CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP045870	Klebsiella aerogenes strain Y1 chromosome, complete genome	4 crisprs	WYL,cas3,DinG,DEDDh,cas14j,csa3	1	1	8	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP045870_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045870_1

939776-939850

Orphan

Consensus_repeat	Method
CGGGTAAGGCGTTAGCCGCCACCCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045870_1

>merge|NZ_CP045870|1|939776-939850|CRISPRCasFinder
CGGGTAAGGCGTTAGCCGCCACCCGACAAAAAAACGGCACCGCGGGTAGCCCGGGTAAGGCGTAGCCGCCACCCG

>NZ_CP045870|1|1|939776-939850|CRISPRCasFinder
CGGGTAAGGCGTTAGCCGCCACCCG	ACAAAAAAACGGCACCGCGGGTAGC
CCGGGTAAGGCGTAGCCGCCACCCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045870.1\|WP_015367575.1\|948844_948970_+\|manganase-accumulation-protein-MntS	unknown	unknown	gnl\|CDD\|380222
NZ_CP045870.1\|WP_020079297.1\|934192_935266_-\|LacI-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224525
NZ_CP045870.1\|WP_015367574.1\|948190_948658_-\|manganese-binding-transcriptional-regulator-MntR	unknown	unknown	gnl\|CDD\|182927
NZ_CP045870.1\|WP_015704826.1\|945933_946974_-\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381317
NZ_CP045870.1\|WP_015704831.1\|935562_936864_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340877
NZ_CP045870.1\|WP_032707650.1\|949238_950816_+\|phosphoethanolamine-transferase	unknown	unknown	gnl\|CDD\|225105
NZ_CP045870.1\|WP_015367567.1\|939865_941458_-\|ABC-F-family-ATPase	unknown	unknown	gnl\|CDD\|237894
NZ_CP045870.1\|WP_032707658.1\|931975_932791_+\|HAD-family-hydrolase	unknown	unknown	gnl\|CDD\|272905
NZ_CP045870.1\|WP_015704829.1\|941637_942420_+\|tyrosine-protein-phosphatase	unknown	unknown	gnl\|CDD\|379135
NZ_CP045870.1\|WP_032707661.1\|927578_928334_+\|molybdopterin-synthase-adenylyltransferase-MoeB	unknown	unknown	gnl\|CDD\|180204
NZ_CP045870.1\|WP_032707652.1\|947081_948194_-\|anion-transporter	unknown	unknown	gnl\|CDD\|238537
NZ_CP045870.1\|WP_015367561.1\|929392_931825_+\|formate-C-acetyltransferase/glycerol-dehydratase-family-glycyl-radical-enzyme	unknown	unknown	gnl\|CDD\|273798
NZ_CP045870.1\|WP_015704827.1\|944401_945778_-\|glycoside-hydrolase-family-1-protein	unknown	unknown	gnl\|CDD\|225343
NZ_CP045870.1\|WP_032707664.1\|926343_927579_+\|molybdopterin-molybdotransferase-MoeA	unknown	unknown	gnl\|CDD\|182643
NZ_CP045870.1\|WP_032707666.1\|925222_926164_-\|beta-aspartyl-peptidase	unknown	unknown	gnl\|CDD\|182319
NZ_CP045870.1\|WP_032707656.1\|932930_934196_+\|DUF1479-domain-containing-protein	unknown	unknown	gnl\|CDD\|369327
NZ_CP045870.1\|WP_015704828.1\|943624_944341_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225099
NZ_CP045870.1\|WP_032707653.1\|936879_939243_+\|glycoside-hydrolase-family-31-protein	unknown	unknown	gnl\|CDD\|224418
NZ_CP045870.1\|WP_015367569.1\|942618_943533_+\|L,D-transpeptidase	unknown	unknown	gnl\|CDD\|182341
NZ_CP045870.1\|WP_032707659.1\|928489_929389_+\|glycyl-radical-enzyme-activating-protein	unknown	unknown	gnl\|CDD\|274163

Protein	Function_ID	Function_description	E-value
NZ_CP045870.1\|WP_015367575.1\|948844_948970_+\|manganase-accumulation-protein-MntS	gnl\|CDD\|380222	NF033226, small_MntS, manganase accumulation protein MntS. Members of this family are MntS, a small protein of about 42 amino acids that seems to play assist bacteria in accumulating manganese when iron is limiting. It may function as a manganese chaperone, or may inhibit manganese efflux transporters.	8.63856e-23
NZ_CP045870.1\|WP_020079297.1\|934192_935266_-\|LacI-family-transcriptional-regulator	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	8.79663e-60
NZ_CP045870.1\|WP_015367574.1\|948190_948658_-\|manganese-binding-transcriptional-regulator-MntR	gnl\|CDD\|182927	PRK11050, PRK11050, manganese-binding transcriptional regulator MntR.	4.05373e-90
NZ_CP045870.1\|WP_015704826.1\|945933_946974_-\|aldo/keto-reductase	gnl\|CDD\|381317	cd19091, AKR_PsAKR, Polaromonas Sp. aldo-keto reductase and similar proteins. The prototype of this family is an uncharacterized aldo-keto reductase from Polaromonas sp.	0
NZ_CP045870.1\|WP_015704831.1\|935562_936864_+\|MFS-transporter	gnl\|CDD\|340877	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily. This family is composed of predominantly bacterial transporters for hexuronate (ExuT), glucarate (GudP), galactarate (GarP), and galactonate (DgoT). They mediate the uptake of these compounds into the cell. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.66786e-74
NZ_CP045870.1\|WP_032707650.1\|949238_950816_+\|phosphoethanolamine-transferase	gnl\|CDD\|225105	COG2194, COG2194, Predicted membrane-associated, metal-dependent hydrolase [General function prediction only].	4.61023e-111
NZ_CP045870.1\|WP_015367567.1\|939865_941458_-\|ABC-F-family-ATPase	gnl\|CDD\|237894	PRK15064, PRK15064, ABC transporter ATP-binding protein; Provisional.	0
NZ_CP045870.1\|WP_032707658.1\|931975_932791_+\|HAD-family-hydrolase	gnl\|CDD\|272905	TIGR00099, Uncharacterized_protein_MCAP_0867, Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. This subfamily of sequences falls within the Class-IIB subfamily (TIGR01484) of the Haloacid Dehalogenase superfamily of aspartate-nucleophile hydrolases. The use of the name "Cof" as an identifier here is arbitrary and refers to the E. coli Cof protein. This subfamily is notable for the large number of recent paralogs in many species. Listeria, for instance, has 12, Clostridium, Lactococcus and Streptococcus pneumoniae have 8 each, Enterococcus and Salmonella have 7 each, and Bacillus subtilus, Mycoplasma, Staphylococcus and E. coli have 6 each. This high degree of gene duplication is limited to the gamma proteobacteria and low-GC gram positive lineages. The profusion of genes in this subfamily is not coupled with a high degree of divergence, so it is impossible to determine an accurate phylogeny at the equivalog level. Considering the relationship of this subfamily to the other known members of the HAD-IIB subfamily (TIGR01484), sucrose and trehalose phosphatases and phosphomannomutase, it seems a reasonable hypothesis that these enzymes act on phosphorylated sugars. Possibly the diversification of genes in this subfamily represents the diverse sugars and polysaccharides that various bacteria find in their biological niches. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. [Unknown function, Enzymes of unknown specificity].	4.36864e-67
NZ_CP045870.1\|WP_015704829.1\|941637_942420_+\|tyrosine-protein-phosphatase	gnl\|CDD\|379135	pfam13350, Y_phosphatase3, Tyrosine phosphatase family. This family is closely related to the pfam00102 and pfam00782 families.	1.80456e-72
NZ_CP045870.1\|WP_032707661.1\|927578_928334_+\|molybdopterin-synthase-adenylyltransferase-MoeB	gnl\|CDD\|180204	PRK05690, PRK05690, molybdopterin biosynthesis protein MoeB; Provisional.	0
NZ_CP045870.1\|WP_032707652.1\|947081_948194_-\|anion-transporter	gnl\|CDD\|238537	cd01117, YbiR_permease, Putative anion permease YbiR. Based on sequence similarity, YbiR proteins are predicted to function as anion translocating permeases in eubacteria, archaea and plants. They belong to ArsB/NhaD superfamily of permeases that have been shown to translocate sodium, sulfate, arsenite and organic anions. A typical ArsB/NhaD permease is composed of 8-13 transmembrane domains.	1.49792e-91
NZ_CP045870.1\|WP_015367561.1\|929392_931825_+\|formate-C-acetyltransferase/glycerol-dehydratase-family-glycyl-radical-enzyme	gnl\|CDD\|273798	TIGR01774, Putative_formate_acetyltransferase_3, glycyl radical enzyme, PFL2/glycerol dehydratase family. This family previously was designated pyruvate formate-lyase, but it now appears that members include the B12-independent glycerol dehydratase. Therefore, the functional definition of the family is being broadened. This family includes the PflF and PflD proteins of E. coli, described as isoforms of pyruvate-formate lyase found in a limited number additional species. PFL catalyzes the reaction pyruvate + CoA -> acetyl-CoA + formate, which is a step in the fermentation of glucose.	0
NZ_CP045870.1\|WP_015704827.1\|944401_945778_-\|glycoside-hydrolase-family-1-protein	gnl\|CDD\|225343	COG2723, BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism].	2.47116e-157
NZ_CP045870.1\|WP_032707664.1\|926343_927579_+\|molybdopterin-molybdotransferase-MoeA	gnl\|CDD\|182643	PRK10680, PRK10680, molybdopterin biosynthesis protein MoeA; Provisional.	0
NZ_CP045870.1\|WP_032707666.1\|925222_926164_-\|beta-aspartyl-peptidase	gnl\|CDD\|182319	PRK10226, PRK10226, isoaspartyl peptidase; Provisional.	0
NZ_CP045870.1\|WP_032707656.1\|932930_934196_+\|DUF1479-domain-containing-protein	gnl\|CDD\|369327	pfam07350, DUF1479, Protein of unknown function (DUF1479). This family consists of several hypothetical Enterobacterial proteins, of around 420 residues in length. Members of this family are often known as YbiU. The function of this family is unknown.	0
NZ_CP045870.1\|WP_015704828.1\|943624_944341_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|225099	COG2188, PhnF, Transcriptional regulators [Transcription].	8.89255e-64
NZ_CP045870.1\|WP_032707653.1\|936879_939243_+\|glycoside-hydrolase-family-31-protein	gnl\|CDD\|224418	COG1501, COG1501, Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism].	0
NZ_CP045870.1\|WP_015367569.1\|942618_943533_+\|L,D-transpeptidase	gnl\|CDD\|182341	PRK10260, PRK10260, L,D-transpeptidase; Provisional.	0
NZ_CP045870.1\|WP_032707659.1\|928489_929389_+\|glycyl-radical-enzyme-activating-protein	gnl\|CDD\|274163	TIGR02494, PFLE_PFLC, glycyl-radical enzyme activating protein. This subset of the radical-SAM family (pfam04055) includes a number of probable activating proteins acting on different enzymes all requiring an amino-acid-centered radical. The closest relatives to this family are the pyruvate-formate lyase activating enzyme (PflA, 1.97.1.4, TIGR02493) and the anaerobic ribonucleotide reductase activating enzyme (TIGR02491). Included within this subfamily are activators of hydroxyphenyl acetate decarboxylase (HdpA), benzylsuccinate synthase (BssD), gycerol dehydratase (DhaB2) as well as enzymes annotated in E. coli as activators of different isozymes of pyruvate-formate lyase (PFLC and PFLE) however, these appear to lack characterization and may activate enzymes with distinctive functions. Most of the sequence-level variability between these forms is concentrated within an N-terminal domain which follows a conserved group of three cysteines and contains a variable pattern of 0 to 8 additional cysteines.	5.00465e-138

>NZ_CP045870.1|WP_032707653.1|936879_939243_+|glycoside-hydrolase-family-31-protein
MKTLKHWSLHQQLEHHVELTVDGQHTLCLYVLEENLFRVLLKRQGQLALDRTWSIAPQQDVPWEGRARDDLSGFSLPAWQMSEADDTLTIATRQLRVTVHQPLWLEWSYRDEAGEWQTLANDRPTSAYLANAHGDGVAHYLSRRKDERYYGLGEKAGDLQRNGKRYEMRNLDAMGYNAVSTDPLYKHIPFTITQRSDISYGLFYDNLSSCWLDLGNEIDNYHTAYRRWQAEAGDIDYYLFTGKQVLDVTKAFVRLTGKTLFGPKWSLGYSGSTMHYTDAPDAQNQLMNFIRLCEQHAIPCDSFQLSSGYTSINGKRYVFNWNYDKVPQPKVMSQSFHDAGLKLAANIKPCLLQDHPRYGEVAERGLFIRDSQTDAPERSSFWDDEGSHLDFTNPHTVTWWQEGVTTQLLEMGIDSTWNDNNEYEVWDGEARCYGFGREIAIKHIRPVMPLLMMRASLEAQQRFAPQKRPYLISRSGCAGMQRYVQTWSGDNRTNWDTLRYNTRMGLGMSLSGLFNVGHDVGGFSGDKPEPELFVRWVQNGVMHPRFTIHSWNDDQTVNEPWMYPEITPAIRSAIELRYRLLPYLYTLLWQAHADDEPMLRPTFLDHQHDTQTFAECDDFMLGRDLLVASVVEPGARQRQLWLPDNQDGWYDFYSHQWFAGGQWVTLDAPLEKLPLLVRAGAGLPLSERINHVDAQKDDRRELQLFPLKGTGSTRGLLFEDDGESWGYKEGDALWLEWEMTCSANSINLKLDACGNYRPAWKALKLSLPAGEKRQLLVNGVEGTEWRL
>NZ_CP045870.1|WP_015704831.1|935562_936864_+|MFS-transporter
MSQGLNNDMAVSKTRRVVKNLRWWVLVLFLLGVTVNYITRNSLGIIAPELKATLGITTEQYSWIVGAFQLAYTIFQPLCGWLIDVIGLKLGFMVCATLWAVACIAHAGAGSWLHLAILRFFMGGAEAAATPANAKTIGEWFPKSERPIAAGWAGVGFSIGAMLAPPIIYFAHASFGWQGAFMFTGVLALLWVVLWWAFYQSPEKHPNLSQSELEYIKQDNEAPPVKQPFFTALKTVSKNKRFYGIAIPAFMAEPAWAVLSFWVPLYLAKEHGMDLKQIAMFAWLPFLAADLGSVVSGYLTRLYVRWFGCTRVNSVIASSVTGAFLMLSLALVAITRDPYITIILISIGGFGHQIISCMLSALVVESFDKGQMATVNGMRGSAAWIASFLFSLLIGVTADKIGFNPLFIAMGFFDLIGAVFLVAFIAERRAKRA
>NZ_CP045870.1|WP_020079297.1|934192_935266_-|LacI-family-transcriptional-regulator
MDKKLRVAEIAARTGLSASTVSRVLAGKANTSEKARQAVLACARELGVMQGLAAGRLLLNNLLIFAPQRAFDERSDIFYYRVIQSINNALAPHEVRLRYCALEENDSDANLFLARMNETDTQAAVLLGIDDRHIHALAADLGKPCVLINCRDEGMRLPSIAPDHRLIGQCAARYLFDMGHQAVMNVMCLRRYTMELRLVGIKEAWRARNLRFTGSRDLISVANFSARETEEQVGAWLDALQGRPMPTAFLVGGDFMAAGTVSALQKRGLRVPQDVSVMSIDGFNLAAIQDVPLTAIHVPRDELGSEAVHLLQQRLLRPEAPHGSLLLHGALVVRDSVRRIRPGKSHTAVEQQGLYDD
>NZ_CP045870.1|WP_032707656.1|932930_934196_+|DUF1479-domain-containing-protein
MAALPTHETLPADHKAAIRQMKQALRAQIGDVQAVFDKLSARISERLDEINALKAAGKEVWPTIPFSDIAQGKVSDAQREAIKRRGCAVIKGHYPREQALAWDNAMLEYLDLNHFDDVYKGPGDSFFGSLEASRPEIYPIYWSPSQMQARQSDEMAAVQSFLNRLWRFEQDGKRWFDPDVSVIYPDRIRRRPPGTTSKGLGAHTDSGALERWLLPAYQQVFANVFNGNIDAYDPWDAAHRTEVEEYTVDNTTKCSVFRTFQGWTALSDMIPGQGLLHVVPIPEAMAYVLLRPLLDDVPEDELCGVAPGKVLPISEQWHPLLIKALSSIPALNAGDSVWWHCDVIHSVAPVENQQGWGNVMYIPAAPMCEKNLAYAQKVKIALEKGASPGDFPREDYECDWQARFTVADLNDHGKRALGMKI
>NZ_CP045870.1|WP_032707658.1|931975_932791_+|HAD-family-hydrolase
MTVKVIVTDMDGTFLNDAKQYDRPRFLAQFAQLKQQGIEFVVASGNQYYQLISFFPEIREQISFVAENGALVYEHGKQVFHGELTRHESQVVIGELLKDPQLNFVACGLQSAYVSDKAPDAFVELMSKHYHRLQRVSDYHRIDDTLFKFSLNLPDSDIPQLIDKLHVSLDGIMKPVTSGFGFVDLIIPGLHKANGISRLLKRWNLSPQQCVAIGDSGNDAEMLKLVKYAFAMANAADSIKAIAGFTTDDNNHDGALKVIQAVLDKTAPFND
>NZ_CP045870.1|WP_015367561.1|929392_931825_+|formate-C-acetyltransferase/glycerol-dehydratase-family-glycyl-radical-enzyme
MTTLKLDTLSARIQAHKMALVHIVKPPVCTERAQHYTAAYQQHLDKPIPVRRALALAHHLAERTIWIKHDELIVGNQASEVRAAPIFPEYTVSWIEKEIDDLADRPGAGFSVSEANKRVLHEVCPWWRGQTVQDRCYGMFTDEQKALLATGIIKAEGNMTSGDAHLAVNYPLLLEKGLDGMRAKVAERRSRINLTVLEDLHGEQFLKAIDIVLAAVSEHCKRFATLARDMAAQEPRELRRNELLAIAENCEIIAHQPPKTFWQALQLCYFIQLILQIESNGHSVSFGRMDQYLYPYYRRDVELQQSLDREQAIELLHCCWLKLLEVNKIRSGSHSKASAGSPLYQNVTIGGQNLVDGQPQDAVNPLSYAILESCGRLRSTQPNLSVRYHAGMSNDFLDACVQVIRCGFGMPAFNNDEIVIPEFIKLGIEPQDAYDYAAIGCIETAVGGKWGYRCTGMSFINFARVMLATLEGGRDATSGQVFLAQQHALSKGNFANFDQVLEDWDTQIRYYTRKSIEIEYVVDTMLEENVHDILCSALVDDCIERAKSIKQGGAKYDWVSGLQVGIANLGNSLAAVKKLVFDQGVIGQQELAKALAEDFAGLTHEQLRQRLINGAPKYGNDDDSVDILLARAYQTYIDELKQYHNPRYGRGPIGGNYYAGTSSISANVPFGAQTMATPDGRKAHAPLAEGASPASGTDHLGPTAVISSVGKLPTGAILGGVLLNQKLNPSTLENESDKQKLMVLLRTFFEVHKGWHIQYNIVSRETLLEAKKHPDQYRDLVVRVAGYSAFFTALSPDTQDDIIARTEHTL
>NZ_CP045870.1|WP_032707659.1|928489_929389_+|glycyl-radical-enzyme-activating-protein
MIFNIQRYSTHDGPGIRTVVFLKGCSLGCRWCQNPESRARSEDLLYDARLCLDGCELCQQAAPEVITRTLDGLIIHRQNVNDAHIAALRHCCPTTALTVCGEEKSVAEIMATVLRDKPFYDRSGGGITLSGGEPFMNPTLAQALFEASHQAGIHTAVETCLHVPWKYIEPSLPFVDLFLADLKHVDEAVFQQWTDGSARRVLDNLQRLAQAGKKIIIRVPLIQGFNASEADITAITDFAADRLQVSEIHFLPYHTLGMNKYQLLSQPYTAPDKPLAAPELLAFAQQYAQSKGLTATLRG
>NZ_CP045870.1|WP_032707661.1|927578_928334_+|molybdopterin-synthase-adenylyltransferase-MoeB
MAVELSDEEMLRYNRQIVLRGFDFDGQERLKAARVLVVGLGGLGCAAAQYLAAAGVGQLTLVDFDTVSLSNLQRQTLHSDATIGQPKVDSARDALARINPHVRLVTIDAMLDDAALATQIADHHLVLDCTDNVAVRNQLNAGCFQHKTPLVSGAAIRMEGQISVFTYQDGEPCYRCLSRLFGENALTCVEAGVMAPLVGTIGSLQAMEAIKLLTGYGTPARGKIVMYDAMTCQFREMKLMRHPQCEVCGSR
>NZ_CP045870.1|WP_032707664.1|926343_927579_+|molybdopterin-molybdotransferase-MoeA
MDFTAGLMPLDTALTQMLDRISPLQATETLPLLQAFSRVTAHDVVSPLDVPGFDNSAMDGYAVRLADLTDGAALPVAGKAFAGQPFHDAWPAGTCIRIMTGAPVPERCDAVVMQEETEQSDAGVRFIAPVKAGQNIRRRGEDIANGAVVFPAGTRLTVAELPVLASLGIADVEVVRKVRVAVFSTGDELQLPGQPLGDGQIYDTNRLAVHLMLEQLGCEVINLGIIPDDPAKLRDAFIAADQQADVVISSGGVSVGEADYTKTILEELGEIGFWKLAIKPGKPFAFGKLSNSWFCGLPGNPVSATLTFYQLVQPLLAKLSGNRGQTQPMRLRVRAASRLKKSPGRLDFQRGVLQRNPEGELVVSTTGHQGSHIFSSFSLGNCFIVLERERGNVEAGEWVEVEPFNHLFGGL
>NZ_CP045870.1|WP_032707666.1|925222_926164_-|beta-aspartyl-peptidase
MGKAVIAIHGGAGAISRAQMTQARESEYVAALSAIVDSGQKMLAAGASALDAVTEAVRLLEECPLFNAGIGSVFTHDQTHELDACVMDGYSLQAGAVAGVKHLRNPVLAARLVLEESPHVLLIGEGAEKFAASRGMALVENELFSTTERLLQLQQAKEGGEIILDHHAAPLDERHKMGTVGAVALDLAGNLAAATSTGGMTNKLPGRVGDSPVPGAGCYANNASVAVSCTGTGEVFMRTLAAYDISALMEYGNLSLFEACERVVQEKLPALGGSGGLIAIDREGNVVLPFNSEGMYRAWCYAGDTPTIGIYRE
>NZ_CP045870.1|WP_015367567.1|939865_941458_-|ABC-F-family-ATPase
MLVSSNVTMQFGSKPLFENISVKFGGGNRYGLIGANGSGKSTFMKILGGDLEPTLGNVSLDPNERIGKLRQDQFAFEEFTVLDTVIMGHGELWEVKQERDRIYALPEMSEEDGYKVADLEVKYGEMDGYSAEARAGELLLGVGIPVEQHYGPMSEVAPGWKLRVLLAQALFSNPDILLLDEPTNNLDIDTIRWLEQVLNERDSTMIIISHDRHFLNMVCTHMADLDYGELRVYPGNYDEYMTAATQARERLLADNAKKKAQIADLQAFVSRFSANASKSRQATSRARQIDKIKLDEVKASSRQNPFIRFEQDKKLFRNALEVEALAKGFDNGPLFKGVNLLLEVGEKLAVLGTNGVGKSTMLKTLVGELEADNGTVKWSENARIGYYAQDHAEDFENDLTVFDWMSQWKQEGDDEQAVRSILGRLLFSQDDIKKPAKVLSGGEKGRMLFGKLMMQKPNILVMDEPTNHLDMESIESLNMALEMYQGTLIFVSHDREFVSSLATRVLEITPERVIDFSGNYEDYLRSKGIE
>NZ_CP045870.1|WP_015704829.1|941637_942420_+|tyrosine-protein-phosphatase
MTTRTSHPAFISLQGGINFRDLGGQRAADGRRVRSGKLLRSGSLHNMTPEDLNHLSAIPLSRVLDYRDPTEVNRSPDRLNSEAFYLNAPANPLSSSVNAKVTEFNAATLNTMDGEQFMLQLYRQLPFNNAAYRQLTQWLMEPFDGALLQHCAVGKDRTGVGCALTLFALGCDSNTVMEEYLLTQGMLAQVEGFLLDTFGEGLNEHGRKNLAAIMTVQESYLATALSSIEQRYGHVDRWLEQEYRLTPQAREALQSRLLED
>NZ_CP045870.1|WP_015367569.1|942618_943533_+|L,D-transpeptidase
MKLSTLLAAAFAIVGFCNTASAVTYPLPTDGSRLIGQNQVITIPDDNKQPLEYFAAKYQMGLSNMLEANPGVDTYLPKGGTVLNIPQQLILPDTVHEGIVINSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAEYAAEGNPLPAVVPAGPDNPMGLYALYIGRLYAIHGTNANFGIGLRVSHGCVRLRNEDIKFLFENVPVGTRVQFIDEPVKATTEPDGSRYVEVHNPLSTTEAQFKGGEIVPISLTQAVQSVTSQPDVDQSVMDQAIQNRSGMPVRLN
>NZ_CP045870.1|WP_015704828.1|943624_944341_-|GntR-family-transcriptional-regulator
MTAKYLNIAREIKKRIISQQYPASAPLPDQFALAAEFNTSRMTIQQAMRQLIVEGLIYTRKGQGTFVRKNFLQLSQWELPGSDYFGATKTWEHLGEVQSEVVRFELRFPSEKEQSSLLIDADAPVYDFVRLRLLNGEPISLDLTVMPVALVPGLNKSHLQSSVFRYVQETLGLKLMGSYRVVRAIKPDELDKLHLNCEPTDPVLEVEQVIYLEDGTPLEYAHCHYRYDHGGVILVNNG
>NZ_CP045870.1|WP_015704827.1|944401_945778_-|glycoside-hydrolase-family-1-protein
MKDKLPANFLWGNSVSSMQTEGAWNEGGKGMSVYDIREPSEFASDWKVATDSYHRFREDFDLMQDLGMNCYRFQIAWSRVCPQGDGEFNEEGIAFYHQFIDELIARGIEPMICLYHFDMPLSLAERYNGFTDRRVMDAFIRYGQKMIDCYGDKVKYWLTFNEQNLYHSPEAFLITGYLRGDKTLRELYQIQHHVMMAHVHLTDYLHQAKPQCLMGGMLAHALVYPATCKPRDILCAQQLDEFLNQNLLRAYAGEGYSPEVMHFVAREGFDDIYRPEDIALMARVKVDYLAFSYYASRTLNSDAIPPGTAVNNYMLFGNQDNPYLKATEWNWQIDPLGFRTIITRYYNDWRLPVFPIENGIGVIESWDGENQVADDYRIAYHRDHINAMKAAMFEDGAQVIGYLGWGLIDILSSQGDMRKRYGVVYVNRENHDLKDLKRVPKKSYAWLKRVIHSNGEEM
>NZ_CP045870.1|WP_015704826.1|945933_946974_-|aldo/keto-reductase
MRYQKLGNTGLFVSELCLGTMTFGGEEGMWGKIGQLRQAEAEQLVGSALDAGINFIDTANVYSEGRSEEITGQALKNLKIPRENVVVATKVFGETGTAGVNSRGSSRYHIMGSVKESLRRLQLDHIDLYQLHGFDPATPIEETLSALDTLVQQGHVRYIGVSNWAAWQIAKALGIAERLGLSRFASLQAYYTIAGRELERELVPMMQSEGLGLMVWSPLAGGLLSGKYRRDGQAEAGGRRLEFDFPPVNKDRAFDCIDVMQVIAEAKGVSVAQIALAWLLHQPAVTSVIIGAKRAEQLQDNIAATAIRLSEDELRQLDAVSALPREYPGWMLERQGEYRRKQLDAQ
>NZ_CP045870.1|WP_032707652.1|947081_948194_-|anion-transporter
MNLPLVQSLARDRFLHLLLLIAVILSLFVPFAPQRWGQAIDWHTIITLSGLMLLTKGIELSGYFDVLGRKMARRFVTERQLAIFMVLAAALLSTFLTNDVALFIVVPLTLTLKKWCAIPVNRLIIFEALAVNAGSLLTPIGNPQNILLWGRSGLSFLAFIGQMLPLAAAMMITLLVLCWFCFPAARLNYQSSDKAPEWRPRLVWSCLAFYLIFLAALEMKQELWGLSIIAVGFLLLARAVIINVDWSLLLVFMAMFIDVHLLTQLPVLQQWLNDVGQLSHGGLWLTAIGLSQFISNVPSTILLLNYVPPTMLLAWAVNVGGFGLLPGSLANLIALRMAGDRRIWWRFHLYSIPLLIWAALTGYAMLALWR
>NZ_CP045870.1|WP_015367574.1|948190_948658_-|manganese-binding-transcriptional-regulator-MntR
MNRRAGKPITKKVTQLVNVEEHVEGFRQVREAHRRELIDDYVELISDLINEVGEARQVDMAARLGVSQPTVAKMLKRLASVGLIEQIPWRGIFLTPEGEKLAHESRERHQIVENFLLAIGVSPEIARRDAEGMEHHVSEETLAQFKLFTQRLHAE
>NZ_CP045870.1|WP_015367575.1|948844_948970_+|manganase-accumulation-protein-MntS
MNEFKRCLNVFSHSPFKVRLMLIGMLCDMINGKPQQDKPNH
>NZ_CP045870.1|WP_032707650.1|949238_950816_+|phosphoethanolamine-transferase
MNVTLKETLAARRLALNPWTGFYFLQSLLINLALGYEFSLLYTVAFTCVLHLLWRTFPRVQKGVVGLYSLLAAMYYPFGQAYGAPNFNTLLALHATNVEESTEILTIFPWYNYLLAVFIFALGVIAVRRKPQPPARLGKVEYLGLLFSIGIFFLQPVQNLAWGGVFKVIDSGYPAVRFVKDVIVNNNEVLDEQARMAQLANMKDSWHVLAVKPKYHLYVVVIGESARRDALGAFGGHWDNTPFASSVNGYLFKNYVAASGSTQKSLGLTLNRVVDGKPQYQDNFVTLANRAGFQTWWFSNQGQIGEYDTAIASIAKRADEVQFLKNGDFEANKNTQDEQLLKLTEQVLSVERSQPQLIVLHIMGSHPQACDRTKGKYTTFVQSKETSCYLYSVTQTDALLAKLYGQLQNSGSSFSLTYFSDHGLAFKERGKAVQYLAHDDKYQQNFQVPFMVLSSDDKAHKMIKARRSANDFLSFFSQWTGISAQEITPRYRFISEQKAGPVYITNFQLQKVDYNHLGSDEFTVN

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Crispr_ID: NZ_CP045870_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045870_2

1872182-1872300

Orphan

Consensus_repeat	Method
TCCCGGGGGACGGCGCTTCGCGCCTTACCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045870_2

>merge|NZ_CP045870|2|1872182-1872300|CRISPRCasFinder
TCCCGGGGGACGGCGCTTCGCGCCTTACCCGGGCTACACAACCCGCAACGTTCGGTAGCCCGGCTAAGCGTAGCGCAAGCCGGGGGATGTCCCGGGGGACGGCGCTTCGCGCCTTACCC

>NZ_CP045870|2|2|1872182-1872300|CRISPRCasFinder
TCCCGGGGGACGGCGCTTCGCGCCTTACCC	GGGCTACACAACCCGCAACGTTCGGTAGCCCGGCTAAGCGTAGCGCAAGCCGGGGGATG
TCCCGGGGGACGGCGCTTCGCGCCTTACCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045870.1\|WP_032709826.1\|1864281_1864815_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP045870.1\|WP_032709816.1\|1874939_1876544_-\|aldehyde-dehydrogenase-(NADP(+))	unknown	unknown	gnl\|CDD\|143447
NZ_CP045870.1\|WP_023288208.1\|1878765_1879713_+\|4-hydroxyproline-epimerase	unknown	unknown	gnl\|CDD\|172473
NZ_CP045870.1\|WP_032709815.1\|1876558_1877479_-\|dihydrodipicolinate-synthase-family-protein	unknown	unknown	gnl\|CDD\|188630
NZ_CP045870.1\|WP_032709821.1\|1866354_1867227_-\|2-dehydro-3-deoxygalactonokinase	unknown	unknown	gnl\|CDD\|377446
NZ_CP045870.1\|WP_032709818.1\|1870954_1872175_+\|amino-acid-deaminase	unknown	unknown	gnl\|CDD\|143492
NZ_CP045870.1\|WP_032709823.1\|1865768_1866368_-\|2-dehydro-3-deoxy-6-phosphogalactonate-aldolase	unknown	unknown	gnl\|CDD\|181670
NZ_CP045870.1\|WP_032709813.1\|1879709_1880819_+\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223737
NZ_CP045870.1\|WP_032709809.1\|1883682_1884447_+\|2-hydroxyhepta-2,4-diene-1,7-dioate-isomerase	unknown	unknown	gnl\|CDD\|185125
NZ_CP045870.1\|WP_015368415.1\|1868911_1869304_-\|RidA-family-protein	unknown	unknown	gnl\|CDD\|100004
NZ_CP045870.1\|WP_020079694.1\|1880815_1881079_+\|(2Fe-2S)-binding-protein	unknown	unknown	gnl\|CDD\|379229
NZ_CP045870.1\|WP_032709824.1\|1864908_1865772_+\|MurR/RpiR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224651
NZ_CP045870.1\|WP_015368421.1\|1877630_1878455_-\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NZ_CP045870.1\|WP_015704301.1\|1873322_1874924_-\|APC-family-permease	unknown	unknown	gnl\|CDD\|223605
NZ_CP045870.1\|WP_015368409.1\|1863433_1864249_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|181904
NZ_CP045870.1\|WP_032709820.1\|1867236_1868724_-\|sodium:solute-symporter-family-protein	unknown	unknown	gnl\|CDD\|271357
NZ_CP045870.1\|WP_032709810.1\|1883053_1883686_+\|2-hydroxyhepta-2,4-diene-1,7-dioate-isomerase	unknown	unknown	gnl\|CDD\|185125
NZ_CP045870.1\|WP_032709819.1\|1869314_1870754_-\|D-aminoacylase	unknown	unknown	gnl\|CDD\|238622
NZ_CP045870.1\|WP_032709812.1\|1881059_1882322_+\|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|223523
NZ_CP045870.1\|WP_155961168.1\|1861114_1863406_+\|phosphatidylglycerol--membrane-oligosaccharide-glycerophosphotransferase	unknown	unknown	gnl\|CDD\|179648

Protein	Function_ID	Function_description	E-value
NZ_CP045870.1\|WP_032709826.1\|1864281_1864815_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	4.30434e-13
NZ_CP045870.1\|WP_032709816.1\|1874939_1876544_-\|aldehyde-dehydrogenase-(NADP(+))	gnl\|CDD\|143447	cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdehyde Dehydrogenase. Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids.	0
NZ_CP045870.1\|WP_023288208.1\|1878765_1879713_+\|4-hydroxyproline-epimerase	gnl\|CDD\|172473	PRK13970, PRK13970, 4-hydroxyproline epimerase.	1.14717e-150
NZ_CP045870.1\|WP_032709815.1\|1876558_1877479_-\|dihydrodipicolinate-synthase-family-protein	gnl\|CDD\|188630	cd00408, DHDPS-like, Dihydrodipicolinate synthase family. Dihydrodipicolinate synthase family. A member of the class I aldolases, which use an active-site lysine which stabilizes a reaction intermediate via Schiff base formation, and have TIM beta/alpha barrel fold. The dihydrodipicolinate synthase family comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways and includes such proteins as N-acetylneuraminate lyase, MosA protein, 5-keto-4-deoxy-glucarate dehydratase, trans-o-hydroxybenzylidenepyruvate hydratase-aldolase, trans-2'-carboxybenzalpyruvate hydratase-aldolase, and 2-keto-3-deoxy- gluconate aldolase. The family is also referred to as the N-acetylneuraminate lyase (NAL) family.	4.68585e-101
NZ_CP045870.1\|WP_032709821.1\|1866354_1867227_-\|2-dehydro-3-deoxygalactonokinase	gnl\|CDD\|377446	pfam05035, DGOK, 2-keto-3-deoxy-galactonokinase. 2-keto-3-deoxy-galactonokinase EC:2.7.1.58 catalyzes the second step in D-galactonate degradation.	2.84972e-115
NZ_CP045870.1\|WP_032709818.1\|1870954_1872175_+\|amino-acid-deaminase	gnl\|CDD\|143492	cd06818, PLPDE_III_cryptic_DSD, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Bacterial Cryptic D-Serine Dehydratase. This subfamily is composed of Burkholderia cepacia cryptic D-serine dehydratase (cryptic DSD), which is also called D-serine deaminase, and similar bacterial proteins. Members of this subfamily are fold type III PLP-dependent enzymes with similarity to bacterial alanine racemase (AR), which contains an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain. AR exists as dimers with active sites that lie at the interface between the TIM barrel domain of one subunit and the beta-sandwich domain of the other subunit. Based on similarity, it is possible cryptic DSDs may also form dimers. Cryptic DSDs are distinct from the ubiquitous bacterial DSDs coded by the dsdA gene, mammalian L-serine dehydratases (LSD) and mammalian serine racemase (SerRac), which are fold type II PLP-dependent enzymes. At present, the enzymatic and biochemical properties of cryptic DSDs are still poorly understood. Typically, DSDs catalyze the dehydration of D-serine to aminoacrylate, which is rapidly hydrolyzed to pyruvate and ammonia.	0
NZ_CP045870.1\|WP_032709823.1\|1865768_1866368_-\|2-dehydro-3-deoxy-6-phosphogalactonate-aldolase	gnl\|CDD\|181670	PRK09140, PRK09140, 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; Reviewed.	3.51297e-109
NZ_CP045870.1\|WP_032709813.1\|1879709_1880819_+\|FAD-binding-oxidoreductase	gnl\|CDD\|223737	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism].	3.18611e-51
NZ_CP045870.1\|WP_032709809.1\|1883682_1884447_+\|2-hydroxyhepta-2,4-diene-1,7-dioate-isomerase	gnl\|CDD\|185125	PRK15203, PRK15203, 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase; Provisional.	9.50189e-143
NZ_CP045870.1\|WP_015368415.1\|1868911_1869304_-\|RidA-family-protein	gnl\|CDD\|100004	cd00448, YjgF_YER057c_UK114_family, YjgF, YER057c, and UK114 belong to a large family of proteins present in bacteria, archaea, and eukaryotes with no definitive function. The conserved domain is similar in structure to chorismate mutase but there is no sequence similarity and no functional connection. Members of this family have been implicated in isoleucine (Yeo7, Ibm1, aldR) and purine (YjgF) biosynthesis, as well as threonine anaerobic degradation (tdcF) and mitochondrial DNA maintenance (Ibm1). This domain homotrimerizes forming a distinct intersubunit cavity that may serve as a small molecule binding site.	1.97772e-30
NZ_CP045870.1\|WP_020079694.1\|1880815_1881079_+\|(2Fe-2S)-binding-protein	gnl\|CDD\|379229	pfam13510, Fer2_4, 2Fe-2S iron-sulfur cluster binding domain. The 2Fe-2S ferredoxin family have a general core structure consisting of beta(2)-alpha-beta(2) which a beta-grasp type fold. The domain is around one hundred amino acids with four conserved cysteine residues to which the 2Fe-2S cluster is ligated. This cluster appears within sarcosine oxidase proteins.	6.15813e-17
NZ_CP045870.1\|WP_032709824.1\|1864908_1865772_+\|MurR/RpiR-family-transcriptional-regulator	gnl\|CDD\|224651	COG1737, RpiR, Transcriptional regulators [Transcription].	2.49049e-72
NZ_CP045870.1\|WP_015368421.1\|1877630_1878455_-\|AraC-family-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	1.3174e-26
NZ_CP045870.1\|WP_015704301.1\|1873322_1874924_-\|APC-family-permease	gnl\|CDD\|223605	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism].	5.6173e-48
NZ_CP045870.1\|WP_015368409.1\|1863433_1864249_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|181904	PRK09491, rimI, ribosomal-protein-alanine N-acetyltransferase; Provisional.	4.67644e-16
NZ_CP045870.1\|WP_032709820.1\|1867236_1868724_-\|sodium:solute-symporter-family-protein	gnl\|CDD\|271357	cd10322, SLC5sbd, Solute carrier 5 family, sodium/glucose transporters and related proteins; solute-binding domain. This family represents the solute-binding domain of SLC5 proteins (also called the sodium/glucose cotransporter family or solute sodium symporter family) that co-transport Na+ with sugars, amino acids, inorganic ions or vitamins. Family members include: the human glucose (SGLT1, 2, 4, 5), chiro-inositol (SGLT5), myo-inositol (SMIT), choline (CHT), iodide (NIS), multivitamin (SMVT), and monocarboxylate (SMCT) cotransporters, as well as Vibrio parahaemolyticus glucose/galactose (vSGLT), and Escherichia coli proline (PutP) and pantothenate (PutF) cotransporters. Vibrio parahaemolyticus Na(+)/galactose cotransporter (vSGLT) has 13 transmembrane helices (TMs): TM-1, an inverted topology repeat: TMs1-5 and TMs6-10, and TMs 11-12 (TMs numbered to conform to the solute carrier 6 family Aquifex aeolicus LeuT). One member of this family, human SGLT3, has been characterized as a glucose sensor and not a transporter. Members of this family are important in human physiology and disease.	3.01019e-90
NZ_CP045870.1\|WP_032709810.1\|1883053_1883686_+\|2-hydroxyhepta-2,4-diene-1,7-dioate-isomerase	gnl\|CDD\|185125	PRK15203, PRK15203, 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase; Provisional.	2.28953e-131
NZ_CP045870.1\|WP_032709819.1\|1869314_1870754_-\|D-aminoacylase	gnl\|CDD\|238622	cd01297, D-aminoacylase, D-aminoacylases (N-acyl-D-Amino acid amidohydrolases) catalyze the hydrolysis of N-acyl-D-amino acids to produce the corresponding D-amino acids, which are used as intermediates in the synthesis of pesticides, bioactive peptides, and antibiotics.	2.8567e-160
NZ_CP045870.1\|WP_032709812.1\|1881059_1882322_+\|NAD(P)/FAD-dependent-oxidoreductase	gnl\|CDD\|223523	COG0446, HcaD, Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only].	1.6954e-21
NZ_CP045870.1\|WP_155961168.1\|1861114_1863406_+\|phosphatidylglycerol--membrane-oligosaccharide-glycerophosphotransferase	gnl\|CDD\|179648	PRK03776, PRK03776, phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase.	0

>NZ_CP045870.1|WP_032709818.1|1870954_1872175_+|amino-acid-deaminase
MKYHSAPLIPHKSALMSAPANLLAEEVCLPAALLKKSALENNISWMQRYADARGVSLAPHGKTTMTPWIFQAQQRAGAWGIGVGSAWQASAAMASGIQRVLMVNQLVGKANMQVVAQLKAHYRAVDFICCVDSEANVRALSAFFAAQGQTLDVLIELGVPGGRCGCRSVDDALALAQRVSDLPGLRLRGLELYEGVLHGDDPQPQVEALLQQAAALACRMEPLVDGEFILTGAGTVWYDVVCNIWLAAAKPRRCRIVIRPGCYITHDRGIYDLAQQELIARDPIACDLAGDLTSALELMAMVQSVPEADRAVVNFGKRDCAFDAGLPQPIAHYRNGQQLALRAESIVSIGIMDQHCMLRLAPGSDVQVGDILLFGTSHPCLTFDKWKTLLLVDDDYNVLDELDTLF
>NZ_CP045870.1|WP_032709819.1|1869314_1870754_-|D-aminoacylase
MKVDWLFKNVTVIDGSGGPQYRADVAVKGDRIMAIAPALDVAAEQVIDGQGRVLAPGFIDVHTHDDINVIRMPEYLPKLSQGVTTVIVGNCGISAATATLRGEVPDPMNLLGEQQHFIYPTVEAYAHAVEAARPSLNVGTLIGHTALRNNHMDDLFRPANETEIAGMRVQLRDALRQGALGLSTGLAYASAFQSTTEEVMALAEELAAGKGVYTTHLRSEFEPILEALDEAFRIGRHGNVPVVVSHHKCAGAKNWGRTKETLAFFDEMRQQQDIACDCYPYSASSSTLDMKQVTDEFDIVITWSEAQPEQAGKTLQQIANEWQVSLHDAAARLMPAGAIYYNMDEQDVRRVMRYPVTMIGSDGLPNDPMPHPRLWGAFPRVLGHYSRDEQLFPLTTAVHKMTGLSAARFQLADRGLVKIGYFADLVLFDPQTVRDVASFSDPKRPADGIEAVMVNGVMSYGSDKKITGRAGRFLRRRMD
>NZ_CP045870.1|WP_015368415.1|1868911_1869304_-|RidA-family-protein
MSIKRYGVEGGTGTGGQHLPFARAVEAGGWLYVSGQTPMKNGEVVEGGIVEQSRLAIQNCVDIMSEAGYGLADVVHVKVILTDARYFQSFNKVFREFFGDNPPARICCVADLVVDCKVEVDVTCFNAARQ
>NZ_CP045870.1|WP_032709820.1|1867236_1868724_-|sodium:solute-symporter-family-protein
MNNMSFMIWFSVYACAMITLGWYVSRKQKTGEDFLLGGRSLPMILTLGSTVGTMVGTGSSVGAVGFGYSNGWAGMLYGLGGAVGILLVAWLFAPVRKLRFMTMSEEMSYYTGGSKIIKNLVAILIFIASIGWLGAHILGGGLYLAWASGIDINVAKSIIALAFVVYVGIGGYSAVVWIDTIQSIVLFVGFILMAVLAVHHVGGWSHIQQAVDPAAQSLFAVDKLGVLPALSLAMVIGVGVLATPSYRQRIYSAKTVSSVRQSFTITGLLYLGFSFLPAIIGMAVWTMNPQLENSGFAFLFATQVLPPVLAMAILIAGMSANMSSGSSDAIAAVSIMLRDLYTLVTGHMPAPEKAIRLSRIFLVLVIALALLFALTSNDIISYITKMISMIMSGMFICTMLGRFWTRFNWQGAVAALAGGAGASVAVLVDSDWLAFWGNPCIPAVLTSLVASVVVTLLTPASSLSREQALEMITRERESRPTPPPLPIGKRHTSRG
>NZ_CP045870.1|WP_032709821.1|1866354_1867227_-|2-dehydro-3-deoxygalactonokinase
MNEYIAVDWGSTQLRAWRMRDGECIDKLKLPCGVTRLNGQRAEAVFQQQLAPWRGDPALPVVMAGMIGSDAGWQPVPYLACPLALEALNGQLHEVAENVWIVPGLKVAQAADYDVMRGEETQLLGAWQLMPAECYVMPGTHCKWVQVQNGVVRQFATAMTGELHHLLLNHSLLGQQLPVQQPDDAAFALGMEKGLTQPALLDGLFSARAARVLGALAAASVSDYLSGLLIGAEVATFSERYRASRVVLVGEHSLSARYQQAMAARGLAVSCCSGEAAFLSSIARMIDGQG
>NZ_CP045870.1|WP_032709823.1|1865768_1866368_-|2-dehydro-3-deoxy-6-phosphogalactonate-aldolase
MDKVKLVAILRGIQPGEAAEHIAALIEAGFRYIEIPLNSPDWQQSIPAMVRQFGERAVIGAGTVLKVEQVDFLAEAGAKLIVTPNTAPAVIRRAVDKGMLVCAGCATASEAFSALDAGAQWLKIFPSSAFGPDYIRALKAVLPPEVPVLAVGGVTPENLHSWRQAGCAGAGLGSDLYRAGQPLARTCQQAQRFIAACGD
>NZ_CP045870.1|WP_032709824.1|1864908_1865772_+|MurR/RpiR-family-transcriptional-regulator
MAYSIDIISCITDRFMALTATEKRIAQFILDDVAAAAAMPIAELARLTDTSQASVTRFARALGCKDVRELKMKLAQSLAIGQRFILDVPDLEGVQGIYESIISVLETNRRALDLAALKRAVEWISDARQVLALGMGGGSTICAQEIQYRLFRLGLPVVSQSDGLLVRMMSSAVTAKDVVIVLSLGGYTKEMIESAAIARQYGAKIVAITPPETPLAAQADIVLPLLVSENDYIFKPSASRYAMLAMVDVLATELAMANKPQAKDRLRRIKLALDDHRDGVDRLPLGD
>NZ_CP045870.1|WP_032709826.1|1864281_1864815_+|GNAT-family-N-acetyltransferase
MKTNTINPTITFRLTEEGDLPQLPALERSAAQSFARIPAFAWLAESPVMSVEQHRQYLETGHSLLALAHDRPVGFLLSEPLDDALFIVEISVHQQWQGQGIGRALLSQTIDNARRDGFPAVTLTTFREVPWNAPFYTRLGFTILNELHLPEGLAAKRALETEHGLTAETRCAMRLDF
>NZ_CP045870.1|WP_015368409.1|1863433_1864249_-|GNAT-family-N-acetyltransferase
MEFTAVPAVQFSGAQLTTILNDCFADYLVPVSMSVDLFVQRFSAEGLNLLQSKVWLAGDEPAAIGLIARRGRDARLAAFAIHPGFRGKGRGRQLMTSLIADLRAQGVQRMWLEVIRDNHRAVALYQSLGFTVRHGLCGYLSAGQAEPRESSLDEYDLLSLLRHASLELEGQLPWLLDPLTFITLPCRALTLQQQAFAVLATTASKPQLQFLWLTPAARGRGLGREMLLALAQQFPGLSTSVTIPETFTPLFKSAGYAPLALQQYEMCLRLN
>NZ_CP045870.1|WP_155961168.1|1861114_1863406_+|phosphatidylglycerol--membrane-oligosaccharide-glycerophosphotransferase
MSELLSIALFLASVVIYAWKAGRNTWWFSATLAVLGLFVVLNITLYASDYFTGDGINDAVLYTLTNSLTGAGVSKYILPGIGLVLALVAVFGALGWILRRRRHHPHHFGYSLIALVLALASVDASPAFRQITELVKSQSRDGDPDFTAYYKEPSKSINNPQLNLVYIYGESLERTYFNNEAFPKLTPELGKIKSEGLDFSNTAQLPGTDYTIAGMVASQCGIPLFAPFEGNASAAVSSFFPQNICLGDILKNSGYENYFVQGANLRFAGKDVFLKSHGFDHLYGAEELKTTVADPSYRNDWGFYDDTVLDETWKKFEALSQSGKRFSLFALTVDTHHPDGFISRTCERKRYDMDGKKNLSFSAVACSQEHIAALIEKIKASPYFKNTVIVVSSDHLAMKNTAWDYLNKQDRSNLFFILRGDQPQQDVLAVKRNTMDNGATVLDILGGDNYIGLGRSSLSAESLSTIFMNMKDKVLAWKPDVIRLWNFPKEIKNFSIDSQKNMIAFSGSHFRLPLLLRVSDQRVEPIPESEYSAPLRFQLADFAPRDNFVWVDRCYKMGQLWRPELALSTDWCVSQGQLGGEQKVQHVDKPQWQGKTAFKDTVIDMERYKGNVDTLKIVDNEIRYKADSFVFNVAGAPEEVKQFSGISRPELWGRWSNAQLGDEVKIEYKKPLPEKFDLVITAKAFGPNANQPIPVRVGKSEQVLTLANEVTTTTLHFDNPARSNILTITPPEPQSTNEGNIVGHAPRQLGIGMVDIKIVSREG
>NZ_CP045870.1|WP_015704301.1|1873322_1874924_-|APC-family-permease
MTIHSTHNSQTRVAESGKFKKQLTLTDLTFIGLGAIFGSGWLFAASHVASIAGPAGIASWVIGGFAVLLLGIVYCELGAALPRAGGIIRYPVFSHGELMGYLLGFITLIAFSSLISIEIVAARQYAAAWFPALTQPGSSSPTLLGWVVQFLLLCFFFALNYYSVKTFARSNNFISVLKFLVPLLVVVTLFAFFKPENLHAQGIAPFGMSGVEAAISAGGIIFAYLGLTPIISVASEVQKPQRTIPIALILSVVLSTIIYVLLQLAFLGSIPTEMLNGGWAEVSKQFSLPYRDIAITLGMGWLAFMVISDAIISPSGTGNIYMNATPRVIYGWAKAGTFFKAFTHIDKASGIPRPALWLTFGLSIFWTLPFPSWEQLISVVSAALVLSYAIAPVTAAGLRRNAPDLPRPFRVRAFGIIGPVSFMISALIVYWSGWNTLSWLLGLQIVMFVVYVMCKGKVPEHTVSLAQQVKSSLWLIVFYALIILFSWLGSFGGLNVIGHPWDTVLVAAMSLGIYYWGARSCLPQANFSGDEEE
>NZ_CP045870.1|WP_032709816.1|1874939_1876544_-|aldehyde-dehydrogenase-(NADP(+))
MNASQTMAGRQFIAGRRIASGEATLLSLRAVDGEATGHRFYPASCEEAAQAAEAAQQAFAVYSQTTPQQRARFLNAIADELDALGEAFFAIAGQETALPLARLQGERARTSGQLRMFAGVILRGDTFAARIDTALADRQPLPRPDLRQYQQALGPVAVFGASNFPLAFSTAGGDTASALAAGCPVVVKAHPGHMATAELTAEAIVRAVVRCGLPGGVFNMIFGTDIGAELVRHPAIQAVGFTGSLAGGKALYQLAQQRPQPIPLFAEMSAINPLIILPQALQTRAEALANELVASFTLGGGQFCTRPGLILALCGAGLERFKSALCAAVAGSPPQVLLNAPTLQHYHQGVAALAAHPRIEKLANGIAAGAGQAQTLLWQAQAEDLLAQDTLLQTEVFGPLSLLVEVDDVAQLQAVVKALQGQLTATLHAEADDSPLAASLLPLLCEKAGRVLFNGYPTGVEVCDAMVHGGPWPATTDARGTSVGSRAIERFLRPVCLQNAPAALLPPALQDANPLNLLRLVNGQWTREAISSPH
>NZ_CP045870.1|WP_032709815.1|1876558_1877479_-|dihydrodipicolinate-synthase-family-protein
MSKKVIHWSGVFPAVSTQFRSDYSLDLDATHAVMKNLVKDGVSGLVVCGSVGENTSLSTDEKLQIIEVAKDAAGGKIPVIAGVAEFTTAFAQKMAKEAERVGVDGIMVMPALVYSSKPHETAAHFRSVASATDLPIMVYNNPPIYKNDVTPDILATLTDCDNIVCFKDSSGDTRRFIDLRNTVGDRFVLFAGLDDVVVESIAVGAEGWISGMSNAFPREGETLFRLARQQRYEEAMALYRWFMPLLHLDARPDLVQCIKLCEELLGRGSAITRPPRLALEGETRQQVVAIVEQALATRPTLPDVGL
>NZ_CP045870.1|WP_015368421.1|1877630_1878455_-|AraC-family-transcriptional-regulator
MIGVSDAPPPRAVNQPELAVDELSQICEGLARQRPENMPALLNALALIAPLLNAIPNVVFFIKDRQARYLLANLTLARRCGFKSVSSLLGKTSADVFPSALGQGYTEQDLRVLREGVTLRDQLEMHLYNGRERGWCLTQKLALRDISGQVIGMAGISHDLQEAHARHPAWQRLAIVDDHIRRHYHRPIAMEELTALSGMSIAQIERYCKRIFHLTPRQMIHKVRLEKATELLAGDTPITDIALQCGYTDHSAFSRQFKAMTGSTPRDFRLTLLG
>NZ_CP045870.1|WP_023288208.1|1878765_1879713_+|4-hydroxyproline-epimerase
MTAPRPPITLRAIDSHTGGEPTRLIVDGFPDLGGGSMAKRRDRFARDFDHWRQAAILEPRGNDVLVGALLCKPVSAAATAGVIFFNNAGFLNMCGHGTIGLIASLAWLGRIQPGVHLIETPVGDVSATLHDDGSVSVQNVPARRWKKQIRVETALGPVIGDIAWGGNWFFLINDHPFAITPEHIPQLTDYAWAVREGLEAAGIRGDDGGVIDHIELFADDDTADSRSFVLCPGKAWDRSPCGTGTSAKLACLAQDGKLQPGEIWRQASIIGSQFTASYQRTAEGIIPTIRGEAWVCGDNQLILNPDDPFCWGIAP
>NZ_CP045870.1|WP_032709813.1|1879709_1880819_+|FAD-binding-oxidoreductase
MKQCDVIVIGAGIIGAACAWQLAKRGQSVTLIDDGQPGATAAGMGHLVCMDDDPAELALSAWSLERWRAITPRMPDNCAWRGCGTLWLAESEEEMAGAGDKQRRMAGHQVHSELQTPQQIAGREPLLRDGLAGGLWVPGDGIVYAPNVARWLITDAGNHLTCLRDSVQTIEEPQVLLASGQRLQARAIVVACGLEANALLAENWLRPKKGQLAITDRYQPRVHHQLVELGYGTSAHGGGTSVAFNLQPRPTGQLLIGSSRQFDNRERELDLPLLAQMLDRARHFVPALATLNIIRCWSGLRAASQDGNPLIGPHPTRRGLWLALGHEGLGVTTAPASAELLAAQILDERCPLAPDAWLPARLSQQEAIA
>NZ_CP045870.1|WP_020079694.1|1880815_1881079_+|(2Fe-2S)-binding-protein
MNATLTIIVDGEALTVPEGISVAAALALTGDPTTRQAVNGGLRAPFCGMGVCQECRVTVDGLRVLACQTLCRSDMQIERSRDEHAAL
>NZ_CP045870.1|WP_032709812.1|1881059_1882322_+|NAD(P)/FAD-dependent-oxidoreductase
MNTLRCDILILGAGPAGMAAALSAAACDKQVIILDDNPAPGGQIWRAGPQATQPALARRYRDAIAASAAIRLVNGARLIARPSAYSVLFETADGGGVVYWQKLILCCGARELSLPFPGWTLPGVTGAGGLQAQIKQGLALKGEKVVIAGSGPLLLAVADTVNKAGGEVTNIIEQAPLPALLRFAGGLWRWPQKLRQLATLAPKGYLSGTQVIRAHGTTRLEAVTLRQRGVERTIACDRLAIGYGLIPNIETALLFGCATAQEAIQVNRWQQTSIADIYAAGECTGFGGSELALAEGEIAGFAAAGTSHQAQALFARRARWQRFADAINRAFRLAESLKNAATPESLLCRCEDVRCGDVAAAGGWPQAKLTQRCGMGACQGRTCAASARWLYGWPLPQPREPLAPARAETLIALARLSAEP
>NZ_CP045870.1|WP_032709810.1|1883053_1883686_+|2-hydroxyhepta-2,4-diene-1,7-dioate-isomerase
MKGTIFAVALNHRSQLDAWREAFQQAPYKTPPKTAVWFIKPRNTVIGDGEAIPHPQGETVQSGATVALIVGKTARKVAAEEAADYIAGYALANDVSLPEESFYRPAIKAKCRDGFCPIGALSAVRNVDNLTIITEINGREADSWHTGDLQRNAAQLLSALSEFATLNPGDAILIGTPHSRVTLRPGDRVRILADGFPALENPVVAEGELA
>NZ_CP045870.1|WP_032709809.1|1883682_1884447_+|2-hydroxyhepta-2,4-diene-1,7-dioate-isomerase
MKQARIEWQEQVRDVLVDERDQVRLPDGTVLKEGEFRWLPPADGTLFALGLNYADHASELEFKPPTEPLVFIKAPNTFIGHQQQSVRPDNVEYMHYEAELVVVIGKTARHVSEAEAMDYVAGYTVCNDYAIRDYLENYYRPNLRVKSRDTLTPIGPWIVAKEAIPDPHNLALRTWVNGELRQQGTTADLIFSIPFLIAYLSEFMTLQPGDMIATGTPKGLSDVVPGDEVIVEVEGVGRLVNHIISQQAYEETLS

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Crispr_ID: NZ_CP045870_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045870_3

2186928-2187056

Orphan

Consensus_repeat	Method
TTCCCGGGTCGCGGCGTTCCGCCTTACCCGGCCTACAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045870_3

>merge|NZ_CP045870|3|2186928-2187056|CRISPRCasFinder
TTCCCGGGTCGCGGCGTTCCGCCTTACCCGGCCTACAGGTCGCTCACAGCGCAAACGGTAGCCCGGCTGAGCGTAGCGTAAGCCGGGAAATTTCCCGGGTCGCGGCGTTCCGCCTTACCCGGGCTACAG

>NZ_CP045870|3|3|2186928-2187056|CRISPRCasFinder
TTCCCGGGTCGCGGCGTTCCGCCTTACCCGGCCTACAG	GTCGCTCACAGCGCAAACGGTAGCCCGGCTGAGCGTAGCGTAAGCCGGGAAAT
TTCCCGGGTCGCGGCGTTCCGCCTTACCCGGGCTACAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045870.1\|WP_015368695.1\|2196062_2196788_+\|phosphonate-metabolism-transcriptional-regulator-PhnF	unknown	unknown	gnl\|CDD\|182227
NZ_CP045870.1\|WP_015368691.1\|2192814_2194317_-\|glycine-betaine/L-proline-transporter-ProP	unknown	unknown	gnl\|CDD\|182611
NZ_CP045870.1\|WP_032709642.1\|2177578_2180026_+\|poly-beta-1,6-N-acetyl-D-glucosamine-export-porin-PgaA	unknown	unknown	gnl\|CDD\|236644
NZ_CP045870.1\|WP_015368694.1\|2195471_2195906_+\|VOC-family-metalloprotein-YjdN	unknown	unknown	gnl\|CDD\|236656
NZ_CP045870.1\|WP_015704089.1\|2183862_2184654_-\|DsbA-family-protein	unknown	unknown	gnl\|CDD\|239321
NZ_CP045870.1\|WP_032709635.1\|2190233_2191586_-\|alpha-glucosidase/alpha-galactosidase	unknown	unknown	gnl\|CDD\|185035
NZ_CP045870.1\|WP_020079844.1\|2184873_2185557_+\|TerC-family-protein	unknown	unknown	gnl\|CDD\|163429
NZ_CP045870.1\|WP_080473222.1\|2194623_2194809_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045870.1\|WP_015704087.1\|2187113_2187485_-\|plasmid-stabilization-protein	unknown	unknown	gnl\|CDD\|119304
NZ_CP045870.1\|WP_015368683.1\|2185557_2185683_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045870.1\|WP_020079842.1\|2182042_2183374_+\|poly-beta-1,6-N-acetyl-D-glucosamine-synthase	unknown	unknown	gnl\|CDD\|236882
NZ_CP045870.1\|WP_072201361.1\|2188725_2190129_-\|melibiose:sodium-transporter-MelB	unknown	unknown	gnl\|CDD\|182453
NZ_CP045870.1\|WP_155961171.1\|2180034_2182050_+\|poly-beta-1,6-N-acetyl-D-glucosamine-N-deacetylase-PgaB	unknown	unknown	gnl\|CDD\|184754
NZ_CP045870.1\|WP_015368685.1\|2186615_2186921_+\|chaperone-modulator-CbpM	unknown	unknown	gnl\|CDD\|182346
NZ_CP045870.1\|WP_015368687.1\|2187494_2188451_-\|plasmid-stability-protein-StbA	unknown	unknown	gnl\|CDD\|310773
NZ_CP045870.1\|WP_020079843.1\|2183370_2183805_+\|poly-beta-1,6-N-acetyl-D-glucosamine-biosynthesis-protein-PgaD	unknown	unknown	gnl\|CDD\|184756
NZ_CP045870.1\|WP_020079840.1\|2176361_2176928_-\|LuxR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|99777
NZ_CP045870.1\|WP_015368693.1\|2194851_2195187_+\|phnA-family-protein	unknown	unknown	gnl\|CDD\|182315
NZ_CP045870.1\|WP_015704084.1\|2191822_2192764_+\|transcriptional-regulator-MelR	unknown	unknown	gnl\|CDD\|182416
NZ_CP045870.1\|WP_015368684.1\|2185698_2186616_+\|curved-DNA-binding-protein	unknown	unknown	gnl\|CDD\|182347

Protein	Function_ID	Function_description	E-value
NZ_CP045870.1\|WP_015368695.1\|2196062_2196788_+\|phosphonate-metabolism-transcriptional-regulator-PhnF	gnl\|CDD\|182227	PRK10079, PRK10079, phosphonate metabolism transcriptional regulator PhnF; Provisional.	3.79681e-164
NZ_CP045870.1\|WP_015368691.1\|2192814_2194317_-\|glycine-betaine/L-proline-transporter-ProP	gnl\|CDD\|182611	PRK10642, PRK10642, proline/glycine betaine transporter ProP.	0
NZ_CP045870.1\|WP_032709642.1\|2177578_2180026_+\|poly-beta-1,6-N-acetyl-D-glucosamine-export-porin-PgaA	gnl\|CDD\|236644	PRK10049, pgaA, outer membrane protein PgaA; Provisional.	0
NZ_CP045870.1\|WP_015368694.1\|2195471_2195906_+\|VOC-family-metalloprotein-YjdN	gnl\|CDD\|236656	PRK10148, PRK10148, VOC family metalloprotein YjdN.	1.51939e-75
NZ_CP045870.1\|WP_015704089.1\|2183862_2184654_-\|DsbA-family-protein	gnl\|CDD\|239321	cd03023, DsbA_Com1_like, DsbA family, Com1-like subfamily; composed of proteins similar to Com1, a 27-kDa outer membrane-associated immunoreactive protein originally found in both acute and chronic disease strains of the pathogenic bacteria Coxiella burnetti. It contains a CXXC motif, assumed to be imbedded in a DsbA-like structure. Its homology to DsbA suggests that the protein is a protein disulfide oxidoreductase. The role of such a protein in pathogenesis is unknown.	2.60325e-46
NZ_CP045870.1\|WP_032709635.1\|2190233_2191586_-\|alpha-glucosidase/alpha-galactosidase	gnl\|CDD\|185035	PRK15076, PRK15076, alpha-galactosidase; Provisional.	0
NZ_CP045870.1\|WP_020079844.1\|2184873_2185557_+\|TerC-family-protein	gnl\|CDD\|163429	TIGR03717, R_switched_YjbE, integral membrane protein, YjbE family. Rfam model RF00080 describes a structured RNA element called the yybP-ykoY leader, or SraF, which may precede one or several genes in a genome. Members of this highly hydrophobic protein family commonly are preceded by a yybP-ykoY leader, which may serve as a riboswitch. From the larger group of TerC homologs (pfam03741), this subfamily contains protein YjbE from Bacillus subtilis. A transport function is proposed.	2.9443e-70
NZ_CP045870.1\|WP_015704087.1\|2187113_2187485_-\|plasmid-stabilization-protein	gnl\|CDD\|119304	pfam10784, Plasmid_stab_B, Plasmid stability protein. This family is conserved in the Enterobacteriales. It is a putative plasmid stability protein in that it is expressed from the operon involved in stability, but its actual function has not yet been characterized.	1.64202e-11
NZ_CP045870.1\|WP_020079842.1\|2182042_2183374_+\|poly-beta-1,6-N-acetyl-D-glucosamine-synthase	gnl\|CDD\|236882	PRK11204, PRK11204, N-glycosyltransferase; Provisional.	0
NZ_CP045870.1\|WP_072201361.1\|2188725_2190129_-\|melibiose:sodium-transporter-MelB	gnl\|CDD\|182453	PRK10429, PRK10429, melibiose:sodium transporter MelB.	0
NZ_CP045870.1\|WP_155961171.1\|2180034_2182050_+\|poly-beta-1,6-N-acetyl-D-glucosamine-N-deacetylase-PgaB	gnl\|CDD\|184754	PRK14582, pgaB, poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB.	0
NZ_CP045870.1\|WP_015368685.1\|2186615_2186921_+\|chaperone-modulator-CbpM	gnl\|CDD\|182346	PRK10265, PRK10265, chaperone modulator CbpM.	3.64328e-57
NZ_CP045870.1\|WP_015368687.1\|2187494_2188451_-\|plasmid-stability-protein-StbA	gnl\|CDD\|310773	pfam06406, StbA, StbA protein. This family consists of several bacterial StbA plasmid stability proteins.	1.808e-144
NZ_CP045870.1\|WP_020079843.1\|2183370_2183805_+\|poly-beta-1,6-N-acetyl-D-glucosamine-biosynthesis-protein-PgaD	gnl\|CDD\|184756	PRK14584, hmsS, hemin storage system protein; Provisional.	5.39751e-62
NZ_CP045870.1\|WP_020079840.1\|2176361_2176928_-\|LuxR-family-transcriptional-regulator	gnl\|CDD\|99777	cd06170, LuxR_C_like, C-terminal DNA-binding domain of LuxR-like proteins. This domain contains a helix-turn-helix motif and binds DNA. Proteins belonging to this group are response regulators; some act as transcriptional activators, others as transcriptional repressors. Many are active as homodimers. Many are two domain proteins in which the DNA binding property of the C-terminal DNA binding domain is modulated by modifications of the N-terminal domain. For example in the case of Lux R which participates in the regulation of gene expression in response to fluctuations in cell-population density (quorum-sensing), a signaling molecule, the pheromone Acyl HSL (N-acyl derivatives of homoserine lactone), binds to the N-terminal domain and leads to LuxR dimerization. For others phophorylation of the N-terminal domain leads to multimerization, for example Escherichia coli NarL and Sinorhizobium melilot FixJ. NarL controls gene expression of many respiratory-related operons when environmental nitrate or nitrite is present under anerobic conditions. FixJ is involved in the transcriptional activation of nitrogen fixation genes. The group also includes small proteins which lack an N-terminal signaling domain, such as Bacillus subtilis GerE. GerE is dimeric and acts in conjunction with sigmaK as an activator or a repressor modulating the expression of various genes in particular those encoding the spore-coat. These LuxR family regulators may share a similar organization of their target binding sites. For example the LuxR dimer binds the lux box, a 20bp inverted repeat, GerE dimers bind two 12bp consensus sequences in inverted orientation having the central four bases overlap, and the NarL dimer binds two 7bp inverted repeats separated by 2 bp.	0.000152172
NZ_CP045870.1\|WP_015368693.1\|2194851_2195187_+\|phnA-family-protein	gnl\|CDD\|182315	PRK10220, PRK10220, phnA family protein.	2.12983e-74
NZ_CP045870.1\|WP_015704084.1\|2191822_2192764_+\|transcriptional-regulator-MelR	gnl\|CDD\|182416	PRK10371, PRK10371, transcriptional regulator MelR.	0
NZ_CP045870.1\|WP_015368684.1\|2185698_2186616_+\|curved-DNA-binding-protein	gnl\|CDD\|182347	PRK10266, PRK10266, curved DNA-binding protein.	0

>NZ_CP045870.1|WP_015368685.1|2186615_2186921_+|chaperone-modulator-CbpM
MAKVTVTFTITELCLRTGVSEEELTEIVGLGMIEPHQPQAETWLFDDSAVTIVHRAVRLRNELELDWPGIAVALTLLDENARLTRENRLLQQRLARFLTHS
>NZ_CP045870.1|WP_015368684.1|2185698_2186616_+|curved-DNA-binding-protein
MELKDYYTILGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEAKFKDLAEAWEVLKDDQRRAEYDQLWQHRNDPQFNRQQHAHEQSYSQQDFDDIFSSMFGQQAHHARRQRAERGHDVEIEVAVFLEETLTEQTRTISYKLPVYNVFGMVESETPKTLNVKIPAGVSDGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDINGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTIPAGSQAGQRLRIKGKGLVSKTHTGDLFAVIKIVMPPKPDEKARELWQQLAESEASFDPRKTWGKA
>NZ_CP045870.1|WP_015368683.1|2185557_2185683_-|hypothetical-protein
MLKNLVTESLDQAALLSVGQMRKGGGEKWRKLDAVGGDGVQ
>NZ_CP045870.1|WP_020079844.1|2184873_2185557_+|TerC-family-protein
MNEILSQWDFAVILLQIIAIDLLLGGDNAVVIAMACRKLPAHLRTKAIVIGTLGAIIARVALLAVALYLLSLPWLKIVGALLLLWIGIKLVANEEEENDISSSSSLWRTAVTITVADVIMSLDNVLAVAAAGKGHLLLVALGVLISIPIIVAGSKLVLAILTRFPSVVLLGGALIGWIAGSMMVTDPTFVQLFPHSPNYLHFVAGAIGAALVLLEGWRRNYRSGTPE
>NZ_CP045870.1|WP_015704089.1|2183862_2184654_-|DsbA-family-protein
MSGIKNLLILALAGASLLPALASAADAPAATFTAEQEARIGKIAADYLVAHPEVLLQASQKLQQIQAEQQASAATQAVIKNADKLTQDKATPTYGPANGKVTVIEFFDYQCIYCSRLAPVMEQVIKDHPQTRFAFKEWPIFGSRWATSLDAAKTGLQIYQQKGAEAYLTYHNGVYATGHNEGKLTAADIQQQAKKVNFDAKKAADVEPALENINQLAQEIGLSGTPGVIVMPTTGATEATITVFPGLADKASLDAAIKKAGGQ
>NZ_CP045870.1|WP_020079843.1|2183370_2183805_+|poly-beta-1,6-N-acetyl-D-glucosamine-biosynthesis-protein-PgaD
MNEQTLILTEHRVLPRIFDGVLTAIAWAGFAFFLYANLLMQFTERGNDSWDAIMASFNTVLVYLLVAAINGWLLILWYQYNLRRYNARRHGSMASLRHEELAESFNIAPQIISEMSQYNLLTVYHDQIGRIIDLKINQNEEDES
>NZ_CP045870.1|WP_020079842.1|2182042_2183374_+|poly-beta-1,6-N-acetyl-D-glucosamine-synthase
MTDRIIAFSILCLVFGLPLGVAAVFTGELILDFVFFWPLFMSVLWITGGLYFWFQLERHWPWGKETPPPELVGNPLISILIPCFNEEKNARETIEAALAQRYRNIEVIAINDGSSDDTARVLNQLAEEYALLRVIHLAENQGKAVALKAGAAAARGDLLVCIDGDALLDRDTAAYLVAPLIQYPHVGAVTGNPRIRTRSTLIGRIQVGEFSSIIGLIKRTQRIYGRVFTVSGVIAAFRRQALADVGYWSPDMITEDIDISWKLQLRHWAIFFEPRALCWILMPETLKGLWKQRLRWAQGGAEVFLVNLRRLFRWEHHRMWPLFLEYALSTLWAFAYAVTIFLFIASHFAPLPENLTVRSLFPPEFTGLLLGVMCLLQFIASLYIERRYERGVAGSLFWVIWFPMVYWMIGLLTTIVAFPKVMLKRKRARARWVSPDRGKGRMS
>NZ_CP045870.1|WP_155961171.1|2180034_2182050_+|poly-beta-1,6-N-acetyl-D-glucosamine-N-deacetylase-PgaB
MVNKSIRISLMVIGWLLMTCALRAETIPFLPPEARPQPEANKPWPQNKFLVLAYHDVEDDAADQRYLAVRTSALNDQIGWLLHNGYKAVSVQNILDANAGLITLPPKAFLLSFDDGYSSFYTRVWPLLKAWNVPALWAPVGSWVDTPGQKKVDFGGLMTPRERFATWEMVRELAQSPLVEIGAHTWASHYGIQANPQGSREPAVANRFYDKASGRYESDQQFHQRIDTDVRKVSDKIADVTGKAPRAWVWPYGAANGTSLAIAKNRGYQLAFTLGDGLGDVRDLDNIPRLLISGNPSIKAFASQVTQIQEREPVRVMHVDLDYVYDKDPAQQRKNIDKLIQRVYDMKITHVFLQAFSDPLGDGTVKALYFPNRRLPMRADLFNFVAWQLQTRGGVKVYAWMPVLAFDLDSALPRVQRWDAQSNTLRQATRPYVRLSPWNSQVRDEIRDIYQDLARYATFDGVLFHDDAVLTDYEDAGTGAMAAWRAAGHREDIAQIRQNPAALHAWTRFKSQALIDFTRTLSQSVKAIRGPQVRTARNIFALPILQPESEAWFAQNLDDFLAAYDWTVPMAMPLMESVPVAESDAWLARLVRAVSARPGALKKTIFELQAKDWTLPQQNAIPDQQLVDWMRTLQLNGVNNYGYYPDDFLNNQPDISKIRPLFSSYWYPNHD
>NZ_CP045870.1|WP_032709642.1|2177578_2180026_+|poly-beta-1,6-N-acetyl-D-glucosamine-export-porin-PgaA
MGRSTRFNKLFFYRRTTFSFSISLLLLTPILAQGAESIYDQHVLQAREGNYSPFLDYLQQYQQQHALTPEQVADWLQVASWAGRDEEVIQVWQRYQVYMALPARGTAAAAQAYRNQKRWSSALALWDQALSQQPMNDDYLIGRIKTLADARHDGQALSEARRLAATTPSTAHLQTLSYVYLRQGKSWDQLLTDMRAQELAPQNRETLNSLLESLSSNRISTPALQWSAKTTLTPAQQRKLEMDAAAEWVRLADTPTRGEQERFRLAQAALNRYDALFARWRQDPQAAEDLARARIDRLGALYTRGDYPQVIKEYQSLTAAQQPVPDWAIGWVISSYLAQQNVEAALAIARQHPLYRPDPQDDRHELFYALLDSGQYQAARDYLAIVTNGVPYTRRLYGSPTPQPNDPWLNAQSLKVQYLLSTNALPEAERLSRRLAATAPGNQGLRIDYAAILQARGLPRAAERELKAAEALEPSNIPLERQQAYVAMDLQEWRQMELLTDDLLARSPEDLSTQKLVRAREVHHMSELRLNSTQGIHSDNPVSGSHDFSWDVAIYGPPIADNWRLFAGNRFAKGNFDEGKGSSRQLFGGIEWRPRDAWAELEISNNSFAGDNKPGARLSAWQSFNDRWQIGGEVERLSRQTPLRALRNGISANRGEGWVRWYQNERREYRFSAAASRFSDHNRRQEYTFSGKERLWQSPTITLDLEPGLSASANSRTDTLYYNPKRDFAATSALVADHVMYQHYDTVWSQQLAAGGGAYWQKAYSAGAIAMLGYGQRIRWNNVIDTGVMLNWDKRPYDGKRESNLSIALDANLRF
>NZ_CP045870.1|WP_020079840.1|2176361_2176928_-|LuxR-family-transcriptional-regulator
MFLVTQDHYLFEGVRIFFPDIIQLHSIEHKLFESDAEEFSVLVDSRAPLCFYDYLIPGAAEAGKRICCIMLDMRHREEHLLSLKWFLNMSLTPTDMANLFSLFLDVKSKRLTREWLKNFSLKPQEHMTLTLLRAGMTMDQIAGVLNTSVKSLYRKRIELYERLGLANFNEACLFIFKNRLLECPAQKR
>NZ_CP045870.1|WP_015704087.1|2187113_2187485_-|plasmid-stabilization-protein
MTLDRRKVLIYLRPDISASERFADAKIEAHHRGDRGDMSRTALLAGLALGEVDSRLPSMLAALLAEDTPPETLRRMLASFLEIQPASSAPASAPAAAPVKAPEPPAPVSESVSARNLAGSLPD
>NZ_CP045870.1|WP_015368687.1|2187494_2188451_-|plasmid-stability-protein-StbA
MRIFIDDGSTNIKMLWEQDGETFTHISPNSFKRGWSATFGAGKPFNYTVDDEKYSFDLITPDALPTNNIDWQYSPLNSIAVHHALLTSGLEPQDVEIVVTLPLTEFYDEDAQYRLDNIERKKKSLLREVKLNKGVVFNITKVTVRPESIPAGISLCDELKPSHSVLIVDLGGTTLDISMVAGQMTSVSRIYGDPKLGVSLVTDAVKLALARANTDTSSYNVDQIIINRHDEEYLTDNINDPDAVSEVKKVISNSIERLTTRVLTAIDSFKGYSHAIVIGGGAPLVADAIRERMGLREDRFVVADEPQFALVRGLKIIG
>NZ_CP045870.1|WP_072201361.1|2188725_2190129_-|melibiose:sodium-transporter-MelB
MTTKLSYGFGAFGKDFAIGIVYMYLMYYYTDIVGLSVGVVGTLFLVARILDAIADPIMGWIVNCTRSRWGKFKPWILIGTITNSVVLYMLFSAHHFSGGALLAWVWLTYLLWGFTYTIMDVPFWSLVPTITLDKREREQLVPYPRFFASLAGFVTAGVTLPFVSAVGGADRGFGFQMFTLVLIAFFVISTLVTLRNVHEVYSSDSGVSEDSSHLSLRQMVALIYKNDQLACLLGMALAYNTAANIIAGFAIYYFTYVIGSAEMFPYYMSYAGAANLLTLILFPRLVKGLSRRILWAGASIMPVLGCGVLLLMALSGVYNLALISLAGVLLNIGTALFWVLQVIMVADTVDYGEYTMNIRCESIAYSVQTLVVKAGSAFAAWFIAIVLGIIGYVPNVVQSSHTLLGMQAIMIALPTLFFALTLFLYFRYYKLNGDMLRRIQIHLLDKYRRVPENVVEPERPIVVPNQV
>NZ_CP045870.1|WP_032709635.1|2190233_2191586_-|alpha-glucosidase/alpha-galactosidase
MSAPKITFIGAGSTVFVKNILGDVFQRPALKSAHIALMDIDETRLEESHTVVRKLMDSVGANGEISCHRDRKTALRDADFVVVAFQIGGYEPCTVTDFEVCKRHGLEQTIADTLGPGGIMRALRTIPHLWAICDDMTEVCPNATMLNYVNPMAMNTWAMYARYPHIKQVGLCHSVQGTAEELARDLNLDPADLRYRCAGINHMAFYLSLEKKLADGSYVSIYPDLLQAYAEGRAPKPNLHGNPRCENIVRYEMFKKLGYFVTESSEHFAEYTPWFIKPGRDDLIARYKVPLDEYPKRCVEQLANWHKELESYKSGERIEVKPSREYASTIMNAIWTGEPSVVYGNVRNDNLIDNLPQGCCVEVACLVDANGIQPTKVGALPAHLAALMQTNINVQTLLTQAILNEDRDYVYYATMMDPHTAAVLGIEEIYALVDDLIASHGDWLPAWLHR
>NZ_CP045870.1|WP_015704084.1|2191822_2192764_+|transcriptional-regulator-MelR
MMEHRFTSLPPDPHMCSSDEKQSRSPLALYSEYQRMDIELRPPHAMATSHWHGQVEVNVPFDGDVEYLINNEVVRIEKGYITLFWACTPHQLTRPGDCQQMAIFNLPMHLFLSWPLDRELINHVTHGMVIKSLAAQQLSAFEVRRWQQELNHENEQIRQLAIDEIALMLKRLSLAGWQPILVNKTSRTHKNSVSRHAQFYVSQMLEFIAAHYDQALTVDAVAEHVKLNPNYAMGVFQRVMQQTMKQYITAMRINHVRALLSDTDKTILDIALTAGFRSSSRFYSTFTRYVGMPPQQYRKLSQQRRHSLAPPQP
>NZ_CP045870.1|WP_015368691.1|2192814_2194317_-|glycine-betaine/L-proline-transporter-ProP
MLKRKKIKPITLRDVTIIDDSKLRKAITAASLGNAMEWFDFGVYGFVAYALGKVFFPDADPSVQMIAALGTFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVMGAGVVVLISSVVGEENFLDWGWRIPFFLALPLGIIGLYLRHALEETPAFQQHVDTLEQGDREGLQEGPKVSFKEIATKHWRSLLTCIGLVISTNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMVGMLFVQPVIGMLSDRFGRRPFILVGSVALFTLSIPAFIMINSNVIGLIFAGLLLLAVVLNCFIGVMASSLPAMFPTHIRFSALASAFNISVLIAGLTPTLAAWLVETTQNLMMPAYYLMVIAVIGLITGLSMKETANRPLKGATPAASDIQEAKEILGEHYDNIEHKIEDIDQEIADLQEKRARLVQQHPRIND
>NZ_CP045870.1|WP_080473222.1|2194623_2194809_+|hypothetical-protein
MNKFNLCFTTDVYFWTLLTSVFQHILRKAKIITLRYFLEKIPDKSAGLRYNQPHFRLTAAV
>NZ_CP045870.1|WP_015368693.1|2194851_2195187_+|phnA-family-protein
MQLPHCPKCHSEYTYEDNGMYICPECAHEWNNAEPADDADALIVKDANGNLLADGDSVTVVKDLKVKGSSSMLKIGTKVKNIRLVEGDHNIDCKIDGFGPMKLKSEFVKKN
>NZ_CP045870.1|WP_015368694.1|2195471_2195906_+|VOC-family-metalloprotein-YjdN
MSLSPYIAFSGNCAAAIAFYQQALAAQLIHQITYGEMPQSAQDAEDGCASGQHLAADCIAHASLQVADSILMLSDSPSSDMEHYAGFVLVLEPKDIAEGKHWFEALADGGRIEMAWQETFWAHGFGKVVDRFGVPWMVNVVKQP
>NZ_CP045870.1|WP_015368695.1|2196062_2196788_+|phosphonate-metabolism-transcriptional-regulator-PhnF
MYLSRHPTSYPTRYQEIAARLEQELRHHYRCGDYLPAEQQLAARFEVNRHTLRRAIDQLVERGWVQRRQGVGVLVLMRPIDYPLNAQARFSQNLLEQGSHPTSEKLLSVLRPASSHVAEAFGIAEGETVIHLRTLRRVNGVALCLIDHYFADLRFWPVLQTFTHGSLHDLLRDQLAIELTRVRTKISARRAQAKESKLLEIPNMAPLLCVRTLNSREGETVTTEYSVSLTRADMIEFTMEH

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Crispr_ID: NZ_CP045870_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045870_4

3403114-3403228

Orphan

Consensus_repeat	Method
GCGGCTACGCCTTATCCGGGCTACCCAAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045870_4

>merge|NZ_CP045870|4|3403114-3403228|CRISPRCasFinder
GCGGCTACGCCTTATCCGGGCTACCCAACGATGCGCATCCGTAGCCCGGCTGAGCGCAGCGCGAGCCGGGGAAACCTTCCCGGATGGCGGTTACGCCTTATCCGGGCTACCCAAC

>NZ_CP045870|4|4|3403114-3403228|CRISPRCasFinder
GCGGCTACGCCTTATCCGGGCTACCCAAC	GATGCGCATCCGTAGCCCGGCTGAGCGCAGCGCGAGCCGGGGAAACCTTCCCGGATG
GCGGTTACGCCTTATCCGGGCTACCCAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045870.1\|WP_015703425.1\|3403745_3404357_-\|thioredoxin-domain-containing-protein	unknown	unknown	gnl\|CDD\|239321
NZ_CP045870.1\|WP_032709109.1\|3406901_3408335_-\|6-phospho-beta-glucosidase	unknown	unknown	gnl\|CDD\|184975
NZ_CP045870.1\|WP_008806429.1\|3409709_3410369_+\|hemolysin-III-family-protein	unknown	unknown	gnl\|CDD\|185044
NZ_CP045870.1\|WP_015369778.1\|3394926_3396105_+\|2-octaprenyl-6-methoxyphenyl-hydroxylase	unknown	unknown	gnl\|CDD\|235584
NZ_CP045870.1\|WP_002916480.1\|3397740_3398835_+\|glycine-cleavage-system-aminomethyltransferase-GcvT	unknown	unknown	gnl\|CDD\|234742
NZ_CP045870.1\|WP_015369786.1\|3406417_3406777_-\|copper-resistance-protein	unknown	unknown	unknown
NZ_CP045870.1\|WP_020077975.1\|3402313_3403057_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|182051
NZ_CP045870.1\|WP_020077968.1\|3391592_3392189_-\|5-formyltetrahydrofolate-cyclo-ligase	unknown	unknown	gnl\|CDD\|182385
NZ_CP045870.1\|WP_032709116.1\|3393613_3394930_+\|Xaa-Pro-aminopeptidase	unknown	unknown	gnl\|CDD\|182804
NZ_CP045870.1\|WP_004205298.1\|3392513_3392843_-\|cell-division-protein-ZapA	unknown	unknown	gnl\|CDD\|182874
NZ_CP045870.1\|WP_032709111.1\|3403252_3403756_-\|protein-disulfide-oxidoreductase	unknown	unknown	gnl\|CDD\|239309
NZ_CP045870.1\|WP_032709107.1\|3411674_3411941_+\|FAD-assembly-factor-SdhE	unknown	unknown	gnl\|CDD\|182803
NZ_CP045870.1\|WP_032709108.1\|3410467_3411451_-\|tRNA-modifying-protein-YgfZ	unknown	unknown	gnl\|CDD\|236567
NZ_CP045870.1\|WP_032709110.1\|3404358_3406368_-\|protein-disulfide-reductase	unknown	unknown	gnl\|CDD\|226685
NZ_CP045870.1\|WP_032709114.1\|3396115_3397318_+\|FAD-dependent-2-octaprenylphenol-hydroxylase	unknown	unknown	gnl\|CDD\|236139
NZ_CP045870.1\|WP_015369788.1\|3408454_3409183_-\|MurR/RpiR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224651
NZ_CP045870.1\|WP_015703422.1\|3409233_3409545_+\|ASCH-domain-containing-protein	unknown	unknown	gnl\|CDD\|179908
NZ_CP045870.1\|WP_015703428.1\|3398859_3399249_+\|glycine-cleavage-system-protein-GcvH	unknown	unknown	gnl\|CDD\|234918
NZ_CP045870.1\|WP_032709113.1\|3399379_3402253_+\|aminomethyl-transferring-glycine-dehydrogenase	unknown	unknown	gnl\|CDD\|235432
NZ_CP045870.1\|WP_015703432.1\|3393009_3393588_+\|YecA-family-protein	unknown	unknown	gnl\|CDD\|234976

Protein	Function_ID	Function_description	E-value
NZ_CP045870.1\|WP_015703425.1\|3403745_3404357_-\|thioredoxin-domain-containing-protein	gnl\|CDD\|239321	cd03023, DsbA_Com1_like, DsbA family, Com1-like subfamily; composed of proteins similar to Com1, a 27-kDa outer membrane-associated immunoreactive protein originally found in both acute and chronic disease strains of the pathogenic bacteria Coxiella burnetti. It contains a CXXC motif, assumed to be imbedded in a DsbA-like structure. Its homology to DsbA suggests that the protein is a protein disulfide oxidoreductase. The role of such a protein in pathogenesis is unknown.	2.48131e-54
NZ_CP045870.1\|WP_032709109.1\|3406901_3408335_-\|6-phospho-beta-glucosidase	gnl\|CDD\|184975	PRK15014, PRK15014, 6-phospho-beta-glucosidase BglA; Provisional.	0
NZ_CP045870.1\|WP_008806429.1\|3409709_3410369_+\|hemolysin-III-family-protein	gnl\|CDD\|185044	PRK15087, PRK15087, hemolysin; Provisional.	9.93513e-138
NZ_CP045870.1\|WP_015369778.1\|3394926_3396105_+\|2-octaprenyl-6-methoxyphenyl-hydroxylase	gnl\|CDD\|235584	PRK05732, PRK05732, 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated.	0
NZ_CP045870.1\|WP_002916480.1\|3397740_3398835_+\|glycine-cleavage-system-aminomethyltransferase-GcvT	gnl\|CDD\|234742	PRK00389, gcvT, glycine cleavage system aminomethyltransferase GcvT.	0
NZ_CP045870.1\|WP_020077975.1\|3402313_3403057_+\|SDR-family-oxidoreductase	gnl\|CDD\|182051	PRK09730, PRK09730, SDR family oxidoreductase.	9.60511e-170
NZ_CP045870.1\|WP_020077968.1\|3391592_3392189_-\|5-formyltetrahydrofolate-cyclo-ligase	gnl\|CDD\|182385	PRK10333, PRK10333, 5-formyltetrahydrofolate cyclo-ligase family protein; Provisional.	2.50811e-121
NZ_CP045870.1\|WP_032709116.1\|3393613_3394930_+\|Xaa-Pro-aminopeptidase	gnl\|CDD\|182804	PRK10879, PRK10879, proline aminopeptidase P II; Provisional.	0
NZ_CP045870.1\|WP_004205298.1\|3392513_3392843_-\|cell-division-protein-ZapA	gnl\|CDD\|182874	PRK10972, PRK10972, cell division protein ZapA.	3.38717e-64
NZ_CP045870.1\|WP_032709111.1\|3403252_3403756_-\|protein-disulfide-oxidoreductase	gnl\|CDD\|239309	cd03011, TlpA_like_ScsD_MtbDsbE, TlpA-like family, suppressor for copper sensitivity D protein (ScsD) and actinobacterial DsbE homolog subfamily; composed of ScsD, the DsbE homolog of Mycobacterium tuberculosis (MtbDsbE) and similar proteins, all containing a redox-active CXXC motif. The Salmonella typhimurium ScsD is a thioredoxin-like protein which confers copper tolerance to copper-sensitive mutants of E. coli. MtbDsbE has been characterized as an oxidase in vitro, catalyzing the disulfide bond formation of substrates like hirudin. The reduced form of MtbDsbE is more stable than its oxidized form, consistent with an oxidase function. This is in contrast to the function of DsbE from gram-negative bacteria which is a specific reductase of apocytochrome c.	8.32658e-48
NZ_CP045870.1\|WP_032709107.1\|3411674_3411941_+\|FAD-assembly-factor-SdhE	gnl\|CDD\|182803	PRK10878, PRK10878, FAD assembly factor SdhE.	5.73305e-47
NZ_CP045870.1\|WP_032709108.1\|3410467_3411451_-\|tRNA-modifying-protein-YgfZ	gnl\|CDD\|236567	PRK09559, PRK09559, putative global regulator; Reviewed.	0
NZ_CP045870.1\|WP_032709110.1\|3404358_3406368_-\|protein-disulfide-reductase	gnl\|CDD\|226685	COG4232, COG4232, Thiol:disulfide interchange protein [Posttranslational modification, protein turnover, chaperones / Energy production and conversion].	1.54027e-102
NZ_CP045870.1\|WP_032709114.1\|3396115_3397318_+\|FAD-dependent-2-octaprenylphenol-hydroxylase	gnl\|CDD\|236139	PRK08013, PRK08013, oxidoreductase; Provisional.	0
NZ_CP045870.1\|WP_015369788.1\|3408454_3409183_-\|MurR/RpiR-family-transcriptional-regulator	gnl\|CDD\|224651	COG1737, RpiR, Transcriptional regulators [Transcription].	1.55426e-57
NZ_CP045870.1\|WP_015703422.1\|3409233_3409545_+\|ASCH-domain-containing-protein	gnl\|CDD\|179908	PRK04980, PRK04980, hypothetical protein; Provisional.	1.76534e-62
NZ_CP045870.1\|WP_015703428.1\|3398859_3399249_+\|glycine-cleavage-system-protein-GcvH	gnl\|CDD\|234918	PRK01202, PRK01202, glycine cleavage system protein GcvH.	2.27348e-72
NZ_CP045870.1\|WP_032709113.1\|3399379_3402253_+\|aminomethyl-transferring-glycine-dehydrogenase	gnl\|CDD\|235432	PRK05367, PRK05367, aminomethyl-transferring glycine dehydrogenase.	0
NZ_CP045870.1\|WP_015703432.1\|3393009_3393588_+\|YecA-family-protein	gnl\|CDD\|234976	PRK01736, PRK01736, hypothetical protein; Reviewed.	1.57873e-121

>NZ_CP045870.1|WP_020077975.1|3402313_3403057_+|SDR-family-oxidoreductase
MAIALISGASRGIGRATALLLAQEGYTVAVNYHHNIKAATEVVNTIVESGGKATALRADISDEAQVMAMFEAIDRMGEPLTALVNNAGILFTQCTVESLSAERINRVLATNVTGYFLCCREAVKRMSHRHGGKGGAIVNVSSAASRLGAPGEYVDYAASKGAVDTLTTGLALEVAAQGIRVNGVRPGLIYTEMHASGGEPGRVDRVKNSLPMQRGGQPEEVAQAIAWLLSDKASYVTGSFLELAGGK
>NZ_CP045870.1|WP_032709113.1|3399379_3402253_+|aminomethyl-transferring-glycine-dehydrogenase
MTQTLSQLENRDAFIERHIGSDAQQQQEMLKTVGADSLNALIGQIVPQDIQLATPPQVGDATTEFAALAELKAIAGRNKRFKSYIGMGYTAVQLPPVIQRNMLENPGWYTAYTPYQPEVSQGRLESLLNFQQVTLDLTGLDIASASLLDEATAAAEAMAMAKRVSKLKNANRFFVAADVHPQTLDVVRTRAETFGFDVIVDDADKVLDHQDVFGVLLQQVGTTGEIHDYSKLIAELKARKVIVSVAADFMALVLLTAPGKQGADIVFGSAQRFGVPMGYGGPHAAFFAAKDEFKRSMPGRIIGVSKDAAGNTALRMAMQTREQHIRREKANSNICTSQVLLANIASLYAVFHGPAGLKRIAGRIHRLTDILADGLQKKGLKLRHAHYFDTLCVEVADKAAVLARAEALQINLRSDIHGAVGITLDEATTREDVLNLFRAIVGDDHGLDIDTLDKDVALDSRSIPAAMLRDDAILTHPVFNRYHSETEMMRYMHALERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFAELHPFCPVEQAEGYHQMIAQLSDWLVKLTGYDAVCMQPNSGAQGEYAGLLAIRHYHESRNEGHRDICLIPSSAHGTNPASAQMAGMQVVVVACDKNGNIDLADLREKAEQAGANLSCIMVTYPSTHGVYEETIREVCEIVHQFGGQVYLDGANMNAQVGITSPGFIGADVSHLNLHKTFCIPHGGGGPGMGPIGVKAHLAPFVPGHSVVQIEGMLTRQGAVSAAPFGSASILPISWMYIRMMGAEGLKQASQNAILNANYIATRLKDAYPVLYTGRDGRVAHECILDIRPLKEETGISELDIAKRLIDFGFHAPTMSFPVAGTLMVEPTESESKVELDRFIDAMLAIRTEIDRVKAGEWPLEDNPLVNAPHTQGELVSEWNHPYSRELAVFPAGLHNKYWPTVKRLDDVYGDRNLFCSCVPMSEYQ
>NZ_CP045870.1|WP_015703428.1|3398859_3399249_+|glycine-cleavage-system-protein-GcvH
MSNVPAELKYSKEHEWLRKEADGTYTVGITEHAQELLGDMVFVDLPEVGATVEAGADCAVAESVKAASDIYAPISGEIVAVNEELNDSPELVNSDPYADGWIFKIKASDEAQVAALLDATAYEALLEDE
>NZ_CP045870.1|WP_002916480.1|3397740_3398835_+|glycine-cleavage-system-aminomethyltransferase-GcvT
MAQQTPLYEQHTLCGARMVDFHGWMMPLHYGSQIDEHHAVRGDAGMFDVSHMTIVDFHGSRIREFLRYLLANDVAKLTTPGKALYTGMLTASAGVIDDLIVYFLSEDYFRLVVNSATREKDLAWISEQAEPYGLEITVRDDLSLIAVQGPQAKAKAATLFTDAQRQAVEGMKPFFGVQAGDLFIATTGYTGEAGYEIAMPNEQAADFWRGLLDAGVKPCGLGARDTLRLEAGMNLYGQEMDEGVSPLAANMGWTIAWEPADRNFIGREALEMQREKGTEQLVGLVMTEKGVLRGGLPVRFTDSDGNQKEGIITSGTFSPTLGYSIALARVPAGIGDTAVVQIRNREMPVKVTKPGFVRNGKAIV
>NZ_CP045870.1|WP_032709114.1|3396115_3397318_+|FAD-dependent-2-octaprenylphenol-hydroxylase
MQSVDVAIVGGGMVGLAVACGLQGSGLRVAVLEQAAPQPLDADAPPALRVSAINAASEKLLDKLGVWSEIIAQRASCYHGMEVWDKDSFGRISFDDQSMGFSHLGHIIENAVVHHALWQKAQRCADVTLLAPAQLQQVAWGENEAFLSLQDGSMLTARLVVGADGANSWLRNKADIPLTFWDYRHHALVATIQTTEPHQAVARQAFHGEGILAFLPLSDPHLCSIVWSLSPEEAQRMQQADAAAFNQALNIAFDNRLGLCQLESDRQVFPLTGRYARQFAAHRLALVGDAAHTIHPLAGQGVNLGFMDAAELIDELKRLHAQGKDIGQHLYLRRYERSRKHSAALMLAGMQGFREMFSGSHPAKKLLRDMGLKLADSLPGVKPQLIRQAMGLNDLPAWLR
>NZ_CP045870.1|WP_015369778.1|3394926_3396105_+|2-octaprenyl-6-methoxyphenyl-hydroxylase
MSVLIVGGGMTGATLALAISRMTGGALPVHLIEAQDPASSRHPGFDDRAIALAAGTCQQLARIGIWQNLAKRATPIQRVHVSDRGHAGFVNLAAADYGLSALGQVVELHDVGQRLFSLLREAPGVTLHCPAKVEAVNRSQDSVSLTLDSGETINGKLLVAADGSRSSLGARCGISWQQQPYEQLAIIANVSTALPHEGRAFERFTEHGPLAMLPMSQGRCSLVWCHPQSRRDEVLSWSDERFCQQLQQAFGWRLGRITHAGKRSVYPLALTTAIRSVSHRLALVGNAAQTLHPIAGQGFNLGLRDVMSLAELLADAHGLGEDVGNYSLLCRYQARRADDKAATIGVTDGLVHLFANRWAPLVAGRNVGLMAMELFTPARDALAQRTLGWVPR
>NZ_CP045870.1|WP_032709116.1|3393613_3394930_+|Xaa-Pro-aminopeptidase
MTQQEFLSRRQALLAQMQPGSAALIFAAPEAVRSADSEYPYRQNSDFWYFTGFNEPEALLVLIKSDETHNHSVLFNRVRDLTAEIWFGRRLGQDAAPGKLGVDRALAFSEINQQLYQLLNGLDAIYFAQGEYAYADEIVFNALEKLRKGSRQNLQAPNSVIDWRPVVHEMRLFKSAEELEVMRRAGEISALAHTRAMEKCRPGMFEYQLEGEILHEFNRHGARFPSYNTIVGGGENACILHYTENESELRDGDLVLIDAGCEYRGYAGDITRTFPVNGKFSKPQREIYDIVLESLETALELYRPGTSIYEVNQEVVRIMITGLVRLGILKGEIDELIANNAHRPYFMHGLSHWLGLDVHDVGNYDTDRSRVLEPGMVLTVEPGLYIATDADVPAQYRGIGIRIEDDIVITEDGNENLTASVVKKADEIEALMAAARQS
>NZ_CP045870.1|WP_015703432.1|3393009_3393588_+|YecA-family-protein
MSIQNEMPGYNDVDQLLNQQGVGLTPAEMHGLISGILCGGNTDSSWQPLVHDLTNEGLAFGHELAQALRSMHSATSDSLEDDGFLFQLYMPEGDNVSVFDRADALAGWVNHFLLGLGVTQPKLDKVKDETGEAIDDLRNIAQLGYDEDEDQEELEMSLEEIIEYVRVAALLCHDTFARQQPTAPEVRKPTLH
>NZ_CP045870.1|WP_004205298.1|3392513_3392843_-|cell-division-protein-ZapA
MSAQPVDLQIFGRSLRVNCPPEQRDALNQAAEDLNQRLQDLKERTRVTNTEQLVFIAALNISYELTQEKAKTRDYASSMEQRIRMLQQTIEQALLEQGRISERPGSKFE
>NZ_CP045870.1|WP_020077968.1|3391592_3392189_-|5-formyltetrahydrofolate-cyclo-ligase
MTIQPDIPLSRQQIRQQIRERRRALSAEQQQRFALQAAERMMAYPPVVLAHTVALFLSFDGELDTQPLIEQLWRAGKRVYLPVLHPFSPGNLLFLHYHPQSQLIFNRLKIYEPRLDVRDVLPLAELDVLITPLVAFDASGQRLGMGGGFYDRTLQNWRQYRLQPVGYAHDCQQVDTLPSEQWDIPLPAVITPGKTWRW
>NZ_CP045870.1|WP_032709111.1|3403252_3403756_-|protein-disulfide-oxidoreductase
MASKIRRWLRELAVWLLIGAAVSLAVDYFRQPALPQNFSATSLQTLDGRTLDLNAMSQQKPLLLYVWATWCGVCRYTTPSVASLAADGGNVLTVALRSGDNAALEKWLTRKKMTLPTVNDPSGQLARQWDIQVTPTLVVISQGEVKSVTTGWTSSWGMRLRLWLASW
>NZ_CP045870.1|WP_015703425.1|3403745_3404357_-|thioredoxin-domain-containing-protein
MRAITALLLLCVSAFSFAAPAEEPQSNGNDQLAQLLFNDPNSPRTGAKEPKLTIVSFTDYNCPYCKQFDPMLEKIVHDNPDIQLIVKLLPFKGQSSVNAAKAALSTWRQQPDKFWALHQRLMAKKGYHDDASIAAAQKKTATDSVNIDDKTMDSLKMNLILSQVLNIQGTPATIIGDQMVAGAIPAEELEGLVKEQLAKARGQ
>NZ_CP045870.1|WP_032709110.1|3404358_3406368_-|protein-disulfide-reductase
MFMVFRRLLVCLLWLWLPVSQAADSGWLRVADNQHASVRLRAQSESNGDTRLLLDVALEKGWKTYWRSPGEGGIAPAIAWRTPLEVNWRWPTPQRFDVAGISTQGYHGDVSFPMTLRGKIPPTLSGVLTLSTCSNVCILTDYPFSLDMTAPAGERFNYDFTRAMGTLPLRDGLTSALSASYVSGKLTVTARRDAGWQQPALFIDSMEDVDFGKPSFTSRGDTLTATVPVTDSWGEAAPDLSGKTLSLVLADSGQAQESHIAIAAGSAAPGLALGWVLLMALAGGLILNVMPCVLPVLAMKLGSLVQTERRERGAVRRQFLASVCGIVVSFLALALMMTALRLGNQALGWGIQFQNPWFIGAMALVMVLFSASLLGLFEIRLSSSASTFLATRGGNGLMGHFWQGAFATLLATPCTAPFLGTAVSVALVAPLPLLWGIFFAMGIGMSLPWLLIVAWPGLAQRLPHPGRWMNHLRVVLGLMMLGSALWLVSLLTIHIGRTPVLTLLVILAIGLLLATAWRYRWRTALRAGTLAIVVAGAVAFVAQQDGQGPRRDRVNWQPLSEQAIANALAEHKRVFIDVTADWCVTCKANKYNVLLRDDVQQALSAPDVVALRGDWSRPSADISQFLTARGSAAVPFNQIYGPGLPQGQILPALLDREQLLATLSAAKGK
>NZ_CP045870.1|WP_015369786.1|3406417_3406777_-|copper-resistance-protein
MIKRQRKAILLVLLACLVVLICTAQRMAGMHALVMNVTAASQSAQPGPDNAEAPVSPCELSAKSLMAVPPMLFEGALLAIALLLAVLAAIPPRIERIWPPRVISPPRLRVHLRLCVFRE
>NZ_CP045870.1|WP_032709109.1|3406901_3408335_-|6-phospho-beta-glucosidase
MKKLTLPKDFLWGGAVAAHQVEGGWNKGGKGPSICDVLTGGAHGVPREITQQVEAGKYSPNHEAVDFYGHYKEDIKLFAEMGFKCFRTSIAWTRIFPQGDETQPNEEGLKFYDDMFDELLKYNIEPVITLSHFEMPLHLVQQYGGWTNRKVVDFFVRFAEVVFERYKHKVKYWMTFNEINNQRNWRAPLFGYCCSGVVYTEHENPEETMYQVLHHQFVASALAVKAARRINPEMQVGCMLAMVALYPYSCKPEDVMFAQESMRERYVFTDVQLRGYYPSYVLNEWERRGFNIKMEDGDAQILREGTCAYLGFSYYMTNAVKAEGGTGDAISGFEGSVPNPHVKASDWGWQIDPVGLRYALCELYERYQKPLFIVENGFGAYDKVEADGSINDDYRIDYLRAHVEEMIKAVTYDGVDLMGYTPWGCIDCVSFTTGQYSKRYGFIYVNKHDDGTGDMSRSRKKSFNWYKEVIASNGENL
>NZ_CP045870.1|WP_015369788.1|3408454_3409183_-|MurR/RpiR-family-transcriptional-regulator
MFSHAAVASLNNLEMMVYHYVIKNRDKVMYMTIRELAEAAGVSTTTVLRFCRKLQCEGYSEFRVRFKLYLEQNEPQQANIGASEIMSFFKSVNNDEFDQLLEQAVDIILSSERIIFVGAGTSGALAKYGARFFSNVGKFSNHIDDPYFPVTNDMARNALAIVLSVSGETEEILRFASQFSLHHCRVMSITSHEHSRLAKLADFNLSWHVPQTRIGGVYDITTQIPVIYILESLGRKLARKIG
>NZ_CP045870.1|WP_015703422.1|3409233_3409545_+|ASCH-domain-containing-protein
MQANDITFFQRFQDDILAGRKTITIRDAAESHFKAGDVLRVGRYEDDGYFCTIAVTATSTVTLDTLTEQHAQQENMTLEQLRQVISEIYPAEDRFYVIEFKRL
>NZ_CP045870.1|WP_008806429.1|3409709_3410369_+|hemolysin-III-family-protein
MVRKPLITQGYSLAEEVANSISHGIGLVFGIVGLVLLLVQAVDTNASATAITSYSLYGGSMIMLFLASTLYHAIPHQRAKQWLKKFDHCAIYLLIAGTYTPFLLVGLNSPLAKGLMIVIWSLALLGILFKLTIAHRFKILSLVTYLTMGWLSLIVVYQLAVKLAVGGVTLLAVGGVVYSLGVIFYVCKRIPYNHAIWHGFVLGGSVCHFLAIYLYVGQS
>NZ_CP045870.1|WP_032709108.1|3410467_3411451_-|tRNA-modifying-protein-YgfZ
MAFTPFPPRQPSSSARLPLTLMTLDDWALATITGPDGEKYLQGQITADVSHLTADQHLLAAHCDAKGKMWSNLRVFHRDGGFAWIERRSLRETQLTELKKYAVFSKVTIAANDDLVLLGVAGFQARAALAPLFAALPDAGKPVVTEGVTSLLWFEHPAERFLLVTDADTANRVTEALRGEAQLNNSQQWLALNIEAGLPVIDSVNSAQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWTLAGTASRVPEAGEDLELKMGDNWRRTGTVLAAVQLDDGSLMVQVVMNNDMEPDSVFRVRDDAGSLSIKPLPYSLEED
>NZ_CP045870.1|WP_032709107.1|3411674_3411941_+|FAD-assembly-factor-SdhE
MDINNKARIHWACRRGMRELDISIMPFFEYEYDTLSDDDKRLFIRLLENDDPDLFNWLMNHGKPADTQLQRMINLIQTRNRERGPVAI

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP045870_1	1.1\|939801\|25\|NZ_CP045870\|CRISPRCasFinder	939801-939825	25	NZ_CP045870.1	3524146-3524170	1	0.96

1. spacer 1.1|939801|25|NZ_CP045870|CRISPRCasFinder matches to position: 3524146-3524170, mismatch: 1, identity: 0.96

acaaaaaaacggcaccgcgggtagc	CRISPR spacer
acaaaaaaacggcaccgcgagtagc	Protospacer
*******************.*****

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP045870_1	1.1\|939801\|25\|NZ_CP045870\|CRISPRCasFinder	939801-939825	25	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	324018-324042	0	1.0
NZ_CP045870_1	1.1\|939801\|25\|NZ_CP045870\|CRISPRCasFinder	939801-939825	25	LR134122	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 2	447529-447553	1	0.96
NZ_CP045870_1	1.1\|939801\|25\|NZ_CP045870\|CRISPRCasFinder	939801-939825	25	LR134125	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5	323588-323612	4	0.84
NZ_CP045870_1	1.1\|939801\|25\|NZ_CP045870\|CRISPRCasFinder	939801-939825	25	LR134122	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 2	447690-447714	5	0.8

1. spacer 1.1|939801|25|NZ_CP045870|CRISPRCasFinder matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 0, identity: 1.0

acaaaaaaacggcaccgcgggtagc	CRISPR spacer
acaaaaaaacggcaccgcgggtagc	Protospacer
*************************

2. spacer 1.1|939801|25|NZ_CP045870|CRISPRCasFinder matches to LR134122 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 2) position: , mismatch: 1, identity: 0.96

acaaaaaaacggcaccgcgggtagc	CRISPR spacer
acaaaaaaacggcaccgcgagtagc	Protospacer
*******************.*****

3. spacer 1.1|939801|25|NZ_CP045870|CRISPRCasFinder matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 4, identity: 0.84

acaaaaaaacggcaccgcgggtagc	CRISPR spacer
gacaaaaaacggcaccgcgggtaga	Protospacer
.  *********************

4. spacer 1.1|939801|25|NZ_CP045870|CRISPRCasFinder matches to LR134122 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 2) position: , mismatch: 5, identity: 0.8

acaaaaaaacggcaccgcgggtagc	CRISPR spacer
gacaaaaaacggcaccgcgagtagt	Protospacer
.  ****************.****.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2234 : 43910

Enterobacteria_phage(100.0%)

coat,capsid

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000699010.1\|2234_2477_-\|capsid	phage capsid protein	Q9T0Q8	Enterobacteria_phage	2.1e-07	63.0
WP_108433762.1\|2496_2592_-\|coat	phage coat protein	NA	NA	NA	NA
WP_001734928.1\|2678_2996_-	hypothetical protein	NA	NA	NA	NA
WP_001335098.1\|4225_4408_+	hypothetical protein	NA	NA	NA	NA
WP_000948310.1\|4665_4941_+	hypothetical protein	NA	NA	NA	NA
WP_000378924.1\|6129_6438_-	hypothetical protein	NA	NA	NA	NA
WP_048667010.1\|7775_8870_-	hypothetical protein	A7BJY0	Enterobacteria_phage	3.6e-110	54.4
WP_155961259.1\|8870_9209_-	Head virion protein G6P	D0U172	Enterobacteria_phage	8.7e-07	36.1
WP_080067278.1\|9208_10459_-	attachment protein	D0U161	Enterobacteria_phage	4.2e-06	50.9
WP_000699010.1\|10505_10748_-\|capsid	phage capsid protein	Q9T0Q8	Enterobacteria_phage	2.1e-07	63.0
WP_001734928.1\|10951_11269_-	hypothetical protein	NA	NA	NA	NA
WP_001734927.1\|11280_12333_-	phage/plasmid replication protein, gene II/X family	NA	NA	NA	NA
WP_001335098.1\|12502_12685_+	hypothetical protein	NA	NA	NA	NA
WP_000948310.1\|12942_13218_+	hypothetical protein	NA	NA	NA	NA
WP_080067279.1\|13229_13922_+	hypothetical protein	NA	NA	NA	NA
WP_000378924.1\|14408_14717_-	hypothetical protein	NA	NA	NA	NA
WP_001734931.1\|14786_16052_-	type II/III secretion system protein	A7BJY1	Enterobacteria_phage	2.3e-108	51.2
WP_048667010.1\|16059_17154_-	hypothetical protein	A7BJY0	Enterobacteria_phage	3.6e-110	54.4
WP_001130312.1\|17154_17496_-\|coat	minor coat protein	D0U162	Enterobacteria_phage	2.3e-07	36.1
WP_080067278.1\|17495_18746_-	attachment protein	D0U161	Enterobacteria_phage	4.2e-06	50.9
WP_000699010.1\|18792_19035_-\|capsid	phage capsid protein	Q9T0Q8	Enterobacteria_phage	2.1e-07	63.0
WP_001734928.1\|19238_19556_-	hypothetical protein	NA	NA	NA	NA
WP_001734927.1\|19567_20620_-	phage/plasmid replication protein, gene II/X family	NA	NA	NA	NA
WP_001335098.1\|20789_20972_+	hypothetical protein	NA	NA	NA	NA
WP_000948310.1\|21229_21505_+	hypothetical protein	NA	NA	NA	NA
WP_080067279.1\|21516_22209_+	hypothetical protein	NA	NA	NA	NA
WP_000378924.1\|22695_23004_-	hypothetical protein	NA	NA	NA	NA
WP_001734931.1\|23073_24339_-	type II/III secretion system protein	A7BJY1	Enterobacteria_phage	2.3e-108	51.2
WP_048667010.1\|24346_25441_-	hypothetical protein	A7BJY0	Enterobacteria_phage	3.6e-110	54.4
WP_001130312.1\|25441_25783_-\|coat	minor coat protein	D0U162	Enterobacteria_phage	2.3e-07	36.1
WP_000378924.1\|30994_31303_-	hypothetical protein	NA	NA	NA	NA
WP_001734931.1\|31372_32638_-	type II/III secretion system protein	A7BJY1	Enterobacteria_phage	2.3e-108	51.2
WP_048667010.1\|32645_33740_-	hypothetical protein	A7BJY0	Enterobacteria_phage	3.6e-110	54.4
WP_001130312.1\|33740_34082_-\|coat	minor coat protein	D0U162	Enterobacteria_phage	2.3e-07	36.1
WP_000699010.1\|35380_35623_-\|capsid	phage capsid protein	Q9T0Q8	Enterobacteria_phage	2.1e-07	63.0
WP_001734928.1\|35826_36144_-	hypothetical protein	NA	NA	NA	NA
WP_001734927.1\|36155_37208_-	phage/plasmid replication protein, gene II/X family	NA	NA	NA	NA
WP_001335098.1\|37377_37560_+	hypothetical protein	NA	NA	NA	NA
WP_000948310.1\|37817_38093_+	hypothetical protein	NA	NA	NA	NA
WP_080067279.1\|38104_38797_+	hypothetical protein	NA	NA	NA	NA
WP_000378924.1\|39283_39592_-	hypothetical protein	NA	NA	NA	NA
WP_001734931.1\|39661_40927_-	type II/III secretion system protein	A7BJY1	Enterobacteria_phage	2.3e-108	51.2
WP_048667010.1\|40934_42029_-	hypothetical protein	A7BJY0	Enterobacteria_phage	3.6e-110	54.4
WP_001130312.1\|42029_42371_-\|coat	minor coat protein	D0U162	Enterobacteria_phage	2.3e-07	36.1
WP_080067278.1\|42370_43621_-	attachment protein	D0U161	Enterobacteria_phage	4.2e-06	50.9
WP_000699010.1\|43667_43910_-\|capsid	phage capsid protein	Q9T0Q8	Enterobacteria_phage	2.1e-07	63.0

DBSCAN-SWA_2

212843 : 218288

Escherichia_phage(33.33%)

capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_047062093.1\|212843_213170_-	hypothetical protein	K7PGV5	Enterobacterial_phage	4.6e-21	47.1
WP_050594695.1\|213311_213548_-	DUF4043 family protein	A0A1B1ITP0	uncultured_Mediterranean_phage	5.1e-06	68.3
WP_063445514.1\|213557_214451_-\|capsid	N4-gp56 family major capsid protein	A0A088CC32	Shigella_phage	3.1e-112	66.3
WP_048339342.1\|214490_215216_-	hypothetical protein	A0A096XEU6	Escherichia_phage	4.9e-15	31.2
WP_032707930.1\|215327_215537_-	hypothetical protein	NA	NA	NA	NA
WP_050594694.1\|215826_216768_+	DUF2971 domain-containing protein	NA	NA	NA	NA
WP_050594693.1\|216777_217872_-	hypothetical protein	A0A2R2Z346	Escherichia_phage	8.6e-72	51.3
WP_080687168.1\|218048_218288_-	hypothetical protein	A0A2I7RHT0	Vibrio_phage	1.6e-15	56.1

DBSCAN-SWA_3

1478259 : 1486016

Streptococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032707509.1\|1478259_1478826_+	lipoprotein nlpC	S5MM68	Bacillus_phage	2.2e-10	38.9
WP_015368078.1\|1478889_1479942_-	phosphoporin PhoE	Q1MVN1	Enterobacteria_phage	5.1e-114	59.0
WP_015368077.1\|1480231_1481335_+	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	9.7e-63	40.7
WP_032707507.1\|1481345_1482599_+	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	3.3e-91	45.6
WP_015704509.1\|1483565_1484030_+	membrane protein	A0A218M4J4	Erwinia_phage	4.9e-08	33.3
WP_015704508.1\|1484023_1484350_+	DUF1493 family protein	NA	NA	NA	NA
WP_015704506.1\|1484662_1485289_-	DNA-binding protein	NA	NA	NA	NA
WP_032707506.1\|1485569_1486016_+	hypothetical protein	A0A218M4J4	Erwinia_phage	2.4e-20	37.4

DBSCAN-SWA_4

4230907 : 4240228

Enterobacteria_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032708697.1\|4230907_4231972_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	5.4e-103	54.9
WP_155961202.1\|4231986_4232856_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	3.7e-110	67.0
WP_015706042.1\|4232887_4233778_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	4.0e-27	33.1
WP_015706041.1\|4233789_4234344_+	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	2.3e-52	58.8
WP_015706040.1\|4234518_4235685_+	UDP-glucose 6-dehydrogenase	A0A1J0FA55	Only_Syngen_Nebraska_virus	2.4e-112	53.7
WP_141146421.1\|4235924_4236044_-	small membrane protein	NA	NA	NA	NA
WP_015706039.1\|4236381_4237386_-	NAD-dependent epimerase	E3T4Y8	Cafeteria_roenbergensis_virus	3.4e-30	28.6
WP_015706038.1\|4237382_4237490_-	hypothetical protein	NA	NA	NA	NA
WP_015706037.1\|4238279_4239344_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	1.2e-102	54.9
WP_015706036.1\|4239358_4240228_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	7.5e-111	67.0

DBSCAN-SWA_5

4515673 : 4532015

Pectobacterium_phage(21.43%)

integrase

attL 4505113:4505128|attR 4540552:4540567

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4505113:4505128	attL	NA	NA	NA	NA
WP_015366006.1\|4515673_4516333_-	exodeoxyribonuclease X	A0A0H4IT92	Pseudoalteromonas_phage	7.6e-15	30.1
WP_015366007.1\|4516412_4516643_-	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	3.5e-15	57.4
WP_015366008.1\|4516777_4517152_+	CopC domain-containing protein YobA	NA	NA	NA	NA
WP_032708610.1\|4517155_4518025_+	copper homeostasis membrane protein CopD	NA	NA	NA	NA
WP_015705946.1\|4518038_4518380_+	YebY family protein	NA	NA	NA	NA
WP_032708609.1\|4518771_4519851_-\|integrase	tyrosine-type recombinase/integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	1.3e-96	50.1
WP_071609883.1\|4519825_4520098_-	excisionase	A0A2H4J5E1	uncultured_Caudovirales_phage	1.5e-12	40.9
WP_155953466.1\|4520164_4520557_-	hypothetical protein	NA	NA	NA	NA
WP_032708605.1\|4520586_4521090_-	siphovirus Gp157 family protein	H9C156	Pectobacterium_phage	3.6e-25	44.8
WP_032708604.1\|4521086_4523423_-	hypothetical protein	H9C157	Pectobacterium_phage	1.5e-97	61.9
WP_032708603.1\|4523434_4523731_-	hypothetical protein	NA	NA	NA	NA
WP_071609884.1\|4523760_4524066_-	hypothetical protein	NA	NA	NA	NA
WP_032708600.1\|4524137_4524344_-	cell division protein FtsZ	G8C7T2	Escherichia_phage	1.2e-14	56.2
WP_032708599.1\|4524784_4525192_-	helix-turn-helix domain-containing protein	I6PD69	Cronobacter_phage	2.0e-21	43.5
WP_032708597.1\|4525269_4525497_+	transcriptional regulator	A5VW97	Enterobacteria_phage	4.8e-09	47.5
WP_032708596.1\|4525480_4525906_+	Rha family transcriptional regulator	NA	NA	NA	NA
WP_050594701.1\|4525922_4526345_-	hypothetical protein	Q8W646	Enterobacteria_phage	8.6e-20	40.1
WP_047066337.1\|4526578_4527469_+	hypothetical protein	S4TSR9	Salmonella_phage	1.6e-23	45.8
WP_032708595.1\|4527471_4528221_+	DNA replication protein DnaC	H6WRX8	Salmonella_phage	1.2e-109	76.7
WP_032708594.1\|4528246_4528987_+	hypothetical protein	C7BGF1	Burkholderia_phage	1.2e-53	48.2
WP_155953465.1\|4528983_4529145_+	hypothetical protein	NA	NA	NA	NA
WP_032708540.1\|4531358_4532015_+	protein-serine/threonine phosphatase	K7P6H8	Enterobacteria_phage	9.2e-61	53.7
4540552:4540567	attR	NA	NA	NA	NA

DBSCAN-SWA_6

4564067 : 4615649

Cronobacter_phage(34.0%)

terminase,tail,integrase,bacteriocin,tRNA,head,lysis

attL 4552772:4552787|attR 4586441:4586456

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4552772:4552787	attL	NA	NA	NA	NA
WP_015705925.1\|4564067_4564763_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	NA	NA	NA	NA
WP_015705924.1\|4564801_4565383_+	Slp family lipoprotein	NA	NA	NA	NA
WP_015705923.1\|4565591_4567277_+	long-chain-fatty-acid--CoA ligase FadD	A0A2H4PQM9	Staphylococcus_phage	6.5e-34	26.4
WP_015705922.1\|4567346_4568474_+	ribonuclease D	NA	NA	NA	NA
WP_015366053.1\|4568571_4568841_-	cell division topological specificity factor MinE	NA	NA	NA	NA
WP_015366054.1\|4568844_4569657_-	septum site-determining protein MinD	NA	NA	NA	NA
WP_015366055.1\|4569680_4570382_-	septum site-determining protein MinC	NA	NA	NA	NA
WP_026612271.1\|4570508_4570790_+	hypothetical protein	NA	NA	NA	NA
WP_032705943.1\|4570807_4571467_+	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA
WP_015366058.1\|4571560_4572007_+	YcgN family cysteine cluster protein	NA	NA	NA	NA
WP_047062858.1\|4572033_4573314_-\|integrase	site-specific integrase	A0A0P0ZGT7	Escherichia_phage	9.9e-144	59.0
WP_032708533.1\|4573345_4573594_-	excisionase family protein	S4TND0	Salmonella_phage	6.8e-17	51.9
WP_032708532.1\|4573699_4573936_-	hypothetical protein	G8C7S3	Escherichia_phage	5.6e-29	82.9
WP_032708531.1\|4573937_4574159_-	TraR/DksA family transcriptional regulator	A0A0N7C211	Escherichia_phage	7.4e-15	55.7
WP_071993151.1\|4574177_4574912_-	DNA cytosine methyltransferase	A0A2I7QZY6	Vibrio_phage	6.0e-61	52.7
WP_032708529.1\|4574908_4575568_-	DNA methyltransferase	G8C7S6	Escherichia_phage	5.0e-115	88.1
WP_032708528.1\|4575663_4576368_-	hypothetical protein	A0A088C400	Shewanella_sp._phage	7.9e-26	39.7
WP_032708527.1\|4576380_4577049_-	AAA family ATPase	G9L667	Escherichia_phage	6.9e-48	43.4
WP_032708525.1\|4577050_4577710_-	exodeoxyribonuclease X	A0A1W5PTR6	Pseudoalteromonas_phage	3.5e-20	33.3
WP_155953464.1\|4577693_4577852_-	hypothetical protein	NA	NA	NA	NA
WP_071993150.1\|4577845_4578241_-	hypothetical protein	NA	NA	NA	NA
WP_015705909.1\|4578315_4578522_-	phage encoded cell division inhibitor protein	K7P6H3	Enterobacteria_phage	2.5e-25	76.5
WP_032708523.1\|4578520_4578745_+	hypothetical protein	NA	NA	NA	NA
WP_032709994.1\|4579083_4579836_-	LexA family transcriptional regulator	A0A286S2B2	Klebsiella_phage	4.5e-72	63.1
WP_015705907.1\|4579877_4580111_+	antirepressor	A0A0P0ZDD7	Stx2-converting_phage	1.3e-17	61.0
WP_032708521.1\|4580127_4580670_+	hypothetical protein	M9NZI6	Enterobacteria_phage	3.9e-81	86.1
WP_032709993.1\|4580855_4581788_+	replication protein	A0A077KB11	Edwardsiella_phage	5.3e-54	77.0
WP_032708520.1\|4581784_4582486_+	Replication protein P	A0A0M3ULE2	Salmonella_phage	6.1e-103	80.0
WP_032708519.1\|4582482_4582776_+	protein ren	M1FPD5	Enterobacteria_phage	5.8e-23	59.1
WP_032708518.1\|4583374_4584127_+	hypothetical protein	M1FN76	Enterobacteria_phage	1.9e-126	85.6
WP_032708517.1\|4584137_4584380_+	hypothetical protein	NA	NA	NA	NA
WP_080687174.1\|4584578_4585721_+\|tail	tail fiber domain-containing protein	A0A1Z1LXX7	Serratia_phage	5.7e-18	29.0
WP_050594699.1\|4585821_4587900_+	hypothetical protein	NA	NA	NA	NA
4586441:4586456	attR	NA	NA	NA	NA
WP_015705898.1\|4587899_4588160_+\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_032708515.1\|4588253_4588439_+	hypothetical protein	NA	NA	NA	NA
WP_015705897.1\|4588635_4589085_+	recombination protein NinB	Q8VNP6	Enterobacteria_phage	2.6e-35	50.7
WP_015705896.1\|4589077_4589443_+	RusA family crossover junction endodeoxyribonuclease	K7PM48	Enterobacteria_phage	7.4e-52	83.1
WP_015705894.1\|4589439_4589556_+	hypothetical protein	NA	NA	NA	NA
WP_015705893.1\|4589552_4590242_+	antitermination protein	I6PDF8	Cronobacter_phage	2.5e-61	56.3
WP_032708513.1\|4590315_4590603_-	hypothetical protein	NA	NA	NA	NA
WP_015705891.1\|4590780_4590876_+	hypothetical protein	NA	NA	NA	NA
WP_032141950.1\|4591018_4591339_+	hypothetical protein	H6WRZ3	Salmonella_phage	3.7e-39	79.0
WP_080687173.1\|4591316_4591844_+	lysozyme	I6PBN2	Cronobacter_phage	4.5e-50	64.0
WP_032708512.1\|4591855_4592455_-	hypothetical protein	NA	NA	NA	NA
WP_032708511.1\|4592542_4593004_+\|lysis	lysis protein	M9NYX9	Enterobacteria_phage	5.1e-42	62.1
WP_032708509.1\|4593280_4593826_+	KilA-N domain-containing protein	A0A2H4FQV0	Salmonella_phage	4.1e-46	56.8
WP_032722525.1\|4593940_4594186_+	DUF2560 family protein	A0A286N2R1	Klebsiella_phage	1.1e-30	88.9
WP_032708505.1\|4594282_4594591_+	hypothetical protein	Q5QF73	Pseudomonas_virus	8.5e-17	56.4
WP_032708503.1\|4594587_4594854_+	hypothetical protein	NA	NA	NA	NA
WP_032708501.1\|4595229_4595481_-	hypothetical protein	NA	NA	NA	NA
WP_032708499.1\|4595510_4596026_+\|terminase	terminase small subunit	I6PDJ6	Cronobacter_phage	9.7e-66	75.3
WP_032708497.1\|4596025_4597501_+\|terminase	terminase	A0A1W6JNY3	Morganella_phage	9.4e-255	84.5
WP_015705881.1\|4597511_4598978_+	DUF1073 domain-containing protein	F1C5D7	Cronobacter_phage	1.3e-155	60.8
WP_032722524.1\|4598913_4599909_+\|head	phage head morphogenesis protein	F1C5D8	Cronobacter_phage	4.1e-113	68.0
WP_032708495.1\|4599937_4600363_+	hypothetical protein	NA	NA	NA	NA
WP_032708494.1\|4600424_4601618_+	DUF2213 domain-containing protein	F1C5D9	Cronobacter_phage	1.4e-91	49.3
WP_032708492.1\|4601621_4602062_+	hypothetical protein	F1C5E0	Cronobacter_phage	1.2e-43	65.1
WP_032708490.1\|4602073_4603150_+	hypothetical protein	F1C5E1	Cronobacter_phage	6.3e-160	77.4
WP_032708489.1\|4603159_4603561_+	hypothetical protein	NA	NA	NA	NA
WP_032708488.1\|4603563_4603944_+	hypothetical protein	F1C5E2	Cronobacter_phage	5.9e-28	53.7
WP_032708487.1\|4603943_4604117_+	hypothetical protein	Q5G8X7	Enterobacteria_phage	3.4e-15	60.7
WP_032708486.1\|4604116_4604464_+	hypothetical protein	G0ZNE2	Cronobacter_phage	2.3e-34	61.7
WP_032708485.1\|4604466_4604907_+	hypothetical protein	A0A1V0E5P5	Salmonella_phage	8.9e-36	53.2
WP_032708483.1\|4604903_4605293_+	hypothetical protein	G0ZNE4	Cronobacter_phage	2.5e-37	54.7
WP_032708481.1\|4605361_4606114_+	Ig domain-containing protein	G0ZNE6	Cronobacter_phage	3.6e-45	42.6
WP_032708480.1\|4606165_4606864_+	hypothetical protein	G0ZNE7	Cronobacter_phage	3.5e-66	54.5
WP_150546835.1\|4607496_4608123_+	hypothetical protein	A0A0M4R2T6	Salmonella_phage	2.5e-31	43.0
WP_050594706.1\|4608164_4608584_-	hypothetical protein	A0A077K9U2	Edwardsiella_phage	5.7e-16	41.3
WP_032708473.1\|4608777_4609107_+	hypothetical protein	A0A222YZ97	Escherichia_phage	1.2e-21	54.9
WP_032708472.1\|4609149_4611798_+	tape measure protein	A0A1B1W284	Salmonella_phage	1.1e-104	42.4
WP_015705860.1\|4611897_4612317_+	hypothetical protein	F1C5F0	Cronobacter_phage	8.2e-39	59.1
WP_032708469.1\|4612316_4612787_+	hypothetical protein	F1C5F1	Cronobacter_phage	1.8e-26	38.6
WP_032708467.1\|4612783_4613179_+	C40 family peptidase	F1C5F2	Cronobacter_phage	1.0e-35	53.2
WP_032708466.1\|4613165_4615649_+	MoaD/ThiS family protein	F1C5A7	Cronobacter_phage	7.7e-201	45.5

DBSCAN-SWA_7

4655135 : 4755998

107

Escherichia_phage(11.11%)

terminase,portal,capsid,integrase,tail,tRNA,head,plate,lysis

attL 4646249:4646263|attR 4687772:4687786

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4646249:4646263	attL	NA	NA	NA	NA
WP_032708445.1\|4655135_4656479_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_020078499.1\|4656475_4657141_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_032708444.1\|4657137_4658820_+	OmpA family protein	NA	NA	NA	NA
WP_032708442.1\|4659020_4661399_+	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	4.9e-19	32.1
WP_032708441.1\|4661438_4661696_+	PAAR domain-containing protein	NA	NA	NA	NA
WP_072201304.1\|4661806_4662853_+	hypothetical protein	NA	NA	NA	NA
WP_032708438.1\|4662855_4663614_+	DUF4123 domain-containing protein	NA	NA	NA	NA
WP_032708437.1\|4663670_4664243_+	DUF3304 domain-containing protein	NA	NA	NA	NA
WP_032708436.1\|4664215_4664656_+	hypothetical protein	NA	NA	NA	NA
WP_032708435.1\|4664802_4665375_+	DUF3304 domain-containing protein	NA	NA	NA	NA
WP_072205240.1\|4665347_4667378_+	DUF2235 domain-containing protein	NA	NA	NA	NA
WP_015705815.1\|4667594_4668164_+	DUF3304 domain-containing protein	NA	NA	NA	NA
WP_080687171.1\|4668136_4669807_+	DUF2235 domain-containing protein	NA	NA	NA	NA
WP_032708433.1\|4670008_4670578_+	DUF3304 domain-containing protein	NA	NA	NA	NA
WP_032708432.1\|4670550_4671000_+	hypothetical protein	NA	NA	NA	NA
WP_032708430.1\|4671142_4671715_+	DUF3304 domain-containing protein	NA	NA	NA	NA
WP_032708429.1\|4671687_4672137_+	hypothetical protein	NA	NA	NA	NA
WP_015705817.1\|4672283_4672853_+	DUF3304 domain-containing protein	NA	NA	NA	NA
WP_032708428.1\|4677946_4679065_-\|integrase	tyrosine-type recombinase/integrase	Q77Z02	Phage_21	9.7e-87	46.6
WP_071993664.1\|4679039_4679303_-	excisionase	NA	NA	NA	NA
WP_125942107.1\|4679370_4680864_-	exonuclease	K7PLW7	Enterobacteria_phage	5.7e-58	58.8
WP_032708427.1\|4681971_4682268_-	hypothetical protein	NA	NA	NA	NA
WP_032708426.1\|4682437_4682632_-	DUF1482 family protein	NA	NA	NA	NA
WP_032708425.1\|4683128_4683443_+	hypothetical protein	NA	NA	NA	NA
WP_032708424.1\|4683757_4684138_-	helix-turn-helix domain-containing protein	K7PH71	Enterobacterial_phage	9.5e-18	54.7
WP_032707014.1\|4684245_4684461_+	helix-turn-helix transcriptional regulator	A0A077K9X2	Edwardsiella_phage	6.5e-16	59.1
WP_032708423.1\|4684463_4685018_+	hypothetical protein	NA	NA	NA	NA
WP_032708422.1\|4685069_4686053_+	hypothetical protein	A0A0U2RT81	Escherichia_phage	9.9e-43	54.0
WP_032708421.1\|4686045_4686510_+	replication protein	A0A0U2JGJ0	Escherichia_phage	3.4e-62	70.2
WP_032709977.1\|4686559_4686811_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_032708420.1\|4686813_4687167_+	hypothetical protein	NA	NA	NA	NA
WP_032708419.1\|4687159_4687843_+	hypothetical protein	A0A077KCB2	Edwardsiella_phage	4.9e-57	51.0
4687772:4687786	attR	NA	NA	NA	NA
WP_032708418.1\|4687839_4688187_+	hypothetical protein	NA	NA	NA	NA
WP_032709976.1\|4688195_4688453_+	hypothetical protein	NA	NA	NA	NA
WP_032708415.1\|4689797_4690127_+	hypothetical protein	K7PGV5	Enterobacterial_phage	1.9e-27	61.9
WP_015367395.1\|4690279_4690513_+	DinI family protein	K7PM44	Enterobacteria_phage	2.3e-27	74.0
WP_080687183.1\|4690524_4690815_+	hypothetical protein	H6WRY6	Salmonella_phage	5.2e-16	56.9
WP_032708413.1\|4690855_4691248_+	DNA-binding protein	NA	NA	NA	NA
WP_032708410.1\|4691447_4692479_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	1.5e-94	49.6
WP_032709973.1\|4692492_4693095_+	hypothetical protein	H9C175	Pectobacterium_phage	1.9e-81	72.3
WP_032708408.1\|4693319_4693748_-	hypothetical protein	NA	NA	NA	NA
WP_032708407.1\|4693797_4694085_-	hypothetical protein	NA	NA	NA	NA
WP_032708406.1\|4694252_4694501_+\|lysis	lysis protein	A0A127KNH9	Pseudomonas_phage	1.1e-06	35.1
WP_032708404.1\|4694502_4695036_+	lysozyme	G9L6J6	Escherichia_phage	2.6e-82	82.6
WP_047063229.1\|4695071_4695440_+	hypothetical protein	Q8SBD9	Shigella_phage	2.8e-19	53.1
WP_047062110.1\|4695687_4696212_-	hypothetical protein	NA	NA	NA	NA
WP_032708400.1\|4696444_4697083_+	hypothetical protein	NA	NA	NA	NA
WP_032708399.1\|4697334_4697916_+	hypothetical protein	NA	NA	NA	NA
WP_032708397.1\|4697857_4699984_+\|terminase	terminase	A0A0C5ABH4	Bacteriophage	2.3e-97	34.3
WP_000483310.1\|4699992_4700256_+\|head,tail	phage head-tail adapter protein	NA	NA	NA	NA
WP_032708394.1\|4700255_4701890_+\|portal	phage portal protein	A0A291AUL8	Sinorhizobium_phage	3.1e-89	35.2
WP_021543305.1\|4701886_4702753_+	S49 family peptidase	A0A248XD65	Klebsiella_phage	1.4e-48	48.1
WP_048339353.1\|4702754_4703345_+	hypothetical protein	NA	NA	NA	NA
WP_032708392.1\|4703344_4703752_+\|head	head decoration protein	NA	NA	NA	NA
WP_021543308.1\|4703850_4704900_+\|capsid	major capsid protein	V5Q8G6	Xylella_phage	1.2e-51	34.0
WP_032708390.1\|4704871_4705282_+	hypothetical protein	NA	NA	NA	NA
WP_032708389.1\|4705286_4705646_+	hypothetical protein	NA	NA	NA	NA
WP_032708387.1\|4705642_4706188_+	hypothetical protein	NA	NA	NA	NA
WP_032708386.1\|4706190_4706376_+	DUF2635 domain-containing protein	NA	NA	NA	NA
WP_032708384.1\|4706372_4707884_+\|tail	tail protein	B5TK67	Pseudomonas_phage	8.2e-105	45.0
WP_000896639.1\|4707887_4708259_+\|tail	phage tail protein	NA	NA	NA	NA
WP_032708383.1\|4708260_4708539_+\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_032708382.1\|4708680_4710534_+	hypothetical protein	A0A172JGI1	Citrobacter_phage	9.0e-21	44.5
WP_032708381.1\|4710582_4711983_+	hypothetical protein	B5TAA5	Burkholderia_phage	3.4e-12	22.9
WP_032708380.1\|4711979_4713065_+\|tail	tail protein	Q8SBG7	Shigella_phage	2.0e-36	29.8
WP_032708379.1\|4713061_4713643_+\|plate	phage baseplate assembly protein	A0A077KAY0	Edwardsiella_phage	1.7e-05	40.3
WP_032708378.1\|4713639_4714089_+	hypothetical protein	A0A0C4UR04	Shigella_phage	2.5e-17	42.1
WP_032708377.1\|4714078_4715227_+\|plate	baseplate J/gp47 family protein	J9QE72	Clostridium_phage	2.2e-09	28.5
WP_032708376.1\|4715223_4715901_+	YmfQ family protein	NA	NA	NA	NA
WP_032708375.1\|4715925_4716795_+	hypothetical protein	NA	NA	NA	NA
WP_071993662.1\|4716827_4717850_-	acyltransferase family protein	A0A0F6TJ51	Escherichia_coli_O157_typing_phage	3.7e-32	30.8
WP_047070050.1\|4718074_4720111_+	hypothetical protein	A0A286S1P0	Klebsiella_phage	3.4e-37	27.6
WP_047070052.1\|4720120_4720912_+	hypothetical protein	NA	NA	NA	NA
WP_032708373.1\|4722181_4723942_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_032708372.1\|4723905_4724991_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_032708371.1\|4724968_4725508_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_015366112.1\|4725600_4726866_-	Y-family DNA polymerase	I6RSM4	Salmonella_phage	5.8e-197	79.9
WP_032709968.1\|4726868_4727288_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	6.5e-36	60.6
WP_015366117.1\|4727941_4730158_+	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	6.1e-48	30.0
WP_015366118.1\|4730170_4731724_+	hypothetical protein	NA	NA	NA	NA
WP_015366119.1\|4731720_4731849_+	hypothetical protein	NA	NA	NA	NA
WP_032708369.1\|4731859_4735963_+	type IV secretion protein Rhs	A0A2H4JFP5	uncultured_Caudovirales_phage	7.6e-36	43.1
WP_015366121.1\|4735969_4736464_+	hypothetical protein	NA	NA	NA	NA
WP_032708367.1\|4736527_4737127_-	DUF4291 domain-containing protein	NA	NA	NA	NA
WP_032708366.1\|4738188_4738503_+	hypothetical protein	NA	NA	NA	NA
WP_101739556.1\|4739733_4739820_+	hypothetical protein	NA	NA	NA	NA
WP_032708364.1\|4739836_4740358_+	SMI1/KNR4 family protein	NA	NA	NA	NA
WP_032708363.1\|4740585_4741011_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_032708362.1\|4741353_4742382_-	diguanylate cyclase	NA	NA	NA	NA
WP_032708361.1\|4742597_4743008_+	hypothetical protein	NA	NA	NA	NA
WP_015366127.1\|4743083_4743512_+	hypothetical protein	NA	NA	NA	NA
WP_032708360.1\|4743555_4745340_-	diguanylate cyclase	A0A127AWB9	Bacillus_phage	9.0e-18	36.1
WP_032708359.1\|4745414_4746602_-	HD domain-containing protein	NA	NA	NA	NA
WP_015366130.1\|4747521_4748436_+	kdo(2)-lipid IV(A) palmitoleoyltransferase	A0A1W6JP29	Morganella_phage	2.9e-73	50.4
WP_015705795.1\|4748527_4749166_+	leucine efflux protein LeuE	NA	NA	NA	NA
WP_015366132.1\|4749280_4749544_+	DUF2534 family protein	NA	NA	NA	NA
WP_072201265.1\|4749592_4749712_-	hypothetical protein	NA	NA	NA	NA
WP_100279139.1\|4749845_4749920_-	protein YoaJ	NA	NA	NA	NA
WP_015705794.1\|4749919_4750021_-	YoaK family small membrane protein	NA	NA	NA	NA
WP_032708358.1\|4750068_4751091_-	diguanylate cyclase	A0A249XXD1	Clostridium_phage	8.5e-05	29.0
WP_015366135.1\|4751383_4751632_+	DUF333 domain-containing protein	NA	NA	NA	NA
WP_032709964.1\|4751642_4751990_-	DUF488 domain-containing protein	NA	NA	NA	NA
WP_032708321.1\|4752130_4752823_+	CTP synthase	NA	NA	NA	NA
WP_032708320.1\|4752856_4754038_-	CynX/NimT family MFS transporter	NA	NA	NA	NA
WP_015366139.1\|4754138_4754930_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_015705789.1\|4754913_4755360_-	DUF441 domain-containing protein	NA	NA	NA	NA
WP_020078533.1\|4755497_4755998_-\|tRNA	YbaK/prolyl-tRNA synthetase associated domain-containing protein	NA	NA	NA	NA

DBSCAN-SWA_8

5232292 : 5289250

Enterobacteria_phage(100.0%)

coat,capsid,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032708041.1\|5232292_5233450_-\|tail	tail fiber assembly protein	NA	NA	NA	NA
WP_032708040.1\|5233451_5236169_-	fimbrial protein	NA	NA	NA	NA
WP_015366620.1\|5236243_5236750_-	fimbrial protein	NA	NA	NA	NA
WP_032708039.1\|5236826_5237576_-	fimbrial protein	NA	NA	NA	NA
WP_015705401.1\|5237876_5238632_+	transcriptional regulator	NA	NA	NA	NA
WP_015705400.1\|5238628_5239105_+	hypothetical protein	NA	NA	NA	NA
WP_020078793.1\|5239172_5239790_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_032708038.1\|5239801_5242909_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA
WP_032708037.1\|5242925_5243186_-	hypothetical protein	NA	NA	NA	NA
WP_015705397.1\|5243297_5243750_-	polyketide cyclase	NA	NA	NA	NA
WP_020078795.1\|5244232_5245036_-	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
WP_063445476.1\|5245051_5245762_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_032708034.1\|5245796_5246825_-	aldo/keto reductase	NA	NA	NA	NA
WP_020078799.1\|5246827_5247400_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
WP_032708032.1\|5247550_5248585_-	amidohydrolase	NA	NA	NA	NA
WP_032708031.1\|5248687_5249635_-	aldo/keto reductase	NA	NA	NA	NA
WP_032708030.1\|5249719_5250409_-	type 1 glutamine amidotransferase domain-containing protein	NA	NA	NA	NA
WP_032708028.1\|5250417_5250726_-	hypothetical protein	NA	NA	NA	NA
WP_020078803.1\|5250865_5251765_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_020078804.1\|5251801_5252710_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_032708025.1\|5252922_5253909_+	aldo/keto reductase	NA	NA	NA	NA
WP_072201335.1\|5253898_5255137_+	aldo/keto reductase	NA	NA	NA	NA
WP_015366641.1\|5255254_5256292_-	aldo/keto reductase	NA	NA	NA	NA
WP_020078806.1\|5256456_5256666_-	hypothetical protein	NA	NA	NA	NA
WP_015705382.1\|5256687_5257647_-	LacI family transcriptional regulator	NA	NA	NA	NA
WP_032708023.1\|5257724_5258630_-	ROK family protein	NA	NA	NA	NA
WP_015705380.1\|5258673_5258988_-	hypothetical protein	NA	NA	NA	NA
WP_015366646.1\|5259012_5260335_-	PTS sugar transporter subunit IIC	NA	NA	NA	NA
WP_015705379.1\|5260349_5260661_-	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_032708022.1\|5260830_5262102_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA
WP_015366649.1\|5262310_5263648_+	carbohydrate porin	NA	NA	NA	NA
WP_032708021.1\|5263659_5265855_+	beta-1,4 mannanase	NA	NA	NA	NA
WP_032708020.1\|5265903_5267322_+	glycoside hydrolase family 1 protein	NA	NA	NA	NA
WP_000378924.1\|5268038_5268347_-	hypothetical protein	NA	NA	NA	NA
WP_001734931.1\|5268416_5269682_-	type II/III secretion system protein	A7BJY1	Enterobacteria_phage	2.3e-108	51.2
WP_001130312.1\|5270785_5271127_-\|coat	minor coat protein	D0U162	Enterobacteria_phage	2.3e-07	36.1
WP_080067278.1\|5271126_5272377_-	attachment protein	D0U161	Enterobacteria_phage	4.2e-06	50.9
WP_000699010.1\|5272423_5272666_-\|capsid	phage capsid protein	Q9T0Q8	Enterobacteria_phage	2.1e-07	63.0
WP_001734928.1\|5272869_5273187_-	hypothetical protein	NA	NA	NA	NA
WP_001734927.1\|5273198_5274251_-	phage/plasmid replication protein, gene II/X family	NA	NA	NA	NA
WP_001335098.1\|5274420_5274603_+	hypothetical protein	NA	NA	NA	NA
WP_000948310.1\|5274860_5275136_+	hypothetical protein	NA	NA	NA	NA
WP_080067279.1\|5275147_5275840_+	hypothetical protein	NA	NA	NA	NA
WP_000378924.1\|5276326_5276635_-	hypothetical protein	NA	NA	NA	NA
WP_001734931.1\|5276704_5277970_-	type II/III secretion system protein	A7BJY1	Enterobacteria_phage	2.3e-108	51.2
WP_048667010.1\|5277977_5279072_-	hypothetical protein	A7BJY0	Enterobacteria_phage	3.6e-110	54.4
WP_001130312.1\|5279072_5279414_-\|coat	minor coat protein	D0U162	Enterobacteria_phage	2.3e-07	36.1
WP_080067278.1\|5279413_5280664_-	attachment protein	D0U161	Enterobacteria_phage	4.2e-06	50.9
WP_000699010.1\|5280710_5280953_-\|capsid	phage capsid protein	Q9T0Q8	Enterobacteria_phage	2.1e-07	63.0
WP_001734928.1\|5281156_5281474_-	hypothetical protein	NA	NA	NA	NA
WP_001734927.1\|5281485_5282538_-	phage/plasmid replication protein, gene II/X family	NA	NA	NA	NA
WP_001335098.1\|5282707_5282890_+	hypothetical protein	NA	NA	NA	NA
WP_000948310.1\|5283148_5283424_+	hypothetical protein	NA	NA	NA	NA
WP_000170730.1\|5284619_5284862_-	hypothetical protein	NA	NA	NA	NA
WP_000699010.1\|5289007_5289250_-\|capsid	phage capsid protein	Q9T0Q8	Enterobacteria_phage	2.1e-07	63.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP045870

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection