CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP046327	Clostridioides difficile strain FDAARGOS_723 chromosome, complete genome	16 crisprs	cas3,cas6,cas7,cas5,DEDDh,WYL,cas14k,csa3,cas14j,DinG,cas8b2,cas4,cas1,cas2	6	45	9	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP046327_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046327_1

29310-29635

Orphan

Consensus_repeat	Method
ACAGGATGGCAAGAAATAGATGGTAA	CRISPRCasFinder

5 spacers

The CRISPR arrays of NZ_CP046327_1

>merge|NZ_CP046327|1|29310-29635|CRISPRCasFinder
ACAGGATGGAAAGCAATTAATAACAAAAAATATTATTTAGGAACTGATGGAGCAAGAGTATCTGGATGGAAAGTAATAGACGGAAAAACTTATTACTTTAACTCAGATGGAGTAATGCAAACAGGATGGCAAGAAAAGAATGGAAAGAAATACTATCTAGGATCTGATGGTTTATCAGTAACAGGATGGCAAGAAATAGATGGTAATAAGTATTACTTTGACAAAACAGGAATAATGCAGACAGGATGGCAACAAATAGATGGTAAGTCTTACTATTTAGACAAAGATGGAAAGATGCTAACTGGTTCTCAAAAAATAGATGGGAA

>NZ_CP046327|1|1|29310-29635|CRISPRCasFinder
ACAGGATGGAAAGCAATTAATAACAA	AAAATATTATTTAGGAACTGATGGAGCAAGAGTA
TCTGGATGGAAAGTAATAGACGGAAA	AACTTATTACTTTAACTCAGATGGAGTAATGCAA
ACAGGATGGCAAGAAAAGAATGGAAA	GAAATACTATCTAGGATCTGATGGTTTATCAGTA
ACAGGATGGCAAGAAATAGATGGTAA	TAAGTATTACTTTGACAAAACAGGAATAATGCAG
ACAGGATGGCAACAAATAGATGGTAA	GTCTTACTATTTAGACAAAGATGGAAAGATGCTA
ACTGGTTCTCAAAAAATAGATGGGAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046327.1\|WP_003426384.1\|9906_10611_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP046327.1\|WP_009893714.1\|36046_36910_+\|shikimate-dehydrogenase	unknown	unknown	gnl\|CDD\|183585
NZ_CP046327.1\|WP_009890959.1\|26636_27512_+\|UTP--glucose-1-phosphate-uridylyltransferase-GalU	unknown	unknown	gnl\|CDD\|224131
NZ_CP046327.1\|WP_009890970.1\|12112_13486_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046327.1\|WP_009890955.1\|31821_32703_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176125
NZ_CP046327.1\|WP_003431452.1\|27536_28550_+\|UDP-glucose-4-epimerase-GalE	unknown	unknown	gnl\|CDD\|177883
NZ_CP046327.1\|WP_009890964.1\|20057_20735_-\|sortase-SrtB	unknown	unknown	gnl\|CDD\|320675
NZ_CP046327.1\|WP_004455025.1\|26124_26445_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046327.1\|WP_009890940.1\|42116_43460_-\|NCS2-family-permease	unknown	unknown	gnl\|CDD\|225161
NZ_CP046327.1\|WP_009890947.1\|37109_38327_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340954
NZ_CP046327.1\|WP_074014319.1\|38559_40428_+\|restriction-endonuclease	unknown	unknown	gnl\|CDD\|214906
NZ_CP046327.1\|WP_009890951.1\|34042_35965_+\|NAD(P)-binding-protein	unknown	unknown	gnl\|CDD\|274912
NZ_CP046327.1\|WP_012816330.1\|21478_24022_+\|SPOR-domain-containing-protein	unknown	unknown	gnl\|CDD\|173412
NZ_CP046327.1\|WP_004454160.1\|10603_11926_+\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_CP046327.1\|WP_009890967.1\|13858_14797_-\|delta-lactam-biosynthetic-de-N-acetylase	unknown	unknown	gnl\|CDD\|200572
NZ_CP046327.1\|WP_009893713.1\|43963_44617_+\|pentapeptide-repeat-containing-protein	unknown	unknown	gnl\|CDD\|224276
NZ_CP046327.1\|WP_011861654.1\|30774_31614_+\|DUF3800-domain-containing-protein	unknown	unknown	gnl\|CDD\|173777
NZ_CP046327.1\|WP_009890953.1\|33115_33964_+\|sugar-phosphate-isomerase/epimerase	unknown	unknown	gnl\|CDD\|224007
NZ_CP046327.1\|WP_009890943.1\|40605_41970_-\|amidohydrolase	unknown	unknown	gnl\|CDD\|238623
NZ_CP046327.1\|WP_009893716.1\|24143_26135_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP046327.1\|WP_003426384.1\|9906_10611_+\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	3.65233e-79
NZ_CP046327.1\|WP_074014319.1\|38559_40428_+\|restriction-endonuclease	gnl\|CDD\|214906	smart00910, HIRAN, The HIRAN protein (HIP116, Rad5p N-terminal) is found in the N-terminal regions of the SWI2/SNF2 proteins typified by HIP116 and Rad5p. HIRAN is found as a standalone protein in several bacteria and prophages, or fused to other catalytic domains, such as a nuclease of the restriction endonuclease fold and TDP1-like DNA phosphoesterases, in the eukaryotes. It has been predicted that this protein functions as a DNA-binding domain that probably recognises features associated with damaged DNA or stalled replication forks.	1.40596e-17
NZ_CP046327.1\|WP_009890959.1\|26636_27512_+\|UTP--glucose-1-phosphate-uridylyltransferase-GalU	gnl\|CDD\|224131	COG1210, GalU, UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane].	3.73153e-174
NZ_CP046327.1\|WP_009893714.1\|36046_36910_+\|shikimate-dehydrogenase	gnl\|CDD\|183585	PRK12548, PRK12548, shikimate dehydrogenase.	0
NZ_CP046327.1\|WP_009890955.1\|31821_32703_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176125	cd08434, PBP2_GltC_like, The substrate binding domain of LysR-type transcriptional regulator GltC, which activates gltA expression of glutamate synthase operon, contains type 2 periplasmic binding fold. GltC, a member of the LysR family of bacterial transcriptional factors, activates the expression of gltA gene of glutamate synthase operon and is essential for cell growth in the absence of glutamate. Glutamate synthase is a heterodimeric protein that encoded by gltA and gltB, whose expression is subject to nutritional regulation. GltC also negatively auto-regulates its own expression. This substrate-binding domain has strong homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.24492e-91
NZ_CP046327.1\|WP_003431452.1\|27536_28550_+\|UDP-glucose-4-epimerase-GalE	gnl\|CDD\|177883	PLN02240, PLN02240, UDP-glucose 4-epimerase.	0
NZ_CP046327.1\|WP_009890964.1\|20057_20735_-\|sortase-SrtB	gnl\|CDD\|320675	cd05826, Sortase_B, Sortase domain found in class B sortases. Class B sortases are membrane-bound cysteine transpeptidases broadly distributed in Gram-positive bacteria (mainly present in Firmicutes and Actinobacteria). They can have radically distinct functions. Some members of this group attach haemoproteins to the peptidoglycan of the cell wall, while others assemble pili, which are multi-subunit hair-like fibres that extend from the cell surface to promote microbial adhesion and biofilm formation. In transpeptidation reaction, the surface protein substrate is cleaved at a conserved cell wall-sorting signal (Class B sortases normally recognize the consensus NP[Q/K][T/S][N/G/S][D/A] motif), and covalently linked to peptidoglycan for display on the bacterial surface. The prototypical sortase B protein from Staphylococcus aureus (named Sa-SrtB) cleaves surface protein precursors between threonine and asparagine at a conserved NPQTN motif with subsequent covalent linkage to pentaglycine cross-bridges. It is required for anchoring the heme-iron binding surface protein IsdC to the cell wall envelope. SrtB contains an N-terminal hydrophobic region that functions as a signal peptide/transmembrane domain. At the C terminus, it contains an essential cysteine residue within the catalytic TLXTC signature sequence, where X is usually a serine. Genes encoding SrtB and its targets are generally clustered in the same locus. The prototypical class B sortase involved in pilus biogenesis is pilus-specific sortase C2 from Streptococcus pyogenes (named Sp-SrtC2) that anchors a surface protein containing a QVPTGV motif to the cell wall, as well as polymerizes the major pilin subunit Tee3/FctA and attaches the minor tip pilin Cpa. The linkage of Cpa to Tee3 by SrtC2 requires the VPPTG motif in the cell wall-sorting signal of Cpa. The family also includes SrtB enzymes from Bacillus anthracis (named Ba-SrtB) and Clostridium difficile (named Cd-SrtB). Ba-SrtB is thought to recognize the NPKTG motif, and attaches surface proteins to meso-diaminopimelic acid (mDAP) cross-bridges. Cd-SrtB does not play an essential role in pathogenesis. It cleaves short [SP]PXTG motif-containing peptides between the threonine and glycine residues and then covalently anchors the threonine residue to a nucleophile such as glycine or mDAP, but not to the peptidoglycan of C. difficile, suggesting a novel association of sortase activity with cyclic diGMP (c-diGMP)-mediated regulation to control levels of cell wall anchoring and secretion of putative adhesion molecules.	1.13893e-77
NZ_CP046327.1\|WP_009890940.1\|42116_43460_-\|NCS2-family-permease	gnl\|CDD\|225161	COG2252, COG2252, Xanthine/uracil/vitamin C permease [Nucleotide transport and metabolism].	5.67058e-142
NZ_CP046327.1\|WP_009890947.1\|37109_38327_+\|MFS-transporter	gnl\|CDD\|340954	cd17396, MFS_YdiM_like, Inner membrane transport protein YdiM and similar proteins of the Major Facilitator Superfamily of transporters. This subfamily contains Escherichia coli inner membrane transport proteins YdiM and YdiN, which belong to the bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein 4 (FucP/MFSD4) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	5.59496e-158
NZ_CP046327.1\|WP_012816330.1\|21478_24022_+\|SPOR-domain-containing-protein	gnl\|CDD\|173412	PTZ00121, PTZ00121, MAEBL; Provisional.	0.00011003
NZ_CP046327.1\|WP_009890951.1\|34042_35965_+\|NAD(P)-binding-protein	gnl\|CDD\|274912	TIGR03997, NADH:flavin_oxidoreductase, mycofactocin system FadH/OYE family oxidoreductase 2. The yeast protein called old yellow enzyme and FadH from Escherichia coli (2,4-dienoyl CoA reductase) are enzymes with 4Fe-4S, FMN, and FAD prosthetic groups, and interact with NADPH as well as substrate. Members of this related protein family occur in the vicinity of the putative mycofactocin biosynthesis operon in a number of Actinobacteria such as Frankia sp. and Rhodococcus sp., in Pelotomaculum thermopropionicum SI (Firmicutes), and in Geobacter uraniireducens Rf4 (Deltaproteobacteria). The function of this oxidoreductase is unknown.	4.9183e-143
NZ_CP046327.1\|WP_009890967.1\|13858_14797_-\|delta-lactam-biosynthetic-de-N-acetylase	gnl\|CDD\|200572	cd10948, CE4_BsPdaA_like, Catalytic NodB homology domain of Bacillus subtilis polysaccharide deacetylase PdaA, and its bacterial homologs. The Bacillus subtilis genome contains six polysaccharide deacetylase gene homologs: pdaA, pdaB (previously known as ybaN), yheN, yjeA, yxkH and ylxY. This family is represented by Bacillus subtilis pdaA gene encoding polysaccharide deacetylase BsPdaA, which is a member of the carbohydrate esterase 4 (CE4) superfamily. BsPdaA deacetylates peptidoglycan N-acetylmuramic acid (MurNAc) residues to facilitate the formation of muramic delta-lactam, which is required for recognition of germination lytic enzymes. BsPdaA deficiency leads to the absence of muramic delta-lactam residues in the spore cortex. Like other CE4 esterases, BsPdaA consists of a single catalytic NodB homology domain that appears to adopt a deformed (beta/alpha)8 barrel fold with a putative substrate binding groove harboring the majority of the conserved residues. It utilizes a general acid/base catalytic mechanism involving a tetrahedral transition intermediate, where a water molecule functions as the nucleophile tightly associated to the zinc cofactor.	1.95851e-111
NZ_CP046327.1\|WP_009893713.1\|43963_44617_+\|pentapeptide-repeat-containing-protein	gnl\|CDD\|224276	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown].	6.44346e-16
NZ_CP046327.1\|WP_011861654.1\|30774_31614_+\|DUF3800-domain-containing-protein	gnl\|CDD\|173777	cd01027, TOPRIM_RNase_M5_like, TOPRIM_ RNase M5_like: The topoisomerase-primase (TOPRIM) nucleotidyl transferase/hydrolase domain found in Ribonuclease M5: (RNase M5) and other small primase-like proteins from bacteria and archaea. RNase M5 catalyzes the maturation of 5S rRNA in low G+C Gram-positive bacteria. The TOPRIM domain has two conserved motifs, one of which centers at a conserved glutamate and the other one at two conserved aspartates (DxD). The conserved glutamate may act as a general base in nucleotide polymerization by primases. The DXD motif may co-ordinate Mg2+, a cofactor required for full catalytic function.	0.00111435
NZ_CP046327.1\|WP_009890953.1\|33115_33964_+\|sugar-phosphate-isomerase/epimerase	gnl\|CDD\|224007	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism].	1.91057e-21
NZ_CP046327.1\|WP_009890943.1\|40605_41970_-\|amidohydrolase	gnl\|CDD\|238623	cd01298, ATZ_TRZ_like, TRZ/ATZ family contains enzymes from the atrazine degradation pathway and related hydrolases. Atrazine, a chlorinated herbizide, can be catabolized by a variety of different bacteria. The first three steps of the atrazine dehalogenation pathway are catalyzed by atrazine chlorohydrolase (AtzA), hydroxyatrazine ethylaminohydrolase (AtzB), and N-isopropylammelide N-isopropylaminohydrolase (AtzC). All three enzymes belong to the superfamily of metal dependent hydrolases. AtzA and AtzB, beside other related enzymes are represented in this CD.	1.57313e-172
NZ_CP046327.1\|WP_004454160.1\|10603_11926_+\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	6.0866e-23

>NZ_CP046327.1|WP_003431452.1|27536_28550_+|UDP-glucose-4-epimerase-GalE
MAVLVAGGAGYIGSHTAIELLESGYEVVIVDNLSNSNSIVVDRIKELSKKPVKFYNIDIRNKDEMHVVFKENNIESIIHFAALKAVGESVEKPIEYYSNNLISTLNLFELMREYGVKKFVFSSSATVYGDPHTCPILEDFPLSVTNPYGRTKLMIEQMLVDISKADKSLDIALLRYFNPVGAHKSGRIGEEPNGVPSNLMPYITKIAVGKLKELSVYGNDYPTHDGTGVRDYIHVLDLAAGHVKALQKLEENPGLVVYNLGTGKGYSVLDLVKAFSKASGKEIPYKIVGRRAGDVAMCYADSSKAEKELGWKAKYELEEMCEDSWRWQSMNPNGYEE
>NZ_CP046327.1|WP_009890959.1|26636_27512_+|UTP--glucose-1-phosphate-uridylyltransferase-GalU
MQMTVKKAIIPAAGLGTRFLPATKSQPKEMLPIVDKPTLQYIIEEAIESGIEEILIITGRNKKSIEDHFDKSVELELELEQKGKTEMLEMVRDISNMVNIHYIRQKEPKGLGHAIYCAKSFIGDEPFAVLLGDDIVDSDVPCLKQLIDTYNEYKTTVLGVQKIAKEDTNKYGILDVKHIEDRVYKVKDMVEKPAIEEAPSDIAILGRYIITPAIFSILEKQTPGKGGEIQLTDALQTLGKQEAIYAYNFEGRRYDVGDKIGFLEATIDFALKRENLKDDLMDYMRKKVSEK
>NZ_CP046327.1|WP_004455025.1|26124_26445_+|hypothetical-protein
MSSKYNVWTFNYEFLGLDSGDEKNNEVYYEIDLDEILNENYIDEDIDSGLDSDGNSILGELISEMDIDEDVSVDMTYQELEVDLEDLDSYLDEDIDSDIKGILDEI
>NZ_CP046327.1|WP_009893716.1|24143_26135_+|hypothetical-protein
MLKLGEKIIYELSDGFELSGISRYSKEYKKLHITNLGNIIISKSDEVNEDTGVKYIYSFSDNKEKLEAVLEDSQIIVYGNNLPFYIKSENSSKNVTANLTMKITLDEYDLICKSQREFIFYLKDNMTILSLDDNKFYMGGINKDNEKFIFISGKNRFEINFDDIERYILEDKRVSLKGYFHMEREGIIVRSVSIFNNNIDSVVPSDLNERVKDNQKIGNLPKDCDIVFCKISGNIDGFDYKNTNMLLVKYQDQLIFINKKSKKTIVKSAKDNCSKLNLGEDIILYDNKNVFNLHINDKNREIMQIDDLKDIENEIVGYTLKHAPFFIQEDFDSLTILKSFQKEIISIKNSDIKDIVINKELENENSNFVETEIKFNNQKVLLNLSKNMVQKLMQDVFIYAKQPLLKENSIEVIYKNWSKAMNDMIIFNFFGNIYYMKSEFDKILEKELNDEIRIEVINSLYKQIQEQRNNLDLLSAYMPRILENQEIDLFEKYNTKLDVQVFKQIKNLLSDLSYNISSYLNEVEKSLDNIIFVISGEDKKKYNYRMLKESESASLDVFLKQAISRLNHLVENMYPYYVDETSREMFKLFELLWKNYRNIDDDSIKEILFERITNTYVFKQLTLNNSTKERRKDIIEKIYNSVDYGTNKLDENMFFTGGIKYVK
>NZ_CP046327.1|WP_012816330.1|21478_24022_+|SPOR-domain-containing-protein
MKVLSENNIIRNTVLNVTASFLKQESKINEKLDGVLEKKFEKVEFNEAKYAELLKFNILFYKTLARNTEPLIGKWIVDKYIPEIDELEKDLELTTAKCRKYVNKAMKEGLDSLKANDLNSFLAYDKMELSERRRRLEKDYKVLNLYKDLLNISLRKISLEKKECGDLFLKNQADAKRELKREIIFCVNKILASNKDVVPNNVEENNEQDKVEIKATEIEDLQLGKDNSENDMLLNEIKNSKVKHESKSNDIESKFIDKLNSLNNESISQTIHNEYKKLCGLEELHSVEGYGFGKEIIKDFACATVVLEFLKRRNRDLIEGAMRLTIIGEFGPENFKEFVDYVIKNKTEISEDTWNKAQNLIKDNYSELENHEIASKRTRRNKDIDIEEYIYMIKNADKDICFRSSISIEDDAEEGAKEEVDSNNQDIGDVVEDKDTTDKEYDSNKEDIIEPENKKSKKKAKLFGFIKKDNEEVEQEEENLNDISPDIILDKPVENHQAKSEEIEQNELKEIKQEEPSQHIEEERSVKIEKPINNNLDEKVSSNNESKLEKESKNLEDKKAKEIKEEKLENEKSVVIPIKKKENSNKKSKNSSKDKYRENKKEMKNYVSDKEDSLDDEEVVSKKSRLKETIIAVVIVVIVGVGYFITVGNNKKNDKENIPKSSTQQQANNKLTEEEKKAQAEKEKKEAEEKAKAEKEAQEKAQAEKKAKEMEAYKDGKGVYYTVYAGSLKVEKTAKETAKEYEAKGISSTIIQENGYYKIKIGDYSQYGEAQEKCNELAKKSIDTYIAMYDKYYDYKLEELKESAPSLSAEELKQKYEDLRSELKNKSGYREYVKHLDKLYEEIVEGA
>NZ_CP046327.1|WP_009890964.1|20057_20735_-|sortase-SrtB
MKKLYRIVINIILVLVILYSGFNIYSKLTKYNHDTKTSSELQKKEYKKEDLSKINSDFKFWLSVENTNINYPVVQSKDNSYYLDKDFYKKDSISGTLFMDYRNKSIDDKNIIIYGHNMKNKTMFNNLNKFKDADFFKNNNKIKITLNGKEFLYDVFSAYIVESDYDYLKTNFNNESDYQNYINDITSKSLYKSPIKVNSNDKIVTLSTCTYEFDDARMVIHGRLI
>NZ_CP046327.1|WP_009890967.1|13858_14797_-|delta-lactam-biosynthetic-de-N-acetylase
MFRKVLHYLTLLSISIFFIVGCSNSQNNQNENQNKETQLQEDKEKIDGGKDTSNVIVSDGTDKPSKATTNNDNNKLDVSSLDNTTLDWFYIPNNKHKTPEVNTDIEFKFSDYDALYNGPTKDGQKTLYLTFDEGYENGYTTKILDTLKQNQVKAVFFVTAPYIKENKDLVKRMVSEGHIVGNHSKTHPSMPTKTSNLKNFNDELYDVEKLYKDVTGKDMVKFFRPPMGKYSEKSLAMTKNLGYKTVFWSFAYRDWDTDKQPSHEEATQKIMDNLHDGSILLLHAVSKTSTEILNDFISNARKLGYEFELLEY
>NZ_CP046327.1|WP_009890970.1|12112_13486_+|hypothetical-protein
MVLTGAHYIYILFMVIILITMIMKKDTIVPCILGVFFMGLFFEKNIFGAITAVFNSFIISLNELGPIILIIAIMVALSKALEANNAIQYMVRPFSRVIKNSNTAFFVTGFVMLVLSWFFWPTPAVALVGAVFLPVAMRAGLPAIGVAVALNLFGHGLALSTDFVIQGAPSITAGAAGVAVSYVINDGMILFWVMGIVTISMAFYTLKRDINKGMFREELKGFESEEVEEFNGKSKIATILVALGFLADIIVMYIFDLKGGDASALLGGTAVFLIIIINVINFGKDSLENVCENIIDGFVFGIKIFGAIIPIAAFFYMGEVAPLTGVFGKVLAPGSQGLLSDIGIALSQTIPLNKFAVSGIETVVGAITGLDGSGFSGISLVGSLASVFGTAINASVGALAALGQISGIWVGGGCLVPWGLISAAAICGVSPIELAKRNFVPVITGLVVTTIVAMFII
>NZ_CP046327.1|WP_004454160.1|10603_11926_+|HAMP-domain-containing-histidine-kinase
MINKIKPSKLGVILLIYVVISAAVAFILNIPFYSAVESIVKDVSEGKVYFKREVNQLMDNFQTYVNNNGIRADDGDDIAKWNSDNWFVSMKIYKGNKVFYDTLYYPNEVPDKSEENEFYSSPMARNYEIQFSDIKANIVVVALFRFRFQNFIEAISITFMALTFIITFLLLFSRKIKYLRKIEMGIKIVESGSLKYRIPVKGNDELSSLASSINEMSHTLENQLIKEREMKNKNKDIVTSISHDVRTPLTSVICYLDLIKDHKYNSPEQLEQYIKNVRSKAYQIKDLTDDLFTHFVNSGEEVSKGYEKINANEFIFQLLLDSSYTLEEKGFHITIENELYNQYHIYVDVTQFRRIFDNLCSNIIKYARKDKPIVFLIKVEDSKLLIIQKNRVSNFSKNVESFGIGIKNCEKIVAYHNGSINVNSDDKEFAIEISIPAKES
>NZ_CP046327.1|WP_003426384.1|9906_10611_+|response-regulator-transcription-factor
MNKEIPKKILVADDNPEIREIVEILLTGEGYEVIMATNGEEAVNLVDSTIDLIILDVVMPVKTGFVACNEIREKTTAPILFLTAKTQDSDKVIGFSAGGDDYLSKPFSYSELISRVKSLLRRYYIYQGKEKEREPNILKTKELCVNLDTQDVTLNGEPVFLTTIEYSILILMLKNRKKVFSSENLYETIWDEQYFYTANNTIMVHIRNLRKKLEKDQKNPQYIKTAWGKGYYID
>NZ_CP046327.1|WP_011861654.1|30774_31614_+|DUF3800-domain-containing-protein
MSKIIKKKYIMFIDESGRADINHEDPFTLTGVIFEYKYAVSQGDYVCSLRKEMDAFKEYCFGTSNIGIHLTDISRKSRAFEKFDDSQIKLFYDELPLFLSRLECTIISVTVDKARLKKYYAPSKEPYVVAFIHVLQNFYSFVNNETVESARIVIESRDDVSNLKVQKAFFDVFNNGTIYLDIDEELRDKVKGFIIAKKEDADYREGLEIADILCNPLSRARRGLIEANPKCMQYGEKNKIFKSVRNKIYTPTSVNDIRNWGFKEVPIVEPVGPWLEKMR
>NZ_CP046327.1|WP_009890955.1|31821_32703_-|LysR-family-transcriptional-regulator
MNLYHLRYFVTLAHLEHYTKAAENLSITQPSLSHAISLLENELGVALFEKEGRNIVLTKYGKIFLKDVEKSLEILDSSVKSLKITGTGEGQIDLAFLRTLGTDFIPDIVHKFLKSNPAKSIDFKFHTGVTTDIIQGLKERKYDIAFCSKLEKEKGIEFIPVAKQDLVLIVPYSHPLAAKDTIDLKETIPYPQIVFNQRSGLRYIIDDMFKKINQQPNIVYEVEEDQVIAGLVAKNFGIAVVPNMNMLSFTKVKVIQIIHPSWERNFYLAFIKDRYLPPAIKNFKNFVIKNAQL
>NZ_CP046327.1|WP_009890953.1|33115_33964_+|sugar-phosphate-isomerase/epimerase
MNNQKNLNIPITISSYTLGTEVSFRDRVRIAKEAGFDGIGLRAENYIDAKNAGVTDEEMIAILNEYDMKVTEVEYITQWGTEEDRTEAQREKEQNVYHMAHLFNVKHINCGLLEMIPEEQIITALGELCDRAGELIIGLEFMPYSGVPDLATAWRVVKGCNRENAMLILDTWHWARAKQTAEDLAPVPADKIVSIQVCDVLETPYEKLRDESLHDRLAPGEGYGNTEEFVKIIKEHNISPRVIGAEVISDSLISKGLSTAAETVFNATKKVLDKAWSEVSPK
>NZ_CP046327.1|WP_009890951.1|34042_35965_+|NAD(P)-binding-protein
MKISSMFTPIRIGSMTVPNRFVVPPMGNNFANTDGTLSETSKAYYLERALGGFGLITIESSVVDKKAKGGPRKPCLYDDSTIDSFKNVIDACHDAGSKVSIQLQHAGSEGNEKVAGHPLKAASAIPASNGRNTPLAITTEEIYELIESYGDAALRAQKAGADAVEVHCAHGYLVSSFISQRTNKRVDEFGGCFENRMRLPRLIIENIRKKVGNSLAILCRINSTDDVPGGIDIHDSSVIAAYLEGCGIDGLHVSRSIHIHDEYMWAPTTLHAGFSAELVTEIKKAVSIPVITVGRYTEPQFAELMVRQGRCDLVAFGRQSLADPEMPNKAKNGKLDEMIPCIACLQGCVPNMFQGKPIACLANPILGHEAELKPAEISKEVLVVGGGVGGMLAAWVCAKRGHNVTLVEKSEVLGGQMRLAAYPPGKGDITNLVRSYISKCNQYGVKICTNTEATVELIKEKSPDVVIIATGATPLVLPIPGINDSGLIHAVDLLDGKKSCGKKVLVVGGGMVGCEVAAFLGEQEHEVTVIELREEVGADVISEHRKFLMNDFENYNIHTITGAKVSKFYDDGVDYLLTDGTEHDLKGFDSVVLAMGSRNYDPLSEVIKEVVKETYIVGDAVKARRALDATKEAFEVALNI
>NZ_CP046327.1|WP_009893714.1|36046_36910_+|shikimate-dehydrogenase
MEISGRTGLFALIGTPVGHSKSPVMYNYSFKKLDLDYRYLAFDITVDKVKEALLAIKTFNIKGANVTMPCKSAVTEYMDELSPAARIIGACNTIVNDNGKLVGHITDGVGYVRNLKENGIEVKGKKITIMGAGGAATAIQVQCALDGAREISIFNAKDDFYKRAEQTVENIKKDVPECVVNLYDLEDTNKLYEEIESSDILTNATLIGMKPYDNETNIKDTSVLRKDLVVTDVVYNPKKTKMIEDAEANGCKAIGGLGMLLYQGAEAFNLYTGLEMPVEEVNELCFK
>NZ_CP046327.1|WP_009890947.1|37109_38327_+|MFS-transporter
MNNKKYYPTAIALYFSYFLLGIGISILGQYKPEFSSMWGAKTLSDGTLDVSIVLAVIAALGLGRLISYPFAGPISDKYGRKVSGLIGNFLHAIFFVGIVFSPNFYIAYVFAIIGGAANSFLDTCVTPSCMEIFASLGTIANMFTKFTIALAQFLLPFIIGFVAANSISFKVIFIVTAILIVVDAILIAVLPFPPANNVIDNKGKTVKSEKMKFTPTSIALVCIGFTCTSTFVLWLNCNQELGKLYGMADPTKIQSFYSMGVICAVLITSLLIKKYIKPIRILVIYPIIALLMLLIVYFVQTPTICMLGGFVIGYSAAGGVLQLTTSTANEMFPTNKGKITSIVMIASSIANYVILNIAGIITKSGGVNGPKYVVLFNVAITFVGILLALFVNMRYEKEKVYDYDV
>NZ_CP046327.1|WP_074014319.1|38559_40428_+|restriction-endonuclease
MVENVFKRLQEFNGYDGYKESFEMNYLCIYESIPLREQVELANNLVDEILNMYKSESNEIYLLEDSNSKSLICYFEIFMKKINTLVKEMIIDEKWLYKLTKELIYKSKKVEYVKLGLVLSEKYLNVENLREVVDTFSKSGEYVFYLSNTIKKLEFYNTYLFNLSKKATGSIKVFAIVNMENLDSKINSYLIEDGYKDTKYERLLMNYIISIVDLNEYLEKRDLDKEKINNLARLICNYLLSVEFKYIGNKLELVNRFLPTVVNYGTNFESLYSIFLIAINVLKDENIEYNKIEFEKEINDILLSEKWKNIYFEALRDASGKTEDIIKMSEIYDVNLSFDDLLPYLNRDIRDFEVYWHISKKGTTSSRLKLLNFFEETFKIDDLIGKMKDIEKDKLTQEYYDDMLFFIVLKGSKSLYPEGKNISLKGIFGNINEVRKESINILKRYREKLSLEELKIVKEAYEKEKNVILKDELRRVLYESNNLKKEFVNIEKIKVDEHGKDIYLTSIAVAGSRFRNREYLEKELEKSKIYYLTREKDNLYDEKAIKIVGETGYVIGYVPRKENYILSNLLDGGKLLYCRVTEYNLYEDCIYANVYLSYKDVIETVENSLKMVLDKSRIKLIN
>NZ_CP046327.1|WP_009890943.1|40605_41970_-|amidohydrolase
MSQLLIKNAYLITMNADREVYETGSILIENNIIKNVGKFDINIVDKDAEIYDAKGKILMPGLVNTHVHLSQQLGRGLADDVVLLTWLRERIWPYESSFNYEDSLISSTACCVELIKSGVTTFLESGGQYVDAMVEAVDKTGLRACLAKSVMDTGDGLPEAWQKTTDEEINTQLDLFHKFNNTSNERIKIWFALRTIFNTTEELLIRTKELADKYNTGIHMHIAEIADEISFVKQNNGVGTVEYLDKLGVLGPNLLAAHTVWLTHKEIDLFRLHDVKVSHNPGAAMKVVLGFASIPEMLEKGIPVSIGTDGAPSNNRMDLMRDMYLTSLIHKGRTLNPTVVPAEEVLEMATINGAKCALLEKEIGSLEVGKKADMIILNPDTIHCLPMHNPIGNIVYSMTSENVDSTICDGKWLMKERKVLVVDESELLNKVKKQASKIKDKAEVKIPSKFKIIK
>NZ_CP046327.1|WP_009890940.1|42116_43460_-|NCS2-family-permease
MVPNTNNVQPDGNNSSLSFLDKMFKFSERGSSLKTEVIGGVTTFLTMAYIVFVNPAILSEAGMDKAALITVTILATAIGTLIFAILGNAPFALAPGMGLNAFFTYSLVIGAGIPWQTGLGVVFLSGCVFFTLAVTGLRKTIADAIPRELAVASSAGIGLFLAFVGLKNMGVIIANPDTIVSLADFTPTVLIALFALILMAILEYKKVKGGILISIVVATIISVIFGFVELPTAIISTPPSIAPVAFKLDIVGALKFSLIGPIFSFMFIDMFDSLAFLITCCKQMGLEDENGEIKDLGRMLYADVSSTLIGSFLGTSTVTTFGESASGIAAGARTGLASIVTAALFLATLIFTPLLGIVPTYAAAPALVMVGVFMFESIKQIDFADSKIAVPAFVTVLLMPLTYSISIGLCFGFISYIIMHVVAKETDKISITLWIIGLLAVVNLVLS
>NZ_CP046327.1|WP_009893713.1|43963_44617_+|pentapeptide-repeat-containing-protein
MTKIIKVQKPKFTGELEIIENLEDILEDIFNDEKIFNKIIENEVISDLDSVRVSFESCIFRNVSFENCNLKKIDLLDVVFENCNLSNSFFDGGSIYRVEFKNSKLIGVRFDDCILKNVLFKDVLGKYSNFSFSKFKIVSILDSNFENSVFQEVKGDNLVFEYTNLKKANFNGTKLSGIDFTTNNIEGIEIGIDEIRGAIFDVSQAIDLTKLMGIIIK

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Crispr_ID: NZ_CP046327_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046327_2

801637-802320

Orphan

I-A

Consensus_repeat	Method
GTTTTATATTAACTATATGGAATGTAAAG	PILER-CR
GTTTTATATTAACTATATGGAATGTAAAG	CRISPRCasFinder
GTTTTATATTAACTATATGGAATGTAAA	CRT

10 spacers

The CRISPR arrays of NZ_CP046327_2

>merge|NZ_CP046327|2|801637-802320|PILER-CR,CRISPRCasFinder,CRT
GTTTTATATTAACTATATGGAATGTAAAGTAGGATTGGTGTGTTACGACCACACAACGCTGGACTGTTTTATATTAACTATATGGAATGTAAAGAGTGAATTTGGCGAACTCGATATAGAGAAAAAAATAAAGGTTTTATATTAACTATATGGAATGTAAAGGAAGTTTTTAATGTTGTCGCGACTCTTGCTGTTGCTTGTTTTATATTAACTATATGGAATGTAAAGCTGCTTTGGCTTTTGGTCGTATAATGCTCCTTATAATAGTTTTATATTAACTATATGGAATGTAAAGTTAAATCTAGCATCAGTCATTAGTATAAAATTTCCTCGTTTTATATTAACTATATGGAATGTAAAGAATAAAAAAGGTATAGTTTTCTTCTTAGTTACTGCCATGTTTTATATTAACTATATGGAATGTAAAGTGTTATAATATTAAAACACAACTAAAATATACAGAAAGTTTTATATTAACTATATGGAATGTAAAGTCTAGTTTTTTCTCTTTAGAAAAAATAAAAACAACTGTTTTATATTAACTATATGGAATGTAAATTAAAATTGTGTTTTCTCTTTCATACACCCACTTCATTAGTTTTATATTAATTATATGTAATATAAATGTTTTTTCTTATTAAATAAAGATTGAGTCACTTTATATTTAATAATACATATTCTAAA

>NZ_CP046327|2|1|801637-802195|PILER-CR
GTTTTATATTAACTATATGGAATGTAAAG	TAGGATTGGTGTGTTACGACCACACAACGCTGGACT
GTTTTATATTAACTATATGGAATGTAAAG	AGTGAATTTGGCGAACTCGATATAGAGAAAAAAATAAAG
GTTTTATATTAACTATATGGAATGTAAAG	GAAGTTTTTAATGTTGTCGCGACTCTTGCTGTTGCTT
GTTTTATATTAACTATATGGAATGTAAAG	CTGCTTTGGCTTTTGGTCGTATAATGCTCCTTATAATA
GTTTTATATTAACTATATGGAATGTAAAG	TTAAATCTAGCATCAGTCATTAGTATAAAATTTCCTC
GTTTTATATTAACTATATGGAATGTAAAG	AATAAAAAAGGTATAGTTTTCTTCTTAGTTACTGCCAT
GTTTTATATTAACTATATGGAATGTAAAG	TGTTATAATATTAAAACACAACTAAAATATACAGAAA
GTTTTATATTAACTATATGGAATGTAAAG	TCTAGTTTTTTCTCTTTAGAAAAAATAAAAACAACT
GTTTTATATTAACTATATGGAATGTAAAT

>NZ_CP046327|2|2|801637-802262|CRISPRCasFinder
GTTTTATATTAACTATATGGAATGTAAAG	TAGGATTGGTGTGTTACGACCACACAACGCTGGACT
GTTTTATATTAACTATATGGAATGTAAAG	AGTGAATTTGGCGAACTCGATATAGAGAAAAAAATAAAG
GTTTTATATTAACTATATGGAATGTAAAG	GAAGTTTTTAATGTTGTCGCGACTCTTGCTGTTGCTT
GTTTTATATTAACTATATGGAATGTAAAG	CTGCTTTGGCTTTTGGTCGTATAATGCTCCTTATAATA
GTTTTATATTAACTATATGGAATGTAAAG	TTAAATCTAGCATCAGTCATTAGTATAAAATTTCCTC
GTTTTATATTAACTATATGGAATGTAAAG	AATAAAAAAGGTATAGTTTTCTTCTTAGTTACTGCCAT
GTTTTATATTAACTATATGGAATGTAAAG	TGTTATAATATTAAAACACAACTAAAATATACAGAAA
GTTTTATATTAACTATATGGAATGTAAAG	TCTAGTTTTTTCTCTTTAGAAAAAATAAAAACAACT
GTTTTATATTAACTATATGGAATGTAAAT	TAAAATTGTGTTTTCTCTTTCATACACCCACTTCATTA
GTTTTATATTAATTATATGTAATATAAAT

>NZ_CP046327|2|1|801637-802320|CRT
GTTTTATATTAACTATATGGAATGTAAA	GTAGGATTGGTGTGTTACGACCACACAACGCTGGACT
GTTTTATATTAACTATATGGAATGTAAA	GAGTGAATTTGGCGAACTCGATATAGAGAAAAAAATAAAG
GTTTTATATTAACTATATGGAATGTAAA	GGAAGTTTTTAATGTTGTCGCGACTCTTGCTGTTGCTT
GTTTTATATTAACTATATGGAATGTAAA	GCTGCTTTGGCTTTTGGTCGTATAATGCTCCTTATAATA
GTTTTATATTAACTATATGGAATGTAAA	GTTAAATCTAGCATCAGTCATTAGTATAAAATTTCCTC
GTTTTATATTAACTATATGGAATGTAAA	GAATAAAAAAGGTATAGTTTTCTTCTTAGTTACTGCCAT
GTTTTATATTAACTATATGGAATGTAAA	GTGTTATAATATTAAAACACAACTAAAATATACAGAAA
GTTTTATATTAACTATATGGAATGTAAA	GTCTAGTTTTTTCTCTTTAGAAAAAATAAAAACAACT
GTTTTATATTAACTATATGGAATGTAAA	TTAAAATTGTGTTTTCTCTTTCATACACCCACTTCATTA
GTTTTATATTAATTATATGTAATATAAA	TGTTTTTTCTTATTAAATAAAGATTGAGTCA
CTTTATATTTAATAATACATATTCTAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046327.1\|WP_009890169.1\|794588_795881_+\|diaminopimelate-decarboxylase	unknown	unknown	gnl\|CDD\|143501
NZ_CP046327.1\|WP_003428954.1\|803484_803700_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|226181
NZ_CP046327.1\|WP_009890007.1\|798187_798904_+\|rRNA-pseudouridine-synthase	unknown	unknown	gnl\|CDD\|224108
NZ_CP046327.1\|WP_009893407.1\|807081_807555_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379326
NZ_CP046327.1\|WP_009899876.1\|805199_805898_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|274612
NZ_CP046327.1\|WP_009890008.1\|796911_797997_-\|AI-2E-family-transporter	unknown	unknown	gnl\|CDD\|223701
NZ_CP046327.1\|WP_003424287.1\|793377_794571_+\|aspartate-kinase	unknown	unknown	gnl\|CDD\|235843
NZ_CP046327.1\|WP_003428951.1\|803710_804178_-\|DUF2975-domain-containing-protein	unknown	unknown	gnl\|CDD\|378586
NZ_CP046327.1\|WP_003435150.1\|802871_803045_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046327.1\|WP_009890009.1\|796097_796757_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|367360
NZ_CP046327.1\|WP_009893404.1\|809311_810346_+\|N-acetyl-gamma-glutamyl-phosphate-reductase	unknown	unknown	gnl\|CDD\|234761
NZ_CP046327.1\|WP_011861440.1\|793187_793427_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046327.1\|WP_009890003.1\|807857_808622_+\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|379530
NZ_CP046327.1\|WP_003424273.1\|799933_800806_+\|MurR/RpiR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224651
NZ_CP046327.1\|WP_003424276.1\|798961_799540_+\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|377744
NZ_CP046327.1\|WP_003435136.1\|790529_792230_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046327.1\|WP_009890004.1\|806155_806713_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP046327.1\|WP_011861438.1\|804315_804444_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046327.1\|WP_003435139.1\|792369_793017_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046327.1\|WP_012816233.1\|802421_802715_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP046327.1\|WP_009890169.1\|794588_795881_+\|diaminopimelate-decarboxylase	gnl\|CDD\|143501	cd06828, PLPDE_III_DapDC, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Diaminopimelate Decarboxylase. Diaminopimelate decarboxylase (DapDC, EC 4.1.1.20) participates in the last step of lysine biosynthesis. It converts meso-2,6-diaminoheptanedioate to L-lysine. It is a fold type III PLP-dependent enzyme that contains an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain, similar to bacterial alanine racemases. DapDC exists as homodimers with active sites that lie at the interface between the TIM barrel domain of one subunit and the beta-sandwich domain of the other subunit. Homodimer formation and the presence of the PLP cofactor are required for catalytic activity.	1.28076e-170
NZ_CP046327.1\|WP_003428954.1\|803484_803700_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|226181	COG3655, COG3655, Predicted transcriptional regulator [Transcription].	5.69774e-28
NZ_CP046327.1\|WP_009890007.1\|798187_798904_+\|rRNA-pseudouridine-synthase	gnl\|CDD\|224108	COG1187, RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis].	1.16227e-97
NZ_CP046327.1\|WP_009890003.1\|807857_808622_+\|N-acetyltransferase	gnl\|CDD\|379530	pfam14268, YoaP, YoaP-like. The YoaP-like domain is found at the C-terminus of the B. subtilis YoaP protein. It is found in bacteria and archaea, and is approximately 40 amino acids in length. The family is found in association with pfam00583. There is a single completely conserved residue A that may be functionally important.	9.96258e-16
NZ_CP046327.1\|WP_009899876.1\|805199_805898_-\|alpha/beta-hydrolase	gnl\|CDD\|274612	TIGR03502, lipase_Pla1_cef, extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae.	0.000405605
NZ_CP046327.1\|WP_009890008.1\|796911_797997_-\|AI-2E-family-transporter	gnl\|CDD\|223701	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only].	5.57662e-37
NZ_CP046327.1\|WP_003424287.1\|793377_794571_+\|aspartate-kinase	gnl\|CDD\|235843	PRK06635, PRK06635, aspartate kinase; Reviewed.	8.79458e-175
NZ_CP046327.1\|WP_003428951.1\|803710_804178_-\|DUF2975-domain-containing-protein	gnl\|CDD\|378586	pfam11188, DUF2975, Protein of unknown function (DUF2975). This family of bacterial proteins have no known function. These proteins are likely to be integral membrane proteins. The proteins contain a highly conserved glutamic acid close to their C-terminus.	1.39911e-05
NZ_CP046327.1\|WP_009890009.1\|796097_796757_+\|hypothetical-protein	gnl\|CDD\|367360	pfam03154, Atrophin-1, Atrophin-1 family. Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteristic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.	1.75004e-05
NZ_CP046327.1\|WP_009893404.1\|809311_810346_+\|N-acetyl-gamma-glutamyl-phosphate-reductase	gnl\|CDD\|234761	PRK00436, argC, N-acetyl-gamma-glutamyl-phosphate reductase; Validated.	0
NZ_CP046327.1\|WP_009893407.1\|807081_807555_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379326	pfam13673, Acetyltransf_10, Acetyltransferase (GNAT) domain. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	5.1159e-50
NZ_CP046327.1\|WP_003424273.1\|799933_800806_+\|MurR/RpiR-family-transcriptional-regulator	gnl\|CDD\|224651	COG1737, RpiR, Transcriptional regulators [Transcription].	1.10432e-65
NZ_CP046327.1\|WP_003424276.1\|798961_799540_+\|methyltransferase-domain-containing-protein	gnl\|CDD\|377744	pfam06962, rRNA_methylase, Putative rRNA methylase. This family contains a number of putative rRNA methylases. Note that many family members are hypothetical proteins.	7.51313e-74
NZ_CP046327.1\|WP_009890004.1\|806155_806713_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	6.56319e-10

>NZ_CP046327.1|WP_003424273.1|799933_800806_+|MurR/RpiR-family-transcriptional-regulator
MEETNEMKDSKHLISNIQSQYTRLSKGQKLIAQYILNNYDKVAFMTACKLGETVGVSESTVVRFANALGYSGYPKLQAALQELIKNKLTTVQRVEMAHDYSDDFAILNKVLKSDIDNIRSTLEEIDERAFKEASNKLLRARKIYILGMRSSFVVAQYLGFYLDIILDNVHIIRMDMGDAFEQIVRINEEDVIVAISFPRYSKKSYQIVNYAKEKGAHVISLTDSLFAPVASLADNTLLVKSNMASFVDSLVPALSISNALAISVGMKEKEDIKQHFDDLEQIWKRYSVYE
>NZ_CP046327.1|WP_003424276.1|798961_799540_+|methyltransferase-domain-containing-protein
MAYAKYLTKITDINKFYLENIINEGDIVIDATMGNGYDTRYLAEKVGEKGFVYAFDIQEEAIKSTRKKLEKEGYTDRVKLIFDGHEKMNQYIKEEVSCVLFNLGYLPRAKHSIITKPDTTLKAIKLSLEMLKENGVISIAIYTGHDGGQEEKDCIYNLVNNLNQDEFNVLESKFLNQVNNPPQLILIEKKKA
>NZ_CP046327.1|WP_009890007.1|798187_798904_+|rRNA-pseudouridine-synthase
MRINKYIASCGIASRRKSEEIILGGRIKVNGSVVKELSFNIDEEKDIVEFDNKKVKPSENYIYIVLNKPEGYITTVKDQFNRPSVIDILKDVRERVYPIGRLDYETSGLLILTNDGDLTYKLTHPKHEIDKTYVASVKGIISDDEIRQFETGLKIEDYTTAPAKIRVTKENKEKNYSVCEITIHEGRNRQVRKMCKAINHPVLNLRRISVGKIVLKDTKVGEYRYLTEDEIKYLKSIK
>NZ_CP046327.1|WP_009890008.1|796911_797997_-|AI-2E-family-transporter
MIIILKENIKYYLIVVFIGILFFKFINTPSNFISSIEGFLKFFSPFLLAILLALLLNPLVMLFEVKFKAHRLLAIFLSYIFIGFILAFAIRLLIPSIANTLNRLINEMPMYTDYIDSFIEKNMSNIDFLKTLIPHIQHSLDNLLKEASNFVGKIPKNFLIYTLSISSMLFNMTMGFILSIYIIYDKEKIALGFKRFLYSSTARNKADNIIEFFRTTHDIFYDYLLGRILDSLIIGIIAFLGFQFVIRIENALFLASIIFLGNIIPYFGPFIGAIPPIAMTILYSPQKTIWVIAFLFILQQLDGNFIEPKVMGNQVGIGAIWVISAILVGQSLFGFIGVFLSVPIAAVVKTYVDKYIDNRLQ
>NZ_CP046327.1|WP_009890009.1|796097_796757_+|hypothetical-protein
MRGRVILLISILSIFLVGCSFNKKDEINLVEQGKTYLEKHNYKKAMESLSSALEEDSTNENARAMYMQAMRMSNMTEFEELKNYEGAIKELKLIEKIKNGSSVIKEEATKKKEELTKLEKEQNEAEEQRKKKAKDTAGEDRYRVESDARKSSYSGSSKNNKYSSKNNDKKSDSNKSDNNNSSSQNQEKPNNSNPTPAPTPQDTTGGSDSGGNSQNSNNQ
>NZ_CP046327.1|WP_009890169.1|794588_795881_+|diaminopimelate-decarboxylase
MKLHGTMTVNNDELYIGGVSCLELSKKYQTPLYVFDEALVRQNCREYIEYFKAREGKNKVAYAGKAFLPLYMCNLINEEQMCLDVVSGGELYTAYKSNFPMEKVFFHGNNKTKEEINMGLDLGVGKFVVDNFYELDLLEALCEDKGKTQEIYFRITPGIEAHTHDYIKTGQIDSKFGFALVNGDLFRAIEKLSEYKNIKLVGLHAHIGSQIFDVEPYIDTVDIMMNLVKEIKEKFNIQLTEIDLGGGVGVYYSEGDKPKTIKEFCETIITKAETSCKELGIEVPTLVIEPGRSIVANAGSTLYTVGSIKDIKDVRVYVSVDGGMTDNVRPSLYQASYECSIVNKINHEAMNHVTIAGKCCESGDILIGDINIMDIKSGDILITTSTGAYGYSMSSNYNKIPRAAVVSVFDGNDKIICKRQSYEDLLALEI
>NZ_CP046327.1|WP_003424287.1|793377_794571_+|aspartate-kinase
MSIIVQKYGGSSVADTEKIKSIAENIIERRKENPQMVIVVSAMGKSTDEYITLAKELSNEPSKRELDALMSTGEMISASLLSIALNALGCKAISYNAYQLNIKTSGLHGKSQIDDINVNRIKNSLDEGNVVIVTGFQGINEDGDVTTLGRGGSDTSAVALAVKLNGKCEIYTDVDGIYFTDPRKYSKASKLDEIEYEEMLELASLGAQVMHSRSIELAQKYGVEIYVGRTCGTEKGTYIRGGKDMKLEDKVITGLATSDDDSSITIKDFKAENISSLFEDIATIGISVDMISQTAPILDKISVSFTVPKEELGECKKIVSKYTDEEHVVIDNNITKFSLVGLGMKNTSGVAAKVFKIFNENGIMIKLITTSEIRITCAINSDDKQVAIEKIAEVFNI
>NZ_CP046327.1|WP_011861440.1|793187_793427_+|hypothetical-protein
MMKGYIAEEILLTDKFSGLMQNMHKAVTFKVVSYKVTWSMKFTRPKYTFGRFYLSKFSLRGRKHEYNCSKIWWKFSSRY
>NZ_CP046327.1|WP_003435139.1|792369_793017_+|hypothetical-protein
MQIILQGECTMTNMEKEILLLISRVRCVTESQFRKIYGDQKRYNKKNFKKTLRKMCSEYTLKKYPCDVDYYNYKDLSYVYYLNGSKLFKGDDLIKALVGSELVVRINTAGCDVKRFYRNVSVDDVKYDLFIEYTDQFGNIKQVLVDVDLNNEIDISKYENLSKKIDKSTIPFFKVPNVLVVTPDNLSELNDLERYDNEYSINFIDLGLNKLFNCI
>NZ_CP046327.1|WP_003435136.1|790529_792230_+|hypothetical-protein
MKRYLKTYGVALIIVIIYAFIKLPVLRLDFTSLFSVGIIFFVVAGILDMMLDRNERASKMAKYNFSIAIALLVYIVVVPFITSTPVLHAKSYRELLGKVTESKFTDDISPVSVNDIRLVDEDMAMKLGDKKLGEVPAIGSVSKLGKFHIQNVDGELYWVAPLVHRDIIKWITSLSGTSGYVKVSASNPQDVQLVQEIDGKPIKIVYQPEAYLHQDLQRHLYIHGIVNVGMTDFTLEINDEGRPYWVVSLYEHKIGYGGANATGIATVDAETGKINVYDVKNTPKWVDRIQPQSFVTDQIKDWGVYVNGFLNSVISEKGVLVPTEGTSLVYGNDNRSYWYTGITSSGGDESTIGFMLVDSRTKEARLYKQPGATETAAMKSAEGNVQEKNYEATFPVMYNILGQPTYVSSLKDKAGLVKRVAFVSVEDYNVLGIGEDKNEALRNYKDALESKGNDLKLDNDLKDEVLEGTVTRISPDVRGGNTNYYVTLDSNKDIIFRATSKVSSELPLTQVGDKVKISYSKEESGVIEMSEFDNLNIANFEDKKAKEKTGTDENTDSKDSENQGNV
>NZ_CP046327.1|WP_012816233.1|802421_802715_+|hypothetical-protein
MDEMLVYNKSFYPNDIFPRLDFSKIKKQLKLIDNDLSDFGRICIIEKEHYTISVNSIGEINVYYDLEYENKVYRIVYEIEKLFKSQVGRFSISTYRN
>NZ_CP046327.1|WP_003435150.1|802871_803045_-|hypothetical-protein
MKRKLSTYFKGYILGLCIAFLLFTFILKKLIIENIIGIIIGTGIAFLLIYLFNKKRK
>NZ_CP046327.1|WP_003428954.1|803484_803700_-|helix-turn-helix-transcriptional-regulator
MAIVVNLDVMMAKRKISLKDLAEKIDITNANLSILKTGKAKAIRFTTLNEICKALDCQPGDILEYVEDEND
>NZ_CP046327.1|WP_003428951.1|803710_804178_-|DUF2975-domain-containing-protein
MITKFFSNILSVFLYFLLSLLGVAGIIFLCMIPMFLYDFSSDKVIALIARILYFSDYFIVILFLIFIINSTKYSPFILENVKRFKVMGCCLLINTIIECVIGYNSNTSLIMIFGDNSGGISPLMVISFIFALMCFVIAETFDKAIKIKEDNDLTI
>NZ_CP046327.1|WP_011861438.1|804315_804444_-|hypothetical-protein
MLIPILKYTISTNGIKIIYNKVKIIPISTILFNILQLIFFFI
>NZ_CP046327.1|WP_009899876.1|805199_805898_-|alpha/beta-hydrolase
MEKKYFEIHGVPSILWGNPSSKLYIYIHGQCGNKEEAEAFANIAVPHEYQVLSVDLPEHGERKREKNSFNPWHVVPELVSIMEYAKCHWNQISLYANSIGAWFSMLSFEKENLRECIFVSPILDMQQLISNMMLWANVSEEQLKHELIIPTSFGHTLSWEYLQYVKQHPITQWNVPTKILYGKHDELTEIGVVEKFVEKFNCNLTILENGKHWFNTPQELNSLYEWLNTLVK
>NZ_CP046327.1|WP_009890004.1|806155_806713_+|TetR/AcrR-family-transcriptional-regulator
MRVSREIVIQATSDIVNKDGLNKVSLKVIAEKLGIRTPSLYNHIESLDDLLLEVAHKGMREMNSQMIKATIGNFGDTAIKCISIAYFNFIISNPGVYETIQWATWHGNNETLEIFDEYKSLLEKLILSCNLNTKNTGEVLNLIMSVLHGYSTLQLGKSLLSKEEAIKGLADSIDTVLLGIHKKYD
>NZ_CP046327.1|WP_009893407.1|807081_807555_-|GNAT-family-N-acetyltransferase
MFKEYLIRELKEDDIKNALDLIWNVFEEFESPDYCDEGITTFHQFIEYNSIIEKIKEKTLFFWGCFDSKKLIGVLAIRNLNHICMLFVDKNYHKHGVAKKLMTTGIQYCICNKFNLTEITVNSSPYAVEVYHKLGFEDIAVEQIVDGIRFTPMKLLI
>NZ_CP046327.1|WP_009890003.1|807857_808622_+|N-acetyltransferase
MQIIDININNIDSRHICCSISEKKGENCVFSKKAWMKNNFDKGLAFKRFDVRGKAFIEYIPAENAWCPITADNYIFINCFWISGKFKGQGYSNLLLQECVDDAKSKGKYGLVVLSSSKKMPFLSDAKYLKYKGFCLADTSEPNYELLYFPFTDNAPIPCFKNCVKKRKLNENGIVLYYSNQCPHTEKYAPILKKIANSRGIDVNLIKFETAKEAQNAPAPFTTYSLFFNGEFVTNEILSEKKIEKFLDTNIKKI
>NZ_CP046327.1|WP_009893404.1|809311_810346_+|N-acetyl-gamma-glutamyl-phosphate-reductase
MNKIKVGIIGATGYVGAELIRLLMNHDKVEVTAIGSNSYVGKNIVDIYPSIGYKNNMICIENEKVIDMCDVVFTALPHGVSEKFVIKAIKSKKKVIDLGADFRIKDEEVYSKWYGVSFIDKILHKKAVYGLSEIYKEDIKDADIIANPGCYPTSISLPLMPLLSSKLIKNNNIIIDSKSGLTGAGRELSISSHFTEVNENITAYKIGKHRHTPEIEQNLSESCKEKVSVVFTPNLIPVNRGILSTIYCTKEDNISINDIHRKLTDYYEFKEFIEVLPLDKVASLKNVRFSNKCVISLHENGDTLIICSAIDNMIKGAAGQAIQNMNIIFGIEENTGLKNIAPSF

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Crispr_ID: NZ_CP046327_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046327_3

1151624-1152578

Orphan

I-A

Consensus_repeat	Method
ATTTACATACCACATAGTTAATATAAAAC	CRISPRCasFinder
ATTTACATACCACATAGTTAATATAAAAC	CRT
GTTTTATATTAACTATGTGGTATGTAAAT	PILER-CR

14 spacers

The CRISPR arrays of NZ_CP046327_3

>merge|NZ_CP046327|3|1151624-1152578|CRISPRCasFinder,CRT,PILER-CR
ATTTACATACCACGTAGTTAATATAAAACAAATTTCAAGCGATTGGACAACGAATAAAAATTGCAATTTATATATCATGTAGTTAATATAAAGCATATTTGTGTCGATATATAGTTCTAACTAAGTATAAGATTTACATACCTCATAGTTAATATAAAACAATGTGTCCGAATTGGACACATAGAAAGGAAAAGTAAAAATTTACATACCACATAGTTAATATAAAACTATGCTTATATATTATGTTTATTCTGTTGTTTCTAAAATTTACATACCACATAGTTAATATAAAACGATTTTTTCATGCGGAGGAAAATTGATGTGGGGACATATTTACATACCACATAGTTAATATAAAACAGATAATCTAGGCACACATACAATGCGCAAAACTTTATTTACATACCACATAGTTAATATAAAACATTCAGACGATATAGGCGCAGGAGCTAAGTATTCTGAAATTTACATACCACATAGTTAATATAAAACCAGCACGCCAAGTATAAGTAAAACTTCCACTATCACCATTTACATACCACATAGTTAATATAAAACTAAATGTTGCTCCGTAACCTAAAAACATAATGCTCCAATTTACATACCACATAGTTAATATAAAACGTGAAAGAAAAATTAATATGCTATTTACATTTTACAAATTTACATACCACATAGTTAATATAAAACCATTCCACAATTTATACAATTTTTTCTGTTCTAAAACATTTACATACCACATAGTTAATATAAAACTCTTCTTATCTTCCAGTTGCAAAATCTATGCTTGACCTATTTACATACCACATAGTTAATATAAAACTAGTTTGAGTGGTAAAAGTACGAAGTACCCCTCTTTAATTTACATACCACATAGTTAATATAAAACATATGTAATTCACCGTTTTAAATTATAGATAAATTAAATTTACATACCACATAGTTAATATAAAAC

>NZ_CP046327|3|3|1151624-1152578|CRISPRCasFinder
ATTTACATACCACGTAGTTAATATAAAAC	AAATTTCAAGCGATTGGACAACGAATAAAAATTGCA
ATTTATATATCATGTAGTTAATATAAAGC	ATATTTGTGTCGATATATAGTTCTAACTAAGTATAAG
ATTTACATACCTCATAGTTAATATAAAAC	AATGTGTCCGAATTGGACACATAGAAAGGAAAAGTAAAA
ATTTACATACCACATAGTTAATATAAAAC	TATGCTTATATATTATGTTTATTCTGTTGTTTCTAAA
ATTTACATACCACATAGTTAATATAAAAC	GATTTTTTCATGCGGAGGAAAATTGATGTGGGGACAT
ATTTACATACCACATAGTTAATATAAAAC	AGATAATCTAGGCACACATACAATGCGCAAAACTTT
ATTTACATACCACATAGTTAATATAAAAC	ATTCAGACGATATAGGCGCAGGAGCTAAGTATTCTGAA
ATTTACATACCACATAGTTAATATAAAAC	CAGCACGCCAAGTATAAGTAAAACTTCCACTATCACC
ATTTACATACCACATAGTTAATATAAAAC	TAAATGTTGCTCCGTAACCTAAAAACATAATGCTCCA
ATTTACATACCACATAGTTAATATAAAAC	GTGAAAGAAAAATTAATATGCTATTTACATTTTACAA
ATTTACATACCACATAGTTAATATAAAAC	CATTCCACAATTTATACAATTTTTTCTGTTCTAAAAC
ATTTACATACCACATAGTTAATATAAAAC	TCTTCTTATCTTCCAGTTGCAAAATCTATGCTTGACCT
ATTTACATACCACATAGTTAATATAAAAC	TAGTTTGAGTGGTAAAAGTACGAAGTACCCCTCTTTA
ATTTACATACCACATAGTTAATATAAAAC	ATATGTAATTCACCGTTTTAAATTATAGATAAATTAA
ATTTACATACCACATAGTTAATATAAAAC

>NZ_CP046327|3|2|1151624-1152578|CRT
ATTTACATACCACGTAGTTAATATAAAAC	AAATTTCAAGCGATTGGACAACGAATAAAAATTGCA
ATTTATATATCATGTAGTTAATATAAAGC	ATATTTGTGTCGATATATAGTTCTAACTAAGTATAAG
ATTTACATACCTCATAGTTAATATAAAAC	AATGTGTCCGAATTGGACACATAGAAAGGAAAAGTAAAA
ATTTACATACCACATAGTTAATATAAAAC	TATGCTTATATATTATGTTTATTCTGTTGTTTCTAAA
ATTTACATACCACATAGTTAATATAAAAC	GATTTTTTCATGCGGAGGAAAATTGATGTGGGGACAT
ATTTACATACCACATAGTTAATATAAAAC	AGATAATCTAGGCACACATACAATGCGCAAAACTTT
ATTTACATACCACATAGTTAATATAAAAC	ATTCAGACGATATAGGCGCAGGAGCTAAGTATTCTGAA
ATTTACATACCACATAGTTAATATAAAAC	CAGCACGCCAAGTATAAGTAAAACTTCCACTATCACC
ATTTACATACCACATAGTTAATATAAAAC	TAAATGTTGCTCCGTAACCTAAAAACATAATGCTCCA
ATTTACATACCACATAGTTAATATAAAAC	GTGAAAGAAAAATTAATATGCTATTTACATTTTACAA
ATTTACATACCACATAGTTAATATAAAAC	CATTCCACAATTTATACAATTTTTTCTGTTCTAAAAC
ATTTACATACCACATAGTTAATATAAAAC	TCTTCTTATCTTCCAGTTGCAAAATCTATGCTTGACCT
ATTTACATACCACATAGTTAATATAAAAC	TAGTTTGAGTGGTAAAAGTACGAAGTACCCCTCTTTA
ATTTACATACCACATAGTTAATATAAAAC	ATATGTAATTCACCGTTTTAAATTATAGATAAATTAA
ATTTACATACCACATAGTTAATATAAAAC

>NZ_CP046327|3|2|1151689-1152578|PILER-CR
ATTTATATATCATGTAGTTAATATAAAGC	ATATTTGTGTCGATATATAGTTCTAACTAAGTATAAG
ATTTACATACCTCATAGTTAATATAAAAC	AATGTGTCCGAATTGGACACATAGAAAGGAAAAGTAAAA
ATTTACATACCACATAGTTAATATAAAAC	TATGCTTATATATTATGTTTATTCTGTTGTTTCTAAA
ATTTACATACCACATAGTTAATATAAAAC	GATTTTTTCATGCGGAGGAAAATTGATGTGGGGACAT
ATTTACATACCACATAGTTAATATAAAAC	AGATAATCTAGGCACACATACAATGCGCAAAACTTT
ATTTACATACCACATAGTTAATATAAAAC	ATTCAGACGATATAGGCGCAGGAGCTAAGTATTCTGAA
ATTTACATACCACATAGTTAATATAAAAC	CAGCACGCCAAGTATAAGTAAAACTTCCACTATCACC
ATTTACATACCACATAGTTAATATAAAAC	TAAATGTTGCTCCGTAACCTAAAAACATAATGCTCCA
ATTTACATACCACATAGTTAATATAAAAC	GTGAAAGAAAAATTAATATGCTATTTACATTTTACAA
ATTTACATACCACATAGTTAATATAAAAC	CATTCCACAATTTATACAATTTTTTCTGTTCTAAAAC
ATTTACATACCACATAGTTAATATAAAAC	TCTTCTTATCTTCCAGTTGCAAAATCTATGCTTGACCT
ATTTACATACCACATAGTTAATATAAAAC	TAGTTTGAGTGGTAAAAGTACGAAGTACCCCTCTTTA
ATTTACATACCACATAGTTAATATAAAAC	ATATGTAATTCACCGTTTTAAATTATAGATAAATTAA
ATTTACATACCACATAGTTAATATAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046327.1\|WP_009889559.1\|1150927_1151215_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046327.1\|WP_009893217.1\|1146546_1148391_-\|glycerophosphodiester-phosphodiesterase	unknown	unknown	gnl\|CDD\|176521
NZ_CP046327.1\|WP_004454500.1\|1149838_1150390_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380339
NZ_CP046327.1\|WP_009889561.1\|1145640_1146225_-\|sugar-O-acetyltransferase	unknown	unknown	gnl\|CDD\|100047
NZ_CP046327.1\|WP_004454499.1\|1148685_1149648_-\|cysteine-synthase-family-protein	unknown	unknown	gnl\|CDD\|107204
NZ_CP046327.1\|WP_009893221.1\|1140249_1140975_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP046327.1\|WP_009889553.1\|1160868_1163343_-\|aminomethyl-transferring-glycine-dehydrogenase-subunit-GcvPA	unknown	unknown	gnl\|CDD\|234769
NZ_CP046327.1\|WP_009889551.1\|1166957_1167944_+\|lipoate--protein-ligase	unknown	unknown	gnl\|CDD\|161920
NZ_CP046327.1\|WP_003420312.1\|1168253_1169051_+\|lipoprotein	unknown	unknown	gnl\|CDD\|224381
NZ_CP046327.1\|WP_009889554.1\|1159411_1160869_-\|glycine-dehydrogenase-subunit-2	unknown	unknown	gnl\|CDD\|235292
NZ_CP046327.1\|WP_009889562.1\|1144363_1144540_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046327.1\|WP_009889552.1\|1164743_1166474_-\|Na+/H+-antiporter-NhaC-family-protein	unknown	unknown	gnl\|CDD\|224671
NZ_CP046327.1\|WP_009889564.1\|1141086_1141860_-\|ABC-transporter-permease	unknown	unknown	unknown
NZ_CP046327.1\|WP_009889556.1\|1153224_1154496_+\|amidohydrolase-family-protein	unknown	unknown	gnl\|CDD\|238628
NZ_CP046327.1\|WP_004454504.1\|1156228_1156546_+\|pyrimidine/purine-nucleoside-phosphorylase	unknown	unknown	gnl\|CDD\|377724
NZ_CP046327.1\|WP_009893219.1\|1142766_1143789_-\|membrane-protein	unknown	unknown	unknown
NZ_CP046327.1\|WP_009893215.1\|1156631_1158989_-\|HAD-IC-family-P-type-ATPase	unknown	unknown	gnl\|CDD\|319795
NZ_CP046327.1\|WP_009889563.1\|1141865_1142753_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213231
NZ_CP046327.1\|WP_009889555.1\|1155134_1155890_-\|DUF1835-domain-containing-protein	unknown	unknown	gnl\|CDD\|378848
NZ_CP046327.1\|WP_022619169.1\|1152773_1153013_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP046327.1\|WP_004454500.1\|1149838_1150390_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|380339	cd02209, cupin_XRE_C, XRE (Xenobiotic Response Element) family transcriptional regulators, C-terminal cupin domain. This family contains transcriptional regulators containing an N-terminal XRE (Xenobiotic Response Element) family helix-turn-helix (HTH) DNA-binding domain and a C-terminal cupin domain. Included in this family is Escherichia coli transcription factor SutR (YdcN) that plays a regulatory role in sulfur utilization; it regulates a set of genes involved in the generation of sulfate and its reduction, the synthesis of cysteine, the synthesis of enzymes containing Fe-S as cofactors, and the modification of tRNA with use of sulfur-containing substrates. This family belongs to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold capable of homodimerization.	4.10679e-17
NZ_CP046327.1\|WP_009893217.1\|1146546_1148391_-\|glycerophosphodiester-phosphodiesterase	gnl\|CDD\|176521	cd08579, GDPD_memb_like, Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial glycerophosphodiester phosphodiesterases. In addition to a C-terminal GDPD domain, most members in this family have an N-terminus that functions as a membrane anchor.	5.10494e-94
NZ_CP046327.1\|WP_009889556.1\|1153224_1154496_+\|amidohydrolase-family-protein	gnl\|CDD\|238628	cd01303, GDEase, Guanine deaminase (GDEase). Guanine deaminase is an aminohydrolase responsible for the conversion of guanine to xanthine and ammonia, the first step to utilize guanine as a nitrogen source. This reaction also removes the guanine base from the pool and therefore can play a role in the regulation of cellular GTP and the guanylate nucleotide pool.	1.3619e-169
NZ_CP046327.1\|WP_009889561.1\|1145640_1146225_-\|sugar-O-acetyltransferase	gnl\|CDD\|100047	cd03357, LbH_MAT_GAT, Maltose O-acetyltransferase (MAT) and Galactoside O-acetyltransferase (GAT): MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates. MAT acetylates maltose and glucose exclusively at the C6 position of the nonreducing end glucosyl moiety. GAT specifically acetylates galactopyranosides. Furthermore, MAT shows higher affinity toward artificial substrates containing an alkyl or hydrophobic chain as well as a glucosyl unit. Active MAT and GAT are homotrimers, with each subunit consisting of an N-terminal alpha-helical region and a C-terminal left-handed parallel alpha-helix (LbH) subdomain with 6 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X).	5.77782e-93
NZ_CP046327.1\|WP_004454499.1\|1148685_1149648_-\|cysteine-synthase-family-protein	gnl\|CDD\|107204	cd01561, CBS_like, CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.	3.00924e-108
NZ_CP046327.1\|WP_009893221.1\|1140249_1140975_-\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	1.59648e-80
NZ_CP046327.1\|WP_009889553.1\|1160868_1163343_-\|aminomethyl-transferring-glycine-dehydrogenase-subunit-GcvPA	gnl\|CDD\|234769	PRK00451, PRK00451, aminomethyl-transferring glycine dehydrogenase subunit GcvPA.	0
NZ_CP046327.1\|WP_009889551.1\|1166957_1167944_+\|lipoate--protein-ligase	gnl\|CDD\|161920	TIGR00545, Probable_lipoate-protein_ligase_A, lipoyltransferase and lipoate-protein ligase. One member of this group of proteins is bovine lipoyltransferase, which transfers the lipoyl group from lipoyl-AMP to the specific Lys of lipoate-dependent enzymes. However, it does not first activate lipoic acid with ATP to create lipoyl-AMP and pyrophosphate. Another member of this group, lipoate-protein ligase A from E. coli, catalyzes both the activation and the transfer of lipoate. Homology between the two is full-length, except for the bovine mitochondrial targeting signal, but is strongest toward the N-terminus. [Protein fate, Protein modification and repair].	1.48553e-93
NZ_CP046327.1\|WP_003420312.1\|1168253_1169051_+\|lipoprotein	gnl\|CDD\|224381	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism].	3.07907e-94
NZ_CP046327.1\|WP_009889554.1\|1159411_1160869_-\|glycine-dehydrogenase-subunit-2	gnl\|CDD\|235292	PRK04366, PRK04366, aminomethyl-transferring glycine dehydrogenase subunit GcvPB.	0
NZ_CP046327.1\|WP_004454504.1\|1156228_1156546_+\|pyrimidine/purine-nucleoside-phosphorylase	gnl\|CDD\|377724	pfam06865, DUF1255, Protein of unknown function (DUF1255). This family consists of several conserved hypothetical bacterial proteins of around 95 residues in length. The function of this family is unknown.	2.92347e-53
NZ_CP046327.1\|WP_009889552.1\|1164743_1166474_-\|Na+/H+-antiporter-NhaC-family-protein	gnl\|CDD\|224671	COG1757, NhaC, Na+/H+ antiporter [Energy production and conversion].	2.00354e-58
NZ_CP046327.1\|WP_009893215.1\|1156631_1158989_-\|HAD-IC-family-P-type-ATPase	gnl\|CDD\|319795	cd02609, P-type_ATPase, uncharacterized subfamily of P-type ATPase transporter, similar to uncharacterized Streptococcus pneumoniae exported protein 7, Exp7. This subfamily contains P-type ATPase transporters of unknown function, similar to Streptococcus pneumoniae Exp7. The P-type ATPases, are a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids. They are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle. A general characteristic of P-type ATPases is a bundle of transmembrane helices which make up the transport path, and three domains on the cytoplasmic side of the membrane. Members include pumps that transport various light metal ions, such as H(+), Na(+), K(+), Ca(2+), and Mg(2+), pumps that transport indispensable trace elements, such as Zn(2+) and Cu(2+), pumps that remove toxic heavy metal ions, such as Cd(2+), and pumps such as aminophospholipid translocases which transport phosphatidylserine and phosphatidylethanolamine.	0
NZ_CP046327.1\|WP_009889563.1\|1141865_1142753_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213231	cd03264, ABC_drug_resistance_like, ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.	4.66381e-105
NZ_CP046327.1\|WP_009889555.1\|1155134_1155890_-\|DUF1835-domain-containing-protein	gnl\|CDD\|378848	pfam12395, DUF3658, Protein of unknown function. This domain family is found in bacteria, and is approximately 110 amino acids in length. The family is found in association with pfam08874. There are two completely conserved residues (D and R) that may be functionally important.	1.79279e-29

>NZ_CP046327.1|WP_009889559.1|1150927_1151215_-|hypothetical-protein
MKKILYALYSFIVIIANFRLKEKNYNFILLAIFFILLLIQNGVLKTGYQNRATFYQDNYFNGEDKNDKIKFITIKIFIFLSLPLCFNILFNYLTS
>NZ_CP046327.1|WP_004454500.1|1149838_1150390_+|helix-turn-helix-transcriptional-regulator
MSINTVIAKNLNRLRNERNLSLGQLAELSGVSKVMLSQIEKGDSNPTVNTIWKIASGLNVPYTAILEQPQNETFIVSKTDIDVQVSENKDYRLYCYYPNTPTRNFELFQMELEEGHSYTSVGHSEKSQEYIMIIEGQLKLEVNDSIYQLRENDSICFSAESIHTYHNQGEKTLKAVIINYYPV
>NZ_CP046327.1|WP_004454499.1|1148685_1149648_-|cysteine-synthase-family-protein
MRVLNNVTEAIGNTHMLHLSKIADEFGVQGNIYAKMEYLNPGFSKKDRVALQMITEAENAGLLVPGQAVVELTSGNTGTGLAIACACKGYKFIACMSKGNSMERARMMKALGAEVVLVDQMPNSVHGQVSGEDLALVEIEAQKIAKERNAFRADQFNLEACNHAHEKYTAEEMWEQLDGNIDVFVDFLGSGSTFAGCSKTLKKHNSSIKCYVVEPETAAIYSGKEITDQGHKIQGGGYSMDLPLVDKKLIDGYIQVTDEEATDVARKLAKLEGVFAGFSSGANVCAAIKLLKSSEKGKNIVLTLNDSGLKYLSTDLYEEL
>NZ_CP046327.1|WP_009893217.1|1146546_1148391_-|glycerophosphodiester-phosphodiesterase
MQKRILRNFIFTGKNILSKLVFIIKYNFSTLILFELFHKGLALFFIWPSIRYIFDILIKSLHIVYLNMDNFIKVLTNPMSIVLIILSVIILAFYAFFEFTSVIICFNKSIKYEKIGLFELFKISFKNSIKLLYPKNILLFIFVILIIPLVNTVLISGFIGKIQIPEYILDYIKSDIILNIIYMIFLLIIYISVIRWIFSIHEITLNTENFKRARKESVNLIKRKIIRTIIYSLILSLVVAIIGYAIYHSGIIFIGIWTKYCTDMEFLKNVFINRCIAFEEYFRLILSIFIFILDIGFISATYYQYKGVNISKNNIKKEKKSISKIVFNLVLILLISYIESVAFSSHINGMFNTSFSFYTTAIAHRAGAEMAPENTLAAIEEASNAKADYAEIDVQETKDGELIVLHDSNFKRTTGVDKNVWDVNYNEVKTYDAGSFYYYGKGYYDEKFVGEKIPTLKEMIKYSKGKVKLLIEIKLNGHEKGDIVKKVVQLIKENNFENQCIVASMDKTILQKVKKLDENLLTCYFMAIAYGDFSKLNYVDIYGIESTFVNKTVVEKIHKMNKKIFVWTVNSDSLIEKMLDLNVDSIITDNPYLIESAIYWKKNGFISQVSDYLF
>NZ_CP046327.1|WP_009889561.1|1145640_1146225_-|sugar-O-acetyltransferase
MTEREKMLAGELYDCGDIELLTQWHKAKDLVRDYNQTDSSDLEKKEKILNELLGGKDKNLWITAPYYVDYGNNIYFGNNCEVNMNCTFLDDNKIIIGDNALIAPNVQIYTAFHPTNAGDRFGNVKEDGSFEFCKTQTAPVTIGDNVWIGGGAIIMPGVTIGDNVVIGAGSIVTKDIPSNMIAYGNPCRIIRENK
>NZ_CP046327.1|WP_009889562.1|1144363_1144540_+|hypothetical-protein
MFIGEIDKCTHILTAYISSSYDYCNFLDTQLDDFISEYGETVVETCLHQVLLLVSRYN
>NZ_CP046327.1|WP_009893219.1|1142766_1143789_-|membrane-protein
MVNWEIKKLAKSKSMFISLGILVLILMISIFITPVLETERYYIDKEKGCIEDTRSGIDIGNEKFQNKINVLKQFSNQTDTGEFSKKIELMSKKKLDNLSVNEYKDISFWKVFNYRVTNSLINVGMLIIISIIISNIYVDEVVTSVKDIILSSKEKKKALKSKIFVALLVPLVIYSVYLMGIFIITCMQQGVPVNGDLESFRIVDNVVALKTNLSITKYVILNIGIELLMFEGWAMIAIFGSFISKSSISSISFFIFIISITKIMSVIHILPKKLLSVVSNVNYYDLIFGFNKIIGNYLGDIMIFKVNIDIVNIAIGLLMAILIGAMSLCFLVIKSDYISR
>NZ_CP046327.1|WP_009889563.1|1141865_1142753_-|ABC-transporter-ATP-binding-protein
MNKLEIENLSKIYGKKVANDKITVTLENGVYGLLGPNGAGKSTLMKQITTLIKPDEGQILYNGEDIFKMDANYRNILGYLPQEFGVYKNFTAKEFLQYIGALKGLRGKYLNSKIGELLDLVGLYDVRNKSIGKFSGGMKRRVGIAQVLLNDPKIIVFDEPTAGIDPQERARFRNLIAKMSRDKIIILSTHIISDIESVAKETIMIKDGKLLMKGTHKDILSHMENKVYNVQVKNECEVDDIQSKYKVVSIQSDIDSVVLRIVSEDIPSGDNIQPVQAKFEDVYMFYFDLEDAREV
>NZ_CP046327.1|WP_009889564.1|1141086_1141860_-|ABC-transporter-permease
MMYLVKAEMIKILKSKSVWIIWLFLIFLGFLLIRKFDVLDTYADIFYKIEGSIPLIGLIMFIITSGNYIKEYDSNMTGLINTTKKGKKSVVLSKLVANGLILSIINISFILLVGIRGFSFFDFKNLNEPIHNLWYFGNSNLNLTVIQMYIIVILTTIFASFIFAQIGLTLSSIFKSAVIPFILGGLIMAIPYFSVGFIPDKAIKFMSVTPNWIMMSQQMVRYNVPSILIVFSIVISIILMIVLTKITYENFTSSKRF
>NZ_CP046327.1|WP_009893221.1|1140249_1140975_-|response-regulator-transcription-factor
MENRVLIIDDEVEILKLLETVLKKEGLNNIYTAKTKKEGLELFKSINPDLIVLDIMLPDGEGYDICKEIRKTSNSPIIFLSAKTEELDKLLGLAIGGDDYVTKPFSPKEVAFRVKAHLRRLSYFSDVQNESKNLNKNEEKIISFGPYILNESRAELIKDGKSIGLSAKELKILSLFAHNQNQIISKEKLWDKVWGEDYVGFDNTIMVHIRKIREKLEDNPSKPEYILTIKGLGYKLAVKED
>NZ_CP046327.1|WP_022619169.1|1152773_1153013_-|hypothetical-protein
MECYLKRTLIIFSKAFLSISFKTRKYLFIVIFILVCPNLSEMIFILVPARRRIIRIDNIVSIYKYVGVLKLINYSILIL
>NZ_CP046327.1|WP_009889556.1|1153224_1154496_+|amidohydrolase-family-protein
MLKVLKGNIIFTKTSETFTVFENSYIILEKGKVKGIFKEIPKEYKNLKVVDYTDKLIIPGMNDLHAHASQFKNLGMAMDKELLPWLETYTFPEESNYKDIEYATKMYKKFVKELWKSGTTRIAVFATVHKEASMKLMDIFKEVGLGAYVGKVNMNMNCPDTLLENTQDSIADTEEIINKYSDTDSIVKPIITPRFIPSCTSELLKGLGDLCLKYNIPMQSHLSENYDEIEWVRSLEPESKFYGDAYNRYNLFGQTPTLMAHCVHCSQDEIDLMRENNVMAVHCPASNFNVGSGAMPIRKLIDNNIRLALGSDISGGHTLSIFKAMVSAIQLSKLYWVNSGKKYNFLSLSEAFYIATKSGGSFFGKVGSFEEGYDFDALIIDDSNLNHDNYSILERLERFIYVGDDRNIIHRYVCGKLIEEPNI
>NZ_CP046327.1|WP_009889555.1|1155134_1155890_-|DUF1835-domain-containing-protein
MAHICFEDICYLLLKEAMKLKLIPHNKIVLFEDDLSIGNIFDVNNYELRENIFKIRNVFENNPKLLFKPDLLEDRKLSKCRNIIIWCANNPKDLCGVYYVVSKFQDKNIKIALVDEKKTEDALIRYSFTSEMSPEDFPFFLDKTLEIGFNEKLEFKNKWDVLVKENSIFRALVGNEIKSVEETYFDKYILRNISDKWQPLIEVVANCMFEDEMRVKDWFILWRLEKMASLKIVKIKGSKGDFYSDKEIRKV
>NZ_CP046327.1|WP_004454504.1|1156228_1156546_+|pyrimidine/purine-nucleoside-phosphorylase
MSEFKNVTAVKKANVYFDGKVSSRVIILPNGERKTLGLMLPGEYTFSTREEEIMEMLAGSMDVKLPGSNEFVTYKEGQKFNVPSDSSFDLKVNEVVDYCCSYIAD
>NZ_CP046327.1|WP_009893215.1|1156631_1158989_-|HAD-IC-family-P-type-ATPase
MDKVNLERYSCDINVGLNKNQLQSRIDDNLINAFDNGKTKTYKQIFKDNIFTLFNLINIVLVCLLVSVGSFKNTLFIFIAVINTIIGVIQEIRAKRLLDNLSVIVSNKVSVIREKEKKEIDVQELVLDDIMILKTGNQICADSKVLNGKLEVNESLVTGESDIIIKNKDDFLYSGSFVVSGEAFVRVENIGKDNYANKIVNDAKISKKHNSQLRNSLNSILKIVGIIIIPLGIILFAKQHFGNGDSIATSVVGTVAAVNGMIPEGLTLLTSIALAVGTIKLASHKTLVQELYCVETLARVDTLCLDKTGTITEGKMQVDDIVMLEEVDINEIMGNICNSLKDDNATLNAIRDKYNVLDTYKAKNLIPFSSERKYSGVTFENKGTYLLGAFEFIFKEKNKKIRIEVEKYSKKGNRVIVLAHSDSYMEDNNIPEDIKPLAFILILDKIRDEAKETLEFFYNEGVDIKIISGDNPITVSEVARKAGLKTASNFIDATTLKNDNDIYEAVDKYSVFGRVSPQQKKQMILALKKQNHTVAMTGDGVNDVLALKEADCSIAMASGSDVTKNVSNLVLLDSNFASMPKVVMEGRKVINNIQRASSLFLVKTIFSFFLSLLTLFFFSRQYPFVPIQLSLIGAVTVGIPSFFLALEANKSRISGNFLLNILKNALPGALCVTVNVIIVYNIVEYLGYSSSVFSTMCAILTGVCGLLILRQQCLPFNKERLFLIVSMTIAFVIGILFLGGLFSFVALSRELILITMALAILMPIMIKVMLFVLDEILETIVPDLN
>NZ_CP046327.1|WP_009889554.1|1159411_1160869_-|glycine-dehydrogenase-subunit-2
MKEYNSLLIDISKKGRKAYSLPKLDIDDIKIEDMIDQDMARQSELNLPEVGELELVRHYTLLSNKNFGVDTGFYPLGSCTMKYNPKINEDMAALPNFTGMHPYQSSDTAQGSLSLMYDLSRRLAEITGMDEVTLQPSAGSHGEFTGLMIIKAYHENRGDHKRTKVIIPDSAHGTNPASAAMANFDVIQIASDKNGAVDINALKEVLNDEVAALMLTNPSTLGLFEKNIKEIATLVHEAGGLLYYDGANMNAIMGITRPGDMGFDVVHLNLHKTFSTPHGGGGPGAGPVGVKKELVPFLPIPLIERKEDKYVLNYDREKSIGKIKNFYGNFGVLVRAYTYILTMGRDGLKEASEMAVLNANYIKESIKDDYILPIDTLCKHEFVLGGLPRGEANIKTIDIAKRLLDYGYHPPTMYFPLIINEALMIEPTESESIETLDSFIEAMKSVAKEAKEEPELLKTAPHNTLVKRVDDARAVKKPILTWSQR
>NZ_CP046327.1|WP_009889553.1|1160868_1163343_-|aminomethyl-transferring-glycine-dehydrogenase-subunit-GcvPA
MNELKRVSLYNIHKELGAKLVEFAGWEMPLEYEGINKEHEKVRKSAGIFDVSHMGEVQIKGAESEKFIQNLVTNDISTLKINDIIYTPMCYENGGVVDDLLIYKFGEEDYLLVINAGNIDKDVAWIIKQSEGYNVDIKNISSEVSQLAIQGPKAEEILQKITDIDLNSIKFYKSIPSTKVCGCPCLVSRTGYTGEDGFEIYCKNKYVEIIWNEVLKVGGEDICPAGLGCRDTLRFEAALPLYGHEINEHISPIEGGLSIFVKTNKESFIGKSILSKEKESGAKRKLVGFEMQGKGMPRNGYDIRIGDKTVGFVTTGCASPTTGKILGMGIIDSEYAKVGNEIGIAIRKKVVPAVIVKKPFYKKQYKKDNIILNKENKFSYIPATSEDKSKMLKVVGLNSVDELFSDIPEEVKLKRDLNLEIGKSELEVSKIVKRLSEENLSLEDLTCFLGAGAYDHYIPSIIKHITSRSEFYTAYTPYQAEISQGTLQVVFEFQSMIAEITGMEIANASMYDGATAAIEACIMAMNQTRKSKIVVSKTIHHETLSVLRTYLQYKDCEIVEIDFCNEYGTTDIEKLKASVDKDTACVLIQTPNFFGIIEEMEEIEKITHENKAMLIMSVDPISLGVLKTPGEIGADIVVGEAQSLGNPLNFGGPYVGFLASKSKYTRKMPGRIVGQSLDVEGKIAYVLTLQTREQHVRREKATSNICSNQALNALVASIYMATMGKEGFKEVGMQSMKKAHYTYNKLVQTGKYKPIFKGKFFKEFAVQGNLNIETINDKLLEENILGGYNLEYNYPELKNSTLLCVTEKRSKEEIDKLVGIMEGL
>NZ_CP046327.1|WP_009889552.1|1164743_1166474_-|Na+/H+-antiporter-NhaC-family-protein
MRNKKINIIFLTTIMFIMSTVMVFAEEDIDTIALANAEKFGILTLIPPLVAIILAFITKNVIISLLIGILSGSFIIKASGINVFATFIQAFLDLVDRALVSLADPWNAGIILQVLAIGGVINLVAKMGGAKAIAEALAKRAKSAKGTQLITWFLGLLVFFDDYANSLIVGPMMRPVADKMKISREKLAFIIDATAAPVAGLAIISTWIGLEVGLIHDAFESISIDVDAFGIFLNTIPFRFYNILILAFIVISALLLKEFGPMRKAEIKSRSRKISIDLDEGVEELDDLAPKNGVKLSVWNAIIPIGTLIIVALASFYYSGYTSIMGGDDKALIQLFTNSPYSFEAIKEAFSASDASRALFQSALVASLVAIIMAVVKKIFTISEAIDVWIDGMKSLVITGVILILAWSLSSVIKELGTAKFLIHLLSGSLPPFLLPSLIFGLGAIISFATGTAYGTMGILMPLAIPLAYSLNPDMSYVIVSTSAVLTGAIFGDHCSPISDTTILSSMGAGCNHIDHVNTQMPYAIFTAVITIVFGYIPAGLGLPIYIVLPVAIAAIFVGIQIIGKKVDEAEIELVE
>NZ_CP046327.1|WP_009889551.1|1166957_1167944_+|lipoate--protein-ligase
MLLIYNEKTNPYFNLAMEEYLLKNFDEDLFILWRNEPSIIVGKNQNTLSEINLEYIKEYSIPVVRRQSGGGAVFHDLGNINFTFIACNNNNFSDFRRFTQPIIDLLKTLDVNAEFSGRNDLLIDGKKFSGNAQYNYKNKVMHHGTLLFSSEINDLSKALKVKPIKFEGKGIKSVKSRVTNISEHLHSKMDILEFKDAIMDYLSKTNTDNTNYCLNEHDIKQIEKLTKSKYETWDWNFGNSPKYTLSNELKYSGGNVEFNLNVDKGIITSIKFFGDFFGKCDVAFVENKLIGIRHEENALRNTLDSIEINDYFLGADTDILVSGILGVK
>NZ_CP046327.1|WP_003420312.1|1168253_1169051_+|lipoprotein
MKFKKLLCLLLCLVLTLAVVGCSKAKDDKKIVVGATLVPGGELLEELKPLIKEKGYTLEVKNFDDYILPNEALNNGEIDANLFQHEPYLKEAVKAKGYKIMAGKKLYVCPAILYSYKIKSVDEFKKGDTIAISNNPSSCSKNLRYLESIGLLTLPKGDGLVSPKDIIENPKGIQFKELDIAQIPSSLPDVTAAFIDTTYAVPAGLDAKKNGIYTAPINDEYANLLAFRTEDKDSEKIKVLQDVLTSDKARSLIEEKYKGIVIPTF

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Crispr_ID: NZ_CP046327_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046327_4

1289856-1290146

Orphan

I-A

Consensus_repeat	Method
GATTTACATTCCATATAGTTAATATAAAAC	CRISPRCasFinder
ATTTACATTCCANATAGTTAATATAAAAC	CRT
GTTTTATATTAACTATATGGAATGTAAAT	PILER-CR

4 spacers

The CRISPR arrays of NZ_CP046327_4

>merge|NZ_CP046327|4|1289856-1290146|CRISPRCasFinder,CRT,PILER-CR
AATTTTAAGTCCACATAGTTAATATAAAACCTTCTGATTTAGCAAATAAAGCTGTAAATAAGTCTTTTACATACCACATAGTTAATATAAAACACTGATGTTACAGATTCGTTGTATGTCTTGGGAGCTGTATTTACATTCCATATAGTTAATATAAAACGTGATGCTATGTGTATAAAGACAACTACTAATGTTGATTTACATTCCATATAGTTAATATAAAACTTGATGTTTCAATCTTAAATACACTACCATTACAAAGATTTACATTCCATATAGTTAATATAAAAC

>NZ_CP046327|4|4|1289856-1290146|CRISPRCasFinder
AATTTTAAGTCCACATAGTTAATATAAAAC	CTTCTGATTTAGCAAATAAAGCTGTAAATAAGT
CTTTTACATACCACATAGTTAATATAAAAC	ACTGATGTTACAGATTCGTTGTATGTCTTGGGAGCTG
TATTTACATTCCATATAGTTAATATAAAAC	GTGATGCTATGTGTATAAAGACAACTACTAATGTT
GATTTACATTCCATATAGTTAATATAAAAC	TTGATGTTTCAATCTTAAATACACTACCATTACAAA
GATTTACATTCCATATAGTTAATATAAAAC

>NZ_CP046327|4|3|1289857-1290146|CRT
ATTTTAAGTCCACATAGTTAATATAAAAC	CTTCTGATTTAGCAAATAAAGCTGTAAATAAGTC
TTTTACATACCACATAGTTAATATAAAAC	ACTGATGTTACAGATTCGTTGTATGTCTTGGGAGCTGT
ATTTACATTCCATATAGTTAATATAAAAC	GTGATGCTATGTGTATAAAGACAACTACTAATGTTG
ATTTACATTCCATATAGTTAATATAAAAC	TTGATGTTTCAATCTTAAATACACTACCATTACAAAG
ATTTACATTCCATATAGTTAATATAAAAC

>NZ_CP046327|4|3|1289921-1290146|PILER-CR
TTTACATACCACATAGTTAATATAAAACA	CTGATGTTACAGATTCGTTGTATGTCTTGGGAGCTGTA
TTTACATTCCATATAGTTAATATAAAACG	TGATGCTATGTGTATAAAGACAACTACTAATGTTGA
TTTACATTCCATATAGTTAATATAAAACT	TGATGTTTCAATCTTAAATACACTACCATTACAAAGA
TTTACATTCCATATAGTTAATATAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046327.1\|WP_009888851.1\|1282574_1282994_-\|DUF2634-domain-containing-protein	unknown	unknown	gnl\|CDD\|378510
NZ_CP046327.1\|WP_003433579.1\|1280914_1281532_-\|YmfQ-family-protein	unknown	unknown	gnl\|CDD\|378379
NZ_CP046327.1\|WP_009888852.1\|1281524_1282574_-\|baseplate-J/gp47-family-protein	unknown	unknown	gnl\|CDD\|377414
NZ_CP046327.1\|WP_009888843.1\|1294122_1294950_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046327.1\|WP_009888849.1\|1285157_1285847_-\|LysM-peptidoglycan-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|236880
NZ_CP046327.1\|WP_009888848.1\|1288301_1289069_-\|DUF4428-domain-containing-protein	unknown	unknown	gnl\|CDD\|373083
NZ_CP046327.1\|WP_003429858.1\|1291583_1291772_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046327.1\|WP_009888847.1\|1289206_1289734_-\|DUF4352-domain-containing-protein	unknown	unknown	gnl\|CDD\|378684
NZ_CP046327.1\|WP_003429855.1\|1293108_1293270_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046327.1\|WP_009888845.1\|1290598_1291465_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|214989
NZ_CP046327.1\|WP_009888842.1\|1295008_1295479_-\|phage-tail-tube-protein	unknown	unknown	gnl\|CDD\|378178
NZ_CP046327.1\|WP_009888853.1\|1279877_1280903_-\|phage-tail-protein	unknown	unknown	gnl\|CDD\|372197
NZ_CP046327.1\|WP_003429853.1\|1293610_1294051_-\|phage-portal-protein	unknown	unknown	gnl\|CDD\|378084
NZ_CP046327.1\|WP_009888840.1\|1296806_1296983_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046327.1\|WP_009893136.1\|1295495_1296806_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377435
NZ_CP046327.1\|WP_009893138.1\|1285863_1288236_-\|tape-measure-protein	unknown	unknown	gnl\|CDD\|131723
NZ_CP046327.1\|WP_011861033.1\|1293416_1293611_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274054
NZ_CP046327.1\|WP_009893142.1\|1282998_1283259_-\|DUF2577-domain-containing-protein	unknown	unknown	gnl\|CDD\|378501
NZ_CP046327.1\|WP_009893140.1\|1283272_1285165_-\|cell-wall-hydrolase	unknown	unknown	gnl\|CDD\|366353
NZ_CP046327.1\|WP_009888846.1\|1290411_1290546_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP046327.1\|WP_009888851.1\|1282574_1282994_-\|DUF2634-domain-containing-protein	gnl\|CDD\|378510	pfam10934, DUF2634, Protein of unknown function (DUF2634). Some members in this family of proteins are annotated as phage related, xkdS however currently there is no known function.	9.64514e-34
NZ_CP046327.1\|WP_003433579.1\|1280914_1281532_-\|YmfQ-family-protein	gnl\|CDD\|378379	pfam10076, DUF2313, Uncharacterized protein conserved in bacteria (DUF2313). Members of this family of proteins comprise various hypothetical and putative bacteriophage tail proteins.	1.41324e-41
NZ_CP046327.1\|WP_009888852.1\|1281524_1282574_-\|baseplate-J/gp47-family-protein	gnl\|CDD\|377414	pfam04865, Baseplate_J, Baseplate J-like protein. The P2 bacteriophage J protein lies at the edge of the baseplate. This family also includes a number of bacterial homologs, which are thought to have been horizontally transferred.	9.53327e-51
NZ_CP046327.1\|WP_009888848.1\|1288301_1289069_-\|DUF4428-domain-containing-protein	gnl\|CDD\|373083	pfam14471, DUF4428, Domain of unknown function (DUF4428). This putative zinc finger domain is found in uncharacterized bacterial proteins.	3.64056e-09
NZ_CP046327.1\|WP_009893136.1\|1295495_1296806_-\|hypothetical-protein	gnl\|CDD\|377435	pfam04984, Phage_sheath_1, Phage tail sheath protein subtilisin-like domain. This entry represents the second domain in a variety of phage tail sheath proteins. According to ECOD this domain has a subtilisin-like structure.	2.06012e-36
NZ_CP046327.1\|WP_009888847.1\|1289206_1289734_-\|DUF4352-domain-containing-protein	gnl\|CDD\|378684	pfam11611, DUF4352, Domain of unknown function (DUF4352). Members of these family are putative lipoproteins that fall into the Antigen MPT63/MPB63 (immunoprotective extracellular protein) superfamily.	2.90312e-17
NZ_CP046327.1\|WP_009888845.1\|1290598_1291465_-\|hypothetical-protein	gnl\|CDD\|214989	smart01040, Bro-N, BRO family, N-terminal domain. This family includes the N-terminus of baculovirus BRO and ALI motif proteins. The function of BRO proteins is unknown. It has been suggested that BRO-A and BRO-C are DNA binding proteins that influence host DNA replication and/or transcription. This Pfam domain does not include the characteristic invariant alanine, leucine, isoleucine motif of the ALI proteins.	2.45371e-10
NZ_CP046327.1\|WP_009888842.1\|1295008_1295479_-\|phage-tail-tube-protein	gnl\|CDD\|378178	pfam09393, DUF2001, Phage tail tube protein. This is a family of phage tail tube proteins including protein XkdM from phage-like element PBSX protein whose structure adopts a beta barrel flanked with alpha helical regions.	6.78448e-58
NZ_CP046327.1\|WP_009888853.1\|1279877_1280903_-\|phage-tail-protein	gnl\|CDD\|372197	pfam12571, DUF3751, Phage tail-collar fibre protein. This domain family is found in bacteria and viruses, and is approximately 160 amino acids in length. There are two completely conserved residues (K and W) that may be functionally important. The members are annotated as being putative phage tail or tail-collar proteins.	2.55918e-57
NZ_CP046327.1\|WP_003429853.1\|1293610_1294051_-\|phage-portal-protein	gnl\|CDD\|378084	pfam08890, Phage_TAC_5, Phage XkdN-like tail assembly chaperone protein, TAC. This is a family of phage tail assembly chaperone proteins, TACs, from Gram-positive bacteriophages, in particular PBSX from Firmicutes.	8.20802e-57
NZ_CP046327.1\|WP_009893138.1\|1285863_1288236_-\|tape-measure-protein	gnl\|CDD\|131723	TIGR02675, Mu-like_prophage_FluMu_protein_gp42, tape measure domain. Proteins containing this domain are strictly bacterial, including bacteriophage and prophage regions of bacterial genomes. Most members are 800 to 1800 amino acids long, making them among the longest predicted proteins of their respective phage genomes, where they are encoded in tail protein regions. This roughly 80-residue domain described here usually begins between residue 100 and 250. Many members are known or predicted to act as phage tail tape measure proteins, a minor tail component that regulates tail length.	6.69895e-19
NZ_CP046327.1\|WP_011861033.1\|1293416_1293611_-\|hypothetical-protein	gnl\|CDD\|274054	TIGR02247, Hypothetical_protein_K09H11.1, epoxide hydrolase N-terminal domain-like phosphatase. This model represents a small clade of sequences including C. elegans and mammalian sequences as well as a small number of bacteria. In eukaryotes, this domain exists as an N-terminal fusion to the soluble epoxide hydrolase enzyme and has recently been shown to be an active phosphatase, although the nature of the biological substrate is unclear. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.	0.00562027
NZ_CP046327.1\|WP_009888849.1\|1285157_1285847_-\|LysM-peptidoglycan-binding-domain-containing-protein	gnl\|CDD\|236880	PRK11198, PRK11198, LysM domain/BON superfamily protein; Provisional.	3.33831e-11
NZ_CP046327.1\|WP_009893140.1\|1283272_1285165_-\|cell-wall-hydrolase	gnl\|CDD\|366353	pfam00877, NLPC_P60, NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins.	1.81119e-27
NZ_CP046327.1\|WP_009893142.1\|1282998_1283259_-\|DUF2577-domain-containing-protein	gnl\|CDD\|378501	pfam10844, DUF2577, Protein of unknown function (DUF2577). This family of proteins has no known function.	4.03103e-19

>NZ_CP046327.1|WP_009888847.1|1289206_1289734_-|DUF4352-domain-containing-protein
MREGKRRRGCLFWFILIILFSGVVGAIAGNSTNNESTEKQKEDLTKYIGEEGSIGDLKLTVNSISKASEISVASGYLAYTPDSGKYGIINLTIKNQTKESQSFMLNSFTLIGPDDSKYVPSLLIDVGNKYITMDTVNPNLDVTGNIAFEIPKDLLVSDCKLKYSGSEQEFILKEK
>NZ_CP046327.1|WP_009888848.1|1288301_1289069_-|DUF4428-domain-containing-protein
MGLFGKKKADICCICNTEIGVLNIEDGWICNSCFKEYCDALSMTKAPKILRKLDIEKTISSTKKNNELQKIFNTTNNIENYIEFDEDNKKWLVSKKSINDKKTPIIHSYEDIVKFELLENGETVTKGGIGRALAGGILFGEAGAIVGGITGKKTTRKVVDTFKIKITINNIDNPIEYIELINKKTKTNSSAYEKAYKDAHKILSTLSAITQSIKETDNINTKSVADEILKYKNLLDMEAITQDEFNTKKKELLNL
>NZ_CP046327.1|WP_009893138.1|1285863_1288236_-|tape-measure-protein
MATIQTSIKIFDGMTPAFRNMTTSINTTINSLERLQQRLHNPLNTGGIQASQQSLNNIENILTRIEQKIGRNTNEQENFNNKIKQGSEAGSLLVSKLKSLAGIYIGIRGIESITKAADTIASTKARLNLMNDGLQTTEQLNKMIYLSAQSARASYADTAAQVAKLGILAGDAFGSSAEVIKFTELMNKAFVIGGTSANEASAAMYQLTQAMGAGKLQGDEFRSIMENAPLLATKIADAMGKTKDQLKELSSSGAITADVIRNALFKASDEIEKKFASMPVTFSQALTMMKNDAYMIFGQTLGKISGALQSVRFSEIVVSIRNVMIAISSNIYDTLNIIKNILNSEFFSNLVQGFTFCAVVITKSLGSIVNTALNIVNIFAQNWSIIKPIVFGVASVFILFRGVLLATKIATIGNVIANVAHAASSSLSALMTNIQAAALMRSNGATLSATIATWGLNAALLACPITWVVLGILAFVVVVFVAVAAVNKFAGTSLTALGVIVGAVFAAVAAIQNVMIWLLNGCIAVNEGITNGWNQCVYLMKQAIAKGVIFIIEKMASLNNSVNNAGNALGKAFIDGANIAIRGVNKLIDLINKIPGINIGKVGEATFTPVKADNSYIKQQIDSLNRWVGDAPEKVKLERMGYKDIGAAFQKGNALGTKWQNAITDKFKDTFDINKMLEDAKKKLGLDDLWNKQNPLNNLGGFGGDLGKNVKDTAGNTAKMAKTMDKSQEDLKYLRDIAEQETINRFTGVNIKIDMNNTNNISKDTDVDGIVNVLTEKLNDAMVVSAEGIV
>NZ_CP046327.1|WP_009888849.1|1285157_1285847_-|LysM-peptidoglycan-binding-domain-containing-protein
MAYDFYLDGVQLPIAPPKLEVKVTNKNKTVDLINTGEVNILKKEGLSEISFEAEFTHNKLPFCRGQFRDVQFFLSKLELLKTDCKPFQFIVSRELGNKVLFNTNIKVSLEEYAISEDADNGSDTKVAIKLKQYRDYSTKKLVLAPPKNETGRPNVKIEPKRVDSVNATNTKTYTVKAGDSLWSICQKQLGNGSLYKKVYELNKSMMDKANKGKNLSKYTIYKGQVLKLG
>NZ_CP046327.1|WP_009893140.1|1283272_1285165_-|cell-wall-hydrolase
MVDELVLANDRDVRLVIAHWEDFYEPAVIDGITWEIERRGTPSKLEFTIVMDDILEFCEGNSVRLYYKGIGIFYGYIFQKKRDKENHIKIVAYDQLRYFKNKDTYVYSNKTASELVKILAKDFNLKYNVIEDTKYKISRVEENKTLFDMILTALDDTLREKKEMYTLYDDFGRITLKNVASMKLDTVMNNDVIEDFDYNSSIDSDTYTKIKLVRDNEESGKRDVYIAQDSAHMRSWGILQMFDTVDKNMSEAEIKQKCDILLKLYNKKTKSLSLKNALGDIRVRAGCLVPVFLNLGDIELQNYMLVEKVKHTFENNSHFMDLTLVDGDEFASYSSSSYSSGNTNNKDEKKNGPAQSIMKKNTGKKVPAIFTAYYPGNNAMEGGKTDCNGKPLDVKSRTVAGPMNREGVKKTWYTDDFLNKHPVFEYGDKVKIILPGTAYDNKVYTVKDNGGRIYVETNGTYHIDILLANASECKKFGRKNGYIIIGGDEEQTYQVEGNNQSNTNNNSKEDKLISIAKSKLGCNYVYGAEGPNNFDCSGFTQWCYKQIGIKIPRTASAQSKAGKAVDLKDRSKWKAGDLLCRIGGGSSNHVVMYIGNNQIIHSPQTGDVVKIESVNSYRKGKAYTHVRRFI
>NZ_CP046327.1|WP_009893142.1|1282998_1283259_-|DUF2577-domain-containing-protein
MSQDLLQIIKKAAMDAVETSNPMRVVFGTIESISPLRVKIEQKLSIGEIFLIQTDTFKRYTDKKMGDKLVLIRMQGGQQYLILDRM
>NZ_CP046327.1|WP_009888851.1|1282574_1282994_-|DUF2634-domain-containing-protein
MLPSDNLDYDIEDVSIINFDVRQEPSKTFKLHIEKSKIDGICDDVEALKQTIFLILNTERYEHLIYSRNYGVELNDLIGEPISYVIPELERRITEALIQDDRIENIDNFEFQNIKGKVQCRFSVHTKYGNIKAEKVVSV
>NZ_CP046327.1|WP_009888852.1|1281524_1282574_-|baseplate-J/gp47-family-protein
MFELMTFENIIKRMLDSVPDTFDKREGSIIYNALAPVAIELTETYIAMDELLDQTFVDTASYYYLEKRCKERGITPLEATHTIAKGVFNIDIPLDSRFNLGEYNYVAIERISEKTYKMKCETTGPVFELGKLIPIEYIDGLETAELTEILINGEDEESEDSLRQRYYDSLNSQSFGGNIQNYRDEVNKIQDVGGVKVYPTWDGGGTVKLVIINSNFKVPSEELVNLVQEEIDPIGHQGEGLGLAPIGHRVTVEGVTSTTINISAEITYKNGYTWENIKSIAEEAIDDYLNELNMSWEDEENLIVRISQIETRLLSIDGVLDIANTMINDVKSNLTIDSNSIVVRGEVVG
>NZ_CP046327.1|WP_003433579.1|1280914_1281532_-|YmfQ-family-protein
MDKEINLINYLPQILQDKEEYIKVFNVENKEIKTLHDKLKDLSNDQFLEDLTISGIKRWEKIMSITPKSNESLEDRRFRIFSKYISKLPYSERFLRNWLDNVVGEGNYELTINNATYNIHLESDARNQDWFEEVHSFVSNIKPCNMTLDYTRVLISKDNYMNFGITTLMGQEITIYPWSPPDIETYGEIDVLTGNGVGYQEITIF
>NZ_CP046327.1|WP_009888853.1|1279877_1280903_-|phage-tail-protein
MAIDKSYYTIITDVGKAKIANASVTGNKVGFVKIQLGDGGGSEYTPTESQTELKNVVWEGNIGNTTTDETAPNCIILESLIPSSVGGFMIREIGYLDDENNLIAISKYKECYKPSIEQGAVVDMKVKTVLIVSNINNIELKIDPTIIFATLKDIQDLDAKISNVNTKIDTTKTELTSNIETAKTELNTRIDTENEKQNIKIDQLIAGGSNVASTQTITIDDWIDNQEGGFKATVTHGLLTQRITVSIIDATTKDNVVPDFTIIDDNSIEVRSGVKVELNVYVINGNAETHFINATVDDNRVSEMTTYSSKKIHEEIGKVAEQLTGINSNIISTVNNDILPI
>NZ_CP046327.1|WP_009888846.1|1290411_1290546_-|hypothetical-protein
MHENLLDSIDIEKRKEEFRIKLLKIRETDIDIYNKIESIVYKLS
>NZ_CP046327.1|WP_009888845.1|1290598_1291465_-|hypothetical-protein
MKNLIVKEFNGSQIYTFMWKEKSCWIANQIVGLFDYADVSKTIQDCIKAEDFEIEQEYDVLKGNEFNDFVTTLNVVANNIISNKARSITIFYEDGLYGFLQYTDKPIGVQFRKWLRREVLPSIRQTGAYITNNANPEKLREKASEIEKLQLAYNSTSMLKELLDGAGFDNKSKLLTAKTLYKKAGIDLPIEINEEEHYFDTKQIASKLKIYSKSNKPAQLAVCEIIKKIDLEENEVKGVWETNGSWTGTVNKYTKSVIDKVRNWIEENNRPTKIAGEKKNYHVVYKIE
>NZ_CP046327.1|WP_003429858.1|1291583_1291772_-|hypothetical-protein
MKIITDSSRADYFKQRRQNKKTFSVLLDREKVEKIEEHLKKQNKTKTIWLEEKINEELEKEE
>NZ_CP046327.1|WP_003429855.1|1293108_1293270_-|hypothetical-protein
MNNFLLNVIAGVIASLIFCLICKVFLKVKSHSTRGKSKSGWEFDFKIKFHKFK
>NZ_CP046327.1|WP_011861033.1|1293416_1293611_-|hypothetical-protein
MRGGDFDASITHYCIQKLKWKPSEYMNLEVNERALAAASILIKIEDEEEAMKEAERERKRGRRR
>NZ_CP046327.1|WP_003429853.1|1293610_1294051_-|phage-portal-protein
MSNLSAFLSQNAIKVDNVKYVASNRFLDKEGKPVEWELKVLSSEEDEALRRKCTKRVKVIGNNGKHTGQYTSEIDYNSYVAELCVASTVFPDLKDAELQNSYGVMGEAQLLKTMLTAGEYVNYTVKVNEVNGFDTSFEDKVEEAKN
>NZ_CP046327.1|WP_009888843.1|1294122_1294950_-|hypothetical-protein
MEFESGIKLGKLTLIKYLGRNKHSKKVWLCQCECGNKVERVENNLKQSIKNEKPPHCGCSPNWKGQNKRFKDITGKTFGKLTVLKMSGKDKYSHNLWLCQCECGNRTITSTSALEQGKAQSCGCIRKEILLERSTTHNKSNDSLYRVYHRMIKRCTNKSNKDYNYYGGRGIEVCNEWLEDFINFYNWSIENGYRKGLTIDRINVNGNYEPSNCRWVTWEVQRNNKRNSIRVNYKGEMITLKQCAENLNVKYLFLYNQLVTKKIPLEEVIKNIGME
>NZ_CP046327.1|WP_009888842.1|1295008_1295479_-|phage-tail-tube-protein
MAQTINAKDTVSAKKAECFITIEGKRYNFMQAIDLEAKMEKNKSEVPILGRTTKGNKTTGSTNTGSATFHYNTSIFRELLYRYKETGEDIYFDIQVTNEDPTSAVGRQTVVLKDCNMDSGIITKFDADGEYLDEDMDFTFEDWELVESFALLNGML
>NZ_CP046327.1|WP_009893136.1|1295495_1296806_-|hypothetical-protein
MALGGGTFVTQNKILPGAYINFISAKRATSSLSDRGIVAMPLELDWGIDEEAFQVTSDDFEKYSVKYFGYDYTHEKLKGLRDLFKNIRLGYFYKLNKGVKASCTIATAKYSGIRGNDLKVTVTTNIDDNAKFDVVILLDNKKVDTQIAKVITDLQDNDYITWKKDATLEASAGLVFTGGTNGEAVTGAEYQAFLDKIESYSFNALGCLATTTEIKSLFVEFTKRMRDKVGAKFQTVLYKKSDADYEGVVSIENKIKDKDLVESSLIYWATGAIAGCDINKSNTNKKYDGEFDVDVNYTQIQLEEALKTGKFIFHKVGDEVHVLEDINTFVSFTDDKNDDFSSNQSVRVLDQIANDIATLFNEKYLGKVPNDKAGRISFWNDVVKHHKELENIRAIEDFKTDDVSVELGNDKKTVIVSDAIKVINAMSKLYMTVSVN
>NZ_CP046327.1|WP_009888840.1|1296806_1296983_-|hypothetical-protein
MSKALSKEDNYKFTKEQIVNSKKYVNRKDLLNAILKENELYSFSEVEDRINKFMKGVS

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Crispr_ID: NZ_CP046327_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046327_5

1292011-1292367

Orphan

I-A

Consensus_repeat	Method
ATTTACATTCCATATAGTTAATCTAAAAC	CRISPRCasFinder
ATTTACATTCCATATAGTTAATCTAAAAC	CRT
GTTTTAGATTAACTATATGGAATGTAAAT	PILER-CR

5 spacers

The CRISPR arrays of NZ_CP046327_5

>merge|NZ_CP046327|5|1292011-1292367|CRISPRCasFinder,CRT,PILER-CR
ATTTTGAATCCACATAGTTAATATAAAACATTCAAGAAGTAACTGTAATTGTTCATCTGTAAAATAATTTACATTCCATATAGTTAATCTAAAACGATAGACAAAGCTAGTGCAGACGCTAAAGTACAATCATTTACATTCCATATAGTTAATCTAAAACCTTTCATAACTGATGTTAAAGACTCATTATATGTACTATTTACATTCCATATAGTTAATCTAAAACGAGTGTTACATCGACAATAAAGCTTATTCTCACTGAAATTTACATTCCATATAGTTAATCTAAAACAGAAAGATTAAAAAATAGAATGATACTTCTTACAACATTTACATTCCATATAGTTAATCTAAAAC

>NZ_CP046327|5|5|1292011-1292367|CRISPRCasFinder
ATTTTGAATCCACATAGTTAATATAAAAC	ATTCAAGAAGTAACTGTAATTGTTCATCTGTAAAATA
ATTTACATTCCATATAGTTAATCTAAAAC	GATAGACAAAGCTAGTGCAGACGCTAAAGTACAATC
ATTTACATTCCATATAGTTAATCTAAAAC	CTTTCATAACTGATGTTAAAGACTCATTATATGTACT
ATTTACATTCCATATAGTTAATCTAAAAC	GAGTGTTACATCGACAATAAAGCTTATTCTCACTGAA
ATTTACATTCCATATAGTTAATCTAAAAC	AGAAAGATTAAAAAATAGAATGATACTTCTTACAAC
ATTTACATTCCATATAGTTAATCTAAAAC

>NZ_CP046327|5|4|1292011-1292367|CRT
ATTTTGAATCCACATAGTTAATATAAAAC	ATTCAAGAAGTAACTGTAATTGTTCATCTGTAAAATA
ATTTACATTCCATATAGTTAATCTAAAAC	GATAGACAAAGCTAGTGCAGACGCTAAAGTACAATC
ATTTACATTCCATATAGTTAATCTAAAAC	CTTTCATAACTGATGTTAAAGACTCATTATATGTACT
ATTTACATTCCATATAGTTAATCTAAAAC	GAGTGTTACATCGACAATAAAGCTTATTCTCACTGAA
ATTTACATTCCATATAGTTAATCTAAAAC	AGAAAGATTAAAAAATAGAATGATACTTCTTACAAC
ATTTACATTCCATATAGTTAATCTAAAAC

>NZ_CP046327|5|4|1292077-1292367|PILER-CR
ATTTACATTCCATATAGTTAATCTAAAAC	GATAGACAAAGCTAGTGCAGACGCTAAAGTACAATC
ATTTACATTCCATATAGTTAATCTAAAAC	CTTTCATAACTGATGTTAAAGACTCATTATATGTACT
ATTTACATTCCATATAGTTAATCTAAAAC	GAGTGTTACATCGACAATAAAGCTTATTCTCACTGAA
ATTTACATTCCATATAGTTAATCTAAAAC	AGAAAGATTAAAAAATAGAATGATACTTCTTACAAC
ATTTACATTCCATATAGTTAATCTAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046327.1\|WP_009888851.1\|1282574_1282994_-\|DUF2634-domain-containing-protein	unknown	unknown	gnl\|CDD\|378510
NZ_CP046327.1\|WP_009888843.1\|1294122_1294950_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046327.1\|WP_009888848.1\|1288301_1289069_-\|DUF4428-domain-containing-protein	unknown	unknown	gnl\|CDD\|373083
NZ_CP046327.1\|WP_009888846.1\|1290411_1290546_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046327.1\|WP_003429858.1\|1291583_1291772_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046327.1\|WP_009888847.1\|1289206_1289734_-\|DUF4352-domain-containing-protein	unknown	unknown	gnl\|CDD\|378684
NZ_CP046327.1\|WP_009888838.1\|1297761_1298568_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046327.1\|WP_009888839.1\|1296975_1297413_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046327.1\|WP_009888845.1\|1290598_1291465_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|214989
NZ_CP046327.1\|WP_009888842.1\|1295008_1295479_-\|phage-tail-tube-protein	unknown	unknown	gnl\|CDD\|378178
NZ_CP046327.1\|WP_003429855.1\|1293108_1293270_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046327.1\|WP_003429853.1\|1293610_1294051_-\|phage-portal-protein	unknown	unknown	gnl\|CDD\|378084
NZ_CP046327.1\|WP_009888840.1\|1296806_1296983_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046327.1\|WP_009893136.1\|1295495_1296806_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377435
NZ_CP046327.1\|WP_009893138.1\|1285863_1288236_-\|tape-measure-protein	unknown	unknown	gnl\|CDD\|131723
NZ_CP046327.1\|WP_011861033.1\|1293416_1293611_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274054
NZ_CP046327.1\|WP_009888849.1\|1285157_1285847_-\|LysM-peptidoglycan-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|236880
NZ_CP046327.1\|WP_009893140.1\|1283272_1285165_-\|cell-wall-hydrolase	unknown	unknown	gnl\|CDD\|366353
NZ_CP046327.1\|WP_009893135.1\|1298677_1298968_-\|HK97-gp10-family-phage-protein	unknown	unknown	gnl\|CDD\|377415
NZ_CP046327.1\|WP_009893142.1\|1282998_1283259_-\|DUF2577-domain-containing-protein	unknown	unknown	gnl\|CDD\|378501

Protein	Function_ID	Function_description	E-value
NZ_CP046327.1\|WP_009888851.1\|1282574_1282994_-\|DUF2634-domain-containing-protein	gnl\|CDD\|378510	pfam10934, DUF2634, Protein of unknown function (DUF2634). Some members in this family of proteins are annotated as phage related, xkdS however currently there is no known function.	9.64514e-34
NZ_CP046327.1\|WP_009888848.1\|1288301_1289069_-\|DUF4428-domain-containing-protein	gnl\|CDD\|373083	pfam14471, DUF4428, Domain of unknown function (DUF4428). This putative zinc finger domain is found in uncharacterized bacterial proteins.	3.64056e-09
NZ_CP046327.1\|WP_009893136.1\|1295495_1296806_-\|hypothetical-protein	gnl\|CDD\|377435	pfam04984, Phage_sheath_1, Phage tail sheath protein subtilisin-like domain. This entry represents the second domain in a variety of phage tail sheath proteins. According to ECOD this domain has a subtilisin-like structure.	2.06012e-36
NZ_CP046327.1\|WP_009893138.1\|1285863_1288236_-\|tape-measure-protein	gnl\|CDD\|131723	TIGR02675, Mu-like_prophage_FluMu_protein_gp42, tape measure domain. Proteins containing this domain are strictly bacterial, including bacteriophage and prophage regions of bacterial genomes. Most members are 800 to 1800 amino acids long, making them among the longest predicted proteins of their respective phage genomes, where they are encoded in tail protein regions. This roughly 80-residue domain described here usually begins between residue 100 and 250. Many members are known or predicted to act as phage tail tape measure proteins, a minor tail component that regulates tail length.	6.69895e-19
NZ_CP046327.1\|WP_009888845.1\|1290598_1291465_-\|hypothetical-protein	gnl\|CDD\|214989	smart01040, Bro-N, BRO family, N-terminal domain. This family includes the N-terminus of baculovirus BRO and ALI motif proteins. The function of BRO proteins is unknown. It has been suggested that BRO-A and BRO-C are DNA binding proteins that influence host DNA replication and/or transcription. This Pfam domain does not include the characteristic invariant alanine, leucine, isoleucine motif of the ALI proteins.	2.45371e-10
NZ_CP046327.1\|WP_009888842.1\|1295008_1295479_-\|phage-tail-tube-protein	gnl\|CDD\|378178	pfam09393, DUF2001, Phage tail tube protein. This is a family of phage tail tube proteins including protein XkdM from phage-like element PBSX protein whose structure adopts a beta barrel flanked with alpha helical regions.	6.78448e-58
NZ_CP046327.1\|WP_003429853.1\|1293610_1294051_-\|phage-portal-protein	gnl\|CDD\|378084	pfam08890, Phage_TAC_5, Phage XkdN-like tail assembly chaperone protein, TAC. This is a family of phage tail assembly chaperone proteins, TACs, from Gram-positive bacteriophages, in particular PBSX from Firmicutes.	8.20802e-57
NZ_CP046327.1\|WP_009893135.1\|1298677_1298968_-\|HK97-gp10-family-phage-protein	gnl\|CDD\|377415	pfam04883, HK97-gp10_like, Bacteriophage HK97-gp10, putative tail-component. This family of proteins is found in the caudovirales. It may be a tail component.	1.77732e-13
NZ_CP046327.1\|WP_011861033.1\|1293416_1293611_-\|hypothetical-protein	gnl\|CDD\|274054	TIGR02247, Hypothetical_protein_K09H11.1, epoxide hydrolase N-terminal domain-like phosphatase. This model represents a small clade of sequences including C. elegans and mammalian sequences as well as a small number of bacteria. In eukaryotes, this domain exists as an N-terminal fusion to the soluble epoxide hydrolase enzyme and has recently been shown to be an active phosphatase, although the nature of the biological substrate is unclear. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.	0.00562027
NZ_CP046327.1\|WP_009888849.1\|1285157_1285847_-\|LysM-peptidoglycan-binding-domain-containing-protein	gnl\|CDD\|236880	PRK11198, PRK11198, LysM domain/BON superfamily protein; Provisional.	3.33831e-11
NZ_CP046327.1\|WP_009893140.1\|1283272_1285165_-\|cell-wall-hydrolase	gnl\|CDD\|366353	pfam00877, NLPC_P60, NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins.	1.81119e-27
NZ_CP046327.1\|WP_009888847.1\|1289206_1289734_-\|DUF4352-domain-containing-protein	gnl\|CDD\|378684	pfam11611, DUF4352, Domain of unknown function (DUF4352). Members of these family are putative lipoproteins that fall into the Antigen MPT63/MPB63 (immunoprotective extracellular protein) superfamily.	2.90312e-17
NZ_CP046327.1\|WP_009893142.1\|1282998_1283259_-\|DUF2577-domain-containing-protein	gnl\|CDD\|378501	pfam10844, DUF2577, Protein of unknown function (DUF2577). This family of proteins has no known function.	4.03103e-19

>NZ_CP046327.1|WP_003429858.1|1291583_1291772_-|hypothetical-protein
MKIITDSSRADYFKQRRQNKKTFSVLLDREKVEKIEEHLKKQNKTKTIWLEEKINEELEKEE
>NZ_CP046327.1|WP_009888845.1|1290598_1291465_-|hypothetical-protein
MKNLIVKEFNGSQIYTFMWKEKSCWIANQIVGLFDYADVSKTIQDCIKAEDFEIEQEYDVLKGNEFNDFVTTLNVVANNIISNKARSITIFYEDGLYGFLQYTDKPIGVQFRKWLRREVLPSIRQTGAYITNNANPEKLREKASEIEKLQLAYNSTSMLKELLDGAGFDNKSKLLTAKTLYKKAGIDLPIEINEEEHYFDTKQIASKLKIYSKSNKPAQLAVCEIIKKIDLEENEVKGVWETNGSWTGTVNKYTKSVIDKVRNWIEENNRPTKIAGEKKNYHVVYKIE
>NZ_CP046327.1|WP_009888846.1|1290411_1290546_-|hypothetical-protein
MHENLLDSIDIEKRKEEFRIKLLKIRETDIDIYNKIESIVYKLS
>NZ_CP046327.1|WP_009888847.1|1289206_1289734_-|DUF4352-domain-containing-protein
MREGKRRRGCLFWFILIILFSGVVGAIAGNSTNNESTEKQKEDLTKYIGEEGSIGDLKLTVNSISKASEISVASGYLAYTPDSGKYGIINLTIKNQTKESQSFMLNSFTLIGPDDSKYVPSLLIDVGNKYITMDTVNPNLDVTGNIAFEIPKDLLVSDCKLKYSGSEQEFILKEK
>NZ_CP046327.1|WP_009888848.1|1288301_1289069_-|DUF4428-domain-containing-protein
MGLFGKKKADICCICNTEIGVLNIEDGWICNSCFKEYCDALSMTKAPKILRKLDIEKTISSTKKNNELQKIFNTTNNIENYIEFDEDNKKWLVSKKSINDKKTPIIHSYEDIVKFELLENGETVTKGGIGRALAGGILFGEAGAIVGGITGKKTTRKVVDTFKIKITINNIDNPIEYIELINKKTKTNSSAYEKAYKDAHKILSTLSAITQSIKETDNINTKSVADEILKYKNLLDMEAITQDEFNTKKKELLNL
>NZ_CP046327.1|WP_009893138.1|1285863_1288236_-|tape-measure-protein
MATIQTSIKIFDGMTPAFRNMTTSINTTINSLERLQQRLHNPLNTGGIQASQQSLNNIENILTRIEQKIGRNTNEQENFNNKIKQGSEAGSLLVSKLKSLAGIYIGIRGIESITKAADTIASTKARLNLMNDGLQTTEQLNKMIYLSAQSARASYADTAAQVAKLGILAGDAFGSSAEVIKFTELMNKAFVIGGTSANEASAAMYQLTQAMGAGKLQGDEFRSIMENAPLLATKIADAMGKTKDQLKELSSSGAITADVIRNALFKASDEIEKKFASMPVTFSQALTMMKNDAYMIFGQTLGKISGALQSVRFSEIVVSIRNVMIAISSNIYDTLNIIKNILNSEFFSNLVQGFTFCAVVITKSLGSIVNTALNIVNIFAQNWSIIKPIVFGVASVFILFRGVLLATKIATIGNVIANVAHAASSSLSALMTNIQAAALMRSNGATLSATIATWGLNAALLACPITWVVLGILAFVVVVFVAVAAVNKFAGTSLTALGVIVGAVFAAVAAIQNVMIWLLNGCIAVNEGITNGWNQCVYLMKQAIAKGVIFIIEKMASLNNSVNNAGNALGKAFIDGANIAIRGVNKLIDLINKIPGINIGKVGEATFTPVKADNSYIKQQIDSLNRWVGDAPEKVKLERMGYKDIGAAFQKGNALGTKWQNAITDKFKDTFDINKMLEDAKKKLGLDDLWNKQNPLNNLGGFGGDLGKNVKDTAGNTAKMAKTMDKSQEDLKYLRDIAEQETINRFTGVNIKIDMNNTNNISKDTDVDGIVNVLTEKLNDAMVVSAEGIV
>NZ_CP046327.1|WP_009888849.1|1285157_1285847_-|LysM-peptidoglycan-binding-domain-containing-protein
MAYDFYLDGVQLPIAPPKLEVKVTNKNKTVDLINTGEVNILKKEGLSEISFEAEFTHNKLPFCRGQFRDVQFFLSKLELLKTDCKPFQFIVSRELGNKVLFNTNIKVSLEEYAISEDADNGSDTKVAIKLKQYRDYSTKKLVLAPPKNETGRPNVKIEPKRVDSVNATNTKTYTVKAGDSLWSICQKQLGNGSLYKKVYELNKSMMDKANKGKNLSKYTIYKGQVLKLG
>NZ_CP046327.1|WP_009893140.1|1283272_1285165_-|cell-wall-hydrolase
MVDELVLANDRDVRLVIAHWEDFYEPAVIDGITWEIERRGTPSKLEFTIVMDDILEFCEGNSVRLYYKGIGIFYGYIFQKKRDKENHIKIVAYDQLRYFKNKDTYVYSNKTASELVKILAKDFNLKYNVIEDTKYKISRVEENKTLFDMILTALDDTLREKKEMYTLYDDFGRITLKNVASMKLDTVMNNDVIEDFDYNSSIDSDTYTKIKLVRDNEESGKRDVYIAQDSAHMRSWGILQMFDTVDKNMSEAEIKQKCDILLKLYNKKTKSLSLKNALGDIRVRAGCLVPVFLNLGDIELQNYMLVEKVKHTFENNSHFMDLTLVDGDEFASYSSSSYSSGNTNNKDEKKNGPAQSIMKKNTGKKVPAIFTAYYPGNNAMEGGKTDCNGKPLDVKSRTVAGPMNREGVKKTWYTDDFLNKHPVFEYGDKVKIILPGTAYDNKVYTVKDNGGRIYVETNGTYHIDILLANASECKKFGRKNGYIIIGGDEEQTYQVEGNNQSNTNNNSKEDKLISIAKSKLGCNYVYGAEGPNNFDCSGFTQWCYKQIGIKIPRTASAQSKAGKAVDLKDRSKWKAGDLLCRIGGGSSNHVVMYIGNNQIIHSPQTGDVVKIESVNSYRKGKAYTHVRRFI
>NZ_CP046327.1|WP_009893142.1|1282998_1283259_-|DUF2577-domain-containing-protein
MSQDLLQIIKKAAMDAVETSNPMRVVFGTIESISPLRVKIEQKLSIGEIFLIQTDTFKRYTDKKMGDKLVLIRMQGGQQYLILDRM
>NZ_CP046327.1|WP_009888851.1|1282574_1282994_-|DUF2634-domain-containing-protein
MLPSDNLDYDIEDVSIINFDVRQEPSKTFKLHIEKSKIDGICDDVEALKQTIFLILNTERYEHLIYSRNYGVELNDLIGEPISYVIPELERRITEALIQDDRIENIDNFEFQNIKGKVQCRFSVHTKYGNIKAEKVVSV
>NZ_CP046327.1|WP_003429855.1|1293108_1293270_-|hypothetical-protein
MNNFLLNVIAGVIASLIFCLICKVFLKVKSHSTRGKSKSGWEFDFKIKFHKFK
>NZ_CP046327.1|WP_011861033.1|1293416_1293611_-|hypothetical-protein
MRGGDFDASITHYCIQKLKWKPSEYMNLEVNERALAAASILIKIEDEEEAMKEAERERKRGRRR
>NZ_CP046327.1|WP_003429853.1|1293610_1294051_-|phage-portal-protein
MSNLSAFLSQNAIKVDNVKYVASNRFLDKEGKPVEWELKVLSSEEDEALRRKCTKRVKVIGNNGKHTGQYTSEIDYNSYVAELCVASTVFPDLKDAELQNSYGVMGEAQLLKTMLTAGEYVNYTVKVNEVNGFDTSFEDKVEEAKN
>NZ_CP046327.1|WP_009888843.1|1294122_1294950_-|hypothetical-protein
MEFESGIKLGKLTLIKYLGRNKHSKKVWLCQCECGNKVERVENNLKQSIKNEKPPHCGCSPNWKGQNKRFKDITGKTFGKLTVLKMSGKDKYSHNLWLCQCECGNRTITSTSALEQGKAQSCGCIRKEILLERSTTHNKSNDSLYRVYHRMIKRCTNKSNKDYNYYGGRGIEVCNEWLEDFINFYNWSIENGYRKGLTIDRINVNGNYEPSNCRWVTWEVQRNNKRNSIRVNYKGEMITLKQCAENLNVKYLFLYNQLVTKKIPLEEVIKNIGME
>NZ_CP046327.1|WP_009888842.1|1295008_1295479_-|phage-tail-tube-protein
MAQTINAKDTVSAKKAECFITIEGKRYNFMQAIDLEAKMEKNKSEVPILGRTTKGNKTTGSTNTGSATFHYNTSIFRELLYRYKETGEDIYFDIQVTNEDPTSAVGRQTVVLKDCNMDSGIITKFDADGEYLDEDMDFTFEDWELVESFALLNGML
>NZ_CP046327.1|WP_009893136.1|1295495_1296806_-|hypothetical-protein
MALGGGTFVTQNKILPGAYINFISAKRATSSLSDRGIVAMPLELDWGIDEEAFQVTSDDFEKYSVKYFGYDYTHEKLKGLRDLFKNIRLGYFYKLNKGVKASCTIATAKYSGIRGNDLKVTVTTNIDDNAKFDVVILLDNKKVDTQIAKVITDLQDNDYITWKKDATLEASAGLVFTGGTNGEAVTGAEYQAFLDKIESYSFNALGCLATTTEIKSLFVEFTKRMRDKVGAKFQTVLYKKSDADYEGVVSIENKIKDKDLVESSLIYWATGAIAGCDINKSNTNKKYDGEFDVDVNYTQIQLEEALKTGKFIFHKVGDEVHVLEDINTFVSFTDDKNDDFSSNQSVRVLDQIANDIATLFNEKYLGKVPNDKAGRISFWNDVVKHHKELENIRAIEDFKTDDVSVELGNDKKTVIVSDAIKVINAMSKLYMTVSVN
>NZ_CP046327.1|WP_009888840.1|1296806_1296983_-|hypothetical-protein
MSKALSKEDNYKFTKEQIVNSKKYVNRKDLLNAILKENELYSFSEVEDRINKFMKGVS
>NZ_CP046327.1|WP_009888839.1|1296975_1297413_-|hypothetical-protein
MLNNIIDGISVKLDKSFGEKYTIYSEDVEQGINEPCFFIVPLNPSKTPYPSGRELKKNSFDVHYFPRSEDKNFEINEIAEMLLEELEYIEIDGDLVRGTNMNFEIIDNVLHFFVDYNYFTIKNNDTNKMDTVELFGGLKRGDNFE
>NZ_CP046327.1|WP_009888838.1|1297761_1298568_-|hypothetical-protein
MAKFLDITGKKFGRLRVIKFSKEIKSGKRNRKYWLCKCDCGNFKEIRTDSLTSGLVQSCGCLKKEQDKLNLTDKYQFKKKYKVQNKRLYSIWKGIISRCTDKNNKRYNRYGERNIIVCDEWFCYDNFANWALSNGYSEKLTIDRINNEGNYESSNCRWVDIKTQCRNRSTNILVKHEEKEITLIELSEKTGISYSCLRSRYSKGLVGNKLIEKVKIIEESRAKLSIEDVKEIRKKYSDGYTIKQLSEIYPVTYSSISNIVHRRTWKNI
>NZ_CP046327.1|WP_009893135.1|1298677_1298968_-|HK97-gp10-family-phage-protein
MARWGSVDFREFKRVCKKMEKFTKIDLDKFCKDAARELAARLLGKVIRRTPVDTGFLREGWSGVAYARSLPVYKQGNNYIIEVVNPTEYALTQWGI

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Crispr_ID: NZ_CP046327_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046327_6

1384751-1385044

Orphan

I-A

Consensus_repeat	Method
ATTTACATTCCATATAGTTAATATAAAAC	CRISPRCasFinder
ATTTACATTCCATATAGTTAATATAAAAC	CRT
GTTTTATATTAACTATATGGAATGTAAAT	PILER-CR

4 spacers

The CRISPR arrays of NZ_CP046327_6

>merge|NZ_CP046327|6|1384751-1385044|CRISPRCasFinder,CRT,PILER-CR
ATTTATATTCCGTATAGTTAGTATAAAACGTAAGTAATATAAATTTATGTAAAACAACAAAAGATGGATTTACATTCCATATAGTTAATATAAAACGTTTTAATGAATTAACAGAAGATGAAAGTTTTATATGTATTTACATTCCATATAGTTAATATAAAACCATTGAAAATAGTGACTTTTACGAAAAATTTGCTAAAATTTACATTCCATATAGTTAATATAAAACACTTCCTATTAAATCCACATTAGGAAATTCTCCGAGATTTACATTCCATATAGTTAATATAAAAC

>NZ_CP046327|6|6|1384751-1385044|CRISPRCasFinder
ATTTATATTCCGTATAGTTAGTATAAAAC	GTAAGTAATATAAATTTATGTAAAACAACAAAAGATGG
ATTTACATTCCATATAGTTAATATAAAAC	GTTTTAATGAATTAACAGAAGATGAAAGTTTTATATGT
ATTTACATTCCATATAGTTAATATAAAAC	CATTGAAAATAGTGACTTTTACGAAAAATTTGCTAAA
ATTTACATTCCATATAGTTAATATAAAAC	ACTTCCTATTAAATCCACATTAGGAAATTCTCCGAG
ATTTACATTCCATATAGTTAATATAAAAC

>NZ_CP046327|6|5|1384751-1385044|CRT
ATTTATATTCCGTATAGTTAGTATAAAAC	GTAAGTAATATAAATTTATGTAAAACAACAAAAGATGG
ATTTACATTCCATATAGTTAATATAAAAC	GTTTTAATGAATTAACAGAAGATGAAAGTTTTATATGT
ATTTACATTCCATATAGTTAATATAAAAC	CATTGAAAATAGTGACTTTTACGAAAAATTTGCTAAA
ATTTACATTCCATATAGTTAATATAAAAC	ACTTCCTATTAAATCCACATTAGGAAATTCTCCGAG
ATTTACATTCCATATAGTTAATATAAAAC

>NZ_CP046327|6|5|1384818-1385044|PILER-CR
ATTTACATTCCATATAGTTAATATAAAAC	GTTTTAATGAATTAACAGAAGATGAAAGTTTTATATGT
ATTTACATTCCATATAGTTAATATAAAAC	CATTGAAAATAGTGACTTTTACGAAAAATTTGCTAAA
ATTTACATTCCATATAGTTAATATAAAAC	ACTTCCTATTAAATCCACATTAGGAAATTCTCCGAG
ATTTACATTCCATATAGTTAATATAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046327.1\|WP_009889364.1\|1377175_1378384_-\|tyrosine--tRNA-ligase	unknown	unknown	gnl\|CDD\|237360
NZ_CP046327.1\|WP_009889352.1\|1389348_1390176_+\|3-methyl-2-oxobutanoate-hydroxymethyltransferase	unknown	unknown	gnl\|CDD\|234723
NZ_CP046327.1\|WP_009889371.1\|1374135_1374681_-\|NADH-peroxidase	unknown	unknown	gnl\|CDD\|153105
NZ_CP046327.1\|WP_009889366.1\|1376233_1377115_+\|polysaccharide-deacetylase	unknown	unknown	gnl\|CDD\|200569
NZ_CP046327.1\|WP_009889368.1\|1374903_1375818_-\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|223769
NZ_CP046327.1\|WP_009893094.1\|1392467_1393382_+\|DUF2935-domain-containing-protein	unknown	unknown	gnl\|CDD\|378573
NZ_CP046327.1\|WP_003439365.1\|1391453_1391636_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046327.1\|WP_009889349.1\|1393771_1394419_+\|lactate-utilization-protein	unknown	unknown	gnl\|CDD\|376839
NZ_CP046327.1\|WP_009893093.1\|1394585_1395155_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046327.1\|WP_009889353.1\|1385704_1387798_-\|GGDEF-and-EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|238923
NZ_CP046327.1\|WP_003439379.1\|1381020_1383141_+\|ferrous-iron-transport-protein-B	unknown	unknown	gnl\|CDD\|223447
NZ_CP046327.1\|WP_009889360.1\|1380000_1380441_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|225064
NZ_CP046327.1\|WP_079254691.1\|1388450_1389374_+\|DUF2520-domain-containing-protein	unknown	unknown	gnl\|CDD\|378484
NZ_CP046327.1\|WP_009889351.1\|1390194_1391043_+\|pantoate--beta-alanine-ligase	unknown	unknown	gnl\|CDD\|234741
NZ_CP046327.1\|WP_009893097.1\|1383273_1384092_-\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133409
NZ_CP046327.1\|WP_009896473.1\|1384310_1384583_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046327.1\|WP_003420037.1\|1380767_1380995_+\|ferrous-iron-transport-protein-A	unknown	unknown	gnl\|CDD\|377199
NZ_CP046327.1\|WP_009889362.1\|1378859_1379828_-\|DUF2232-domain-containing-protein	unknown	unknown	unknown
NZ_CP046327.1\|WP_009893092.1\|1395159_1396059_-\|4Fe-4S-binding-protein	unknown	unknown	gnl\|CDD\|274004
NZ_CP046327.1\|WP_009889347.1\|1396069_1396219_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP046327.1\|WP_009889364.1\|1377175_1378384_-\|tyrosine--tRNA-ligase	gnl\|CDD\|237360	PRK13354, PRK13354, tyrosyl-tRNA synthetase; Provisional.	0
NZ_CP046327.1\|WP_009893094.1\|1392467_1393382_+\|DUF2935-domain-containing-protein	gnl\|CDD\|378573	pfam11155, DUF2935, Domain of unknown function (DUF2935). This family of proteins with unknown function appears to be restricted to Firmicutes. The structure of this protein has been solved and each domain is composed of four alpha helices. A metal cluster composed of iron and magnesium lies between the two domains.	2.48442e-33
NZ_CP046327.1\|WP_009889371.1\|1374135_1374681_-\|NADH-peroxidase	gnl\|CDD\|153105	cd01046, Rubrerythrin_like, rubrerythrin-like, diiron-binding domain. Rubrerythrin-like domain, similar to rubrerythrin, a nonheme iron binding domain found in many air-sensitive bacteria and archaea, and member of a broad superfamily of ferritin-like diiron-carboxylate proteins. Rubrerythrin is thought to reduce hydrogen peroxide as part of an oxidative stress protection system. The rubrerythrin protein has two domains, a binuclear metal center located within a four-helix bundle of the rubrerythrin domain, and a rubredoxin domain. The Rubrerythrin-like domains in this CD are singular domains (no C-terminus rubredoxin domain) and are phylogenetically distinct from rubrerythrin domains of rubrerythrin-rubredoxin proteins.	1.43332e-53
NZ_CP046327.1\|WP_009889366.1\|1376233_1377115_+\|polysaccharide-deacetylase	gnl\|CDD\|200569	cd10944, CE4_SmPgdA_like, Catalytic NodB homology domain of Streptococcus mutans polysaccharide deacetylase PgdA, Bacillus subtilis YheN, and similar proteins. This family is represented by a putative polysaccharide deacetylase PgdA from the oral pathogen Streptococcus mutans (SmPgdA) and Bacillus subtilis YheN (BsYheN), which are members of the carbohydrate esterase 4 (CE4) superfamily. SmPgdA is an extracellular metal-dependent polysaccharide deacetylase with a typical CE4 fold, with metal bound to a His-His-Asp triad. It possesses de-N-acetylase activity toward a hexamer of chitooligosaccharide N-acetylglucosamine, but not shorter chitooligosaccharides or a synthetic peptidoglycan tetrasaccharide. SmPgdA plays a role in tuning cell surface properties and in interactions with (salivary) agglutinin, an essential component of the innate immune system, most likely through deacetylation of an as-yet-unidentified polysaccharide. SmPgdA shows significant homology to the catalytic domains of peptidoglycan deacetylases from Streptococcus pneumoniae (SpPgdA) and Listeria monocytogenes (LmPgdA), both of which are involved in the bacterial defense mechanism against human mucosal lysozyme. The Bacillus subtilis genome contains six polysaccharide deacetylase gene homologs: pdaA, pdaB (previously known as ybaN), yheN, yjeA, yxkH and ylxY. The biological function of BsYheN is still unknown. This family also includes many uncharacterized polysaccharide deacetylases mainly found in bacteria.	2.44261e-75
NZ_CP046327.1\|WP_009889368.1\|1374903_1375818_-\|DMT-family-transporter	gnl\|CDD\|223769	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only].	5.07348e-11
NZ_CP046327.1\|WP_009893097.1\|1383273_1384092_-\|MerR-family-transcriptional-regulator	gnl\|CDD\|133409	cd04782, HTH_BltR, Helix-Turn-Helix DNA binding domain of the BltR transcription regulator. Helix-turn-helix (HTH) multidrug-efflux transporter transcription regulator, BltR (BmrR-like transporter) of Bacillus subtilis, and related proteins; N-terminal domain. Blt, like Bmr, is a membrane protein which causes the efflux of a variety of toxic substances and antibiotics. These regulators are comprised of two distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their conserved N-terminal domains contain predicted winged HTH motifs that mediate DNA binding, while the C-terminal domains are often unrelated and bind specific coactivator molecules. They share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the spacer between the -35 and -10 promoter elements.	3.3683e-41
NZ_CP046327.1\|WP_009889351.1\|1390194_1391043_+\|pantoate--beta-alanine-ligase	gnl\|CDD\|234741	PRK00380, panC, pantoate--beta-alanine ligase; Reviewed.	3.35749e-163
NZ_CP046327.1\|WP_009889349.1\|1393771_1394419_+\|lactate-utilization-protein	gnl\|CDD\|376839	pfam02589, LUD_dom, LUD domain. This entry represents a domain found in lactate utilization proteins B (LutB) and C (LutC), as well as several uncharacterized proteins. LutB and LutC are encoded by th conserved LutABC operon in bacteria. They are involved in lactate utilization and is implicated in the oxidative conversion of L-lactate into pyruvate.	1.36486e-54
NZ_CP046327.1\|WP_009889353.1\|1385704_1387798_-\|GGDEF-and-EAL-domain-containing-protein	gnl\|CDD\|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	1.15693e-88
NZ_CP046327.1\|WP_003439379.1\|1381020_1383141_+\|ferrous-iron-transport-protein-B	gnl\|CDD\|223447	COG0370, FeoB, Fe2+ transport system protein B [Inorganic ion transport and metabolism].	4.06427e-151
NZ_CP046327.1\|WP_003420037.1\|1380767_1380995_+\|ferrous-iron-transport-protein-A	gnl\|CDD\|377199	pfam04023, FeoA, FeoA domain. This family includes FeoA a small protein, probably involved in Fe2+ transport. This presumed short domain is also found at the C-terminus of a variety of metal dependent transcriptional regulators. This suggests that this domain may be metal-binding. In most cases this is likely to be either iron or manganese.	1.57039e-13
NZ_CP046327.1\|WP_079254691.1\|1388450_1389374_+\|DUF2520-domain-containing-protein	gnl\|CDD\|378484	pfam10728, DUF2520, Domain of unknown function (DUF2520). This presumed domain is found C-terminal to a Rossmann-like domain suggesting that these proteins are oxidoreductases.	7.81138e-41
NZ_CP046327.1\|WP_009889360.1\|1380000_1380441_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|225064	COG2153, ElaA, Predicted acyltransferase [General function prediction only].	2.32711e-35
NZ_CP046327.1\|WP_009889352.1\|1389348_1390176_+\|3-methyl-2-oxobutanoate-hydroxymethyltransferase	gnl\|CDD\|234723	PRK00311, panB, 3-methyl-2-oxobutanoate hydroxymethyltransferase; Reviewed.	4.61346e-170
NZ_CP046327.1\|WP_009893092.1\|1395159_1396059_-\|4Fe-4S-binding-protein	gnl\|CDD\|274004	TIGR02163, Ferredoxin-type_protein_NapH_homolog, ferredoxin-type protein, NapH/MauN family. Most members of this family are the NapH protein, found next to NapG,in operons that encode the periplasmic nitrate reductase. Some species with this reductase lack NapC but accomplish electron transfer to NapAB in some other manner, likely to involve NapH, NapG, and/or some other protein. A few members of this protein are designated MauN and are found in methylamine utilization operons in species that appear to lack a periplasmic nitrate reductase.	4.65503e-25

>NZ_CP046327.1|WP_009896473.1|1384310_1384583_+|hypothetical-protein
MKIVIGATIRYLIKHKVNYCNKKSLDKLELKYGNIDREKAVKLEIFYQYLIELEYIEMSLLIRRLDTAITSLALVSIITIASYYLIRKNV
>NZ_CP046327.1|WP_009893097.1|1383273_1384092_-|MerR-family-transcriptional-regulator
MEKQYFTTGEFAKLCGISKQTLIFYDKIGIFSPEYKDKNNYRYYSVYQYDTLDILQSLREIGMSLEEIKEYIQNRTPQLCVKMLKEEEKKIREKIKKLRKISSKMQNRINITVEGISKMNSEEIYISKKFEEYLVLSSDLSNMSNSDFMMELIDFTNYCKSKNLYQGYELGVIVSNENIKNGDYLSISSFYLKIDKKIKDKKLYVKPEGMYACIKHIGKYEDSYKSYEKLKKYIYENEYKIIGNSYEESILDFFCESNEDNYMTEISIQVSR
>NZ_CP046327.1|WP_003439379.1|1381020_1383141_+|ferrous-iron-transport-protein-B
MGLTHNSTKMSSLKDMFDIDNKEDQFVIALAGNPNTGKSTVFNHLTGLRQHTGNWPGKTVATARGNFKYKNTEYALIDLPGTYSLFALSQEEIVARDFICFGNPDAVIVVCDATCLERNLNLVFQVMELTDKVILCINLIDEARKKGITIDKKLLEDSLGIPVILTAARNGSGMDELLDTLNDVSFDKYKLNNKPVRYNENIENVVKSIQPELDNIIPGINSRWLGLRLIDGDESIFESMSNYIDKDSIDAINEVKKKIPDNINKQKIRDEFTKINYDYAKKLSDECCSNVAKKSTDREEKVDKILTSKIFGLPIMLLLLGTILWITIEGANYPSTLLSNLLLGFEPSISGILNSINCPSWLNDMLVLGLYRTLAWVISVMLPPMAIFFPLFTLLEDFGYLPRVAFNLDHLFKKACAHGKQCLTMCMGFGCNAAGVIGCRIIDSPRERLIAILTNNFVPCNGRFPTLIAISTIFFSSVITNSFVSSVATALCITLLIILGVIITLLVSYTLSKTLLKGVPSTFTLELPPYRVPQIGRTLYTSIIDRTIFVLGRAVMVAIPAGVITWIFANIYIGDLSILSHVANFLDPLAKLIGLDGFILLAFILGFPANEIVVPILLMAYLATGSMIELDSFSALGQVLREHGWTYLTALNVMLFSLLHWPCATTLLTIKKETGSLKWTALGFLMPTILAFVVCFLTTTVYNLFI
>NZ_CP046327.1|WP_003420037.1|1380767_1380995_+|ferrous-iron-transport-protein-A
MKNLNDIQVKKTVKVEDILSSGNLRERMLALGLTRGAVIDVVRKGPKNNLTVYKIRGSKIALRQEESSLILVSDI
>NZ_CP046327.1|WP_009889360.1|1380000_1380441_+|GNAT-family-N-acetyltransferase
MFKIKHFNDLSLDEFYEIAKSRYEVFACEQKIFSLNDYDDIDKSSYHIFLKENGLICAYARIIPKEYSSYNDVSIGRVLVLSSHRRKGLAKQMMDCAIDFIKINLHENNITLSAQTYIKNLYLSCGFKEISEVYDEAGIEHIKMRL
>NZ_CP046327.1|WP_009889362.1|1378859_1379828_-|DUF2232-domain-containing-protein
MNTTKKLTEAALLSSLFIVVTIIAVSTGFGYAIYLDFIVPVFFCIICLKCDLKYTILSGITSLLIISLVLGNLGTAIWASQSVLLGIMCGYLINKPTMVMDDLVYGSVFGVIVMVFIDIYASTLIGYSFMKEFQGYSKWIYFNGYTNFIYYLMIALFPFGMVFCIYLLSLILGNKLHILDSNSLKKFLIFKNFRSLNQFLCCSKKAFYICVSYLAIFEVLKLLNVKVDSVYLKTIFISITYISVYFIIRDSCMSLQNFIIAKFRKLLYARILFLIIILLLFFIFDVTVISLIIINAFLNKKINIRLSQSNIVNKQINLLIEK
>NZ_CP046327.1|WP_009889364.1|1377175_1378384_-|tyrosine--tRNA-ligase
MKSIDEQMRIIMKGVDDLIDEKELREKLIKSEKEGKPMIVKLGLDPSAPDIHLGHTVVLRKMKQLQDLGHQIVIIIGDFTGKIGDPTGKSKARKALTTEQVLANAKTYEEQIFKVLDKEKTIVRFNSEWLAKLNFEDVIKLAATITVARMLEREDFKKRYEGQMPISVHEFFYPLMQAYDSIALEADIELGGTDQRFNLLMGRSLQREFGMESQIVIMMPLIEGLDGKEKMSKSLGNYIGIDEEAGIMYQKSMEIPDELIIKYYNLVTDVHPDEVNKIESQLKEGSVNPRDIKMNLAREIVTLYHGEESAKEAEERFKSVFQKGQIPEDIQTIQVKEDGFDLIEVLVSNEIVKSKSEVRRLASQGGVKVNGEKVEDLSTIVKESELVVQIGKKKFVKIELVK
>NZ_CP046327.1|WP_009889366.1|1376233_1377115_+|polysaccharide-deacetylase
MVKKRKKKTVTLTILVVIVIGIFSMAWADMSRKKEMKETQERLKAERLEKERIEKEKNEPIIGAKKEAVKEYGYDAKIVWDKLNKYDYSNNGEKIVFLTFDDGPSTTNTPQVLDILKRHGVRGTFFIKGDSLERKGANEILKRTFDEGNAIAHHSYTHDYKKLYPGRSLNLDTFVNELNKTDEAMKKVLGKNFSSNVVRCPGGYMSWKNMEPLGNYLKEKNMASIDWNALNADAEGKKKNAQELFEHAKKSSEGKEMVVLLMHDTYGKQETVNALDQIITYFKDNGYQFKILI
>NZ_CP046327.1|WP_009889368.1|1374903_1375818_-|DMT-family-transporter
MKKYFGEIGLIFIAIIWGSGFVATQFALDGGLTPLQIITLRFFLAAIIMNLLFFKQIRANMGKKLLKAGGILGIFLFLAFTVQTIGLMYTTPSKNAFITAANVVIVPFIGFILYRRKLDKIGIISSLVALIGIGILSLEADFSINFGDFLTLICSFGFAFHIFFTSEFAKDNNPMALTAIQFTVAFLMSVVVQTFAGQLKMEAELSGYMGTMYLAVFSTTIGFLFQTICQKRVDGTRTAIILSTEAVFGTIFSIIILKELITAKLIIGSILIFVAIITAETKLSFLKSKKVKLKDSEESSLESI
>NZ_CP046327.1|WP_009889371.1|1374135_1374681_-|NADH-peroxidase
MKKFVCTVCGYIHEGDAAPAQCPVCKVGADKFEEMKGEMVWADEHRIGVAQGVDAEIIEGLRANFTGECTEVGMYLAMSRQADREGYPEVAEAYKRIAFEEAEHAAKFAELLGEVVVADTKENLRVRVDAEYGATDGKLKLAKRAKELGLDAIHDTVHEMCKDEARHGKAFLGLLNRHFGK
>NZ_CP046327.1|WP_009889353.1|1385704_1387798_-|GGDEF-and-EAL-domain-containing-protein
MNKRNFEVILNQLQINIYVTNIHTNEIIFMNKKMKEEYNILDPEGKVCWQVLYPEQNSTCSFCKVLELLKNDKKGVLIKWYEKCNKLNRVFENYDSLITWQDGTVVHMHQSIDIANSTILNKPIKINEFNEISNTKEGKGVFNFSRDNFDYNSTLLYDALIRGTDEYIYICNMKTGVFRYSPSQVELFDLPGEIVENPLIYWKKIVHPEDWNRFYKSNTEIGKNQMDYHTVEFRAKNRSGEYIWLRCRGQLMRDEFGEPSIFAGIMTQLGKQNKIDSLTQLLNYHEFMSVFEDKISNPMIEKLCIVLLNIDDFKNVNEMYDRDFGDNIIKTLAQSIQSILPDNAELYKLDGDEMGILVDNVEENEILTLYNQIQNMIIHLQLWRKYGLNITISAGCVIYPKHGDTVKELYKCASYSLQYAKEHGKNRLVFFSQEILKNKMYSLEMMRDLKASINDDFRGFSLRFQPQVDTQSHKIIGVEVLLRWTNDKCKAISPLEFIPILEENDMINIVGAWVLRMALRTFRKWIDYYPFFKVSVNVSAVQILEDTFIEDIVKIIDDENFPYQNLVLELTESHTVQNMSILQFKFKALQDLGIYIAMDDFGTGYSSLEVLKFSPIDIVKIDRVFVKDILKSKFDATFIHFIVAICHDVGIKVCLEGVETQEEYDLVKQIKPDYIQGYLFGKPQTATEIFDLLKLDN
>NZ_CP046327.1|WP_079254691.1|1388450_1389374_+|DUF2520-domain-containing-protein
MGSGKVGTSLANYFLSKGYCVSGFYGRNQLSLLESINLTKTKIYSNLRDIIYENDILFITTSDDSIEIIDKKLSKFNLKHKYICHTSGSLKSSILFCSKKAGALIYSIHPIFAFSNKNTNIKKMKDICFSIEGDNEQDDLVIQNFIDGLGNQFFIRDKDTSSTYHLANVLVSNLVLSLLDIGVSYFIKLGLSEEESLKAISPLVKKNIENILDNGFTKALTGPVSRGDITPIRKHLSVLNKKDEDIYKILSLNLLKIIALGNDNSLKGTKNITIENAIENLISKSEKYKEIYKLLGGKNDEKYHTDF
>NZ_CP046327.1|WP_009889352.1|1389348_1390176_+|3-methyl-2-oxobutanoate-hydroxymethyltransferase
MKNTIQTFKNAKYEGKKLSMLTAYDYSIAKIMDECDINGILIGDSLGMVIKGEENTLSVTIDEIIYHTKAVKNGAKNALIVSDMPFLSYHVSIEDAVKNAGRLIKEGGAHAVKLEGGSNVIKQIESIVNAQIPVMGHLGLTPQSVNSFGGFKVQGNTSETARQLIEDAKLIEKAGAFSIVLEGVPTKIADMVTNSISIPTIGIGAGINCDGQILVYQDMLGVFGDFVPKFVKQYANIGDIMKDSIKNYILEVNTGAFPQEKHSFSINESELEKLY
>NZ_CP046327.1|WP_009889351.1|1390194_1391043_+|pantoate--beta-alanine-ligase
MLVKEIKLLRNIIKDWRKHGYSIGLVTTMGFLHEGHQSLIKKAVKENDKVVVSVFVNPTQFGPNEDFNSYPRDIDKDFKYCMDSGATVVFNPSPEEMYLKGNCTTINVSGLTDFLCGAKRPVHFGGVCLVVSKFLNIVTPDKAYFGEKDAQQLAVIKRMVKDLNINTEIIGCPIIRENDGLAKSSRNTYLSEEERKSALILNKSLSLAKEELVKGNLNPKNIKELITAKINSEHLAKIDYVEIVDSETLQPVKQIEHSILVAIAVFIGKTRLIDNFTFELNI
>NZ_CP046327.1|WP_003439365.1|1391453_1391636_+|hypothetical-protein
MFKDKIDECVHIMTAYIASLKEYYSFIETQIGDFIKKYGEDVVELCLHRVMILLCECGLA
>NZ_CP046327.1|WP_009893094.1|1392467_1393382_+|DUF2935-domain-containing-protein
MIDNQKYVILSLELHLFFSRIMKEHALFLEAGFTNKNYNLAMEADHYKKQFEDLLSYTVSASNGIIRPDILYSEELVTTLTSVAEQKTEEFTGIEINKDITTRELNLQSGVNPQVGQDLVNYVAQLNSDAIRLLDGLINFKERVLDGVLSCTIFTSNYPLLLEHIIHEANLYRSYVVDLENKIDIESKNAKEIELFWDHIMMEHALFMRGLLDPSEGELINTSNDFAIKFNELIEKTNEMTDSNIKNITEETLNETVEFKDFKEAGASGIEQCKIKSIILPLLADHVLREANHYIRILESYKNM
>NZ_CP046327.1|WP_009889349.1|1393771_1394419_+|lactate-utilization-protein
MIRQTPLEKRYDKLGPHIVTAFKKRYFDAYYCKTRNEALQQILDLIPQNHVVSWGGSETLKEMGVQTAVREKGFKVIDRDLAKTPEERTEIMRQALLCDTFLMSSNAISEDGQLFNIDGNGNRVAAMIFGPKNVIVVAGMNKIVKNIDDAIQRTRTIASPAVVQRFQDVNTPCYINGSCIDCTSPESICAYMVTTRISRPAKKIKVILVGENLGL
>NZ_CP046327.1|WP_009893093.1|1394585_1395155_-|hypothetical-protein
MKKFILCIIMFAISVLVLAGCTNDNKIKNEVDSMFNSIKTQDADTVDKYFPKSGLGNLIYEDKEGFKMYSKNMTWEISDIKNNKDKVTVDLKINNTDMVSILKKNPPKLGEMMPNPTMKDIDSAKKKEFNITLELVKSGDNYVCKVNQESAMKLLNVITGGGIDYLADYNKDYYKQLDEEQKNYENKNS
>NZ_CP046327.1|WP_009893092.1|1395159_1396059_-|4Fe-4S-binding-protein
MKLLSKVNNNIRLIIQVAFTALTNGYVNGFLEGTIYGGESKKLCVPGLNCYSCPGALGACPIGSLQAVLSSREYKFSFYVVGFLMAFGAFFGRFVCGWLCPFGLVQDLLHKVPFPVKIKKVYGDKYLKYLKYIVLIMFVIILPVAIVNVAGGGNPWFCKWICPSGTLLGGIPLILGNENLRESIGFLFSWKLSILLLILLMSIITYRPFCKYICPLGAIYGFFNPISIYRFKIDKDKCTNCTACQTKCKLDIPIYKDVNSPDCIRCGECIKVCPQNAITTTFSKDKKENNICAKKYRGI
>NZ_CP046327.1|WP_009889347.1|1396069_1396219_-|hypothetical-protein
MSNFIKDNKKGISIIAISIIFIALGTYRGETNTVLTKAIMICLECIGIG

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Crispr_ID: NZ_CP046327_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046327_7

1495663-1496415

Orphan

I-A

Consensus_repeat	Method
ATTTACATACCACTTAGTTAATATAAAAC	CRISPRCasFinder
ATTTACATACCACTTAGTTAATATAAAAC	CRT
GTTTTATATTAACTAAGTGGTATGTAAAT	PILER-CR

11 spacers

The CRISPR arrays of NZ_CP046327_7

>merge|NZ_CP046327|7|1495663-1496415|CRISPRCasFinder,CRT,PILER-CR
TATTCTATACATTTTAGTTAATGTAAAATTTCTTGATTGTACTCTCTAACTTTTCAACATTATACTATTTACATACCACTTAGTTAATATAAAACCAAAAGTTGGAGAAATAGAAGTGCCATTCACATTCGAATTTACATACCACTTAGTTAATATAAAACACTTTAATAATTCTACCTTTACTAGTGCTAAAGTAATTTACATACCACTTAGTTAATATAAAACCAGGAACATATGGCAAACTATAAGGAAAACCTGCAAATTTACATACCACTTAGTTAATATAAAACCCTCTGTGACTCCATATTTTTTCATAATATATAATTCATTTACATACCACTTAGTTAATATAAAACATAGAAGTTGTTGCATATAACTACATTGACAAGTTATTATTTACATACCACTTAGTTAATATAAAACTTTTCTACTTTTTTAATCATTTAATCACCTGCTTAAAAATTTACATACCACTTAGTTAATATAAAACTTTTGATATTCTAAAGAAGTGACAATGATGTGACACAAATTTACATACCACTTAGTTAATATAAAACTATTATGTAGTCATATATTTCAAACTCTAATTTCGTATTTACATACCACTTAGTTAATATAAAACCCATTTGACCCATGCATATTGACTTCCACCTTCCTTATTTACATACCACTTAGTTAATATAAAACTTTACAATATAGACGTACATATACTTCTGAAAAACCTCTTTCCATACCACTTAGTTAATATAAAAC

>NZ_CP046327|7|7|1495663-1496415|CRISPRCasFinder
TATTCTATACATTTTAGTTAATGTAAAAT	TTCTTGATTGTACTCTCTAACTTTTCAACATTATACT
ATTTACATACCACTTAGTTAATATAAAAC	CAAAAGTTGGAGAAATAGAAGTGCCATTCACATTCGA
ATTTACATACCACTTAGTTAATATAAAAC	ACTTTAATAATTCTACCTTTACTAGTGCTAAAGTA
ATTTACATACCACTTAGTTAATATAAAAC	CAGGAACATATGGCAAACTATAAGGAAAACCTGCAA
ATTTACATACCACTTAGTTAATATAAAAC	CCTCTGTGACTCCATATTTTTTCATAATATATAATTC
ATTTACATACCACTTAGTTAATATAAAAC	ATAGAAGTTGTTGCATATAACTACATTGACAAGTTATT
ATTTACATACCACTTAGTTAATATAAAAC	TTTTCTACTTTTTTAATCATTTAATCACCTGCTTAAAA
ATTTACATACCACTTAGTTAATATAAAAC	TTTTGATATTCTAAAGAAGTGACAATGATGTGACACAA
ATTTACATACCACTTAGTTAATATAAAAC	TATTATGTAGTCATATATTTCAAACTCTAATTTCGT
ATTTACATACCACTTAGTTAATATAAAAC	CCATTTGACCCATGCATATTGACTTCCACCTTCCTT
ATTTACATACCACTTAGTTAATATAAAAC	TTTACAATATAGACGTACATATACTTCTGAAAAACCT
CTTTCCATACCACTTAGTTAATATAAAAC

>NZ_CP046327|7|6|1495663-1496415|CRT
TATTCTATACATTTTAGTTAATGTAAAAT	TTCTTGATTGTACTCTCTAACTTTTCAACATTATACT
ATTTACATACCACTTAGTTAATATAAAAC	CAAAAGTTGGAGAAATAGAAGTGCCATTCACATTCGA
ATTTACATACCACTTAGTTAATATAAAAC	ACTTTAATAATTCTACCTTTACTAGTGCTAAAGTA
ATTTACATACCACTTAGTTAATATAAAAC	CAGGAACATATGGCAAACTATAAGGAAAACCTGCAA
ATTTACATACCACTTAGTTAATATAAAAC	CCTCTGTGACTCCATATTTTTTCATAATATATAATTC
ATTTACATACCACTTAGTTAATATAAAAC	ATAGAAGTTGTTGCATATAACTACATTGACAAGTTATT
ATTTACATACCACTTAGTTAATATAAAAC	TTTTCTACTTTTTTAATCATTTAATCACCTGCTTAAAA
ATTTACATACCACTTAGTTAATATAAAAC	TTTTGATATTCTAAAGAAGTGACAATGATGTGACACAA
ATTTACATACCACTTAGTTAATATAAAAC	TATTATGTAGTCATATATTTCAAACTCTAATTTCGT
ATTTACATACCACTTAGTTAATATAAAAC	CCATTTGACCCATGCATATTGACTTCCACCTTCCTT
ATTTACATACCACTTAGTTAATATAAAAC	TTTACAATATAGACGTACATATACTTCTGAAAAACCT
CTTTCCATACCACTTAGTTAATATAAAAC

>NZ_CP046327|7|6|1495729-1496415|PILER-CR
ATTTACATACCACTTAGTTAATATAAAAC	CAAAAGTTGGAGAAATAGAAGTGCCATTCACATTCGA
ATTTACATACCACTTAGTTAATATAAAAC	ACTTTAATAATTCTACCTTTACTAGTGCTAAAGTA
ATTTACATACCACTTAGTTAATATAAAAC	CAGGAACATATGGCAAACTATAAGGAAAACCTGCAA
ATTTACATACCACTTAGTTAATATAAAAC	CCTCTGTGACTCCATATTTTTTCATAATATATAATTC
ATTTACATACCACTTAGTTAATATAAAAC	ATAGAAGTTGTTGCATATAACTACATTGACAAGTTATT
ATTTACATACCACTTAGTTAATATAAAAC	TTTTCTACTTTTTTAATCATTTAATCACCTGCTTAAAA
ATTTACATACCACTTAGTTAATATAAAAC	TTTTGATATTCTAAAGAAGTGACAATGATGTGACACAA
ATTTACATACCACTTAGTTAATATAAAAC	TATTATGTAGTCATATATTTCAAACTCTAATTTCGT
ATTTACATACCACTTAGTTAATATAAAAC	CCATTTGACCCATGCATATTGACTTCCACCTTCCTT
ATTTACATACCACTTAGTTAATATAAAAC	TTTACAATATAGACGTACATATACTTCTGAAAAACCT
CTTTCCATACCACTTAGTTAATATAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046327.1\|WP_003438534.1\|1506672_1507452_-\|Cof-type-HAD-IIB-family-hydrolase	unknown	unknown	gnl\|CDD\|369792
NZ_CP046327.1\|WP_009889225.1\|1485973_1486528_+\|cysteine-hydrolase	unknown	unknown	gnl\|CDD\|238496
NZ_CP046327.1\|WP_003429371.1\|1488674_1489484_-\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133378
NZ_CP046327.1\|WP_003429379.1\|1485530_1485896_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224647
NZ_CP046327.1\|WP_003429381.1\|1485165_1485300_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046327.1\|WP_003429358.1\|1499905_1500574_-\|diphthine--ammonia-ligase	unknown	unknown	gnl\|CDD\|238952
NZ_CP046327.1\|WP_003429356.1\|1500640_1501069_-\|EamA-family-transporter	unknown	unknown	gnl\|CDD\|377396
NZ_CP046327.1\|WP_009893027.1\|1501888_1502824_+\|TIGR01212-family-radical-SAM-protein	unknown	unknown	gnl\|CDD\|224163
NZ_CP046327.1\|WP_009893046.1\|1490253_1492488_+\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|238923
NZ_CP046327.1\|WP_009889221.1\|1493603_1495337_+\|diguanylate-cyclase	unknown	unknown	gnl\|CDD\|143635
NZ_CP046327.1\|WP_003419819.1\|1505984_1506569_+\|zinc-dependent-phospholipase-C-family-protein	unknown	unknown	gnl\|CDD\|376406
NZ_CP046327.1\|WP_003429376.1\|1486747_1487422_+\|MgtC/SapB-family-protein	unknown	unknown	gnl\|CDD\|224204
NZ_CP046327.1\|WP_009889222.1\|1492518_1493364_+\|GGDEF-domain-containing-protein	unknown	unknown	gnl\|CDD\|143635
NZ_CP046327.1\|WP_009893043.1\|1498432_1499788_+\|MATE-family-efflux-transporter	unknown	unknown	gnl\|CDD\|240548
NZ_CP046327.1\|WP_014466364.1\|1501220_1501769_+\|membrane-protein	unknown	unknown	unknown
NZ_CP046327.1\|WP_003429374.1\|1487926_1488103_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046327.1\|WP_003438585.1\|1488290_1488530_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046327.1\|WP_079254690.1\|1496945_1497338_-\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP046327.1\|WP_009889208.1\|1503094_1504039_-\|EamA-family-transporter	unknown	unknown	gnl\|CDD\|273359
NZ_CP046327.1\|WP_009893025.1\|1504354_1505785_+\|PAS-domain-S-box-protein	unknown	unknown	gnl\|CDD\|226350

Protein	Function_ID	Function_description	E-value
NZ_CP046327.1\|WP_003438534.1\|1506672_1507452_-\|Cof-type-HAD-IIB-family-hydrolase	gnl\|CDD\|369792	pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase. This family contains haloacid dehalogenase-like hydrolase enzymes.	1.15163e-50
NZ_CP046327.1\|WP_003419819.1\|1505984_1506569_+\|zinc-dependent-phospholipase-C-family-protein	gnl\|CDD\|376406	pfam00882, Zn_dep_PLPC, Zinc dependent phospholipase C.	9.21275e-20
NZ_CP046327.1\|WP_003429371.1\|1488674_1489484_-\|MerR-family-transcriptional-regulator	gnl\|CDD\|133378	cd00592, HTH_MerR-like, Helix-Turn-Helix DNA binding domain of MerR-like transcription regulators. Helix-turn-helix (HTH) MerR-like transcription regulator, N-terminal domain. The MerR family transcription regulators have been shown to mediate responses to stress including exposure to heavy metals, drugs, or oxygen radicals in eubacterial and some archaeal species. They regulate transcription of multidrug/metal ion transporter genes and oxidative stress regulons by reconfiguring the spacer between the -35 and -10 promoter elements. A typical MerR regulator is comprised of two distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their N-terminal domains are homologous and contain a DNA-binding winged HTH motif, while the C-terminal domains are often dissimilar and bind specific coactivator molecules such as metal ions, drugs, and organic substrates.	4.54289e-25
NZ_CP046327.1\|WP_003429379.1\|1485530_1485896_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|224647	COG1733, COG1733, Predicted transcriptional regulators [Transcription].	4.48025e-25
NZ_CP046327.1\|WP_003429358.1\|1499905_1500574_-\|diphthine--ammonia-ligase	gnl\|CDD\|238952	cd01994, Alpha_ANH_like_IV, This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This subfamily of proteins is predicted to bind ATP. This domainhas a strongly conserved motif SGGKD at the N terminus.	4.64591e-55
NZ_CP046327.1\|WP_003429356.1\|1500640_1501069_-\|EamA-family-transporter	gnl\|CDD\|377396	pfam04657, DMT_YdcZ, Putative inner membrane exporter, YdcZ. DMT_YdcZ is a family of putative inner membrane exporters from both Gram-positive and Gram-negative bacteria.	2.2504e-17
NZ_CP046327.1\|WP_009893046.1\|1490253_1492488_+\|EAL-domain-containing-protein	gnl\|CDD\|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	4.91602e-92
NZ_CP046327.1\|WP_009889221.1\|1493603_1495337_+\|diguanylate-cyclase	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	1.13206e-46
NZ_CP046327.1\|WP_003429376.1\|1486747_1487422_+\|MgtC/SapB-family-protein	gnl\|CDD\|224204	COG1285, SapB, Uncharacterized membrane protein [Function unknown].	1.38574e-53
NZ_CP046327.1\|WP_009893027.1\|1501888_1502824_+\|TIGR01212-family-radical-SAM-protein	gnl\|CDD\|224163	COG1242, COG1242, Predicted Fe-S oxidoreductase [General function prediction only].	1.21672e-179
NZ_CP046327.1\|WP_009893043.1\|1498432_1499788_+\|MATE-family-efflux-transporter	gnl\|CDD\|240548	cd13143, MATE_MepA_like, Subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins similar to Streptococcus aureus MepA. The integral membrane proteins from the MATE family are involved in exporting metabolites across the cell membrane and are responsible for multidrug resistance (MDR) in many bacteria and animals. This subfamily includes Streptococcus aureus MepA and Vibrio vulnificus VmrA and functions most likely as a multidrug efflux pump.	4.82019e-115
NZ_CP046327.1\|WP_009889225.1\|1485973_1486528_+\|cysteine-hydrolase	gnl\|CDD\|238496	cd01014, nicotinamidase_related, Nicotinamidase_ related amidohydrolases. Cysteine hydrolases of unknown function that share the catalytic triad with other amidohydrolases, like nicotinamidase, which converts nicotinamide to nicotinic acid and ammonia.	3.59583e-56
NZ_CP046327.1\|WP_009889222.1\|1492518_1493364_+\|GGDEF-domain-containing-protein	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	1.16166e-29
NZ_CP046327.1\|WP_079254690.1\|1496945_1497338_-\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	1.53729e-20
NZ_CP046327.1\|WP_009889208.1\|1503094_1504039_-\|EamA-family-transporter	gnl\|CDD\|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	5.18415e-26
NZ_CP046327.1\|WP_009893025.1\|1504354_1505785_+\|PAS-domain-S-box-protein	gnl\|CDD\|226350	COG3829, RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms].	2.45167e-136

>NZ_CP046327.1|WP_009889221.1|1493603_1495337_+|diguanylate-cyclase
MSILLKKAPKLAKHIITSFYINRDINEVLKYLCENVTWIGPGEQEFLTSFNEIKNYFYAGQDEIPSCDINNDVFETVSEDENRCMVLGRYTVRTKENAQMILEVNQRCTFEIIEDRGKLLVKHMHISNPYGEMQLDEYFPTKIGTQSYDYLQRLLKEKTEVIEMITNNINGGLKGSNDDSTYSFFYVNEGLPKILGYTYDEFMEMSGGSAVGAVYPPDLPKALEDCERCFAKGPTYSSEYRIRKKDGTLMWVLDSGMKSLNSDGIVKINSIITDITQLKNIESELKLERERYRIALQNITDIMFEYDIENDTLIKYQRVEIDKKIELENFETKNYSKLLESGKIIHLDDIGKLLEVLHGNLRETIEIRQVNSLTKNEWRWIRVQCSVIYDSDHNPIKTIGVLKDITEDKSKLESLINQAQRDPLTQLYNQRVSQNLIEEYLCSSDSKNNDALLVIDIDDFKTVNDTFGHLEGNEVLVAVSKILLHNTHDKDIVARIGGDEFTIFIKSLTKDLIIKITNDILNDASKIKVKDNHKITLSIGIAFTDDSTKLYKDLFSKADKALYLSKADGKNCYSTYE
>NZ_CP046327.1|WP_009889222.1|1492518_1493364_+|GGDEF-domain-containing-protein
MFKEIFLRTFPGFLIIRDSNYRIIFINDNLKNLIKSYMQDNPLGMTNIEIAKKLPDNIAKFFTDSHNIQLDWEKNYPYDKISNWILEFKKDTTSYWNVLEYKVDVDEKTYIITMANDITKLYEENKRNLHYSITDPLTGAYNRKYLNDRFDIFIGDYIVLIDLDNFKMINDYEGHNVGDKILCDFVSLLNKELINSTSIIRLGGDEFIVIFSSDVDKNYVYSQLEALRENFLKVFSKYKYLSFSYGVDTVKRNLKLTIVELDKKMYKNKEKNKKKFDKNDY
>NZ_CP046327.1|WP_009893046.1|1490253_1492488_+|EAL-domain-containing-protein
MQNHNYIKMLNKKVEVLSKELDSRNFKLKTLNEIDFFSKIPNREFMYQYIDDCISKNIHIGIMLLNIDNFKLFNDIYGYLVGENLLITLTQNLLHFIPESKGIVAYLKGEGFLIVLPNVSNKELNNMGATIIESSRELKIRLPNEKEIYSNVTFSIGSTIWNGEPNMTTLILFNQVYSALKKAKSEGKNRYILFDFKDNSFYNKLENDKEFLSEISHVLQTKQIEVFYQPLYNIKNNTIVGCEALARWRHPIKGLLTPDKFIPLFEQFGLITELDLHLFEENCKNIRRWIDNNDVFVPICCNFSRLHFFNPNFPSMLKGITEKYSVSTSNFSIEITENILIENTNTIIQQLAELRSYGFSVSMDDFGSGYSSFGMLQNLPFDIIKIDRIFLSHNLNDFKNTTILYSIINIARALGMLTVCEGVETEQHVEFIKSINCDIAQGYYYAKPMECKEFEKLLSKENNSEKMFIKYSDIGKSLIEKIFDGFFIMQDMKKLRANVTEDIQWFDFYNKTEITSFPKVIEHFEKHIKGKKFSILYKSITPHNTESDSLLISGEAVLSDEASEHQKYSNFYFSANCIISENKLLLAKLHLDLIKTAGYINEFESYSIPKMTNTHLDESNILSQFYSMLPVGIIRYDLFGDMIITYMNEEMFDIIGYTKEQFFGEMGGNLRAIVHPDDLDFVYKKSLDMIDTNKIEPFLYRFIKRDGQIVTVMYTQCNLSAIDGRSIAQGMYVDVNKIKNLTKI
>NZ_CP046327.1|WP_003429371.1|1488674_1489484_-|MerR-family-transcriptional-regulator
MKDYYKIGEISKIYGIGRDSLMYYEEIGILRPVRDINGYRMYNISDIWKLNLIKEFRSLNFPMKKIKEYLDDRSIESTKNILNEELDLIDKKIAEFISHKENIIKRLSSIESVIQNTKIDEIEVVYIEKRKALELNADIKRDEDFDFLIQKLQKEYEDRFNILGNNNIGSAFSTEAINKGIFNEFKSVFCFLESNEKVYNIVFDEGYYVTLNYTGSNSNNKMYMEKVFKFIEENNYKIIADPIEIYKIDIHETGIVEEFVTEIQVPITK
>NZ_CP046327.1|WP_003438585.1|1488290_1488530_-|hypothetical-protein
MKCSNCGSVNIEKGILTTGGIYAETIGLKYRGDGKLDKVINKTFPVQSTIYSDLCLDCGEIVRTYIKDNTDRNWCKDKK
>NZ_CP046327.1|WP_003429374.1|1487926_1488103_+|hypothetical-protein
MFRDEMDKCTHMLTAYISSLYDYCDFIDTQLDDFILEYGENVVESCLHQVMVLVSKYN
>NZ_CP046327.1|WP_003429376.1|1486747_1487422_+|MgtC/SapB-family-protein
MNHHILIQFEYIARIITAGFCGALIGYERKNRLKEAGIRTHFIVALASALIIIVSKYGFNDIVGTPGIGLDPARVAAQVVSGIGFLGAGLIFIRNQSVSGLTTAAGIWATAGTGLAIGSGLYLVGIVSSIIIVIVQITLHRDRKWMKLPTAEQVSLKISNSTDSIEYIEGKFKKSNIEIINMNIKRLDGDWLEVVIYTKLPKGYKKTNLLKLFSDNPLIETLEI
>NZ_CP046327.1|WP_009889225.1|1485973_1486528_+|cysteine-hydrolase
MSIALILIDIQNDYFKNGKCELFQSEETAENAKKILLFFRKNNLPVIHIQHISTDKTASFFLPNTHGSEINKIVFPLDNEEIIIKHTPDSFFETDLQSILEKKNITNLVICGMMSHMCIDTSVRTAKKLRYDITLISDACTTKNLSWNNIEINANTVHQVFMASLQNSFADVKNTDKFLSNYHK
>NZ_CP046327.1|WP_003429379.1|1485530_1485896_+|helix-turn-helix-transcriptional-regulator
MKIRAEYTCPLEIVHDIIKGKWKTILIFELRQSNKTFSELQHNIYGINQKMLIQQLKELRDFGIIDKISSAGYPLHVEYFLTNRGKKMLKAVEIMQEIGIEYMLEHGQQEILDNKGICYNK
>NZ_CP046327.1|WP_003429381.1|1485165_1485300_-|hypothetical-protein
MNISRKAMKIIELAQKIANKRGISVEEAWSEAVTEYKNKYEHIA
>NZ_CP046327.1|WP_079254690.1|1496945_1497338_-|IS3-family-transposase
MSYVIGKSNNNNLVFETFDKVIKLHPNAKPVFHSDRGFQYTSKVFESKLLAQGMIQSMSRAGRCIDNAPMEGIWGILKVEMYYLRKFDTYEQLVKIIETYIYYYNNFRYQKRLNSMSPLEFRKYLSTEIA
>NZ_CP046327.1|WP_009893043.1|1498432_1499788_+|MATE-family-efflux-transporter
MDTKISINENMSLGKRFFKYLAPSVVAMWVFSLYTMVDGIFVSKGVGELALAAVNISMPFINFIFAVSLLFSTGASTIIAIYLGKKDIKSANEVFSFNLVSIIILSIIILAITFFNLDRLALFLGATESTIGMVKDYLGIIIFFNGFFIVSYSLEVIIKTDGFPILATVGVIISALTNIILDYLFVIEFGWGVKGAGIATVLSQVFSTIFFLIHFLRKNSTLNFSKFRIDFKTLRKIVFIGFPDSTTELSCGIVVLLFNLSLTKYIGENALIYYSVINYINTLVLMTMMGITQGMQPLTSFYYGAGNIDNVKKLLKMGIKATIIASVAVFAICMAFSGPIVSLFIHPEETMLFNEGVRVFKIFSISFLLVGINVIISGFFVSVEKPSISTVISLGRGLVIVVLSLISMILIFGGQGIWMTTIVSEFICLILSLVFLKKNFSTLDSNLNKVA
>NZ_CP046327.1|WP_003429358.1|1499905_1500574_-|diphthine--ammonia-ligase
MKEVLKLADEKFVMSFSGGKDSILALNRMLKKGYKPVALLTTISEEHGKSWTHNLEYNMLKQVSSNIGLPLLVAECGVEGYEESFERALIKAKNMGATICAYGDIDIESHRKWDTDRCEAVGMKVDLPLWQESREDLVYEFIDSGFCSVVTKVNLKHLGEEFLGKKLTRELVEKIKNAGADPCGEHGEYHTFVVDGPIFKKPVEYEVKGTLIKDGYGYLEIK
>NZ_CP046327.1|WP_003429356.1|1500640_1501069_-|EamA-family-transporter
MTKLWAIIFALLAGGSTALEAFINGELGKSTTALVATFISLTVGAIFFLASIIVTGDLKCLVSINGFNYKLLLGGVFGGLIIYFTVKAIPNLGVSNTLILTLVSQVLVGFFIDSVILGQETMHLYKYIGVILLILGTFFIVN
>NZ_CP046327.1|WP_014466364.1|1501220_1501769_+|membrane-protein
MYTNFNIDFNNFNKKENATKFMLMGVLLIILGLLCLTFKTLGIKLISWTFGIALLFFAYLNLKNINELKRYATKEEIKPSINIQWVLIIACILLFVFPQKIQSIFSLFLGFYLIFNQLVALVNSKNNPYSKFTTWNIVKILFGICLILSPLFLSRFIVSIMSFFIILFGLVLFFSGNTARKY
>NZ_CP046327.1|WP_009893027.1|1501888_1502824_+|TIGR01212-family-radical-SAM-protein
MDKFKYAFDDKRYHTWNYYLRNTFGEKVFKVSINAGFTCPNIDGSLGYGGCTYCSKEGSGDFAGNPKDNLISQFYNIKEMMLKKWPHAKYIGYFQAYTNTYAPLEVLKEKYETILELEDVIGLSISTRPDCLPDDVVEYLSELNKRTNLWVELGLQTIHDSTSKIINRGHDYKTFVEGVEKLKSKNIKVVVHIINGLPGEDYNMMMETAKAVGKMGVDGIKIHLLHVIKDTPMEKMLQNGMLTLMEQDEYINLVCDQLEILPETMIIHRLTGDGKRDELVGPIWSLKKWEILNQIDDTLKARNSYQGCKFV
>NZ_CP046327.1|WP_009889208.1|1503094_1504039_-|EamA-family-transporter
MGEKSKGYVFIAIAGLLWATLGLFGKFLMGNGLTSEQVAFTRLFFGFIVLGVYSSIRTPQILKISKKGIIYSVIIGIICQAMFNLCYFKAIDIAGVSIAAVLLYTSPLFLAIFSKVCYKENITRSKLFSLILCFIGAIMAVTGGRLDFQGLNAFGLLLGVLSAIAYALMPTISKNALKEFSSSTILVYSFLFGAIFMIPSSRPWEILNYAKDLDVLSCMLMLGIVPAALAYIFYAAGISKGVELSVAGVVASVELVGSVIIGCTILGESFSLGKLFGVMLMLISAVVALNLSYDEIRIFYKSNKLKQIEKTESI
>NZ_CP046327.1|WP_009893025.1|1504354_1505785_+|PAS-domain-S-box-protein
MNLDLEFYQKILEASHDEICVSDDKGIIIYCNKAFEENYGLKKEDILGKNVSFLEDSGYSTKSPIPIVLKTKTKFSLEQDTQTGKKLIITATPIFDENGNLEFTVENCRDITELNNIKNKLEDTKKQVKKYKSEVETLYRTALRIEDTVIMDGIVMRPIINTVNHVSKTDVSVLLLGESGTGKSSLARYIHHNSNRSNGPFITINCATISPQLLESELFGYTSGAFTGASTKGKVGLVELANGGTLFLDEIGDIPQNLQAKFLQLIQDRTFTPVGSLKNKKVDIRIISATNADLVSKVKEKKFREDLYYRLNVIEIKLPPLRERRDNLVEIIKYYFNRYSSDFNLNKTISKEAMDAIANYRFPGNIRELQNIIQKILLTCTDNHITIDDLPNILTKNIHITNNGNKTHISQINKVIISDSKSTNYKNKNFDTLIKEYEKNIILDAYEKFGSSYKVAKHLEISQSKANRLIRKYTNT
>NZ_CP046327.1|WP_003419819.1|1505984_1506569_+|zinc-dependent-phospholipase-C-family-protein
MLMNTHFIMAKSILDNIDENKTFFISEKNFIYGNIKPDAFSKYKLKKHYLDESFNMIVSKINYLCSLNIDSLSKYFSVSRLSQELGVICHFLCDFFCVAHSERWEFKHSLNKHVTYERELGAFAKDVDLSKIKCGTINSSFEKFFTKLYSDYKKKTDYMNDLKFSAYTCNSVINYILDSILSNTIKSYHIANCG
>NZ_CP046327.1|WP_003438534.1|1506672_1507452_-|Cof-type-HAD-IIB-family-hydrolase
MIKHIFCDLDGTLYENGTITKEDIVAIEEIEKKGVQFNVATGRIFKQAHNIIKDSLDMNGYYVCENGSFIYDKDYNVIFKRTIDDNLVKKVIDRFESSDAQLYFKYKGDVIVGSDTTAFRHYSSDFIVDPDFEKRSSFDNLIGNIGVCSENLEELSRIELYLKSEFSEVLEIYFSGTYTLNIVPKSVSKRGSIEHVIKTLNVSPDEVATIGDSPNDICMLEGFKYSFAMSKAREDVKQSANYVVDSVKSAIDVIMEINS

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Crispr_ID: NZ_CP046327_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046327_8

1704804-1705761

Orphan

I-A

Consensus_repeat	Method
GTTTTATATTAACTAAGTGGTATGTAAAG	PILER-CR
CTTTACATACCACTTAGTTAATATAAAAC	CRISPRCasFinder
CTTTACATACCACTTAGTTAATATAAAAC	CRT

14 spacers

The CRISPR arrays of NZ_CP046327_8

>merge|NZ_CP046327|8|1704804-1705761|PILER-CR,CRISPRCasFinder,CRT
CTTTACATACCACTTAGTTAATATAAAACTAAATATAGCTTGTAACTCCTTTGATGCACTTAAAAGCTTTACATACCACTTAGTTAATATAAAACGAATTTAGCTATAGAAGCATCAAATTGTGGCACAGCACTTTACATACCACTTAGTTAATATAAAACCTTTAAAGACAAAACGTCGTATAATTAAATCATAGCAACTTTACATACCACTTAGTTAATATAAAACCTTATAATTCTTTAAGTACTAGACTGAGCAATTTAATCTTTACATACCACTTAGTTAATATAAAACCATCCCATTCAGCAACAACAGTCGCTAAATCTTCTGCCTTTACATACCACTTAGTTAATATAAAACTTTTAGTATATTTTTTAGGTCTGCCCTCTTTAAAACTCTTTACATACCACTTAGTTAATATAAAACACGAGGTTATAGTTAATTTTGTCGTGGGAGTTTATAACTTTACATACCACTTAGTTAATATAAAACAATTTATATATATATATATATATATTAAAGTCAGACCCCTTTACATACCACTTAGTTAATATAAAACTTGTTGTTCAGCATTAGCAATCATATCATCTATTCCTTTCTTTACATACCACTTAGTTAATATAAAACCTGTACCATCAGAGACAGTCATTAAAAGATTTATAAACTTTACATACCACTTAGTTAATATAAAACTTATAAATTGTCTCTGTACCCATTTTATTCAATGTCGTACTTTACATACCACTTAGTTAATATAAAACCATGAAAAAATGGGTAATTCAAACTCTTTTATTTTCTTTACATACCACTTAGTTAATATAAAACGTTGGAGAAAATAATCCTTCTTATGATTTGCCAAGCGGCTTTACATACCACTTAGTTAATATAAAACCAGCGGATGAATTATTTATGTTAATTGGAGATGGAGACTTTACATACCACTTAGTTAATATAAAAC

>NZ_CP046327|8|7|1704804-1705761|PILER-CR
CTTTACATACCACTTAGTTAATATAAAAC	TAAATATAGCTTGTAACTCCTTTGATGCACTTAAAAG
CTTTACATACCACTTAGTTAATATAAAAC	GAATTTAGCTATAGAAGCATCAAATTGTGGCACAGCA
CTTTACATACCACTTAGTTAATATAAAAC	CTTTAAAGACAAAACGTCGTATAATTAAATCATAGCAA
CTTTACATACCACTTAGTTAATATAAAAC	CTTATAATTCTTTAAGTACTAGACTGAGCAATTTAAT
CTTTACATACCACTTAGTTAATATAAAAC	CATCCCATTCAGCAACAACAGTCGCTAAATCTTCTGC
CTTTACATACCACTTAGTTAATATAAAAC	TTTTAGTATATTTTTTAGGTCTGCCCTCTTTAAAACT
CTTTACATACCACTTAGTTAATATAAAAC	ACGAGGTTATAGTTAATTTTGTCGTGGGAGTTTATAA
CTTTACATACCACTTAGTTAATATAAAAC	AATTTATATATATATATATATATATTAAAGTCAGACCC
CTTTACATACCACTTAGTTAATATAAAAC	TTGTTGTTCAGCATTAGCAATCATATCATCTATTCCTTT
CTTTACATACCACTTAGTTAATATAAAAC	CTGTACCATCAGAGACAGTCATTAAAAGATTTATAAA
CTTTACATACCACTTAGTTAATATAAAAC	TTATAAATTGTCTCTGTACCCATTTTATTCAATGTCGTA
CTTTACATACCACTTAGTTAATATAAAAC	CATGAAAAAATGGGTAATTCAAACTCTTTTATTTT
CTTTACATACCACTTAGTTAATATAAAAC	GTTGGAGAAAATAATCCTTCTTATGATTTGCCAAGCGG
CTTTACATACCACTTAGTTAATATAAAAC	CAGCGGATGAATTATTTATGTTAATTGGAGATGGAGA
CTTTACATACCACTTAGTTAATATAAAAC

>NZ_CP046327|8|8|1704804-1705761|CRISPRCasFinder
CTTTACATACCACTTAGTTAATATAAAAC	TAAATATAGCTTGTAACTCCTTTGATGCACTTAAAAG
CTTTACATACCACTTAGTTAATATAAAAC	GAATTTAGCTATAGAAGCATCAAATTGTGGCACAGCA
CTTTACATACCACTTAGTTAATATAAAAC	CTTTAAAGACAAAACGTCGTATAATTAAATCATAGCAA
CTTTACATACCACTTAGTTAATATAAAAC	CTTATAATTCTTTAAGTACTAGACTGAGCAATTTAAT
CTTTACATACCACTTAGTTAATATAAAAC	CATCCCATTCAGCAACAACAGTCGCTAAATCTTCTGC
CTTTACATACCACTTAGTTAATATAAAAC	TTTTAGTATATTTTTTAGGTCTGCCCTCTTTAAAACT
CTTTACATACCACTTAGTTAATATAAAAC	ACGAGGTTATAGTTAATTTTGTCGTGGGAGTTTATAA
CTTTACATACCACTTAGTTAATATAAAAC	AATTTATATATATATATATATATATTAAAGTCAGACCC
CTTTACATACCACTTAGTTAATATAAAAC	TTGTTGTTCAGCATTAGCAATCATATCATCTATTCCTTT
CTTTACATACCACTTAGTTAATATAAAAC	CTGTACCATCAGAGACAGTCATTAAAAGATTTATAAA
CTTTACATACCACTTAGTTAATATAAAAC	TTATAAATTGTCTCTGTACCCATTTTATTCAATGTCGTA
CTTTACATACCACTTAGTTAATATAAAAC	CATGAAAAAATGGGTAATTCAAACTCTTTTATTTT
CTTTACATACCACTTAGTTAATATAAAAC	GTTGGAGAAAATAATCCTTCTTATGATTTGCCAAGCGG
CTTTACATACCACTTAGTTAATATAAAAC	CAGCGGATGAATTATTTATGTTAATTGGAGATGGAGA
CTTTACATACCACTTAGTTAATATAAAAC

>NZ_CP046327|8|7|1704804-1705761|CRT
CTTTACATACCACTTAGTTAATATAAAAC	TAAATATAGCTTGTAACTCCTTTGATGCACTTAAAAG
CTTTACATACCACTTAGTTAATATAAAAC	GAATTTAGCTATAGAAGCATCAAATTGTGGCACAGCA
CTTTACATACCACTTAGTTAATATAAAAC	CTTTAAAGACAAAACGTCGTATAATTAAATCATAGCAA
CTTTACATACCACTTAGTTAATATAAAAC	CTTATAATTCTTTAAGTACTAGACTGAGCAATTTAAT
CTTTACATACCACTTAGTTAATATAAAAC	CATCCCATTCAGCAACAACAGTCGCTAAATCTTCTGC
CTTTACATACCACTTAGTTAATATAAAAC	TTTTAGTATATTTTTTAGGTCTGCCCTCTTTAAAACT
CTTTACATACCACTTAGTTAATATAAAAC	ACGAGGTTATAGTTAATTTTGTCGTGGGAGTTTATAA
CTTTACATACCACTTAGTTAATATAAAAC	AATTTATATATATATATATATATATTAAAGTCAGACCC
CTTTACATACCACTTAGTTAATATAAAAC	TTGTTGTTCAGCATTAGCAATCATATCATCTATTCCTTT
CTTTACATACCACTTAGTTAATATAAAAC	CTGTACCATCAGAGACAGTCATTAAAAGATTTATAAA
CTTTACATACCACTTAGTTAATATAAAAC	TTATAAATTGTCTCTGTACCCATTTTATTCAATGTCGTA
CTTTACATACCACTTAGTTAATATAAAAC	CATGAAAAAATGGGTAATTCAAACTCTTTTATTTT
CTTTACATACCACTTAGTTAATATAAAAC	GTTGGAGAAAATAATCCTTCTTATGATTTGCCAAGCGG
CTTTACATACCACTTAGTTAATATAAAAC	CAGCGGATGAATTATTTATGTTAATTGGAGATGGAGA
CTTTACATACCACTTAGTTAATATAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046327.1\|WP_009888987.1\|1711106_1712624_+\|recombinase-family-protein	unknown	unknown	gnl\|CDD\|238206
NZ_CP046327.1\|WP_003438168.1\|1713027_1714692_-\|penicillin-binding-protein-2	unknown	unknown	gnl\|CDD\|223839
NZ_CP046327.1\|WP_104694836.1\|1706668_1707601_-\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP046327.1\|WP_009888998.1\|1703431_1703587_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046327.1\|WP_009888988.1\|1710160_1710982_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP046327.1\|WP_009888992.1\|1707561_1708233_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|379233
NZ_CP046327.1\|WP_011861152.1\|1699548_1699668_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046327.1\|WP_009889006.1\|1700473_1700689_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046327.1\|WP_022619734.1\|1703305_1703407_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046327.1\|WP_009889007.1\|1699170_1699488_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046327.1\|WP_003433383.1\|1700871_1701216_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046327.1\|WP_009889003.1\|1702511_1702625_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046327.1\|WP_100882476.1\|1708175_1708400_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046327.1\|WP_009888982.1\|1715997_1716672_-\|O-methyltransferase	unknown	unknown	gnl\|CDD\|226607
NZ_CP046327.1\|WP_009888990.1\|1708542_1709970_-\|cell-wall-binding-protein-Cwp26	unknown	unknown	gnl\|CDD\|380277
NZ_CP046327.1\|WP_003419270.1\|1702934_1703186_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046327.1\|WP_009889008.1\|1698309_1698879_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046327.1\|WP_009888984.1\|1714763_1716011_-\|U32-family-peptidase	unknown	unknown	gnl\|CDD\|223896
NZ_CP046327.1\|WP_003433385.1\|1701342_1701726_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046327.1\|WP_003438164.1\|1716843_1717923_-\|endolytic-transglycosylase-MltG	unknown	unknown	gnl\|CDD\|376862

Protein	Function_ID	Function_description	E-value
NZ_CP046327.1\|WP_003438168.1\|1713027_1714692_-\|penicillin-binding-protein-2	gnl\|CDD\|223839	COG0768, FtsI, Cell division protein FtsI/penicillin-binding protein 2 [Cell envelope biogenesis, outer membrane].	5.50889e-97
NZ_CP046327.1\|WP_009888987.1\|1711106_1712624_+\|recombinase-family-protein	gnl\|CDD\|238206	cd00338, Ser_Recombinase, Serine Recombinase family, catalytic domain; a DNA binding domain may be present either N- or C-terminal to the catalytic domain. These enzymes perform site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and serine recombinase. Serine recombinases demonstrate functional versatility and include resolvases, invertases, integrases, and transposases. Resolvases and invertases (i.e. Tn3, gamma-delta, Tn5044 resolvases, Gin and Hin invertases) in this family contain a C-terminal DNA binding domain and comprise a major phylogenic group. Also included are phage- and bacterial-encoded recombinases such as phiC31 integrase, SpoIVCA excisionase, and Tn4451 TnpX transposase. These integrases and transposases have larger C-terminal domains compared to resolvases/invertases and are referred to as large serine recombinases. Also belonging to this family are proteins with N-terminal DNA binding domains similar to IS607- and IS1535-transposases from Helicobacter and Mycobacterium.	1.71171e-29
NZ_CP046327.1\|WP_104694836.1\|1706668_1707601_-\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	9.63714e-48
NZ_CP046327.1\|WP_009888990.1\|1708542_1709970_-\|cell-wall-binding-protein-Cwp26	gnl\|CDD\|380277	NF033435, S-layer_Clost, S-layer protein SlpA. In Clostridiodes difficile, the S-layer protein precursor, SlpA, is one member of a large paralogous family of protein that share several cell wall-binding repeats. SlpA is cleaved into a larger and smaller protein. The S-layer protein itself is important to adhesion, and portions of it are highly variable, and then N-terminal and C-terminal are well-conserved.	1.07946e-17
NZ_CP046327.1\|WP_009888988.1\|1710160_1710982_+\|hypothetical-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	3.63351e-09
NZ_CP046327.1\|WP_009888992.1\|1707561_1708233_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|379233	pfam13518, HTH_28, Helix-turn-helix domain. This helix-turn-helix domain is often found in transposases and is likely to be DNA-binding.	1.21802e-08
NZ_CP046327.1\|WP_003438164.1\|1716843_1717923_-\|endolytic-transglycosylase-MltG	gnl\|CDD\|376862	pfam02618, YceG, YceG-like family. This family of proteins is found in bacteria. Proteins in this family are typically between 332 and 389 amino acids in length. This family was previously incorrectly annotated and names as aminodeoxychorismate lyase. The structure of YceG was solved by X-ray crystallography.	3.18128e-117
NZ_CP046327.1\|WP_009888984.1\|1714763_1716011_-\|U32-family-peptidase	gnl\|CDD\|223896	COG0826, COG0826, Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones].	9.81255e-145
NZ_CP046327.1\|WP_009888982.1\|1715997_1716672_-\|O-methyltransferase	gnl\|CDD\|226607	COG4122, COG4122, Predicted O-methyltransferase [General function prediction only].	1.3234e-60

>NZ_CP046327.1|WP_009888998.1|1703431_1703587_-|hypothetical-protein
MALDVKIEVKIIKDVVILNIIHWKKETSLLTVKIARGQGDLSYVKYFTNES
>NZ_CP046327.1|WP_022619734.1|1703305_1703407_-|hypothetical-protein
MSLETMLTINKRRMAEEGVCKFKRDKLNKLDTI
>NZ_CP046327.1|WP_003419270.1|1702934_1703186_-|hypothetical-protein
MSSYFITRGDVMKILQQFKPYKYDKEKNIEYDEKIIANQNTEVYIVYPRISDEENRRRWEEFNEVAKEVAINIAMKKVETVES
>NZ_CP046327.1|WP_009889003.1|1702511_1702625_-|hypothetical-protein
MVEVNIKIKGEVSEIIDSIRGIFNSFDEELILDIKSE
>NZ_CP046327.1|WP_003433385.1|1701342_1701726_+|hypothetical-protein
MRKKFFIGILIVLIISVIAILNIKNDKNVFIGESENWKAKFVTTEGHSKLEIKYKNSKDVVEQKFNYSYQFIDGEDAVVVVKNEILEAGQEKAIKIQRPGLYSNRESSYKLIISWNGNEETINLKKK
>NZ_CP046327.1|WP_003433383.1|1700871_1701216_-|hypothetical-protein
MNYRLKKSVTTILSLLIMTILLPTNASASKVEDSSMKVMYSEKQVTDMDKLYDMAKNGITDVKSSNEKGIIKNARTGESIYVDSISTTQLLEVKQSKNLTSKIYSKTVFLILIQ
>NZ_CP046327.1|WP_009889006.1|1700473_1700689_-|hypothetical-protein
MHINQTGFISNGLGIKQQQKKEPTSNSFSYNAPSSWKPVGRDSVQYNCGFELIATLVREGSSWAFNFIVQP
>NZ_CP046327.1|WP_011861152.1|1699548_1699668_+|hypothetical-protein
MFFKVNKSLLYGNDLNIIKYRNGDFFMNNLRKQLIKEII
>NZ_CP046327.1|WP_009889007.1|1699170_1699488_+|hypothetical-protein
MDFGNINLILIGIIVIIGTTIIYLIKPKTAFCSKKYFNKLESIYGNIDKKKTVKLEVLYRYVTGLEYISIGLFTRRLDITIIAIILVATITVILYYLVRKRYITI
>NZ_CP046327.1|WP_009889008.1|1698309_1698879_+|hypothetical-protein
MKLRNPKIKKLLSVALLAALIGIPIGQTANAMEISNNVPSYIENNPTTIEDLEINDSQLPKPGTVTYIDINKLIKNLKENGIDTTLIENELYYRKAGTNKIVWTKTGFDLYLSKGVALTLAGAGTGVAGLLAGAIPGIGQYLAAAIVGAITMHLGSNITSGKIFKFKKMRYNKGGAYVTKYYLQSVRNQ
>NZ_CP046327.1|WP_104694836.1|1706668_1707601_-|IS3-family-transposase
MLKKVKNHRKRVVITLSKNEDKYKAIQSLFNEKKASLIQLCEIAKVNRSGYYKWLNRDKSNLELENIKLATLITKIYEEKKGVFGSLRMTLQLNREYKLNVNHKRVYRLMRAVGLRSICRKKKFSYVKCTPEVIAENVLNRKFSADKTSQKWLTDVTEFKLTNGTKAYLSAILDLGDRSIVSYVIGKSNNNNLVFETFNKAIEVYPNAKPIFHSDRGYQYTSRVFKSKLLTQGMIQSMSRVGHCIDNAPMEGFWGILKVEMYYLRKFDTYEQLVKAIDDYIYYYNNFRYQKRLNSMSPLEFRKYLSTEIA
>NZ_CP046327.1|WP_009888992.1|1707561_1708233_-|helix-turn-helix-domain-containing-protein
MSKTKVSSEQKIEAIESYLKGENSVIKIMEELNIGKRTFREWMRNYETFGNDGLIKQSHKSCYSKEFKLNAIESYLNGEGSYDTISKKYKMRSVHPLKAWVKEYNLHKVIKETPKGGLFMETRKTTLDERAEIVKDCIEHDLNYNLIAKKYFVSYSQVRRWTLKYKENGIDALEDRRGKAKKEDELTQLDEIKLELKIVKAEKHKLQLENEFLKKLKIIERGW
>NZ_CP046327.1|WP_100882476.1|1708175_1708400_-|hypothetical-protein
MDNFLFNVLASLTASVVVYLISKLFKKAKSHSRMNYTPLRRQLKYVKLSKTRRVLLCLKLKYHQSKKSKQLNHI
>NZ_CP046327.1|WP_009888990.1|1708542_1709970_-|cell-wall-binding-protein-Cwp26
MKIKKLLTIGLSLSIFIASCPISANALDKIESIKGADKYETAGIIADKQNYTTAILINADSTMADGLSASGLAGAINAPILLTKKNNIPNATLKRLEKAKKVYIIGGENSINKYTETVLKGKGIEIKRLQGSDRIKTSYNVAKEINSINKVNKVILTNAFKGEPDAMSAAPVAVRDKAAIVLTDGKSVPFNTTGVESYVIGGTSSMNDKLVKDTNSTRLGGTDRYDTNKKIINKFYSGVKEFYIASGTDLVYALVGSTIAKNNAIVLVGNDSNKSVLKSTIKLTAIGNLSDSILQQCLNVTKNIGDSNTGREYTVEDAANAVKKLLGVKKFYYEPNYSEDEDLIFLLDKNFDFSGKEYYVFAYIKQGAEGDVRYCVAKNDMSKVYTYDVNGNMKVCNPDDYKNKGSITEEQAKQIALKECAKRHKVSINNLVVDMIDFRDDIYSGNVYAVKINSKNSNGTFGWFFIDIETGKIYN
>NZ_CP046327.1|WP_009888988.1|1710160_1710982_+|hypothetical-protein
MIISKKITAILVSFLIMISMVGCAPKESATEVAKKYLDSIEIKDYEVAYNLLSKDSKESVSLEKFEEYQDTLFKLQTLKDYKLGEENKVEKYKYSNKEYTNLVKIKETDTIKYITENKEDTANFDRYFIIEDNEYKLLWHKDFKRALSSNYVKIARSETKKDEDKDYNKAAIDIKKAIEIDDKNPLAYYTQSYIYIELQRYDEALKSIDKSLEYLDKNNEAYKIDASDAYNLRGVIFMSKSEFNKARESYNKALELNPDNEYAKTNLNDIKGL
>NZ_CP046327.1|WP_009888987.1|1711106_1712624_+|recombinase-family-protein
MSVAIYLRKSRADEEAEKQGEFETLSRHKSTLLKLAKEQNLDVIEIKEELVSGESIIHRPKMLELLKEVEENKYDAVLVMDLDRLGRGDMKDQGIILETFKESKTKIITPRKTYDLTDEFDEEYSEFEAFMARKELKLISRRMQRGRIKSVEEGNFIGTSAPFGYDAVTTGRKERILVPNKDADVVRTIFDLYINEDMGCSKISKYLNNLGIKTATGANWYNSAITNIIKNKVYCGYIQWQKKDYKKSKNPNKIKTVKLRPKDEWIEAKGKHEPLISEITWKKAQNILKKNGHVSYGNQIKNPLAGIVICKNCGRPLVYRPYADHDYIICYHPGCNKSSRFEFIEAAILKSLEDTVKKYQLKACDLDLDKNNKDSNIEFQKRVLKGLETELKELGKQKNKLYDLLERGIYDEDTFIERSNNISSRTEEIKDSIKTVKNRLSTVKKDNSKIIEDIKTVLSLYHDSDSLGKNKLLKSVIDKAIYYKSKEQKLDSFELMVHLKLHEDQ
>NZ_CP046327.1|WP_003438168.1|1713027_1714692_-|penicillin-binding-protein-2
MSKKKTPFLKKVGKRSWCIFTIILIIYSVLIYRLVDIQVLKGDKYKQSVESQSVEKVELNSGRGIIYDRNNKKLTDTSKSQVLIVEKEKLNNNYKILELIKKATKMNDLDIYKAVQEQLTRPIIQIQTKNIDKSMKKELEKNGIMVEEKTMRYAKDGLLSHTIGYIKEDDKSGQSGIEKSMDSVLRNSNEKYISAFKAGDAGNEKSLNILKGSVKTVDNKDKDRHLKTTIDYNIQKKLEQILNKEENPTAAIISEASTGEILAMCSRPNFDQNDISKSLKGKNGEFENRVIKATYPPGSVFKMVVLFSALENGVIDENYTYNCTGKTKVGNTNEILRCNKRDGHGFQNLRQAFSNSCNPAFLDIAMKLGKEKILKSAEKLHLFEKVDIGLDEEKIREAPKNISIRNLAIGQENIEFTPLQINQMTQIIANNGTFKPLYLYKSLVDNNMNTIKTYKSSKKEELISPYVCTQVKEYMKSVSRIGTAKDLKDIEGGCGVKTGTAQSSLNKKAIDHGWITGFYPEERPKYVITVLVEGTQKGNKSATPIFKEICESIK
>NZ_CP046327.1|WP_009888984.1|1714763_1716011_-|U32-family-peptidase
MELNKVELLAPAGDLERLKIAITYGADAVYIGGEIFGMRSAAKNFSKEDMAEGVAFAHERGKKVFVTVNIIPHNEDFLQLEDYLLELEEIGIDAVIIADPGVLSVIKKVIPNMEIHLSTQANTTNYLSANFWYEHGIKRVVVARELSFDEISEIRAKTPLDMDIEAFMHGAMCISYSGRCLISNYMTGRDANKGSCAQSCRWQYHLVEEKRPGEYFPIYEDERGTFFFNSKDLCMIEYIPELIKSGITSLKIEGRMKTAYYVATVVRAYRMAIDEFYRAPENWKFNPMWMEELKKGSHRHFTSGFYLNKPTTEDQNYQSASYVRNYDFIGIVRETEDEDGLIVVEQRNKMCVGDEIEVMGPYKETMFTKIEEMYNEEGEAIESAPHPRQIVKLKLSVKVGKDYMLRKVIEEKVEE
>NZ_CP046327.1|WP_009888982.1|1715997_1716672_-|O-methyltransferase
MSNIVNDLVEDYIRVTLKEKEGFLKDLEIYAEENSVPIIHKEVSDLLKVLLKVQKPKRILEVGCAIGYSSIFFASIIGKDADIITVERNEKMIEKAKENIKLAGFDNNITILEGDAEEKLSQVQGEFDLIFIDAAKGQYKLFFDLVIDKLKDGGLLVSDNILYKGMVAHDDFVVRRKKTIVKRMRNYLDYICNCDYLSTSLVPIGDGVALSYKESKRGDVDGIK
>NZ_CP046327.1|WP_003438164.1|1716843_1717923_-|endolytic-transglycosylase-MltG
MNFKENRLKIAVLIIVILIILAGIFVFIQIGPYDKNNKKDVIIDVPSGASVGKISDILYENKLIKNELLFKLLVKVSNKAPSIKSGTYLLNQSYSNNDIISLLVSGKIYQDGIKVTIPEGATSKEIIAMLVSKNLGDKATFENLIKKPQEFYDKFPYLKEDGITSLEGFLYPETYYFNSKKQSEEDILSEMLKVFDSKYTDKFKKKQKELNMTLQEVMEMASIIEKEAVLDKDRPIIASVFYNRLKVGMPLQSDATIQYIFEERKKIVTYDDLKIDSPYNSYKNKGLPPTPISNPGIKSIEAALYPEKTDYLYFVAKIDGGNNYSTNYQDHLKYVKEYKEARDKQSKDTKATNKENTKK

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Crispr_ID: NZ_CP046327_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046327_9

2283787-2283869

Orphan

Consensus_repeat	Method
TGCATAATACCATCTTCACTAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP046327_9

>merge|NZ_CP046327|9|2283787-2283869|CRISPRCasFinder
TGCATAATACCATCTTCACTAAAGTAGAACGTCTTATCTTCTATATTTAGATAACCATATTGCATAATACCATCTTCATTAAA

>NZ_CP046327|9|9|2283787-2283869|CRISPRCasFinder
TGCATAATACCATCTTCACTAAA	GTAGAACGTCTTATCTTCTATATTTAGATAACCATAT
TGCATAATACCATCTTCATTAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046327.1\|WP_003439186.1\|2270144_2270882_+\|multidrug-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226663
NZ_CP046327.1\|WP_003426839.1\|2282938_2283439_-\|holin-like-glycosylating-toxin-export-protein-TcdE	unknown	unknown	gnl\|CDD\|273708
NZ_CP046327.1\|WP_009888444.1\|2282698_2282830_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046327.1\|WP_009888434.1\|2299044_2299902_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP046327.1\|WP_009892729.1\|2274078_2282211_-\|glycosylating-toxin-TcdA	unknown	unknown	gnl\|CDD\|372383
NZ_CP046327.1\|WP_009888454.1\|2271401_2271704_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046327.1\|WP_009888452.1\|2271915_2272185_+\|DUF3795-domain-containing-protein	unknown	unknown	gnl\|CDD\|378914
NZ_CP046327.1\|WP_009888457.1\|2269371_2270133_+\|multidrug-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|378937
NZ_CP046327.1\|WP_009888450.1\|2272401_2272647_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371697
NZ_CP046327.1\|WP_032508306.1\|2294297_2295518_-\|voltage-gated-chloride-channel-protein	unknown	unknown	gnl\|CDD\|239654
NZ_CP046327.1\|WP_009888436.1\|2296695_2297430_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293807
NZ_CP046327.1\|WP_077699421.1\|2282427_2282610_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046327.1\|WP_009888435.1\|2298403_2299042_-\|ABC-2-transporter-permease	unknown	unknown	gnl\|CDD\|379133
NZ_CP046327.1\|WP_003434528.1\|2290991_2291546_-\|glycosylating-toxin-sigma-factor-TcdR	unknown	unknown	gnl\|CDD\|274357
NZ_CP046327.1\|WP_003440174.1\|2301411_2302602_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046327.1\|WP_009888433.1\|2299903_2300278_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224639
NZ_CP046327.1\|WP_009888448.1\|2273183_2273744_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372196
NZ_CP046327.1\|WP_009888439.1\|2293041_2294235_-\|potassium-transporter	unknown	unknown	gnl\|CDD\|223104
NZ_CP046327.1\|WP_009888440.1\|2292454_2292835_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|367747
NZ_CP046327.1\|WP_021396554.1\|2300380_2300509_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP046327.1\|WP_003439186.1\|2270144_2270882_+\|multidrug-ABC-transporter-permease	gnl\|CDD\|226663	COG4200, COG4200, Uncharacterized protein conserved in bacteria [Function unknown].	4.95244e-26
NZ_CP046327.1\|WP_003426839.1\|2282938_2283439_-\|holin-like-glycosylating-toxin-export-protein-TcdE	gnl\|CDD\|273708	TIGR01593, Uncharacterized_protein_CPE0383, toxin secretion/phage lysis holin. This model describes one of the many mutally dissimilar families of holins, phage proteins that act together with lytic enzymes in bacterial lysis. This family includes, besides phage holins, the protein TcdE/UtxA involved in toxin secretion in Clostridium difficile and related species. [Protein fate, Protein and peptide secretion and trafficking, Mobile and extrachromosomal element functions, Prophage functions].	5.64663e-25
NZ_CP046327.1\|WP_009888434.1\|2299044_2299902_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	6.61555e-71
NZ_CP046327.1\|WP_009892729.1\|2274078_2282211_-\|glycosylating-toxin-TcdA	gnl\|CDD\|372383	pfam12920, TcdA_TcdB_pore, TcdA/TcdB pore forming domain. This family represents the most conserved region within the C. difficile Toxin A and Toxin B pore forming region.	0
NZ_CP046327.1\|WP_009888452.1\|2271915_2272185_+\|DUF3795-domain-containing-protein	gnl\|CDD\|378914	pfam12675, DUF3795, Protein of unknown function (DUF3795). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and archaea. Proteins in this family are typically between 99 and 171 amino acids in length. This protein is likely to be zinc binding given the conserved cysteines.	1.55811e-09
NZ_CP046327.1\|WP_003434528.1\|2290991_2291546_-\|glycosylating-toxin-sigma-factor-TcdR	gnl\|CDD\|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	4.881e-07
NZ_CP046327.1\|WP_009888457.1\|2269371_2270133_+\|multidrug-ABC-transporter-permease	gnl\|CDD\|378937	pfam12730, ABC2_membrane_4, ABC-2 family transporter protein. This family is related to the ABC-2 membrane transporter family pfam01061.	2.30189e-13
NZ_CP046327.1\|WP_009888450.1\|2272401_2272647_-\|hypothetical-protein	gnl\|CDD\|371697	pfam11731, Cdd1, Pathogenicity locus. Cdd1 is expressed as part of the pathogenicity locus operon in several different orders of bacteria. Many members of the family are annotated as being putative mitomycin resistance proteins but this could not be confirmed.	8.62571e-29
NZ_CP046327.1\|WP_032508306.1\|2294297_2295518_-\|voltage-gated-chloride-channel-protein	gnl\|CDD\|239654	cd03682, ClC_sycA_like, ClC sycA-like chloride channel proteins. This ClC family presents in bacteria, where it facilitates acid resistance in acidic soil. Mutation of this gene (sycA) in Rhizobium tropici CIAT899 causes serious deficiencies in nodule development, nodulation competitiveness, and N2 fixation on Phaseolus vulgaris plants, due to its reduced ability for acid resistance. This family is part of the ClC chloride channel superfamiy. These proteins catalyse the selective flow of Cl- ions across cell membranes and Cl-/H+ exchange transport. These proteins share two characteristics that are apparently inherent to the entire ClC chloride channel superfamily: a unique double-barreled architecture and voltage-dependent gating mechanism. The gating is conferred by the permeating anion itself, acting as the gating charge.	7.12598e-152
NZ_CP046327.1\|WP_009888436.1\|2296695_2297430_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293807	cd07721, yflN-like_MBL-fold, uncharacterized subgroup which includes Bacillus subtilis yflN; MBL-fold metallo hydrolase domain. This subgroup includes the uncharacterized Bacillus subtilis yflN protein. Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) from which this fold was named are only a small fraction of the activities which are included in this superfamily. Activities carried out by superfamily members include class B beta-lactamases, hydroxyacylglutathione hydrolases, AHL (acyl homoserine lactone) lactonases, persulfide dioxygenases, flavodiiron proteins, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J and ribonuclease Z, cyclic nucleotide phosphodiesterases, insecticide hydrolases, and proteins required for natural transformation competence. Classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, however the diversity of biological roles is reflected in variations in the active site metallo-chemistry.	5.29011e-60
NZ_CP046327.1\|WP_009888435.1\|2298403_2299042_-\|ABC-2-transporter-permease	gnl\|CDD\|379133	pfam13346, ABC2_membrane_5, ABC-2 family transporter protein. This family is related to the ABC-2 membrane transporter family pfam01061.	1.81716e-13
NZ_CP046327.1\|WP_009888433.1\|2299903_2300278_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|224639	COG1725, COG1725, Predicted transcriptional regulators [Transcription].	4.25488e-31
NZ_CP046327.1\|WP_009888448.1\|2273183_2273744_+\|hypothetical-protein	gnl\|CDD\|372196	pfam12569, NARP1, NMDA receptor-regulated protein 1. This domain family is found in eukaryotes, and is approximately 40 amino acids in length. The family is found in association with pfam07719, pfam00515. There is a single completely conserved residue L that may be functionally important. NARP1 is the mammalian homolog of a yeast N-terminal acetyltransferase that regulates entry into the G(0) phase of the cell cycle.	0.000309088
NZ_CP046327.1\|WP_009888439.1\|2293041_2294235_-\|potassium-transporter	gnl\|CDD\|223104	COG0025, NhaP, NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism].	7.10297e-29
NZ_CP046327.1\|WP_009888440.1\|2292454_2292835_-\|hypothetical-protein	gnl\|CDD\|367747	pfam03965, Penicillinase_R, Penicillinase repressor. The penicillinase repressor negatively regulates expression of the penicillinase gene. The N-terminal region of this protein is involved in operator recognition, while the C-terminal is responsible for dimerization of the protein.	2.51191e-07

>NZ_CP046327.1|WP_003426839.1|2282938_2283439_-|holin-like-glycosylating-toxin-export-protein-TcdE
MHSSSPFYISNGNKIFFYINLGGVMNMTISFLSEHIFIKLVILTISFDTLLGCLSAIKSRKFNSSFGIDGGIRKVAMIACIFFLSVVDILTKFNFLFMLPQDCINFLRLKHLGISEFFSILFILYESVSILKNMCLCGLPVPKRLKEKIAVLLDAMTDEMNAKDEK
>NZ_CP046327.1|WP_009888444.1|2282698_2282830_-|hypothetical-protein
MPRDTQVLNTYNFEASVHYYMDDKVVYQTLVHKDGAWSVGKIY
>NZ_CP046327.1|WP_077699421.1|2282427_2282610_-|hypothetical-protein
MRDEGQNDRENKYQTLINDLIDSLKVIGKIYKEIKTLKKYKICLQITIRQSPYLIEESIN
>NZ_CP046327.1|WP_009892729.1|2274078_2282211_-|glycosylating-toxin-TcdA
MSLISKEELIKLAYSIRPRENEYKTILTNLDEYNKLTTNNNENKYLQLKKLNESIDVFMNKYKNSSRNRALSNLKKDILKEVILIKNSNTSPVEKNLHFVWIGGEVSDIALEYIKQWADINAEYNIKLWYDSEAFLVNTLKKAIVESSTTEALQLLEEEIQNPQFDNMKFYKKRMEFIYDRQKRFINYYKSQINKPTVPTIDDIIKSHLVSEYNRDETLLESYRTNSLRKINSNHGIDIRANSLFTEQELLNIYSQELLNRGNLAAASDIVRLLALKNFGGVYLDVDMLPGIHSDLFKTIPRPSSIGLDRWEMIKLEAIMKYKKYINNYTSENFDKLDQQLKDNFKLIIESKSEKSEIFSKLENLNVSDLEIKIAFALGSVINQALISKQGSYLTNLVIEQVKNRYQFLNQHLNPAIESDNNFTDTTKIFHDSLFNSATAENSMFLTKIAPYLQVGFMPEARSTISLSGPGAYASAYYDFINLQENTIEKTLKASDLIEFKFPENNLSQLTEQEINSLWSFDQASAKYQFEKYVRDYTGGSLSEDNGVDFNKNTALDKNYLLNNKIPSNNVEEAGSKNYVHYIIQLQGDDISYEATCNLFSKNPKNSIIIQRNMNESAKSYFLSDDGESILELNKYRIPERLKNKEKVKVTFIGHGKDEFNTSEFARLSVDSLSNEISSFLDTIKLDISPKNVEVNLLGCNMFSYDFNVEETYPGKLLLSIMDKITSTLPDVNKDSITIGANQYEVRINSEGRKELLAHSGKWINKEEAIMSDLSSKEYIFFDSIDNKLKAKSKNIPGLASISEDIKTLLLDASVSPDTKFILNNLKLNIESSIGDYIYYEKLEPVKNIIHNSIDDLIDEFNLLENVSDELYELKKLNNLDEKYLISFEDISKNNSTYSVRFINKSNGESVYVETEKEIFSKYSEHITKEISTIKNSIITDVNGNLLDNIQLDHTSQVNTLNAAFFIQSLIDYSSNKDVLNDLSTSVKVQLYAQLFSTGLNTIYDSIQLVNLISNAVNDTINVLPTITEGIPIVSTILDGINLGAAIKELLDEHDPLLKKELEAKVGVLAINMSLSIAATVASIVGIGAEVTIFLLPIAGISAGIPSLVNNELILHDKATSVVNYFNHLSESKEYGPLKTEDDKILVPIDDLVISEIDFNNNSIKLGTCNILAMEGGSGHTVTGNIDHFFSSPYISSHIPSLSVYSAIGIKTENLDFSKKIMMLPNAPSRVFWWETGAVPGLRSLENNGTKLLDSIRDLYPGKFYWRFYAFFDYAITTLKPVYEDTNTKIKLDKDTRNFIMPTITTDEIRNKLSYSFDGAGGTYSLLLSSYPISMNINLSKDDLWIFNIDNEVREISIENGTIKKGNLIEDVLSKIDINKNKLIIGNQTIDFSGDIDNKDRYIFLTCELDDKISLIIEINLVAKSYSLLLSGDKNYLISNLSNTIEKINTLGLDSKNIAYNYTDESNNKYFGAISKTSQKSIIHYKKDSKNILEFYNGSTLEFNSKDFIAEDINVFMKDDINTITGKYYVDNNTDKSIDFSISLVSKNQVKVNGLYLNESVYSSYLDFVKNSDGHHNTSNFMNLFLNNISFWKLFGFENINFVIDKYFTLVGKTNLGYVEFICDNNKNIDIYFGEWKTSSSKSTIFSGNGRNVVVEPIYNPDTGEDISTSLDFSYEPLYGIDRYINKVLIAPDLYTSLININTNYYSNEYYPEIIVLNPNTFHKKVNINLDSSSFEYKWSTEGSDFILVRYLEESNKKILQKIRIKGILSNTQSFNKMSIDFKDIKKLSLGYIMSNFKSFNSENELDRDHLGFKIIDNKTYYYDEDSKLVKGLININNSLFYFDPIESNLVTGWQTINGKKYYFDINTGAASTSYKIINGKHFYFNNNGVMQLGVFKGPDGFEYFAPANTQNNNIEGQAIVYQSKFLTLNGKKYYFDNDSKAVTGWRIINNEKYYFNPNNAIAAVGLQVIDNNKYYFNPDTAIISKGWQTVNGSRYYFDTDTAIAFNGYKTIDGKHFYFDSDCVVKIGVFSGSNGFEYFAPANTYNNNIEGQAIVYQSKFLTLNGKKYYFDNNSKAVTGWQTIDSKKYYFNTNTAEAATGWQTIDGKKYYFNTNTAEAATGWQTIDGKKYYFNTNTSIASTGYTIINGKYFYFNTDGIMQIGVFKVPNGFEYFAPANTHNNNIEGQAILYQNKFLTLNGKKYYFGSDSKAITGWQTIDGKKYYFNPNNAIAATHLCTINNDKYYFSYDGILQNGYITIERNNFYFDANNESKMVTGVFKGPNGFEYFAPANTHNNNIEGQAIVYQNKFLTLNGKKYYFDNDSKAVTGWQTIDSKKYYFNLNTAVAVTGWQTIDGEKYYFNLNTAEAATGWQTIDGKRYYFNTNTYIASTGYTIINGKHFYFNTDGIMQIGVFKGPDGFEYFAPANTHNNNIEGQAILYQNKFLTLNGKKYYFGSDSKAVTGLRTIDGKKYYFNTNTAVAVTGWQTINGKKYYFNTNTYIASTGYTIISGKHFYFNTDGIMQIGVFKGPDGFEYFAPANTDANNIEGQAIRYQNRFLYLHDNIYYFGNDSKAATGWATIDGNRYYFEPNTAMGANGYKTIDNKNFYFRNGLPQIGVFKGPNGFEYFAPANTDANNIDGQAIRYQNRFLHLLGKIYYFGNNSKAVTGWQTINSKVYYFMPDTAMAAAGGLFEIDGVIYFFGVDGVKAPGIYG
>NZ_CP046327.1|WP_009888448.1|2273183_2273744_+|hypothetical-protein
MFFGNISSPACSEDHEEVISNQTSVIDSQKTEIETLNSKLSDAEPWFKMKDDEKKAIEAENQRKAEEAKKAEEQRKKEEEEKKGYDTGITYDQLARTPDDYKYKKVKFEGKVIQVIEDGDEVQIRLAVSGNYDKVVLCSYKKSITPSRVLEDDYITIRGISAGTITYESTMGGKITIPGIAVEKIN
>NZ_CP046327.1|WP_009888450.1|2272401_2272647_-|hypothetical-protein
MGELQKIPGVGKATEKSLIMLGYTTIKSLKDANPAQMYEKECLMRGQHIDRCQLYVYRCAVYFASTENPEPEKLKWWYWKD
>NZ_CP046327.1|WP_009888452.1|2271915_2272185_+|DUF3795-domain-containing-protein
MFESRCGVCCDSCTKKEQVNCTGCPTMEKPFWGGECKVKTCCESKELNHCGECDTFPCDMLLNKGKDQGFDPMVNIGQCRKWLEETVSN
>NZ_CP046327.1|WP_009888454.1|2271401_2271704_+|hypothetical-protein
MKYSKGFKLIYSLVEYSKKFKVIYSVMKYSKGFKLIYSLVEYSKRFKLIYDVMKYSKEFKLIYSLVEYSKRFKVIYSVMKYSKRFKAIYNAVKYIQGDLK
>NZ_CP046327.1|WP_003439186.1|2270144_2270882_+|multidrug-ABC-transporter-permease
MLRKSVLGEILKLKNSFIWYVLLALPLISVLIGSGNFYLNQGILKKEWYSLWTQVSLFYGEFFFPILIAIFCAYICRLEHMNHNWNNVMTLPVNLKNIFLSKLTVVSILTAITQVFFVIFYIVAGNMFGFSGSVPKELTGWIAKGWIISISIASIQLYMSIKIRSFATPIGISLCLSLFGMGLIVAKPAVGIFFPYSMLGSAMGVIKQSALNVNDTIVTICVAFITTIVFSEIANRNFRKNDVIS
>NZ_CP046327.1|WP_009888457.1|2269371_2270133_+|multidrug-ABC-transporter-permease
MKYLGLEFYKLKRKKIILMTFLFVAVEIMWCIVNSNRAITRNPDMLGGFEYSYMLMSFASLNGLFFPILISIITSRISDIEHKGDTWKLLKSSVTSLNSIYLSKFLCSAILVSIPILMQVLSIVLFGHFRGVIESISVSLLLKYTLGTILVSIAIIALHLWIATVIPNQMIAITFGMIGSFIGLTSGLFYQGIRRLFIWSYYLELSPLSYAYDNVLGSSVYRIDMNFSITILVFLIGMLIYYIGRNHLLKKEV
>NZ_CP046327.1|WP_003434528.1|2290991_2291546_-|glycosylating-toxin-sigma-factor-TcdR
MQKSFYELIVLARNNSVDDLQEILFMFKPLVKKLSRVLHYEEGETDLIIFFIELIKNIKLSSFSEKSDAIIVKYIHKSLLNKTFELSRRYSKMKFNFVEFDENILNMKNNYQSKSVFEEDICFFEYILKELSGIQRKVIFYKYLKGYSDREISVKLKISRQAVNKAKNRAFKKIKKDYENYFNL
>NZ_CP046327.1|WP_009888440.1|2292454_2292835_-|hypothetical-protein
MYLKKLSKLELVIMKFIWNLDIKTNSYEIIDYMKEEHNLPEKVALKILSKLSKKRFLYVQETGKCMYYTVAIKEKTYLEFISRNVQNLLKNNFIRNLLVSFHEEELTEEKIKSLENWVVNWEEAYI
>NZ_CP046327.1|WP_009888439.1|2293041_2294235_-|potassium-transporter
MLTSLALIFLLGMASGGIFEKIKLPSLLGMLLTGIILGSYVLNLIDNSILDISSDLRKIALIIILTRAGLSLDINDLKKVGRPAVLMCFIPATFEIIGMIVLAPKLLGVSILEAAVMGAVVGAVSPAIIVPKMLKLMEEGYGTEKSIPQMLLAGTSIDDIFVIVMFTVFTGLAQGNSISAISFLQIPVSIILGVIVGAVIGICLAVFFKKVHMRDSAKGVLLLSISFLMISLETALEGIVPFSGLLAVMNIGIFLQIKYRVVARRLSVKYSKLWVGAEILLFVLVGATVDISYAFKAGIGAVILIFGVLLFRMVGVFFCLIKTNLTIKERLFCMIGYIPKATVQAAIGGVPLAMGIASGQLILTLAVLAILITAPLGAFGIDVTYKKLLTSVEGKSK
>NZ_CP046327.1|WP_032508306.1|2294297_2295518_-|voltage-gated-chloride-channel-protein
MIIRIKSVYKTYGGLFLLGLIGIPVGAIIGLIDTIFGTVLLKVTDIRETYPMYLIPFLAVVGVVIAYCYFKFGGKSSKGMNLIFEVGHGEEEIIPLRLVPFIISGTWLTHLFGGSAGREGVAVQIGATFSHWVGKRLPIKNASSIFLVTGIAAGFAGLFETPIAAILFAMEVLVAGSLEYQSLFPAFTASFTASAVSKTLGLEKFSFALSSKVVFDLPIFWKLIVLGIIFGMVGGAFAWCLKLSKRKIGNRLKNPMIRIAIIGVCLSVLFLLFYKGRYSGLGTNLIQNSFYGGEIYSFDWLLKFILTILTLSAGFQGGEVTPLFSIGASLGVLLAGFFNLPIELVAALGYASVFGSATNTFFAPVFIGAEVFGYSYLPYFFVVCAISYIFNMDKSIYSLQKISTKQ
>NZ_CP046327.1|WP_009888436.1|2296695_2297430_-|MBL-fold-metallo-hydrolase
MNLAKGLDVLKISSNVFGEDKVMYIPVIYTEDDATLIDTGLPGQGDLIIDALNKSNTSFDRLKNIIITHHDIDHIGNINYLREKSKNNIKVYAYKSEVSYITGEETPFKLYMLEQMVDKIDDKMLSMLNVMVLGFKSSYTKVDVSLDNHEKLNLGEEIEVIHTGGHTRGHICLYLKESKVLIAGDLLQVENGELTPVDVMHSNKQELKDAIKNISNYDIETIVFSHGGLYQRDIIGTLKNLIIE
>NZ_CP046327.1|WP_009888435.1|2298403_2299042_-|ABC-2-transporter-permease
MLIHLVKKDILIVKKYVLLILFIAIGIPLFILWRLPPFAQILGFVLSIIFSEFMLCQYLLLKESQYSKASVLLCSTPYPRRGLVQSKYVLFAMVFIYCTLVYWIENLLIPQIGTFDLTYILIVLLISSIIYGVYMPIQYKLGYETTKFFFVMIIMASSFVLPLTIAHSNFEIPFIYQYPSMIVNIVLFLLSLIILLASMFISIKIFSNKELV
>NZ_CP046327.1|WP_009888434.1|2299044_2299902_-|ABC-transporter-ATP-binding-protein
MENILEVYNLNKTYTNFSLSNISFVLPEDCITGFIGVNGAGKTTTIRSILDVVKRDSGKIKIFGKDFDGNEKELKNRIGVVFDDSYFYEELSMSEMKSIIAPSYDNWCEEDYQQNMKRFNLNPKQKIDTLSKGMKMKFALALALSHKAEFLIMDEPTSGLDPLIRSQILDILTEYMKKCGRGVFFSTHITSDLDKIADMIVMIDNGRIILEREKDTLLDEHRKVKGDIQFLNDEIKKLFLNLEITGYGFIGITSKINEVQKNMPDILIERPTIEDIMLAYIERRE
>NZ_CP046327.1|WP_009888433.1|2299903_2300278_-|GntR-family-transcriptional-regulator
MKVLISNTSDKPLYQQIKEQIKEAIFTEELKEGDAMPSIRNFANDLKVSILTIRRVYEELENEGFLTRQVGIGTFVSTGNLEILRDSKRRIVEQKMADMIKDAKALGITQIELQEMMGILYEED
>NZ_CP046327.1|WP_021396554.1|2300380_2300509_+|hypothetical-protein
MNEILEIIDSHKHFLKPHKIECIKYLLKVRIEYLKEKVILYE
>NZ_CP046327.1|WP_003440174.1|2301411_2302602_-|hypothetical-protein
MSDMLLWFSVVLVLFAIGDLIASKTKAKVSAVFVTLLLFLILFVTKAIPADIIEKAGMTAAASWSVPMIMFSMGTMLNVKQFIDEWRTVLTAWLGIVAVIVCVSLCIPLFGKSTVLTSIPVINGALPATTIMTQAALEKGLTLAAATATVVFAIQKFIGTPIASRAALQEANRLLVEYHEAKSKGIDLANVDTDKKEAENTGTKVKQAFCEKYDKYYSTNVCIFFIALFSYLGYELSEIIHVNYSIVCLVVGVIVTRIGIVPKDILEKGKIKGFINMVVFAAVIPSLAKVSLTDLISLFVPIVGMFAASIIGIFLMMKVLPGWKIIGSKPLAFGVGFCQMLGFPTTYLISNEVCNAVGETEEERAYLMSKIMPKLVVGGMACMISIVVAGLMVPML

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Crispr_ID: NZ_CP046327_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046327_10

2861364-2861443

Orphan

Consensus_repeat	Method
TTATAATATTATCCACATTATAAACA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP046327_10

>merge|NZ_CP046327|10|2861364-2861443|CRISPRCasFinder
TTATAATATTATCCACATTATAAACAGTTGATTCATATTGCTTTAACTTATTACATTAAATATTATCCACATTATAAACA

>NZ_CP046327|10|10|2861364-2861443|CRISPRCasFinder
TTATAATATTATCCACATTATAAACA	GTTGATTCATATTGCTTTAACTTATTAC
ATTAAATATTATCCACATTATAAACA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046327.1\|WP_003427737.1\|2881707_2882511_-\|energy-coupling-factor-transporter-transmembrane-protein-EcfT	unknown	unknown	gnl\|CDD\|223692
NZ_CP046327.1\|WP_003420701.1\|2845618_2846521_-\|phosphate-butyryltransferase	unknown	unknown	gnl\|CDD\|180267
NZ_CP046327.1\|WP_003432598.1\|2861923_2862463_-\|anaerobic-ribonucleoside-triphosphate-reductase-activating-protein	unknown	unknown	gnl\|CDD\|274161
NZ_CP046327.1\|WP_011860637.1\|2846708_2846828_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046327.1\|WP_009892490.1\|2865208_2866393_+\|pyridoxal-phosphate-dependent-aminotransferase	unknown	unknown	gnl\|CDD\|235596
NZ_CP046327.1\|WP_003420710.1\|2841732_2842485_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|239470
NZ_CP046327.1\|WP_003435654.1\|2880944_2881676_-\|tRNA-pseudouridine(38-40)-synthase-TruA	unknown	unknown	gnl\|CDD\|234577
NZ_CP046327.1\|WP_003420711.1\|2841174_2841732_-\|2-oxoglutarate-ferredoxin-oxidoreductase-subunit-gamma	unknown	unknown	gnl\|CDD\|376567
NZ_CP046327.1\|WP_009899606.1\|2878761_2879466_-\|N-acetylmuramoyl-L-alanine-amidase-CwlD	unknown	unknown	gnl\|CDD\|274337
NZ_CP046327.1\|WP_003420704.1\|2843850_2844528_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046327.1\|WP_003421105.1\|2879972_2880365_-\|30S-ribosomal-protein-S9	unknown	unknown	gnl\|CDD\|178888
NZ_CP046327.1\|WP_009887937.1\|2882504_2883371_-\|energy-coupling-factor-transporter-ATPase	unknown	unknown	gnl\|CDD\|237455
NZ_CP046327.1\|WP_003420697.1\|2848002_2848842_-\|TIGR00159-family-protein	unknown	unknown	gnl\|CDD\|224539
NZ_CP046327.1\|WP_003421107.1\|2880393_2880825_-\|50S-ribosomal-protein-L13	unknown	unknown	gnl\|CDD\|181703
NZ_CP046327.1\|WP_003420706.1\|2843592_2843808_-\|4Fe-4S-dicluster-domain-containing-protein	unknown	unknown	gnl\|CDD\|225131
NZ_CP046327.1\|WP_003432442.1\|2842484_2843564_-\|3-methyl-2-oxobutanoate-dehydrogenase-subunit-VorB	unknown	unknown	gnl\|CDD\|235942
NZ_CP046327.1\|WP_003420702.1\|2844517_2845597_-\|butyrate-kinase	unknown	unknown	gnl\|CDD\|235099
NZ_CP046327.1\|WP_009892488.1\|2862484_2864836_-\|anaerobic-ribonucleoside-triphosphate-reductase	unknown	unknown	gnl\|CDD\|235937
NZ_CP046327.1\|WP_009887945.1\|2846824_2848006_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227193
NZ_CP046327.1\|WP_003435660.1\|2883358_2884192_-\|energy-coupling-factor-transporter-ATPase	unknown	unknown	gnl\|CDD\|275313

Protein	Function_ID	Function_description	E-value
NZ_CP046327.1\|WP_003427737.1\|2881707_2882511_-\|energy-coupling-factor-transporter-transmembrane-protein-EcfT	gnl\|CDD\|223692	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism].	1.3503e-50
NZ_CP046327.1\|WP_003420701.1\|2845618_2846521_-\|phosphate-butyryltransferase	gnl\|CDD\|180267	PRK05805, PRK05805, phosphate butyryltransferase; Validated.	1.26101e-179
NZ_CP046327.1\|WP_003420711.1\|2841174_2841732_-\|2-oxoglutarate-ferredoxin-oxidoreductase-subunit-gamma	gnl\|CDD\|376567	pfam01558, POR, Pyruvate ferredoxin/flavodoxin oxidoreductase. This family includes a region of the large protein pyruvate-flavodoxin oxidoreductase and the whole pyruvate ferredoxin oxidoreductase gamma subunit protein. It is not known whether the gamma subunit has a catalytic or regulatory role. Pyruvate oxidoreductase (POR) catalyzes the final step in the fermentation of carbohydrates in anaerobic microorganisms. This involves the oxidative decarboxylation of pyruvate with the participation of thiamine followed by the transfer of an acetyl moiety to coenzyme A for the synthesis of acetyl-CoA. The family also includes pyruvate flavodoxin oxidoreductase as encoded by the nifJ gene in cyanobacterium which is required for growth on molecular nitrogen when iron is limited.	1.49735e-43
NZ_CP046327.1\|WP_009892490.1\|2865208_2866393_+\|pyridoxal-phosphate-dependent-aminotransferase	gnl\|CDD\|235596	PRK05764, PRK05764, aspartate aminotransferase; Provisional.	2.82682e-180
NZ_CP046327.1\|WP_003420710.1\|2841732_2842485_-\|MFS-transporter	gnl\|CDD\|239470	cd03375, TPP_OGFOR, Thiamine pyrophosphate (TPP family), 2-oxoglutarate ferredoxin oxidoreductase (OGFOR) subfamily, TPP-binding module; OGFOR catalyzes the oxidative decarboxylation of 2-oxo-acids, with ferredoxin acting as an electron acceptor. In the TCA cycle, OGFOR catalyzes the oxidative decarboxylation of 2-oxoglutarate to succinyl-CoA. In the reductive tricarboxylic acid cycle found in the anaerobic autotroph Hydrogenobacter thermophilus, OGFOR catalyzes the reductive carboxylation of succinyl-CoA to produce 2-oxoglutarate. Thauera aromatica OGFOR has been shown to provide reduced ferredoxin to benzoyl-CoA reductase, a key enzyme in the anaerobic metabolism of aromatic compounds. OGFOR is dependent on TPP and a divalent metal cation for activity.	1.15077e-77
NZ_CP046327.1\|WP_003435654.1\|2880944_2881676_-\|tRNA-pseudouridine(38-40)-synthase-TruA	gnl\|CDD\|234577	PRK00021, truA, tRNA pseudouridine(38-40) synthase TruA.	6.63504e-129
NZ_CP046327.1\|WP_003432598.1\|2861923_2862463_-\|anaerobic-ribonucleoside-triphosphate-reductase-activating-protein	gnl\|CDD\|274161	TIGR02491, Anaerobic_ribonucleoside-triphosphate_reductase, anaerobic ribonucleoside-triphosphate reductase activating protein. This enzyme is a member of the radical-SAM family (pfam04055) and utilizes S-adenosyl methionine, an iron-sulfur cluster and a reductant (dihydroflavodoxin) to produce a glycine-centered radical in the class III (anaerobic) ribonucleotide triphosphate reductase (NrdD, TIGR02487). The two components form an alpha-2/beta-2 heterodimer. [Purines, pyrimidines, nucleosides, and nucleotides, 2'-Deoxyribonucleotide metabolism, Protein fate, Protein modification and repair].	3.78376e-50
NZ_CP046327.1\|WP_009899606.1\|2878761_2879466_-\|N-acetylmuramoyl-L-alanine-amidase-CwlD	gnl\|CDD\|274337	TIGR02883, spore_cwlD, N-acetylmuramoyl-L-alanine amidase CwlD. Members of this protein family are the CwlD family of N-acetylmuramoyl-L-alanine amidase. This family has been called the germination-specific N-acetylmuramoyl-L-alanine amidase. CwlD is required, along with the putative deactylase PdaA, to make muramic delta-lactam, a novel peptidoglycan constituent found only in spores. CwlD mutants show a germination defect. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan, Cellular processes, Sporulation and germination].	2.81962e-78
NZ_CP046327.1\|WP_003421105.1\|2879972_2880365_-\|30S-ribosomal-protein-S9	gnl\|CDD\|178888	PRK00132, rpsI, 30S ribosomal protein S9; Reviewed.	3.31674e-84
NZ_CP046327.1\|WP_009887937.1\|2882504_2883371_-\|energy-coupling-factor-transporter-ATPase	gnl\|CDD\|237455	PRK13637, cbiO, energy-coupling factor transporter ATPase.	0
NZ_CP046327.1\|WP_003420697.1\|2848002_2848842_-\|TIGR00159-family-protein	gnl\|CDD\|224539	COG1624, COG1624, Uncharacterized conserved protein [Function unknown].	1.4029e-80
NZ_CP046327.1\|WP_003421107.1\|2880393_2880825_-\|50S-ribosomal-protein-L13	gnl\|CDD\|181703	PRK09216, rplM, 50S ribosomal protein L13; Reviewed.	1.05591e-98
NZ_CP046327.1\|WP_003420706.1\|2843592_2843808_-\|4Fe-4S-dicluster-domain-containing-protein	gnl\|CDD\|225131	COG2221, DsrA, Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits [Energy production and conversion].	6.6539e-10
NZ_CP046327.1\|WP_003432442.1\|2842484_2843564_-\|3-methyl-2-oxobutanoate-dehydrogenase-subunit-VorB	gnl\|CDD\|235942	PRK07119, PRK07119, 2-ketoisovalerate ferredoxin reductase; Validated.	0
NZ_CP046327.1\|WP_003420702.1\|2844517_2845597_-\|butyrate-kinase	gnl\|CDD\|235099	PRK03011, PRK03011, butyrate kinase; Provisional.	0
NZ_CP046327.1\|WP_009892488.1\|2862484_2864836_-\|anaerobic-ribonucleoside-triphosphate-reductase	gnl\|CDD\|235937	PRK07111, PRK07111, anaerobic ribonucleoside triphosphate reductase; Provisional.	0
NZ_CP046327.1\|WP_009887945.1\|2846824_2848006_-\|hypothetical-protein	gnl\|CDD\|227193	COG4856, COG4856, Uncharacterized protein conserved in bacteria [Function unknown].	2.07958e-23
NZ_CP046327.1\|WP_003435660.1\|2883358_2884192_-\|energy-coupling-factor-transporter-ATPase	gnl\|CDD\|275313	TIGR04520, ECF_ATPase_1, energy-coupling factor transporter ATPase. Members of this family are ATP-binding cassette (ABC) proteins by homology, but belong to energy coupling factor (ECF) transport systems. The architecture in general is two ATPase subunits (or a double-length fusion protein), a T component, and a substrate capture (S) component that is highly variable, and may be interchangeable in genomes with only one T component. This model identifies many but not examples of the upstream member of the pair of ECF ATPases in Firmicutes and Mollicutes. [Transport and binding proteins, Unknown substrate].	2.34653e-173

>NZ_CP046327.1|WP_003420697.1|2848002_2848842_-|TIGR00159-family-protein
MLDINSFLNGFFNIILRMSIYDLIDISIVAYIFYKIFMFIKDTRAEQVFKGIIFLLLATQLSNTFKLHTVYWISLKALDYGVIAALIIFQPEFRAGLEHIGRAKFNLFGKNVNTSEETLNRNIEEIVEALYSLSRQKIGALIIMERETRISDIINTGTIIDAEISRQLLINIFIPNTPLHDGAVVIRDSKVKAAACFLPLTESKDLSKDLGTRHRAGIGVSEVSDCITLIVSEETGGVSIAKAGKLYRDISRERMMNILRSNLKTNTETRSFFKGGIFK
>NZ_CP046327.1|WP_009887945.1|2846824_2848006_-|hypothetical-protein
MINRLKNNTKIKIISFLSAIALWMYVMAVVDPEETKGFEDIPVSISNMSDLKDKNLVIYPDEKLTADVYIKGSLSKVQSVKKEDIHVYGTIEDPIQGQKEVYLKANIPQGVTLEFKHDVLVVNLEKNIKEKRDIKVEVSGNSKRNINKIELSKEFVDVSGPRTLVKEVKSVRANLDVGNETDDFSKKLQLIPLNSDGTKVEGVTLSSSFVTAKIELLKEKIVPIRVSLNDNKDNDVLKNYKLSKEQVTIKGKKEDIDKISYIKTKPIDLADLANGEEKEVSLEIPEGITLEDSSITIKLNDTKQLSAEFLYNAGDIELRNIPTNIDNPNVISDVDIKVVVESTEDLSKLNKKDISLYIDLSQGPEEDSKYKIKYETTYQFKKINIEPNIVEVE
>NZ_CP046327.1|WP_011860637.1|2846708_2846828_-|hypothetical-protein
MNKYFEYLVVTRCDKKTYKIKFVNFMFLLHLVYFSYIIK
>NZ_CP046327.1|WP_003420701.1|2845618_2846521_-|phosphate-butyryltransferase
MRSFEEVIKFAKERGPKTISVACCQDKEVLMAVEMARKEKIANAILVGDIEKTKEIAKSIDMDIENYELIDIKDLAEASLKSVELVSQGKADMVMKGLVDTSIILKAVLNKEVGLRTGNVLSHVAVFDVEGYDRLFFVTDAAMNLAPDTNTKKQIIENACTVAHSLDISEPKVAAICAKEKVNPKMKDTVEAKELEEMYERGEIKGCMVGGPFAIDNAVSLEAAKHKGINHPVAGRADILLAPDIEGGNILYKALVFFSKSKNAGVIVGAKAPIILTSRADSEETKLNSIALGVLMAAKA
>NZ_CP046327.1|WP_003420702.1|2844517_2845597_-|butyrate-kinase
MSKIFKILTINPGSTSTKIAVFDNEDLVFEKTLRHSSEEIGKYEKVSDQFEFRKQVIEEALKEGGVKTSELDAVVGRGGLLKPIKGGTYSVSAAMIEDLKVGVLGEHASNLGGIIAKQIGEEVNVPSYIVDPVVVDELEDVARISGMPEISRASVVHALNQKAIARRYAREINKKYEDINLIVAHMGGGVSVGAHKNGKIVDVANALDGEGPFSPERSGGLPVGALVKMCFSGKYTQDEIKKKIKGNGGLVAYLNTNDAREVEERIEAGDEKAKLVYEAMAYQISKEIGASAAVLKGDVKAILLTGGIAYSKMFTEMIADRVKFIADVKVYPGEDEMIALAQGGLRVLTGEEEAQVYDN
>NZ_CP046327.1|WP_003420704.1|2843850_2844528_-|hypothetical-protein
MITNDKRIRIITGHYGSGKSEFAMNYVVKLRDMVSGKVAIADLDVVNVYFRTREKKELMKSLGIQPIDSSINAPTLDLPAVSAEVMSPMVDHSYNSVIDLGGDNVGARVIGRFSHLLKEGDYDMLFVINANREKTQTSEEVIQYIKEIEKSSKLKVTGLINNTHLIRFTTIDDVLRGQKVAKEVSEKCNIPIRYVACLENLVEQLPKDLEGEIFPIKLYMREDWM
>NZ_CP046327.1|WP_003420706.1|2843592_2843808_-|4Fe-4S-dicluster-domain-containing-protein
MAKGKVSFNQERCKGCGLCVEACPVKIIQLDSNVINKKGYNPATVFEMEKCIGCASCATMCPDVVITVERD
>NZ_CP046327.1|WP_003432442.1|2842484_2843564_-|3-methyl-2-oxobutanoate-dehydrogenase-subunit-VorB
MAKILMKGNEAFGKAAIEAGCKYFFGYPITPQSELPEYLSRELPKIGGAFVQAESEVSAINMVYGGAGAGARVMTSSSSPGVALKQEGITYAVGAEVPCVVLNVMRGGPGLGSIQPSQADYFMSTRGGGNGDYRTPVFAPATVQEAVDMIMEAFDVADYYRSPVMVVADGMIGQMMEPVEFRAPEKKRELPPKDWATVGTKGKRKPNVINSLYLEPEVLEDHCWHLQEKFDAMEKNEVQYEMYKTEDAEFVFAAYGTTSRVVKSAIDILREEGIKAGLIRPKVLWPFPFEAFNQIPNARNILTVEMSMGQMVEDVKMAVEGKLPVYFHGRPGGMTPTPAEIVEKAKKIIAGELVAGGAR
>NZ_CP046327.1|WP_003420710.1|2841732_2842485_-|MFS-transporter
MAVVFKKTEGLQDTQTHYCPGCTHGIIHRLVGEVLEELGVLGDAVGVVPVGCSVLGYKYFNCDTQEAAHGRAPAAATGIKRVHPENTVFTYQGDGDLASIGTAEIVHAAARGEKITTIFVNNTTYGMTGGQMAPTTLVGQRATTAQSGRNAETQGYPIRVSEMLATLTGAVFVERVAVDTPAHVRQAKKAIKKAFQVQQAGLGFGIVEVLSTCPTNWGLAPNDALQWLRDNMIPYYPLGNFKNVEVEEVK
>NZ_CP046327.1|WP_003420711.1|2841174_2841732_-|2-oxoglutarate-ferredoxin-oxidoreductase-subunit-gamma
MSTARVICAGFGGQGVMSMGQLLTYAGMLEGKEVSWLPSYGPEMRGGTANCAVTVSNEPVGSPLITDDATAAILLNIPAFEKFKDDVIPGGKIIVNSSLIKEKVDRTDVDVYYIPANELAAELGNDKVANMIMLGAYLKVSDTVDIESVLEAFKKVFGPRKEKFVPLNREALQKGMDATCSKATN
>NZ_CP046327.1|WP_003432598.1|2861923_2862463_-|anaerobic-ribonucleoside-triphosphate-reductase-activating-protein
MKIRMSSTISYDSIVDGPGLRMVIWTQGCIHNCKECHNPQTHDLCGGFYMDTEEIINKVKSLKLQKGITLSGGEPFLQPEPLEEIAREAKINGLDVWSYTGFTFEQLLDKKNRAYFKNLNLLKQIDILVDGKFIAEKKDISLKFRGSSNQRIIDVQKSLKYKKVFLVEQYMKDDLSIAE
>NZ_CP046327.1|WP_009892488.1|2862484_2864836_-|anaerobic-ribonucleoside-triphosphate-reductase
MVEFVKKRDGRVIPFNEDRITRAIFLAATNVAEREGIVPDYKLSEQLTQEVIKFLNHKYSESVPSVEDIQDSVVKVLIETGHAKTSEEYIIYRTERSRIRNSKTRLMKAIEEITFEDAEDADIKRENANINGNTAMGTMLQYGSTVSKEFCKTHILKPEHSFAHDNGDIHIHDMDFLNMGTLTCCQIDVKKLFNGGFSTGHGFLREPQDIISYGALAAIAIQSNQNDQHGGQSIPFFDYGLAEGVYKTFKKFYIGNLAKALKLFKGIENNDVIKNIVYNTEKETNQKVGLKRDELYLNLEKEKLIQTFDIDDELVNKMQNFAFEESYRETDKKTYQSMEAFIHNLNTMHSRAGAQVPFSSVNFGTDTSEEGRMVTKNLLLSQERGLGNGETPIFPILIFKVKEGINLNPEDPNYDLFKLSCRVSAKRLFPNFSFLDAPFNAKYYKKGEPDTEATYMGCRTRVLSNVCGSETVSGRGNISFTTVNLPRLGIKHGIINNEKANLDGFFEELDEKINLIIEQLLERFEVQGNKKMKNFPFLMGQGVWKGSDDLVPEDTLKEVIKQGTLTIGFIGLAECLIALIGKHHGESKEAQELGLKIVSHMRHKMDEATDKYKLNFSLMGTPAEGLSGRFTKIDKKVYGEIKGITDKEYYTNSFHVPVYYNISAYDKIEIEAPYHELTNAGHITYVELDGDPSDNLEAFETVIKAMKDLGIGYGSINHPVDRDPICGFSGVITSNICPVCGRNEDESDIKFERIRRITGYLVGTVDRFNNAKKAEVRDRVKHR
>NZ_CP046327.1|WP_009892490.1|2865208_2866393_+|pyridoxal-phosphate-dependent-aminotransferase
MLSKRLNFITPSYTIGISSKVKEMESNGVKVINLSIGEPDFNVPNNAKSYGIDSLNKDYTKYDLVPGLKILREEICKKLIEENNCNYSIDEIVVSSGAKNSITNTLLALTDEGDEVLLPKPYWVSYPEMIKLVNAVPVFIDTKKENGFKLTKEELEKSITDKTKILVINNPSNPTGSVYTKDELIEIVDVCIQNKIYILADEIYEKICYTGEFTSIASLSEEAKDITITINGFSKSAAMTGLRLGYTASNKTIAKAMSSIQGHLISHPSLTAQYIAYGALKDCSIDIDNMVKTYKSRRDLIKSKLDSIDNVGYVNPNGAFYIFIDLSKVSEKFEYKDSFSIEFCNQFLEEYNVAVVPGIAFGMDKYIRISYACSENTFLSGLDKLKEFVYKIMA
>NZ_CP046327.1|WP_009899606.1|2878761_2879466_-|N-acetylmuramoyl-L-alanine-amidase-CwlD
MRKYIKHIIFSFAMICLVVVSIFEIKNISEDVIKYMPVTNKTIILDAGHGGIDPGALNKDKSTSEKDINLAITLKLRELIESSGGLVILTREDDSSLYKEENNKTTRQKYNENLKNRKEIISNSNANMFVSIHLNAFEQSKYYGAQTFYPKDKQDSKELSKCIQEELKRVVDKTNNREVKPRDDIYLLKENNIPSVLIECGFLSNEKECKLLTDETYQEKIAWAIYIGIQKYLS
>NZ_CP046327.1|WP_003421105.1|2879972_2880365_-|30S-ribosomal-protein-S9
MANVQYYGTGRRKSSVARVRLVAGEGNILVNGRALENYFNYETLIRDVKQPLVLTGNENKYDVIVKVEGGGFTGQAGAIRHGISRALLKADLDLRPALKKEGFLTRDARMKERKKYGLKAARRAPQFSKR
>NZ_CP046327.1|WP_003421107.1|2880393_2880825_-|50S-ribosomal-protein-L13
MKSYIAKPADVQRKWYLVDAEGKTLGRLATEIATVLRGKHKPTFTPHVDGGDFVVVVNAEKIVLSGKKLDQKYYRYHTGYVGGLKEISYRDMMDKKPEEVISHAVSGMLPKNKLRSRMMTRLRVFAGAEHTHAAQNPEVLNFK
>NZ_CP046327.1|WP_003435654.1|2880944_2881676_-|tRNA-pseudouridine(38-40)-synthase-TruA
MRNIKIKIQYNGKNYCGWQKQPDSLGIQGTIERAIYDITKEETSLIGSGRTDSGVHAIGQIANFKINSGISIESIPMALNAKLPKDISVIEACEVNDDFHSRYSAKGKTYKYLVYNSKFRNPILSEISYQVKYELDFDKMCSEAKSLLGTHDFKGFMSSGSSVKDTVRTIYDIDISKKDDLITFEISGNGFLYNMVRIIVGTLVDMGRGRINEPFLDIIQSKTRSRCGHTAPAQGLFLKKVHY
>NZ_CP046327.1|WP_003427737.1|2881707_2882511_-|energy-coupling-factor-transporter-transmembrane-protein-EcfT
MLKDITIGQYYPTSSAIHKLDPRIKLVATIVFMVSIFVVNKFWPYIVVLLCLLAMIKLANIPVKYIVKGVKPLKWIILFTFLINIFFLPGDEIWSFGFLAITKQGLRQAIFMAIRLIFLVVGTSLLTLTTSPIELTDGIERLLNPFKKIGLPVHELAMMMTIALRFIPTLLDETDKIMKAQMSRGADFESKNLINRAKNLVPLLVPLFVSAFRRADELAMAMEARCYRGGHNRTKMRESVISRRDYMACVFQVVYLGAIIATRFIAI
>NZ_CP046327.1|WP_009887937.1|2882504_2883371_-|energy-coupling-factor-transporter-ATPase
MSIIVKNLTHIYNEGMPFASKALDDISFEIKDRDFVGLIGHTGSGKSTLIQHLNGLLKPSSGEIFINDFNITDKNLNLTEIRKRVGVVFQYPEYQLFEETIDKDIAFGPSNLGLEESEIHNRVKASMEAVGLDYEGFKDKSPFELSGGQKRRVAIAGVIAMNPEVLILDEPTAGLDPGGRDEIFNLIKDLHEKKNMTIILSSHSMDDMAKLAKTLIVMNHGSVEFMGTPREVFKSNASKLKDIGLDIPQVLELALKLREKGFDISEDILTLEEAKQEILKVVRGRGLC
>NZ_CP046327.1|WP_003435660.1|2883358_2884192_-|energy-coupling-factor-transporter-ATPase
MDNIVKVNNISFEYITDEAKLKAIDNLSLDVKKGEFVAIIGHNGSGKSTLSKNLNAILMPTEGNILIDDMDTKEEERLWDIRQTAGMVFQNPDNQIVATIVEEDVAFGPENLGIEPKEIRRIVEESLKSVGMYDLRDRQPHLLSGGQKQRVAIAGIIAMRPKCIIFDEATAMLDPSGRKEVMKTIKRLNKEENITVIHITHFMEEAVEADRVVVMEKGKKILEGTPREVFSKIKMLKEIGLDVPCMTELSSLLIEEGINISSDILTVDEMVMELCQL

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Crispr_ID: NZ_CP046327_11

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046327_11

3570189-3571311

Orphan

Consensus_repeat	Method
CAANNGGAGCAACNGGAGCAANNGG	CRT

22 spacers

The CRISPR arrays of NZ_CP046327_11

>merge|NZ_CP046327|11|3570189-3571311|CRT
CAACCGGAGCGACCGGAGCAAATGGAATAACAGGACCAACAGGAAATACGGGAGCAACCGGGGCGAATGGAATAACAGGACCAACAGGAAATATGGGAGCGACTGGAGCAAATGGAACAACAGGTTCTACAGGACCAACAGGAAATACAGGAGCGACTGGAGCAAATGGAATAACAGGTCCAACAGGAGCAACAGGAGCAACGGGAGCAAATGGAATAACAGGTCCAACCGGAAACAAGGGAGCAACGGGAGCGAATGGGATAACAGGTCCAACAGGAGCAACAGGAGCAACGGGAGCAAATGGAATAACAGGTCCAACAGGAAATACAGGAGCAACGGGAGCAAATGGTGCAACCGGACTAACCGGAGCAACTGGGGCAACGGGAGCGAATGGGATAACAGGTCCAACAGGAGCAACAGGAGCAACGGGAGCAAATGGAGTAACAGGTGCTACAGGCCCAACAGGAAATACAGGAGCAACAGGTCCAACCGGAAGTATAGGAGCAACGGGAGCAAATGGAGTAACAGGTGCCACAGGTCCAATAGGAGCAACAGGTCCAACCGGAGCAGTAGGAGCAACAGGTCCAGATGGTTTGGTAGGTCCAACAGGCCCAACAGGCCCAACCGGAGCAACCGGAGCAAATGGTTTGGTAGGTCCAACAGGCCCAACCGGAGCAACCGGAGCAAATGGTTTGGTAGGTCCAACAGGAGCGACCGGAGCAACAGGAGTAGCTGGGGCAATAGGTCCAACCGGAGCAGTAGGAGCGACAGGCCCAACGGGAGCAGATGGAGCAGTAGGTCCAACCGGAGCAACCGGAGCAACAGGGGCAAATGGAGCAACAGGCCCAACGGGAGCAGTAGGAGCAACTGGAGCGAATGGAGTAGCAGGTCCAATAGGTCCAACAGGTCCAACCGGAGCAAATGGAGTAGCAGGAGCAACAGGAGCGACCGGAGCAACAGGGGCAAATGGAGCAACAGGCCCAACAGGAGCAGTAGGAGCAACGGGAGCAAATGGAGTAGCAGGTCCAATAGGTCCAACAGGACCAACAGGAGCAAATGGAACGACCGGAGCAACAGGGGCGACCGGAGCAACGGGAGCAAATGGAGCAACAGGTCCAACAGG

>NZ_CP046327|11|8|3570189-3571311|CRT
CAACCGGAGCGACCGGAGCAAATGG	AATAACAGGACCAACAGGAA
ATACGGGAGCAACCGGGGCGAATGG	AATAACAGGACCAACAGGAA
ATATGGGAGCGACTGGAGCAAATGG	AACAACAGGTTCTACAGGACCAACAGGAA
ATACAGGAGCGACTGGAGCAAATGG	AATAACAGGTCCAACAGGAG
CAACAGGAGCAACGGGAGCAAATGG	AATAACAGGTCCAACCGGAA
ACAAGGGAGCAACGGGAGCGAATGG	GATAACAGGTCCAACAGGAG
CAACAGGAGCAACGGGAGCAAATGG	AATAACAGGTCCAACAGGAA
ATACAGGAGCAACGGGAGCAAATGG	TGCAACCGGACTAACCGGAG
CAACTGGGGCAACGGGAGCGAATGG	GATAACAGGTCCAACAGGAG
CAACAGGAGCAACGGGAGCAAATGG	AGTAACAGGTGCTACAGGCC
CAACAGGAAATACAGGAGCAACAGG	TCCAACCGGAAGTATAGGAGCAACGGGAGCAAATGGAGTAACAGGTG
CCACAGGTCCAATAGGAGCAACAGG	TCCAACCGGAGCAGTAGGAGCAACAGGTCCAGATGGTTTGGTAGGTC
CAACAGGCCCAACAGGCCCAACCGG	AGCAACCGGAGCAAATGGTTTGGTAGGTC
CAACAGGCCCAACCGGAGCAACCGG	AGCAAATGGTTTGGTAGGTC
CAACAGGAGCGACCGGAGCAACAGG	AGTAGCTGGGGCAATAGGTC
CAACCGGAGCAGTAGGAGCGACAGG	CCCAACGGGAGCAGATGGAGCAGTAGGTC
CAACCGGAGCAACCGGAGCAACAGG	GGCAAATGGAGCAACAGGCC
CAACGGGAGCAGTAGGAGCAACTGG	AGCGAATGGAGTAGCAGGTCCAATAGGTCCAACAGGTCCAACCGGAG
CAAATGGAGTAGCAGGAGCAACAGG	AGCGACCGGAGCAACAGGGG
CAAATGGAGCAACAGGCCCAACAGG	AGCAGTAGGAGCAACGGGAG
CAAATGGAGTAGCAGGTCCAATAGG	TCCAACAGGACCAACAGGAG
CAAATGGAACGACCGGAGCAACAGG	GGCGACCGGAGCAACGGGAG
CAAATGGAGCAACAGGTCCAACAGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046327.1\|WP_003422086.1\|3563739_3564375_+\|single-stranded-DNA-binding-protein	unknown	unknown	gnl\|CDD\|235616
NZ_CP046327.1\|WP_074014349.1\|3567563_3568847_+\|serine-dehydratase-subunit-alpha-family-protein	unknown	unknown	gnl\|CDD\|226206
NZ_CP046327.1\|WP_009891688.1\|3569174_3569714_+\|hypoxanthine-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|223707
NZ_CP046327.1\|WP_009891684.1\|3574769_3575486_-\|2,3,4,5-tetrahydropyridine-2,6-dicarboxylate-N-acetyltransferase	unknown	unknown	gnl\|CDD\|132571
NZ_CP046327.1\|WP_009891691.1\|3565339_3567115_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|226350
NZ_CP046327.1\|WP_003428092.1\|3559303_3560062_+\|proline-reductase-cluster-protein-PrdD	unknown	unknown	gnl\|CDD\|275275
NZ_CP046327.1\|WP_009893905.1\|3573509_3574499_+\|membrane-protein	unknown	unknown	gnl\|CDD\|259800
NZ_CP046327.1\|WP_003422094.1\|3560076_3560544_+\|D-proline-reductase	unknown	unknown	gnl\|CDD\|275273
NZ_CP046327.1\|WP_009891676.1\|3581558_3582677_+\|N-acetyldiaminopimelate-deacetylase	unknown	unknown	gnl\|CDD\|349920
NZ_CP046327.1\|WP_003438799.1\|3578955_3579837_-\|4-hydroxy-tetrahydrodipicolinate-synthase	unknown	unknown	gnl\|CDD\|235107
NZ_CP046327.1\|WP_003438792.1\|3582798_3583053_+\|small,-acid-soluble-spore-protein,-alpha/beta-type	unknown	unknown	gnl\|CDD\|365990
NZ_CP046327.1\|WP_003422063.1\|3576525_3577413_-\|4-hydroxy-tetrahydrodipicolinate-synthase	unknown	unknown	gnl\|CDD\|235107
NZ_CP046327.1\|WP_012816401.1\|3560561_3561044_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|275273
NZ_CP046327.1\|WP_003422084.1\|3564558_3565128_+\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|225136
NZ_CP046327.1\|WP_003422090.1\|3561063_3562071_+\|proline-racemase	unknown	unknown	gnl\|CDD\|184427
NZ_CP046327.1\|WP_021408848.1\|3572313_3573069_-\|4-hydroxy-tetrahydrodipicolinate-reductase	unknown	unknown	gnl\|CDD\|234595
NZ_CP046327.1\|WP_009891694.1\|3562190_3563072_+\|TSUP-family-transporter	unknown	unknown	gnl\|CDD\|376667
NZ_CP046327.1\|WP_003422058.1\|3580159_3581353_+\|L-serine-ammonia-lyase	unknown	unknown	gnl\|CDD\|273233
NZ_CP046327.1\|WP_009891682.1\|3575709_3576459_-\|4-hydroxy-tetrahydrodipicolinate-reductase	unknown	unknown	gnl\|CDD\|234595
NZ_CP046327.1\|WP_003422061.1\|3577529_3578531_-\|aspartate-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|237845

Protein	Function_ID	Function_description	E-value
NZ_CP046327.1\|WP_003422086.1\|3563739_3564375_+\|single-stranded-DNA-binding-protein	gnl\|CDD\|235616	PRK05813, PRK05813, single-stranded DNA-binding protein; Provisional.	1.92637e-126
NZ_CP046327.1\|WP_074014349.1\|3567563_3568847_+\|serine-dehydratase-subunit-alpha-family-protein	gnl\|CDD\|226206	COG3681, COG3681, L-cysteine desulfidase [Amino acid transport and metabolism].	5.02394e-105
NZ_CP046327.1\|WP_009891688.1\|3569174_3569714_+\|hypoxanthine-phosphoribosyltransferase	gnl\|CDD\|223707	COG0634, Hpt, Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism].	1.66629e-76
NZ_CP046327.1\|WP_009891684.1\|3574769_3575486_-\|2,3,4,5-tetrahydropyridine-2,6-dicarboxylate-N-acetyltransferase	gnl\|CDD\|132571	TIGR03532, DapD_Ac, 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase. This enzyme is part of the diaminopimelate pathway of lysine biosynthesis. Alternate name: tetrahydrodipicolinate N-acetyltransferase. Note that IUBMB lists this alternate name as the accepted name. Unfortunately, the related succinyl transferase acting on the same substrate (EC:2.3.1.117, TIGR00695) uses the opposite standard. We have decided to give these two enzymes names which more clearly indicated that they act on the same substrate.	1.11628e-110
NZ_CP046327.1\|WP_009891691.1\|3565339_3567115_+\|AAA-family-ATPase	gnl\|CDD\|226350	COG3829, RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms].	1.34571e-152
NZ_CP046327.1\|WP_003428092.1\|3559303_3560062_+\|proline-reductase-cluster-protein-PrdD	gnl\|CDD\|275275	TIGR04482, D_pro_red_PrdD, proline reductase cluster protein PrdD. Members of this family are PrdD, encoded in the proline reductase gene cluster. Members are closely homologous to PrdA, which cleaves during maturation to create two subunits of the subunits of the proline reductase complex, one of which has a Cys-derived pyruvoyl active site.	1.75038e-162
NZ_CP046327.1\|WP_009893905.1\|3573509_3574499_+\|membrane-protein	gnl\|CDD\|259800	cd03402, SPFH_like_u2, Uncharacterized family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily. This model summarizes an uncharacterized family of proteins similar to stomatin, prohibitin, flotillin, HflK/C (SPFH) and podocin. The conserved domain common to the SPFH superfamily has also been referred to as the Band 7 domain. Many superfamily members are associated with lipid rafts. Individual proteins of the SPFH superfamily may cluster to form membrane microdomains which may in turn recruit multiprotein complexes. Microdomains formed from flotillin proteins may in addition be dynamic units with their own regulatory functions. Flotillins have been implicated in signal transduction, vesicle trafficking, cytoskeleton rearrangement and are known to interact with a variety of proteins. Stomatin interacts with and regulates members of the degenerin/epithelia Na+ channel family in mechanosensory cells of Caenorhabditis elegans and vertebrate neurons and participates in trafficking of Glut1 glucose transporters. Prohibitin may act as a chaperone for the stabilization of mitochondrial proteins. Prokaryotic HflK/C plays a role in the decision between lysogenic and lytic cycle growth during lambda phage infection. Flotillins have been implicated in the progression of prion disease, in the pathogenesis of neurodegenerative diseases such as Parkinson's and Alzheimer's disease, and in cancer invasion and metastasis. Mutations in the podocin gene give rise to autosomal recessive steroid resistant nephritic syndrome.	1.53248e-127
NZ_CP046327.1\|WP_003422094.1\|3560076_3560544_+\|D-proline-reductase	gnl\|CDD\|275273	TIGR04480, D-proline_reductase_PrdA_proprotein, D-proline reductase (dithiol), PrdA proprotein. Members of this family are the PrdA proprotein. The polypeptide undergoes an autocatalytic cleavage that creates two subunits, one with a Cys-derived pyruvoyl motiety critical for activity. The D-proline reductase complex also contains a subunit derived from the prdB gene. The complex acts on D-proline, which may be supplied from L-proline by an active proline racemase encoded nearby.	6.50378e-55
NZ_CP046327.1\|WP_009891676.1\|3581558_3582677_+\|N-acetyldiaminopimelate-deacetylase	gnl\|CDD\|349920	cd05670, M20_Acy1_YkuR-like, M20 Peptidase aminoacyclase-1 YkuR-like proteins, including YkuR and Ama/HipO/HyuC proteins. Peptidase M20 family, aminoacyclase-1 YkuR-like subfamily including YkuR and Ama/HipO/HyuC proteins, most of which have not been well characterized to date. N-terminal acetylation of proteins is a widespread and highly conserved process that is involved in the protection and stability of proteins. Several types of aminoacylases can be distinguished on the basis of substrate specificity; substrates include indoleacetic acid (IAA) N-conjugates of amino acids, N-acetyl-L-amino acids and aminobenzoylglutamate. ACY1 breaks down cytosolic aliphatic N-acyl-alpha-amino acids (except L-aspartate), especially N-acetyl-methionine and acetyl-glutamate into L-amino acids and an acyl group. However, ACY1 can also catalyze the reverse reaction, the synthesis of acetylated amino acids. ACY1 may also play a role in xenobiotic bioactivation as well as in the inter-organ processing of amino acid-conjugated xenobiotic derivatives (S-substituted-N-acetyl-L-cysteine). ACY1 appears to physically interact with Sphingosine kinase type 1 (SphK1) and may influence its physiological functions; SphK1 and its product sphingosine-1-phosphate have been shown to promote cell growth and inhibit apoptosis of tumor cells. Strong expression of the human gene and its mouse ortholog Acy1 in brain, liver, and kidney suggest a role of the enzyme in amino acid metabolism of these organs.	0
NZ_CP046327.1\|WP_003438799.1\|3578955_3579837_-\|4-hydroxy-tetrahydrodipicolinate-synthase	gnl\|CDD\|235107	PRK03170, PRK03170, dihydrodipicolinate synthase; Provisional.	2.59498e-154
NZ_CP046327.1\|WP_003438792.1\|3582798_3583053_+\|small,-acid-soluble-spore-protein,-alpha/beta-type	gnl\|CDD\|365990	pfam00269, SASP, Small, acid-soluble spore proteins, alpha/beta type.	4.48108e-06
NZ_CP046327.1\|WP_003422063.1\|3576525_3577413_-\|4-hydroxy-tetrahydrodipicolinate-synthase	gnl\|CDD\|235107	PRK03170, PRK03170, dihydrodipicolinate synthase; Provisional.	6.4792e-159
NZ_CP046327.1\|WP_012816401.1\|3560561_3561044_+\|hypothetical-protein	gnl\|CDD\|275273	TIGR04480, D-proline_reductase_PrdA_proprotein, D-proline reductase (dithiol), PrdA proprotein. Members of this family are the PrdA proprotein. The polypeptide undergoes an autocatalytic cleavage that creates two subunits, one with a Cys-derived pyruvoyl motiety critical for activity. The D-proline reductase complex also contains a subunit derived from the prdB gene. The complex acts on D-proline, which may be supplied from L-proline by an active proline racemase encoded nearby.	1.9724e-32
NZ_CP046327.1\|WP_003422084.1\|3564558_3565128_+\|methyltransferase-domain-containing-protein	gnl\|CDD\|225136	COG2226, UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism].	4.46184e-05
NZ_CP046327.1\|WP_003422090.1\|3561063_3562071_+\|proline-racemase	gnl\|CDD\|184427	PRK13969, PRK13969, proline racemase; Provisional.	0
NZ_CP046327.1\|WP_021408848.1\|3572313_3573069_-\|4-hydroxy-tetrahydrodipicolinate-reductase	gnl\|CDD\|234595	PRK00048, PRK00048, dihydrodipicolinate reductase; Provisional.	3.21083e-106
NZ_CP046327.1\|WP_009891694.1\|3562190_3563072_+\|TSUP-family-transporter	gnl\|CDD\|376667	pfam01925, TauE, Sulfite exporter TauE/SafE. This is a family of integral membrane proteins where the alignment appears to contain two duplicated modules of three transmembrane helices. The proteins are involved in the transport of anions across the cytoplasmic membrane during taurine metabolism as an exporter of sulfoacetate. This family used to be known as DUF81.	3.87293e-08
NZ_CP046327.1\|WP_003422058.1\|3580159_3581353_+\|L-serine-ammonia-lyase	gnl\|CDD\|273233	TIGR00720, hypothetical_protein_NEICINOT_00681, L-serine dehydratase, iron-sulfur-dependent, single chain form. This enzyme is also called serine deaminase and L-serine dehydratase 1. L-serine ammonia-lyase converts serine into pyruvate in the gluconeogenesis pathway from serine. This enzyme is comprised of a single chain in Escherichia coli, Mycobacterium tuberculosis, and several other species, but has separate alpha and beta chains in Bacillus subtilis and related species. The beta and alpha chains are homologous to the N-terminal and C-terminal regions, respectively, but are rather deeply branched in a UPGMA tree. This enzyme requires iron and dithiothreitol for activation in vitro, and is a predicted 4Fe-4S protein. Escherichia coli Pseudomonas aeruginosa have two copies of this protein. [Energy metabolism, Amino acids and amines, Energy metabolism, Glycolysis/gluconeogenesis].	6.67523e-139
NZ_CP046327.1\|WP_009891682.1\|3575709_3576459_-\|4-hydroxy-tetrahydrodipicolinate-reductase	gnl\|CDD\|234595	PRK00048, PRK00048, dihydrodipicolinate reductase; Provisional.	4.63843e-105
NZ_CP046327.1\|WP_003422061.1\|3577529_3578531_-\|aspartate-semialdehyde-dehydrogenase	gnl\|CDD\|237845	PRK14874, PRK14874, aspartate-semialdehyde dehydrogenase; Provisional.	0

>NZ_CP046327.1|WP_009891688.1|3569174_3569714_+|hypoxanthine-phosphoribosyltransferase
MDIETKKWEVLYSEEKIKDKLRELGAIIEKDYKDKNLMVVSLLKGSFIFCADLVRNINLPLRVNFMTTSSYGNNEESTGKVKVVSDVTTDIAGYDVLVVDDITDSALTMDFVLKHLKAKNPASLKCCVLLDKPSRRKVDLVPDYCGFEIEDKFVVGYGFDFGDYYRNVPYIFNVTDEDR
>NZ_CP046327.1|WP_074014349.1|3567563_3568847_+|serine-dehydratase-subunit-alpha-family-protein
MEMLKAEVKPAVGCTEPVALALACAKAKELLGEEIVENRMLVSPSIYKNGMCVGIPGTERLGLKIAAALGIVGGHSENGLSVLETLTKEEVKIAEDYMDNTPLSITPADTREKVFIEVVLKGKNHIAKVRIRTKHDNFTFLEKDGEVLLDNEPKVSASNDAAEKAESLMDTVTIQELIKNVEEIDFKDIEFLLDGVKMNEEMAEYGLKQKTGIGVGYGIKKSIEEGLLGNDVINYAMMLTAGASDARMAGVKMPVMSSNGSGNHGLTAILPIVAYNKKFPQSDEKLAKALAISHLVTGYIKNYTGRLSAVCGCGVAASTGATAGISWLMNGTEKQIEGAIENMIADLSGMICDGAKAGCALKLSSAASAAIQSAIIAKQDCFVPPLNGIVGSSVEQSIQNLGRVSDKGMSITDEIILNVMNDMNKVD
>NZ_CP046327.1|WP_009891691.1|3565339_3567115_+|AAA-family-ATPase
MMVMIGLEYIKSDIQNIAEAIVSVLNIDVTIVNKELFRIAGTGVYIDKIGEKVDKYTAFKKSLTEQITILIDDPKSSDVCRECYKSGACVEFAEVCCPIICDGDSHGVIGLIAFTKEQAQIIENNKSGLINFLGKMADLISNKLKAQIKTYELELEKKKLETLLNNMDKAVVSIDVDGKIDKYNSKFKELFNIKDSITGKNIFVELDFIKKPSINNFKKDKSCSFFYKRYGYDSKGIYNINKIVLKNELKGYVIDFIDKRDAIKNYNKMNKDYRIKLENIIGESVAIRNSKKEALIASKSTSTVLITGESGTGKELFARAIHNHSNRVDNPFIAVNCAAIPDNLLESELFGYEEGAFTGAKKGGKLGMFEVAHKGSIFLDEIGDMSLHLQSKLLRVLQEKELNKIGSKSNVSIDVRIIAATNKDLEKMVQNGTFREDLYYRLNVIPIKLPSLRERKEDIPLIIKHMVKEYSKKLDKNVIDIDSRVVDAMMEYKWPGNIRELQNIIEYSVNMSSSSIITMNVIPQKIKNTSVEELEVKSDRIIPLDELEKIEIIKALNKYKDYKKDKELTAKALGISRATLYRKIEKYNIIS
>NZ_CP046327.1|WP_003422084.1|3564558_3565128_+|methyltransferase-domain-containing-protein
MKSILCQINKQPVKAKYTSDELECFLDTIEYNVGDKILLVGHIGNLGKRLRGLGTSVTILENSNYEDVCYSLVYNENCNVVKGKLEFLPFDDNQFNKIIIVDQFNVITDCEKASSEIQRVLKGNGEVILEDLNLKNLKVKLNYLKHKFCGSVAKIHYPHEVFNIFSRLNFDGMIKESNKLKYIYVGKRR
>NZ_CP046327.1|WP_003422086.1|3563739_3564375_+|single-stranded-DNA-binding-protein
MIAVKDENNVVNLRGELDNKLEFSHEIFGEKFYNMKIKINRLSDSFDILPMTVSERLLQDIDLDKQNLVNVVGQLRSYNKTLNNKNRLVLTVFVREIKSIDEENKDPNSIFLDGYVCKEPVYRKTPLGREITDLLVAINRPYNKSDYIPSIVWGRNAKFAKNLKVGDRIQLWGRVQSREYEKKIDENNVVKKMAYEVSISKIKKLDENNNE
>NZ_CP046327.1|WP_009891694.1|3562190_3563072_+|TSUP-family-transporter
MVAILKALYVVFAAIFAVVFGKDVAKANKEGKLEEQSTPKVAVTGFITDFFDTLGIGSFAPTIAMSKALKLNIPDKKMPGTLNVAHTIPVVTEAFIFTSIIPVDGVTLVSMVVAAAVGSYIGAGIIAKMDERKIQLVMGVTLALTAILMLLGHPWINVLPGGGNELGLTGVKLVIGVIGNFILGALMTAGIGLYAPGMAMVYFLGMSAKVAFPIVMGSCALLMPVASMKFIKEDAYTKKASVIIAICGLIGVFVAAYIVKTLPMDILKALVIVVIAYTSATMIMAANKNKKTA
>NZ_CP046327.1|WP_003422090.1|3561063_3562071_+|proline-racemase
MKFSRSIQAIDSHTAGEATRIVVGGIPNIKGNSMPEKKEYLEENLDYLRTAIMLEPRGHNDMFGSVMTQPCCPDADFGIIFMDGGGYLNMCGHGTIGAMTAAIETGVVPAVEPVTHVVMEAPAGIIRGDVTVVDGKAKEVSFLNVPAFLYKEGVEVDLPGVGTVKFDISFGGSFFAIIHASQLGLKIEPQNAGKLTELAMKLRDIINEKIEIQHPTLAHIKTVDLVEIYDEPTHPEATYKNVVIFGQGQVDRSPCGTGTSAKLATLHAKGELKVGEKFVYESILGTLFKGEIVEETKVADFNAVVPKITGSAYITGFNHFVIDEEDPLKHGFILK
>NZ_CP046327.1|WP_012816401.1|3560561_3561044_+|hypothetical-protein
MSFVGISTSMKNTSLHIFRDPLLDLIDNDSDIDLLGVVVVGTSEHNEWKTFLATRLGRWIESLRPDGVIITLDMAGNQHIDFTNAIAEFVKSDIPAVGLTIMGADGLVITNPYLDKATIIDYKKTTGYIETEVVGDNHMDEVDVKKALAFLKLKMRKDAK
>NZ_CP046327.1|WP_003422094.1|3560076_3560544_+|D-proline-reductase
MGIGPSTKETSLHHFRDPLLDIVESDKDVDLLGVIVVGTPDGNENKTFVGQRTAAWLEAMRVDGAIVSSDGWGNSHVDYANTFEEIGKRDIPVVGVTFNGTQAKFVVSNQYMDTIVDMNKSKEGIETEVVGENNTNEIDAKKALAFLKLKMRKHG
>NZ_CP046327.1|WP_003428092.1|3559303_3560062_+|proline-reductase-cluster-protein-PrdD
MEEKIMRRLVIKPFHMNEVNFGSKTSIKKDVLTIDLSSIDEIKEREELITDIKVDIIKPGDYDREINTIMDIIPISTKVLGRLGEGITHTLTGVYVMLTGADEDGNQMHEFGSSEGILKDQMVFGRYGTPSVEDYIIHVDVTLKGGLPFERTLPLAAFRACDDFIQEIRASLKMEDGRNATQVREYFDKIRPNAKKVVIVKQIAGQGAMYDNQLFSKEPSGFEGGTSIIDMGNVPMIISPNEYRDGALRAMT
>NZ_CP046327.1|WP_021408848.1|3572313_3573069_-|4-hydroxy-tetrahydrodipicolinate-reductase
MLKVIINGYNGTMGRVLAECVKKDNELELVCGVARSADEKGHHSDTKLYKTMTDVTEKTDVIIDFSHHETLEPILSYALKNNTPVVLATTGYDENDLNKIEEASKNIPILLSSNTSLGVNILIKLVKDASKMLEGFDIEIIEKHHNRKEDAPSGTATMIANAIREVLPESENTHGRYGRDCKRKPNEIGIHSIRGGNIISDHDVIFAGDNEVLTLSHHSQSDEVFANGSIVAAKFLIGKQSGLYKMSDILG
>NZ_CP046327.1|WP_009893905.1|3573509_3574499_+|membrane-protein
MLKEEKTYQEKDAKVFNGVAALIMIVLFLVVSIGIMVFGIVKLDSGFTGIGSLMLILGLVFIVVDFILFFGLKMINPKEAIVLVLFGNYYGTIKKEGYYWVNPFCSAINPAVSRINVSKSSSDEKVDISTNSRGKKVSLKTMTLNNEKQKVNDLLGNPIIIGVVVIWKVINATKAVFNVDNYNTFLSIQCDSTIRNVSRLYPYDVSEDGDEKSLRGSSQEIADRLKDELQSRVDIAGIEVCEVRITHLSYAPEIAAAMLQRQQAEAIIAARKKIVEGAVSMVEMALTNLSENNVVTLDEERKAAMVSNLLVVLCGNKDAQPVVNSSSIY
>NZ_CP046327.1|WP_009891684.1|3574769_3575486_-|2,3,4,5-tetrahydropyridine-2,6-dicarboxylate-N-acetyltransferase
MVNLNDAYEIARYIKEVKKKTPVKVYVNTNSLHFQSTDKFKVFGSNGSYIFVGDYEDIMEVLDKHGNDITDTHVEYDRRNSAIPLKNTLNEHARIEPGAIIRDMVTIEKNAVVMMGAVINIGAVIGEGSMVDMNAVIGARGTLGKNVHLGAGAVVAGVLEPPSATPVIVEDDVLIGANAVILEGVRIGKGAVVAAGAVVTTDVEAGAVVAGSPAKVIKMKDEKTADKTKLMEDLRNLD
>NZ_CP046327.1|WP_009891682.1|3575709_3576459_-|4-hydroxy-tetrahydrodipicolinate-reductase
MLKVIATGYDGKMGKILADTIREDNELELVCVAARGLDSYEGDLKIYEDMSTIVEEADVVIDFSHHSNLDNILSYVLKTKTPLVIATTGYNDNEMNKIREAAKVIPVFQSYNMSLGVNVLVKLVKDAAKLLEGFDIEIIEKHHNRKVDAPSGTAVMIANAIKEVLPNVENNYGRYGRSAKRQPNEVGIHAIRGGNIVGEHDALFAGDNEVLTISHQAQSRGIFASGSIAAAKYLVKQKPGFYNMDSMLG
>NZ_CP046327.1|WP_003422063.1|3576525_3577413_-|4-hydroxy-tetrahydrodipicolinate-synthase
MIFKGSAVALVTPFTKDNKVDFDKLGELVEYQIANGTDAIVSCGTTGEANTMTDEEQLATIKYVVEKVNKRVPVIAGSGSNDTMHSVNLSQEAEKLGVDALLIITPYYNKANKAGLKRHFETIANSVKLPIILYNVPGRTCVNISPSLIVELAKIDNIVAVKEASGDLGQVAEIASLVPDDFAIYSGNDDTILPLLSLGGQGVISVLANVCPQETHDLVAKFFEGDIEGSRKLQLGMDALIAALFIEVNPIPVKTAMNLLGFNVGDLRLPLAEMDPANLEVLKKELVNFGLKVNA
>NZ_CP046327.1|WP_003422061.1|3577529_3578531_-|aspartate-semialdehyde-dehydrogenase
MKKVNVAIVGATGMVGRTFLKVLEERNFPIENLFLFSSSKSAGSKVMFCGKEYIVEELKETSFTDRGIQIALFSAGGSISEKYAPIAASNGILVVDNSSQWRMNPDVPLVVPEVNPEAIKNHKGIIANPNCSTIQAMVPLKALDDKYKIKRVVYSTYQAVSGSGVKGVEDLEKGMNGNPTGFYPHQISYNCLPHIDSFTENGYTKEEMKMVNETMKILDNYDLKITATTVRVPVKNGHSESINVEFNNPFELDDLVKTLEEAPGVVVVDNPAKNEYPTAVEFDDRDEVFVGRIRRDFSVDNGVNLWVVADNIRKGAATNAIQIAEMALSYDLV
>NZ_CP046327.1|WP_003438799.1|3578955_3579837_-|4-hydroxy-tetrahydrodipicolinate-synthase
MLFKGSAVALVTPFTEDNNVNFEKLGELIEYHIENGTDALVVCGTTGEATTMSESEIFAVIKYTVEKVNKRIPVIAGTGSNNTMLSVHMSQEAEKLGVDGLLIITPYYNKTNEKGLKLHFETIANSVKLPIILYNVPGRTKVNIKPSVVAELAKIDNIVAVKEASGDLAQVAEIAKLVPKDFAIYSGNDDTILPLLSLGGSGVISVLANICPKETHDLVTKFFEGDIEGSKKLQLDMDALIAALFIEVNPVPVKTAMNILGFNVGDLRLPLAEMEETNLNVLKQELTNFGFKF
>NZ_CP046327.1|WP_003422058.1|3580159_3581353_+|L-serine-ammonia-lyase
MDTLKELFKIGSGPSSSHTMGPQRAAERFKNENPDAESFRAILYGSLAATGKGHLTDYIIEKTIAPKKVEIVWEEDIIKDFHPNGMKFEALDKDKNVTAEWTVYSVGGGTIAEEGQRNSKSNSIYHLDTMDEIVKWCKENNKTLVDFVLECEPKDIKDYIKTIKDAMRKSIDDGLSTDEIIPGKLLLKRRASTFYNAYKKDKSFSTLVYAYALAASEQNASGNIIVTAPTCGSAGVIPGIFFAMQDFYNYDDEKIIEALLVAGIIGNIIKTNASISGAEVGCQGEVGAACSMAAAAVAYLKGGTIDHIEYAAEIALEHHLGMTCDPVYGYVQIPCIERNAMAAQRAYDAANYALLTDGSHSVSLDQVVETMKETGIDMMDKYKETAKGGLAKHFFSC
>NZ_CP046327.1|WP_009891676.1|3581558_3582677_+|N-acetyldiaminopimelate-deacetylase
MREASYLQEQLYKHRKSLNPIAEIGRKEYKTSKYIRDYLDKLGIEYEVYLETGIVGVIEGKRPKKDIAFRADIDGLHSEEGVKHLCGHDGHATILLGLIEYLNDNKEDLNDNIVFIFQPAEEGPGGAKALIDEGVLRKYNIDEIYGLHIYPELPEGYVGTREGYFMAQIGDIDIEIVSKSGHGAMPQNGIDGIVIASNFVSSLQTIVSRNISPIDNAVLTIGRIEGGARRNIIAENIKMEGTMRCFSPEVYEKMKLRVRELARGFELAYNCKVNINIIDDYIAVKNDKDLYQEFVEAIGSDTVVELEPLMISEDFSYYQKEVPGLFFMLGSRNEEKGFVNGLHNINFNFDEKICVNALNVYSKLLKYKEAID
>NZ_CP046327.1|WP_003438792.1|3582798_3583053_+|small,-acid-soluble-spore-protein,-alpha/beta-type
MIFLKEKVQREKKITNGKNTKILTNDDIMKYEIASELGLMDKVGERGWAGLTAKEAGRIGGMLTSRKKRLKKIVEEQNKKDESI

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Crispr_ID: NZ_CP046327_12

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046327_12

3688414-3689036

Unclear

Consensus_repeat	Method
ATTTATAACTAACTTAGTGTAATTTAAAC	PILER-CR
GTTTAAATTACACTAAGTTAGTTATAAAT	CRISPRCasFinder
GTTTAAATTACACTAAGTTAGTTATAAAT	CRT

9 spacers

cas3,cas7,cas6,cas5

The CRISPR arrays of NZ_CP046327_12

>merge|NZ_CP046327|12|3688414-3689036|PILER-CR,CRISPRCasFinder,CRT
GTTTAAATTACACTAAGTTAGTTATAAATATTCCGGAAAGTACTTTTGCTATTTGATTCATTCTACCCGTTTAAATTACACTAAGTTAGTTATAAATTTCACTAATTTTAGTTACAACTATTACAAGTCCAGCCGTTTAAATTACACTAAGTTAGTTATAAATTATGTGTAATGTATTTTAATGTTTTCTAGCAACAATGTTTAAATTACACTAAATTAGTTATAAATTTTATAAATTCTATGAATAATTTTAAAGAGAGGTTTCGTTTAAATTACACTAAGTTAGTTATAAATTGTACATTTGACATAGAAGCTTCAAAATCCATCCCAGTTTAAATTACACTAAGTTAGTTATAAATGTAACAGCACGAATGATGGCACAGACCTATCTGCAATGTTTAAATTACACTAAGTTAGTTATAAATAGAAGTACACTTACAAGTAAGATAAAAGACCCAGGTACAGTTTAAATTACACTAAGTTAGTTATAAATTCTGTAGCTATATGTGGAAGTAATTTTAGTAGAGAGGTTTAAATTACACTAAGTTAGTTATAAATTATTGAAGGGGTGAGAGTTGTGACTAGGCACTACAAGTTTAGATTACACTAAATTAGTTGTAAAT

>NZ_CP046327|12|8|3688414-3688971|PILER-CR
GTTTAAATTACACTAAGTTAGTTATAAAT	ATTCCGGAAAGTACTTTTGCTATTTGATTCATTCTACCC
GTTTAAATTACACTAAGTTAGTTATAAAT	TTCACTAATTTTAGTTACAACTATTACAAGTCCAGCC
GTTTAAATTACACTAAGTTAGTTATAAAT	TATGTGTAATGTATTTTAATGTTTTCTAGCAACAAT
GTTTAAATTACACTAAATTAGTTATAAAT	TTTATAAATTCTATGAATAATTTTAAAGAGAGGTTTC
GTTTAAATTACACTAAGTTAGTTATAAAT	TGTACATTTGACATAGAAGCTTCAAAATCCATCCCA
GTTTAAATTACACTAAGTTAGTTATAAAT	GTAACAGCACGAATGATGGCACAGACCTATCTGCAAT
GTTTAAATTACACTAAGTTAGTTATAAAT	AGAAGTACACTTACAAGTAAGATAAAAGACCCAGGTACA
GTTTAAATTACACTAAGTTAGTTATAAAT	TCTGTAGCTATATGTGGAAGTAATTTTAGTAGAGAG
GTTTAAATTACACTAAGTTAGTTATAAAT

>NZ_CP046327|12|11|3688414-3689036|CRISPRCasFinder
GTTTAAATTACACTAAGTTAGTTATAAAT	ATTCCGGAAAGTACTTTTGCTATTTGATTCATTCTACCC
GTTTAAATTACACTAAGTTAGTTATAAAT	TTCACTAATTTTAGTTACAACTATTACAAGTCCAGCC
GTTTAAATTACACTAAGTTAGTTATAAAT	TATGTGTAATGTATTTTAATGTTTTCTAGCAACAAT
GTTTAAATTACACTAAATTAGTTATAAAT	TTTATAAATTCTATGAATAATTTTAAAGAGAGGTTTC
GTTTAAATTACACTAAGTTAGTTATAAAT	TGTACATTTGACATAGAAGCTTCAAAATCCATCCCA
GTTTAAATTACACTAAGTTAGTTATAAAT	GTAACAGCACGAATGATGGCACAGACCTATCTGCAAT
GTTTAAATTACACTAAGTTAGTTATAAAT	AGAAGTACACTTACAAGTAAGATAAAAGACCCAGGTACA
GTTTAAATTACACTAAGTTAGTTATAAAT	TCTGTAGCTATATGTGGAAGTAATTTTAGTAGAGAG
GTTTAAATTACACTAAGTTAGTTATAAAT	TATTGAAGGGGTGAGAGTTGTGACTAGGCACTACAA
GTTTAGATTACACTAAATTAGTTGTAAAT

>NZ_CP046327|12|9|3688414-3689036|CRT
GTTTAAATTACACTAAGTTAGTTATAAAT	ATTCCGGAAAGTACTTTTGCTATTTGATTCATTCTACCC
GTTTAAATTACACTAAGTTAGTTATAAAT	TTCACTAATTTTAGTTACAACTATTACAAGTCCAGCC
GTTTAAATTACACTAAGTTAGTTATAAAT	TATGTGTAATGTATTTTAATGTTTTCTAGCAACAAT
GTTTAAATTACACTAAATTAGTTATAAAT	TTTATAAATTCTATGAATAATTTTAAAGAGAGGTTTC
GTTTAAATTACACTAAGTTAGTTATAAAT	TGTACATTTGACATAGAAGCTTCAAAATCCATCCCA
GTTTAAATTACACTAAGTTAGTTATAAAT	GTAACAGCACGAATGATGGCACAGACCTATCTGCAAT
GTTTAAATTACACTAAGTTAGTTATAAAT	AGAAGTACACTTACAAGTAAGATAAAAGACCCAGGTACA
GTTTAAATTACACTAAGTTAGTTATAAAT	TCTGTAGCTATATGTGGAAGTAATTTTAGTAGAGAG
GTTTAAATTACACTAAGTTAGTTATAAAT	TATTGAAGGGGTGAGAGTTGTGACTAGGCACTACAA
GTTTAGATTACACTAAATTAGTTGTAAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046327.1\|WP_021397364.1\|3691510_3691681_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046327.1\|WP_009891533.1\|3683141_3683906_+\|CRISPR-associated-endoribonuclease-Cas6	cas6	COG1583_cas6_CAS-I:CAS-III:CAS-IV	gnl\|CDD\|224499
NZ_CP046327.1\|WP_009891519.1\|3693428_3694721_+\|DUF262-domain-containing-protein	unknown	unknown	gnl\|CDD\|377008
NZ_CP046327.1\|WP_012816386.1\|3678005_3678755_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046327.1\|WP_009893841.1\|3683907_3685074_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046327.1\|WP_071587382.1\|3678767_3680102_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|273206
NZ_CP046327.1\|WP_009891530.1\|3685094_3686165_+\|DNA-repair-protein	cas7	cd09687_cas7_CAS-I-B	gnl\|CDD\|274215
NZ_CP046327.1\|WP_009891534.1\|3682503_3683151_+\|CRISPR-associated-protein-Cas5	cas5	cd09658_cas5_CAS-I-B	gnl\|CDD\|273860
NZ_CP046327.1\|WP_009891514.1\|3699099_3699828_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046327.1\|WP_021397354.1\|3694947_3695133_-\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|372570
NZ_CP046327.1\|WP_009891517.1\|3695653_3695881_-\|transposase	unknown	unknown	unknown
NZ_CP046327.1\|WP_009891513.1\|3699814_3704170_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274008
NZ_CP046327.1\|WP_009891516.1\|3696452_3697463_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|370769
NZ_CP046327.1\|WP_009891535.1\|3680351_3680624_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046327.1\|WP_012816385.1\|3692214_3693429_+\|FRG-domain-containing-protein	unknown	unknown	gnl\|CDD\|378073
NZ_CP046327.1\|WP_021397345.1\|3695162_3695552_-\|DDE-type-integrase/transposase/recombinase	unknown	unknown	gnl\|CDD\|222853
NZ_CP046327.1\|WP_009893844.1\|3680896_3682024_+\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|225724
NZ_CP046327.1\|WP_009891515.1\|3697462_3699082_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046327.1\|WP_003433761.1\|3677675_3677990_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046327.1\|WP_009891526.1\|3686175_3688161_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|273707

Protein	Function_ID	Function_description	E-value
NZ_CP046327.1\|WP_009891533.1\|3683141_3683906_+\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|224499	COG1583, COG1583, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	4.96707e-25
NZ_CP046327.1\|WP_009891519.1\|3693428_3694721_+\|DUF262-domain-containing-protein	gnl\|CDD\|377008	pfam03235, DUF262, Protein of unknown function DUF262.	2.41897e-07
NZ_CP046327.1\|WP_009891516.1\|3696452_3697463_+\|hypothetical-protein	gnl\|CDD\|370769	pfam09983, DUF2220, Uncharacterized protein conserved in bacteria C-term(DUF2220). This domain, found in various hypothetical bacterial proteins, has no known function. The family represents just the C-terminus.	3.30625e-07
NZ_CP046327.1\|WP_071587382.1\|3678767_3680102_+\|AAA-family-ATPase	gnl\|CDD\|273206	TIGR00665, DnaB, replicative DNA helicase. This model describes the helicase DnaB, a homohexameric protein required for DNA replication. The homohexamer can form a ring around a single strand of DNA near a replication fork. An intein of > 400 residues is found at a conserved location in DnaB of Synechocystis PCC6803, Rhodothermus marinus (both experimentally confirmed), and Mycobacterium tuberculosis. The intein removes itself by a self-splicing reaction. The seed alignment contains inteins so that the model built from the seed alignment will model a low cost at common intein insertion sites. [DNA metabolism, DNA replication, recombination, and repair].	1.15036e-82
NZ_CP046327.1\|WP_009891530.1\|3685094_3686165_+\|DNA-repair-protein	gnl\|CDD\|274215	TIGR02585, conserved_protein, CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This clade is a member of the DevR family (TIGR01875) and includes the DevR protein of Myxococcus xanthus, a protein whose expression appears to be regulated through a number of means, including both location and autorepression; DevR mutants are incapable of fruiting body development.	6.81162e-13
NZ_CP046327.1\|WP_009891534.1\|3682503_3683151_+\|CRISPR-associated-protein-Cas5	gnl\|CDD\|273860	TIGR01895, conserved_hypothetical_protein, CRISPR-associated protein Cas5, subtype I-B/TNEAP. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This family is represented by TM1800 from Thermotoga maritima. It is related to TIGR01868 (CRISPR-associated protein, CT1976 family).	3.817e-14
NZ_CP046327.1\|WP_021397354.1\|3694947_3695133_-\|IS3-family-transposase	gnl\|CDD\|372570	pfam13333, rve_2, Integrase core domain.	2.15638e-09
NZ_CP046327.1\|WP_009891513.1\|3699814_3704170_+\|hypothetical-protein	gnl\|CDD\|274008	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins].	2.51998e-09
NZ_CP046327.1\|WP_012816385.1\|3692214_3693429_+\|FRG-domain-containing-protein	gnl\|CDD\|378073	pfam08867, FRG, FRG domain. This presumed domain contains a conserved N-terminal (F/Y)RG motif. It is functionally uncharacterized.	2.31841e-17
NZ_CP046327.1\|WP_009891526.1\|3686175_3688161_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|273707	TIGR01587, CRISPR-associated_endonuclease/helicase_Cas3, CRISPR-associated helicase Cas3. This model represents the highly conserved core region of an alignment of Cas3, a protein found in association with CRISPR repeat elements in a broad range of bacteria and archaea. Cas3 appears to be a helicase, with regions found by pfam00270 (DEAD/DEAH box helicase) and pfam00271 (Helicase conserved C-terminal domain). Some but not all members have an N-terminal HD domain region (pfam01966) that is not included within this model.	5.04928e-56
NZ_CP046327.1\|WP_009893844.1\|3680896_3682024_+\|HNH-endonuclease	gnl\|CDD\|225724	COG3183, COG3183, Predicted restriction endonuclease [Defense mechanisms].	2.22343e-44
NZ_CP046327.1\|WP_021397345.1\|3695162_3695552_-\|DDE-type-integrase/transposase/recombinase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	1.64393e-16

>NZ_CP046327.1|WP_009891526.1|3686175_3688161_+|CRISPR-associated-helicase/endonuclease-Cas3
MNNLYEYKAKSDGTSIDKHNEDMNYIMNQLVSIYNISNDMKNDLYEAIVCHDVGKVVKSFQDNIESSTRRVRHELLSASIKYLNRGQKLAILTHHKDIKFLEGQITNSIYEIELKELKELLDIEVEDIRPFIKEISRARNDDTRKLENILLKGYLQYCDHIASAGIKSIDKGFNSIKDFSIPKGVSYNSIQEKVLNMDKNEDIMIMAMTGLGKTATSLYWSNLVQNEYKSKRVYYILPYTASINSLYENLYNRNISVSMLHSKAPYFLNKISDEEDIKQLYQIYKKSVKQINVCTIFQLVKSVFSCKRFEMLLSQLKDSIFIVDEIHCFDTRVLCYTLEFLKYLKENLNVKICIMSASIPTCLKKLIQERLQISTIIEPDSKDLIFRHRLNRLSEGILDSIHKIENDLMQGKRVLICVNSVDLSQELYGRLQKYNPKLIHGRFNTRDREQAEKGIEESFLLIGTQSIEVSLDISYDVLYTELAPLDSLLQRFGRVNRRGDNAELSNIYIYDYDRKLNIYDEDIINRTDIVISDIIHNDNSIVDESKVPSYLDNVYLDIDMDKYNKHKVALEIIMKNMRLGVWNKSANNDMLNNDTISVVPECLLEEYKLYIDKKMYLEASSLFVNVSVKRYNYNKKMFYECGDIVVTSYSYNDKLGLIFDC
>NZ_CP046327.1|WP_009891530.1|3685094_3686165_+|DNA-repair-protein
MENKNSNRMLNIGYAIEVLCGRLNGSSSEVEKKNNSYKNSTYTKKIGSRSRISSQCQKYNQKLFMEQVCGYEQNVKTKDGKQVKLVPNPFKYATDDIFGFMMAEKLSIEEDVYKELSDEEKEIYKKNKKKYEVNITKKRKSRWQMNSLINVSNRKVEWEWNVCGTTGDSMPYQVEVYSGVHTNIANLNIGKIGEYDISDIASEHRDYTTLEAKSIGVEKLDKEEKFKRIEALLKSLEYLSVEGNKTNHLTDTKPKFVILGEYSWGNNVFQGIIKENGLDVEMLKESIEQNEEFRKSDIWIGINKFYDDTFNEIEVNNEKEQIKKYLEEEFEEYDFMKISNVHQAFESYLKYLKETL
>NZ_CP046327.1|WP_009893841.1|3683907_3685074_+|hypothetical-protein
MDRSYNVFVDNGLYVLAYYLNKDINDITYQDIENSIDLMSDKIEEFVSCEKYSNLKSMCFSNSTLTQPKGKVTLNEKLKGFVKNQGDEYCSLCGQYKAKVKIEDKEYNIGRSYMPNLVANTFYNFSNNLQGLNVCPYCLVLTMYSILNCRVSRYAFLYNSTSSEFMEDYTFHIQKENLTDVELGAKKEKEKYSIVKLLESLVCKYNLFNGDIEQYMFNNSGQSQDIQVNRIKNKYVNLLIKLQEKALLSNFEKLHLDRYILNGTLESNYLREVYRVKKEEKMDEKEQKNFDELVIFLNREVNVLKKVKIDIIKKLTDKLKTSDLDIDKIYKELKMLGKFYAYEDWLVNLNEMYYEKTGEKLFEAEDYIELDDIRSFRQIKNLILVSLI
>NZ_CP046327.1|WP_009891533.1|3683141_3683906_+|CRISPR-associated-endoribonuclease-Cas6
MHLVRRHLILTVDNEVVLDYNYQYELMKRIYEAIEINDKRKALSLHNEGYKVDKKVFKLFNYTIMFENAKYLKEGIHLNPQTKIKLILSGYDDILNNIIKGFIKCKVFKLNNIEFKVSDIEEDSKKNFNNITLYKVRSPIVASLYDLKSRKQVYLNPMQEEFYKALHDNLGNKYKLIHNKEYTGELYFDIEDVLAVKKKYITNIKGKGFIIGYTDFEIFVQANKDMQEVIYYCGLGEKNSIGMGLLTYITSRRA
>NZ_CP046327.1|WP_009891534.1|3682503_3683151_+|CRISPR-associated-protein-Cas5
MILNKIEIIGDMAHFKIPMHSKIQRTYEIPPISTVVGILKNIYGEEIDDFILGYVIYHDGTFKDLQTIYKEINPNVKTLTDSDRFQTDVCPIEYLINPKLIIYTNIDKNIEFNEPLCLGKTNCLAKVLSLSEIEVNLIDKKAIGYNQYTDINIGDGMIKRINTLTEYNEKKGYYDIYSSMVRENDEFEYGKYYDEDEQQNIFLWKWKKGGVIKCI
>NZ_CP046327.1|WP_009893844.1|3680896_3682024_+|HNH-endonuclease
MIIPKLEPNDRKREFNKYSSEQINKVVYNYLFKNNMSNRKIDDEILDLSSKQSKGYQSMGIVHHLGINKNHKGIFTGYTIDKAIEVLKEDEIHFKQIINILLEIRNINEYPIIVDSWELLDEKIALKTIDKSTLKHNGTGVPIEIRYFFEINNLGKNEKKNVNFKYNDNYYSAVIEMDKLENPRSRIIWKSKFRDLLRSIFSEYYEKFLENKIEGKTNLPKIRFIKLDSNNFNIEFIFTAEIEDDVLEEISQDNPLNINTINIELETEIRKEGKVKYVYGKQYERNPRNRIEAIKYHGTKCIVCGFDFEKTYGDRGKGYIEIHHIKPLSSVGEESNINPKTDLVPICSNCHRMIHRKKDNVLSIDDLKQIIKDSK
>NZ_CP046327.1|WP_009891535.1|3680351_3680624_+|hypothetical-protein
MYDEIIEIYFDYWINEHMYRSILEKDEYYIECWKEVKKINELLEINLEDDKKYLLVELNDLFNSLIEFERELSYKLGFKTGAKFIIELLK
>NZ_CP046327.1|WP_071587382.1|3678767_3680102_+|AAA-family-ATPase
MNNSNNLIKNTEAEQSILGSILLDSTIVEELEQMLNEDMFYHEEHKYIFNAIKEINKRNEVIDIITLTEELKRKGHLNNIGGISYITSLSTIVPTVSNFTSYVSIVIEKYKNRNIIDKFNKFNLGEIDDNTLIYQLENDINKANQKLIKKDSSITAISERAFEYINDEMNEGIKTGIKFLDDTIGGLYGGELTTIAAKSGRGKTALALQILRNVIFQGKKVLFISGEMSDIQILFRNIASLTGISVVKMKNRNLNDDEIVKYIQALSIINQENNLYINDSVNTVSGIKREIKSTKPSLVIIDYLQILDYEGKEVGEAKFADLSRQIKKITLDFNIPVIQLAQLNDELKDERPKGDRVMRSSKQIYMDSNSVIYIHRPTEKEALNYCKTMGIEDIRELRRREKGFGANLSEIIVAKNRDGESGFRPYWYIGNLFSFEECKKIQEI
>NZ_CP046327.1|WP_012816386.1|3678005_3678755_+|hypothetical-protein
MQLSNKGWIKLYRELLDKSIWKDIKPERKVILITLLLMASHKENHVFIDNKRIKIKSGQFISSYSKIAERCGKGVSYQMVRSCLLVFKNAGFLTYETTNKYIVITIENWELYQENIENQQPNQQTINNQSTTIKNIKNENNIIYSEIISKFNSTCIELSKVKKLTDTRKRRINSIIREYDKEAVLEVINIVSKTSFLNGNNNTGWKANFDWIMNSSNFTKILEGNYHSKEIVINKETGIYNPDDSQLKW
>NZ_CP046327.1|WP_003433761.1|3677675_3677990_+|hypothetical-protein
MKENNNLEVLKTLQATLNIIVKNEEEAQEKKQGYKIIENAKRNKAELITCKEASKLYPIGESKFRQLCHSKNKGFPCIWINNRVYIIKNKLDDWFIENANGIKL
>NZ_CP046327.1|WP_021397364.1|3691510_3691681_+|hypothetical-protein
MIYSIVIISIFFATPHTMNINISNLDMGIILISVLFIQFLSKLILYVYFDKREICN
>NZ_CP046327.1|WP_012816385.1|3692214_3693429_+|FRG-domain-containing-protein
MGEKMQSVICKIFDNKLLISNDLSEQDDVLYEVMDKFIDDIEYISKLGDEQIKSMLMEVNKFEEDSTEFELYMKNLCYLKQSYFIDTNDKSEINSIDIDILKNVKIEDLVDITNIKLERNLNINIEHISKAVNKIYEENEKWKEYNIQNTMSKYIGIPESEVIFISNLSQYVSFLSELDNAGDYVSRGQKDCMYELLPSLHRKYKKDYGIHSDEYEEAFKQKIIYYDKEIKNRSSEELRAEGQHFGLPTEYLDFTEAHLISLLFAIEDYKYTKQHSIVYFIDSISYNTDTIKRSEKLVNYSDTSAIDNCSKFSSRSFFIKVGNSNERIHFQKGCFLKVSSEDKGEFKEKLKKYCKVVVINKDAKKEILKELFNLGITFENIYPDKDNVVKSIKFYYDEIVGGNL
>NZ_CP046327.1|WP_009891519.1|3693428_3694721_+|DUF262-domain-containing-protein
MREQFKNSIKNIKSNRPLVSVQDIVNFIDKGEKYLKLSIDEIDEMEILQGIVMSPDYQRTYKSSNKEESSIIESLLIGIPIPEIFLVKIGVNDMQIRHVMDGQHRLNAIYRYVKNKYPLKNLDILGNDPLYDNKRFSELEKKDKIKILGSHLSILEFDGFDNPEIEIELFKRYNRNTKPLEMQEIEMATYFSETSKYISKFINTLIKDKYKDEIDKSEYKYANYKSDLLRIYNITKSRNDKQKNHQEICIIFSILENGLQENIRDGVTASKKFLEYKSIQYKNNESEKLELLKDKFDEFNRMILKISEKIEYPFSTSLISDDKQRQSKYLIGVSIVLASICYYYDIDLENNYLIQDIKKIISCSPIADIEYKASSTNMKNMILYLFIKNKIQDNKFESLNLKRDKIKEINTLVMNNDGYLNEQTRLLEIY
>NZ_CP046327.1|WP_021397354.1|3694947_3695133_-|IS3-family-transposase
MEGFWRILKVEMYYLRKLDTYEQLVKTIEDYIYYYNNFRYQKRLNSMSPLEFRKYLNTEIA
>NZ_CP046327.1|WP_021397345.1|3695162_3695552_-|DDE-type-integrase/transposase/recombinase
MRAVGLSSVCRKKKFSYVKCTPEVIAENVLSRKFSADKTSQKWLTGVTEFKLTNGMKAYLSAILDLDDRSIVSYVIGKSNNNNLVLETFDKAIELYPNAKPIFHNDKSFQYTSKVFKSKLLTQGMIQSM
>NZ_CP046327.1|WP_009891517.1|3695653_3695881_-|transposase
MDKRTFREWMRNYEAFGNDGLIKQSCKLCYCEEFKLNAIKSYLNGEGSYDTISKKYKMRSVYSLKAWGKEYNPHK
>NZ_CP046327.1|WP_009891516.1|3696452_3697463_+|hypothetical-protein
MITKIKKTYIYLKEIQKIYKINEHKELVHIIKKLINDNKIKPIKTSDLTPQHEQLYTKYRIIKQETEEDKKILEEINYKICDKLSIDYYRKNLVHYKNNRVAIMDLNSYLIKKSDNLSKKISINERSYEIFKDEKFISSKVGKEVLKNLKIDLIKDLNVYKTPEPFIYLSINRISPQKILIIENKDTYITITKMLLEGKEILKNKIDTVIYGEGKKIINSIKGLKEDITIEYLTNKENEFLYWGDIDKTGLSIYTSLKDTNEINNIRLFEVAYEHMIDKTKENTLRNIPKNQKDNFECGLENINNLNLKESIKNILVQGKYIPQEALNRFDLEEYN
>NZ_CP046327.1|WP_009891515.1|3697462_3699082_+|hypothetical-protein
MEMINILEGYNKRVNCIGSYYLIATLANNRNKFKEFDNIQFYNLLIQVLCYIFDRSLRRKNCLRDDIKDFIEEINRMDYKIMLSEDDLKDLANYIINGLTNSGKVYLFTYYSLEQEKHIDESIKIIEDKNVKINNQERLSYSLTTEGYRLLLSTKEYDELFQIQISQMIAKLRIEKGDYQGAKEDIYDIINTLEIHQQKIDNYIKIIKVNILYIKEEKYSTVIDTTVETLLEEMDKYEELKKEVKLLIKDKEDYLEKDEDIDKEKIKNIRTQLLQMKELIDGIVLAKSTATNLLSRVQDFREEFKEILKKLLTTPVIKRFNFKEEILDRLEKDSDFLLIIRELYISLFKVELPNRFNIGVAYQEQKLLNTREIENEIVNKDELEIIENKEKEERINYCENYYFDFFKYLIKYGLEKGQFTLEEFLKNYLKYDKVIYLEITKDSKLMRDIIIYFANQRESINIKKIIRMLENSAFSPNTDFQIERLIERLLVEDFELLNSVSHIKSNKIFEDEMKINTEINLETMTAVKLEIANIKFEII
>NZ_CP046327.1|WP_009891514.1|3699099_3699828_+|hypothetical-protein
MNISLNDYKIANEIFYRLLKKSELKEKEAKELFLAYINNSNVRYALEAICEVSKIKIILISDTLYLIPNNDNDIFGFDYRRESLLGKDLKDSYLGYLIMTIIFSEFTNGVAPASYIQVLNLLDLVQESLERSIARDNLEEIEKSCEFNITILKNYWESKRKWDESSKKGIETTSADFQIGFIRKIINFLKNEGLIVHIEDEDKIKPTRRFLDLMNNYFLDEERKVLIEKLVLRKGESINASN
>NZ_CP046327.1|WP_009891513.1|3699814_3704170_+|hypothetical-protein
MPVINKYKIINFKFGMGQERILSNRTMELYGENLQVEAENTAGKTMSIQTIIQSICPLSDVAKPFTAIYNKKEPLYSMTEWLLDDGKTLLLTGIGFEKKAGSSKEEGKEKKDDLYKYFMFIIEESKEMEVDIDNIPLLKNNDKGIRIVQPLTASQDYIKMLRDKYGKNKVHFFNNYLRKQHREKLEEYGINQSEWKEIIIKLNSNNKEGGLSDFVKEHNTSEKLIRDKILPLIETSLTTEEFAPILQIKEQVRKCINNIIDMNEKLSDYKNYRDLNIRVESLQNKINRILFIEEDKNNVLGELANLYVHIENKRNELNEEIKQYQKMKASKEEEFKIVEYEEDSYEYFRKEKEIQDTQVEFDKAKNELNDKIEELELDEQYLNISKFKRKKKGLEEGEKDKIEKESEKQRKEVNQEEITAIINRLGSSIHYCLKEESIINNEKLKENTNNNIAIQEKKNQLNDDKSKLTKVLISKNSEIKYIEGKERDFNNQLHEFKLNNTDIKGFISNNFLGEVIDYTRYINYLNIKVKSIEENLESKVMQIEESNKLKDDINEAINNLKLDNHESYMKLQVLKTRKKDIDNFKEKYKIIKTRFEIDNELDNSTKLYKEVKQELNKMKLQVQDLENNKKQLEKELEDLQNYKDIIFEEEILTDLERNGIKPIEGMKYLLTLDGDLEYKNNLISKNPLLPYSIIITNKEYQKLKQINLKNKTKISMPIFVRDNIEDTFITTSSNLVISNGLNILSSFDNKALDPEKREKDMNLIKEQINSIRDKVEQYKAEIEILEEFKLLTNKIDFTAEDLSIDVKIENYKKIIFEINNKIKSNENNEKNLSNKIKELYENKEKLLNNKNILFNKLKDIRNIQDTYSIILENKNEITKLKTSIEKIEEEKKVIKKSIEDIDVNIFNLNSEKDRINRHIDDTESKINKFKIYEPIKLENAKLEELEIKYKKYLEDPTKKEIETLNYEISVCLKRIESITIELEEFRQLISSDNFENIPILFTIEELNKRIVLNKSKVDELRKLKYSIKSDIDKNQGSLNTKREEILKKFNGKEPLSTSLIVNFNFEERKIDIKKDIKDIGEIIEGNRTTCQNLEQELRDLKKYKVERKAITYQPEDIFIESKKLQSKLQNVEYNLIKSINSYKNTILEIKEFNYKHMEKYKNFIETLNVNKDNYSRQKEQVEIVLLVIREEISKLEKHSEQLRKEKTIISRQIKDYVMDCIDEFKIINKLGKHKGQALFNISLPKSDKIENSLSLVDMLMDEIVEEANLGDVEQKINTFYILNKTLNIGRIPVSVIKYEINRNETIKWNSINNETTGGQRFCISFIVTILLMEYKRYDRNAIVDESKYKGKVLLMDNPFGETSQQDFLKEIFELAKKFNVQIISYTHVTNASIRAMFNKIYLMTVEKTTSNKEFVDINEIKQNKTDELVYMSKFYIGNKEELIQEDIFSLI

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Crispr_ID: NZ_CP046327_13

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046327_13

3934424-3936170

Unclear

I-A

Consensus_repeat	Method
GTTTTATATTAACTAAGTGGTATGTAAAT	PILER-CR
GTTTTATATTAACTAAGTGGTATGTAAAT	CRISPRCasFinder
GTTTTATATTAACTAAGTGGTATGTAAAT	CRT

26 spacers

cas2,cas1,cas4,cas3,cas5,cas7,cas8b2,cas6,WYL

The CRISPR arrays of NZ_CP046327_13

>merge|NZ_CP046327|13|3934424-3936170|PILER-CR,CRISPRCasFinder,CRT
GTTTTATATTAACTAAGTGGTATGTAAATAAGCAACTATAGTAGAAGCAAAAGCGACAACAACTAAAGGTTTTATATTAACTAAGTGGTATGTAAATTTGGTTAACTTAAGTGCTATGAAAGGAATTAATGAAGTTTTATATTAACTAAGTGGTATGTAAATTTAAAGGTGCAAGTCTTAATACTTGTTACATGAGTTGTTTTATATTAACTAAGTGGTATGTAAATAACAAAGAACCATTTGAATCACGAAAACTAAAAAACAGTTTTATATTAACTAAGTGGTATGTAAATTTATTAACCTTATCAGAAACCTGACCATCCCAATTATAGTTTTATATTAACTAAGTGGTATGTAAATTCCATTTGTCTAATGCTTCTAACTCTTTTTTTATACGTTTTATATTAACTAAGTGGTATGTAAATTCCAAAATGGGCTTGGAGTTAAGAGTTGTATAAGAAACGTTTTATATTAACTAAGTGGTATGTAAATTAATTACACACTCCCTTTTAACGAACATATTTTAGATTGTTTTATATTAACTAAGTGGTATGTAAATAGACTCGACATAGAATCGGTTACTAAATCCGAGGGTTTCAGGTTTTATATTAACTAAGTGGTATGTAAATACTAAACCTTTTTGTTTACTTTTATTTCTCATTTTACGTTTTATATTAACTAAGTGGTATGTAAATCCGGATTTTTCTGCTTCGACTGTTGTTATTGAGACTTGTTTTATATTAACTAAGTGGTATGTAAATAGTAATTCCATGCAATCTTTTATATTGCTTTTTAACCTGTTTTATATTAACTAAGTGGTATGTAAATAGATATACAAGGTGAAAGTGTTGAAATTTCAATCTTGTTTTATATTAACTAAGTGGTATGTAAATATTCTTAGATGTTATAATTTGTGTTGCATTTAAATCGTTTTATATTAACTAAGTGGTATGTAAATACAATATTATTGTTCATTTCATTTAATAATTCTAGTAGTTTTATATTAACTAAGTGGTATGTAAATTTGTTTATACCTTTAATCTTTAAAATTAAATATAAAAGTTTTATATTAACTAAGTGGTATGTAAATCATTGTATACTAAGCTTGATATAGTGCAAAATGAAACGTTTTATATTAACTAAGTGGTATGTAAATACTAATTGGGTTAAACAAATGGATATAACTAAATTAGTTTTATATTAACTAAGTGGTATGTAAATCCAACCCTTCGCACGAATCCGTGCGACGAAATATAAAGTTTTATATTAACTAAGTGGTATGTAAATTGTAAAAATATTGCTTAGCATATTGATATCACTAACTGTTTTATATTAACTAAGTGGTATGTAAATACAAGAGGTTTTTCAGCAATATATGTACTTCTATAATGTTTTATATTAACTAAGTGGTATGTAAATTCATCAATATTAATTTTGGGAATATCAACATTTTTTGCGTTTTATATTAACTAAGTGGTATGTAAATGCGATAAGAGATTCGAGTCTTTTTACTGGGCTTAATCGTTTTATATTAACTAAGTGGTATGTAAATAGGATAAAGAAAAGACTCACACAAGACACAGTGTCAGGTTTTATATCAACTAAGTGGTAGATAAGTAGAATATTAGCAATATCAACGAGTATTTAGAAACTTATTTTATATTAATAAAGCAGTATATAAAATTGTAGAATAAACAATAGCATATACTAAAACATCCACCTTATATTAACTAAATCATATCTAAAT

>NZ_CP046327|13|9|3934424-3935975|PILER-CR
GTTTTATATTAACTAAGTGGTATGTAAAT	AAGCAACTATAGTAGAAGCAAAAGCGACAACAACTAAAG
GTTTTATATTAACTAAGTGGTATGTAAAT	TTGGTTAACTTAAGTGCTATGAAAGGAATTAATGAA
GTTTTATATTAACTAAGTGGTATGTAAAT	TTAAAGGTGCAAGTCTTAATACTTGTTACATGAGTT
GTTTTATATTAACTAAGTGGTATGTAAAT	AACAAAGAACCATTTGAATCACGAAAACTAAAAAACA
GTTTTATATTAACTAAGTGGTATGTAAAT	TTATTAACCTTATCAGAAACCTGACCATCCCAATTATA
GTTTTATATTAACTAAGTGGTATGTAAAT	TCCATTTGTCTAATGCTTCTAACTCTTTTTTTATAC
GTTTTATATTAACTAAGTGGTATGTAAAT	TCCAAAATGGGCTTGGAGTTAAGAGTTGTATAAGAAAC
GTTTTATATTAACTAAGTGGTATGTAAAT	TAATTACACACTCCCTTTTAACGAACATATTTTAGATT
GTTTTATATTAACTAAGTGGTATGTAAAT	AGACTCGACATAGAATCGGTTACTAAATCCGAGGGTTTCAG
GTTTTATATTAACTAAGTGGTATGTAAAT	ACTAAACCTTTTTGTTTACTTTTATTTCTCATTTTAC
GTTTTATATTAACTAAGTGGTATGTAAAT	CCGGATTTTTCTGCTTCGACTGTTGTTATTGAGACTT
GTTTTATATTAACTAAGTGGTATGTAAAT	AGTAATTCCATGCAATCTTTTATATTGCTTTTTAACCT
GTTTTATATTAACTAAGTGGTATGTAAAT	AGATATACAAGGTGAAAGTGTTGAAATTTCAATCTT
GTTTTATATTAACTAAGTGGTATGTAAAT	ATTCTTAGATGTTATAATTTGTGTTGCATTTAAATC
GTTTTATATTAACTAAGTGGTATGTAAAT	ACAATATTATTGTTCATTTCATTTAATAATTCTAGTA
GTTTTATATTAACTAAGTGGTATGTAAAT	TTGTTTATACCTTTAATCTTTAAAATTAAATATAAAA
GTTTTATATTAACTAAGTGGTATGTAAAT	CATTGTATACTAAGCTTGATATAGTGCAAAATGAAAC
GTTTTATATTAACTAAGTGGTATGTAAAT	ACTAATTGGGTTAAACAAATGGATATAACTAAATTA
GTTTTATATTAACTAAGTGGTATGTAAAT	CCAACCCTTCGCACGAATCCGTGCGACGAAATATAAA
GTTTTATATTAACTAAGTGGTATGTAAAT	TGTAAAAATATTGCTTAGCATATTGATATCACTAACT
GTTTTATATTAACTAAGTGGTATGTAAAT	ACAAGAGGTTTTTCAGCAATATATGTACTTCTATAAT
GTTTTATATTAACTAAGTGGTATGTAAAT	TCATCAATATTAATTTTGGGAATATCAACATTTTTTGC
GTTTTATATTAACTAAGTGGTATGTAAAT	GCGATAAGAGATTCGAGTCTTTTTACTGGGCTTAATC
GTTTTATATTAACTAAGTGGTATGTAAAT

>NZ_CP046327|13|12|3934424-3936170|CRISPRCasFinder
GTTTTATATTAACTAAGTGGTATGTAAAT	AAGCAACTATAGTAGAAGCAAAAGCGACAACAACTAAAG
GTTTTATATTAACTAAGTGGTATGTAAAT	TTGGTTAACTTAAGTGCTATGAAAGGAATTAATGAA
GTTTTATATTAACTAAGTGGTATGTAAAT	TTAAAGGTGCAAGTCTTAATACTTGTTACATGAGTT
GTTTTATATTAACTAAGTGGTATGTAAAT	AACAAAGAACCATTTGAATCACGAAAACTAAAAAACA
GTTTTATATTAACTAAGTGGTATGTAAAT	TTATTAACCTTATCAGAAACCTGACCATCCCAATTATA
GTTTTATATTAACTAAGTGGTATGTAAAT	TCCATTTGTCTAATGCTTCTAACTCTTTTTTTATAC
GTTTTATATTAACTAAGTGGTATGTAAAT	TCCAAAATGGGCTTGGAGTTAAGAGTTGTATAAGAAAC
GTTTTATATTAACTAAGTGGTATGTAAAT	TAATTACACACTCCCTTTTAACGAACATATTTTAGATT
GTTTTATATTAACTAAGTGGTATGTAAAT	AGACTCGACATAGAATCGGTTACTAAATCCGAGGGTTTCAG
GTTTTATATTAACTAAGTGGTATGTAAAT	ACTAAACCTTTTTGTTTACTTTTATTTCTCATTTTAC
GTTTTATATTAACTAAGTGGTATGTAAAT	CCGGATTTTTCTGCTTCGACTGTTGTTATTGAGACTT
GTTTTATATTAACTAAGTGGTATGTAAAT	AGTAATTCCATGCAATCTTTTATATTGCTTTTTAACCT
GTTTTATATTAACTAAGTGGTATGTAAAT	AGATATACAAGGTGAAAGTGTTGAAATTTCAATCTT
GTTTTATATTAACTAAGTGGTATGTAAAT	ATTCTTAGATGTTATAATTTGTGTTGCATTTAAATC
GTTTTATATTAACTAAGTGGTATGTAAAT	ACAATATTATTGTTCATTTCATTTAATAATTCTAGTA
GTTTTATATTAACTAAGTGGTATGTAAAT	TTGTTTATACCTTTAATCTTTAAAATTAAATATAAAA
GTTTTATATTAACTAAGTGGTATGTAAAT	CATTGTATACTAAGCTTGATATAGTGCAAAATGAAAC
GTTTTATATTAACTAAGTGGTATGTAAAT	ACTAATTGGGTTAAACAAATGGATATAACTAAATTA
GTTTTATATTAACTAAGTGGTATGTAAAT	CCAACCCTTCGCACGAATCCGTGCGACGAAATATAAA
GTTTTATATTAACTAAGTGGTATGTAAAT	TGTAAAAATATTGCTTAGCATATTGATATCACTAACT
GTTTTATATTAACTAAGTGGTATGTAAAT	ACAAGAGGTTTTTCAGCAATATATGTACTTCTATAAT
GTTTTATATTAACTAAGTGGTATGTAAAT	TCATCAATATTAATTTTGGGAATATCAACATTTTTTGC
GTTTTATATTAACTAAGTGGTATGTAAAT	GCGATAAGAGATTCGAGTCTTTTTACTGGGCTTAATC
GTTTTATATTAACTAAGTGGTATGTAAAT	AGGATAAAGAAAAGACTCACACAAGACACAGTGTCAG
GTTTTATATCAACTAAGTGGTAGATAAGT	AGAATATTAGCAATATCAACGAGTATTTAGAAACTT
ATTTTATATTAATAAAGCAGTATATAAAA	TTGTAGAATAAACAATAGCATATACTAAAACATCC
ACCTTATATTAACTAAATCATATCTAAAT

>NZ_CP046327|13|10|3934424-3936041|CRT
GTTTTATATTAACTAAGTGGTATGTAAAT	AAGCAACTATAGTAGAAGCAAAAGCGACAACAACTAAAG
GTTTTATATTAACTAAGTGGTATGTAAAT	TTGGTTAACTTAAGTGCTATGAAAGGAATTAATGAA
GTTTTATATTAACTAAGTGGTATGTAAAT	TTAAAGGTGCAAGTCTTAATACTTGTTACATGAGTT
GTTTTATATTAACTAAGTGGTATGTAAAT	AACAAAGAACCATTTGAATCACGAAAACTAAAAAACA
GTTTTATATTAACTAAGTGGTATGTAAAT	TTATTAACCTTATCAGAAACCTGACCATCCCAATTATA
GTTTTATATTAACTAAGTGGTATGTAAAT	TCCATTTGTCTAATGCTTCTAACTCTTTTTTTATAC
GTTTTATATTAACTAAGTGGTATGTAAAT	TCCAAAATGGGCTTGGAGTTAAGAGTTGTATAAGAAAC
GTTTTATATTAACTAAGTGGTATGTAAAT	TAATTACACACTCCCTTTTAACGAACATATTTTAGATT
GTTTTATATTAACTAAGTGGTATGTAAAT	AGACTCGACATAGAATCGGTTACTAAATCCGAGGGTTTCAG
GTTTTATATTAACTAAGTGGTATGTAAAT	ACTAAACCTTTTTGTTTACTTTTATTTCTCATTTTAC
GTTTTATATTAACTAAGTGGTATGTAAAT	CCGGATTTTTCTGCTTCGACTGTTGTTATTGAGACTT
GTTTTATATTAACTAAGTGGTATGTAAAT	AGTAATTCCATGCAATCTTTTATATTGCTTTTTAACCT
GTTTTATATTAACTAAGTGGTATGTAAAT	AGATATACAAGGTGAAAGTGTTGAAATTTCAATCTT
GTTTTATATTAACTAAGTGGTATGTAAAT	ATTCTTAGATGTTATAATTTGTGTTGCATTTAAATC
GTTTTATATTAACTAAGTGGTATGTAAAT	ACAATATTATTGTTCATTTCATTTAATAATTCTAGTA
GTTTTATATTAACTAAGTGGTATGTAAAT	TTGTTTATACCTTTAATCTTTAAAATTAAATATAAAA
GTTTTATATTAACTAAGTGGTATGTAAAT	CATTGTATACTAAGCTTGATATAGTGCAAAATGAAAC
GTTTTATATTAACTAAGTGGTATGTAAAT	ACTAATTGGGTTAAACAAATGGATATAACTAAATTA
GTTTTATATTAACTAAGTGGTATGTAAAT	CCAACCCTTCGCACGAATCCGTGCGACGAAATATAAA
GTTTTATATTAACTAAGTGGTATGTAAAT	TGTAAAAATATTGCTTAGCATATTGATATCACTAACT
GTTTTATATTAACTAAGTGGTATGTAAAT	ACAAGAGGTTTTTCAGCAATATATGTACTTCTATAAT
GTTTTATATTAACTAAGTGGTATGTAAAT	TCATCAATATTAATTTTGGGAATATCAACATTTTTTGC
GTTTTATATTAACTAAGTGGTATGTAAAT	GCGATAAGAGATTCGAGTCTTTTTACTGGGCTTAATC
GTTTTATATTAACTAAGTGGTATGTAAAT	AGGATAAAGAAAAGACTCACACAAGACACAGTGTCAG
GTTTTATATCAACTAAGTGGTAGATAAGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046327.1\|WP_009891255.1\|3938217_3938763_+\|biotin-transporter-BioY	unknown	unknown	gnl\|CDD\|376871
NZ_CP046327.1\|WP_009891259.1\|3936230_3936659_+\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|236715
NZ_CP046327.1\|WP_009893750.1\|3939934_3941326_+\|AMP-binding-protein	unknown	unknown	gnl\|CDD\|341288
NZ_CP046327.1\|WP_009893753.1\|3926593_3928471_+\|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1	cas8b2	cd09665_cas8b2_CAS-I-B	gnl\|CDD\|187796
NZ_CP046327.1\|WP_009891265.1\|3932469_3932988_+\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|366863
NZ_CP046327.1\|WP_009891261.1\|3933973_3934240_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP046327.1\|WP_009891250.1\|3941401_3942277_+\|dipicolinate-synthase-subunit-DpsA	unknown	unknown	gnl\|CDD\|181371
NZ_CP046327.1\|WP_009891263.1\|3932990_3933971_+\|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	gnl\|CDD\|274695
NZ_CP046327.1\|WP_009891236.1\|3946711_3948931_+\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|238923
NZ_CP046327.1\|WP_009891268.1\|3928472_3929387_+\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	cas7	cd09687_cas7_CAS-I-B	gnl\|CDD\|187818
NZ_CP046327.1\|WP_009893752.1\|3930100_3932422_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|273707
NZ_CP046327.1\|WP_009891274.1\|3922660_3924577_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|376899
NZ_CP046327.1\|WP_009891270.1\|3925850_3926588_+\|CRISPR-associated-endoribonuclease-Cas6	cas6	pfam01881_cas6_CAS-I:CAS-III	gnl\|CDD\|187783
NZ_CP046327.1\|WP_009891252.1\|3938794_3939931_+\|thiolase-family-protein	unknown	unknown	gnl\|CDD\|238383
NZ_CP046327.1\|WP_009893748.1\|3943077_3943278_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046327.1\|WP_012816356.1\|3924855_3925773_+\|WYL-domain-containing-protein	WYL	pfam13280_WYL_CAS-I:CAS-III	gnl\|CDD\|379100
NZ_CP046327.1\|WP_009891246.1\|3943781_3946436_+\|bifunctional-acetaldehyde-CoA/alcohol-dehydrogenase	unknown	unknown	gnl\|CDD\|237515
NZ_CP046327.1\|WP_009891257.1\|3937114_3937894_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046327.1\|WP_003429956.1\|3942279_3942870_+\|dipicolinate-synthase-subunit-B	unknown	unknown	gnl\|CDD\|181370
NZ_CP046327.1\|WP_003439785.1\|3929388_3930090_+\|type-I-B-CRISPR-associated-protein-Cas5	cas5	cd09658_cas5_CAS-I-B	gnl\|CDD\|187789

Protein	Function_ID	Function_description	E-value
NZ_CP046327.1\|WP_009891259.1\|3936230_3936659_+\|N-acetyltransferase	gnl\|CDD\|236715	PRK10562, PRK10562, putative acetyltransferase; Provisional.	2.36859e-47
NZ_CP046327.1\|WP_009893750.1\|3939934_3941326_+\|AMP-binding-protein	gnl\|CDD\|341288	cd17633, AFD_YhfT-like, fatty acid-CoA ligase VraA. This family of acyl-CoA ligases includes Bacillus subtilis YhfT, as well as long-chain fatty acid-CoA ligase VraA, all of which are as yet to be characterized. These proteins belong to the adenylate-forming enzymes which catalyze an ATP-dependent two-step reaction to first activate a carboxylate substrate as an adenylate and then transfer the carboxylate to the pantetheine group of either coenzyme A or an acyl-carrier protein. The active site of the domain is located at the interface of a large N-terminal subdomain and a smaller C-terminal subdomain	3.59586e-143
NZ_CP046327.1\|WP_009893753.1\|3926593_3928471_+\|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1	gnl\|CDD\|187796	cd09665, Cas8a1_I-A, CRISPR/Cas system-associated protein Cas8a1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; signature gene for I-A subtype; also known as CXXC_CXXC family.	1.19691e-23
NZ_CP046327.1\|WP_009891265.1\|3932469_3932988_+\|CRISPR-associated-protein-Cas4	gnl\|CDD\|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	9.88034e-60
NZ_CP046327.1\|WP_009891261.1\|3933973_3934240_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	1.14416e-27
NZ_CP046327.1\|WP_009891250.1\|3941401_3942277_+\|dipicolinate-synthase-subunit-DpsA	gnl\|CDD\|181371	PRK08306, PRK08306, dipicolinate synthase subunit DpsA.	2.53081e-132
NZ_CP046327.1\|WP_009891263.1\|3932990_3933971_+\|type-I-B-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274695	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes Cas1 subgroup that includes Cas1 proteins of the related HMARI and TNEAP subtypes of CRISPR/Cas system.	2.04741e-174
NZ_CP046327.1\|WP_009891236.1\|3946711_3948931_+\|EAL-domain-containing-protein	gnl\|CDD\|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	2.79366e-107
NZ_CP046327.1\|WP_009891268.1\|3928472_3929387_+\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	gnl\|CDD\|187818	cd09687, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas7 is a RAMP superfamily protein; Subunit of the Cascade complex; also known as Cst2/DevR family.	1.761e-53
NZ_CP046327.1\|WP_009893752.1\|3930100_3932422_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|273707	TIGR01587, CRISPR-associated_endonuclease/helicase_Cas3, CRISPR-associated helicase Cas3. This model represents the highly conserved core region of an alignment of Cas3, a protein found in association with CRISPR repeat elements in a broad range of bacteria and archaea. Cas3 appears to be a helicase, with regions found by pfam00270 (DEAD/DEAH box helicase) and pfam00271 (Helicase conserved C-terminal domain). Some but not all members have an N-terminal HD domain region (pfam01966) that is not included within this model.	5.16278e-56
NZ_CP046327.1\|WP_009891274.1\|3922660_3924577_+\|ABC-transporter-permease	gnl\|CDD\|376899	pfam02687, FtsX, FtsX-like permease family. This is a family of predicted permeases and hypothetical transmembrane proteins. Buchnera aphidicola LolC has been shown to transport lipids targeted to the outer membrane across the inner membrane. Both LolC and Streptococcus cristatus TptD have been shown to require ATP. This region contains three transmembrane helices.	8.95698e-09
NZ_CP046327.1\|WP_009891270.1\|3925850_3926588_+\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|187783	cd09652, Cas6-I-III, CRISPR/Cas system-associated RAMP superfamily protein Cas6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6 is an endoribonuclease that generates crRNAs, predicted subunit of Cascade complex; RAMP superfamily protein; Possesses double RRM/ferredoxin fold.	4.93502e-20
NZ_CP046327.1\|WP_009891252.1\|3938794_3939931_+\|thiolase-family-protein	gnl\|CDD\|238383	cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.	2.05258e-109
NZ_CP046327.1\|WP_012816356.1\|3924855_3925773_+\|WYL-domain-containing-protein	gnl\|CDD\|379100	pfam13280, WYL, WYL domain. WYL is a Sm-like SH3 beta-barrel fold containing domain. It is a member of the WYL-like superfamily, named for three conserved amino acids found in a subset of the superfamily. However, these residues are not strongly conserved throughout the family. Rather, the conservation pattern includes four basic residues and a position often occupied by a cysteine, which are predicted to line a ligand-binding groove typical of the Sm-like SH3 beta-barrels. A WYL domain protein (sll7009) is a negative regulator of the I-D CRISPR-Cas system in Synechocystis sp. It is predicted to be a ligand-sensing domain that could bind negatively charged ligands, such as nucleotides or nucleic acid fragments, to regulate CRISPR-Cas and other defense systems such as the abortive infection AbiG system.	6.14471e-40
NZ_CP046327.1\|WP_009891246.1\|3943781_3946436_+\|bifunctional-acetaldehyde-CoA/alcohol-dehydrogenase	gnl\|CDD\|237515	PRK13805, PRK13805, bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional.	0
NZ_CP046327.1\|WP_009891255.1\|3938217_3938763_+\|biotin-transporter-BioY	gnl\|CDD\|376871	pfam02632, BioY, BioY family. A number of bacterial genes are involved in bioconversion of pimelate into dethiobiotin. BioY is a component of the BioMNY transport system involved in biotin uptake in prokaryotes.	2.43536e-36
NZ_CP046327.1\|WP_003429956.1\|3942279_3942870_+\|dipicolinate-synthase-subunit-B	gnl\|CDD\|181370	PRK08305, spoVFB, dipicolinate synthase subunit B; Reviewed.	6.40655e-126
NZ_CP046327.1\|WP_003439785.1\|3929388_3930090_+\|type-I-B-CRISPR-associated-protein-Cas5	gnl\|CDD\|187789	cd09658, Cas5_I-B, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	4.28951e-66

>NZ_CP046327.1|WP_009891261.1|3933973_3934240_+|CRISPR-associated-endonuclease-Cas2
MFVIVTYDIVEARSLNRIRRILRKYLTWTQNSVFEGNITDGKLHKCISEIENIIDNSEDSIYVYEIKNPNSIKKKCYGIDKYSDEMFI
>NZ_CP046327.1|WP_009891263.1|3932990_3933971_+|type-I-B-CRISPR-associated-endonuclease-Cas1
MYKDYYIISNGNIKRKENTIYYYNLEGEKKILPVEQVDDIHIYGEVDLNTKLINYISKYGVMLHFYNYYGYYSGTYYPRKKNVSGFSLVCQSACYLDKNERLYLAKSFVESASYHILRNMRYYKVDESLIDTIKDELNDLNDVKEISELMGKEGRIRKTYYKSFNQILKDDFEFYKREKRPPKDPVNTLMSFGNSIMYTNVLSEIYKTQLDPTISFLHEPSTKRFSLSLDIAEIFKPIIVDTIIFSLINNKRINKNDFEYQDKICYLSEKGKKKFLQEFENKMQTTIKHRNLNRKVSYRMFIRLECYKLIKHFINDERYKVLKVWW
>NZ_CP046327.1|WP_009891265.1|3932469_3932988_+|CRISPR-associated-protein-Cas4
MPIDLEVLKVQGVKINYYYVCKRKLWLFSKGITMEQNSSRVLSGKIVHEDSYKRMKNKEMLIDDILKLDIIKDEYVKEVKISSKMKEADEMQLYYYLYYLKNSMGIEKKGTINYVKEKKQEELILTEEKEKIIENTLININEINMQLSPPKIEKKHYCTKCAYYEFCFVKEE
>NZ_CP046327.1|WP_009893752.1|3930100_3932422_+|CRISPR-associated-helicase/endonuclease-Cas3
MLYAKSNPVETLREHTDELLKQMNVLRESYGKNINSLDFLEEEIFWQLLDFVIEFHDIGKAFSPFQELIKSRMDTKINEPKIVTHLENNVGHNYLSPAFIDYSYIDRKKNKELRAVLNQVIVYHHERDIFIDKDFKNLIQKILDEDLINKVYELQREFKVRYPIKTEKLSKVYLQSVEKRIDKNHKYYNLYIMLKGILHRLDHSASAHEVVECNNVINIGEQTENYLMKEFGSLREAQSFAKSNRNKNIILIASTGMGKTETALIWIDKDKAFFTLPLRVSINALFDRAKNIIGVGEANDTFLGLLHSTAIDYLEESNQENSSEIVDLAKLLSCKLTFSTIDQIFKFPFLYRGYEKVYSTLAYSKVVIDEIQAYSPEIAAVLVKGIEMIHKIGGRFMIMTATMPTIYIDELKKRGVMNSNLADLTCNTEKIRHCVSIVENSIDENLGKIIQSGMNKKVLVIVNTVKSAVEKYELIEEIVKPKGIDVNLNLLHSMYIQEDRAKLEKYIKEFADSDSNGIWITTQLVEASLDIDFDELHTENSTLDSLFQRFGRCYRSREYEENSPNIFIYTEKATGIGSIYDKDIVEKGLELLKTFINGKECVKMKEKYKVEMVKILYSKESLEGTAFEKRFTSALNILDTITPYSLGSKDAQNILRNIEGYTVIPEDIYNKIEETLIKDYEELGQELINAYSNDDRQLINKIKSKRKKARREIIKKTVNLPIYKAKQNVIDIQVKGLEDLKILLYKYDIHENKHTKQIFGKGVLISNEIDQFI
>NZ_CP046327.1|WP_003439785.1|3929388_3930090_+|type-I-B-CRISPR-associated-protein-Cas5
MKVLKLDLFQETACYKKPFAMKITETYPLPPYSTINGLIHKILNATEYIPFNISVQGTYESIFNNYQTTYFYKKDSITSMPMNSHMLLNVNLIIHIGGDFDLLEEIYDSLLNYDEHLSLGRKEDLVRINDIRFVEVNKFEVDEDIQLDDYENYKLSECNIRMPIYIPKTSLQDTDIDGISYRLNNYYDNNAVEDKKRVWNKVDSYYVEDGNTISIGDILLDNEGDLLYFNNIN
>NZ_CP046327.1|WP_009891268.1|3928472_3929387_+|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR
MKRGLTFTVIAQAQSLNYGEGIGNISELKKLSRDDGNIYTFASRQCLRYDIVRLAAELFNWNLQVVDKEKGTIQFKDNISIRESEEMDLFGYMKTNKKDEKDKKGGSLTREATVRLSNAISLEPYRSDMDFLNNKGLADRIGEHPNLANIEQHLSYYTYTVTIDLSKIGKDGDIELDNKEKCRRVVEFLEIIKVLNRNIRGRQENLSPLFVVGGVYEIANPFFLGRIKLKGDKNGFKINKQAIEEVIQGTFLGKDLKEFTYVGMVDGVFINKEEFKGLFEDNFLSVDKFFGQLVKEVKEYYGVN
>NZ_CP046327.1|WP_009893753.1|3926593_3928471_+|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1
MKLRVYRGDWFFNMGIVGFLNIIKKADKQAEIFIMEDYIEFDSLFLENFHEYYFNYFMDEYDVSKRIKKNIDYSINFIKSKPDRIKDGIKKIKDSVKQQNDKIKKFDEEKFNLIKEKLDSMSKIKSYDEFDSLEALVDETIDIFKIKSINDRLTANLYKYVVQDNYFGQVSFFNVAKAKLDLDGLKQIMFNDYLRQIIYFGELADLLEENDYDKLKNYLNDRLNSIAKDINEKKVSKSSINTIEKIMKEINKNFIKKNKSIEDIKEYMDSLEVCEMCGLYKGILDEYSESNFAPLGVSTNNARNMFWNQAYVPSICDICKLILFCTPAGATYTRKNYLINEENEFYLFVNMDTSINELFERNNSLKAQKSEYSDSKDENPFNQLIKSIVEENTLKSEWQLRNILFVEFKASIDSKKCKINYFNIPTYLAKFFTDKYANKKIQSIYDYKLKSNVLDLLLKNRDLKHLTNNILRNKVKNDMESNNKSNISGIDCFRVVQLRALINSYKKGVYKMDSKNLEKNDEKLRIIYYLGCDIHDYFVNKNSKNKIDGVSYKLLNSVKVGNKSDFMDTIIRVFMSAEKQIPAFILDIEIEKDLDFESIGHAFISGLISGKYEGKDKLPNEKEEK
>NZ_CP046327.1|WP_009891270.1|3925850_3926588_+|CRISPR-associated-endoribonuclease-Cas6
MKMKIEFSTGCIPISYNSLFMSIIKEAIRKSNEDYYKNMYYYKEKNNKKTKNFTFSVYIKKYSIEGDNFIIEDKVILNISTPDLELGFHIYNGLMTSKKCLYKAYELTRIRIDLSREKKVTEERVLFNALSPICVKSKEGKFLEITDDRYIEELNYITNEVVKNYRGNGLKRKLEFENIGLKKIVVKESLREFKKITGKEYQYINGYKGKFILKGDIDDLNLIYNLGIGFRRAQGFGDVDILEWR
>NZ_CP046327.1|WP_012816356.1|3924855_3925773_+|WYL-domain-containing-protein
MMILIQSRGKMKCKELSEELEVSERQIKSYKMYLEQAGIFINSTPGIYGGYEIDKCNSISLIKLLDSEVSILDMINSQLEYNNDIYKNEFNNIVEKIKAVLNTGEKSDTYMDYFTVQAQRNCDYKSEKNKCNEIIRAYTTKHKFWIEYYSLNSGNSERIVHPYGLFNYKSDTYMVAFCEKRFKFIDFKLCRIKDYKVLEEKYNVDKSFSWDEYSKNSIGIYKGEEINVVIKISHPFSIIIKEKVWVNNQQIIEYDDKSIMFKAKMRGYEEIKSWILSMGAYVEVVEPDRLRNDILSEIEKMKKIY
>NZ_CP046327.1|WP_009891274.1|3922660_3924577_+|ABC-transporter-permease
MNIKQFAINNISRNIKAYLGYLASIVISSSLLFSFIMFTSHPDLDVSQFPDYLKEGLKMSKIIAYLFLFFFVFYSVSVFLKSRYKEFGILYITGISKRQVMKLIFIENMIINIVSSVIGIIIGLIFAKIFLVVMSTFLELSPLKFYIPFNAILSTLIYFMILAVLTSIFTYFIVKENQVLKLLKGTKTPKPEPKTSLMLAILSICLFIIAYYNAITSTDQYTTYLRLVPVTSLTIVATYLFFSQFSVFFMKKLKLNKRFYRKNTNMLWISNLIYKVKDNARIFFLITITSAVAFTAIGTVYSFWKDVERQINLIYPNTIYYSTMTLHNDPKKPDSKEKDKERMMFIENNLKKENVDYTRTNGEFKTVFPKKSDFNVRIMKESKYLEITETIGVKPISFEDNECISLLSSSLPGNNNVKENIIVGNRGLKVAKQVEECVMPAYYKNMYVVKDNFYDSIESKFIVDRFTAFEVEDSSKTIEICREFENKFNNESGMQPYLFFSKELMIGTGKLIYSTFIFLAIFIGLIFFVTTSSFLYNKFYMDCQVDKKKYEQLNKLGMTYNEIKKASTIEIGIVFLFPYVVAVIHSIFALTALKNSFDIEVASSAVLVMGSLFLVQIVYFLIVRNNYLKEIRLNLVNF
>NZ_CP046327.1|WP_009891259.1|3936230_3936659_+|N-acetyltransferase
MIKKLNNKDINKIMEIWEKSTIKAHDFISKEYWQNNYNTVKNEYIPISDTFVYDDGDEIKGFISIIDKSFIGALFIEPKYQNLGIGGKLLDYATKKYKSLSLAVYKDNKKAVVFYNKKGFNIVKEQVNEDSGFKEYIMEYSK
>NZ_CP046327.1|WP_009891257.1|3937114_3937894_-|hypothetical-protein
MKVNENNINNIDEELDELSRKVYLESPDFWISISDKIIDKVFDEMLLFFAVKYNYFNIVCFAIENNYLDLNMPSKNKKYTNIMEHLLDTSKQNEDKKIYNYLLSLNKGNNLDERPILDELNCNISSDTFEKKDIYLPKYLCPSCNSNIFDTGYKVSNDITYKFSSKEAEPIEMSSEVSSIRCCNCDELLEDITLNKLYNLCKIQNCNNCGSNLTKVGIIAKKKMNFDENTEKFKDVSTSYCCGNCDSEINLSQREHFKI
>NZ_CP046327.1|WP_009891255.1|3938217_3938763_+|biotin-transporter-BioY
MKNTKVNIQDLTKMSICVALLCISSYIYIPLPFTPAGVTAQTIMINLIALILTPRQAFSTVGVYIMIGLIGIPVFGGGTSGIGKLLSPTGGFYFGFLFAALIISLLKGRNNDIKRYILITIFVGMPIIYFMGTVFMCYFNQMTVEAALFAAVVPFLIGDTIKSVIASFLGTKLNNVLRRNL
>NZ_CP046327.1|WP_009891252.1|3938794_3939931_+|thiolase-family-protein
MKEVFILGGLRSHIGLKNGIFQFVQPELLGASVLKDLIKKYEIDKIDEIICGNAVGTGGNIARLMTLTAGVSNEVPAFTVDMQCASAMMSIDIAFSKVKSGQCNLIIAGGFESSSLQPMRTYHKNDKRYNTNNPNYTVAQFSPDDNSQNSMLEGAERVAELYQIERADLDFWVKESHKRAKEAREEKILEDIISPINNSTYDEGIRDKMSQRLLDRMPPILGKETITNAANSCLINDGASFIIICSKKYLEHVKKKPKTKIINTCTIGTDATLSPTSAIQAMDKLLEIESLNYLDVSAVEFNEAFAVIDVLFQRKYPELIERYNIFGGALAYGHPYGASGAIITLHLLKALEKTKGRYGICSIAAAGGLGSALLLERV
>NZ_CP046327.1|WP_009893750.1|3939934_3941326_+|AMP-binding-protein
MNYYELLRIKKERHKNKNFLIIDGEKYTYENILSYSEQLGKQISLGENISILIYSKNIMFQLISFFAINYSKNIPIICHYNLSKKVLDDILLKNNISIIISDESMDVIDLYDDNNNEVAKKVNFSIFNPKFNLYMYQYKNLINYLDKSICMGALSSGSTSVPKVLYRTYESWAGFFPIQNGIFNISGESILFVNGTLSFTGNLNSIMSVLYEGGSIVISSGLNCKSWIRTIKQYNVTNIYLIPTKLQLLVKHLKEPVLKVVSIFTGSQLLFEYTARNLKKYMPKSEIILYYGASELNYITYLCYDELIEKPLSVGRPFPGIDIYIRGGKIFVNTEYAVYNATKPYSVNDIGYYDNDGYLIFEGRSDDIVNIGGFKVSSAKIENEVKKIPQIEDAIVLPYSDTIRGNQIVLFVITIDKITKKDLLIKMKDNLMKNEIPKKIIFLNSFPYTSSEKIDRLALLKML
>NZ_CP046327.1|WP_009891250.1|3941401_3942277_+|dipicolinate-synthase-subunit-DpsA
MSNQYDITVIGGDLRQVYMVKKLINKGYSVVTYGISNEIINGIVGKSTSLAEALSKSSIILCPIPFTKNQVNIENTDDCLDATIDNLLINLSPNQILFGGNIPTKVCKFCEQHSIQIYDFMKMNDVAILNAVATAEGAIAEAIKRSIINIHQSNCLVLGYGRCAQILAKKLYALDANVCVGARNNDARSTANAFGYSSISLSQLDEKLLQFDYIFNTIPECILTKERLEKVSQEVTIIDIASSPGGVDYSVVKEVGINATLCLGLPGKYSPKTSGEILVNAIENIINERRD
>NZ_CP046327.1|WP_003429956.1|3942279_3942870_+|dipicolinate-synthase-subunit-B
MRLEGLTIGVGFTGSFCTYDKIFIELENLVKEGANVHTIFSDVSQNIDCRFGNSEEFMKKAYELTGNKPIVTIEEAEPFGPKGIADIIIIAPCTGNTAAKLANGITDSPVLMAAKGHLRNDKPLVISISTNDALSFNFKNIGILLNSKNIYFVPFGQDNCKAKPNSMIAHTELIIPTIELALENKQLQPVIKSPHQ
>NZ_CP046327.1|WP_009893748.1|3943077_3943278_-|hypothetical-protein
MKKLKTISIFSLIISVILTIGGIGIVTYYVDNLFIRGLSVFVLIMSSSFVSTTVRLIFEESKRYKF
>NZ_CP046327.1|WP_009891246.1|3943781_3946436_+|bifunctional-acetaldehyde-CoA/alcohol-dehydrogenase
MAHKEQVIIENKKENEVMSVGLDTVNNVESLVKKLAKIREAQKIFATYTQEQVDKIFLAASLAANKQRVPLAIMAQKETGMGIAEDKVIKNHYASEYIYNAYKETKTCGVIEKDEAFGMTKIAEPIGVIAAVVPTTNPTSTAIFKALLALKTRNGIIFSPHPRAKNSTIEAAKVVLEAAVLAGAPEGIIGWIDEPSLELTTTVMKEVDLTLATGGPGMVKSAYSSGKPAIGVGAGNTPAIIDESADIKTAVNSILVSKTFDNGMICASEQSVIVLENIYNEVKKEFKERGAYLLDKDETEKIRNIILVNGGLNSKIVGQTACTIAKLAGFEVPVDTKVLIGEVESVEIEEAFAHEKLSPVLAMYKASDFDNAVRKAEKLVEDGGFGHTSSLYIDDVNQREKLDKFTSAMKTCRILINTPSSQGGIGDLYNFKLAPSLTLGCGSWGGNSVSENVGVKHLLNIKTVAERRENMLWFRSPGKVYFKKGCLGVALKELKDVMNKKRAFIVTDTFLYNNGYTKAVTDLLDEMNIKHTTFFEVEPDPTLECAKIGAKAMREFNPDVIISIGGGSAMDAGKIMWTLYEHPDVDFQDLAMRFMDIRKRVYTFPKMGEKANFVAIPTSAGTGSEVTPFAVITDQDTGVKYPLADYELMPNMAIVDSDMMMNMPKSLTSASGIDALTHALEAYVSMLATDYTNGLALQAIKSIFEYLPRAYDNGAKDPEAREKMANASTMAGMAFANAFLGVCHSMAHKLGAFHHVPHGVANALLITEVMKFNSSDAPKKMGAFSQYKYPEALKRYAEIASFLGLKGNSDEEKFQSLLVAIEDLKLKVGIPKSIKEFGVEEPKFMDSIDEMVIQAFDDQCTGANPRYPLMNEIKDMYLNSYYGR
>NZ_CP046327.1|WP_009891236.1|3946711_3948931_+|EAL-domain-containing-protein
MTGRNKSFTLITILFLTSLFLTMGYIYIEDTKHLLMSEAKIHIKEVAVQGSQLAQRQIEKDLDVLNIFSNYYALNQDIPNEEKMKNLLDEMENQKFYTMAIVDINGNAENTKGDKFSVKDREFFKNSIKGKKYVSSPYVDEVNKSIKKITISVPLLNNDKVVGVLYCTYNINTLMKLINVSFYENNSISYVVRNDGTIILHPQEDSLSKNIYKLLKQDNDIREINRLKKELQENKTGATVLNMLEERRYLGYATMDNGNSENNYIKDWNLIFSIPETVVFSNSEQIINRAIYAVLFIILIFIAIIFYIIYIKKSNEKEILSLAYEDKVTHIGNQNKFYRECSKYLLDKPSLNYIIVYFDINNFKMINDTFGYEFGDNLLITIAKALKEELTEGEVYARLSSDYFAIFCDYKNGKNKRIRKIDSIRNNIESNLSIVFEISLCVGIYFVEEGEVDIQKAVNKANMARSVAKGKNINYAIYNEDVRNKLSEESMILDDIKIALVKNQFEVYYQPKFSLVTGEMIGSEALIRWNHPEHGFISPAVFIPIAEKSKLILKIGRFVFERVCNDLSEWKKQGKKIVPVSINLSRVELYQPDIVKFINKTIQMYNLSSDLIEIEITETVAINELNILKNVLNELRKYGFSISMDDFGTGYSSISCLRDMPIDILKLDKSFLNGIEHDERSRNIAKSIVSLAKSLDLVVIIEGVESKEQAELMKQFGCDLVQGFYFARPMPAKNFLDLL

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Crispr_ID: NZ_CP046327_14

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046327_14

4152093-4152183

Orphan

Consensus_repeat	Method
ATATGTTTAGAAGCTGTAAAAAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP046327_14

>merge|NZ_CP046327|14|4152093-4152183|CRISPRCasFinder
GTATGTATGGAAGCAGTAAAACAGACATATAAAGCTCTTAAGTATATAACAAATCAAAATGAGGATATTTGTATAGAAGCAGTAAAACAGA

>NZ_CP046327|14|13|4152093-4152183|CRISPRCasFinder
GTATGTATGGAAGCAGTAAAACAG	ACATATAAAGCTCTTAAGTATATAACAAATCAAAATGAGGAT
ATTTGTATAGAAGCAGTAAAACAGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046327.1\|WP_009893721.1\|4144337_4146071_+\|N-6-DNA-methylase	unknown	unknown	gnl\|CDD\|380294
NZ_CP046327.1\|WP_003422895.1\|4147705_4147966_+\|HPr-family-phosphocarrier-protein	unknown	unknown	gnl\|CDD\|376329
NZ_CP046327.1\|WP_009891014.1\|4148318_4150031_+\|phosphoenolpyruvate--protein-phosphotransferase	unknown	unknown	gnl\|CDD\|224006
NZ_CP046327.1\|WP_003426473.1\|4143899_4144298_+\|Rrf2-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224870
NZ_CP046327.1\|WP_003426450.1\|4161031_4161544_+\|adenine-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|235028
NZ_CP046327.1\|WP_003431793.1\|4146302_4147514_+\|patatin-like-phospholipase-family-protein	unknown	unknown	gnl\|CDD\|132848
NZ_CP046327.1\|WP_009893723.1\|4141129_4142035_+\|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl\|CDD\|119407
NZ_CP046327.1\|WP_009891001.1\|4164313_4164928_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293792
NZ_CP046327.1\|WP_003426457.1\|4154237_4154384_+\|cyclic-lactone-autoinducer-peptide	unknown	unknown	gnl\|CDD\|275064
NZ_CP046327.1\|WP_009891005.1\|4156891_4158556_+\|AarF/ABC1/UbiB-kinase-family-protein	unknown	unknown	gnl\|CDD\|223733
NZ_CP046327.1\|WP_003422884.1\|4140442_4141087_+\|di-trans,poly-cis-decaprenylcistransferase	unknown	unknown	gnl\|CDD\|259850
NZ_CP046327.1\|WP_004454135.1\|4158568_4161019_+\|single-stranded-DNA-specific-exonuclease-RecJ	unknown	unknown	gnl\|CDD\|273193
NZ_CP046327.1\|WP_009891003.1\|4163849_4164299_+\|D-tyrosyl-tRNA(Tyr)-deacylase	unknown	unknown	gnl\|CDD\|235383
NZ_CP046327.1\|WP_009891008.1\|4153629_4154208_+\|accessory-gene-regulator-B-family-protein	unknown	unknown	gnl\|CDD\|377395
NZ_CP046327.1\|WP_009891020.1\|4139833_4140304_-\|DUF4358-domain-containing-protein	unknown	unknown	gnl\|CDD\|379531
NZ_CP046327.1\|WP_009891012.1\|4150822_4151488_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046327.1\|WP_004454132.1\|4156096_4156594_+\|gamma-carbonic-anhydrase-family-protein	unknown	unknown	gnl\|CDD\|100051
NZ_CP046327.1\|WP_003422921.1\|4161617_4163825_+\|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|223394
NZ_CP046327.1\|WP_009893722.1\|4142349_4143897_+\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|238923
NZ_CP046327.1\|WP_003426456.1\|4154688_4156068_+\|thioether-cross-link-forming-SCIFF-peptide-maturase	unknown	unknown	gnl\|CDD\|274892

Protein	Function_ID	Function_description	E-value
NZ_CP046327.1\|WP_009893721.1\|4144337_4146071_+\|N-6-DNA-methylase	gnl\|CDD\|380294	NF033452, BREX_1_MTaseX, BREX-1 system adenine-specific DNA-methyltransferase PglX. This protein, PglX, is a site-specific DNA methyltransferase associated BREX (bacteriophage exclusion) type 1 systems. The phage resistance appears not to be through restriction-modification, as phage DNA appears not to get degraded, but it does manage to inhibit phage replication.	1.24468e-17
NZ_CP046327.1\|WP_003422895.1\|4147705_4147966_+\|HPr-family-phosphocarrier-protein	gnl\|CDD\|376329	pfam00381, PTS-HPr, PTS HPr component phosphorylation site.	1.66602e-32
NZ_CP046327.1\|WP_009891014.1\|4148318_4150031_+\|phosphoenolpyruvate--protein-phosphotransferase	gnl\|CDD\|224006	COG1080, PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism].	0
NZ_CP046327.1\|WP_003426473.1\|4143899_4144298_+\|Rrf2-family-transcriptional-regulator	gnl\|CDD\|224870	COG1959, COG1959, Predicted transcriptional regulator [Transcription].	4.93588e-10
NZ_CP046327.1\|WP_003426450.1\|4161031_4161544_+\|adenine-phosphoribosyltransferase	gnl\|CDD\|235028	PRK02304, PRK02304, adenine phosphoribosyltransferase; Provisional.	1.26188e-100
NZ_CP046327.1\|WP_003431793.1\|4146302_4147514_+\|patatin-like-phospholipase-family-protein	gnl\|CDD\|132848	cd07209, Pat_hypo_Ecoli_Z1214_like, Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.	2.241e-60
NZ_CP046327.1\|WP_009893723.1\|4141129_4142035_+\|N-acetylmuramoyl-L-alanine-amidase	gnl\|CDD\|119407	cd02696, MurNAc-LAA, N-acetylmuramoyl-L-alanine amidase or MurNAc-LAA (also known as peptidoglycan aminohydrolase, NAMLA amidase, NAMLAA, Amidase 3, and peptidoglycan amidase; EC 3.5.1.28) is an autolysin that hydrolyzes the amide bond between N-acetylmuramoyl and L-amino acids in certain cell wall glycopeptides. These proteins are Zn-dependent peptidases with highly conserved residues involved in cation co-ordination. MurNAc-LAA in this family is one of several peptidoglycan hydrolases (PGHs) found in bacterial and bacteriophage or prophage genomes that are involved in the degradation of the peptidoglycan. In Escherichia coli, there are five MurNAc-LAAs present: AmiA, AmiB, AmiC and AmiD that are periplasmic, and AmpD that is cytoplasmic. Three of these (AmiA, AmiB and AmiC) belong to this family, the other two (AmiD and AmpD) do not. E. coli AmiA, AmiB and AmiC play an important role in cleaving the septum to release daughter cells after cell division. In general, bacterial MurNAc-LAAs are members of the bacterial autolytic system and carry a signal peptide in their N-termini that allows their transport across the cytoplasmic membrane. However, the bacteriophage MurNAc-LAAs are endolysins since these phage-encoded enzymes break down bacterial peptidoglycan at the terminal stage of the phage reproduction cycle. As opposed to autolysins, almost all endolysins have no signal peptides and their translocation through the cytoplasmic membrane is thought to proceed with the help of phage-encoded holin proteins. The amidase catalytic module is fused to another functional module (cell wall binding module or CWBM) either at the N- or C-terminus, which is responsible for high affinity binding of the protein to the cell wall.	1.29695e-72
NZ_CP046327.1\|WP_009891001.1\|4164313_4164928_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293792	cd06262, metallo-hydrolase-like_MBL-fold, mainly hydrolytic enzymes and related proteins which carry out various biological functions; MBL-fold metallohydrolase domain. Members of the MBL-fold metallohydrolase superfamily are mainly hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) for which this fold was named perform only a small fraction of the activities included in this superfamily. Activities carried out by superfamily members include class B beta-lactamases which can catalyze the hydrolysis of a wide range of beta-lactam antibiotics, hydroxyacylglutathione hydrolases (also called glyoxalase II) which hydrolyze S-d-lactoylglutathione to d-lactate in the second step of the glycoxlase system, AHL lactonases which catalyze the hydrolysis and opening of the homoserine lactone rings of acyl homoserine lactones (AHLs), persulfide dioxygenase which catalyze the oxidation of glutathione persulfide to glutathione and persulfite in the mitochondria, flavodiiron proteins which catalyze the reduction of oxygen and/or nitric oxide to water or nitrous oxide respectively, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J which has both 5'-3' exoribonucleolytic and endonucleolytic activity and ribonuclease Z which catalyzes the endonucleolytic removal of the 3' extension of the majority of tRNA precursors, cyclic nucleotide phosphodiesterases which decompose cyclic adenosine and guanosine 3', 5'-monophosphate (cAMP and cGMP) respectively, insecticide hydrolases, and proteins required for natural transformation competence. The diversity of biological roles is reflected in variations in the active site metallo-chemistry, for example classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, human persulfide dioxygenase ETHE1 is a mono-iron binding member of the superfamily; Arabidopsis thaliana hydroxyacylglutathione hydrolases incorporates iron, manganese, and zinc in its dinuclear metal binding site, and flavodiiron proteins contains a diiron site.	8.82071e-73
NZ_CP046327.1\|WP_003426457.1\|4154237_4154384_+\|cyclic-lactone-autoinducer-peptide	gnl\|CDD\|275064	TIGR04223, quorum_AgrD, cyclic lactone autoinducer peptide. Members of this family of short peptides are precursors to thiolactone (unless Cys is replaced by Ser) cyclic autoinducer peptides, used in quorum-sensing systems in Gram-positive bacteria. The best characterized is the AgrD precursor, processed by the AgrB protein. Nearby proteins regularly encountered include a histidine kinase and a response regulator. This model is related to pfam05931 but is newer and currently broader in scope.	4.07974e-08
NZ_CP046327.1\|WP_009891005.1\|4156891_4158556_+\|AarF/ABC1/UbiB-kinase-family-protein	gnl\|CDD\|223733	COG0661, AarF, Predicted unusual protein kinase [General function prediction only].	1.07824e-141
NZ_CP046327.1\|WP_003422884.1\|4140442_4141087_+\|di-trans,poly-cis-decaprenylcistransferase	gnl\|CDD\|259850	cd00475, Cis_IPPS, Cis (Z)-Isoprenyl Diphosphate Synthases. Cis (Z)-Isoprenyl Diphosphate Synthases (cis-IPPS) catalyze the successive 1'-4 condensation of the isopentenyl diphosphate (IPP) molecule to trans,trans-farnesyl diphosphate (FPP) or to cis,trans-FPP to form long-chain polyprenyl diphosphates. A few can also catalyze the condensation of IPP to trans-geranyl diphosphate to form the short-chain cis,trans- FPP. In prokaryotes, the cis-IPPS, undecaprenyl diphosphate synthase (UPP synthase), catalyzes the formation of the carrier lipid UPP in bacterial cell wall peptidoglycan biosynthesis. Similarly, in eukaryotes, the cis-IPPS, dehydrodolichyl diphosphate (dedol-PP) synthase catalyzes the formation of the polyisoprenoid glycosyl carrier lipid dolichyl monophosphate. cis-IPPS form homodimers and are mechanistically and structurally distinct from trans-IPPS, which lack the DDXXD motifs, yet require Mg2+ for activity.	1.5916e-60
NZ_CP046327.1\|WP_004454135.1\|4158568_4161019_+\|single-stranded-DNA-specific-exonuclease-RecJ	gnl\|CDD\|273193	TIGR00644, recJ, single-stranded-DNA-specific exonuclease RecJ. All proteins in this family are 5'-3' single-strand DNA exonucleases. These proteins are used in some aspects of mismatch repair, recombination, and recombinational repair. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP046327.1\|WP_009891003.1\|4163849_4164299_+\|D-tyrosyl-tRNA(Tyr)-deacylase	gnl\|CDD\|235383	PRK05273, PRK05273, D-tyrosyl-tRNA(Tyr) deacylase; Provisional.	9.42808e-98
NZ_CP046327.1\|WP_009891020.1\|4139833_4140304_-\|DUF4358-domain-containing-protein	gnl\|CDD\|379531	pfam14270, DUF4358, Domain of unknown function (DUF4358). This domain family is found in bacteria, and is approximately 110 amino acids in length.	1.1053e-05
NZ_CP046327.1\|WP_009891008.1\|4153629_4154208_+\|accessory-gene-regulator-B-family-protein	gnl\|CDD\|377395	pfam04647, AgrB, Accessory gene regulator B. The arg locus consists of two transcripts: RNAII and RNAIII. RNAII encodes four genes (agrA, B, C, and D) whose gene products assemble a quorum sensing system. AgrB and AgrD are essential for the production of the autoinducing peptide which functions as a signal for quorum sensing. AgrB is a transmembrane protein.	9.56397e-22
NZ_CP046327.1\|WP_004454132.1\|4156096_4156594_+\|gamma-carbonic-anhydrase-family-protein	gnl\|CDD\|100051	cd04645, LbH_gamma_CA_like, Gamma carbonic anhydrase-like: This family is composed of gamma carbonic anhydrase (CA), Ferripyochelin Binding Protein (FBP), E. coli paaY protein, and similar proteins. CAs are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism, involving the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide, followed by the regeneration of the active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. They are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionary distinct groups - alpha, beta and gamma carbonic anhydrases - which show no significant sequence identity or structural similarity. Gamma CAs are trimeric enzymes with left-handed parallel beta helix (LbH) structural domain.	6.21398e-81
NZ_CP046327.1\|WP_003422921.1\|4161617_4163825_+\|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase	gnl\|CDD\|223394	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription].	0
NZ_CP046327.1\|WP_009893722.1\|4142349_4143897_+\|EAL-domain-containing-protein	gnl\|CDD\|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	2.0607e-89
NZ_CP046327.1\|WP_003426456.1\|4154688_4156068_+\|thioether-cross-link-forming-SCIFF-peptide-maturase	gnl\|CDD\|274892	TIGR03974, six-Cys-in-45_modification_radical_SAM_protein, SCIFF radical SAM maturase. Members of this protein family are predicted radical SAM enzymes universally associated with Six Cysteines in Forty-Five protein, or SCIFF (family TIGR03973), a predicted ribosomal natural product precursor that is nearly universal in the class Clostridia. Similarity of this family to radical SAM maturases (PqqE and subtilosin A maturase) found in the vicinity of other peptide precursors suggests this protein is the SCIFF radical SAM maturase. [Cellular processes, Biosynthesis of natural products].	0

>NZ_CP046327.1|WP_009891012.1|4150822_4151488_-|hypothetical-protein
MKGNIVQYNFADIEEEVYSLDYAIAWNTDEENVNIIPFTNKFCKESIESFCLGKINNFVEILNEGFVENHHYVHLDKMISVPKKKVNLVYQQDTHGYLLRDDNDNLIPAKITSEQSKSISSKMELFCAGEEKCLINILLKADPSYILDVDSIKDKNILNLGYESIDRYKEYNFDDDKILIFFINKKRYSVIMKKTNNSDNDLVSRNNAIKELFTNKAGNLN
>NZ_CP046327.1|WP_009891014.1|4148318_4150031_+|phosphoenolpyruvate--protein-phosphotransferase
MAYKGIGASPGVALGKALVVEHSELVIEKKSIDNVEAEIAKLEDAVAVSKEELVKVKEKASEELGAEEAEIFEAHLLVLEDPELIGSAIDKIKTESVNAEYALNEIKEMFVSMFESMDNEYMKERAADIKDVTNRILRHILGIKVVDLSALSEEVVLIAHDLTPSDTATMNKKMVLGFLTDIGGRTSHTAIMSRTLEIAAIVGLNDITSKVKDGDFVVFNGDTGEVIVNPDEETINKYTELKAKYEDERKALQLLKGKPSVTLDGKHVELAGNIGTPNDIEGLIKNDAEGVGLYRTEFLYMDRDSFPTEEIQYEAYKAVLEGMDGKPIVIRTLDIGGDKELSYLSMEPEMNPFLGYRAIRLCLDRKDIFKTQLRALYRASIHGRLRIMFPMISSLEELLQAKEVVKEVLAELDSEGVAYAKDVEIGMMIEVPSAAVISDVLAKHVDFFSIGTNDLIQYTCAVDRMNQKISYLYNQFNPAVLRLIKTVIDNAHKEGKWAGMCGESAGDQKMIPILLGMGLDEFSMSPISILPARKLITSVKESDMKKLADDVLNMGTAEEIKSYIEKTFNI
>NZ_CP046327.1|WP_003422895.1|4147705_4147966_+|HPr-family-phosphocarrier-protein
MEKVVSIKNASGLHARPAGMFVKKAAEFKSTVEVVAKDKTVNAKSIMGIMSLGLAQGEELKLVVNGEDEEVALAAMVELVESGFGE
>NZ_CP046327.1|WP_003431793.1|4146302_4147514_+|patatin-like-phospholipase-family-protein
MKGLVLEGGGTKGAYQIGAYKALRELGIEFQGVTGTSIGALNGAYIIQNDIEVMEDIWLNYDYTHFMNIDRETYERFKNVDFTTKNLNAVFELINKARKNEGIDISPLRQLMETTLNEDIIRKSKKDFGLVTVWWDKKINPYPLYIEDIPKGRLIDYLIASSSLPIFQTNMMDDKLYLDGMFCDNMPIGLLEDKGYEDVVVIRLIDDFIGKMNLNRHQNINIKTIIPSEYLGGSLNKDRDNVEKNIRLGYLDTMKAYERCTGIKYYFDVEYKYNEEYCFDKFRSMSNETIQYICNLLNIKRDASLRTVMESVIPKLGEVLGLPKDFSYKDLFYCIYEKKLEENNINRIKLYDFNKVIDVVNTNIDSNRNLASNFEVRPKISIKKNKNTKLLTNCIIKDIKNQS
>NZ_CP046327.1|WP_009893721.1|4144337_4146071_+|N-6-DNA-methylase
MDDISQDNFLLSKEYENSLDVDTKKASGIYYTPKIIVDYIVKKTLKNHDIIKNPYPRILDISCGCGNFLLEVYDILYDLFEENIYELKKKYDENYWTVDNIHRHILNYCIYGADIDEKAISILKDSLTNKKVVNDLDESDIKINLFCCDSLKKKWRYKFDYIVGNPPYIGHKKLEKKYKKFLLEKYSEVYKDKADLYFCFYKKIIDILKQGGVGSVITPRYFLESLSGKDLREYIKSNVNVQEIVDFLGANIFKNIGVSSCILTFDKKKTKETYIDVFKIKNEDICINKFETLEELLKSSKFEHFNINQRLLSDEWILVNKDDETFYNKIQEKCKYSLEDIAISFQGIITGCDKAFILSKDDVKLNLVDDKFLKCWIKSKNINKYIVDKSEYRLIYSNDIDNENTNKKILDEIIGLYKTKLENRRECKSGIRKWYELQWGREKLFFERKKIMYPYKSNENRFAIDYDNNFSSADVYSFFIKEEYLDKFSYEYLVGILNSSVYDKYFKITAKKMSKNIYDYYPNKVMKIRIFRDNNYEEIENLSKQIISILLNKSIDKGKVEKLQIKMDNLIMDSLGI
>NZ_CP046327.1|WP_003426473.1|4143899_4144298_+|Rrf2-family-transcriptional-regulator
MISEDVDYSIRIIRAIFNNGEDKPIDAKMILKSEDIPILTLYRLLRKLCANNILTFNKEDGKTYMLNVSLDTISLRTIVEVIDGKIYINKCTRYVSNCSNCLKGCKVNRELLEIEKEIYKLLSRKSIRQILE
>NZ_CP046327.1|WP_009893722.1|4142349_4143897_+|EAL-domain-containing-protein
MNKNSMTKIYSLNKIIFIIIGILGIVLLTRHIEVDIKVLILILLTLFSINVFISYLKIKLYEDKINLGLINNSDKFINITKDENFLKHVQNYIISNEKENCVMACFDLCRLKLINDIYGYELGDEVLNNILSNLKNYFGKEAIYGKLKSDVFVLIIKLENREQKIPYLVNLIKNKIMILSQIDSFKMDINIEASIGIYKFNNNEIDIKKAIDNADMARLKSKGLKHIEYVEFDNAMEEEIQSIMKIERDLFLAIKNKEFVIHYQPKVDSSTGNIIGSEALIRWLHPSLGMVGPNKFIPIAEKNGLINNIGRWLIQEVFITINKWISEGINVLPVSINLSRVELYKNDLVDFFKLMFNTYNIPKELIELEITETTALRDVKFISERLYEIKSLGMNISLDDFGVGNSNFINLKGIPLDIIKIDRSLILDIVTNTKTKFMVKAIINLSHDLNVTVICEGVEDMHQVKVLSELGCNFIQGYVFFKPLDEMNYKKLLTDGSYINLKDTLLDKCMTVEEE
>NZ_CP046327.1|WP_009893723.1|4141129_4142035_+|N-acetylmuramoyl-L-alanine-amidase
MKKKLLDGKITLIICKSVKIYTKKGEEMSKGNNNNNSRNKSKKTSHLNRKKRKLNKKKLAVLICFTVLFLFIAFKATQGVVALVKSMDKSNKTSQQQKVNSEQFDLGNEEENKKKKYTVFIDPGHGGNDKGTESKTSNRYEKDLNLQIAKKLANKLSKQKDIQVVVSRTDDTYISLKDRAILANNSSADVLVSIHLNAEKNGNTATGIETWYRNKATDGSKELAQTVQSTIVSYVKVRDRGIVENNFEVLRESNMPAILIECGFLTTPSEEQKIINEKYQDQLAEGIVQGVLSYLDSKGNK
>NZ_CP046327.1|WP_003422884.1|4140442_4141087_+|di-trans,poly-cis-decaprenylcistransferase
MRIPKHVGIIPDGNRRWASQNGMTKDKGYESGIDPGLESYRLCRDLGCEEVTFYGFTTDNTRRPSVQTKAFTKACIDAANILIDEGAALLVVGNTKSPMFPEELLPYTNRIKAKEGQIKANLLVNYGWYWDLNNISGVENVNKNNIQDYIQSFDVSRLDLIIRWGGRRRLSGFLPVQSIYADFYVIDNYWPDFKSDDIKDAFSWYDTQDVTLGG
>NZ_CP046327.1|WP_009891020.1|4139833_4140304_-|DUF4358-domain-containing-protein
MKKILILFFSIILSLGMVSCSSSGDYKNVSTSKIKKALKSSDLLIKESKIFDAKDFNYFNDVEEDIIQGFVINSSEKLSLEDIIVIKTDEVDKIYKTLENYKKDMIQAPFGEGHGEKINSEIANNTIIEKAGRYVYLISAENATQIENKILNIIKK
>NZ_CP046327.1|WP_009891008.1|4153629_4154208_+|accessory-gene-regulator-B-family-protein
MFKRYAEKMTSVLICNNMIDNNESKVYSYGFEILIAFIVNITTMLFIGFLFGKFTYVLFFLMCYCPIRQFSGGYHADNYFRCLLTFIFIILSTILIIENINIDLFKNIIMIIASVSWVGICVLCPIEHRSNPISDREKFVYKKTAIFISTVVLLITILSLSLSIFVDYFTYSAFAMFWIFVMLVLGKLKAKV
>NZ_CP046327.1|WP_003426457.1|4154237_4154384_+|cyclic-lactone-autoinducer-peptide
MKKFIVRFMKFASSLALSTAILSANSTCPWIIHQPKVPKEISNLKKTN
>NZ_CP046327.1|WP_003426456.1|4154688_4156068_+|thioether-cross-link-forming-SCIFF-peptide-maturase
MSMIHKFSMNGYNIVLDVNGGAVHVLDDVAYDLLDFYKEKSKEEILEILKSKYQEEKINEAYEEILNLEKEGLLYTEDTYQYHPSFVHREPVVKALCLNVAHDCNLKCKYCFAAQGDFGGEKELMSFEVGKAAIDYLIANSGSRKNLEIDFFGGEPLMNFEVVKQLVDYGRSVEKDYNKNIRFTITTNGVLLNDEIIDYINENMHNVVLSLDGRKEVNDNMRPTLNDKGSYDITLPRFKKLVEKRAKDKYYYIRGTFTRDNLDFSKDVMHFADLGFKLTSVEPVVGDESNPYALREEDLPKIFEEYEKFAVEYADRQLQGDGFKFFHFMIDLNQGPCVIKRITGCGAGNEYLSVTPNGDIYPCHQFVGNEEFKMANIFDEEIVLPENLKNMFREAHVYTKEECKQCWNKFYCSGGCHANAINFNNDISKPYELGCEMQRKRTECSIMIQAKLMLEGATN
>NZ_CP046327.1|WP_004454132.1|4156096_4156594_+|gamma-carbonic-anhydrase-family-protein
MIRDYLEDKPLIDESVFVAKSADVIGNVKIGKDSSIWYNAVVRGDEGPITIGENTNIQDCSIVHGDTETIIGNNVTVGHRSIVHGCKISDNVLIGMGSIILDNAEIGEYTLIGAGTLITSNKKFPPGVLIMGSPGKVVRELTEEDKKYIDESYEWYLEAAQNQKY
>NZ_CP046327.1|WP_009891005.1|4156891_4158556_+|AarF/ABC1/UbiB-kinase-family-protein
MRISYRNLKRYREIGYVLIKYGFSFIVERLNIEGIAYKIPLFDPPEEIKNMTTGERMKRVLEELGPTYIKIGQILSTRKDLLDQDIIDEISKLRDDVEKFDSNIAIDIFKEEVGLSIEEIFLEFKEEPIAAASIGQVYEGVLKTGEEVIVKIQRPNIEKIIKSDLEILRTIANTLKDLKKDFNLDLVQMIEEFQTQLMRELDYTFEAINATKFSRIFKNSDEVYIPKVYSEYNTKKILVMEKVNGTKLSDVEKIRRLGYNTKTIVEIGVRSFFTQVLSHGFFHADPHPGNIFVVAKNKIAYIDFGMIGIIDNKTLNQLNEIALAGVEKNVDKIIYLLIEMDALNGEADIKGLRQDLLYLIHYYYDISIEKINVTDILNELFRFFRQYKIVMPAQFVTLAKTVITLEGTSRTLNTDFSFGSMGKEFMKHHYKSKFNPKNVVLSSRQNVEEILLDIKTIPKQLKAILKNIERNNIKMQIEDVKMTRLENCIIELTSQISLSLVLASIIVGSSLIIASPNIENNIWIKFTAIAGFFISFIIGLCLVIRSIRSKYKKD
>NZ_CP046327.1|WP_004454135.1|4158568_4161019_+|single-stranded-DNA-specific-exonuclease-RecJ
MKKWILKYKGKIEESEFSKKLNISPEICQILKNRGICTEKDSEIFMNPSLDYLRDPFLMKDMQKAVDRIKLAVEKNEKIWIYGDYDVDGVSSTSILCLYFKSIGYNVDYYIPNRLEEGYGINEDAIKLISSRGCDLIISVDCGITSVSEVNTANDLGIDVIITDHHECQSEIPSAFAVINPKQEDCNYPFDSLCGCGVAFKMIQALTPKEEFKTSMYNYLEIVTLATICDIVPLIDENRIIVKNGLKSMKEGKNIGLRELIKVCGVESDKIGSSHIGFAIGPRINASGRLGYSYLGVELFTTQSQEEAVEIASILEEKNNERQMIEAKMYHEAEEMLKSNSRYNDDKVLVLAKEGWQHGIIGIVASKLTEKYYKPTILLGIENGEATGSARSIKGFNIFEALIKCKDLMTKFGGHEQAAGLSLDSDNVEILANEINKFADYNLTEDDMIENVNVEFELQENVINLNLVEELHKLEPFGLNNPNPRFIVRNYILKDLKVIGKNQQHLKLSIEKEKSYECIGFNMSHLKSMYKVGDKVDVLFQLDENNYMGNRKVQFLLKDIRLARPKSASNDKLSLKLMSKIIPKDTQSLYNISVSDFELFDGNTDINIFDYFEKDTLIISNSINGFYRAMSDISLIDLDFNINYNIIEDVSKNTDKLELIFSPNIDKIDLKRYNNIILYDYLYNKGEYSYIYENKREESEIIKYYNKTDLLYLKNVVSNIVPSRDEFITIYKQALIKKEIDLDMVNIRETFNVIPLKFFTILNVFRELNLLDFNLNYEKNSVLIRILPKPQKKLDLNESLILNNLKNLEKQYNSSY
>NZ_CP046327.1|WP_003426450.1|4161031_4161544_+|adenine-phosphoribosyltransferase
MDLKNFIRNIDDFPKPGIDFKDVTTLFKDGDAFKYAVDSIVEELKDKDVDLVIGPEARGFLMGTPVAYALGVGFVPIRKPGKLPGEVESYEYGLEYGTDTLEIHKDAIKKGQKVAIVDDLLATGGTMEAAAKLVEKLGGEVVSMQFLIELKFLNGREKLSNYDVNSLIKY
>NZ_CP046327.1|WP_003422921.1|4161617_4163825_+|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase
MHDKELQEIIEKIKVYAPNANFEMVEKAYNLAKKAHEGQYRKSGEPYFIHPLAVANILIEMELDIETITAGLLHDVVEDTEYTYEDIKKEFGKEVADLVDGVTKLGQIKYRSKEETQSENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYMPPEKAKYKAKETLEIYGGIAHRLGISKIKWELEDRALRFMDPEGYYDLVSRVSMKRSQREDYIQGIVELLKDKFKDLSIPCDVYGRPKHFYSIYRKMQKKHKTFEEIFDLTAVRILVDNVKDCYAVLGIVHTLWRPIPGRFKDYIAMPKPNMYQSLHTTVVGPDGEPLEIQIRTHEMHNIAENGIAAHWKYKEGISSKESKVEEKLQWLRQMMEWEKDLKDPQEFMDALKEDVFNSQVYVFTPKGDVIELPAESTPIDFAYRVHTNVGNKCVGAKIDGRIVPIDYKLQNGNIVEVLTSSNSNGPSRDWLNIVKTPNAKSRIRQFFKKERREENVDRGNTILEREFKKHDIPQKDPLVEKYMALVAKKFNQPSVEDLIATVGYGGIMSSQVVSKVKDLYLKEVKKAKKEQQIQEEDLNKHNISETEYSKKRKKNASQGIIVKGLDNILVRFAKCCNPLPGDEIVGYITKGRGVAIHRADCPNANNNGDFFQNRLVEVSWSSAGKGKFEAEIQIKAIDRRGIVNEITHIVAMDKLSLNGINARKGKDSIVSINLLVEVNDTEELKILMKKLKAIPGVESIYRMTN
>NZ_CP046327.1|WP_009891003.1|4163849_4164299_+|D-tyrosyl-tRNA(Tyr)-deacylase
MRAVVQRVSSSKVTVDENTIGQINKGLLVLLGVTHDDKSSDVDYMIDKILNLRIFEDENDKMNLSLMDIGGELLVVSQFTLYGDCRKGRRPGFSNASRPELANNLYEEFVKKAKDKGVTVGTGQFAAHMMVELTNDGPVTILLDSSKSF
>NZ_CP046327.1|WP_009891001.1|4164313_4164928_+|MBL-fold-metallo-hydrolase
MIIKKFVDSYFGVNTYVLGDEKTKKCAVIDPGGSLVETLSFVKENELNIEYIILTHGHGDHIGYVKDIKEKTGAKVVAHVDEKELLNDKNKNLSYTMRCGAQEFDADIYVSDKDKLELGELKMTFLHTPGHTQGCMCIRVEDEMFTGDTLFAGSIGRTDLYSGDFNQMEKSLKKLCKYEDAVRVYPGHGPTSTLGVEKKTNPYM

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Crispr_ID: NZ_CP046327_16

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046327_16

4152783-4152956

Orphan

Consensus_repeat	Method
ATATGTTTAGAAGCTGTAAAAAAA	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP046327_16

>merge|NZ_CP046327|16|4152783-4152956|CRISPRCasFinder
ATATGTATAGAAGCAGTAAGAGGTTCATTTGAAGAACTTGAAATAAAAGAAATATTAAGTTATGTAAAGATACCAACAGAAAGAATATTTGTAGAAGCAGTAAAGCAAAATGGAAAAATTCTTAAATATGTAGAAAATCAGACAGAATTAATATGTTTAGAGGCAGTAAGAGAA

>NZ_CP046327|16|15|4152783-4152956|CRISPRCasFinder
ATATGTATAGAAGCAGTAAGAGGT	TCATTTGAAGAACTTGAAATAAAAGAAATATTAAGTTATGTAAAGATACCAACAGAAAGA
ATATTTGTAGAAGCAGTAAAGCAA	AATGGAAAAATTCTTAAATATGTAGAAAATCAGACAGAATTA
ATATGTTTAGAGGCAGTAAGAGAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046327.1\|WP_009893721.1\|4144337_4146071_+\|N-6-DNA-methylase	unknown	unknown	gnl\|CDD\|380294
NZ_CP046327.1\|WP_003422895.1\|4147705_4147966_+\|HPr-family-phosphocarrier-protein	unknown	unknown	gnl\|CDD\|376329
NZ_CP046327.1\|WP_009891014.1\|4148318_4150031_+\|phosphoenolpyruvate--protein-phosphotransferase	unknown	unknown	gnl\|CDD\|224006
NZ_CP046327.1\|WP_003426473.1\|4143899_4144298_+\|Rrf2-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224870
NZ_CP046327.1\|WP_003426450.1\|4161031_4161544_+\|adenine-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|235028
NZ_CP046327.1\|WP_003431793.1\|4146302_4147514_+\|patatin-like-phospholipase-family-protein	unknown	unknown	gnl\|CDD\|132848
NZ_CP046327.1\|WP_009893723.1\|4141129_4142035_+\|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl\|CDD\|119407
NZ_CP046327.1\|WP_009891001.1\|4164313_4164928_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293792
NZ_CP046327.1\|WP_003426457.1\|4154237_4154384_+\|cyclic-lactone-autoinducer-peptide	unknown	unknown	gnl\|CDD\|275064
NZ_CP046327.1\|WP_009891005.1\|4156891_4158556_+\|AarF/ABC1/UbiB-kinase-family-protein	unknown	unknown	gnl\|CDD\|223733
NZ_CP046327.1\|WP_003422884.1\|4140442_4141087_+\|di-trans,poly-cis-decaprenylcistransferase	unknown	unknown	gnl\|CDD\|259850
NZ_CP046327.1\|WP_004454135.1\|4158568_4161019_+\|single-stranded-DNA-specific-exonuclease-RecJ	unknown	unknown	gnl\|CDD\|273193
NZ_CP046327.1\|WP_009891003.1\|4163849_4164299_+\|D-tyrosyl-tRNA(Tyr)-deacylase	unknown	unknown	gnl\|CDD\|235383
NZ_CP046327.1\|WP_009891008.1\|4153629_4154208_+\|accessory-gene-regulator-B-family-protein	unknown	unknown	gnl\|CDD\|377395
NZ_CP046327.1\|WP_009891020.1\|4139833_4140304_-\|DUF4358-domain-containing-protein	unknown	unknown	gnl\|CDD\|379531
NZ_CP046327.1\|WP_009891012.1\|4150822_4151488_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046327.1\|WP_004454132.1\|4156096_4156594_+\|gamma-carbonic-anhydrase-family-protein	unknown	unknown	gnl\|CDD\|100051
NZ_CP046327.1\|WP_003422921.1\|4161617_4163825_+\|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|223394
NZ_CP046327.1\|WP_009893722.1\|4142349_4143897_+\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|238923
NZ_CP046327.1\|WP_003426456.1\|4154688_4156068_+\|thioether-cross-link-forming-SCIFF-peptide-maturase	unknown	unknown	gnl\|CDD\|274892

Protein	Function_ID	Function_description	E-value
NZ_CP046327.1\|WP_009893721.1\|4144337_4146071_+\|N-6-DNA-methylase	gnl\|CDD\|380294	NF033452, BREX_1_MTaseX, BREX-1 system adenine-specific DNA-methyltransferase PglX. This protein, PglX, is a site-specific DNA methyltransferase associated BREX (bacteriophage exclusion) type 1 systems. The phage resistance appears not to be through restriction-modification, as phage DNA appears not to get degraded, but it does manage to inhibit phage replication.	1.24468e-17
NZ_CP046327.1\|WP_003422895.1\|4147705_4147966_+\|HPr-family-phosphocarrier-protein	gnl\|CDD\|376329	pfam00381, PTS-HPr, PTS HPr component phosphorylation site.	1.66602e-32
NZ_CP046327.1\|WP_009891014.1\|4148318_4150031_+\|phosphoenolpyruvate--protein-phosphotransferase	gnl\|CDD\|224006	COG1080, PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism].	0
NZ_CP046327.1\|WP_003426473.1\|4143899_4144298_+\|Rrf2-family-transcriptional-regulator	gnl\|CDD\|224870	COG1959, COG1959, Predicted transcriptional regulator [Transcription].	4.93588e-10
NZ_CP046327.1\|WP_003426450.1\|4161031_4161544_+\|adenine-phosphoribosyltransferase	gnl\|CDD\|235028	PRK02304, PRK02304, adenine phosphoribosyltransferase; Provisional.	1.26188e-100
NZ_CP046327.1\|WP_003431793.1\|4146302_4147514_+\|patatin-like-phospholipase-family-protein	gnl\|CDD\|132848	cd07209, Pat_hypo_Ecoli_Z1214_like, Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.	2.241e-60
NZ_CP046327.1\|WP_009893723.1\|4141129_4142035_+\|N-acetylmuramoyl-L-alanine-amidase	gnl\|CDD\|119407	cd02696, MurNAc-LAA, N-acetylmuramoyl-L-alanine amidase or MurNAc-LAA (also known as peptidoglycan aminohydrolase, NAMLA amidase, NAMLAA, Amidase 3, and peptidoglycan amidase; EC 3.5.1.28) is an autolysin that hydrolyzes the amide bond between N-acetylmuramoyl and L-amino acids in certain cell wall glycopeptides. These proteins are Zn-dependent peptidases with highly conserved residues involved in cation co-ordination. MurNAc-LAA in this family is one of several peptidoglycan hydrolases (PGHs) found in bacterial and bacteriophage or prophage genomes that are involved in the degradation of the peptidoglycan. In Escherichia coli, there are five MurNAc-LAAs present: AmiA, AmiB, AmiC and AmiD that are periplasmic, and AmpD that is cytoplasmic. Three of these (AmiA, AmiB and AmiC) belong to this family, the other two (AmiD and AmpD) do not. E. coli AmiA, AmiB and AmiC play an important role in cleaving the septum to release daughter cells after cell division. In general, bacterial MurNAc-LAAs are members of the bacterial autolytic system and carry a signal peptide in their N-termini that allows their transport across the cytoplasmic membrane. However, the bacteriophage MurNAc-LAAs are endolysins since these phage-encoded enzymes break down bacterial peptidoglycan at the terminal stage of the phage reproduction cycle. As opposed to autolysins, almost all endolysins have no signal peptides and their translocation through the cytoplasmic membrane is thought to proceed with the help of phage-encoded holin proteins. The amidase catalytic module is fused to another functional module (cell wall binding module or CWBM) either at the N- or C-terminus, which is responsible for high affinity binding of the protein to the cell wall.	1.29695e-72
NZ_CP046327.1\|WP_009891001.1\|4164313_4164928_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293792	cd06262, metallo-hydrolase-like_MBL-fold, mainly hydrolytic enzymes and related proteins which carry out various biological functions; MBL-fold metallohydrolase domain. Members of the MBL-fold metallohydrolase superfamily are mainly hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) for which this fold was named perform only a small fraction of the activities included in this superfamily. Activities carried out by superfamily members include class B beta-lactamases which can catalyze the hydrolysis of a wide range of beta-lactam antibiotics, hydroxyacylglutathione hydrolases (also called glyoxalase II) which hydrolyze S-d-lactoylglutathione to d-lactate in the second step of the glycoxlase system, AHL lactonases which catalyze the hydrolysis and opening of the homoserine lactone rings of acyl homoserine lactones (AHLs), persulfide dioxygenase which catalyze the oxidation of glutathione persulfide to glutathione and persulfite in the mitochondria, flavodiiron proteins which catalyze the reduction of oxygen and/or nitric oxide to water or nitrous oxide respectively, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J which has both 5'-3' exoribonucleolytic and endonucleolytic activity and ribonuclease Z which catalyzes the endonucleolytic removal of the 3' extension of the majority of tRNA precursors, cyclic nucleotide phosphodiesterases which decompose cyclic adenosine and guanosine 3', 5'-monophosphate (cAMP and cGMP) respectively, insecticide hydrolases, and proteins required for natural transformation competence. The diversity of biological roles is reflected in variations in the active site metallo-chemistry, for example classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, human persulfide dioxygenase ETHE1 is a mono-iron binding member of the superfamily; Arabidopsis thaliana hydroxyacylglutathione hydrolases incorporates iron, manganese, and zinc in its dinuclear metal binding site, and flavodiiron proteins contains a diiron site.	8.82071e-73
NZ_CP046327.1\|WP_003426457.1\|4154237_4154384_+\|cyclic-lactone-autoinducer-peptide	gnl\|CDD\|275064	TIGR04223, quorum_AgrD, cyclic lactone autoinducer peptide. Members of this family of short peptides are precursors to thiolactone (unless Cys is replaced by Ser) cyclic autoinducer peptides, used in quorum-sensing systems in Gram-positive bacteria. The best characterized is the AgrD precursor, processed by the AgrB protein. Nearby proteins regularly encountered include a histidine kinase and a response regulator. This model is related to pfam05931 but is newer and currently broader in scope.	4.07974e-08
NZ_CP046327.1\|WP_009891005.1\|4156891_4158556_+\|AarF/ABC1/UbiB-kinase-family-protein	gnl\|CDD\|223733	COG0661, AarF, Predicted unusual protein kinase [General function prediction only].	1.07824e-141
NZ_CP046327.1\|WP_003422884.1\|4140442_4141087_+\|di-trans,poly-cis-decaprenylcistransferase	gnl\|CDD\|259850	cd00475, Cis_IPPS, Cis (Z)-Isoprenyl Diphosphate Synthases. Cis (Z)-Isoprenyl Diphosphate Synthases (cis-IPPS) catalyze the successive 1'-4 condensation of the isopentenyl diphosphate (IPP) molecule to trans,trans-farnesyl diphosphate (FPP) or to cis,trans-FPP to form long-chain polyprenyl diphosphates. A few can also catalyze the condensation of IPP to trans-geranyl diphosphate to form the short-chain cis,trans- FPP. In prokaryotes, the cis-IPPS, undecaprenyl diphosphate synthase (UPP synthase), catalyzes the formation of the carrier lipid UPP in bacterial cell wall peptidoglycan biosynthesis. Similarly, in eukaryotes, the cis-IPPS, dehydrodolichyl diphosphate (dedol-PP) synthase catalyzes the formation of the polyisoprenoid glycosyl carrier lipid dolichyl monophosphate. cis-IPPS form homodimers and are mechanistically and structurally distinct from trans-IPPS, which lack the DDXXD motifs, yet require Mg2+ for activity.	1.5916e-60
NZ_CP046327.1\|WP_004454135.1\|4158568_4161019_+\|single-stranded-DNA-specific-exonuclease-RecJ	gnl\|CDD\|273193	TIGR00644, recJ, single-stranded-DNA-specific exonuclease RecJ. All proteins in this family are 5'-3' single-strand DNA exonucleases. These proteins are used in some aspects of mismatch repair, recombination, and recombinational repair. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP046327.1\|WP_009891003.1\|4163849_4164299_+\|D-tyrosyl-tRNA(Tyr)-deacylase	gnl\|CDD\|235383	PRK05273, PRK05273, D-tyrosyl-tRNA(Tyr) deacylase; Provisional.	9.42808e-98
NZ_CP046327.1\|WP_009891020.1\|4139833_4140304_-\|DUF4358-domain-containing-protein	gnl\|CDD\|379531	pfam14270, DUF4358, Domain of unknown function (DUF4358). This domain family is found in bacteria, and is approximately 110 amino acids in length.	1.1053e-05
NZ_CP046327.1\|WP_009891008.1\|4153629_4154208_+\|accessory-gene-regulator-B-family-protein	gnl\|CDD\|377395	pfam04647, AgrB, Accessory gene regulator B. The arg locus consists of two transcripts: RNAII and RNAIII. RNAII encodes four genes (agrA, B, C, and D) whose gene products assemble a quorum sensing system. AgrB and AgrD are essential for the production of the autoinducing peptide which functions as a signal for quorum sensing. AgrB is a transmembrane protein.	9.56397e-22
NZ_CP046327.1\|WP_004454132.1\|4156096_4156594_+\|gamma-carbonic-anhydrase-family-protein	gnl\|CDD\|100051	cd04645, LbH_gamma_CA_like, Gamma carbonic anhydrase-like: This family is composed of gamma carbonic anhydrase (CA), Ferripyochelin Binding Protein (FBP), E. coli paaY protein, and similar proteins. CAs are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism, involving the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide, followed by the regeneration of the active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. They are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionary distinct groups - alpha, beta and gamma carbonic anhydrases - which show no significant sequence identity or structural similarity. Gamma CAs are trimeric enzymes with left-handed parallel beta helix (LbH) structural domain.	6.21398e-81
NZ_CP046327.1\|WP_003422921.1\|4161617_4163825_+\|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase	gnl\|CDD\|223394	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription].	0
NZ_CP046327.1\|WP_009893722.1\|4142349_4143897_+\|EAL-domain-containing-protein	gnl\|CDD\|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	2.0607e-89
NZ_CP046327.1\|WP_003426456.1\|4154688_4156068_+\|thioether-cross-link-forming-SCIFF-peptide-maturase	gnl\|CDD\|274892	TIGR03974, six-Cys-in-45_modification_radical_SAM_protein, SCIFF radical SAM maturase. Members of this protein family are predicted radical SAM enzymes universally associated with Six Cysteines in Forty-Five protein, or SCIFF (family TIGR03973), a predicted ribosomal natural product precursor that is nearly universal in the class Clostridia. Similarity of this family to radical SAM maturases (PqqE and subtilosin A maturase) found in the vicinity of other peptide precursors suggests this protein is the SCIFF radical SAM maturase. [Cellular processes, Biosynthesis of natural products].	0

>NZ_CP046327.1|WP_009891012.1|4150822_4151488_-|hypothetical-protein
MKGNIVQYNFADIEEEVYSLDYAIAWNTDEENVNIIPFTNKFCKESIESFCLGKINNFVEILNEGFVENHHYVHLDKMISVPKKKVNLVYQQDTHGYLLRDDNDNLIPAKITSEQSKSISSKMELFCAGEEKCLINILLKADPSYILDVDSIKDKNILNLGYESIDRYKEYNFDDDKILIFFINKKRYSVIMKKTNNSDNDLVSRNNAIKELFTNKAGNLN
>NZ_CP046327.1|WP_009891014.1|4148318_4150031_+|phosphoenolpyruvate--protein-phosphotransferase
MAYKGIGASPGVALGKALVVEHSELVIEKKSIDNVEAEIAKLEDAVAVSKEELVKVKEKASEELGAEEAEIFEAHLLVLEDPELIGSAIDKIKTESVNAEYALNEIKEMFVSMFESMDNEYMKERAADIKDVTNRILRHILGIKVVDLSALSEEVVLIAHDLTPSDTATMNKKMVLGFLTDIGGRTSHTAIMSRTLEIAAIVGLNDITSKVKDGDFVVFNGDTGEVIVNPDEETINKYTELKAKYEDERKALQLLKGKPSVTLDGKHVELAGNIGTPNDIEGLIKNDAEGVGLYRTEFLYMDRDSFPTEEIQYEAYKAVLEGMDGKPIVIRTLDIGGDKELSYLSMEPEMNPFLGYRAIRLCLDRKDIFKTQLRALYRASIHGRLRIMFPMISSLEELLQAKEVVKEVLAELDSEGVAYAKDVEIGMMIEVPSAAVISDVLAKHVDFFSIGTNDLIQYTCAVDRMNQKISYLYNQFNPAVLRLIKTVIDNAHKEGKWAGMCGESAGDQKMIPILLGMGLDEFSMSPISILPARKLITSVKESDMKKLADDVLNMGTAEEIKSYIEKTFNI
>NZ_CP046327.1|WP_003422895.1|4147705_4147966_+|HPr-family-phosphocarrier-protein
MEKVVSIKNASGLHARPAGMFVKKAAEFKSTVEVVAKDKTVNAKSIMGIMSLGLAQGEELKLVVNGEDEEVALAAMVELVESGFGE
>NZ_CP046327.1|WP_003431793.1|4146302_4147514_+|patatin-like-phospholipase-family-protein
MKGLVLEGGGTKGAYQIGAYKALRELGIEFQGVTGTSIGALNGAYIIQNDIEVMEDIWLNYDYTHFMNIDRETYERFKNVDFTTKNLNAVFELINKARKNEGIDISPLRQLMETTLNEDIIRKSKKDFGLVTVWWDKKINPYPLYIEDIPKGRLIDYLIASSSLPIFQTNMMDDKLYLDGMFCDNMPIGLLEDKGYEDVVVIRLIDDFIGKMNLNRHQNINIKTIIPSEYLGGSLNKDRDNVEKNIRLGYLDTMKAYERCTGIKYYFDVEYKYNEEYCFDKFRSMSNETIQYICNLLNIKRDASLRTVMESVIPKLGEVLGLPKDFSYKDLFYCIYEKKLEENNINRIKLYDFNKVIDVVNTNIDSNRNLASNFEVRPKISIKKNKNTKLLTNCIIKDIKNQS
>NZ_CP046327.1|WP_009893721.1|4144337_4146071_+|N-6-DNA-methylase
MDDISQDNFLLSKEYENSLDVDTKKASGIYYTPKIIVDYIVKKTLKNHDIIKNPYPRILDISCGCGNFLLEVYDILYDLFEENIYELKKKYDENYWTVDNIHRHILNYCIYGADIDEKAISILKDSLTNKKVVNDLDESDIKINLFCCDSLKKKWRYKFDYIVGNPPYIGHKKLEKKYKKFLLEKYSEVYKDKADLYFCFYKKIIDILKQGGVGSVITPRYFLESLSGKDLREYIKSNVNVQEIVDFLGANIFKNIGVSSCILTFDKKKTKETYIDVFKIKNEDICINKFETLEELLKSSKFEHFNINQRLLSDEWILVNKDDETFYNKIQEKCKYSLEDIAISFQGIITGCDKAFILSKDDVKLNLVDDKFLKCWIKSKNINKYIVDKSEYRLIYSNDIDNENTNKKILDEIIGLYKTKLENRRECKSGIRKWYELQWGREKLFFERKKIMYPYKSNENRFAIDYDNNFSSADVYSFFIKEEYLDKFSYEYLVGILNSSVYDKYFKITAKKMSKNIYDYYPNKVMKIRIFRDNNYEEIENLSKQIISILLNKSIDKGKVEKLQIKMDNLIMDSLGI
>NZ_CP046327.1|WP_003426473.1|4143899_4144298_+|Rrf2-family-transcriptional-regulator
MISEDVDYSIRIIRAIFNNGEDKPIDAKMILKSEDIPILTLYRLLRKLCANNILTFNKEDGKTYMLNVSLDTISLRTIVEVIDGKIYINKCTRYVSNCSNCLKGCKVNRELLEIEKEIYKLLSRKSIRQILE
>NZ_CP046327.1|WP_009893722.1|4142349_4143897_+|EAL-domain-containing-protein
MNKNSMTKIYSLNKIIFIIIGILGIVLLTRHIEVDIKVLILILLTLFSINVFISYLKIKLYEDKINLGLINNSDKFINITKDENFLKHVQNYIISNEKENCVMACFDLCRLKLINDIYGYELGDEVLNNILSNLKNYFGKEAIYGKLKSDVFVLIIKLENREQKIPYLVNLIKNKIMILSQIDSFKMDINIEASIGIYKFNNNEIDIKKAIDNADMARLKSKGLKHIEYVEFDNAMEEEIQSIMKIERDLFLAIKNKEFVIHYQPKVDSSTGNIIGSEALIRWLHPSLGMVGPNKFIPIAEKNGLINNIGRWLIQEVFITINKWISEGINVLPVSINLSRVELYKNDLVDFFKLMFNTYNIPKELIELEITETTALRDVKFISERLYEIKSLGMNISLDDFGVGNSNFINLKGIPLDIIKIDRSLILDIVTNTKTKFMVKAIINLSHDLNVTVICEGVEDMHQVKVLSELGCNFIQGYVFFKPLDEMNYKKLLTDGSYINLKDTLLDKCMTVEEE
>NZ_CP046327.1|WP_009893723.1|4141129_4142035_+|N-acetylmuramoyl-L-alanine-amidase
MKKKLLDGKITLIICKSVKIYTKKGEEMSKGNNNNNSRNKSKKTSHLNRKKRKLNKKKLAVLICFTVLFLFIAFKATQGVVALVKSMDKSNKTSQQQKVNSEQFDLGNEEENKKKKYTVFIDPGHGGNDKGTESKTSNRYEKDLNLQIAKKLANKLSKQKDIQVVVSRTDDTYISLKDRAILANNSSADVLVSIHLNAEKNGNTATGIETWYRNKATDGSKELAQTVQSTIVSYVKVRDRGIVENNFEVLRESNMPAILIECGFLTTPSEEQKIINEKYQDQLAEGIVQGVLSYLDSKGNK
>NZ_CP046327.1|WP_003422884.1|4140442_4141087_+|di-trans,poly-cis-decaprenylcistransferase
MRIPKHVGIIPDGNRRWASQNGMTKDKGYESGIDPGLESYRLCRDLGCEEVTFYGFTTDNTRRPSVQTKAFTKACIDAANILIDEGAALLVVGNTKSPMFPEELLPYTNRIKAKEGQIKANLLVNYGWYWDLNNISGVENVNKNNIQDYIQSFDVSRLDLIIRWGGRRRLSGFLPVQSIYADFYVIDNYWPDFKSDDIKDAFSWYDTQDVTLGG
>NZ_CP046327.1|WP_009891020.1|4139833_4140304_-|DUF4358-domain-containing-protein
MKKILILFFSIILSLGMVSCSSSGDYKNVSTSKIKKALKSSDLLIKESKIFDAKDFNYFNDVEEDIIQGFVINSSEKLSLEDIIVIKTDEVDKIYKTLENYKKDMIQAPFGEGHGEKINSEIANNTIIEKAGRYVYLISAENATQIENKILNIIKK
>NZ_CP046327.1|WP_009891008.1|4153629_4154208_+|accessory-gene-regulator-B-family-protein
MFKRYAEKMTSVLICNNMIDNNESKVYSYGFEILIAFIVNITTMLFIGFLFGKFTYVLFFLMCYCPIRQFSGGYHADNYFRCLLTFIFIILSTILIIENINIDLFKNIIMIIASVSWVGICVLCPIEHRSNPISDREKFVYKKTAIFISTVVLLITILSLSLSIFVDYFTYSAFAMFWIFVMLVLGKLKAKV
>NZ_CP046327.1|WP_003426457.1|4154237_4154384_+|cyclic-lactone-autoinducer-peptide
MKKFIVRFMKFASSLALSTAILSANSTCPWIIHQPKVPKEISNLKKTN
>NZ_CP046327.1|WP_003426456.1|4154688_4156068_+|thioether-cross-link-forming-SCIFF-peptide-maturase
MSMIHKFSMNGYNIVLDVNGGAVHVLDDVAYDLLDFYKEKSKEEILEILKSKYQEEKINEAYEEILNLEKEGLLYTEDTYQYHPSFVHREPVVKALCLNVAHDCNLKCKYCFAAQGDFGGEKELMSFEVGKAAIDYLIANSGSRKNLEIDFFGGEPLMNFEVVKQLVDYGRSVEKDYNKNIRFTITTNGVLLNDEIIDYINENMHNVVLSLDGRKEVNDNMRPTLNDKGSYDITLPRFKKLVEKRAKDKYYYIRGTFTRDNLDFSKDVMHFADLGFKLTSVEPVVGDESNPYALREEDLPKIFEEYEKFAVEYADRQLQGDGFKFFHFMIDLNQGPCVIKRITGCGAGNEYLSVTPNGDIYPCHQFVGNEEFKMANIFDEEIVLPENLKNMFREAHVYTKEECKQCWNKFYCSGGCHANAINFNNDISKPYELGCEMQRKRTECSIMIQAKLMLEGATN
>NZ_CP046327.1|WP_004454132.1|4156096_4156594_+|gamma-carbonic-anhydrase-family-protein
MIRDYLEDKPLIDESVFVAKSADVIGNVKIGKDSSIWYNAVVRGDEGPITIGENTNIQDCSIVHGDTETIIGNNVTVGHRSIVHGCKISDNVLIGMGSIILDNAEIGEYTLIGAGTLITSNKKFPPGVLIMGSPGKVVRELTEEDKKYIDESYEWYLEAAQNQKY
>NZ_CP046327.1|WP_009891005.1|4156891_4158556_+|AarF/ABC1/UbiB-kinase-family-protein
MRISYRNLKRYREIGYVLIKYGFSFIVERLNIEGIAYKIPLFDPPEEIKNMTTGERMKRVLEELGPTYIKIGQILSTRKDLLDQDIIDEISKLRDDVEKFDSNIAIDIFKEEVGLSIEEIFLEFKEEPIAAASIGQVYEGVLKTGEEVIVKIQRPNIEKIIKSDLEILRTIANTLKDLKKDFNLDLVQMIEEFQTQLMRELDYTFEAINATKFSRIFKNSDEVYIPKVYSEYNTKKILVMEKVNGTKLSDVEKIRRLGYNTKTIVEIGVRSFFTQVLSHGFFHADPHPGNIFVVAKNKIAYIDFGMIGIIDNKTLNQLNEIALAGVEKNVDKIIYLLIEMDALNGEADIKGLRQDLLYLIHYYYDISIEKINVTDILNELFRFFRQYKIVMPAQFVTLAKTVITLEGTSRTLNTDFSFGSMGKEFMKHHYKSKFNPKNVVLSSRQNVEEILLDIKTIPKQLKAILKNIERNNIKMQIEDVKMTRLENCIIELTSQISLSLVLASIIVGSSLIIASPNIENNIWIKFTAIAGFFISFIIGLCLVIRSIRSKYKKD
>NZ_CP046327.1|WP_004454135.1|4158568_4161019_+|single-stranded-DNA-specific-exonuclease-RecJ
MKKWILKYKGKIEESEFSKKLNISPEICQILKNRGICTEKDSEIFMNPSLDYLRDPFLMKDMQKAVDRIKLAVEKNEKIWIYGDYDVDGVSSTSILCLYFKSIGYNVDYYIPNRLEEGYGINEDAIKLISSRGCDLIISVDCGITSVSEVNTANDLGIDVIITDHHECQSEIPSAFAVINPKQEDCNYPFDSLCGCGVAFKMIQALTPKEEFKTSMYNYLEIVTLATICDIVPLIDENRIIVKNGLKSMKEGKNIGLRELIKVCGVESDKIGSSHIGFAIGPRINASGRLGYSYLGVELFTTQSQEEAVEIASILEEKNNERQMIEAKMYHEAEEMLKSNSRYNDDKVLVLAKEGWQHGIIGIVASKLTEKYYKPTILLGIENGEATGSARSIKGFNIFEALIKCKDLMTKFGGHEQAAGLSLDSDNVEILANEINKFADYNLTEDDMIENVNVEFELQENVINLNLVEELHKLEPFGLNNPNPRFIVRNYILKDLKVIGKNQQHLKLSIEKEKSYECIGFNMSHLKSMYKVGDKVDVLFQLDENNYMGNRKVQFLLKDIRLARPKSASNDKLSLKLMSKIIPKDTQSLYNISVSDFELFDGNTDINIFDYFEKDTLIISNSINGFYRAMSDISLIDLDFNINYNIIEDVSKNTDKLELIFSPNIDKIDLKRYNNIILYDYLYNKGEYSYIYENKREESEIIKYYNKTDLLYLKNVVSNIVPSRDEFITIYKQALIKKEIDLDMVNIRETFNVIPLKFFTILNVFRELNLLDFNLNYEKNSVLIRILPKPQKKLDLNESLILNNLKNLEKQYNSSY
>NZ_CP046327.1|WP_003426450.1|4161031_4161544_+|adenine-phosphoribosyltransferase
MDLKNFIRNIDDFPKPGIDFKDVTTLFKDGDAFKYAVDSIVEELKDKDVDLVIGPEARGFLMGTPVAYALGVGFVPIRKPGKLPGEVESYEYGLEYGTDTLEIHKDAIKKGQKVAIVDDLLATGGTMEAAAKLVEKLGGEVVSMQFLIELKFLNGREKLSNYDVNSLIKY
>NZ_CP046327.1|WP_003422921.1|4161617_4163825_+|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase
MHDKELQEIIEKIKVYAPNANFEMVEKAYNLAKKAHEGQYRKSGEPYFIHPLAVANILIEMELDIETITAGLLHDVVEDTEYTYEDIKKEFGKEVADLVDGVTKLGQIKYRSKEETQSENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYMPPEKAKYKAKETLEIYGGIAHRLGISKIKWELEDRALRFMDPEGYYDLVSRVSMKRSQREDYIQGIVELLKDKFKDLSIPCDVYGRPKHFYSIYRKMQKKHKTFEEIFDLTAVRILVDNVKDCYAVLGIVHTLWRPIPGRFKDYIAMPKPNMYQSLHTTVVGPDGEPLEIQIRTHEMHNIAENGIAAHWKYKEGISSKESKVEEKLQWLRQMMEWEKDLKDPQEFMDALKEDVFNSQVYVFTPKGDVIELPAESTPIDFAYRVHTNVGNKCVGAKIDGRIVPIDYKLQNGNIVEVLTSSNSNGPSRDWLNIVKTPNAKSRIRQFFKKERREENVDRGNTILEREFKKHDIPQKDPLVEKYMALVAKKFNQPSVEDLIATVGYGGIMSSQVVSKVKDLYLKEVKKAKKEQQIQEEDLNKHNISETEYSKKRKKNASQGIIVKGLDNILVRFAKCCNPLPGDEIVGYITKGRGVAIHRADCPNANNNGDFFQNRLVEVSWSSAGKGKFEAEIQIKAIDRRGIVNEITHIVAMDKLSLNGINARKGKDSIVSINLLVEVNDTEELKILMKKLKAIPGVESIYRMTN
>NZ_CP046327.1|WP_009891003.1|4163849_4164299_+|D-tyrosyl-tRNA(Tyr)-deacylase
MRAVVQRVSSSKVTVDENTIGQINKGLLVLLGVTHDDKSSDVDYMIDKILNLRIFEDENDKMNLSLMDIGGELLVVSQFTLYGDCRKGRRPGFSNASRPELANNLYEEFVKKAKDKGVTVGTGQFAAHMMVELTNDGPVTILLDSSKSF
>NZ_CP046327.1|WP_009891001.1|4164313_4164928_+|MBL-fold-metallo-hydrolase
MIIKKFVDSYFGVNTYVLGDEKTKKCAVIDPGGSLVETLSFVKENELNIEYIILTHGHGDHIGYVKDIKEKTGAKVVAHVDEKELLNDKNKNLSYTMRCGAQEFDADIYVSDKDKLELGELKMTFLHTPGHTQGCMCIRVEDEMFTGDTLFAGSIGRTDLYSGDFNQMEKSLKKLCKYEDAVRVYPGHGPTSTLGVEKKTNPYM

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Crispr_ID: NZ_CP046327_15

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046327_15

4152387-4152675

Orphan

Consensus_repeat	Method
ATATGTTTAGAAGCTGTAAAAAAA	CRISPRCasFinder

4 spacers

The CRISPR arrays of NZ_CP046327_15

>merge|NZ_CP046327|15|4152387-4152675|CRISPRCasFinder
ATATGTTTAGAAGCTGTAAAAAAAGATGGAAAATCTTTAGCTTATGTAAAGGAACAAAGTAATAGTATATGTTTAGAAGCTGTAAAAGAAAACTACAGTGCACTATCTTGTGTAAAAGAGCAAACAGAAGAAATATGTATAGAAGCAGTAAAACAGAATGACTTTGCATTGTATTATGTAAATGAACAGACAGAAAAAATATGTATGGAAGCAGTAAAAAGAAGTTATATGGCTCTACAGTATGTAAATAAGCAAACAGAAGAGATTTGTTTGGAAGCAGTAAGAATTG

>NZ_CP046327|15|14|4152387-4152675|CRISPRCasFinder
ATATGTTTAGAAGCTGTAAAAAAA	GATGGAAAATCTTTAGCTTATGTAAAGGAACAAAGTAATAGT
ATATGTTTAGAAGCTGTAAAAGAA	AACTACAGTGCACTATCTTGTGTAAAAGAGCAAACAGAAGAA
ATATGTATAGAAGCAGTAAAACAG	AATGACTTTGCATTGTATTATGTAAATGAACAGACAGAAAAA
ATATGTATGGAAGCAGTAAAAAGA	AGTTATATGGCTCTACAGTATGTAAATAAGCAAACAGAAGAG
ATTTGTTTGGAAGCAGTAAGAATTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046327.1\|WP_009893721.1\|4144337_4146071_+\|N-6-DNA-methylase	unknown	unknown	gnl\|CDD\|380294
NZ_CP046327.1\|WP_003422895.1\|4147705_4147966_+\|HPr-family-phosphocarrier-protein	unknown	unknown	gnl\|CDD\|376329
NZ_CP046327.1\|WP_009891014.1\|4148318_4150031_+\|phosphoenolpyruvate--protein-phosphotransferase	unknown	unknown	gnl\|CDD\|224006
NZ_CP046327.1\|WP_003426473.1\|4143899_4144298_+\|Rrf2-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224870
NZ_CP046327.1\|WP_003426450.1\|4161031_4161544_+\|adenine-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|235028
NZ_CP046327.1\|WP_003431793.1\|4146302_4147514_+\|patatin-like-phospholipase-family-protein	unknown	unknown	gnl\|CDD\|132848
NZ_CP046327.1\|WP_009893723.1\|4141129_4142035_+\|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl\|CDD\|119407
NZ_CP046327.1\|WP_009891001.1\|4164313_4164928_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293792
NZ_CP046327.1\|WP_003426457.1\|4154237_4154384_+\|cyclic-lactone-autoinducer-peptide	unknown	unknown	gnl\|CDD\|275064
NZ_CP046327.1\|WP_009891005.1\|4156891_4158556_+\|AarF/ABC1/UbiB-kinase-family-protein	unknown	unknown	gnl\|CDD\|223733
NZ_CP046327.1\|WP_003422884.1\|4140442_4141087_+\|di-trans,poly-cis-decaprenylcistransferase	unknown	unknown	gnl\|CDD\|259850
NZ_CP046327.1\|WP_004454135.1\|4158568_4161019_+\|single-stranded-DNA-specific-exonuclease-RecJ	unknown	unknown	gnl\|CDD\|273193
NZ_CP046327.1\|WP_009891003.1\|4163849_4164299_+\|D-tyrosyl-tRNA(Tyr)-deacylase	unknown	unknown	gnl\|CDD\|235383
NZ_CP046327.1\|WP_009891008.1\|4153629_4154208_+\|accessory-gene-regulator-B-family-protein	unknown	unknown	gnl\|CDD\|377395
NZ_CP046327.1\|WP_009891020.1\|4139833_4140304_-\|DUF4358-domain-containing-protein	unknown	unknown	gnl\|CDD\|379531
NZ_CP046327.1\|WP_009891012.1\|4150822_4151488_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046327.1\|WP_004454132.1\|4156096_4156594_+\|gamma-carbonic-anhydrase-family-protein	unknown	unknown	gnl\|CDD\|100051
NZ_CP046327.1\|WP_003422921.1\|4161617_4163825_+\|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|223394
NZ_CP046327.1\|WP_009893722.1\|4142349_4143897_+\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|238923
NZ_CP046327.1\|WP_003426456.1\|4154688_4156068_+\|thioether-cross-link-forming-SCIFF-peptide-maturase	unknown	unknown	gnl\|CDD\|274892

Protein	Function_ID	Function_description	E-value
NZ_CP046327.1\|WP_009893721.1\|4144337_4146071_+\|N-6-DNA-methylase	gnl\|CDD\|380294	NF033452, BREX_1_MTaseX, BREX-1 system adenine-specific DNA-methyltransferase PglX. This protein, PglX, is a site-specific DNA methyltransferase associated BREX (bacteriophage exclusion) type 1 systems. The phage resistance appears not to be through restriction-modification, as phage DNA appears not to get degraded, but it does manage to inhibit phage replication.	1.24468e-17
NZ_CP046327.1\|WP_003422895.1\|4147705_4147966_+\|HPr-family-phosphocarrier-protein	gnl\|CDD\|376329	pfam00381, PTS-HPr, PTS HPr component phosphorylation site.	1.66602e-32
NZ_CP046327.1\|WP_009891014.1\|4148318_4150031_+\|phosphoenolpyruvate--protein-phosphotransferase	gnl\|CDD\|224006	COG1080, PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism].	0
NZ_CP046327.1\|WP_003426473.1\|4143899_4144298_+\|Rrf2-family-transcriptional-regulator	gnl\|CDD\|224870	COG1959, COG1959, Predicted transcriptional regulator [Transcription].	4.93588e-10
NZ_CP046327.1\|WP_003426450.1\|4161031_4161544_+\|adenine-phosphoribosyltransferase	gnl\|CDD\|235028	PRK02304, PRK02304, adenine phosphoribosyltransferase; Provisional.	1.26188e-100
NZ_CP046327.1\|WP_003431793.1\|4146302_4147514_+\|patatin-like-phospholipase-family-protein	gnl\|CDD\|132848	cd07209, Pat_hypo_Ecoli_Z1214_like, Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.	2.241e-60
NZ_CP046327.1\|WP_009893723.1\|4141129_4142035_+\|N-acetylmuramoyl-L-alanine-amidase	gnl\|CDD\|119407	cd02696, MurNAc-LAA, N-acetylmuramoyl-L-alanine amidase or MurNAc-LAA (also known as peptidoglycan aminohydrolase, NAMLA amidase, NAMLAA, Amidase 3, and peptidoglycan amidase; EC 3.5.1.28) is an autolysin that hydrolyzes the amide bond between N-acetylmuramoyl and L-amino acids in certain cell wall glycopeptides. These proteins are Zn-dependent peptidases with highly conserved residues involved in cation co-ordination. MurNAc-LAA in this family is one of several peptidoglycan hydrolases (PGHs) found in bacterial and bacteriophage or prophage genomes that are involved in the degradation of the peptidoglycan. In Escherichia coli, there are five MurNAc-LAAs present: AmiA, AmiB, AmiC and AmiD that are periplasmic, and AmpD that is cytoplasmic. Three of these (AmiA, AmiB and AmiC) belong to this family, the other two (AmiD and AmpD) do not. E. coli AmiA, AmiB and AmiC play an important role in cleaving the septum to release daughter cells after cell division. In general, bacterial MurNAc-LAAs are members of the bacterial autolytic system and carry a signal peptide in their N-termini that allows their transport across the cytoplasmic membrane. However, the bacteriophage MurNAc-LAAs are endolysins since these phage-encoded enzymes break down bacterial peptidoglycan at the terminal stage of the phage reproduction cycle. As opposed to autolysins, almost all endolysins have no signal peptides and their translocation through the cytoplasmic membrane is thought to proceed with the help of phage-encoded holin proteins. The amidase catalytic module is fused to another functional module (cell wall binding module or CWBM) either at the N- or C-terminus, which is responsible for high affinity binding of the protein to the cell wall.	1.29695e-72
NZ_CP046327.1\|WP_009891001.1\|4164313_4164928_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293792	cd06262, metallo-hydrolase-like_MBL-fold, mainly hydrolytic enzymes and related proteins which carry out various biological functions; MBL-fold metallohydrolase domain. Members of the MBL-fold metallohydrolase superfamily are mainly hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) for which this fold was named perform only a small fraction of the activities included in this superfamily. Activities carried out by superfamily members include class B beta-lactamases which can catalyze the hydrolysis of a wide range of beta-lactam antibiotics, hydroxyacylglutathione hydrolases (also called glyoxalase II) which hydrolyze S-d-lactoylglutathione to d-lactate in the second step of the glycoxlase system, AHL lactonases which catalyze the hydrolysis and opening of the homoserine lactone rings of acyl homoserine lactones (AHLs), persulfide dioxygenase which catalyze the oxidation of glutathione persulfide to glutathione and persulfite in the mitochondria, flavodiiron proteins which catalyze the reduction of oxygen and/or nitric oxide to water or nitrous oxide respectively, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J which has both 5'-3' exoribonucleolytic and endonucleolytic activity and ribonuclease Z which catalyzes the endonucleolytic removal of the 3' extension of the majority of tRNA precursors, cyclic nucleotide phosphodiesterases which decompose cyclic adenosine and guanosine 3', 5'-monophosphate (cAMP and cGMP) respectively, insecticide hydrolases, and proteins required for natural transformation competence. The diversity of biological roles is reflected in variations in the active site metallo-chemistry, for example classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, human persulfide dioxygenase ETHE1 is a mono-iron binding member of the superfamily; Arabidopsis thaliana hydroxyacylglutathione hydrolases incorporates iron, manganese, and zinc in its dinuclear metal binding site, and flavodiiron proteins contains a diiron site.	8.82071e-73
NZ_CP046327.1\|WP_003426457.1\|4154237_4154384_+\|cyclic-lactone-autoinducer-peptide	gnl\|CDD\|275064	TIGR04223, quorum_AgrD, cyclic lactone autoinducer peptide. Members of this family of short peptides are precursors to thiolactone (unless Cys is replaced by Ser) cyclic autoinducer peptides, used in quorum-sensing systems in Gram-positive bacteria. The best characterized is the AgrD precursor, processed by the AgrB protein. Nearby proteins regularly encountered include a histidine kinase and a response regulator. This model is related to pfam05931 but is newer and currently broader in scope.	4.07974e-08
NZ_CP046327.1\|WP_009891005.1\|4156891_4158556_+\|AarF/ABC1/UbiB-kinase-family-protein	gnl\|CDD\|223733	COG0661, AarF, Predicted unusual protein kinase [General function prediction only].	1.07824e-141
NZ_CP046327.1\|WP_003422884.1\|4140442_4141087_+\|di-trans,poly-cis-decaprenylcistransferase	gnl\|CDD\|259850	cd00475, Cis_IPPS, Cis (Z)-Isoprenyl Diphosphate Synthases. Cis (Z)-Isoprenyl Diphosphate Synthases (cis-IPPS) catalyze the successive 1'-4 condensation of the isopentenyl diphosphate (IPP) molecule to trans,trans-farnesyl diphosphate (FPP) or to cis,trans-FPP to form long-chain polyprenyl diphosphates. A few can also catalyze the condensation of IPP to trans-geranyl diphosphate to form the short-chain cis,trans- FPP. In prokaryotes, the cis-IPPS, undecaprenyl diphosphate synthase (UPP synthase), catalyzes the formation of the carrier lipid UPP in bacterial cell wall peptidoglycan biosynthesis. Similarly, in eukaryotes, the cis-IPPS, dehydrodolichyl diphosphate (dedol-PP) synthase catalyzes the formation of the polyisoprenoid glycosyl carrier lipid dolichyl monophosphate. cis-IPPS form homodimers and are mechanistically and structurally distinct from trans-IPPS, which lack the DDXXD motifs, yet require Mg2+ for activity.	1.5916e-60
NZ_CP046327.1\|WP_004454135.1\|4158568_4161019_+\|single-stranded-DNA-specific-exonuclease-RecJ	gnl\|CDD\|273193	TIGR00644, recJ, single-stranded-DNA-specific exonuclease RecJ. All proteins in this family are 5'-3' single-strand DNA exonucleases. These proteins are used in some aspects of mismatch repair, recombination, and recombinational repair. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP046327.1\|WP_009891003.1\|4163849_4164299_+\|D-tyrosyl-tRNA(Tyr)-deacylase	gnl\|CDD\|235383	PRK05273, PRK05273, D-tyrosyl-tRNA(Tyr) deacylase; Provisional.	9.42808e-98
NZ_CP046327.1\|WP_009891020.1\|4139833_4140304_-\|DUF4358-domain-containing-protein	gnl\|CDD\|379531	pfam14270, DUF4358, Domain of unknown function (DUF4358). This domain family is found in bacteria, and is approximately 110 amino acids in length.	1.1053e-05
NZ_CP046327.1\|WP_009891008.1\|4153629_4154208_+\|accessory-gene-regulator-B-family-protein	gnl\|CDD\|377395	pfam04647, AgrB, Accessory gene regulator B. The arg locus consists of two transcripts: RNAII and RNAIII. RNAII encodes four genes (agrA, B, C, and D) whose gene products assemble a quorum sensing system. AgrB and AgrD are essential for the production of the autoinducing peptide which functions as a signal for quorum sensing. AgrB is a transmembrane protein.	9.56397e-22
NZ_CP046327.1\|WP_004454132.1\|4156096_4156594_+\|gamma-carbonic-anhydrase-family-protein	gnl\|CDD\|100051	cd04645, LbH_gamma_CA_like, Gamma carbonic anhydrase-like: This family is composed of gamma carbonic anhydrase (CA), Ferripyochelin Binding Protein (FBP), E. coli paaY protein, and similar proteins. CAs are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism, involving the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide, followed by the regeneration of the active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. They are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionary distinct groups - alpha, beta and gamma carbonic anhydrases - which show no significant sequence identity or structural similarity. Gamma CAs are trimeric enzymes with left-handed parallel beta helix (LbH) structural domain.	6.21398e-81
NZ_CP046327.1\|WP_003422921.1\|4161617_4163825_+\|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase	gnl\|CDD\|223394	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription].	0
NZ_CP046327.1\|WP_009893722.1\|4142349_4143897_+\|EAL-domain-containing-protein	gnl\|CDD\|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	2.0607e-89
NZ_CP046327.1\|WP_003426456.1\|4154688_4156068_+\|thioether-cross-link-forming-SCIFF-peptide-maturase	gnl\|CDD\|274892	TIGR03974, six-Cys-in-45_modification_radical_SAM_protein, SCIFF radical SAM maturase. Members of this protein family are predicted radical SAM enzymes universally associated with Six Cysteines in Forty-Five protein, or SCIFF (family TIGR03973), a predicted ribosomal natural product precursor that is nearly universal in the class Clostridia. Similarity of this family to radical SAM maturases (PqqE and subtilosin A maturase) found in the vicinity of other peptide precursors suggests this protein is the SCIFF radical SAM maturase. [Cellular processes, Biosynthesis of natural products].	0

>NZ_CP046327.1|WP_009891012.1|4150822_4151488_-|hypothetical-protein
MKGNIVQYNFADIEEEVYSLDYAIAWNTDEENVNIIPFTNKFCKESIESFCLGKINNFVEILNEGFVENHHYVHLDKMISVPKKKVNLVYQQDTHGYLLRDDNDNLIPAKITSEQSKSISSKMELFCAGEEKCLINILLKADPSYILDVDSIKDKNILNLGYESIDRYKEYNFDDDKILIFFINKKRYSVIMKKTNNSDNDLVSRNNAIKELFTNKAGNLN
>NZ_CP046327.1|WP_009891014.1|4148318_4150031_+|phosphoenolpyruvate--protein-phosphotransferase
MAYKGIGASPGVALGKALVVEHSELVIEKKSIDNVEAEIAKLEDAVAVSKEELVKVKEKASEELGAEEAEIFEAHLLVLEDPELIGSAIDKIKTESVNAEYALNEIKEMFVSMFESMDNEYMKERAADIKDVTNRILRHILGIKVVDLSALSEEVVLIAHDLTPSDTATMNKKMVLGFLTDIGGRTSHTAIMSRTLEIAAIVGLNDITSKVKDGDFVVFNGDTGEVIVNPDEETINKYTELKAKYEDERKALQLLKGKPSVTLDGKHVELAGNIGTPNDIEGLIKNDAEGVGLYRTEFLYMDRDSFPTEEIQYEAYKAVLEGMDGKPIVIRTLDIGGDKELSYLSMEPEMNPFLGYRAIRLCLDRKDIFKTQLRALYRASIHGRLRIMFPMISSLEELLQAKEVVKEVLAELDSEGVAYAKDVEIGMMIEVPSAAVISDVLAKHVDFFSIGTNDLIQYTCAVDRMNQKISYLYNQFNPAVLRLIKTVIDNAHKEGKWAGMCGESAGDQKMIPILLGMGLDEFSMSPISILPARKLITSVKESDMKKLADDVLNMGTAEEIKSYIEKTFNI
>NZ_CP046327.1|WP_003422895.1|4147705_4147966_+|HPr-family-phosphocarrier-protein
MEKVVSIKNASGLHARPAGMFVKKAAEFKSTVEVVAKDKTVNAKSIMGIMSLGLAQGEELKLVVNGEDEEVALAAMVELVESGFGE
>NZ_CP046327.1|WP_003431793.1|4146302_4147514_+|patatin-like-phospholipase-family-protein
MKGLVLEGGGTKGAYQIGAYKALRELGIEFQGVTGTSIGALNGAYIIQNDIEVMEDIWLNYDYTHFMNIDRETYERFKNVDFTTKNLNAVFELINKARKNEGIDISPLRQLMETTLNEDIIRKSKKDFGLVTVWWDKKINPYPLYIEDIPKGRLIDYLIASSSLPIFQTNMMDDKLYLDGMFCDNMPIGLLEDKGYEDVVVIRLIDDFIGKMNLNRHQNINIKTIIPSEYLGGSLNKDRDNVEKNIRLGYLDTMKAYERCTGIKYYFDVEYKYNEEYCFDKFRSMSNETIQYICNLLNIKRDASLRTVMESVIPKLGEVLGLPKDFSYKDLFYCIYEKKLEENNINRIKLYDFNKVIDVVNTNIDSNRNLASNFEVRPKISIKKNKNTKLLTNCIIKDIKNQS
>NZ_CP046327.1|WP_009893721.1|4144337_4146071_+|N-6-DNA-methylase
MDDISQDNFLLSKEYENSLDVDTKKASGIYYTPKIIVDYIVKKTLKNHDIIKNPYPRILDISCGCGNFLLEVYDILYDLFEENIYELKKKYDENYWTVDNIHRHILNYCIYGADIDEKAISILKDSLTNKKVVNDLDESDIKINLFCCDSLKKKWRYKFDYIVGNPPYIGHKKLEKKYKKFLLEKYSEVYKDKADLYFCFYKKIIDILKQGGVGSVITPRYFLESLSGKDLREYIKSNVNVQEIVDFLGANIFKNIGVSSCILTFDKKKTKETYIDVFKIKNEDICINKFETLEELLKSSKFEHFNINQRLLSDEWILVNKDDETFYNKIQEKCKYSLEDIAISFQGIITGCDKAFILSKDDVKLNLVDDKFLKCWIKSKNINKYIVDKSEYRLIYSNDIDNENTNKKILDEIIGLYKTKLENRRECKSGIRKWYELQWGREKLFFERKKIMYPYKSNENRFAIDYDNNFSSADVYSFFIKEEYLDKFSYEYLVGILNSSVYDKYFKITAKKMSKNIYDYYPNKVMKIRIFRDNNYEEIENLSKQIISILLNKSIDKGKVEKLQIKMDNLIMDSLGI
>NZ_CP046327.1|WP_003426473.1|4143899_4144298_+|Rrf2-family-transcriptional-regulator
MISEDVDYSIRIIRAIFNNGEDKPIDAKMILKSEDIPILTLYRLLRKLCANNILTFNKEDGKTYMLNVSLDTISLRTIVEVIDGKIYINKCTRYVSNCSNCLKGCKVNRELLEIEKEIYKLLSRKSIRQILE
>NZ_CP046327.1|WP_009893722.1|4142349_4143897_+|EAL-domain-containing-protein
MNKNSMTKIYSLNKIIFIIIGILGIVLLTRHIEVDIKVLILILLTLFSINVFISYLKIKLYEDKINLGLINNSDKFINITKDENFLKHVQNYIISNEKENCVMACFDLCRLKLINDIYGYELGDEVLNNILSNLKNYFGKEAIYGKLKSDVFVLIIKLENREQKIPYLVNLIKNKIMILSQIDSFKMDINIEASIGIYKFNNNEIDIKKAIDNADMARLKSKGLKHIEYVEFDNAMEEEIQSIMKIERDLFLAIKNKEFVIHYQPKVDSSTGNIIGSEALIRWLHPSLGMVGPNKFIPIAEKNGLINNIGRWLIQEVFITINKWISEGINVLPVSINLSRVELYKNDLVDFFKLMFNTYNIPKELIELEITETTALRDVKFISERLYEIKSLGMNISLDDFGVGNSNFINLKGIPLDIIKIDRSLILDIVTNTKTKFMVKAIINLSHDLNVTVICEGVEDMHQVKVLSELGCNFIQGYVFFKPLDEMNYKKLLTDGSYINLKDTLLDKCMTVEEE
>NZ_CP046327.1|WP_009893723.1|4141129_4142035_+|N-acetylmuramoyl-L-alanine-amidase
MKKKLLDGKITLIICKSVKIYTKKGEEMSKGNNNNNSRNKSKKTSHLNRKKRKLNKKKLAVLICFTVLFLFIAFKATQGVVALVKSMDKSNKTSQQQKVNSEQFDLGNEEENKKKKYTVFIDPGHGGNDKGTESKTSNRYEKDLNLQIAKKLANKLSKQKDIQVVVSRTDDTYISLKDRAILANNSSADVLVSIHLNAEKNGNTATGIETWYRNKATDGSKELAQTVQSTIVSYVKVRDRGIVENNFEVLRESNMPAILIECGFLTTPSEEQKIINEKYQDQLAEGIVQGVLSYLDSKGNK
>NZ_CP046327.1|WP_003422884.1|4140442_4141087_+|di-trans,poly-cis-decaprenylcistransferase
MRIPKHVGIIPDGNRRWASQNGMTKDKGYESGIDPGLESYRLCRDLGCEEVTFYGFTTDNTRRPSVQTKAFTKACIDAANILIDEGAALLVVGNTKSPMFPEELLPYTNRIKAKEGQIKANLLVNYGWYWDLNNISGVENVNKNNIQDYIQSFDVSRLDLIIRWGGRRRLSGFLPVQSIYADFYVIDNYWPDFKSDDIKDAFSWYDTQDVTLGG
>NZ_CP046327.1|WP_009891020.1|4139833_4140304_-|DUF4358-domain-containing-protein
MKKILILFFSIILSLGMVSCSSSGDYKNVSTSKIKKALKSSDLLIKESKIFDAKDFNYFNDVEEDIIQGFVINSSEKLSLEDIIVIKTDEVDKIYKTLENYKKDMIQAPFGEGHGEKINSEIANNTIIEKAGRYVYLISAENATQIENKILNIIKK
>NZ_CP046327.1|WP_009891008.1|4153629_4154208_+|accessory-gene-regulator-B-family-protein
MFKRYAEKMTSVLICNNMIDNNESKVYSYGFEILIAFIVNITTMLFIGFLFGKFTYVLFFLMCYCPIRQFSGGYHADNYFRCLLTFIFIILSTILIIENINIDLFKNIIMIIASVSWVGICVLCPIEHRSNPISDREKFVYKKTAIFISTVVLLITILSLSLSIFVDYFTYSAFAMFWIFVMLVLGKLKAKV
>NZ_CP046327.1|WP_003426457.1|4154237_4154384_+|cyclic-lactone-autoinducer-peptide
MKKFIVRFMKFASSLALSTAILSANSTCPWIIHQPKVPKEISNLKKTN
>NZ_CP046327.1|WP_003426456.1|4154688_4156068_+|thioether-cross-link-forming-SCIFF-peptide-maturase
MSMIHKFSMNGYNIVLDVNGGAVHVLDDVAYDLLDFYKEKSKEEILEILKSKYQEEKINEAYEEILNLEKEGLLYTEDTYQYHPSFVHREPVVKALCLNVAHDCNLKCKYCFAAQGDFGGEKELMSFEVGKAAIDYLIANSGSRKNLEIDFFGGEPLMNFEVVKQLVDYGRSVEKDYNKNIRFTITTNGVLLNDEIIDYINENMHNVVLSLDGRKEVNDNMRPTLNDKGSYDITLPRFKKLVEKRAKDKYYYIRGTFTRDNLDFSKDVMHFADLGFKLTSVEPVVGDESNPYALREEDLPKIFEEYEKFAVEYADRQLQGDGFKFFHFMIDLNQGPCVIKRITGCGAGNEYLSVTPNGDIYPCHQFVGNEEFKMANIFDEEIVLPENLKNMFREAHVYTKEECKQCWNKFYCSGGCHANAINFNNDISKPYELGCEMQRKRTECSIMIQAKLMLEGATN
>NZ_CP046327.1|WP_004454132.1|4156096_4156594_+|gamma-carbonic-anhydrase-family-protein
MIRDYLEDKPLIDESVFVAKSADVIGNVKIGKDSSIWYNAVVRGDEGPITIGENTNIQDCSIVHGDTETIIGNNVTVGHRSIVHGCKISDNVLIGMGSIILDNAEIGEYTLIGAGTLITSNKKFPPGVLIMGSPGKVVRELTEEDKKYIDESYEWYLEAAQNQKY
>NZ_CP046327.1|WP_009891005.1|4156891_4158556_+|AarF/ABC1/UbiB-kinase-family-protein
MRISYRNLKRYREIGYVLIKYGFSFIVERLNIEGIAYKIPLFDPPEEIKNMTTGERMKRVLEELGPTYIKIGQILSTRKDLLDQDIIDEISKLRDDVEKFDSNIAIDIFKEEVGLSIEEIFLEFKEEPIAAASIGQVYEGVLKTGEEVIVKIQRPNIEKIIKSDLEILRTIANTLKDLKKDFNLDLVQMIEEFQTQLMRELDYTFEAINATKFSRIFKNSDEVYIPKVYSEYNTKKILVMEKVNGTKLSDVEKIRRLGYNTKTIVEIGVRSFFTQVLSHGFFHADPHPGNIFVVAKNKIAYIDFGMIGIIDNKTLNQLNEIALAGVEKNVDKIIYLLIEMDALNGEADIKGLRQDLLYLIHYYYDISIEKINVTDILNELFRFFRQYKIVMPAQFVTLAKTVITLEGTSRTLNTDFSFGSMGKEFMKHHYKSKFNPKNVVLSSRQNVEEILLDIKTIPKQLKAILKNIERNNIKMQIEDVKMTRLENCIIELTSQISLSLVLASIIVGSSLIIASPNIENNIWIKFTAIAGFFISFIIGLCLVIRSIRSKYKKD
>NZ_CP046327.1|WP_004454135.1|4158568_4161019_+|single-stranded-DNA-specific-exonuclease-RecJ
MKKWILKYKGKIEESEFSKKLNISPEICQILKNRGICTEKDSEIFMNPSLDYLRDPFLMKDMQKAVDRIKLAVEKNEKIWIYGDYDVDGVSSTSILCLYFKSIGYNVDYYIPNRLEEGYGINEDAIKLISSRGCDLIISVDCGITSVSEVNTANDLGIDVIITDHHECQSEIPSAFAVINPKQEDCNYPFDSLCGCGVAFKMIQALTPKEEFKTSMYNYLEIVTLATICDIVPLIDENRIIVKNGLKSMKEGKNIGLRELIKVCGVESDKIGSSHIGFAIGPRINASGRLGYSYLGVELFTTQSQEEAVEIASILEEKNNERQMIEAKMYHEAEEMLKSNSRYNDDKVLVLAKEGWQHGIIGIVASKLTEKYYKPTILLGIENGEATGSARSIKGFNIFEALIKCKDLMTKFGGHEQAAGLSLDSDNVEILANEINKFADYNLTEDDMIENVNVEFELQENVINLNLVEELHKLEPFGLNNPNPRFIVRNYILKDLKVIGKNQQHLKLSIEKEKSYECIGFNMSHLKSMYKVGDKVDVLFQLDENNYMGNRKVQFLLKDIRLARPKSASNDKLSLKLMSKIIPKDTQSLYNISVSDFELFDGNTDINIFDYFEKDTLIISNSINGFYRAMSDISLIDLDFNINYNIIEDVSKNTDKLELIFSPNIDKIDLKRYNNIILYDYLYNKGEYSYIYENKREESEIIKYYNKTDLLYLKNVVSNIVPSRDEFITIYKQALIKKEIDLDMVNIRETFNVIPLKFFTILNVFRELNLLDFNLNYEKNSVLIRILPKPQKKLDLNESLILNNLKNLEKQYNSSY
>NZ_CP046327.1|WP_003426450.1|4161031_4161544_+|adenine-phosphoribosyltransferase
MDLKNFIRNIDDFPKPGIDFKDVTTLFKDGDAFKYAVDSIVEELKDKDVDLVIGPEARGFLMGTPVAYALGVGFVPIRKPGKLPGEVESYEYGLEYGTDTLEIHKDAIKKGQKVAIVDDLLATGGTMEAAAKLVEKLGGEVVSMQFLIELKFLNGREKLSNYDVNSLIKY
>NZ_CP046327.1|WP_003422921.1|4161617_4163825_+|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase
MHDKELQEIIEKIKVYAPNANFEMVEKAYNLAKKAHEGQYRKSGEPYFIHPLAVANILIEMELDIETITAGLLHDVVEDTEYTYEDIKKEFGKEVADLVDGVTKLGQIKYRSKEETQSENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYMPPEKAKYKAKETLEIYGGIAHRLGISKIKWELEDRALRFMDPEGYYDLVSRVSMKRSQREDYIQGIVELLKDKFKDLSIPCDVYGRPKHFYSIYRKMQKKHKTFEEIFDLTAVRILVDNVKDCYAVLGIVHTLWRPIPGRFKDYIAMPKPNMYQSLHTTVVGPDGEPLEIQIRTHEMHNIAENGIAAHWKYKEGISSKESKVEEKLQWLRQMMEWEKDLKDPQEFMDALKEDVFNSQVYVFTPKGDVIELPAESTPIDFAYRVHTNVGNKCVGAKIDGRIVPIDYKLQNGNIVEVLTSSNSNGPSRDWLNIVKTPNAKSRIRQFFKKERREENVDRGNTILEREFKKHDIPQKDPLVEKYMALVAKKFNQPSVEDLIATVGYGGIMSSQVVSKVKDLYLKEVKKAKKEQQIQEEDLNKHNISETEYSKKRKKNASQGIIVKGLDNILVRFAKCCNPLPGDEIVGYITKGRGVAIHRADCPNANNNGDFFQNRLVEVSWSSAGKGKFEAEIQIKAIDRRGIVNEITHIVAMDKLSLNGINARKGKDSIVSINLLVEVNDTEELKILMKKLKAIPGVESIYRMTN
>NZ_CP046327.1|WP_009891003.1|4163849_4164299_+|D-tyrosyl-tRNA(Tyr)-deacylase
MRAVVQRVSSSKVTVDENTIGQINKGLLVLLGVTHDDKSSDVDYMIDKILNLRIFEDENDKMNLSLMDIGGELLVVSQFTLYGDCRKGRRPGFSNASRPELANNLYEEFVKKAKDKGVTVGTGQFAAHMMVELTNDGPVTILLDSSKSF
>NZ_CP046327.1|WP_009891001.1|4164313_4164928_+|MBL-fold-metallo-hydrolase
MIIKKFVDSYFGVNTYVLGDEKTKKCAVIDPGGSLVETLSFVKENELNIEYIILTHGHGDHIGYVKDIKEKTGAKVVAHVDEKELLNDKNKNLSYTMRCGAQEFDADIYVSDKDKLELGELKMTFLHTPGHTQGCMCIRVEDEMFTGDTLFAGSIGRTDLYSGDFNQMEKSLKKLCKYEDAVRVYPGHGPTSTLGVEKKTNPYM

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP046327_11	11.4\|3570358\|20\|NZ_CP046327\|CRT	3570358-3570377	20	NZ_CP046327.1	3452174-3452193	0	1.0
NZ_CP046327_11	11.4\|3570358\|20\|NZ_CP046327\|CRT	3570358-3570377	20	NZ_CP046327.1	3452354-3452373	0	1.0
NZ_CP046327_11	11.21\|3571222\|20\|NZ_CP046327\|CRT	3571222-3571241	20	NZ_CP046327.1	3452225-3452244	1	0.95
NZ_CP046327_11	11.21\|3571222\|20\|NZ_CP046327\|CRT	3571222-3571241	20	NZ_CP046327.1	3452363-3452382	1	0.95
NZ_CP046327_11	11.5\|3570403\|20\|NZ_CP046327\|CRT	3570403-3570422	20	NZ_CP046327.1	1444642-1444661	2	0.9
NZ_CP046327_11	11.7\|3570493\|20\|NZ_CP046327\|CRT	3570493-3570512	20	NZ_CP046327.1	48562-48581	2	0.9
NZ_CP046327_11	11.7\|3570493\|20\|NZ_CP046327\|CRT	3570493-3570512	20	NZ_CP046327.1	1444642-1444661	2	0.9
NZ_CP046327_11	11.10\|3570628\|20\|NZ_CP046327\|CRT	3570628-3570647	20	NZ_CP046327.1	3452216-3452235	2	0.9
NZ_CP046327_11	11.19\|3571132\|20\|NZ_CP046327\|CRT	3571132-3571151	20	NZ_CP046327.1	3452372-3452391	2	0.9
NZ_CP046327_11	11.19\|3571132\|20\|NZ_CP046327\|CRT	3571132-3571151	20	NZ_CP046327.1	3453182-3453201	2	0.9
NZ_CP046327_11	11.21\|3571222\|20\|NZ_CP046327\|CRT	3571222-3571241	20	NZ_CP046327.1	3452138-3452157	2	0.9
NZ_CP046327_11	11.21\|3571222\|20\|NZ_CP046327\|CRT	3571222-3571241	20	NZ_CP046327.1	3452147-3452166	2	0.9
NZ_CP046327_11	11.21\|3571222\|20\|NZ_CP046327\|CRT	3571222-3571241	20	NZ_CP046327.1	3453029-3453048	2	0.9

1. spacer 11.4|3570358|20|NZ_CP046327|CRT matches to position: 3452174-3452193, mismatch: 0, identity: 1.0

aataacaggtccaacaggag	CRISPR spacer
aataacaggtccaacaggag	Protospacer
********************

2. spacer 11.4|3570358|20|NZ_CP046327|CRT matches to position: 3452354-3452373, mismatch: 0, identity: 1.0

aataacaggtccaacaggag	CRISPR spacer
aataacaggtccaacaggag	Protospacer
********************

3. spacer 11.21|3571222|20|NZ_CP046327|CRT matches to position: 3452225-3452244, mismatch: 1, identity: 0.95

tccaacaggaccaacaggag	CRISPR spacer
tccaacaggcccaacaggag	Protospacer
********* **********

4. spacer 11.21|3571222|20|NZ_CP046327|CRT matches to position: 3452363-3452382, mismatch: 1, identity: 0.95

tccaacaggaccaacaggag	CRISPR spacer
tccaacaggagcaacaggag	Protospacer
********** *********

5. spacer 11.5|3570403|20|NZ_CP046327|CRT matches to position: 1444642-1444661, mismatch: 2, identity: 0.9

aataacaggtccaaccggaa	CRISPR spacer
aataacaggtccaagtggaa	Protospacer
************** .****

6. spacer 11.7|3570493|20|NZ_CP046327|CRT matches to position: 48562-48581, mismatch: 2, identity: 0.9

aataacaggtccaacaggaa	CRISPR spacer
aataacaggtgaaacaggaa	Protospacer
**********  ********

7. spacer 11.7|3570493|20|NZ_CP046327|CRT matches to position: 1444642-1444661, mismatch: 2, identity: 0.9

aataacaggtccaacaggaa	CRISPR spacer
aataacaggtccaagtggaa	Protospacer
**************  ****

8. spacer 11.10|3570628|20|NZ_CP046327|CRT matches to position: 3452216-3452235, mismatch: 2, identity: 0.9

agtaacaggtgctacaggcc	CRISPR spacer
agtaacaggtccaacaggcc	Protospacer
********** * *******

9. spacer 11.19|3571132|20|NZ_CP046327|CRT matches to position: 3452372-3452391, mismatch: 2, identity: 0.9

agcgaccggagcaacagggg	CRISPR spacer
agcaacaggagcaacagggg	Protospacer
***.** *************

10. spacer 11.19|3571132|20|NZ_CP046327|CRT matches to position: 3453182-3453201, mismatch: 2, identity: 0.9

agcgaccggagcaacagggg	CRISPR spacer
agcaacgggagcaacagggg	Protospacer
***.** *************

11. spacer 11.21|3571222|20|NZ_CP046327|CRT matches to position: 3452138-3452157, mismatch: 2, identity: 0.9

tccaacaggaccaacaggag	CRISPR spacer
tccaacaggtccaacgggag	Protospacer
********* *****.****

12. spacer 11.21|3571222|20|NZ_CP046327|CRT matches to position: 3452147-3452166, mismatch: 2, identity: 0.9

tccaacaggaccaacaggag	CRISPR spacer
tccaacgggagcaacaggag	Protospacer
******.*** *********

13. spacer 11.21|3571222|20|NZ_CP046327|CRT matches to position: 3453029-3453048, mismatch: 2, identity: 0.9

tccaacaggaccaacaggag	CRISPR spacer
tccaacaggagcaaccggag	Protospacer
********** **** ****

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP046327_2	2.6\|801998\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder	801998-802035	38	HM568888	Clostridium phage phiCD38-2, complete genome	723-760	0	1.0
NZ_CP046327_3	3.5\|1151918\|37\|NZ_CP046327\|CRISPRCasFinder,CRT,PILER-CR	1151918-1151954	37	NC_048665	Clostridium phage phiCDHM14, complete genome	32222-32258	0	1.0
NZ_CP046327_3	3.5\|1151918\|37\|NZ_CP046327\|CRISPRCasFinder,CRT,PILER-CR	1151918-1151954	37	JX145342	Clostridium phage phiMMP04, complete genome	31272-31308	0	1.0
NZ_CP046327_3	3.5\|1151918\|37\|NZ_CP046327\|CRISPRCasFinder,CRT,PILER-CR	1151918-1151954	37	NC_028838	Clostridium phage phiCD506, complete genome	35-71	0	1.0
NZ_CP046327_3	3.5\|1151918\|37\|NZ_CP046327\|CRISPRCasFinder,CRT,PILER-CR	1151918-1151954	37	HG796225	Clostridium phage phiCDHM13 complete genome	33172-33208	0	1.0
NZ_CP046327_3	3.5\|1151918\|37\|NZ_CP046327\|CRISPRCasFinder,CRT,PILER-CR	1151918-1151954	37	LN681538	Clostridium phage phiCD481-1, complete genome	58-94	0	1.0
NZ_CP046327_3	3.12\|1152380\|38\|NZ_CP046327\|CRISPRCasFinder,CRT,PILER-CR	1152380-1152417	38	GU949551	Clostridium phage phiCD6356, complete genome	4418-4455	0	1.0
NZ_CP046327_7	7.5\|1495953\|37\|NZ_CP046327\|CRISPRCasFinder,CRT,PILER-CR	1495953-1495989	37	HM568888	Clostridium phage phiCD38-2, complete genome	3348-3384	0	1.0
NZ_CP046327_8	8.1\|1704833\|37\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1704833-1704869	37	LN681539	Clostridium phage phiCD505, complete genome	47022-47058	0	1.0
NZ_CP046327_8	8.1\|1704833\|37\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1704833-1704869	37	NC_011398	Clostridium phage phiCD27, complete genome	46321-46357	0	1.0
NZ_CP046327_8	8.1\|1704833\|37\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1704833-1704869	37	NC_048642	Clostridium phage CDKM9, complete genome	47466-47502	0	1.0
NZ_CP046327_8	8.7\|1705230\|37\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705230-1705266	37	GU949551	Clostridium phage phiCD6356, complete genome	22302-22338	0	1.0
NZ_CP046327_8	8.14\|1705696\|37\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705696-1705732	37	MK473382	Clostridium phage JD032, complete genome	34305-34341	0	1.0
NZ_CP046327_10	10.1\|2861390\|28\|NZ_CP046327\|CRISPRCasFinder	2861390-2861417	28	NZ_CP033215	Clostridioides difficile strain 12038 plasmid unnamed1, complete sequence	5105-5132	0	1.0
NZ_CP046327_13	13.1\|3934453\|39\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	3934453-3934491	39	NZ_CP020425	Clostridioides difficile strain FDAARGOS_267 plasmid unnamed1, complete sequence	36276-36314	0	1.0
NZ_CP046327_13	13.1\|3934453\|39\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	3934453-3934491	39	FN668942	Clostridium difficile BI1 plasmid pCDBI1, complete sequence	35011-35049	0	1.0
NZ_CP046327_13	13.1\|3934453\|39\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	3934453-3934491	39	NZ_CP011969	Clostridioides difficile ATCC 9689 = DSM 1296 plasmid unnamed, complete sequence	31598-31636	0	1.0
NZ_CP046327_13	13.2\|3934521\|36\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	3934521-3934556	36	NZ_CP020425	Clostridioides difficile strain FDAARGOS_267 plasmid unnamed1, complete sequence	39403-39438	0	1.0
NZ_CP046327_13	13.2\|3934521\|36\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	3934521-3934556	36	FN668942	Clostridium difficile BI1 plasmid pCDBI1, complete sequence	38136-38171	0	1.0
NZ_CP046327_13	13.2\|3934521\|36\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	3934521-3934556	36	NZ_CP011969	Clostridioides difficile ATCC 9689 = DSM 1296 plasmid unnamed, complete sequence	34725-34760	0	1.0
NZ_CP046327_13	13.10\|3935053\|37\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	3935053-3935089	37	JX145341	Clostridium phage phiMMP02, complete genome	41433-41469	0	1.0
NZ_CP046327_13	13.17\|3935514\|37\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	3935514-3935550	37	NZ_CP020426	Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence	2066-2102	0	1.0
NZ_CP046327_13	13.17\|3935514\|37\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	3935514-3935550	37	CP011970	Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence	119898-119934	0	1.0
NZ_CP046327_13	13.17\|3935514\|37\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	3935514-3935550	37	LN681537	Clostridium phage phiCD211, complete genome	128760-128796	0	1.0
NZ_CP046327_13	13.18\|3935580\|36\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	3935580-3935615	36	MF547662	Clostridioides phage LIBA6276, complete genome	121180-121215	0	1.0
NZ_CP046327_13	13.18\|3935580\|36\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	3935580-3935615	36	MF547663	Clostridioides phage LIBA2945, complete genome	119443-119478	0	1.0
NZ_CP046327_2	2.5\|801932\|37\|NZ_CP046327\|PILER-CR,CRISPRCasFinder	801932-801968	37	LN681539	Clostridium phage phiCD505, complete genome	19142-19178	1	0.973
NZ_CP046327_2	2.5\|801932\|37\|NZ_CP046327\|PILER-CR,CRISPRCasFinder	801932-801968	37	JX145341	Clostridium phage phiMMP02, complete genome	19048-19084	1	0.973
NZ_CP046327_2	2.5\|801932\|37\|NZ_CP046327\|PILER-CR,CRISPRCasFinder	801932-801968	37	NC_048642	Clostridium phage CDKM9, complete genome	19080-19116	1	0.973
NZ_CP046327_2	2.5\|801932\|37\|NZ_CP046327\|PILER-CR,CRISPRCasFinder	801932-801968	37	KX228400	Clostridium phage CDKM15, complete genome	22285-22321	1	0.973
NZ_CP046327_2	2.15\|801997\|39\|NZ_CP046327\|CRT	801997-802035	39	HM568888	Clostridium phage phiCD38-2, complete genome	723-761	1	0.974
NZ_CP046327_3	3.6\|1151984\|36\|NZ_CP046327\|CRISPRCasFinder,CRT,PILER-CR	1151984-1152019	36	GU949551	Clostridium phage phiCD6356, complete genome	36548-36583	1	0.972
NZ_CP046327_7	7.5\|1495953\|37\|NZ_CP046327\|CRISPRCasFinder,CRT,PILER-CR	1495953-1495989	37	LN881738	Escherichia phage slur17, complete genome	17081-17117	1	0.973
NZ_CP046327_7	7.5\|1495953\|37\|NZ_CP046327\|CRISPRCasFinder,CRT,PILER-CR	1495953-1495989	37	KU057941	Clostridium phage CDSH1, complete genome	3320-3356	1	0.973
NZ_CP046327_7	7.5\|1495953\|37\|NZ_CP046327\|CRISPRCasFinder,CRT,PILER-CR	1495953-1495989	37	NC_028905	Clostridium phage phiCD111, complete genome	3348-3384	1	0.973
NZ_CP046327_7	7.5\|1495953\|37\|NZ_CP046327\|CRISPRCasFinder,CRT,PILER-CR	1495953-1495989	37	LN680009	Clostridium phage phiCDHS1 gp03 gene for putative portal capsid protein	1303-1339	1	0.973
NZ_CP046327_7	7.7\|1496086\|38\|NZ_CP046327\|CRISPRCasFinder,CRT,PILER-CR	1496086-1496123	38	KU057941	Clostridium phage CDSH1, complete genome	38647-38684	1	0.974
NZ_CP046327_7	7.7\|1496086\|38\|NZ_CP046327\|CRISPRCasFinder,CRT,PILER-CR	1496086-1496123	38	HM568888	Clostridium phage phiCD38-2, complete genome	38145-38182	1	0.974
NZ_CP046327_7	7.7\|1496086\|38\|NZ_CP046327\|CRISPRCasFinder,CRT,PILER-CR	1496086-1496123	38	LN881738	Escherichia phage slur17, complete genome	23372-23409	1	0.974
NZ_CP046327_8	8.1\|1704833\|37\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1704833-1704869	37	LN681542	Clostridium phage phiMMP03, complete genome	48822-48858	1	0.973
NZ_CP046327_8	8.1\|1704833\|37\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1704833-1704869	37	NC_009231	Clostridium phage phiC2, complete genome	52360-52396	1	0.973
NZ_CP046327_8	8.10\|1705431\|37\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705431-1705467	37	NC_028958	Clostridium phage phiCD146, complete genome	8007-8043	1	0.973
NZ_CP046327_9	9.1\|2283810\|37\|NZ_CP046327\|CRISPRCasFinder	2283810-2283846	37	NZ_MG973074	Clostridioides difficile strain HSJD-312 plasmid pHSJD-312, complete sequence	49042-49078	1	0.973
NZ_CP046327_11	11.21\|3571222\|20\|NZ_CP046327\|CRT	3571222-3571241	20	NZ_CP012101	Bacillus thuringiensis strain HS18-1 plasmid pHS18-2, complete sequence	134400-134419	1	0.95
NZ_CP046327_11	11.21\|3571222\|20\|NZ_CP046327\|CRT	3571222-3571241	20	CP013001	Bacillus thuringiensis strain XL6 plasmid, complete sequence	355369-355388	1	0.95
NZ_CP046327_11	11.21\|3571222\|20\|NZ_CP046327\|CRT	3571222-3571241	20	CP013001	Bacillus thuringiensis strain XL6 plasmid, complete sequence	355603-355622	1	0.95
NZ_CP046327_11	11.21\|3571222\|20\|NZ_CP046327\|CRT	3571222-3571241	20	CP013001	Bacillus thuringiensis strain XL6 plasmid, complete sequence	355630-355649	1	0.95
NZ_CP046327_11	11.21\|3571222\|20\|NZ_CP046327\|CRT	3571222-3571241	20	MN693263	Marine virus AFVG_25M296, complete genome	14161-14180	1	0.95
NZ_CP046327_11	11.21\|3571222\|20\|NZ_CP046327\|CRT	3571222-3571241	20	MN693968	Marine virus AFVG_250M909, complete genome	17558-17577	1	0.95
NZ_CP046327_12	12.8\|3688907\|36\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	3688907-3688942	36	NZ_CP020426	Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence	56560-56595	1	0.972
NZ_CP046327_12	12.8\|3688907\|36\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	3688907-3688942	36	NZ_CP029155	Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence	118780-118815	1	0.972
NZ_CP046327_12	12.8\|3688907\|36\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	3688907-3688942	36	CP011970	Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence	65405-65440	1	0.972
NZ_CP046327_12	12.8\|3688907\|36\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	3688907-3688942	36	LN681537	Clostridium phage phiCD211, complete genome	74267-74302	1	0.972
NZ_CP046327_13	13.16\|3935448\|37\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	3935448-3935484	37	NZ_CP020426	Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence	448-484	1	0.973
NZ_CP046327_13	13.16\|3935448\|37\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	3935448-3935484	37	CP011970	Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence	121516-121552	1	0.973
NZ_CP046327_13	13.16\|3935448\|37\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	3935448-3935484	37	LN681537	Clostridium phage phiCD211, complete genome	130378-130414	1	0.973
NZ_CP046327_2	2.5\|801932\|37\|NZ_CP046327\|PILER-CR,CRISPRCasFinder	801932-801968	37	NC_011398	Clostridium phage phiCD27, complete genome	19163-19199	2	0.946
NZ_CP046327_2	2.6\|801998\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder	801998-802035	38	LN881738	Escherichia phage slur17, complete genome	19705-19742	2	0.947
NZ_CP046327_2	2.6\|801998\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder	801998-802035	38	KU057941	Clostridium phage CDSH1, complete genome	695-732	2	0.947
NZ_CP046327_2	2.6\|801998\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder	801998-802035	38	NC_028905	Clostridium phage phiCD111, complete genome	723-760	2	0.947
NZ_CP046327_2	2.6\|801998\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder	801998-802035	38	NC_028958	Clostridium phage phiCD146, complete genome	728-765	2	0.947
NZ_CP046327_2	2.14\|801931\|38\|NZ_CP046327\|CRT	801931-801968	38	LN681539	Clostridium phage phiCD505, complete genome	19142-19179	2	0.947
NZ_CP046327_2	2.14\|801931\|38\|NZ_CP046327\|CRT	801931-801968	38	JX145341	Clostridium phage phiMMP02, complete genome	19048-19085	2	0.947
NZ_CP046327_2	2.14\|801931\|38\|NZ_CP046327\|CRT	801931-801968	38	NC_048642	Clostridium phage CDKM9, complete genome	19080-19117	2	0.947
NZ_CP046327_2	2.14\|801931\|38\|NZ_CP046327\|CRT	801931-801968	38	KX228400	Clostridium phage CDKM15, complete genome	22285-22322	2	0.947
NZ_CP046327_3	3.5\|1151918\|37\|NZ_CP046327\|CRISPRCasFinder,CRT,PILER-CR	1151918-1151954	37	NC_008226	Clostridioides difficile 630 plasmid pCD630, complete sequence	5142-5178	2	0.946
NZ_CP046327_3	3.5\|1151918\|37\|NZ_CP046327\|CRISPRCasFinder,CRT,PILER-CR	1151918-1151954	37	NZ_CP016319	Clostridioides difficile strain 630 delta erm plasmid pCD630, complete sequence	163-199	2	0.946
NZ_CP046327_7	7.9\|1496220\|36\|NZ_CP046327\|CRISPRCasFinder,CRT,PILER-CR	1496220-1496255	36	NC_028838	Clostridium phage phiCD506, complete genome	25906-25941	2	0.944
NZ_CP046327_8	8.10\|1705431\|37\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705431-1705467	37	HM568888	Clostridium phage phiCD38-2, complete genome	7995-8031	2	0.946
NZ_CP046327_8	8.12\|1705565\|35\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705565-1705599	35	NC_011398	Clostridium phage phiCD27, complete genome	47316-47350	2	0.943
NZ_CP046327_12	12.5\|3688708\|36\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	3688708-3688743	36	GU949551	Clostridium phage phiCD6356, complete genome	9291-9326	2	0.944
NZ_CP046327_13	13.6\|3934784\|36\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	3934784-3934819	36	GU949551	Clostridium phage phiCD6356, complete genome	12962-12997	2	0.944
NZ_CP046327_13	13.16\|3935448\|37\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	3935448-3935484	37	NZ_CP029155	Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence	43710-43746	2	0.946
NZ_CP046327_13	13.20\|3935711\|37\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	3935711-3935747	37	MF547662	Clostridioides phage LIBA6276, complete genome	123631-123667	2	0.946
NZ_CP046327_13	13.20\|3935711\|37\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	3935711-3935747	37	MF547663	Clostridioides phage LIBA2945, complete genome	121894-121930	2	0.946
NZ_CP046327_2	2.14\|801931\|38\|NZ_CP046327\|CRT	801931-801968	38	NC_011398	Clostridium phage phiCD27, complete genome	19163-19200	3	0.921
NZ_CP046327_2	2.15\|801997\|39\|NZ_CP046327\|CRT	801997-802035	39	KU057941	Clostridium phage CDSH1, complete genome	695-733	3	0.923
NZ_CP046327_2	2.15\|801997\|39\|NZ_CP046327\|CRT	801997-802035	39	NC_028905	Clostridium phage phiCD111, complete genome	723-761	3	0.923
NZ_CP046327_2	2.15\|801997\|39\|NZ_CP046327\|CRT	801997-802035	39	NC_028958	Clostridium phage phiCD146, complete genome	728-766	3	0.923
NZ_CP046327_2	2.15\|801997\|39\|NZ_CP046327\|CRT	801997-802035	39	LN881738	Escherichia phage slur17, complete genome	19704-19742	3	0.923
NZ_CP046327_3	3.5\|1151918\|37\|NZ_CP046327\|CRISPRCasFinder,CRT,PILER-CR	1151918-1151954	37	NZ_MG266000	Clostridioides difficile strain 7032985 plasmid pCD-ISS1, complete sequence	5148-5184	3	0.919
NZ_CP046327_5	5.5\|1292303\|36\|NZ_CP046327\|CRISPRCasFinder,CRT,PILER-CR	1292303-1292338	36	NZ_CP029155	Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence	17906-17941	3	0.917
NZ_CP046327_7	7.2\|1495758\|37\|NZ_CP046327\|CRISPRCasFinder,CRT,PILER-CR	1495758-1495794	37	NZ_CP020425	Clostridioides difficile strain FDAARGOS_267 plasmid unnamed1, complete sequence	6906-6942	3	0.919
NZ_CP046327_7	7.2\|1495758\|37\|NZ_CP046327\|CRISPRCasFinder,CRT,PILER-CR	1495758-1495794	37	NZ_CP011969	Clostridioides difficile ATCC 9689 = DSM 1296 plasmid unnamed, complete sequence	2228-2264	3	0.919
NZ_CP046327_7	7.2\|1495758\|37\|NZ_CP046327\|CRISPRCasFinder,CRT,PILER-CR	1495758-1495794	37	NZ_CP029156	Clostridioides difficile strain CD161 plasmid unnamed2, complete sequence	40717-40753	3	0.919
NZ_CP046327_7	7.2\|1495758\|37\|NZ_CP046327\|CRISPRCasFinder,CRT,PILER-CR	1495758-1495794	37	NZ_CP029153	Clostridioides difficile strain CDT4 plasmid unnamed1, complete sequence	34761-34797	3	0.919
NZ_CP046327_8	8.5\|1705098\|37\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705098-1705134	37	GU949551	Clostridium phage phiCD6356, complete genome	1435-1471	3	0.919
NZ_CP046327_11	11.3\|3570304\|29\|NZ_CP046327\|CRT	3570304-3570332	29	CP013001	Bacillus thuringiensis strain XL6 plasmid, complete sequence	355549-355577	3	0.897
NZ_CP046327_11	11.3\|3570304\|29\|NZ_CP046327\|CRT	3570304-3570332	29	CP013001	Bacillus thuringiensis strain XL6 plasmid, complete sequence	355666-355694	3	0.897
NZ_CP046327_12	12.7\|3688839\|39\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	3688839-3688877	39	JX145342	Clostridium phage phiMMP04, complete genome	7668-7706	3	0.923
NZ_CP046327_2	2.19\|802262\|31\|NZ_CP046327\|CRT	802262-802292	31	NZ_CP014419	Staphylococcus aureus strain USA300-SUR15 plasmid pUSA08-1-SUR15, complete sequence	14287-14317	4	0.871
NZ_CP046327_3	3.5\|1151918\|37\|NZ_CP046327\|CRISPRCasFinder,CRT,PILER-CR	1151918-1151954	37	MK473382	Clostridium phage JD032, complete genome	35069-35105	4	0.892
NZ_CP046327_7	7.9\|1496220\|36\|NZ_CP046327\|CRISPRCasFinder,CRT,PILER-CR	1496220-1496255	36	JX145342	Clostridium phage phiMMP04, complete genome	23777-23812	4	0.889
NZ_CP046327_11	11.3\|3570304\|29\|NZ_CP046327\|CRT	3570304-3570332	29	CP013001	Bacillus thuringiensis strain XL6 plasmid, complete sequence	355504-355532	4	0.862
NZ_CP046327_11	11.3\|3570304\|29\|NZ_CP046327\|CRT	3570304-3570332	29	CP013001	Bacillus thuringiensis strain XL6 plasmid, complete sequence	355747-355775	4	0.862
NZ_CP046327_11	11.3\|3570304\|29\|NZ_CP046327\|CRT	3570304-3570332	29	CP013001	Bacillus thuringiensis strain XL6 plasmid, complete sequence	355387-355415	4	0.862
NZ_CP046327_11	11.3\|3570304\|29\|NZ_CP046327\|CRT	3570304-3570332	29	CP013001	Bacillus thuringiensis strain XL6 plasmid, complete sequence	355774-355802	4	0.862
NZ_CP046327_13	13.12\|3935185\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	3935185-3935222	38	JX145341	Clostridium phage phiMMP02, complete genome	38170-38207	4	0.895
NZ_CP046327_11	11.3\|3570304\|29\|NZ_CP046327\|CRT	3570304-3570332	29	NZ_CP012105	Bacillus thuringiensis strain HS18-1 plasmid pHS18-6, complete sequence	999-1027	5	0.828
NZ_CP046327_11	11.3\|3570304\|29\|NZ_CP046327\|CRT	3570304-3570332	29	MN693968	Marine virus AFVG_250M909, complete genome	17684-17712	5	0.828
NZ_CP046327_8	8.14\|1705696\|37\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705696-1705732	37	NC_048665	Clostridium phage phiCDHM14, complete genome	338-374	6	0.838
NZ_CP046327_8	8.14\|1705696\|37\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705696-1705732	37	NC_028838	Clostridium phage phiCD506, complete genome	798-834	6	0.838
NZ_CP046327_8	8.14\|1705696\|37\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705696-1705732	37	HG796225	Clostridium phage phiCDHM13 complete genome	338-374	6	0.838
NZ_CP046327_8	8.14\|1705696\|37\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705696-1705732	37	LN681538	Clostridium phage phiCD481-1, complete genome	821-857	6	0.838
NZ_CP046327_8	8.14\|1705696\|37\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705696-1705732	37	HG798901	Clostridium phage phiCDHM11 complete genome	338-374	6	0.838
NZ_CP046327_10	10.1\|2861390\|28\|NZ_CP046327\|CRISPRCasFinder	2861390-2861417	28	KY971610	Pseudomonas phage PspYZU05, complete genome	134240-134267	6	0.786
NZ_CP046327_11	11.3\|3570304\|29\|NZ_CP046327\|CRT	3570304-3570332	29	CP013001	Bacillus thuringiensis strain XL6 plasmid, complete sequence	355315-355343	6	0.793
NZ_CP046327_11	11.3\|3570304\|29\|NZ_CP046327\|CRT	3570304-3570332	29	NZ_CP012105	Bacillus thuringiensis strain HS18-1 plasmid pHS18-6, complete sequence	1008-1036	6	0.793
NZ_CP046327_11	11.3\|3570304\|29\|NZ_CP046327\|CRT	3570304-3570332	29	MN694558	Marine virus AFVG_250M9, complete genome	20691-20719	6	0.793
NZ_CP046327_11	11.3\|3570304\|29\|NZ_CP046327\|CRT	3570304-3570332	29	MN693383	Marine virus AFVG_25M295, complete genome	19067-19095	6	0.793
NZ_CP046327_11	11.3\|3570304\|29\|NZ_CP046327\|CRT	3570304-3570332	29	MN693263	Marine virus AFVG_25M296, complete genome	14395-14423	6	0.793
NZ_CP046327_11	11.3\|3570304\|29\|NZ_CP046327\|CRT	3570304-3570332	29	MN694393	Marine virus AFVG_250M420, complete genome	18137-18165	6	0.793
NZ_CP046327_11	11.3\|3570304\|29\|NZ_CP046327\|CRT	3570304-3570332	29	MH629685	Synechococcus virus S-PRM1, complete genome	127405-127433	6	0.793
NZ_CP046327_11	11.3\|3570304\|29\|NZ_CP046327\|CRT	3570304-3570332	29	MN694640	Marine virus AFVG_250M10, complete genome	20703-20731	6	0.793
NZ_CP046327_11	11.3\|3570304\|29\|NZ_CP046327\|CRT	3570304-3570332	29	NZ_CP017076	Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence	1323953-1323981	6	0.793
NZ_CP046327_2	2.19\|802262\|31\|NZ_CP046327\|CRT	802262-802292	31	NZ_CP007752	Campylobacter jejuni subsp. jejuni D42a plasmid pTet-D42a, complete sequence	38371-38401	7	0.774
NZ_CP046327_2	2.19\|802262\|31\|NZ_CP046327\|CRT	802262-802292	31	NZ_CP017026	Campylobacter coli plasmid pCC14983A-1, complete sequence	111425-111455	7	0.774
NZ_CP046327_2	2.19\|802262\|31\|NZ_CP046327\|CRT	802262-802292	31	NZ_CP007182	Campylobacter coli RM4661 plasmid pRM4661_48kbp, complete sequence	32132-32162	7	0.774
NZ_CP046327_6	6.3\|1384914\|37\|NZ_CP046327\|CRISPRCasFinder,CRT,PILER-CR	1384914-1384950	37	MF417840	Uncultured Caudovirales phage clone 2AX_3, partial genome	5012-5048	7	0.811
NZ_CP046327_11	11.3\|3570304\|29\|NZ_CP046327\|CRT	3570304-3570332	29	MN693383	Marine virus AFVG_25M295, complete genome	19094-19122	7	0.759
NZ_CP046327_11	11.3\|3570304\|29\|NZ_CP046327\|CRT	3570304-3570332	29	MN693263	Marine virus AFVG_25M296, complete genome	14161-14189	7	0.759
NZ_CP046327_11	11.3\|3570304\|29\|NZ_CP046327\|CRT	3570304-3570332	29	MN693263	Marine virus AFVG_25M296, complete genome	14422-14450	7	0.759
NZ_CP046327_11	11.3\|3570304\|29\|NZ_CP046327\|CRT	3570304-3570332	29	NZ_CP040345	Bacillus albus strain DLOU-Yingkou plasmid unnamed1, complete sequence	244825-244853	7	0.759
NZ_CP046327_11	11.3\|3570304\|29\|NZ_CP046327\|CRT	3570304-3570332	29	AP014233	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C92-MedDCM-OCT-S33-C95, * SEQUENCING IN PROGRESS *	23425-23453	7	0.759
NZ_CP046327_11	11.3\|3570304\|29\|NZ_CP046327\|CRT	3570304-3570332	29	MN693278	Marine virus AFVG_25M482, complete genome	13792-13820	7	0.759
NZ_CP046327_11	11.13\|3570817\|29\|NZ_CP046327\|CRT	3570817-3570845	29	MN480762	Streptococcus salivarius strain NU10 plasmid pSsal-NU10, complete sequence	176919-176947	7	0.759
NZ_CP046327_11	11.16\|3570961\|29\|NZ_CP046327\|CRT	3570961-3570989	29	MG945903	UNVERIFIED: Microviridae sp. isolate 3021-1711, partial genome	3655-3683	7	0.759
NZ_CP046327_2	2.7\|802065\|37\|NZ_CP046327\|PILER-CR,CRISPRCasFinder	802065-802101	37	NZ_CP034684	Bacillus sp. BD59S plasmid pBTBD59S1, complete sequence	35137-35173	8	0.784
NZ_CP046327_2	2.19\|802262\|31\|NZ_CP046327\|CRT	802262-802292	31	NZ_CP053971	Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed3, complete sequence	12400-12430	8	0.742
NZ_CP046327_2	2.19\|802262\|31\|NZ_CP046327\|CRT	802262-802292	31	NZ_CP039724	Bacillus thuringiensis strain BT-59 plasmid p3, complete sequence	70259-70289	8	0.742
NZ_CP046327_2	2.19\|802262\|31\|NZ_CP046327\|CRT	802262-802292	31	NZ_CP013278	Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-3-235K, complete sequence	63045-63075	8	0.742
NZ_CP046327_2	2.19\|802262\|31\|NZ_CP046327\|CRT	802262-802292	31	NC_018509	Bacillus thuringiensis HD-789 plasmid pBTHD789-2, complete sequence	56929-56959	8	0.742
NZ_CP046327_2	2.19\|802262\|31\|NZ_CP046327\|CRT	802262-802292	31	NZ_CP051859	Bacillus thuringiensis serovar israelensis strain BGSC 4Q7rifR plasmid pBtic235, complete sequence	169573-169603	8	0.742
NZ_CP046327_2	2.19\|802262\|31\|NZ_CP046327\|CRT	802262-802292	31	NZ_CP009347	Bacillus thuringiensis HD1002 plasmid 3, complete sequence	208329-208359	8	0.742
NZ_CP046327_2	2.19\|802262\|31\|NZ_CP046327\|CRT	802262-802292	31	NZ_CP045025	Bacillus thuringiensis strain JW-1 plasmid p3, complete sequence	63045-63075	8	0.742
NZ_CP046327_2	2.19\|802262\|31\|NZ_CP046327\|CRT	802262-802292	31	NC_014633	Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence	857477-857507	8	0.742
NZ_CP046327_3	3.6\|1151984\|36\|NZ_CP046327\|CRISPRCasFinder,CRT,PILER-CR	1151984-1152019	36	NZ_AP017932	Lactobacillus sakei strain LK-145 plasmid pLs145-a, complete sequence	32832-32867	8	0.778
NZ_CP046327_7	7.9\|1496220\|36\|NZ_CP046327\|CRISPRCasFinder,CRT,PILER-CR	1496220-1496255	36	MK373783	Escherichia phage vB_EcoM_KWBSE43-6, complete genome	127068-127103	8	0.778
NZ_CP046327_8	8.6\|1705164\|37\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705164-1705200	37	MN856006	Siphoviridae sp. isolate 29, complete genome	2302-2338	8	0.784
NZ_CP046327_8	8.6\|1705164\|37\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705164-1705200	37	KU057941	Clostridium phage CDSH1, complete genome	41439-41475	8	0.784
NZ_CP046327_8	8.6\|1705164\|37\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705164-1705200	37	LN881738	Escherichia phage slur17, complete genome	20581-20617	8	0.784
NZ_CP046327_8	8.6\|1705164\|37\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705164-1705200	37	NC_028905	Clostridium phage phiCD111, complete genome	41408-41444	8	0.784
NZ_CP046327_8	8.6\|1705164\|37\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705164-1705200	37	HM568888	Clostridium phage phiCD38-2, complete genome	40938-40974	8	0.784
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	NZ_CP020005	Bacillus thuringiensis strain Bacillus thuringiensis L-7601 plasmid unnamed3, complete sequence	378783-378820	8	0.789
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	NC_007021	Staphylococcus phage Twort, complete genome	125111-125148	8	0.789
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	MT151386	Staphylococcus virus Twort, complete genome	36934-36971	8	0.789
NZ_CP046327_11	11.3\|3570304\|29\|NZ_CP046327\|CRT	3570304-3570332	29	MT375525	Pelagibacter phage Greip EXVC02, complete genome	11953-11981	8	0.724
NZ_CP046327_2	2.7\|802065\|37\|NZ_CP046327\|PILER-CR,CRISPRCasFinder	802065-802101	37	NZ_CP009691	Bacillus mycoides strain ATCC 6462 plasmid pBMX_1, complete sequence	294136-294172	9	0.757
NZ_CP046327_2	2.16\|802064\|38\|NZ_CP046327\|CRT	802064-802101	38	NZ_CP034684	Bacillus sp. BD59S plasmid pBTBD59S1, complete sequence	35136-35173	9	0.763
NZ_CP046327_2	2.19\|802262\|31\|NZ_CP046327\|CRT	802262-802292	31	NC_011246	Borrelia recurrentis A1 plasmid pl124, complete sequence	62584-62614	9	0.71
NZ_CP046327_2	2.19\|802262\|31\|NZ_CP046327\|CRT	802262-802292	31	NC_011247	Borrelia duttonii Ly plasmid pl165, complete sequence	100908-100938	9	0.71
NZ_CP046327_2	2.19\|802262\|31\|NZ_CP046327\|CRT	802262-802292	31	NZ_CP028890	Borrelia turcica IST7 plasmid lp34, complete sequence	2064-2094	9	0.71
NZ_CP046327_2	2.19\|802262\|31\|NZ_CP046327\|CRT	802262-802292	31	NZ_CP017832	Butyrivibrio hungatei strain MB2003 plasmid pNP144, complete sequence	52592-52622	9	0.71
NZ_CP046327_3	3.6\|1151984\|36\|NZ_CP046327\|CRISPRCasFinder,CRT,PILER-CR	1151984-1152019	36	NZ_LN890332	Leuconostoc gelidum subsp. gasicomitatum KG16-1 isolate LEKG1 plasmid II, complete sequence	19456-19491	9	0.75
NZ_CP046327_3	3.6\|1151984\|36\|NZ_CP046327\|CRISPRCasFinder,CRT,PILER-CR	1151984-1152019	36	NZ_CP032750	Lactobacillus paraplantarum strain DSM 10667 plasmid unnamed6, complete sequence	11726-11761	9	0.75
NZ_CP046327_3	3.6\|1151984\|36\|NZ_CP046327\|CRISPRCasFinder,CRT,PILER-CR	1151984-1152019	36	NZ_CP042398	Leuconostoc citreum strain CBA3623 plasmid unnamed5, complete sequence	10132-10167	9	0.75
NZ_CP046327_3	3.6\|1151984\|36\|NZ_CP046327\|CRISPRCasFinder,CRT,PILER-CR	1151984-1152019	36	NZ_CP042376	Leuconostoc carnosum strain CBA3620 plasmid unnamed2, complete sequence	27080-27115	9	0.75
NZ_CP046327_3	3.6\|1151984\|36\|NZ_CP046327\|CRISPRCasFinder,CRT,PILER-CR	1151984-1152019	36	NZ_CP042400	Weissella hellenica strain CBA3632 plasmid unnamed1, complete sequence	36943-36978	9	0.75
NZ_CP046327_3	3.6\|1151984\|36\|NZ_CP046327\|CRISPRCasFinder,CRT,PILER-CR	1151984-1152019	36	NZ_CP014612	Leuconostoc mesenteroides subsp. jonggajibkimchii strain DRC1506 plasmid pDRC1, complete sequence	7827-7862	9	0.75
NZ_CP046327_3	3.6\|1151984\|36\|NZ_CP046327\|CRISPRCasFinder,CRT,PILER-CR	1151984-1152019	36	NZ_CP017200	Leuconostoc gelidum subsp. gasicomitatum strain TMW 2.1619 plasmid pL21619-3, complete genome	7159-7194	9	0.75
NZ_CP046327_3	3.6\|1151984\|36\|NZ_CP046327\|CRISPRCasFinder,CRT,PILER-CR	1151984-1152019	36	NZ_CP042384	Leuconostoc pseudomesenteroides strain CBA3630 plasmid unnamed1, complete sequence	11740-11775	9	0.75
NZ_CP046327_3	3.6\|1151984\|36\|NZ_CP046327\|CRISPRCasFinder,CRT,PILER-CR	1151984-1152019	36	NZ_CP012874	Weissella cibaria strain CH2 plasmid pMKC01, complete sequence	15401-15436	9	0.75
NZ_CP046327_3	3.6\|1151984\|36\|NZ_CP046327\|CRISPRCasFinder,CRT,PILER-CR	1151984-1152019	36	NZ_CP012876	Weissella cibaria strain CH2 plasmid pMKC03, complete sequence	6103-6138	9	0.75
NZ_CP046327_3	3.6\|1151984\|36\|NZ_CP046327\|CRISPRCasFinder,CRT,PILER-CR	1151984-1152019	36	NZ_CP012876	Weissella cibaria strain CH2 plasmid pMKC03, complete sequence	13134-13169	9	0.75
NZ_CP046327_3	3.6\|1151984\|36\|NZ_CP046327\|CRISPRCasFinder,CRT,PILER-CR	1151984-1152019	36	NZ_CP012876	Weissella cibaria strain CH2 plasmid pMKC03, complete sequence	20165-20200	9	0.75
NZ_CP046327_4	4.1\|1289886\|33\|NZ_CP046327\|CRISPRCasFinder	1289886-1289918	33	NZ_CP053838	Aliiarcobacter faecis strain CCUG 66484 plasmid pAFAEC, complete sequence	73614-73646	9	0.727
NZ_CP046327_4	4.1\|1289886\|33\|NZ_CP046327\|CRISPRCasFinder	1289886-1289918	33	NZ_CP032824	Arcobacter cryaerophilus ATCC 43158 plasmid pACRY43158, complete sequence	2020-2052	9	0.727
NZ_CP046327_4	4.1\|1289886\|33\|NZ_CP046327\|CRISPRCasFinder	1289886-1289918	33	NZ_MK715471	Arcobacter cryaerophilus strain M830MA plasmid pM830MA, complete sequence	60841-60873	9	0.727
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	NZ_CP020005	Bacillus thuringiensis strain Bacillus thuringiensis L-7601 plasmid unnamed3, complete sequence	378795-378832	9	0.763
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	NZ_CP011375	Moraxella bovoculi strain 58069 plasmid unnamed, complete sequence	2859-2896	9	0.763
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	NZ_CP040345	Bacillus albus strain DLOU-Yingkou plasmid unnamed1, complete sequence	43977-44014	9	0.763
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	NZ_CP009698	Bacillus anthracis strain BA1035 plasmid pXO2, complete sequence	72199-72236	9	0.763
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	NZ_CP009542	Bacillus anthracis strain BA1015 plasmid pXO2, complete sequence	54338-54375	9	0.763
NZ_CP046327_9	9.1\|2283810\|37\|NZ_CP046327\|CRISPRCasFinder	2283810-2283846	37	NC_022879	Enterococcus mundtii QU 25 plasmid pQY182, complete sequence	9006-9042	9	0.757
NZ_CP046327_13	13.16\|3935448\|37\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	3935448-3935484	37	NZ_CP033246	Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence	212802-212838	9	0.757
NZ_CP046327_13	13.16\|3935448\|37\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	3935448-3935484	37	NZ_CP033248	Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence	212842-212878	9	0.757
NZ_CP046327_2	2.16\|802064\|38\|NZ_CP046327\|CRT	802064-802101	38	NZ_CP009691	Bacillus mycoides strain ATCC 6462 plasmid pBMX_1, complete sequence	294136-294173	10	0.737
NZ_CP046327_3	3.5\|1151918\|37\|NZ_CP046327\|CRISPRCasFinder,CRT,PILER-CR	1151918-1151954	37	HG798901	Clostridium phage phiCDHM11 complete genome	31575-31611	10	0.73
NZ_CP046327_3	3.6\|1151984\|36\|NZ_CP046327\|CRISPRCasFinder,CRT,PILER-CR	1151984-1152019	36	NZ_CP033609	Weissella hellenica strain 0916-4-2 plasmid pWHSP041, complete sequence	30210-30245	10	0.722
NZ_CP046327_4	4.1\|1289886\|33\|NZ_CP046327\|CRISPRCasFinder	1289886-1289918	33	AP019525	Tenacibaculum phage PTm5 DNA, complete genome	76997-77029	10	0.697
NZ_CP046327_4	4.1\|1289886\|33\|NZ_CP046327\|CRISPRCasFinder	1289886-1289918	33	AP019524	Tenacibaculum phage PTm1 DNA, complete genome	77006-77038	10	0.697
NZ_CP046327_4	4.5\|1289886\|34\|NZ_CP046327\|CRT	1289886-1289919	34	NZ_CP032824	Arcobacter cryaerophilus ATCC 43158 plasmid pACRY43158, complete sequence	2020-2053	10	0.706
NZ_CP046327_4	4.5\|1289886\|34\|NZ_CP046327\|CRT	1289886-1289919	34	NZ_MK715471	Arcobacter cryaerophilus strain M830MA plasmid pM830MA, complete sequence	60841-60874	10	0.706
NZ_CP046327_4	4.5\|1289886\|34\|NZ_CP046327\|CRT	1289886-1289919	34	NZ_CP053838	Aliiarcobacter faecis strain CCUG 66484 plasmid pAFAEC, complete sequence	73613-73646	10	0.706
NZ_CP046327_4	4.5\|1289886\|34\|NZ_CP046327\|CRT	1289886-1289919	34	AP019525	Tenacibaculum phage PTm5 DNA, complete genome	76997-77030	10	0.706
NZ_CP046327_4	4.5\|1289886\|34\|NZ_CP046327\|CRT	1289886-1289919	34	AP019524	Tenacibaculum phage PTm1 DNA, complete genome	77006-77039	10	0.706
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	KY554775	Lactococcus phage AM11, complete genome	45977-46014	10	0.737
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	KY554773	Lactococcus phage AM8, complete genome	45976-46013	10	0.737
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	KY554769	Lactococcus phage AM2, complete genome	46201-46238	10	0.737
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	KY554770	Lactococcus phage AM3, complete genome	46578-46615	10	0.737
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	KY554776	Lactococcus phage AM12, complete genome	45958-45995	10	0.737
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	KY554774	Lactococcus phage AM9, complete genome	45975-46012	10	0.737
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	MH321490	Staphylococcus phage Quidividi, complete genome	32143-32180	10	0.737
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	NZ_CP041286	Escherichia coli strain 54 plasmid p54-tetX, complete sequence	41030-41067	10	0.737
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	NZ_CP047578	Escherichia coli strain 94EC plasmid p94EC-2, complete sequence	18497-18534	10	0.737
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	NZ_CP047572	Escherichia coli strain 2EC1 plasmid p2EC1-1, complete sequence	18497-18534	10	0.737
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	NZ_CP037909	Escherichia coli strain LHM10-1 plasmid pLHM10-1, complete sequence	7086-7123	10	0.737
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	NZ_CP041443	Escherichia coli strain YPE12 plasmid pYPE12-101k-tetX4, complete sequence	38545-38582	10	0.737
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	NZ_MK134376	Escherichia coli strain 47EC plasmid p47EC, complete sequence	2616-2653	10	0.737
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	MT219826	Escherichia coli strain RW8-1 plasmid pRW8-1_122k_tetX, complete sequence	68803-68840	10	0.737
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	MT219817	Escherichia coli strain RF148-2 plasmid pRF148-2_101k_tetX, complete sequence	94616-94653	10	0.737
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	MT219817	Escherichia coli strain RF148-2 plasmid pRF148-2_101k_tetX, complete sequence	99222-99259	10	0.737
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	MT219818	Escherichia coli strain RF148-1 plasmid pRF148-1_119k_tetX, complete sequence	68332-68369	10	0.737
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	MT219819	Escherichia coli strain RF52-1 plasmid pRF52-1_119k_tetX, complete sequence	48878-48915	10	0.737
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	NZ_CP045188	Escherichia coli strain NT1F31 plasmid pNT1F31-tetX4, complete sequence	83501-83538	10	0.737
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	NZ_CP045188	Escherichia coli strain NT1F31 plasmid pNT1F31-tetX4, complete sequence	92815-92852	10	0.737
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	NZ_CP045188	Escherichia coli strain NT1F31 plasmid pNT1F31-tetX4, complete sequence	102129-102166	10	0.737
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	NZ_CP038140	Escherichia coli strain G3X16-2 plasmid pG3X16-2-3, complete sequence	24686-24723	10	0.737
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	NZ_CP038140	Escherichia coli strain G3X16-2 plasmid pG3X16-2-3, complete sequence	29287-29324	10	0.737
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	NZ_CP038140	Escherichia coli strain G3X16-2 plasmid pG3X16-2-3, complete sequence	33882-33919	10	0.737
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	NZ_CP038140	Escherichia coli strain G3X16-2 plasmid pG3X16-2-3, complete sequence	38482-38519	10	0.737
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	NZ_CP047460	Escherichia coli strain ZF31 plasmid pZF31-tetX-119kb, complete sequence	1456-1493	10	0.737
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	NZ_CP047460	Escherichia coli strain ZF31 plasmid pZF31-tetX-119kb, complete sequence	6071-6108	10	0.737
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	NZ_CP047466	Escherichia coli strain ZF34 plasmid pZF34-tetX-114kb, complete sequence	61265-61302	10	0.737
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	NZ_CP047466	Escherichia coli strain ZF34 plasmid pZF34-tetX-114kb, complete sequence	73744-73781	10	0.737
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	NZ_CP050174	Escherichia coli strain STB20-1 plasmid pSTB20-1T, complete sequence	23317-23354	10	0.737
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	NZ_CP041453	Escherichia coli strain YPE3 plasmid pYPE3-92k-tetX4, complete sequence	23294-23331	10	0.737
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	NZ_CP041453	Escherichia coli strain YPE3 plasmid pYPE3-92k-tetX4, complete sequence	32608-32645	10	0.737
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	NZ_MN381965	Escherichia coli strain 16EC plasmid p16EC-9K, complete sequence	7980-8017	10	0.737
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	MT219816	Escherichia coli strain RF173-1 plasmid pRF173-1_87k_tetX, complete sequence	26026-26063	10	0.737
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	MT219820	Escherichia coli strain RF108-2 plasmid pRF108-2_97k_tetX, complete sequence	45453-45490	10	0.737
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	MT219823	Escherichia coli strain RF10-1 plasmid pRF10-1_119k_tetX, complete sequence	24686-24723	10	0.737
NZ_CP046327_8	8.14\|1705696\|37\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705696-1705732	37	MF288922	Bacillus phage Janet, complete genome	40501-40537	10	0.73
NZ_CP046327_8	8.14\|1705696\|37\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705696-1705732	37	MH538296	Bacillus phage Maceta, complete genome	36442-36478	10	0.73
NZ_CP046327_8	8.14\|1705696\|37\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705696-1705732	37	NC_024216	Bacillus phage CAM003, complete genome	40425-40461	10	0.73
NZ_CP046327_8	8.14\|1705696\|37\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705696-1705732	37	KJ489400	Bacillus phage Hoody T, complete genome	40245-40281	10	0.73
NZ_CP046327_8	8.14\|1705696\|37\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705696-1705732	37	MF288921	Bacillus phage OTooleKemple52, complete genome	39856-39892	10	0.73
NZ_CP046327_8	8.14\|1705696\|37\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705696-1705732	37	MH638310	Bacillus phage Kamfam, complete genome	39856-39892	10	0.73
NZ_CP046327_8	8.14\|1705696\|37\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705696-1705732	37	MK215646	Bacillus phage vB_BthM-Goe5, complete genome	38291-38327	10	0.73
NZ_CP046327_8	8.14\|1705696\|37\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705696-1705732	37	KU737346	Bacillus phage Vinny, complete genome	40763-40799	10	0.73
NZ_CP046327_8	8.14\|1705696\|37\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705696-1705732	37	NC_024207	Bacillus phage Evoli, complete genome	40158-40194	10	0.73
NZ_CP046327_8	8.14\|1705696\|37\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705696-1705732	37	MF498901	Bacillus phage Anthony, complete genome	40764-40800	10	0.73
NZ_CP046327_8	8.14\|1705696\|37\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705696-1705732	37	NC_018856	Bacillus phage Bastille, complete genome	14410-14446	10	0.73
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	MT774377	CrAssphage cr107_1, complete genome	300-337	11	0.711
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	MN694330	Marine virus AFVG_250M1134, complete genome	557-594	11	0.711
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	DQ163915	Bacteriophage PA11, complete genome	35858-35895	11	0.711
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	NC_007808	Pseudomonas phage PA11, complete genome	35858-35895	11	0.711
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	MG676466	Pseudomonas phage TC6, complete genome	6443-6480	11	0.711
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	MF788075	Pseudomonas phage IME180, complete genome	6484-6521	11	0.711
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	MN694526	Marine virus AFVG_250M936, complete genome	7637-7674	11	0.711
NZ_CP046327_8	8.2\|1704899\|37\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1704899-1704935	37	NZ_CP024773	Bacillus thuringiensis LM1212 plasmid pLM2, complete sequence	122227-122263	12	0.676
NZ_CP046327_8	8.2\|1704899\|37\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1704899-1704935	37	NZ_CP041075	Bacillus tropicus strain LM1212-W3 plasmid p2, complete sequence	49110-49146	12	0.676
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	NZ_CP017217	Borreliella burgdorferi strain B331 plasmid B331_lp38, complete sequence	36342-36379	13	0.658
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	MN807295	Acinetobacter phage vB_AbaP_APK116, complete genome	3563-3600	13	0.658
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	NZ_CP014853	Bacillus thuringiensis strain HD12 plasmid pHD120345, complete sequence	184081-184118	14	0.632
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	MH892354	Streptococcus phage SW3, complete genome	24328-24365	14	0.632
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	NC_010077	Staphylococcus aureus plasmid EDINA, complete sequence	13990-14027	14	0.632
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	NZ_LR214986	Mycoplasma cynos strain NCTC10142 plasmid 13	594956-594993	14	0.632
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	DQ163915	Bacteriophage PA11, complete genome	35870-35907	14	0.632
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	NC_007808	Pseudomonas phage PA11, complete genome	35870-35907	14	0.632
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	MG676466	Pseudomonas phage TC6, complete genome	6431-6468	14	0.632
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	MF788075	Pseudomonas phage IME180, complete genome	6472-6509	14	0.632
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	KP027447	Staphylococcus phage phiIPLA-C1C, complete genome	138451-138488	15	0.605
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	NC_002072	Streptococcus phage DT1, complete genome	30121-30158	15	0.605
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	AF085222	Streptococcus thermophilus bacteriophage DT1, complete genome	30121-30158	15	0.605
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	MH937502	Streptococcus phage CHPC1083, complete genome	32637-32674	15	0.605
NZ_CP046327_8	8.8\|1705296\|38\|NZ_CP046327\|PILER-CR,CRISPRCasFinder,CRT	1705296-1705333	38	MH937478	Streptococcus phage CHPC951, complete genome	32612-32649	15	0.605

1. spacer 2.6|801998|38|NZ_CP046327|PILER-CR,CRISPRCasFinder matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 0, identity: 1.0

aataaaaaaggtatagttttcttcttagttactgccat	CRISPR spacer
aataaaaaaggtatagttttcttcttagttactgccat	Protospacer
**************************************

2. spacer 3.5|1151918|37|NZ_CP046327|CRISPRCasFinder,CRT,PILER-CR matches to NC_048665 (Clostridium phage phiCDHM14, complete genome) position: , mismatch: 0, identity: 1.0

gattttttcatgcggaggaaaattgatgtggggacat	CRISPR spacer
gattttttcatgcggaggaaaattgatgtggggacat	Protospacer
*************************************

3. spacer 3.5|1151918|37|NZ_CP046327|CRISPRCasFinder,CRT,PILER-CR matches to JX145342 (Clostridium phage phiMMP04, complete genome) position: , mismatch: 0, identity: 1.0

gattttttcatgcggaggaaaattgatgtggggacat	CRISPR spacer
gattttttcatgcggaggaaaattgatgtggggacat	Protospacer
*************************************

4. spacer 3.5|1151918|37|NZ_CP046327|CRISPRCasFinder,CRT,PILER-CR matches to NC_028838 (Clostridium phage phiCD506, complete genome) position: , mismatch: 0, identity: 1.0

gattttttcatgcggaggaaaattgatgtggggacat	CRISPR spacer
gattttttcatgcggaggaaaattgatgtggggacat	Protospacer
*************************************

5. spacer 3.5|1151918|37|NZ_CP046327|CRISPRCasFinder,CRT,PILER-CR matches to HG796225 (Clostridium phage phiCDHM13 complete genome) position: , mismatch: 0, identity: 1.0

gattttttcatgcggaggaaaattgatgtggggacat	CRISPR spacer
gattttttcatgcggaggaaaattgatgtggggacat	Protospacer
*************************************

6. spacer 3.5|1151918|37|NZ_CP046327|CRISPRCasFinder,CRT,PILER-CR matches to LN681538 (Clostridium phage phiCD481-1, complete genome) position: , mismatch: 0, identity: 1.0

gattttttcatgcggaggaaaattgatgtggggacat	CRISPR spacer
gattttttcatgcggaggaaaattgatgtggggacat	Protospacer
*************************************

7. spacer 3.12|1152380|38|NZ_CP046327|CRISPRCasFinder,CRT,PILER-CR matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 0, identity: 1.0

tcttcttatcttccagttgcaaaatctatgcttgacct	CRISPR spacer
tcttcttatcttccagttgcaaaatctatgcttgacct	Protospacer
**************************************

8. spacer 7.5|1495953|37|NZ_CP046327|CRISPRCasFinder,CRT,PILER-CR matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 0, identity: 1.0

cctctgtgactccatattttttcataatatataattc	CRISPR spacer
cctctgtgactccatattttttcataatatataattc	Protospacer
*************************************

9. spacer 8.1|1704833|37|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to LN681539 (Clostridium phage phiCD505, complete genome) position: , mismatch: 0, identity: 1.0

taaatatagcttgtaactcctttgatgcacttaaaag	CRISPR spacer
taaatatagcttgtaactcctttgatgcacttaaaag	Protospacer
*************************************

10. spacer 8.1|1704833|37|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to NC_011398 (Clostridium phage phiCD27, complete genome) position: , mismatch: 0, identity: 1.0

taaatatagcttgtaactcctttgatgcacttaaaag	CRISPR spacer
taaatatagcttgtaactcctttgatgcacttaaaag	Protospacer
*************************************

11. spacer 8.1|1704833|37|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to NC_048642 (Clostridium phage CDKM9, complete genome) position: , mismatch: 0, identity: 1.0

taaatatagcttgtaactcctttgatgcacttaaaag	CRISPR spacer
taaatatagcttgtaactcctttgatgcacttaaaag	Protospacer
*************************************

12. spacer 8.7|1705230|37|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 0, identity: 1.0

acgaggttatagttaattttgtcgtgggagtttataa	CRISPR spacer
acgaggttatagttaattttgtcgtgggagtttataa	Protospacer
*************************************

13. spacer 8.14|1705696|37|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to MK473382 (Clostridium phage JD032, complete genome) position: , mismatch: 0, identity: 1.0

cagcggatgaattatttatgttaattggagatggaga	CRISPR spacer
cagcggatgaattatttatgttaattggagatggaga	Protospacer
*************************************

14. spacer 10.1|2861390|28|NZ_CP046327|CRISPRCasFinder matches to NZ_CP033215 (Clostridioides difficile strain 12038 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gttgattcatattgctttaacttattac	CRISPR spacer
gttgattcatattgctttaacttattac	Protospacer
****************************

15. spacer 13.1|3934453|39|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020425 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

aagcaactatagtagaagcaaaagcgacaacaactaaag	CRISPR spacer
aagcaactatagtagaagcaaaagcgacaacaactaaag	Protospacer
***************************************

16. spacer 13.1|3934453|39|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to FN668942 (Clostridium difficile BI1 plasmid pCDBI1, complete sequence) position: , mismatch: 0, identity: 1.0

aagcaactatagtagaagcaaaagcgacaacaactaaag	CRISPR spacer
aagcaactatagtagaagcaaaagcgacaacaactaaag	Protospacer
***************************************

17. spacer 13.1|3934453|39|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011969 (Clostridioides difficile ATCC 9689 = DSM 1296 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

aagcaactatagtagaagcaaaagcgacaacaactaaag	CRISPR spacer
aagcaactatagtagaagcaaaagcgacaacaactaaag	Protospacer
***************************************

18. spacer 13.2|3934521|36|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020425 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ttggttaacttaagtgctatgaaaggaattaatgaa	CRISPR spacer
ttggttaacttaagtgctatgaaaggaattaatgaa	Protospacer
************************************

19. spacer 13.2|3934521|36|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to FN668942 (Clostridium difficile BI1 plasmid pCDBI1, complete sequence) position: , mismatch: 0, identity: 1.0

ttggttaacttaagtgctatgaaaggaattaatgaa	CRISPR spacer
ttggttaacttaagtgctatgaaaggaattaatgaa	Protospacer
************************************

20. spacer 13.2|3934521|36|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011969 (Clostridioides difficile ATCC 9689 = DSM 1296 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

ttggttaacttaagtgctatgaaaggaattaatgaa	CRISPR spacer
ttggttaacttaagtgctatgaaaggaattaatgaa	Protospacer
************************************

21. spacer 13.10|3935053|37|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to JX145341 (Clostridium phage phiMMP02, complete genome) position: , mismatch: 0, identity: 1.0

actaaacctttttgtttacttttatttctcattttac	CRISPR spacer
actaaacctttttgtttacttttatttctcattttac	Protospacer
*************************************

22. spacer 13.17|3935514|37|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020426 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

cattgtatactaagcttgatatagtgcaaaatgaaac	CRISPR spacer
cattgtatactaagcttgatatagtgcaaaatgaaac	Protospacer
*************************************

23. spacer 13.17|3935514|37|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to CP011970 (Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence) position: , mismatch: 0, identity: 1.0

cattgtatactaagcttgatatagtgcaaaatgaaac	CRISPR spacer
cattgtatactaagcttgatatagtgcaaaatgaaac	Protospacer
*************************************

24. spacer 13.17|3935514|37|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to LN681537 (Clostridium phage phiCD211, complete genome) position: , mismatch: 0, identity: 1.0

cattgtatactaagcttgatatagtgcaaaatgaaac	CRISPR spacer
cattgtatactaagcttgatatagtgcaaaatgaaac	Protospacer
*************************************

25. spacer 13.18|3935580|36|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to MF547662 (Clostridioides phage LIBA6276, complete genome) position: , mismatch: 0, identity: 1.0

actaattgggttaaacaaatggatataactaaatta	CRISPR spacer
actaattgggttaaacaaatggatataactaaatta	Protospacer
************************************

26. spacer 13.18|3935580|36|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to MF547663 (Clostridioides phage LIBA2945, complete genome) position: , mismatch: 0, identity: 1.0

actaattgggttaaacaaatggatataactaaatta	CRISPR spacer
actaattgggttaaacaaatggatataactaaatta	Protospacer
************************************

27. spacer 2.5|801932|37|NZ_CP046327|PILER-CR,CRISPRCasFinder matches to LN681539 (Clostridium phage phiCD505, complete genome) position: , mismatch: 1, identity: 0.973

ttaaatctagcatcagtcattagtataaaatttcctc	CRISPR spacer
ttaaatctagcatcagtcattattataaaatttcctc	Protospacer
********************** **************

28. spacer 2.5|801932|37|NZ_CP046327|PILER-CR,CRISPRCasFinder matches to JX145341 (Clostridium phage phiMMP02, complete genome) position: , mismatch: 1, identity: 0.973

ttaaatctagcatcagtcattagtataaaatttcctc	CRISPR spacer
ttaaatctagcatcagtcattattataaaatttcctc	Protospacer
********************** **************

29. spacer 2.5|801932|37|NZ_CP046327|PILER-CR,CRISPRCasFinder matches to NC_048642 (Clostridium phage CDKM9, complete genome) position: , mismatch: 1, identity: 0.973

ttaaatctagcatcagtcattagtataaaatttcctc	CRISPR spacer
ttaaatctagcatcagtcattattataaaatttcctc	Protospacer
********************** **************

30. spacer 2.5|801932|37|NZ_CP046327|PILER-CR,CRISPRCasFinder matches to KX228400 (Clostridium phage CDKM15, complete genome) position: , mismatch: 1, identity: 0.973

ttaaatctagcatcagtcattagtataaaatttcctc	CRISPR spacer
ttaaatctagcatcagtcattattataaaatttcctc	Protospacer
********************** **************

31. spacer 2.15|801997|39|NZ_CP046327|CRT matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 1, identity: 0.974

gaataaaaaaggtatagttttcttcttagttactgccat	CRISPR spacer
aaataaaaaaggtatagttttcttcttagttactgccat	Protospacer
.**************************************

32. spacer 3.6|1151984|36|NZ_CP046327|CRISPRCasFinder,CRT,PILER-CR matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 1, identity: 0.972

agataatctaggcacacatacaatgcgcaaaacttt	CRISPR spacer
agataatctaggcacacatacaatgcgtaaaacttt	Protospacer
***************************.********

33. spacer 7.5|1495953|37|NZ_CP046327|CRISPRCasFinder,CRT,PILER-CR matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 1, identity: 0.973

cctctgtgactccatattttttcataatatataattc	CRISPR spacer
cctctgtgactccatattttttcataatatacaattc	Protospacer
*******************************.*****

34. spacer 7.5|1495953|37|NZ_CP046327|CRISPRCasFinder,CRT,PILER-CR matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 1, identity: 0.973

cctctgtgactccatattttttcataatatataattc	CRISPR spacer
cctctgtgactccatattttttcataatatacaattc	Protospacer
*******************************.*****

35. spacer 7.5|1495953|37|NZ_CP046327|CRISPRCasFinder,CRT,PILER-CR matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 1, identity: 0.973

cctctgtgactccatattttttcataatatataattc	CRISPR spacer
cctctgtgactccatattttttcataatatacaattc	Protospacer
*******************************.*****

36. spacer 7.5|1495953|37|NZ_CP046327|CRISPRCasFinder,CRT,PILER-CR matches to LN680009 (Clostridium phage phiCDHS1 gp03 gene for putative portal capsid protein) position: , mismatch: 1, identity: 0.973

cctctgtgactccatattttttcataatatataattc	CRISPR spacer
cctctgtgactccatattttttcataatatacaattc	Protospacer
*******************************.*****

37. spacer 7.7|1496086|38|NZ_CP046327|CRISPRCasFinder,CRT,PILER-CR matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 1, identity: 0.974

ttttctacttttttaatcatttaatcacctgcttaaaa	CRISPR spacer
ttttctacttttttaatcatttaatcacctacttaaaa	Protospacer
******************************.*******

38. spacer 7.7|1496086|38|NZ_CP046327|CRISPRCasFinder,CRT,PILER-CR matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 1, identity: 0.974

ttttctacttttttaatcatttaatcacctgcttaaaa	CRISPR spacer
ttttctacttttttaatcatttaatcacctacttaaaa	Protospacer
******************************.*******

39. spacer 7.7|1496086|38|NZ_CP046327|CRISPRCasFinder,CRT,PILER-CR matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 1, identity: 0.974

ttttctacttttttaatcatttaatcacctgcttaaaa	CRISPR spacer
ttttctacttttttaatcatttaatcacctacttaaaa	Protospacer
******************************.*******

40. spacer 8.1|1704833|37|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to LN681542 (Clostridium phage phiMMP03, complete genome) position: , mismatch: 1, identity: 0.973

taaatatagcttgtaactcctttgatgcacttaaaag	CRISPR spacer
taaatatagcctgtaactcctttgatgcacttaaaag	Protospacer
**********.**************************

41. spacer 8.1|1704833|37|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to NC_009231 (Clostridium phage phiC2, complete genome) position: , mismatch: 1, identity: 0.973

taaatatagcttgtaactcctttgatgcacttaaaag	CRISPR spacer
taaatatagcctgtaactcctttgatgcacttaaaag	Protospacer
**********.**************************

42. spacer 8.10|1705431|37|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 1, identity: 0.973

ctgtaccatcagagacagtcattaaaagatttataaa	CRISPR spacer
ctgttccatcagagacagtcattaaaagatttataaa	Protospacer
**** ********************************

43. spacer 9.1|2283810|37|NZ_CP046327|CRISPRCasFinder matches to NZ_MG973074 (Clostridioides difficile strain HSJD-312 plasmid pHSJD-312, complete sequence) position: , mismatch: 1, identity: 0.973

gtagaacgtcttatcttctatatttagataaccatat	CRISPR spacer
gtagaacatcttatcttctatatttagataaccatat	Protospacer
*******.*****************************

44. spacer 11.21|3571222|20|NZ_CP046327|CRT matches to NZ_CP012101 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-2, complete sequence) position: , mismatch: 1, identity: 0.95

tccaacaggaccaacaggag	CRISPR spacer
tccaacaggaccaacaggac	Protospacer
*******************

45. spacer 11.21|3571222|20|NZ_CP046327|CRT matches to CP013001 (Bacillus thuringiensis strain XL6 plasmid, complete sequence) position: , mismatch: 1, identity: 0.95

tccaacaggaccaacaggag	CRISPR spacer
accaacaggaccaacaggag	Protospacer
 *******************

46. spacer 11.21|3571222|20|NZ_CP046327|CRT matches to CP013001 (Bacillus thuringiensis strain XL6 plasmid, complete sequence) position: , mismatch: 1, identity: 0.95

tccaacaggaccaacaggag	CRISPR spacer
tccaacaggaccaacaggac	Protospacer
*******************

47. spacer 11.21|3571222|20|NZ_CP046327|CRT matches to CP013001 (Bacillus thuringiensis strain XL6 plasmid, complete sequence) position: , mismatch: 1, identity: 0.95

tccaacaggaccaacaggag	CRISPR spacer
tccaacaggaccaacaggac	Protospacer
*******************

48. spacer 11.21|3571222|20|NZ_CP046327|CRT matches to MN693263 (Marine virus AFVG_25M296, complete genome) position: , mismatch: 1, identity: 0.95

tccaacaggaccaacaggag	CRISPR spacer
tccaacaggaccaacaggac	Protospacer
*******************

49. spacer 11.21|3571222|20|NZ_CP046327|CRT matches to MN693968 (Marine virus AFVG_250M909, complete genome) position: , mismatch: 1, identity: 0.95

tccaacaggaccaacaggag	CRISPR spacer
tccaacaggaccaacaggac	Protospacer
*******************

50. spacer 12.8|3688907|36|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020426 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.972

tctgtagctatatgtggaagtaattttagtagagag	CRISPR spacer
tctgtagctatatgtgggagtaattttagtagagag	Protospacer
*****************.******************

51. spacer 12.8|3688907|36|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029155 (Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.972

tctgtagctatatgtggaagtaattttagtagagag	CRISPR spacer
tctgtagctatatgtgggagtaattttagtagagag	Protospacer
*****************.******************

52. spacer 12.8|3688907|36|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to CP011970 (Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence) position: , mismatch: 1, identity: 0.972

tctgtagctatatgtggaagtaattttagtagagag	CRISPR spacer
tctgtagctatatgtgggagtaattttagtagagag	Protospacer
*****************.******************

53. spacer 12.8|3688907|36|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to LN681537 (Clostridium phage phiCD211, complete genome) position: , mismatch: 1, identity: 0.972

tctgtagctatatgtggaagtaattttagtagagag	CRISPR spacer
tctgtagctatatgtgggagtaattttagtagagag	Protospacer
*****************.******************

54. spacer 13.16|3935448|37|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020426 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.973

ttgtttatacctttaatctttaaaattaaatataaaa	CRISPR spacer
atgtttatacctttaatctttaaaattaaatataaaa	Protospacer
 ************************************

55. spacer 13.16|3935448|37|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to CP011970 (Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence) position: , mismatch: 1, identity: 0.973

ttgtttatacctttaatctttaaaattaaatataaaa	CRISPR spacer
atgtttatacctttaatctttaaaattaaatataaaa	Protospacer
 ************************************

56. spacer 13.16|3935448|37|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to LN681537 (Clostridium phage phiCD211, complete genome) position: , mismatch: 1, identity: 0.973

ttgtttatacctttaatctttaaaattaaatataaaa	CRISPR spacer
atgtttatacctttaatctttaaaattaaatataaaa	Protospacer
 ************************************

57. spacer 2.5|801932|37|NZ_CP046327|PILER-CR,CRISPRCasFinder matches to NC_011398 (Clostridium phage phiCD27, complete genome) position: , mismatch: 2, identity: 0.946

ttaaatctagcatcagtcattagtataaaatttcctc	CRISPR spacer
ttaaatctagcatcagtcatttgtataaaacttcctc	Protospacer
********************* ********.******

58. spacer 2.6|801998|38|NZ_CP046327|PILER-CR,CRISPRCasFinder matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 2, identity: 0.947

aataaaaaaggtatagttttcttcttagttactgccat	CRISPR spacer
aatcgaaaaggtatagttttcttcttagttactgccat	Protospacer
*** .*********************************

59. spacer 2.6|801998|38|NZ_CP046327|PILER-CR,CRISPRCasFinder matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 2, identity: 0.947

aataaaaaaggtatagttttcttcttagttactgccat	CRISPR spacer
aatcgaaaaggtatagttttcttcttagttactgccat	Protospacer
*** .*********************************

60. spacer 2.6|801998|38|NZ_CP046327|PILER-CR,CRISPRCasFinder matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 2, identity: 0.947

aataaaaaaggtatagttttcttcttagttactgccat	CRISPR spacer
aattgaaaaggtatagttttcttcttagttactgccat	Protospacer
*** .*********************************

61. spacer 2.6|801998|38|NZ_CP046327|PILER-CR,CRISPRCasFinder matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 2, identity: 0.947

aataaaaaaggtatagttttcttcttagttactgccat	CRISPR spacer
aatttaaaaggtatagttttcttcttagttactgccat	Protospacer
***  *********************************

62. spacer 2.14|801931|38|NZ_CP046327|CRT matches to LN681539 (Clostridium phage phiCD505, complete genome) position: , mismatch: 2, identity: 0.947

gttaaatctagcatcagtcattagtataaaatttcctc	CRISPR spacer
attaaatctagcatcagtcattattataaaatttcctc	Protospacer
.********************** **************

63. spacer 2.14|801931|38|NZ_CP046327|CRT matches to JX145341 (Clostridium phage phiMMP02, complete genome) position: , mismatch: 2, identity: 0.947

gttaaatctagcatcagtcattagtataaaatttcctc	CRISPR spacer
attaaatctagcatcagtcattattataaaatttcctc	Protospacer
.********************** **************

64. spacer 2.14|801931|38|NZ_CP046327|CRT matches to NC_048642 (Clostridium phage CDKM9, complete genome) position: , mismatch: 2, identity: 0.947

gttaaatctagcatcagtcattagtataaaatttcctc	CRISPR spacer
attaaatctagcatcagtcattattataaaatttcctc	Protospacer
.********************** **************

65. spacer 2.14|801931|38|NZ_CP046327|CRT matches to KX228400 (Clostridium phage CDKM15, complete genome) position: , mismatch: 2, identity: 0.947

gttaaatctagcatcagtcattagtataaaatttcctc	CRISPR spacer
attaaatctagcatcagtcattattataaaatttcctc	Protospacer
.********************** **************

66. spacer 3.5|1151918|37|NZ_CP046327|CRISPRCasFinder,CRT,PILER-CR matches to NC_008226 (Clostridioides difficile 630 plasmid pCD630, complete sequence) position: , mismatch: 2, identity: 0.946

gattttttcatgcggaggaaaattgatgtggggacat	CRISPR spacer
cattttttcattcggaggaaaattgatgtggggacat	Protospacer
 ********** *************************

67. spacer 3.5|1151918|37|NZ_CP046327|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016319 (Clostridioides difficile strain 630 delta erm plasmid pCD630, complete sequence) position: , mismatch: 2, identity: 0.946

gattttttcatgcggaggaaaattgatgtggggacat	CRISPR spacer
cattttttcattcggaggaaaattgatgtggggacat	Protospacer
 ********** *************************

68. spacer 7.9|1496220|36|NZ_CP046327|CRISPRCasFinder,CRT,PILER-CR matches to NC_028838 (Clostridium phage phiCD506, complete genome) position: , mismatch: 2, identity: 0.944

tattatgtagtcatatatttcaaactctaatttcgt	CRISPR spacer
tattatgtagtcatatatttcaaattctagtttcgt	Protospacer
************************.****.******

69. spacer 8.10|1705431|37|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 2, identity: 0.946

ctgtaccatcagagacagtcattaaaagatttataaa	CRISPR spacer
ctgttccatcagaaacagtcattaaaagatttataaa	Protospacer
**** ********.***********************

70. spacer 8.12|1705565|35|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to NC_011398 (Clostridium phage phiCD27, complete genome) position: , mismatch: 2, identity: 0.943

catgaaaaaatgggtaattcaaactcttttatttt	CRISPR spacer
catgaaaaaatgggtaattcaaactcctttatctt	Protospacer
**************************.*****.**

71. spacer 12.5|3688708|36|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 2, identity: 0.944

tgtacatttgacatagaagcttcaaaatccatccca	CRISPR spacer
tgtacatttgacatagatgcttcaaaatccattcca	Protospacer
***************** **************.***

72. spacer 13.6|3934784|36|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 2, identity: 0.944

tccatttgtctaatgcttctaactctttttttatac	CRISPR spacer
tccatctatctaatgcttctaactctttttttatac	Protospacer
*****.*.****************************

73. spacer 13.16|3935448|37|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029155 (Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.946

ttgtttatacctttaatctttaaaattaaatataaaa	CRISPR spacer
atatttatacctttaatctttaaaattaaatataaaa	Protospacer
 *.**********************************

74. spacer 13.20|3935711|37|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to MF547662 (Clostridioides phage LIBA6276, complete genome) position: , mismatch: 2, identity: 0.946

tgtaaaaatattgcttagcatattgatatcactaact	CRISPR spacer
tgtaaaaatattgcttatcatattgatatcactagct	Protospacer
***************** ****************.**

75. spacer 13.20|3935711|37|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to MF547663 (Clostridioides phage LIBA2945, complete genome) position: , mismatch: 2, identity: 0.946

tgtaaaaatattgcttagcatattgatatcactaact	CRISPR spacer
tgtaaaaatattgcttatcatattgatatcactagct	Protospacer
***************** ****************.**

76. spacer 2.14|801931|38|NZ_CP046327|CRT matches to NC_011398 (Clostridium phage phiCD27, complete genome) position: , mismatch: 3, identity: 0.921

gttaaatctagcatcagtcattagtataaaatttcctc	CRISPR spacer
attaaatctagcatcagtcatttgtataaaacttcctc	Protospacer
.********************* ********.******

77. spacer 2.15|801997|39|NZ_CP046327|CRT matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 3, identity: 0.923

gaataaaaaaggtatagttttcttcttagttactgccat	CRISPR spacer
aaatcgaaaaggtatagttttcttcttagttactgccat	Protospacer
.*** .*********************************

78. spacer 2.15|801997|39|NZ_CP046327|CRT matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 3, identity: 0.923

gaataaaaaaggtatagttttcttcttagttactgccat	CRISPR spacer
aaattgaaaaggtatagttttcttcttagttactgccat	Protospacer
.*** .*********************************

79. spacer 2.15|801997|39|NZ_CP046327|CRT matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 3, identity: 0.923

gaataaaaaaggtatagttttcttcttagttactgccat	CRISPR spacer
aaatttaaaaggtatagttttcttcttagttactgccat	Protospacer
.***  *********************************

80. spacer 2.15|801997|39|NZ_CP046327|CRT matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 3, identity: 0.923

gaataaaaaaggtatagttttcttcttagttactgccat	CRISPR spacer
aaatcgaaaaggtatagttttcttcttagttactgccat	Protospacer
.*** .*********************************

81. spacer 3.5|1151918|37|NZ_CP046327|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MG266000 (Clostridioides difficile strain 7032985 plasmid pCD-ISS1, complete sequence) position: , mismatch: 3, identity: 0.919

gattttttcatgcggaggaaaattgatgtggggacat	CRISPR spacer
cattttttcattcggaggaaaattgatgtgggggcat	Protospacer
 ********** *********************.***

82. spacer 5.5|1292303|36|NZ_CP046327|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029155 (Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.917

agaaagattaaaaaatagaatgatacttcttacaac	CRISPR spacer
agaaagattaaaaaatagaatgatacttcctccaat	Protospacer
*****************************.* ***.

83. spacer 7.2|1495758|37|NZ_CP046327|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020425 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.919

caaaagttggagaaatagaagtgccattcacattcga	CRISPR spacer
cgaaagttggagaaatagaagtaccattcacatttga	Protospacer
*.********************.***********.**

84. spacer 7.2|1495758|37|NZ_CP046327|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011969 (Clostridioides difficile ATCC 9689 = DSM 1296 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.919

caaaagttggagaaatagaagtgccattcacattcga	CRISPR spacer
cgaaagttggagaaatagaagtaccattcacatttga	Protospacer
*.********************.***********.**

85. spacer 7.2|1495758|37|NZ_CP046327|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029156 (Clostridioides difficile strain CD161 plasmid unnamed2, complete sequence) position: , mismatch: 3, identity: 0.919

caaaagttggagaaatagaagtgccattcacattcga	CRISPR spacer
cgaaagttggagaaatagaagtaccattcacatttga	Protospacer
*.********************.***********.**

86. spacer 7.2|1495758|37|NZ_CP046327|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029153 (Clostridioides difficile strain CDT4 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.919

caaaagttggagaaatagaagtgccattcacattcga	CRISPR spacer
cgaaagttggagaaatagaagtaccattcacatttga	Protospacer
*.********************.***********.**

87. spacer 8.5|1705098|37|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 3, identity: 0.919

catcccattcagcaacaacagtcgctaaatcttctgc	CRISPR spacer
catcccattcagcaacaacagtcgctaaattttgcgc	Protospacer
******************************.** .**

88. spacer 11.3|3570304|29|NZ_CP046327|CRT matches to CP013001 (Bacillus thuringiensis strain XL6 plasmid, complete sequence) position: , mismatch: 3, identity: 0.897

aacaacaggttctacaggaccaacaggaa	CRISPR spacer
accaacaggttcaacaggaccaacaggac	Protospacer
* ********** ***************

89. spacer 11.3|3570304|29|NZ_CP046327|CRT matches to CP013001 (Bacillus thuringiensis strain XL6 plasmid, complete sequence) position: , mismatch: 3, identity: 0.897

aacaacaggttctacaggaccaacaggaa	CRISPR spacer
accaacaggttcaacaggaccaacaggac	Protospacer
* ********** ***************

90. spacer 12.7|3688839|39|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to JX145342 (Clostridium phage phiMMP04, complete genome) position: , mismatch: 3, identity: 0.923

agaagtacacttacaagtaagataaaagacccaggtaca	CRISPR spacer
cgaagcacacttacaagtaagataaaagaccctggtaca	Protospacer
 ****.************************** ******

91. spacer 2.19|802262|31|NZ_CP046327|CRT matches to NZ_CP014419 (Staphylococcus aureus strain USA300-SUR15 plasmid pUSA08-1-SUR15, complete sequence) position: , mismatch: 4, identity: 0.871

tgttttttcttattaaataaagattgagtca	CRISPR spacer
agttttttgttattaaataaagattgattta	Protospacer
 ******* ****************** *.*

92. spacer 3.5|1151918|37|NZ_CP046327|CRISPRCasFinder,CRT,PILER-CR matches to MK473382 (Clostridium phage JD032, complete genome) position: , mismatch: 4, identity: 0.892

gattttttcatgcggaggaaaattgatgtggggacat	CRISPR spacer
atttttttcgtgcggaggaaaattgaggtggggacat	Protospacer
. *******.**************** **********

93. spacer 7.9|1496220|36|NZ_CP046327|CRISPRCasFinder,CRT,PILER-CR matches to JX145342 (Clostridium phage phiMMP04, complete genome) position: , mismatch: 4, identity: 0.889

tattatgtagtcatatatttcaaactctaatttcgt	CRISPR spacer
tattatgtagtcatagatttcaaattctaatttact	Protospacer
*************** ********.********  *

94. spacer 11.3|3570304|29|NZ_CP046327|CRT matches to CP013001 (Bacillus thuringiensis strain XL6 plasmid, complete sequence) position: , mismatch: 4, identity: 0.862

aacaacaggttctacaggaccaacaggaa	CRISPR spacer
ttcaacaggttcaacaggaccaacaggac	Protospacer
  ********** ***************

95. spacer 11.3|3570304|29|NZ_CP046327|CRT matches to CP013001 (Bacillus thuringiensis strain XL6 plasmid, complete sequence) position: , mismatch: 4, identity: 0.862

aacaacaggttctacaggaccaacaggaa	CRISPR spacer
ttcaacaggttcaacaggaccaacaggac	Protospacer
  ********** ***************

96. spacer 11.3|3570304|29|NZ_CP046327|CRT matches to CP013001 (Bacillus thuringiensis strain XL6 plasmid, complete sequence) position: , mismatch: 4, identity: 0.862

aacaacaggttctacaggaccaacaggaa	CRISPR spacer
gacagcaggtcctacaggaccaacaggac	Protospacer
.***.*****.*****************

97. spacer 11.3|3570304|29|NZ_CP046327|CRT matches to CP013001 (Bacillus thuringiensis strain XL6 plasmid, complete sequence) position: , mismatch: 4, identity: 0.862

aacaacaggttctacaggaccaacaggaa	CRISPR spacer
accaacaggttcaacaggaccaacaggtt	Protospacer
* ********** **************

98. spacer 13.12|3935185|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to JX145341 (Clostridium phage phiMMP02, complete genome) position: , mismatch: 4, identity: 0.895

agtaattccatgcaatcttttatattgctttttaacct	CRISPR spacer
agtaattccatacagtcttttatattgctttttaattt	Protospacer
***********.**.********************..*

99. spacer 11.3|3570304|29|NZ_CP046327|CRT matches to NZ_CP012105 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-6, complete sequence) position: , mismatch: 5, identity: 0.828

aacaacaggttctacaggaccaacaggaa	CRISPR spacer
cccaacaggttcaacaggtccaacaggac	Protospacer
  ********** ***** *********

100. spacer 11.3|3570304|29|NZ_CP046327|CRT matches to MN693968 (Marine virus AFVG_250M909, complete genome) position: , mismatch: 5, identity: 0.828

aacaacaggttctacaggaccaacaggaa	CRISPR spacer
agcaacaggttctacaggacctactggtc	Protospacer
*.******************* ** **

101. spacer 8.14|1705696|37|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to NC_048665 (Clostridium phage phiCDHM14, complete genome) position: , mismatch: 6, identity: 0.838

cagcggatgaattatttatgttaattggagatggaga	CRISPR spacer
cagcagatgaattatttatgttaattgcagacaatga	Protospacer
****.********************** ***... **

102. spacer 8.14|1705696|37|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to NC_028838 (Clostridium phage phiCD506, complete genome) position: , mismatch: 6, identity: 0.838

cagcggatgaattatttatgttaattggagatggaga	CRISPR spacer
cagcagatgaattatttatgttaattgcagacaatga	Protospacer
****.********************** ***... **

103. spacer 8.14|1705696|37|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to HG796225 (Clostridium phage phiCDHM13 complete genome) position: , mismatch: 6, identity: 0.838

cagcggatgaattatttatgttaattggagatggaga	CRISPR spacer
cagcagatgaattatttatgttaattgcagacaatga	Protospacer
****.********************** ***... **

104. spacer 8.14|1705696|37|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to LN681538 (Clostridium phage phiCD481-1, complete genome) position: , mismatch: 6, identity: 0.838

cagcggatgaattatttatgttaattggagatggaga	CRISPR spacer
cagcagatgaattatttatgttaattgcagacaatga	Protospacer
****.********************** ***... **

105. spacer 8.14|1705696|37|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to HG798901 (Clostridium phage phiCDHM11 complete genome) position: , mismatch: 6, identity: 0.838

cagcggatgaattatttatgttaattggagatggaga	CRISPR spacer
cagcagatgaattatttatgttaattgcagacaatga	Protospacer
****.********************** ***... **

106. spacer 10.1|2861390|28|NZ_CP046327|CRISPRCasFinder matches to KY971610 (Pseudomonas phage PspYZU05, complete genome) position: , mismatch: 6, identity: 0.786

gttgattcatattgctttaacttattac	CRISPR spacer
gatgattcgtattgctgtaacttatcgt	Protospacer
* ******.******* ********...

107. spacer 11.3|3570304|29|NZ_CP046327|CRT matches to CP013001 (Bacillus thuringiensis strain XL6 plasmid, complete sequence) position: , mismatch: 6, identity: 0.793

aacaacaggttctacaggaccaacaggaa	CRISPR spacer
tcctacagggtctacaggaccaacagggc	Protospacer
  * ***** *****************.

108. spacer 11.3|3570304|29|NZ_CP046327|CRT matches to NZ_CP012105 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-6, complete sequence) position: , mismatch: 6, identity: 0.793

aacaacaggttctacaggaccaacaggaa	CRISPR spacer
ttcaacaggtccaacaggaccaacagggc	Protospacer
  ********.* **************.

109. spacer 11.3|3570304|29|NZ_CP046327|CRT matches to MN694558 (Marine virus AFVG_250M9, complete genome) position: , mismatch: 6, identity: 0.793

aacaacaggttctacaggaccaacaggaa	CRISPR spacer
gccaacaggttctacagggccgacaggtt	Protospacer
. ****************.**.*****

110. spacer 11.3|3570304|29|NZ_CP046327|CRT matches to MN693383 (Marine virus AFVG_25M295, complete genome) position: , mismatch: 6, identity: 0.793

aacaacaggttctacaggaccaacaggaa	CRISPR spacer
tgcaacaggtgttacaggaccaacaggtt	Protospacer
 .******** .***************

111. spacer 11.3|3570304|29|NZ_CP046327|CRT matches to MN693263 (Marine virus AFVG_25M296, complete genome) position: , mismatch: 6, identity: 0.793

aacaacaggttctacaggaccaacaggaa	CRISPR spacer
tttatcaggttctactggaccaacaggac	Protospacer
  .* ********** ************

112. spacer 11.3|3570304|29|NZ_CP046327|CRT matches to MN694393 (Marine virus AFVG_250M420, complete genome) position: , mismatch: 6, identity: 0.793

aacaacaggttctacaggaccaacaggaa	CRISPR spacer
ttcaacaggttctacaggatcaactggct	Protospacer
  *****************.**** **

113. spacer 11.3|3570304|29|NZ_CP046327|CRT matches to MH629685 (Synechococcus virus S-PRM1, complete genome) position: , mismatch: 6, identity: 0.793

aacaacaggttctacaggaccaacaggaa	CRISPR spacer
cgcaacaggtcctacaggacccacaggtc	Protospacer
 .********.********** *****

114. spacer 11.3|3570304|29|NZ_CP046327|CRT matches to MN694640 (Marine virus AFVG_250M10, complete genome) position: , mismatch: 6, identity: 0.793

aacaacaggttctacaggaccaacaggaa	CRISPR spacer
gccaacaggttctacagggccgacaggtt	Protospacer
. ****************.**.*****

115. spacer 11.3|3570304|29|NZ_CP046327|CRT matches to NZ_CP017076 (Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence) position: , mismatch: 6, identity: 0.793

aacaacaggttctacaggaccaacaggaa	CRISPR spacer
accaacacgttctactggaccaacatcca	Protospacer
* ***** ******* *********   *

116. spacer 2.19|802262|31|NZ_CP046327|CRT matches to NZ_CP007752 (Campylobacter jejuni subsp. jejuni D42a plasmid pTet-D42a, complete sequence) position: , mismatch: 7, identity: 0.774

tgttttttcttattaaataaagattgagtca	CRISPR spacer
tgttttttctttttaaataaagtaaaaataa	Protospacer
*********** **********   .*.* *

117. spacer 2.19|802262|31|NZ_CP046327|CRT matches to NZ_CP017026 (Campylobacter coli plasmid pCC14983A-1, complete sequence) position: , mismatch: 7, identity: 0.774

tgttttttcttattaaataaagattgagtca	CRISPR spacer
tgttttttctttttaaataaagtaaaaataa	Protospacer
*********** **********   .*.* *

118. spacer 2.19|802262|31|NZ_CP046327|CRT matches to NZ_CP007182 (Campylobacter coli RM4661 plasmid pRM4661_48kbp, complete sequence) position: , mismatch: 7, identity: 0.774

tgttttttcttattaaataaagattgagtca	CRISPR spacer
tgttttttctttttaaataaagtaaaaataa	Protospacer
*********** **********   .*.* *

119. spacer 6.3|1384914|37|NZ_CP046327|CRISPRCasFinder,CRT,PILER-CR matches to MF417840 (Uncultured Caudovirales phage clone 2AX_3, partial genome) position: , mismatch: 7, identity: 0.811

cattgaaaatagtgacttttacgaaaaatttgctaaa	CRISPR spacer
agttgaaaatagttacttttacgtaaaattttttcaa	Protospacer
 .*********** ********* ******* .* **

120. spacer 11.3|3570304|29|NZ_CP046327|CRT matches to MN693383 (Marine virus AFVG_25M295, complete genome) position: , mismatch: 7, identity: 0.759

aacaacaggttctacaggaccaacaggaa	CRISPR spacer
tttgtcaggttctactggaccaacaggac	Protospacer
  .. ********** ************

121. spacer 11.3|3570304|29|NZ_CP046327|CRT matches to MN693263 (Marine virus AFVG_25M296, complete genome) position: , mismatch: 7, identity: 0.759

aacaacaggttctacaggaccaacaggaa	CRISPR spacer
tggtacaggtccaacaggaccaacaggac	Protospacer
 .  ******.* ***************

122. spacer 11.3|3570304|29|NZ_CP046327|CRT matches to MN693263 (Marine virus AFVG_25M296, complete genome) position: , mismatch: 7, identity: 0.759

aacaacaggttctacaggaccaacaggaa	CRISPR spacer
tgctacaggtgttacaggaccaacaggtt	Protospacer
 .* ****** .***************

123. spacer 11.3|3570304|29|NZ_CP046327|CRT matches to NZ_CP040345 (Bacillus albus strain DLOU-Yingkou plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.759

aacaacaggttctacaggaccaacaggaa	CRISPR spacer
ccctacaggatcaacaggaccaacaggcc	Protospacer
  * ***** ** **************

124. spacer 11.3|3570304|29|NZ_CP046327|CRT matches to AP014233 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C92-MedDCM-OCT-S33-C95, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 7, identity: 0.759

aacaacaggttctacaggaccaacaggaa	CRISPR spacer
tggtataggttctacacaaccaacaggaa	Protospacer
 .  *.********** .***********

125. spacer 11.3|3570304|29|NZ_CP046327|CRT matches to MN693278 (Marine virus AFVG_25M482, complete genome) position: , mismatch: 7, identity: 0.759

aacaacaggttctacaggaccaacaggaa	CRISPR spacer
tggaacaggttctactgtaccaacagcat	Protospacer
 . ************ * ******** *

126. spacer 11.13|3570817|29|NZ_CP046327|CRT matches to MN480762 (Streptococcus salivarius strain NU10 plasmid pSsal-NU10, complete sequence) position: , mismatch: 7, identity: 0.759

agcaaccggagcaaatggtttggtaggtc	CRISPR spacer
ggttacgggagcaactggtttggtaggga	Protospacer
.*. ** ******* ************

127. spacer 11.16|3570961|29|NZ_CP046327|CRT matches to MG945903 (UNVERIFIED: Microviridae sp. isolate 3021-1711, partial genome) position: , mismatch: 7, identity: 0.759

cccaacgggagcagatggagcagtaggtc	CRISPR spacer
tgtaacgggagcagagggagcagaaggag	Protospacer
. .************ ******* ***

128. spacer 2.7|802065|37|NZ_CP046327|PILER-CR,CRISPRCasFinder matches to NZ_CP034684 (Bacillus sp. BD59S plasmid pBTBD59S1, complete sequence) position: , mismatch: 8, identity: 0.784

tgttataatattaaaacacaactaaaatatacagaaa	CRISPR spacer
tgactatatattaaaacacaaccaaaatattcagaat	Protospacer
** .   ***************.******* *****

129. spacer 2.19|802262|31|NZ_CP046327|CRT matches to NZ_CP053971 (Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.742

tgttttttcttattaaataaagattgagtca	CRISPR spacer
atctttttcttacttaataaagattgatgga	Protospacer
  .*********.* ************   *

130. spacer 2.19|802262|31|NZ_CP046327|CRT matches to NZ_CP039724 (Bacillus thuringiensis strain BT-59 plasmid p3, complete sequence) position: , mismatch: 8, identity: 0.742

tgttttttcttattaaataaagattgagtca	CRISPR spacer
atctttttcttacttaataaagattgatgga	Protospacer
  .*********.* ************   *

131. spacer 2.19|802262|31|NZ_CP046327|CRT matches to NZ_CP013278 (Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-3-235K, complete sequence) position: , mismatch: 8, identity: 0.742

tgttttttcttattaaataaagattgagtca	CRISPR spacer
atctttttcttacttaataaagattgatgga	Protospacer
  .*********.* ************   *

132. spacer 2.19|802262|31|NZ_CP046327|CRT matches to NC_018509 (Bacillus thuringiensis HD-789 plasmid pBTHD789-2, complete sequence) position: , mismatch: 8, identity: 0.742

tgttttttcttattaaataaagattgagtca	CRISPR spacer
atctttttcttacttaataaagattgatgga	Protospacer
  .*********.* ************   *

133. spacer 2.19|802262|31|NZ_CP046327|CRT matches to NZ_CP051859 (Bacillus thuringiensis serovar israelensis strain BGSC 4Q7rifR plasmid pBtic235, complete sequence) position: , mismatch: 8, identity: 0.742

tgttttttcttattaaataaagattgagtca	CRISPR spacer
atctttttcttacttaataaagattgatgga	Protospacer
  .*********.* ************   *

134. spacer 2.19|802262|31|NZ_CP046327|CRT matches to NZ_CP009347 (Bacillus thuringiensis HD1002 plasmid 3, complete sequence) position: , mismatch: 8, identity: 0.742

tgttttttcttattaaataaagattgagtca	CRISPR spacer
atctttttcttacttaataaagattgatgga	Protospacer
  .*********.* ************   *

135. spacer 2.19|802262|31|NZ_CP046327|CRT matches to NZ_CP045025 (Bacillus thuringiensis strain JW-1 plasmid p3, complete sequence) position: , mismatch: 8, identity: 0.742

tgttttttcttattaaataaagattgagtca	CRISPR spacer
atctttttcttacttaataaagattgatgga	Protospacer
  .*********.* ************   *

136. spacer 2.19|802262|31|NZ_CP046327|CRT matches to NC_014633 (Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence) position: , mismatch: 8, identity: 0.742

tgttttttcttattaaataaagattgagtca	CRISPR spacer
atttttttctgatttaataaagattatctta	Protospacer
  ******** *** **********.  *.*

137. spacer 3.6|1151984|36|NZ_CP046327|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP017932 (Lactobacillus sakei strain LK-145 plasmid pLs145-a, complete sequence) position: , mismatch: 8, identity: 0.778

agataatctaggcacacatacaatgcgcaaaacttt	CRISPR spacer
aaactatctaggcacacataccatgcgtaaaaccgg	Protospacer
*.*. **************** *****.*****.

138. spacer 7.9|1496220|36|NZ_CP046327|CRISPRCasFinder,CRT,PILER-CR matches to MK373783 (Escherichia phage vB_EcoM_KWBSE43-6, complete genome) position: , mismatch: 8, identity: 0.778

tattatgtagtcatatatttcaaactctaatttcgt	CRISPR spacer
ttttatgtactcaaatatttcaaactctgaagccct	Protospacer
* ******* *** **************.*  .* *

139. spacer 8.6|1705164|37|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to MN856006 (Siphoviridae sp. isolate 29, complete genome) position: , mismatch: 8, identity: 0.784

ttttagtatattttttaggtctgccctctttaaaact	CRISPR spacer
agacggtatattttttaggtctgccttctttaaagtt	Protospacer
   ..********************.********..*

140. spacer 8.6|1705164|37|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 8, identity: 0.784

ttttagtatattttttaggtctgccctctttaaaact	CRISPR spacer
tcttagtatattttttaggtctaccttcccggaaatt	Protospacer
*.********************.**.**.. .***.*

141. spacer 8.6|1705164|37|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 8, identity: 0.784

ttttagtatattttttaggtctgccctctttaaaact	CRISPR spacer
tcttagtatattttttaggtctaccttcccggaaatt	Protospacer
*.********************.**.**.. .***.*

142. spacer 8.6|1705164|37|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 8, identity: 0.784

ttttagtatattttttaggtctgccctctttaaaact	CRISPR spacer
tcttagtatattttttaggtctaccttcccggaaatt	Protospacer
*.********************.**.**.. .***.*

143. spacer 8.6|1705164|37|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 8, identity: 0.784

ttttagtatattttttaggtctgccctctttaaaact	CRISPR spacer
tcttagtatattttttaggtctaccttcccggaaatt	Protospacer
*.********************.**.**.. .***.*

144. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020005 (Bacillus thuringiensis strain Bacillus thuringiensis L-7601 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.789

aatttatatatatatatatatatattaa-------agtcagaccc	CRISPR spacer
aatatatatatatatatatatatattaatttatatagt-------	Protospacer
*** ************************       ***

145. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to NC_007021 (Staphylococcus phage Twort, complete genome) position: , mismatch: 8, identity: 0.789

aatttatatatatatatatatatattaaagtcagaccc-	CRISPR spacer
catttatttatatatatatatata-taaagtataacata	Protospacer
 ****** **************** ******  .** .

146. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to MT151386 (Staphylococcus virus Twort, complete genome) position: , mismatch: 8, identity: 0.789

aatttatatatatatatatatatattaaagtcagaccc-	CRISPR spacer
catttatttatatatatatatata-taaagtataacata	Protospacer
 ****** **************** ******  .** .

147. spacer 11.3|3570304|29|NZ_CP046327|CRT matches to MT375525 (Pelagibacter phage Greip EXVC02, complete genome) position: , mismatch: 8, identity: 0.724

aacaacaggttctacaggaccaacaggaa	CRISPR spacer
aacaataggttctacaggaacaagtttgt	Protospacer
*****.************* ***    .

148. spacer 2.7|802065|37|NZ_CP046327|PILER-CR,CRISPRCasFinder matches to NZ_CP009691 (Bacillus mycoides strain ATCC 6462 plasmid pBMX_1, complete sequence) position: , mismatch: 9, identity: 0.757

tgttataatattaaaacacaactaaaatatacagaaa	CRISPR spacer
agcaataatattaatacacaagtaaaatatacgatag	Protospacer
 *. ********** ****** **********.. *.

149. spacer 2.16|802064|38|NZ_CP046327|CRT matches to NZ_CP034684 (Bacillus sp. BD59S plasmid pBTBD59S1, complete sequence) position: , mismatch: 9, identity: 0.763

gtgttataatattaaaacacaactaaaatatacagaaa	CRISPR spacer
atgactatatattaaaacacaaccaaaatattcagaat	Protospacer
.** .   ***************.******* *****

150. spacer 2.19|802262|31|NZ_CP046327|CRT matches to NC_011246 (Borrelia recurrentis A1 plasmid pl124, complete sequence) position: , mismatch: 9, identity: 0.71

tgttttttcttattaaataaagattgagtca	CRISPR spacer
caatttttcttatgaaattaagattgataag	Protospacer
.. ********** **** ********   .

151. spacer 2.19|802262|31|NZ_CP046327|CRT matches to NC_011247 (Borrelia duttonii Ly plasmid pl165, complete sequence) position: , mismatch: 9, identity: 0.71

tgttttttcttattaaataaagattgagtca	CRISPR spacer
caatttttcttatgaaattaagattgataag	Protospacer
.. ********** **** ********   .

152. spacer 2.19|802262|31|NZ_CP046327|CRT matches to NZ_CP028890 (Borrelia turcica IST7 plasmid lp34, complete sequence) position: , mismatch: 9, identity: 0.71

tgttttttcttattaaataaagattgagtca	CRISPR spacer
ctttttttctttttaaataaagataagacct	Protospacer
. ********* ************ ....*

153. spacer 2.19|802262|31|NZ_CP046327|CRT matches to NZ_CP017832 (Butyrivibrio hungatei strain MB2003 plasmid pNP144, complete sequence) position: , mismatch: 9, identity: 0.71

tgttttttcttattaaataaagattgagtca	CRISPR spacer
actttcttcttattaaatatagatttctttt	Protospacer
  ***.************* *****   *.

154. spacer 3.6|1151984|36|NZ_CP046327|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LN890332 (Leuconostoc gelidum subsp. gasicomitatum KG16-1 isolate LEKG1 plasmid II, complete sequence) position: , mismatch: 9, identity: 0.75

agataatctaggcacacatacaatgcgcaaaacttt	CRISPR spacer
caactatctaggcacacataccatgcgtaaaacagg	Protospacer
 .*. **************** *****.*****

155. spacer 3.6|1151984|36|NZ_CP046327|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032750 (Lactobacillus paraplantarum strain DSM 10667 plasmid unnamed6, complete sequence) position: , mismatch: 9, identity: 0.75

agataatctaggcacacatacaatgcgcaaaacttt	CRISPR spacer
caactatctaggcacacatacgatgcgtaaaacagg	Protospacer
 .*. ****************.*****.*****

156. spacer 3.6|1151984|36|NZ_CP046327|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP042398 (Leuconostoc citreum strain CBA3623 plasmid unnamed5, complete sequence) position: , mismatch: 9, identity: 0.75

agataatctaggcacacatacaatgcgcaaaacttt	CRISPR spacer
caactatctaggcacacataccatgcgtaaaacagg	Protospacer
 .*. **************** *****.*****

157. spacer 3.6|1151984|36|NZ_CP046327|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP042376 (Leuconostoc carnosum strain CBA3620 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.75

agataatctaggcacacatacaatgcgcaaaacttt	CRISPR spacer
caactatctaggcacacataccatgcgtaaaacagg	Protospacer
 .*. **************** *****.*****

158. spacer 3.6|1151984|36|NZ_CP046327|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP042400 (Weissella hellenica strain CBA3632 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.75

agataatctaggcacacatacaatgcgcaaaacttt	CRISPR spacer
accctatctaggcacacataccatgcgtaaaacagg	Protospacer
*  . **************** *****.*****

159. spacer 3.6|1151984|36|NZ_CP046327|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014612 (Leuconostoc mesenteroides subsp. jonggajibkimchii strain DRC1506 plasmid pDRC1, complete sequence) position: , mismatch: 9, identity: 0.75

agataatctaggcacacatacaatgcgcaaaacttt	CRISPR spacer
caactatctaggcacacataccatgcgtaaaacagg	Protospacer
 .*. **************** *****.*****

160. spacer 3.6|1151984|36|NZ_CP046327|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017200 (Leuconostoc gelidum subsp. gasicomitatum strain TMW 2.1619 plasmid pL21619-3, complete genome) position: , mismatch: 9, identity: 0.75

agataatctaggcacacatacaatgcgcaaaacttt	CRISPR spacer
caactatctaggcacacatacgatgcgtaaaacagg	Protospacer
 .*. ****************.*****.*****

161. spacer 3.6|1151984|36|NZ_CP046327|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP042384 (Leuconostoc pseudomesenteroides strain CBA3630 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.75

agataatctaggcacacatacaatgcgcaaaacttt	CRISPR spacer
taactatctaggcacccataccatgcgcaaaacagg	Protospacer
 .*. ********** ***** ***********

162. spacer 3.6|1151984|36|NZ_CP046327|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012874 (Weissella cibaria strain CH2 plasmid pMKC01, complete sequence) position: , mismatch: 9, identity: 0.75

agataatctaggcacacatacaatgcgcaaaacttt	CRISPR spacer
caactatctaggcacacatacgatgcgtaaaacagg	Protospacer
 .*. ****************.*****.*****

163. spacer 3.6|1151984|36|NZ_CP046327|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012876 (Weissella cibaria strain CH2 plasmid pMKC03, complete sequence) position: , mismatch: 9, identity: 0.75

agataatctaggcacacatacaatgcgcaaaacttt	CRISPR spacer
taactatctaggcacacataccatgcgtaaaacagg	Protospacer
 .*. **************** *****.*****

164. spacer 3.6|1151984|36|NZ_CP046327|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012876 (Weissella cibaria strain CH2 plasmid pMKC03, complete sequence) position: , mismatch: 9, identity: 0.75

agataatctaggcacacatacaatgcgcaaaacttt	CRISPR spacer
taactatctaggcacacataccatgcgtaaaacagg	Protospacer
 .*. **************** *****.*****

165. spacer 3.6|1151984|36|NZ_CP046327|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012876 (Weissella cibaria strain CH2 plasmid pMKC03, complete sequence) position: , mismatch: 9, identity: 0.75

agataatctaggcacacatacaatgcgcaaaacttt	CRISPR spacer
taactatctaggcacacataccatgcgtaaaacagg	Protospacer
 .*. **************** *****.*****

166. spacer 4.1|1289886|33|NZ_CP046327|CRISPRCasFinder matches to NZ_CP053838 (Aliiarcobacter faecis strain CCUG 66484 plasmid pAFAEC, complete sequence) position: , mismatch: 9, identity: 0.727

cttctgatttagcaaataaagctgtaaataagt	CRISPR spacer
aattagatttagcaaataaagctttaaatgttc	Protospacer
  *. ****************** *****.  .

167. spacer 4.1|1289886|33|NZ_CP046327|CRISPRCasFinder matches to NZ_CP032824 (Arcobacter cryaerophilus ATCC 43158 plasmid pACRY43158, complete sequence) position: , mismatch: 9, identity: 0.727

cttctgatttagcaaataaagctgtaaataagt	CRISPR spacer
gattagatttagcaaataaagctttaaatgttc	Protospacer
  *. ****************** *****.  .

168. spacer 4.1|1289886|33|NZ_CP046327|CRISPRCasFinder matches to NZ_MK715471 (Arcobacter cryaerophilus strain M830MA plasmid pM830MA, complete sequence) position: , mismatch: 9, identity: 0.727

cttctgatttagcaaataaagctgtaaataagt	CRISPR spacer
gattggatttagcaaataaagctttaaatgttc	Protospacer
  *. ****************** *****.  .

169. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020005 (Bacillus thuringiensis strain Bacillus thuringiensis L-7601 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.763

aatttatatatatatatatatatattaaagtcagaccc	CRISPR spacer
aatatatatatatatatatatatattatacataattac	Protospacer
*** *********************** *  .*. . *

170. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011375 (Moraxella bovoculi strain 58069 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.763

aatttatatatatatatatatatattaaagtcagaccc	CRISPR spacer
catatatatatatatatatatatattaactaaaaacat	Protospacer
 ** ************************    *.** .

171. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040345 (Bacillus albus strain DLOU-Yingkou plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.763

aatttatatatatatatatatatattaaagtcagaccc	CRISPR spacer
tatttatatatatatatatatatatgaagttaaatgac	Protospacer
 ************************ **. * *.   *

172. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009698 (Bacillus anthracis strain BA1035 plasmid pXO2, complete sequence) position: , mismatch: 9, identity: 0.763

aatttatatatatatatatatatattaaagtcagaccc	CRISPR spacer
aaattatatatatatatatatatatcaaaagaaaaaag	Protospacer
** **********************.***.  *.*

173. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009542 (Bacillus anthracis strain BA1015 plasmid pXO2, complete sequence) position: , mismatch: 9, identity: 0.763

aatttatatatatatatatatatattaaagtcagaccc	CRISPR spacer
aaattatatatatatatatatatatcaaaagaaaaaag	Protospacer
** **********************.***.  *.*

174. spacer 9.1|2283810|37|NZ_CP046327|CRISPRCasFinder matches to NC_022879 (Enterococcus mundtii QU 25 plasmid pQY182, complete sequence) position: , mismatch: 9, identity: 0.757

gtagaacgtcttatcttctatatttagataaccatat	CRISPR spacer
acttgacgtcttaccttctatatctagataaccactt	Protospacer
..  .********.*********.**********. *

175. spacer 13.16|3935448|37|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033246 (Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence) position: , mismatch: 9, identity: 0.757

ttgtttatacctttaatctttaaaattaaatataaaa	CRISPR spacer
agagttatacctttattctttaatattaaattgtaaa	Protospacer
  . *********** ******* *******   ***

176. spacer 13.16|3935448|37|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033248 (Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence) position: , mismatch: 9, identity: 0.757

ttgtttatacctttaatctttaaaattaaatataaaa	CRISPR spacer
agagttatacctttattctttaatattaaattgtaaa	Protospacer
  . *********** ******* *******   ***

177. spacer 2.16|802064|38|NZ_CP046327|CRT matches to NZ_CP009691 (Bacillus mycoides strain ATCC 6462 plasmid pBMX_1, complete sequence) position: , mismatch: 10, identity: 0.737

gtgttataatattaaaacacaactaaaatatacagaaa	CRISPR spacer
tagcaataatattaatacacaagtaaaatatacgatag	Protospacer
  *. ********** ****** **********.. *.

178. spacer 3.5|1151918|37|NZ_CP046327|CRISPRCasFinder,CRT,PILER-CR matches to HG798901 (Clostridium phage phiCDHM11 complete genome) position: , mismatch: 10, identity: 0.73

gattttttcatgcggaggaaaattgatgtggggacat	CRISPR spacer
gattttttcatgcggaggaaaattgatnnnnnnnnnn	Protospacer
***************************

179. spacer 3.6|1151984|36|NZ_CP046327|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033609 (Weissella hellenica strain 0916-4-2 plasmid pWHSP041, complete sequence) position: , mismatch: 10, identity: 0.722

agataatctaggcacacatacaatgcgcaaaacttt	CRISPR spacer
gacctatctaggcacacataccatgcgtaaaacagg	Protospacer
.. . **************** *****.*****

180. spacer 4.1|1289886|33|NZ_CP046327|CRISPRCasFinder matches to AP019525 (Tenacibaculum phage PTm5 DNA, complete genome) position: , mismatch: 10, identity: 0.697

cttctgatttagcaaataaagctgtaaataagt	CRISPR spacer
ttaaagatttaccaaaaaaagctgtaaatggta	Protospacer
.*   ****** **** ************..

181. spacer 4.1|1289886|33|NZ_CP046327|CRISPRCasFinder matches to AP019524 (Tenacibaculum phage PTm1 DNA, complete genome) position: , mismatch: 10, identity: 0.697

cttctgatttagcaaataaagctgtaaataagt	CRISPR spacer
ttaaagatttaccaaaaaaagctgtaaatggta	Protospacer
.*   ****** **** ************..

182. spacer 4.5|1289886|34|NZ_CP046327|CRT matches to NZ_CP032824 (Arcobacter cryaerophilus ATCC 43158 plasmid pACRY43158, complete sequence) position: , mismatch: 10, identity: 0.706

cttctgatttagcaaataaagctgtaaataagtc	CRISPR spacer
gattagatttagcaaataaagctttaaatgttca	Protospacer
  *. ****************** *****.  .

183. spacer 4.5|1289886|34|NZ_CP046327|CRT matches to NZ_MK715471 (Arcobacter cryaerophilus strain M830MA plasmid pM830MA, complete sequence) position: , mismatch: 10, identity: 0.706

cttctgatttagcaaataaagctgtaaataagtc	CRISPR spacer
gattggatttagcaaataaagctttaaatgttca	Protospacer
  *. ****************** *****.  .

184. spacer 4.5|1289886|34|NZ_CP046327|CRT matches to NZ_CP053838 (Aliiarcobacter faecis strain CCUG 66484 plasmid pAFAEC, complete sequence) position: , mismatch: 10, identity: 0.706

cttctgatttagcaaataaagctgtaaataagtc	CRISPR spacer
aattagatttagcaaataaagctttaaatgttca	Protospacer
  *. ****************** *****.  .

185. spacer 4.5|1289886|34|NZ_CP046327|CRT matches to AP019525 (Tenacibaculum phage PTm5 DNA, complete genome) position: , mismatch: 10, identity: 0.706

cttctgatttagcaaataaagctgtaaataagtc	CRISPR spacer
ttaaagatttaccaaaaaaagctgtaaatggtac	Protospacer
.*   ****** **** ************..  *

186. spacer 4.5|1289886|34|NZ_CP046327|CRT matches to AP019524 (Tenacibaculum phage PTm1 DNA, complete genome) position: , mismatch: 10, identity: 0.706

cttctgatttagcaaataaagctgtaaataagtc	CRISPR spacer
ttaaagatttaccaaaaaaagctgtaaatggtac	Protospacer
.*   ****** **** ************..  *

187. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to KY554775 (Lactococcus phage AM11, complete genome) position: , mismatch: 10, identity: 0.737

aatttatatatatatatatatatattaaagtcagaccc	CRISPR spacer
tatatatatatatatatatatatattaaattattttat	Protospacer
 ** ************************* *    . .

188. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to KY554773 (Lactococcus phage AM8, complete genome) position: , mismatch: 10, identity: 0.737

aatttatatatatatatatatatattaaagtcagaccc	CRISPR spacer
tatatatatatatatatatatatattaaattattttat	Protospacer
 ** ************************* *    . .

189. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to KY554769 (Lactococcus phage AM2, complete genome) position: , mismatch: 10, identity: 0.737

aatttatatatatatatatatatattaaagtcagaccc	CRISPR spacer
tatatatatatatatatatatatattaaattattttat	Protospacer
 ** ************************* *    . .

190. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to KY554770 (Lactococcus phage AM3, complete genome) position: , mismatch: 10, identity: 0.737

aatttatatatatatatatatatattaaagtcagaccc	CRISPR spacer
tatatatatatatatatatatatattaaattattttat	Protospacer
 ** ************************* *    . .

191. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to KY554776 (Lactococcus phage AM12, complete genome) position: , mismatch: 10, identity: 0.737

aatttatatatatatatatatatattaaagtcagaccc	CRISPR spacer
tatatatatatatatatatatatattaaattattttat	Protospacer
 ** ************************* *    . .

192. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to KY554774 (Lactococcus phage AM9, complete genome) position: , mismatch: 10, identity: 0.737

aatttatatatatatatatatatattaaagtcagaccc	CRISPR spacer
tatatatatatatatatatatatattaaattattttat	Protospacer
 ** ************************* *    . .

193. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to MH321490 (Staphylococcus phage Quidividi, complete genome) position: , mismatch: 10, identity: 0.737

aatttatatatatatatatatatattaa-----agtcagaccc	CRISPR spacer
tatatatatatatttatatatatattaattattaataa-----	Protospacer
 ** ********* **************     *.* *

194. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041286 (Escherichia coli strain 54 plasmid p54-tetX, complete sequence) position: , mismatch: 10, identity: 0.737

aatttatatatatatatatatatattaaagtcagaccc	CRISPR spacer
aaaatatatgtatatataaatatattaaagttgtgtca	Protospacer
**  *****.******** ************.. ..*

195. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047578 (Escherichia coli strain 94EC plasmid p94EC-2, complete sequence) position: , mismatch: 10, identity: 0.737

aatttatatatatatatatatatattaaagtcagaccc	CRISPR spacer
aaaatatatgtatatataaatatattaaagttgtgtca	Protospacer
**  *****.******** ************.. ..*

196. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047572 (Escherichia coli strain 2EC1 plasmid p2EC1-1, complete sequence) position: , mismatch: 10, identity: 0.737

aatttatatatatatatatatatattaaagtcagaccc	CRISPR spacer
aaaatatatgtatatataaatatattaaagttgtgtca	Protospacer
**  *****.******** ************.. ..*

197. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP037909 (Escherichia coli strain LHM10-1 plasmid pLHM10-1, complete sequence) position: , mismatch: 10, identity: 0.737

aatttatatatatatatatatatattaaagtcagaccc	CRISPR spacer
aaaatatatgtatatataaatatattaaagttgtgtca	Protospacer
**  *****.******** ************.. ..*

198. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041443 (Escherichia coli strain YPE12 plasmid pYPE12-101k-tetX4, complete sequence) position: , mismatch: 10, identity: 0.737

aatttatatatatatatatatatattaaagtcagaccc	CRISPR spacer
aaaatatatgtatatataaatatattaaagttgtgtca	Protospacer
**  *****.******** ************.. ..*

199. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MK134376 (Escherichia coli strain 47EC plasmid p47EC, complete sequence) position: , mismatch: 10, identity: 0.737

aatttatatatatatatatatatattaaagtcagaccc	CRISPR spacer
aaaatatatgtatatataaatatattaaagttgtgtca	Protospacer
**  *****.******** ************.. ..*

200. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to MT219826 (Escherichia coli strain RW8-1 plasmid pRW8-1_122k_tetX, complete sequence) position: , mismatch: 10, identity: 0.737

aatttatatatatatatatatatattaaagtcagaccc	CRISPR spacer
aaaatatatgtatatataaatatattaaagttgtgtca	Protospacer
**  *****.******** ************.. ..*

201. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to MT219817 (Escherichia coli strain RF148-2 plasmid pRF148-2_101k_tetX, complete sequence) position: , mismatch: 10, identity: 0.737

aatttatatatatatatatatatattaaagtcagaccc	CRISPR spacer
aaaatatatgtatatataaatatattaaagttgtgtca	Protospacer
**  *****.******** ************.. ..*

202. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to MT219817 (Escherichia coli strain RF148-2 plasmid pRF148-2_101k_tetX, complete sequence) position: , mismatch: 10, identity: 0.737

aatttatatatatatatatatatattaaagtcagaccc	CRISPR spacer
aaaatatatgtatatataaatatattaaagttgtgtca	Protospacer
**  *****.******** ************.. ..*

203. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to MT219818 (Escherichia coli strain RF148-1 plasmid pRF148-1_119k_tetX, complete sequence) position: , mismatch: 10, identity: 0.737

aatttatatatatatatatatatattaaagtcagaccc	CRISPR spacer
aaaatatatgtatatataaatatattaaagttgtgtca	Protospacer
**  *****.******** ************.. ..*

204. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to MT219819 (Escherichia coli strain RF52-1 plasmid pRF52-1_119k_tetX, complete sequence) position: , mismatch: 10, identity: 0.737

aatttatatatatatatatatatattaaagtcagaccc	CRISPR spacer
aaaatatatgtatatataaatatattaaagttgtgtca	Protospacer
**  *****.******** ************.. ..*

205. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045188 (Escherichia coli strain NT1F31 plasmid pNT1F31-tetX4, complete sequence) position: , mismatch: 10, identity: 0.737

aatttatatatatatatatatatattaaagtcagaccc	CRISPR spacer
aaaatatatgtatatataaatatattaaagttgtgtca	Protospacer
**  *****.******** ************.. ..*

206. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045188 (Escherichia coli strain NT1F31 plasmid pNT1F31-tetX4, complete sequence) position: , mismatch: 10, identity: 0.737

aatttatatatatatatatatatattaaagtcagaccc	CRISPR spacer
aaaatatatgtatatataaatatattaaagttgtgtca	Protospacer
**  *****.******** ************.. ..*

207. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045188 (Escherichia coli strain NT1F31 plasmid pNT1F31-tetX4, complete sequence) position: , mismatch: 10, identity: 0.737

aatttatatatatatatatatatattaaagtcagaccc	CRISPR spacer
aaaatatatgtatatataaatatattaaagttgtgtca	Protospacer
**  *****.******** ************.. ..*

208. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038140 (Escherichia coli strain G3X16-2 plasmid pG3X16-2-3, complete sequence) position: , mismatch: 10, identity: 0.737

aatttatatatatatatatatatattaaagtcagaccc	CRISPR spacer
aaaatatatgtatatataaatatattaaagttgtgtca	Protospacer
**  *****.******** ************.. ..*

209. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038140 (Escherichia coli strain G3X16-2 plasmid pG3X16-2-3, complete sequence) position: , mismatch: 10, identity: 0.737

aatttatatatatatatatatatattaaagtcagaccc	CRISPR spacer
aaaatatatgtatatataaatatattaaagttgtgtca	Protospacer
**  *****.******** ************.. ..*

210. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038140 (Escherichia coli strain G3X16-2 plasmid pG3X16-2-3, complete sequence) position: , mismatch: 10, identity: 0.737

aatttatatatatatatatatatattaaagtcagaccc	CRISPR spacer
aaaatatatgtatatataaatatattaaagttgtgtca	Protospacer
**  *****.******** ************.. ..*

211. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038140 (Escherichia coli strain G3X16-2 plasmid pG3X16-2-3, complete sequence) position: , mismatch: 10, identity: 0.737

aatttatatatatatatatatatattaaagtcagaccc	CRISPR spacer
aaaatatatgtatatataaatatattaaagttgtgtca	Protospacer
**  *****.******** ************.. ..*

212. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047460 (Escherichia coli strain ZF31 plasmid pZF31-tetX-119kb, complete sequence) position: , mismatch: 10, identity: 0.737

aatttatatatatatatatatatattaaagtcagaccc	CRISPR spacer
aaaatatatgtatatataaatatattaaagttgtgtca	Protospacer
**  *****.******** ************.. ..*

213. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047460 (Escherichia coli strain ZF31 plasmid pZF31-tetX-119kb, complete sequence) position: , mismatch: 10, identity: 0.737

aatttatatatatatatatatatattaaagtcagaccc	CRISPR spacer
aaaatatatgtatatataaatatattaaagttgtgtca	Protospacer
**  *****.******** ************.. ..*

214. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047466 (Escherichia coli strain ZF34 plasmid pZF34-tetX-114kb, complete sequence) position: , mismatch: 10, identity: 0.737

aatttatatatatatatatatatattaaagtcagaccc	CRISPR spacer
aaaatatatgtatatataaatatattaaagttgtgtca	Protospacer
**  *****.******** ************.. ..*

215. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047466 (Escherichia coli strain ZF34 plasmid pZF34-tetX-114kb, complete sequence) position: , mismatch: 10, identity: 0.737

aatttatatatatatatatatatattaaagtcagaccc	CRISPR spacer
aaaatatatgtatatataaatatattaaagttgtgtca	Protospacer
**  *****.******** ************.. ..*

216. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050174 (Escherichia coli strain STB20-1 plasmid pSTB20-1T, complete sequence) position: , mismatch: 10, identity: 0.737

aatttatatatatatatatatatattaaagtcagaccc	CRISPR spacer
aaaatatatgtatatataaatatattaaagttgtgtca	Protospacer
**  *****.******** ************.. ..*

217. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041453 (Escherichia coli strain YPE3 plasmid pYPE3-92k-tetX4, complete sequence) position: , mismatch: 10, identity: 0.737

aatttatatatatatatatatatattaaagtcagaccc	CRISPR spacer
aaaatatatgtatatataaatatattaaagttgtgtca	Protospacer
**  *****.******** ************.. ..*

218. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041453 (Escherichia coli strain YPE3 plasmid pYPE3-92k-tetX4, complete sequence) position: , mismatch: 10, identity: 0.737

aatttatatatatatatatatatattaaagtcagaccc	CRISPR spacer
aaaatatatgtatatataaatatattaaagttgtgtca	Protospacer
**  *****.******** ************.. ..*

219. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MN381965 (Escherichia coli strain 16EC plasmid p16EC-9K, complete sequence) position: , mismatch: 10, identity: 0.737

aatttatatatatatatatatatattaaagtcagaccc	CRISPR spacer
aaaatatatgtatatataaatatattaaagttgtgtca	Protospacer
**  *****.******** ************.. ..*

220. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to MT219816 (Escherichia coli strain RF173-1 plasmid pRF173-1_87k_tetX, complete sequence) position: , mismatch: 10, identity: 0.737

aatttatatatatatatatatatattaaagtcagaccc	CRISPR spacer
aaaatatatgtatatataaatatattaaagttgtgtca	Protospacer
**  *****.******** ************.. ..*

221. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to MT219820 (Escherichia coli strain RF108-2 plasmid pRF108-2_97k_tetX, complete sequence) position: , mismatch: 10, identity: 0.737

aatttatatatatatatatatatattaaagtcagaccc	CRISPR spacer
aaaatatatgtatatataaatatattaaagttgtgtca	Protospacer
**  *****.******** ************.. ..*

222. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to MT219823 (Escherichia coli strain RF10-1 plasmid pRF10-1_119k_tetX, complete sequence) position: , mismatch: 10, identity: 0.737

aatttatatatatatatatatatattaaagtcagaccc	CRISPR spacer
aaaatatatgtatatataaatatattaaagttgtgtca	Protospacer
**  *****.******** ************.. ..*

223. spacer 8.14|1705696|37|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to MF288922 (Bacillus phage Janet, complete genome) position: , mismatch: 10, identity: 0.73

cagcggatgaattatttatgttaattggagatggaga	CRISPR spacer
ttaaggaggatttatttatgttaattggagaacgcgt	Protospacer
. . *** ** ********************  * *

224. spacer 8.14|1705696|37|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to MH538296 (Bacillus phage Maceta, complete genome) position: , mismatch: 10, identity: 0.73

cagcggatgaattatttatgttaattggagatggaga	CRISPR spacer
ttaaggaggatttatttatgttaattggagaacgcgt	Protospacer
. . *** ** ********************  * *

225. spacer 8.14|1705696|37|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to NC_024216 (Bacillus phage CAM003, complete genome) position: , mismatch: 10, identity: 0.73

cagcggatgaattatttatgttaattggagatggaga	CRISPR spacer
ttaaggaggatttatttatgttaattggagaacgcgt	Protospacer
. . *** ** ********************  * *

226. spacer 8.14|1705696|37|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to KJ489400 (Bacillus phage Hoody T, complete genome) position: , mismatch: 10, identity: 0.73

cagcggatgaattatttatgttaattggagatggaga	CRISPR spacer
ttaaggaggatttatttatgttaattggagaacgcgt	Protospacer
. . *** ** ********************  * *

227. spacer 8.14|1705696|37|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to MF288921 (Bacillus phage OTooleKemple52, complete genome) position: , mismatch: 10, identity: 0.73

cagcggatgaattatttatgttaattggagatggaga	CRISPR spacer
ttaaggaggatttatttatgttaattggagaacgcgt	Protospacer
. . *** ** ********************  * *

228. spacer 8.14|1705696|37|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to MH638310 (Bacillus phage Kamfam, complete genome) position: , mismatch: 10, identity: 0.73

cagcggatgaattatttatgttaattggagatggaga	CRISPR spacer
ttaaggaggatttatttatgttaattggagaacgcgt	Protospacer
. . *** ** ********************  * *

229. spacer 8.14|1705696|37|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to MK215646 (Bacillus phage vB_BthM-Goe5, complete genome) position: , mismatch: 10, identity: 0.73

cagcggatgaattatttatgttaattggagatggaga	CRISPR spacer
ttaaggaggatttatttatgttaattggagaacgcgt	Protospacer
. . *** ** ********************  * *

230. spacer 8.14|1705696|37|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to KU737346 (Bacillus phage Vinny, complete genome) position: , mismatch: 10, identity: 0.73

cagcggatgaattatttatgttaattggagatggaga	CRISPR spacer
ttaaggaggatttatttatgttaattggagaacgcgt	Protospacer
. . *** ** ********************  * *

231. spacer 8.14|1705696|37|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to NC_024207 (Bacillus phage Evoli, complete genome) position: , mismatch: 10, identity: 0.73

cagcggatgaattatttatgttaattggagatggaga	CRISPR spacer
ttaaggaggatttatttatgttaattggagaacgcgt	Protospacer
. . *** ** ********************  * *

232. spacer 8.14|1705696|37|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to MF498901 (Bacillus phage Anthony, complete genome) position: , mismatch: 10, identity: 0.73

cagcggatgaattatttatgttaattggagatggaga	CRISPR spacer
ttaaggaggatttatttatgttaattggagaacgcgt	Protospacer
. . *** ** ********************  * *

233. spacer 8.14|1705696|37|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to NC_018856 (Bacillus phage Bastille, complete genome) position: , mismatch: 10, identity: 0.73

cagcggatgaattatttatgttaattggagatggaga	CRISPR spacer
ttaaggaggatttatttatgttaattggagaacgcgt	Protospacer
. . *** ** ********************  * *

234. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to MT774377 (CrAssphage cr107_1, complete genome) position: , mismatch: 11, identity: 0.711

------aatttatatatatatatatatatattaaagtcagaccc	CRISPR spacer
ttgcccaacttttatatatatatatatatatataagcc------	Protospacer
      **.** *******************  ***.*

235. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to MN694330 (Marine virus AFVG_250M1134, complete genome) position: , mismatch: 11, identity: 0.711

aatttatatatatatatatatatattaaagtcagaccc	CRISPR spacer
tattcatatatatatatatatatatgaaacatgggggg	Protospacer
 ***.******************** ***  ..*.

236. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to DQ163915 (Bacteriophage PA11, complete genome) position: , mismatch: 11, identity: 0.711

aatttatatatatatatatatatattaaagtcagaccc	CRISPR spacer
aatatatttatatatatatatatattagtattattata	Protospacer
*** *** *******************. .*.*   .

237. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to NC_007808 (Pseudomonas phage PA11, complete genome) position: , mismatch: 11, identity: 0.711

aatttatatatatatatatatatattaaagtcagaccc	CRISPR spacer
aatatatttatatatatatatatattagtattattata	Protospacer
*** *** *******************. .*.*   .

238. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to MG676466 (Pseudomonas phage TC6, complete genome) position: , mismatch: 11, identity: 0.711

aatttatatatatatatatatatattaaagtcagaccc	CRISPR spacer
aatatatttatatatatatatatattagtattattata	Protospacer
*** *** *******************. .*.*   .

239. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to MF788075 (Pseudomonas phage IME180, complete genome) position: , mismatch: 11, identity: 0.711

aatttatatatatatatatatatattaaagtcagaccc	CRISPR spacer
aatatatttatatatatatatatattagtattattata	Protospacer
*** *** *******************. .*.*   .

240. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to MN694526 (Marine virus AFVG_250M936, complete genome) position: , mismatch: 11, identity: 0.711

aatttatatatatatatatatatattaaagtcagaccc	CRISPR spacer
atattatatatatatatttatatattatagaaaacttt	Protospacer
*  ************** ********* **  *. ...

241. spacer 8.2|1704899|37|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024773 (Bacillus thuringiensis LM1212 plasmid pLM2, complete sequence) position: , mismatch: 12, identity: 0.676

gaatttagctatagaagcatcaaattgtggcacagca	CRISPR spacer
ctttccgcctatagaagcaacaaattgtgccacattg	Protospacer
   *... *********** ********* **** ..

242. spacer 8.2|1704899|37|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041075 (Bacillus tropicus strain LM1212-W3 plasmid p2, complete sequence) position: , mismatch: 12, identity: 0.676

gaatttagctatagaagcatcaaattgtggcacagca	CRISPR spacer
ctttccgcctatagaagcaacaaattgtgccacattg	Protospacer
   *... *********** ********* **** ..

243. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017217 (Borreliella burgdorferi strain B331 plasmid B331_lp38, complete sequence) position: , mismatch: 13, identity: 0.658

------aatttatatatatatatatatatattaaagtcagaccc	CRISPR spacer
caaaaaattctttatatatatatatatatatatatatc------	Protospacer
      * *.* *******************  * .**

244. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to MN807295 (Acinetobacter phage vB_AbaP_APK116, complete genome) position: , mismatch: 13, identity: 0.658

--------aatttatatatatatatatatatattaaagtcagaccc	CRISPR spacer
atgctgtctctttatatatatatatatatatatatatg--------	Protospacer
          ***********************  * *

245. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014853 (Bacillus thuringiensis strain HD12 plasmid pHD120345, complete sequence) position: , mismatch: 14, identity: 0.632

--------aatttatatatatatatatatatattaaagtcagaccc	CRISPR spacer
gtaattatgtataatatatatatatatatatattaatt--------	Protospacer
        .  * ***********************

246. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to MH892354 (Streptococcus phage SW3, complete genome) position: , mismatch: 14, identity: 0.632

--------aatttatatatatatatatatatattaaagtcagaccc	CRISPR spacer
cgctctcttttttatatatatatatatatatatatata--------	Protospacer
          ***********************  * .

247. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to NC_010077 (Staphylococcus aureus plasmid EDINA, complete sequence) position: , mismatch: 14, identity: 0.632

------aatttatatatatatatatatatattaaagtcagaccc	CRISPR spacer
aactattatcttgatatatatatatatatttataaatc------	Protospacer
       **.*  **************** *  **.**

248. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 14, identity: 0.632

aatttatatatatatatatatatattaaagtcagaccc------	CRISPR spacer
------tatatatatatatatatatatatatcaaccatttggta	Protospacer
      *******************  * .***. * .

249. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to DQ163915 (Bacteriophage PA11, complete genome) position: , mismatch: 14, identity: 0.632

------------aatttatatatatatatatatatattaaagtcagaccc	CRISPR spacer
tactatgtgtataatatatttatatatatatatatatt------------	Protospacer
            *** *** ******************

250. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to NC_007808 (Pseudomonas phage PA11, complete genome) position: , mismatch: 14, identity: 0.632

------------aatttatatatatatatatatatattaaagtcagaccc	CRISPR spacer
tactatgtgtataatatatttatatatatatatatatt------------	Protospacer
            *** *** ******************

251. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to MG676466 (Pseudomonas phage TC6, complete genome) position: , mismatch: 14, identity: 0.632

------------aatttatatatatatatatatatattaaagtcagaccc	CRISPR spacer
tactatgtgtataatatatttatatatatatatatatt------------	Protospacer
            *** *** ******************

252. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to MF788075 (Pseudomonas phage IME180, complete genome) position: , mismatch: 14, identity: 0.632

------------aatttatatatatatatatatatattaaagtcagaccc	CRISPR spacer
tactatgtgtataatatatttatatatatatatatatt------------	Protospacer
            *** *** ******************

253. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to KP027447 (Staphylococcus phage phiIPLA-C1C, complete genome) position: , mismatch: 15, identity: 0.605

------------aatttatatatatatatatatatattaaagtcagaccc	CRISPR spacer
aaggattactctaatatatatatatatttatatatact------------	Protospacer
            *** *********** ********.*

254. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to NC_002072 (Streptococcus phage DT1, complete genome) position: , mismatch: 15, identity: 0.605

--------aatttatatatatatatatatatattaaagtcagaccc	CRISPR spacer
agttacttagttactatatatatatatatttataaata--------	Protospacer
        *.**  *************** *** ** .

255. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to AF085222 (Streptococcus thermophilus bacteriophage DT1, complete genome) position: , mismatch: 15, identity: 0.605

--------aatttatatatatatatatatatattaaagtcagaccc	CRISPR spacer
agttacttagttactatatatatatatatttataaata--------	Protospacer
        *.**  *************** *** ** .

256. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to MH937502 (Streptococcus phage CHPC1083, complete genome) position: , mismatch: 15, identity: 0.605

--------aatttatatatatatatatatatattaaagtcagaccc	CRISPR spacer
agttacttagttactatatatatatatatttataaata--------	Protospacer
        *.**  *************** *** ** .

257. spacer 8.8|1705296|38|NZ_CP046327|PILER-CR,CRISPRCasFinder,CRT matches to MH937478 (Streptococcus phage CHPC951, complete genome) position: , mismatch: 15, identity: 0.605

--------aatttatatatatatatatatatattaaagtcagaccc	CRISPR spacer
agttacttagttactatatatatatatatttataaata--------	Protospacer
        *.**  *************** *** ** .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1271928 : 1327059

Clostridium_phage(78.57%)

integrase,holin,portal,plate,tail,terminase

attL 1314642:1314659|attR 1330707:1330724

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003433687.1\|1271928_1272114_+	hypothetical protein	A0A0A8WHQ4	Clostridium_phage	7.6e-13	62.1
WP_009893147.1\|1272154_1274554_-	cell wall-binding repeat-containing protein	NA	NA	NA	NA
WP_009889444.1\|1274647_1275460_-	N-acetylmuramoyl-L-alanine amidase	X5JAJ5	Clostridium_phage	9.7e-153	97.4
WP_003429958.1\|1275538_1276402_-	Abi family protein	A3QSC6	Clostridium_virus	8.4e-163	99.7
WP_009889440.1\|1276662_1276920_-\|holin	holin	A3QSC5	Clostridium_virus	1.1e-41	100.0
WP_009889435.1\|1276923_1277214_-	hypothetical protein	A0A0A8WIF5	Clostridium_phage	6.9e-45	95.8
WP_009889434.1\|1277244_1277811_-	hypothetical protein	A0A0A8WFF2	Clostridium_phage	3.6e-37	77.8
WP_009889431.1\|1277844_1278027_-	hypothetical protein	A3QSC3	Clostridium_virus	5.5e-24	95.0
WP_009889429.1\|1278026_1278320_-	hypothetical protein	E2ELK3	Clostridium_phage	2.2e-38	77.9
WP_009893144.1\|1278334_1279861_-	hypothetical protein	B6SBV0	Clostridium_virus	1.3e-89	60.8
WP_009888853.1\|1279877_1280903_-\|tail	phage tail protein	A3QSB7	Clostridium_virus	9.1e-140	87.8
WP_003433579.1\|1280914_1281532_-	YmfQ family protein	A0A0A8WII4	Clostridium_phage	8.8e-114	98.0
WP_009888852.1\|1281524_1282574_-\|plate	baseplate J/gp47 family protein	A0A0A8WFK0	Clostridium_phage	1.0e-186	94.8
WP_009888851.1\|1282574_1282994_-	DUF2634 domain-containing protein	A0A0A8WJV8	Clostridium_phage	1.3e-71	95.7
WP_009893142.1\|1282998_1283259_-	DUF2577 domain-containing protein	A0A0A8WJ65	Clostridium_phage	1.4e-33	86.0
WP_009893140.1\|1283272_1285165_-	cell wall hydrolase	A3QSB3	Clostridium_virus	0.0e+00	94.8
WP_009888849.1\|1285157_1285847_-	LysM peptidoglycan-binding domain-containing protein	X5J9Z8	Clostridium_phage	2.0e-119	94.8
WP_009893138.1\|1285863_1288236_-	tape measure protein	X5JAB7	Clostridium_phage	8.8e-146	41.5
WP_009888848.1\|1288301_1289069_-	DUF4428 domain-containing protein	X5JB37	Clostridium_phage	6.3e-45	44.4
WP_009888847.1\|1289206_1289734_-	DUF4352 domain-containing protein	A0A0A8WJ63	Clostridium_phage	8.7e-62	97.1
WP_009888846.1\|1290411_1290546_-	hypothetical protein	NA	NA	NA	NA
WP_009888845.1\|1290598_1291465_-	hypothetical protein	X5JAW1	Clostridium_phage	3.2e-130	80.1
WP_003429858.1\|1291583_1291772_-	hypothetical protein	X5JAJ2	Clostridium_phage	2.2e-23	96.8
WP_003429855.1\|1293108_1293270_-	hypothetical protein	A0A0A8WE04	Clostridium_phage	1.2e-14	84.3
WP_011861033.1\|1293416_1293611_-	hypothetical protein	NA	NA	NA	NA
WP_003429853.1\|1293610_1294051_-\|portal	phage portal protein	X5JAB6	Clostridium_phage	8.6e-47	63.7
WP_009888843.1\|1294122_1294950_-	hypothetical protein	A0A2R4P8H7	Staphylococcus_phage	1.8e-45	48.3
WP_009888842.1\|1295008_1295479_-\|tail	phage tail tube protein	A0A0A8WJ62	Clostridium_phage	1.3e-69	81.3
WP_009893136.1\|1295495_1296806_-	hypothetical protein	X5JAJ1	Clostridium_phage	8.1e-234	92.7
WP_009888840.1\|1296806_1296983_-	hypothetical protein	X5J9Z6	Clostridium_phage	1.1e-21	93.1
WP_009888839.1\|1296975_1297413_-	hypothetical protein	A0A0A8WJT3	Clostridium_phage	3.3e-75	95.2
WP_009888838.1\|1297761_1298568_-	hypothetical protein	F8UBL7	Clostridium_phage	2.4e-47	48.0
WP_009893135.1\|1298677_1298968_-	HK97 gp10 family phage protein	A0A0A8WFV8	Clostridium_phage	4.1e-45	96.7
WP_003433540.1\|1298967_1299315_-	hypothetical protein	X5JAV9	Clostridium_phage	1.1e-57	99.1
WP_009888836.1\|1299308_1299710_-	hypothetical protein	X5JAJ0	Clostridium_phage	8.1e-68	97.0
WP_009888835.1\|1299719_1299953_-	hypothetical protein	A0A0A8WFD0	Clostridium_phage	4.6e-31	93.5
WP_009888834.1\|1299971_1300862_-	hypothetical protein	X5J9Z5	Clostridium_phage	1.4e-165	99.3
WP_009888833.1\|1300873_1301437_-	scaffold protein	A0A0A8WFU8	Clostridium_phage	6.0e-85	93.6
WP_009888832.1\|1301504_1301753_-	hypothetical protein	NA	NA	NA	NA
WP_009893134.1\|1301754_1303290_-	hypothetical protein	X5JAI9	Clostridium_phage	2.5e-194	71.9
WP_009888831.1\|1303279_1304722_-\|portal	phage portal protein	A0A0A8WIH2	Clostridium_phage	3.0e-274	97.7
WP_009888830.1\|1304727_1305969_-\|terminase	PBSX family phage terminase large subunit	X5JAB3	Clostridium_phage	1.1e-243	98.3
WP_009888829.1\|1305958_1306651_-	helix-turn-helix domain-containing protein	A0A0A8WFS6	Clostridium_phage	7.0e-120	97.0
WP_003429834.1\|1306720_1307230_-	hypothetical protein	NA	NA	NA	NA
WP_009888827.1\|1307250_1308225_-	hypothetical protein	NA	NA	NA	NA
WP_009888825.1\|1309251_1309731_-	hypothetical protein	I2E8Y5	Clostridium_phage	4.4e-36	51.0
WP_009888823.1\|1309884_1311255_-	DEAD/DEAH box helicase	A0A1S7FYY5	Listeria_phage	8.4e-157	60.0
WP_003433522.1\|1311203_1311530_-	VRR-NUC domain-containing protein	A0A2K5B272	Erysipelothrix_phage	8.7e-20	55.4
WP_009888822.1\|1311811_1314229_-	virulence-associated protein E	A0A0A7RTG3	Clostridium_phage	0.0e+00	67.7
WP_009888821.1\|1314240_1316199_-	DNA polymerase	A0A0A7RTL3	Clostridium_phage	7.8e-265	69.1
1314642:1314659	attL	NA	NA	NA	NA
WP_003433516.1\|1316198_1316771_-	DUF2815 family protein	S5MC21	Brevibacillus_phage	8.5e-63	66.7
WP_003429822.1\|1316793_1317366_-	DNA-directed RNA polymerase sigma-70 factor	NA	NA	NA	NA
WP_009888819.1\|1317418_1317754_-	hypothetical protein	NA	NA	NA	NA
WP_009888818.1\|1317768_1318935_-	DUF2800 domain-containing protein	S5MUB5	Brevibacillus_phage	1.5e-117	55.9
WP_003433513.1\|1318946_1319384_-	hypothetical protein	NA	NA	NA	NA
WP_003429817.1\|1319454_1319604_-	hypothetical protein	A0A0A8WIF8	Clostridium_phage	4.2e-14	89.4
WP_009888815.1\|1319584_1319977_-	helix-turn-helix domain-containing protein	A0A0A8WHS2	Clostridium_phage	9.6e-58	93.0
WP_009888813.1\|1320007_1320205_-	helix-turn-helix transcriptional regulator	A0A0A8WE47	Clostridium_phage	2.9e-26	92.3
WP_003433505.1\|1320280_1320655_+	hypothetical protein	A0A1L5C299	Pseudoalteromonas_phage	2.2e-11	37.1
WP_009888812.1\|1320664_1320874_-	hypothetical protein	NA	NA	NA	NA
WP_009888810.1\|1320920_1321730_-	phage antirepressor	A0A0A8WIE3	Clostridium_phage	1.0e-146	97.4
WP_009893129.1\|1321777_1321981_-	helix-turn-helix domain-containing protein	A0A0A8WHR3	Clostridium_phage	3.7e-29	100.0
WP_009888806.1\|1322157_1322499_+	XRE family transcriptional regulator	A0A0A8WE28	Clostridium_phage	7.6e-59	100.0
WP_009893126.1\|1322510_1323059_+	helix-turn-helix domain-containing protein	A0A0A8WJ60	Clostridium_phage	2.2e-92	98.4
WP_003429804.1\|1323134_1323641_+	ImmA/IrrE family metallo-endopeptidase	A0A0A8WEK1	Clostridium_phage	1.5e-87	100.0
WP_009888801.1\|1324260_1325130_+	protein kinase	NA	NA	NA	NA
WP_009888800.1\|1325142_1325850_+	hypothetical protein	NA	NA	NA	NA
WP_003429803.1\|1325928_1327059_+\|integrase	site-specific integrase	A0A0A8WIE1	Clostridium_phage	2.9e-216	99.7
1330707:1330724	attR	NA	NA	NA	NA

DBSCAN-SWA_2

1454473 : 1463018

Pandoravirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_009893065.1\|1454473_1456264_-	DNA primase	A0A0K1LMQ9	Caulobacter_phage	5.6e-52	32.8
WP_009893063.1\|1456518_1457304_-	3-deoxy-7-phosphoheptulonate synthase	E3T537	Cafeteria_roenbergensis_virus	1.0e-13	27.9
WP_009889259.1\|1457284_1457791_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
WP_009889257.1\|1457783_1458149_-	dihydroneopterin aldolase	NA	NA	NA	NA
WP_012816129.1\|1458159_1458963_-	dihydropteroate synthase	S4W084	Pandoravirus	2.4e-23	28.6
WP_003429416.1\|1459016_1459589_-	GTP cyclohydrolase I FolE	E7DN69	Pneumococcus_phage	3.0e-44	51.6
WP_009889253.1\|1459614_1460316_-	hypothetical protein	NA	NA	NA	NA
WP_003438634.1\|1460349_1461093_-	aminodeoxychorismate lyase	NA	NA	NA	NA
WP_074014342.1\|1461082_1462441_-	aminodeoxychorismate synthase component I	S4VNU7	Pandoravirus	3.0e-37	41.2
WP_009889249.1\|1462433_1463018_-	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	4.2e-57	52.6

DBSCAN-SWA_3

1545710 : 1595223

Clostridium_phage(50.0%)

integrase,portal,tail,plate

attL 1542266:1542282|attR 1603436:1603452

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1542266:1542282	attL	NA	NA	NA	NA
WP_009889162.1\|1545710_1546109_+	helix-turn-helix domain-containing protein	A0A1L2JY18	Aeribacillus_phage	2.7e-07	29.7
WP_003428145.1\|1546325_1546547_-	hypothetical protein	NA	NA	NA	NA
WP_003428146.1\|1546566_1546776_-	helix-turn-helix transcriptional regulator	Q5YAA3	Bacillus_phage	5.9e-06	47.2
WP_003438466.1\|1547074_1547494_+	helix-turn-helix transcriptional regulator	S5MUV6	Brevibacillus_phage	5.4e-06	37.2
WP_003419674.1\|1547721_1548177_+	hypothetical protein	NA	NA	NA	NA
WP_003419670.1\|1548401_1548662_-	hypothetical protein	E2ELK7	Clostridium_phage	9.9e-35	90.6
WP_009889155.1\|1548924_1549278_-	hypothetical protein	A0A0A8WJF2	Clostridium_phage	4.2e-12	42.1
WP_009892995.1\|1549294_1554472_-	chromosome condensation regulator	A0A0A8WEY5	Clostridium_phage	8.2e-88	28.3
WP_009889153.1\|1554493_1555480_-\|tail	phage tail protein	A0A2H4J039	uncultured_Caudovirales_phage	3.4e-59	45.8
WP_009889149.1\|1555480_1556179_-	DUF2313 domain-containing protein	A0A090D815	Clostridium_phage	3.3e-48	56.9
WP_009889148.1\|1556175_1557228_-\|plate	baseplate J/gp47 family protein	A0A0A8WFP3	Clostridium_phage	9.3e-140	71.3
WP_003428161.1\|1557220_1557649_-	DUF2634 domain-containing protein	A0A0A8WJ32	Clostridium_phage	5.8e-64	82.4
WP_003438447.1\|1557648_1557975_-	DUF2577 domain-containing protein	J9QE86	Clostridium_phage	1.0e-52	94.4
WP_009889145.1\|1557990_1559520_-	cell wall XkdQ hydrolase	A0A1V0DZX6	Clostridioides_phage	1.0e-243	81.1
WP_009889143.1\|1559801_1560224_-	hypothetical protein	A0A090DBR9	Clostridium_phage	2.2e-52	70.4
WP_009889141.1\|1560223_1562677_-	hypothetical protein	A0A1V0DZX3	Clostridioides_phage	6.1e-17	61.0
WP_003419648.1\|1562676_1562844_-	hypothetical protein	NA	NA	NA	NA
WP_009889139.1\|1562870_1563317_-\|portal	phage portal protein	A0A0A7RTP2	Clostridium_phage	1.1e-12	36.4
WP_003419646.1\|1563430_1563859_-\|tail	phage tail tube protein	A0A1V0DZX1	Clostridioides_phage	2.8e-34	51.8
WP_009889137.1\|1563872_1564937_-\|portal	phage portal protein	A0A1V0DZX4	Clostridioides_phage	2.6e-97	52.8
WP_009889135.1\|1564941_1565385_-	hypothetical protein	A0A1V0DZX9	Clostridioides_phage	7.6e-19	36.7
WP_009889133.1\|1565633_1566074_-	hypothetical protein	A0A090EUN5	Clostridium_phage	4.6e-32	51.4
WP_003419641.1\|1566178_1566376_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003428185.1\|1566544_1566865_+	XRE family transcriptional regulator	A0A0A8WE28	Clostridium_phage	3.7e-23	54.5
WP_003428186.1\|1566946_1567453_+	hypothetical protein	A0A0A8WEK1	Clostridium_phage	4.0e-56	67.1
WP_009889132.1\|1567616_1568033_+	hypothetical protein	NA	NA	NA	NA
WP_009889131.1\|1568153_1568909_+	peptidylprolyl isomerase	NA	NA	NA	NA
WP_009889129.1\|1569051_1569480_-	CBS domain-containing protein	NA	NA	NA	NA
WP_003419624.1\|1569900_1570101_-	cold-shock protein	A0A1W6JNX5	Morganella_phage	2.7e-16	66.2
WP_009892989.1\|1570283_1571438_-	amidase domain-containing protein	NA	NA	NA	NA
WP_003428191.1\|1571688_1572510_+	pyridoxamine kinase	NA	NA	NA	NA
WP_009889126.1\|1572585_1573974_-	sensor histidine kinase	NA	NA	NA	NA
WP_009889124.1\|1574117_1574876_-	lantibiotic immunity ABC transporter MutG family permease subunit	NA	NA	NA	NA
WP_009889122.1\|1574877_1575594_-	lantibiotic immunity ABC transporter MutE/EpiE family permease subunit	NA	NA	NA	NA
WP_009889121.1\|1575595_1576303_-	lantibiotic protection ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	3.6e-55	48.0
WP_003428196.1\|1576419_1576956_-	lipoprotein	NA	NA	NA	NA
WP_009889118.1\|1577057_1578128_-	DUF4097 family beta strand repeat protein	NA	NA	NA	NA
WP_012816112.1\|1578120_1579179_-	DUF1700 domain-containing protein	NA	NA	NA	NA
WP_009889116.1\|1579165_1579498_-	PadR family transcriptional regulator	NA	NA	NA	NA
WP_003428201.1\|1579696_1580818_+	galactosyldiacylglycerol synthase	NA	NA	NA	NA
WP_003428202.1\|1580945_1582844_-	glutamine synthetase	NA	NA	NA	NA
WP_009889114.1\|1583158_1583935_+	exonuclease domain-containing protein	NA	NA	NA	NA
WP_003438367.1\|1584026_1584779_-	exodeoxyribonuclease III	E3T4M6	Cafeteria_roenbergensis_virus	1.9e-57	45.6
WP_009889113.1\|1584939_1585890_-	galactose-1-phosphate uridylyltransferase	NA	NA	NA	NA
WP_003438357.1\|1586274_1587471_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
WP_011861180.1\|1587582_1588923_-	6-phospho-alpha-glucosidase	NA	NA	NA	NA
WP_009892977.1\|1589061_1589814_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_009889112.1\|1589972_1591550_-	PTS maltose transporter subunit IICB	NA	NA	NA	NA
WP_003419561.1\|1591962_1592415_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_009889111.1\|1592725_1594171_-	adenylosuccinate lyase	NA	NA	NA	NA
WP_009889110.1\|1594314_1595223_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
1603436:1603452	attR	NA	NA	NA	NA

DBSCAN-SWA_4

2315730 : 2376347

Streptococcus_phage(36.36%)

transposase,protease,coat

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_009888423.1\|2315730_2316639_-\|transposase	Rpn family recombination-promoting nuclease/putative transposase	NA	NA	NA	NA
WP_003427864.1\|2317189_2317360_-	hypothetical protein	NA	NA	NA	NA
WP_003440126.1\|2317531_2317975_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_009892708.1\|2318437_2319328_-	radical SAM protein	NA	NA	NA	NA
WP_074014369.1\|2319712_2320525_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_009888421.1\|2320632_2321001_-	nuclear transport factor 2 family protein	NA	NA	NA	NA
WP_009892706.1\|2321324_2322404_-	hypothetical protein	NA	NA	NA	NA
WP_155802050.1\|2322621_2322867_-	hypothetical protein	NA	NA	NA	NA
WP_009888420.1\|2322998_2323520_-	PadR family transcriptional regulator	NA	NA	NA	NA
WP_009888419.1\|2323647_2325012_+	MATE family efflux transporter	NA	NA	NA	NA
WP_009888418.1\|2325200_2325878_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA
WP_009888417.1\|2326357_2328043_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	5.0e-26	25.1
WP_009888416.1\|2328965_2329547_-	4Fe-4S binding protein	NA	NA	NA	NA
WP_003418105.1\|2329539_2329770_-	ferredoxin	NA	NA	NA	NA
WP_009888415.1\|2331094_2331370_-	transcriptional regulator	NA	NA	NA	NA
WP_003437698.1\|2331445_2332747_-	AAA family ATPase	A0A218KST2	Xenohaliotis_phage	1.1e-20	29.3
WP_009888414.1\|2333452_2334691_-	hypothetical protein	A0A1V0E018	Clostridioides_phage	7.4e-11	33.6
WP_003437357.1\|2335139_2335397_-	transcriptional regulator	NA	NA	NA	NA
WP_003437355.1\|2335411_2335552_-	hypothetical protein	NA	NA	NA	NA
WP_003437342.1\|2335976_2336198_+	DUF1659 domain-containing protein	NA	NA	NA	NA
WP_003437662.1\|2336889_2337120_+	DUF2922 domain-containing protein	NA	NA	NA	NA
WP_003429511.1\|2337132_2337282_+	YvrJ family protein	NA	NA	NA	NA
WP_003437661.1\|2337538_2337976_+	LytTR family transcriptional regulator	NA	NA	NA	NA
WP_009888411.1\|2338232_2339126_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_009888410.1\|2339303_2340128_+	MerR family transcriptional regulator	NA	NA	NA	NA
WP_009888409.1\|2340253_2340835_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_003429517.1\|2340938_2341115_+	hypothetical protein	NA	NA	NA	NA
WP_009888408.1\|2342410_2343163_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	6.9e-28	33.3
WP_009888407.1\|2343152_2345264_+	ABC transporter permease	NA	NA	NA	NA
WP_009888406.1\|2345877_2346588_+	response regulator transcription factor	NA	NA	NA	NA
WP_009899706.1\|2347027_2348365_+	sensor histidine kinase	X5JAC0	Clostridium_phage	3.0e-10	22.9
WP_009888403.1\|2348701_2349271_-	GrpB family protein	NA	NA	NA	NA
WP_009888401.1\|2349626_2350640_-	M56 family metallopeptidase	NA	NA	NA	NA
WP_009900889.1\|2351248_2352151_-	chloride channel protein	NA	NA	NA	NA
WP_009888399.1\|2352277_2353387_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A0H3UZC2	Geobacillus_virus	6.6e-112	54.3
WP_009888396.1\|2354893_2355403_-	GrpB family protein	NA	NA	NA	NA
WP_009888395.1\|2355477_2355891_-	DUF3795 domain-containing protein	NA	NA	NA	NA
WP_012816016.1\|2356738_2356987_+	hypothetical protein	NA	NA	NA	NA
WP_009888392.1\|2357593_2357773_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_009888391.1\|2357997_2358531_-	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	7.0e-35	50.0
WP_003418062.1\|2359348_2359921_-	manganese catalase family protein	NA	NA	NA	NA
WP_009888390.1\|2359982_2360246_-\|coat	spore coat protein CotJB	NA	NA	NA	NA
WP_009888389.1\|2360245_2360467_-\|coat	spore coat associated protein CotJA	NA	NA	NA	NA
WP_009888388.1\|2360985_2361522_-	ParB-like nuclease domain-containing protein	A0A220GKT8	Streptococcus_phage	4.2e-64	70.3
WP_009888387.1\|2361539_2362853_-	DUF3440 domain-containing protein	A0A220GKF8	Streptococcus_phage	1.6e-93	41.0
WP_009888386.1\|2363188_2363629_+	DUF3788 domain-containing protein	NA	NA	NA	NA
WP_003438914.1\|2363813_2364002_-	hypothetical protein	NA	NA	NA	NA
WP_009892678.1\|2365062_2365458_+	hypothetical protein	NA	NA	NA	NA
WP_009888383.1\|2365500_2367600_+	heavy metal translocating P-type ATPase	E4ZFI9	Streptococcus_phage	2.2e-68	28.8
WP_009888382.1\|2367824_2373035_-	hypothetical protein	NA	NA	NA	NA
WP_009888381.1\|2373049_2375173_-	hypothetical protein	NA	NA	NA	NA
WP_009892676.1\|2375237_2376347_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A0H3UZC2	Geobacillus_virus	3.1e-109	53.8

DBSCAN-SWA_5

2538553 : 2545182

Paenibacillus_phage(33.33%)

transposase,integrase

attL 2532758:2532773|attR 2553830:2553845

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2532758:2532773	attL	NA	NA	NA	NA
WP_009892623.1\|2538553_2539225_+	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	1.4e-43	43.0
WP_104694834.1\|2539185_2540118_+\|transposase	IS3 family transposase	A0A0C5AEA5	Paenibacillus_phage	2.8e-79	60.7
WP_009888269.1\|2540648_2541809_-	cell wall-binding protein Cwp27	A0A2R2ZGK6	Clostridioides_phage	5.0e-70	47.9
WP_003426228.1\|2541979_2542183_-	DUF4236 domain-containing protein	A0A0A8WIL0	Clostridium_phage	1.5e-14	74.1
WP_009888268.1\|2542269_2543304_-	YHYH domain-containing protein	NA	NA	NA	NA
WP_021362188.1\|2543598_2543745_+\|integrase	tyrosine-type recombinase/integrase	A0A0A8WIE1	Clostridium_phage	1.8e-09	67.4
WP_009888265.1\|2543826_2545182_-	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	A0A2K5B251	Erysipelothrix_phage	8.8e-58	34.4
2553830:2553845	attR	NA	NA	NA	NA

DBSCAN-SWA_6

2709940 : 2726126

Synechococcus_phage(23.08%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_009888051.1\|2709940_2710609_-	lytic transglycosylase domain-containing protein	A0A0H3V0Q1	Geobacillus_virus	4.1e-24	47.7
WP_009888050.1\|2710647_2711631_-	dTDP-glucose 4,6-dehydratase	A0A291LAD7	Escherichia_phage	9.2e-81	47.9
WP_009888049.1\|2711668_2712226_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	1.3e-47	53.0
WP_009888048.1\|2712262_2713144_-	glucose-1-phosphate thymidylyltransferase RfbA	K7QKA7	Escherichia_phage	8.2e-97	61.9
WP_009888047.1\|2713252_2714125_-	dTDP-4-dehydrorhamnose reductase	H9NCE8	Sphingomonas_phage	3.8e-14	30.0
WP_009888046.1\|2714330_2718137_-	phosphoribosylformylglycinamidine synthase	A6N228	Microbacterium_phage	3.0e-31	24.1
WP_009888045.1\|2718161_2719412_-	phosphoribosylamine--glycine ligase	NA	NA	NA	NA
WP_009892582.1\|2719422_2720955_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	E3SNU8	Prochlorococcus_phage	2.3e-38	49.7
WP_003436064.1\|2720947_2721541_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	4.3e-25	40.4
WP_003425286.1\|2721534_2722611_-	phosphoribosylformylglycinamidine cyclo-ligase	R9TMC7	Synechococcus_phage	1.7e-64	42.2
WP_003425288.1\|2722604_2723972_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	2.6e-49	31.0
WP_003420966.1\|2723983_2724682_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0E3F9V5	Synechococcus_phage	1.5e-45	43.9
WP_003425290.1\|2724687_2725164_-	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	6.9e-26	45.8
WP_009888043.1\|2725613_2726126_+	nitroreductase family protein	A0A1V0E011	Clostridioides_phage	2.3e-83	87.1

DBSCAN-SWA_7

3085316 : 3097704

Streptococcus_phage(90.91%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_009892232.1\|3085316_3086210_-	conjugal transfer protein	A0A1S5SF22	Streptococcus_phage	1.6e-79	53.0
WP_009892230.1\|3086225_3087233_-	C40 family peptidase	A0A1S5SEZ8	Streptococcus_phage	6.4e-130	67.3
WP_009892229.1\|3087229_3089365_-	membrane protein	A0A1S5SF30	Streptococcus_phage	1.3e-177	58.6
WP_009892228.1\|3089364_3091797_-	ATP-binding protein	A0A1S5SF64	Streptococcus_phage	0.0e+00	76.0
WP_009892227.1\|3091783_3092173_-	conjugal transfer protein	A0A1S5SEX7	Streptococcus_phage	8.1e-49	73.8
WP_153300386.1\|3092182_3092323_-	hypothetical protein	NA	NA	NA	NA
WP_009892226.1\|3092285_3092789_-	antirestriction protein ArdA	A0A1S5SF25	Streptococcus_phage	4.4e-39	47.6
WP_009892224.1\|3092804_3093302_-	conjugal transfer protein	A0A1S5SF25	Streptococcus_phage	1.3e-27	41.2
WP_009892222.1\|3093322_3093511_-	hypothetical protein	NA	NA	NA	NA
WP_009892220.1\|3093587_3094226_-	chloramphenicol acetyltransferase CAT	G3CFL0	Escherichia_phage	7.6e-36	35.3
WP_006354966.1\|3094545_3094767_-	hypothetical protein	A0A1S5SEY0	Streptococcus_phage	1.2e-28	86.3
WP_009892216.1\|3094767_3094902_-	DUF3789 domain-containing protein	NA	NA	NA	NA
WP_009892210.1\|3094908_3096030_-	replication initiation factor domain-containing protein	A0A1S5SEX3	Streptococcus_phage	1.3e-134	62.7
WP_012816450.1\|3096309_3097704_-	cell division protein FtsK	A0A1S5SFB5	Streptococcus_phage	1.3e-178	66.8

DBSCAN-SWA_8

3272464 : 3286296

Clostridioides_phage(83.33%)

transposase,portal

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003437815.1\|3272464_3273622_+	S41 family peptidase	A0A0R6PIZ1	Moraxella_phage	8.4e-17	28.5
WP_012816433.1\|3273808_3275023_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	7.9e-50	50.8
WP_009888257.1\|3275499_3276111_+	hypothetical protein	NA	NA	NA	NA
WP_009888256.1\|3276138_3276321_+	hypothetical protein	NA	NA	NA	NA
WP_009888255.1\|3276560_3277103_+	sigma-70 family RNA polymerase sigma factor	A0A1V0DZZ1	Clostridioides_phage	3.8e-89	96.7
WP_012816432.1\|3277134_3277797_+	DUF4367 domain-containing protein	A0A1V0DZZ4	Clostridioides_phage	4.4e-87	76.2
WP_009888253.1\|3277986_3278304_+	hypothetical protein	NA	NA	NA	NA
WP_009888252.1\|3278325_3278769_+	hypothetical protein	NA	NA	NA	NA
WP_009888251.1\|3278986_3279430_+	hypothetical protein	A0A1V0DZZ2	Clostridioides_phage	4.3e-62	82.6
WP_009888248.1\|3279958_3281164_-\|portal	phage portal protein	A0A1V0DZW8	Clostridioides_phage	2.0e-210	95.0
WP_012816431.1\|3281258_3281801_-	hypothetical protein	A0A1V0DZW7	Clostridioides_phage	8.3e-92	95.0
WP_021396478.1\|3281840_3282059_-	hypothetical protein	A0A1V0DZW7	Clostridioides_phage	6.8e-37	94.4
WP_012816430.1\|3282254_3282998_-	hypothetical protein	A0A1V0DZW7	Clostridioides_phage	4.3e-131	92.3
WP_009888247.1\|3283297_3283855_-	recombinase family protein	A0A1V0E035	Clostridioides_phage	4.1e-94	97.8
WP_009888246.1\|3284049_3284238_-	hypothetical protein	A0A1V0E014	Clostridioides_phage	5.3e-22	96.8
WP_009888245.1\|3284248_3284824_-	hypothetical protein	NA	NA	NA	NA
WP_009888243.1\|3285156_3286296_-	Fic family protein	A0A1V0E025	Clostridioides_phage	4.9e-195	91.8

DBSCAN-SWA_9

4123879 : 4132832

Catovirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_009891033.1\|4123879_4124719_+	glycosyltransferase family 2 protein	A0A2P1ELT8	Moumouvirus	5.3e-05	26.3
WP_004454110.1\|4124718_4125909_+	glycerophosphotransferase	NA	NA	NA	NA
WP_003426502.1\|4125937_4126687_+	glycosyltransferase family 2 protein	A0A1V0SAH6	Catovirus	1.2e-16	38.8
WP_004454111.1\|4126708_4127617_+	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_003426498.1\|4127664_4128417_+	glycosyltransferase family 2 protein	A0A1V0SAH6	Catovirus	4.6e-16	40.5
WP_021419400.1\|4128442_4129738_+	UDP-glucose/GDP-mannose dehydrogenase family protein	A0A127AXI2	Bacillus_phage	3.7e-90	43.6
WP_003431768.1\|4129743_4130835_+	glycosyltransferase	A0A1V0SL50	Klosneuvirus	1.8e-16	26.2
WP_009891028.1\|4130918_4132832_+	polysaccharide biosynthesis protein	A0A1V0SAI8	Catovirus	1.1e-26	29.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP046327

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection