteola strain FDAARGOS_637 plasmid unnamed1, complete sequence	44408-44438	9	0.71
NZ_CP046455_2	2.1|2997147|31|NZ_CP046455|CRISPRCasFinder	2997147-2997177	31	NZ_CP040760	Paracoccus sp. 2251 plasmid unnamed6, complete sequence	67146-67176	10	0.677

1. spacer 2.2|2997216|31|NZ_CP046455|CRISPRCasFinder matches to NZ_CP045959 (Salmonella enterica subsp. enterica serovar Birkenhead strain AUSMDU00010532 plasmid pAUSMDU00010532_01, complete sequence) position: , mismatch: 6, identity: 0.806

--attgccctggttgccgccgaaaccaccctgg	CRISPR spacer
aaactgac--ggtggccgccgacaccaccctgg	Protospacer
  *.** *  *** ******** **********

2. spacer 2.2|2997216|31|NZ_CP046455|CRISPRCasFinder matches to NZ_CP045959 (Salmonella enterica subsp. enterica serovar Birkenhead strain AUSMDU00010532 plasmid pAUSMDU00010532_01, complete sequence) position: , mismatch: 6, identity: 0.806

--attgccctggttgccgccgaaaccaccctgg	CRISPR spacer
aaactgac--ggtggccgccgacaccaccctgg	Protospacer
  *.** *  *** ******** **********

3. spacer 2.1|2997147|31|NZ_CP046455|CRISPRCasFinder matches to NZ_KT935446 (Klebsiella pneumoniae strain Kp2964 plasmid 2964TF, complete sequence) position: , mismatch: 7, identity: 0.774

gctgggctgagcgggctgagcgcccccaaaa	CRISPR spacer
tctgtgctgagcgggctgatcgccggcgaag	Protospacer
 *** ************** ****  *.**.

4. spacer 2.2|2997216|31|NZ_CP046455|CRISPRCasFinder matches to KY250482 (Corynebacterium phage phi16, complete genome) position: , mismatch: 7, identity: 0.774

attgccctggttgccgccgaaaccaccctgg	CRISPR spacer
ctgagactggttgccaccaaaaccaccctgg	Protospacer
 * .  *********.**.************

5. spacer 2.2|2997216|31|NZ_CP046455|CRISPRCasFinder matches to NZ_CP033725 (Clavibacter michiganensis subsp. michiganensis strain UF1 plasmid pCM1-UF1, complete sequence) position: , mismatch: 7, identity: 0.774

attgccctggttgccgccgaaacc---accctgg	CRISPR spacer
cgtgcccgggttgccgccgaaacctcggccc---	Protospacer
  ***** ****************   .***   

6. spacer 2.1|2997147|31|NZ_CP046455|CRISPRCasFinder matches to NC_012520 (Rhodococcus opacus B4 plasmid pROB01, complete sequence) position: , mismatch: 8, identity: 0.742

gctgggctgagcgggctgagcgcccccaaaa	CRISPR spacer
gttgggctgagcgggcagagcgaccgcgggc	Protospacer
*.************** ***** ** *... 

7. spacer 2.1|2997147|31|NZ_CP046455|CRISPRCasFinder matches to NZ_CP020810 (Mycobacterium dioxanotrophicus strain PH-06 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.742

gctgggctgagcgggctgagcgcccccaaaa	CRISPR spacer
tcggggttgagcgggctgaccgccccgttca	Protospacer
 * ***.************ ******    *

8. spacer 2.1|2997147|31|NZ_CP046455|CRISPRCasFinder matches to NZ_CP020810 (Mycobacterium dioxanotrophicus strain PH-06 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.742

gctgggctgagcgggctgagcgcccccaaaa	CRISPR spacer
tcggggttgagcgggctgaccgccccgttca	Protospacer
 * ***.************ ******    *

9. spacer 2.2|2997216|31|NZ_CP046455|CRISPRCasFinder matches to NZ_CP022775 (Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.742

attgccctggttgccgccgaaaccaccctgg	CRISPR spacer
gatgccctggttgccgccaaagccaccggtc	Protospacer
. ****************.**.*****    

10. spacer 2.2|2997216|31|NZ_CP046455|CRISPRCasFinder matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 8, identity: 0.742

attgccctggttgccgccgaaaccaccctgg	CRISPR spacer
gatgccctggttgccgccaaagccaccggtc	Protospacer
. ****************.**.*****    

11. spacer 2.2|2997216|31|NZ_CP046455|CRISPRCasFinder matches to NZ_CP022762 (Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.742

attgccctggttgccgccgaaaccaccctgg	CRISPR spacer
gatgccctggttgccgccaaagccaccggtc	Protospacer
. ****************.**.*****    

12. spacer 2.2|2997216|31|NZ_CP046455|CRISPRCasFinder matches to NZ_CP023017 (Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.742

attgccctggttgccgccgaaaccaccctgg	CRISPR spacer
gatgccctggttgccgccaaagccaccggtc	Protospacer
. ****************.**.*****    

13. spacer 2.2|2997216|31|NZ_CP046455|CRISPRCasFinder matches to NZ_CP014703 (Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence) position: , mismatch: 8, identity: 0.742

attgccctggttgccgccgaaaccaccctgg	CRISPR spacer
gatgccctggttgccgccaaagccaccggtc	Protospacer
. ****************.**.*****    

14. spacer 2.2|2997216|31|NZ_CP046455|CRISPRCasFinder matches to NZ_CP022760 (Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.742

attgccctggttgccgccgaaaccaccctgg	CRISPR spacer
gatgccctggttgccgccaaagccaccggtc	Protospacer
. ****************.**.*****    

15. spacer 2.2|2997216|31|NZ_CP046455|CRISPRCasFinder matches to NZ_CP022789 (Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.742

attgccctggttgccgccgaaaccaccctgg	CRISPR spacer
gatgccctggttgccgccaaagccaccggtc	Protospacer
. ****************.**.*****    

16. spacer 2.2|2997216|31|NZ_CP046455|CRISPRCasFinder matches to NZ_CP022771 (Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.742

attgccctggttgccgccgaaaccaccctgg	CRISPR spacer
gatgccctggttgccgccaaagccaccggtc	Protospacer
. ****************.**.*****    

17. spacer 2.2|2997216|31|NZ_CP046455|CRISPRCasFinder matches to NZ_CP022777 (Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.742

attgccctggttgccgccgaaaccaccctgg	CRISPR spacer
gatgccctggttgccgccaaagccaccggtc	Protospacer
. ****************.**.*****    

18. spacer 2.2|2997216|31|NZ_CP046455|CRISPRCasFinder matches to NZ_CP022799 (Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.742

attgccctggttgccgccgaaaccaccctgg	CRISPR spacer
gatgccctggttgccgccaaagccaccggtc	Protospacer
. ****************.**.*****    

19. spacer 2.2|2997216|31|NZ_CP046455|CRISPRCasFinder matches to NZ_CP022764 (Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.742

attgccctggttgccgccgaaaccaccctgg	CRISPR spacer
gatgccctggttgccgccaaagccaccggtc	Protospacer
. ****************.**.*****    

20. spacer 2.2|2997216|31|NZ_CP046455|CRISPRCasFinder matches to NZ_CP022797 (Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.742

attgccctggttgccgccgaaaccaccctgg	CRISPR spacer
gatgccctggttgccgccaaagccaccggtc	Protospacer
. ****************.**.*****    

21. spacer 2.2|2997216|31|NZ_CP046455|CRISPRCasFinder matches to NZ_CP022758 (Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.742

attgccctggttgccgccgaaaccaccctgg	CRISPR spacer
gatgccctggttgccgccaaagccaccggtc	Protospacer
. ****************.**.*****    

22. spacer 2.2|2997216|31|NZ_CP046455|CRISPRCasFinder matches to NZ_CP016452 (Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence) position: , mismatch: 8, identity: 0.742

attgccctggttgccgccgaaaccaccctgg	CRISPR spacer
ggagcgctggttgccgccgacaccacgcacg	Protospacer
.  ** ************** ***** *  *

23. spacer 2.2|2997216|31|NZ_CP046455|CRISPRCasFinder matches to NZ_CP032348 (Azospirillum brasilense strain MTCC4039 plasmid p4, complete sequence) position: , mismatch: 8, identity: 0.742

attgccctggttgccgccgaaaccaccctgg	CRISPR spacer
ttcttcgaggttgccgccgatcccaccctgg	Protospacer
 *. .*  ************  *********

24. spacer 2.1|2997147|31|NZ_CP046455|CRISPRCasFinder matches to NZ_CP044084 (Pseudomonas luteola strain FDAARGOS_637 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.71

gctgggctgagcgggctgagcgcccccaaaa	CRISPR spacer
tctgtgctgagctggctgagcgcccatggcc	Protospacer
 *** ******* ************ ...  

25. spacer 2.1|2997147|31|NZ_CP046455|CRISPRCasFinder matches to NZ_CP040760 (Paracoccus sp. 2251 plasmid unnamed6, complete sequence) position: , mismatch: 10, identity: 0.677

gctgggctgagcgggctgagcgcccccaaaa	CRISPR spacer
atcctgctgagcgcgctgaccgcccccatcg	Protospacer
...  ******** ***** ********  .

2. NZ_CP046456

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP046456_1

• CRISPR_ID: NZ_CP046456_1
• CRISPR_location: 90554-90647
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP046456_1

Consensus_repeat	Method
AGGCAAGTGTCGACAGTCGTCAA	CRISPRCasFinder

spacers of NZ_CP046456_1

>1.1|90577|48|NZ_CP046456|CRISPRCasFinder
CCACTCAAGTGATGTTGCTCACCAGTCGGGGGTAAGGTGATACACCCC

CRISPR arrays and Neighbor proteins around NZ_CP046456_1

CRISPR arrays

The CRISPR arrays of NZ_CP046456_1

>merge|NZ_CP046456|1|90554-90647|CRISPRCasFinder
AGGCAAGTGTCGACAGTCGTCAACCACTCAAGTGATGTTGCTCACCAGTCGGGGGTAAGGTGATACACCCCAGGCAAGTGTCGACAGTCGTCAA

>NZ_CP046456|1|1|90554-90647|CRISPRCasFinder
AGGCAAGTGTCGACAGTCGTCAA	CCACTCAAGTGATGTTGCTCACCAGTCGGGGGTAAGGTGATACACCCC
AGGCAAGTGTCGACAGTCGTCAA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046456.1|WP_156233105.1|104684_104921_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP046456.1|WP_156233082.1|84904_86356_+|aldehyde-dehydrogenase-family-protein	unknown	unknown	gnl|CDD|143423
NZ_CP046456.1|WP_156233097.1|97137_98208_-|restriction-endonuclease	unknown	unknown	gnl|CDD|226612
NZ_CP046456.1|WP_156233074.1|75188_76718_+|DASS-family-sodium-coupled-anion-symporter	unknown	unknown	gnl|CDD|273267
NZ_CP046456.1|WP_156233071.1|73791_74403_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP046456.1|WP_156233078.1|80726_81701_-|LysR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|176148
NZ_CP046456.1|WP_156233091.1|92446_93088_+|FCD-domain-containing-protein	unknown	unknown	gnl|CDD|224715
NZ_CP046456.1|WP_156233135.1|94201_95005_+|alpha/beta-fold-hydrolase	unknown	unknown	gnl|CDD|131480
NZ_CP046456.1|WP_156233069.1|73471_73771_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP046456.1|WP_156233133.1|81807_83412_+|benzoylformate-decarboxylase	unknown	unknown	gnl|CDD|235931
NZ_CP046456.1|WP_156233103.1|104100_104688_+|AAA-family-ATPase	unknown	unknown	gnl|CDD|349760
NZ_CP046456.1|WP_156233083.1|87815_89129_-|alpha-hydroxy-acid-oxidizing-enzyme	unknown	unknown	gnl|CDD|376451
NZ_CP046456.1|WP_156233076.1|77020_78361_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP046456.1|WP_156233085.1|89131_90463_-|MFS-transporter	unknown	unknown	gnl|CDD|340927
NZ_CP046456.1|WP_156233101.1|99137_99566_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP046456.1|WP_156233095.1|95135_96404_+|amidohydrolase-family-protein	unknown	unknown	gnl|CDD|238624
NZ_CP046456.1|WP_156233089.1|91402_92290_+|FAA-hydrolase-family-protein	unknown	unknown	gnl|CDD|223257
NZ_CP046456.1|WP_156233093.1|93285_94149_+|DUF2437-domain-containing-protein	unknown	unknown	gnl|CDD|223257
NZ_CP046456.1|WP_156233099.1|98557_99112_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP046456.1|WP_156233080.1|83308_84808_+|MFS-transporter	unknown	unknown	gnl|CDD|273327

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP046456.1|WP_156233082.1|84904_86356_+|aldehyde-dehydrogenase-family-protein	gnl|CDD|143423	cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogenase, DoxF-like. Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD.	0
NZ_CP046456.1|WP_156233097.1|97137_98208_-|restriction-endonuclease	gnl|CDD|226612	COG4127, COG4127, Uncharacterized conserved protein [Function unknown].	2.89672e-38
NZ_CP046456.1|WP_156233074.1|75188_76718_+|DASS-family-sodium-coupled-anion-symporter	gnl|CDD|273267	TIGR00785, Uncharacterized_transporter_HI_0020, anion transporter. The Divalent Anion:Na+ Symporter (DASS) Family (TC 2.A.47) Functionally characterized proteins of the DASS family transport (1) organic di- and tricarboxylates of the Krebs Cycle as well as dicarboxylate amino acid, (2) inorganic sulfate and (3) phosphate. The animal NaDC-1 cotransport 3 Na+ with each dicarboxylate. Protonated tricarboxylates are also cotransported with 3Na+. [Transport and binding proteins, Anions, Transport and binding proteins, Cations and iron carrying compounds].	4.29527e-63
NZ_CP046456.1|WP_156233078.1|80726_81701_-|LysR-family-transcriptional-regulator	gnl|CDD|176148	cd08459, PBP2_DntR_NahR_LinR_like, The C-terminal substrate binding domain of LysR-type transcriptional regulators that are involved in the catabolism of dinitrotoluene, naphthalene and gamma-hexachlorohexane; contains the type 2 periplasmic binding fold. This CD includes LysR-like bacterial transcriptional regulators, DntR, NahR, and LinR, which are involved in the degradation of aromatic compounds. The transcription of the genes encoding enzymes involved in such degradation is regulated and expression of these enzymes is enhanced by inducers, which are either an intermediate in the metabolic pathway or compounds to be degraded. DntR from Burkholderia species controls genes encoding enzymes for oxidative degradation of the nitro-aromatic compound 2,4-dinitrotoluene. The active form of DntR is homotetrameric, consisting of a dimer of dimers. NahR is a salicylate-dependent transcription activator of the nah and sal operons for naphthalene degradation. Salicylic acid is an intermediate of the oxidative degradation of the aromatic ring in soil bacteria. LinR positively regulates expression of the genes (linD and linE) encoding enzymes for gamma-hexachlorocyclohexane (a haloorganic insecticide) degradation. Expression of linD and linE are induced by their substrates, 2,5-dichlorohydroquinone (2,5-DCHQ) and chlorohydroquinone (CHQ). The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.76732e-33
NZ_CP046456.1|WP_156233135.1|94201_95005_+|alpha/beta-fold-hydrolase	gnl|CDD|131480	TIGR02427, b-ketoadipate_enol-lactone_hydrolase, 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate. [Energy metabolism, Other].	1.51845e-40
NZ_CP046456.1|WP_156233133.1|81807_83412_+|benzoylformate-decarboxylase	gnl|CDD|235931	PRK07092, PRK07092, benzoylformate decarboxylase; Reviewed.	0
NZ_CP046456.1|WP_156233083.1|87815_89129_-|alpha-hydroxy-acid-oxidizing-enzyme	gnl|CDD|376451	pfam01070, FMN_dh, FMN-dependent dehydrogenase.	3.71573e-161
NZ_CP046456.1|WP_156233091.1|92446_93088_+|FCD-domain-containing-protein	gnl|CDD|224715	COG1802, GntR, Transcriptional regulators [Transcription].	8.94202e-41
NZ_CP046456.1|WP_156233085.1|89131_90463_-|MFS-transporter	gnl|CDD|340927	cd17369, MFS_ShiA_like, Shikimate transporter and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Escherichia coli shikimate transporter (ShiA), inner membrane metabolite transport protein YhjE, and other putative metabolite transporters. ShiA is involved in the uptake of shikimate, an aromatic compound involved in siderophore biosynthesis. It has been suggested that YhjE may mediate the uptake of osmoprotectants. The ShiA-like subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.93267e-140
NZ_CP046456.1|WP_156233103.1|104100_104688_+|AAA-family-ATPase	gnl|CDD|349760	cd02042, ParAB_family, partition proteins ParAB family. ParA and ParB of Caulobacter crescentus belong to a conserved family of bacterial proteins implicated in chromosome segregation. ParB binds to DNA sequences adjacent to the origin of replication and localizes to opposite cell poles shortly following the initiation of DNA replication. ParB regulates the ParA ATPase activity by promoting nucleotide exchange in a fashion reminiscent of the exchange factors of eukaryotic G proteins. ADP-bound ParA binds single-stranded DNA, whereas the ATP-bound form dissociates ParB from its DNA binding sites. Increasing the fraction of ParA-ADP in the cell inhibits cell division, suggesting that this simple nucleotide switch may regulate cytokinesis. ParA shares sequence similarity to a conserved and widespread family of ATPases which includes the repA protein of the repABC operon in Rhizobium etli symbiotic plasmid. This operon is involved in the plasmid replication and partition.	1.18354e-27
NZ_CP046456.1|WP_156233095.1|95135_96404_+|amidohydrolase-family-protein	gnl|CDD|238624	cd01299, Met_dep_hydrolase_A, Metallo-dependent hydrolases, subgroup A is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.	1.35072e-95
NZ_CP046456.1|WP_156233089.1|91402_92290_+|FAA-hydrolase-family-protein	gnl|CDD|223257	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism].	5.24668e-89
NZ_CP046456.1|WP_156233093.1|93285_94149_+|DUF2437-domain-containing-protein	gnl|CDD|223257	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism].	2.92228e-93
NZ_CP046456.1|WP_156233080.1|83308_84808_+|MFS-transporter	gnl|CDD|273327	TIGR00895, transport_protein, benzoate transport. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	9.80572e-91

Protein sequences

>NZ_CP046456.1|WP_156233085.1|89131_90463_-|MFS-transporter
MTSHVDTLSSTPPQTSRRARKALIAAMSGTLIEWYDYALYGAAAGLIIGPLFFPDALSTAATLAAFATFAVGFIIRPLGGVVISHIGDRYGRKPAMILTIVLMGAATVGIGLMPTAASIGLWAPILLVVFRLLQGFGAGAELAGAFTLVAETSPKEKRGFHTGLVNATPAAGTTLATLGFLLVSTLPEDVLLGWAWRVPFLFSALLFFIALYIRRELEETPEYVHAVDNREAASHEQKVPLGELFKHSRRPLIAGFLATTGHNAHLYVVTTFSLSYLTATVGMSRSQALTAVVIASVAGIVASPIGGLMTDRFGARKVLGFGGLFGALYAFPLFLMMQTGDLPIVIIGLTIGYGVTLGATMGSQGAFLTNLFPARYRFTGVATAREFNGALIAGTTPLVATVLIQIAGGEIWLAALYIVACSLVTLLAVMIAGTLGNRPFEEN
>NZ_CP046456.1|WP_156233083.1|87815_89129_-|alpha-hydroxy-acid-oxidizing-enzyme
MSPSNPKTPLPTRAQHRLERQLPKWSELRPLMQFSSLDLDRRRARLNKAADLWDLRAIAQRRTPKVAFDYVDGAANQEISLDRTRQTFRDVEFTPGVLRDVSCVDLSTAIAGGTSALPFGIAPTGFTRMMHSGGEKAGVAAAHNKGIPFTLSTMGTSSIEEVAAAGPDGRRWFQLYLWKEREKSLALIERAAAAGYDTLLVTVDTAVAGARLRDVRNGMTIPPSLTLKTVLDASYRPEWWFNFLTTEPLKFATLSGHTGSIADLVTTMFDPTLTFDDLAWLRQAWKGRLFVKGIQSVDDARRVADCGVDGIVVSNHGGRQLDRAPVPLRLVPDIRSAVGSDLEIILDSGIMNGGDIVAALAAGADFTLIGRGYLYGLMAGGQEGVERAIDILRSEIQVVMQLLGVTAVSELTSDYLCLDREKPLLVSSLEHPTAFSR
>NZ_CP046456.1|WP_156233082.1|84904_86356_+|aldehyde-dehydrogenase-family-protein
MQTQLIIDNKPTDATNGATFERVHPLTGEIVTTSAAATKEDSIKAVESAAEAFTTWSKTGPSERRMILLTAADILEQRSDEFVKAMMEEVGAAAGWAHFNIFLTTQCLREAASLASHITGETIPTDRPGVFSMTVRQAAGVVFSMAPWNAPGVLGMRSIAYPLVCGNTVVFRASEGSPRSHQILAEVLHEAGLPAGALNFISNAPHDAAEISEAIIAHPAVRRVNFTGSTAVGRKIAEACGRHLKKPLLELGGKAPLVILDDADVDGAVNAAVFGAFMYQGQICMSTERIIIDNAVADEFIEKFTARVNELTAGDPRTDKKAAIGPMYRPDSGARINAMIDDALAKGAVVANGGKADGAAMAATVVDHVKPGMTIYTDETFGPITTIIRVNGVDEAIATANDSEYGLAAAVHGTDSTRTLDAALRIEAGHVHVNGATVQNDANAPFGGVKSSGYGHFDGRAVINEFTELKWVTIEPSDQKYPM
>NZ_CP046456.1|WP_156233080.1|83308_84808_+|MFS-transporter
MPSTPTRTSSQLWLVLGLPGNPTSSRSAPTSPNPKSSCSPLRSSRSKELMMTNLHLGVPPGATTQPIPVTRVVNDAKITPFHKQVFALCTLLMIVDGYDMISYGSVVQTLIIEWEMTTQQGGYLGAAALIGMLIGGMFVAPLADRFGRKTLLLGCLIASAAASLGCALSFNFETLFIARTLVGIALGAMVPNFVAMTGEFAPQRIRSFAVCFVCSVYSIGGIIAGLLGMFLIPNFGWNSVFWVSVSFIILAPVVWKFLPESPIFLSKLPARRTEFENVIARISPETDPSRVVAVEQPKEQATPIVEIFRKGNGLNTLLIWVVFLMTMLLSYGLNTWLPTLMTSAGYSLGSGLFNLVVLNIGGFLGAVLGGYLADRFNIKKVILAYFIVATLSLASLALTQNELLVNLLLVLAGATTVGTLSVIHALAAEYYPSAIRSTGIGWAAGIGRIGAIAGPVLGGALLGLALPFSQNFLAVAIPGIIGALAIAFVNMSKATKDQG
>NZ_CP046456.1|WP_156233133.1|81807_83412_+|benzoylformate-decarboxylase
MAPDSKRTVRSVVHDLMLKHGIFRIFGNPGSNELPFLTDLPEEIDYVLGLHEQAVVGMADGFAQASGEVAFVNLHAASGTGNAMGALTNSFYSRSPLVITAGQQVRETIGMHSFLSNVEAPQLTKPLTKWSCEPASASDVPRSFNEAVMQAQASAPGPVYLSIPYDDWEHEANANDELLLRRSYSEEHELSASAVEHLSGLISAAARPAIILGSAVDTVGANSAAITLAENTGADVYLAPSPYRLPFPNKHGQFRGVLPASIRAVNTTLAAYDLVLVIGAPVFRYHQHEPDHYLGEDVEFIHITDDPNEATRAPFGTAIVTDIKRALELLAEAVPPQETAIERPWQSYPATETPVDGIFDPARVFALLREHAPVDTSYVVESTSTNADFWSQMDLQEPASYFWPASGGLGFGLPAAVGVQMALTDRQVIGIIGDGSANYGITALWTAAQYDIPVIFIVLKNGTYGALRWFSQLLDTPDTPGMDVPDIDFLSLAQGYGVQAHAVDTDEDFIAALAGARASGKPHLIEVRTNLTQP
>NZ_CP046456.1|WP_156233078.1|80726_81701_-|LysR-family-transcriptional-regulator
MPQHRRVLYSMVKEVNLNLIRTFCLIYEHQGISRAADELHLSQPTVSYSLKQLRKAFSDQLFYRERGLLHPTPRAQQVYPDLRAALDLIATTEISSTEFGPDNSTREFVLMLSDLGEVVFLPSIQQLFEAKAPAARLRIEPLDVVKVPEKLTSGEIDAAIQTPRFYSDDVERTVIYRDIYVVIASVDHPRIQGSISLEQMSAERFIRIKSSIGHDAPENLLLEAGMQLHTGIIGTRVVSTPGVVMSSELLGIIPTAVIESLGWSDRIQILPNPINAEPMEVSLMSRVKQRRTRPQKWFVNLIEEAVGNMPSDVDGTAGPAPAAG
>NZ_CP046456.1|WP_156233076.1|77020_78361_+|hypothetical-protein
MGRYFLSNLLPCLIKEKSLRSRFLASVLAPVLLATSAVVVAPSAAAEPAPTYPLTIDSGSWDAGHIQGIAIDEKNGYVYHSFTEMLVKTDLQGNVIGTVEGFTGHLGDLDFNPEDGRVYGSLEYKDEESFYIAIFDVDKINKSGMDAEGSGIVSAVYLEEVVEDFTADMNGDGVFDGNIADTPDHRYGASGIDGVSFGPAFGNPAGEQKLMVAYGIYENNRRDDNNYQVILEYDTSEWSQYEKPLTQANPHQSGPADEDGKYFVPTGNTRYGVQNLSYDESSGLWYMGVYRGSKPEFPNYGLYVVDGVSQPELTELEGQPVEESGLVVPLADMGIVHPGTGITGFEDKADVGIEPIGDGYFYIAEDFDDVSSGEKRESATLHLMEWTGDTPLGFQKVPEGDAPALPQPDEEVPGLSSGKSFPGSSMSSSVFDALLQGSDGFSSSSF
>NZ_CP046456.1|WP_156233074.1|75188_76718_+|DASS-family-sodium-coupled-anion-symporter
MTAIITREAPQSQGIPKKRPYTARGLALAAGPALALLTFVLLPDSLAMEPRLLAGVAILMAVWWMTEAIPIPATSLLPVILFPVLGIAEVGPTAAPYANSIVFLILGGTLLGLGVQKWELHRRIALITISFFGTKPPQIIFGLMVSSAFISAWVSNTATAVIMIPIALSIIKLVNEASGRTNVKFAASALLGVAYAITIGGFATLIGQPVNPLLVAYLQETFDITISFGHWMLLGIPFSVIFLVAAWFVLTFLVYRVKSNIVEGGSELFRNELTSLGKTSQEEKKVIAVFLIAVFGWLILPFIARIPQVAEALPFLGRIEDASIAVFVGFLLFLIPTSSEGKAKSGDKSILVWKDAVDLPWGVLLLIGGGMALSTQITGTGLAAWIGEQMSGLGGLPPFAILMVVTLVLILITELTSNTATAAAFFPVMGALAVGIGIDPLLMTVVVSMAIMCAFMLPVATPSNAVAFATGELPIRQMVRTGIWMNMLGLIITAAATVTLVPLVFGVSL
>NZ_CP046456.1|WP_156233071.1|73791_74403_-|hypothetical-protein
MTQENPAMALYVILKKVVNSEARTVAAGWGSALGSAPNDKDFPQKHAEVVNLFAETQRYLLSLPEGNMDWEIYGKYLPSWYNAVIFRKLWDNTQYPAKSIINAAALDQLGGLGSLLGRTERAVLDDSSIENLKNGLEKWRELLDDSGISADVKEQIKAQVNHITWLLENMDTFGPNPVVREARNLAGLGFQLMSQLPSTIKKI
>NZ_CP046456.1|WP_156233069.1|73471_73771_-|hypothetical-protein
MSLTPETRSTCKYWKWLLSFCFGRAIAAAVAAVGLFLGGLHTGVDDLAGVLEGIHEVKVQYELLSNPVLELEAAPQENSAHDEQILDAEVVEEQQLPDE
>NZ_CP046456.1|WP_156233089.1|91402_92290_+|FAA-hydrolase-family-protein
MKISTLRLPTRTVAARQDGNTFTEISGFTDVGALLQNPDWQDLATAADGPTHDLTDTDLAPVVPRPGKIICVGVNYRQHIIEMGSEMPDHPTIFAKYAESLIGAEDDIQLPPEDSSLDWEGELAIIIGKPGRRIAEADALDHIAGYTVLNDVSMRGFQFRTMQWLQGKTWENSTPVGPAMVTPDELPADATLRTTIDGEVMQETTIDDLLFGAREIIAYLSTIFTLRPGDIIATGTPDGVGFARDPQRFLREGEVLETSIEGIGTLSNRVAAEILSTSKVPAAQGSHRTTPVMSS
>NZ_CP046456.1|WP_156233091.1|92446_93088_+|FCD-domain-containing-protein
MPASTSFASESLSERVKRIIVDRVIEGAYPPGTHLVELQLAEEFGVSQAPVREALRELSSTRLVENRPRRGTYVRSISPEELAEIYMVRVALEGTAAFHAFPTLHQDPSPLREALTRMREAVDAGSARGLAKYSTQFHRAIIEASGNRLMVEIWDSLFVEVRTMATIVRGQVDPRAAAESHAPIVEAFETGDAQLCQQLVAEHQQEYSILPHE
>NZ_CP046456.1|WP_156233093.1|93285_94149_+|DUF2437-domain-containing-protein
MKFITFRHDGTTRTGVLDTDTAEITPLANGEGLVDVIETWGNGTPEFSTTTLSLEEVELLAPIPRPRRNIFCIGRNYLEHAKEFADSGFDATASASHIPEHPVVFTKAPSTVIGTEAEIDPHLQLTDGLDYEAELGVIIGTGGRNITKDQAMNHVWGYTNINDVTARDMQKKHAQWFLGKSLDTHCPMGPWAVTRDEVGDEPLDLLCTVNGETRQQANTADLIFDIPTIIETISAGITLEPGDVIATGTPVGVGIGFKPPKFLAPGDVVEVSFSKLGTLRNQVGQGQ
>NZ_CP046456.1|WP_156233135.1|94201_95005_+|alpha/beta-fold-hydrolase
MPTAAHPAELTEVGTRKLFMEITGEGTDVVMVHGLGGATSFYDPIVTELSQQFRFLRYDFNGHGRSPLTGEISIDSLAQELAEVIRTQTTSGKAHVIGHSMGTLIVQQLATTHPELVDKIVLLGPVQAQPDKAKAATRQRAALVRDQGMSAVAEAISRGATADQAAEHNPLLRPLVRQLLLTQNAEAYAQACEALAAATNPDLHAITAPVLLITGDQDAVSTPETNDAIASELKNAQRHTISGIGHWTVLEAPDFVTDYLATFLQDT
>NZ_CP046456.1|WP_156233095.1|95135_96404_+|amidohydrolase-family-protein
MSKTIFKNVQILDSTGTQPYLGEVLVENERITEVSPGVGKINDPNALVIDGRGQTLMSGLTDAHTHFTWDNRPFDQLGNTPVEEHLLSTIDSAKTYLDYGYTMCFGAASAKARLDVVVRDAINAGRIPGPRYRANGMEIATTAGDLVDSITQTADGVEDMRKVVRATIGLGVDNIKMSISGEEVTGTRSAEDTYITEEELQVAVDEAHRRGVKVCTHARSRDSVYLSLKTGVDVIYHASYIDEQGMDMLEAAKDRVFVAPAINWLVATLEDAGQFGYSHEAAEQAGYAKELDVAVKGVQEMHRRGIRVLPGGDYGFAWTPHGTYARDLAHFVNLFGYTEMEAIIAATSLGGELFGQADELGKVQPGYYADMILVDGNPLEDITILQDIKKITAVMKNGEFHRRPHENMIIPKEAHEPAMATV
>NZ_CP046456.1|WP_156233097.1|97137_98208_-|restriction-endonuclease
MTAWVIRSGQYGERAEWAWEKGYSGAGWQAVGPELLSCKTREEVQSYAAEKYAHKPQALPNITAQLWMLLGRITIGDLIVMPIKQTREIALGWASTSLQYLHNEEDPSKRLVIGVNWVNRVPRTAVKQDLLYSLGATLTVFSPSRNQAEDRLKALLETGTDPGMRQESLEKAAAVLSSVAAGDTGNDPDVPAIQQDIEEMALDQISELISQEFTGHGLTRLIGDILRAEGFNVEESPEGPDGGIDIIAGRGLLGLESPKILVQVKTPKVDRPVVQQLTGLVSSHEADYGLIVAWGGLTSDARREVMSKRFRLKVWDDQDIIHAVLSNYEKLSSTTTQALPLKQIWVPGETADTALE
>NZ_CP046456.1|WP_156233099.1|98557_99112_-|hypothetical-protein
MDDGLFPAPAMATTVVVHTSRIPVIPDPDLPLTTAVQHRFWKHVVRGEGDRCWIWIGAISSPDGYGRFTWQKDRHRRTVSAHRVALMIAHGGELPQDLVGEHYCCEPLCVRVGDGHLRLTTQATNLARAVALGRHVSNRETVASHDRAQRSYRIRDAVLSGWDDDTLHAAQGGIPTPENQPGLW
>NZ_CP046456.1|WP_156233101.1|99137_99566_-|hypothetical-protein
MNARQRARLAVQVDQDKLKRQVDLFTEALTAVDVRDQAEIRLGRALNELRGMGLTRADIAQRTGLAPREVSAAMRAATEAETLEQEGETTTPEDTDLTASATPVEGADDTPESGDTGADQGVGNETELKTPEARSVDPAPAQ
>NZ_CP046456.1|WP_156233103.1|104100_104688_+|AAA-family-ATPase
MIIGIVNVKGGVGKTTSAIYLGTALAQMGRDVTVIDMDHQGSASDWADRAADAGTPLPFPVEISNAKRLGRYVKSLPRDMVVILDTPPGDPQTIDSAVSVSDFVLVPTRSSGIETSRVWDTLPSLEGIPHAVLITSARLGTKSLDLLLAILDEEEVPRFRSVIPLRESVPASWGNVPDRLEGYDSVGREIVETIK
>NZ_CP046456.1|WP_156233105.1|104684_104921_+|hypothetical-protein
MNTKKHNLGPSKPRQRRSISEAFIDTEAAAKPEASTMFNVRMTTSVHRRLKFQAFKEDRTMKEIVEESVLKYLNEHES

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP046456_1	1.1|90577|48|NZ_CP046456|CRISPRCasFinder	90577-90624	48	NZ_CP046456	Corynebacterium sp. 2039 plasmid pCOCCU, complete sequence	90577-90624	0	1.0

1. spacer 1.1|90577|48|NZ_CP046456|CRISPRCasFinder matches to NZ_CP046456 (Corynebacterium sp. 2039 plasmid pCOCCU, complete sequence) position: , mismatch: 0, identity: 1.0

ccactcaagtgatgttgctcaccagtcgggggtaaggtgatacacccc	CRISPR spacer
ccactcaagtgatgttgctcaccagtcgggggtaaggtgatacacccc	Protospacer
************************************************