CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP046283	Salmonella enterica strain FDAARGOS_687 chromosome, complete genome	5 crisprs	DEDDh,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,cas14j,DinG,RT	19	11
NZ_CP046284	Salmonella enterica strain FDAARGOS_687 plasmid unnamed2, complete sequence	1 crisprs	NA	1	7
NZ_CP046282	Salmonella enterica strain FDAARGOS_687 plasmid unnamed1, complete sequence	0 crisprs	cas14j	0	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP046283_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046283_1

370620-370720

Orphan

Consensus_repeat	Method
GCTTCAGTGGCGAACGTCGTGAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP046283_1

>merge|NZ_CP046283|1|370620-370720|CRISPRCasFinder
GCTTCAGTGGCGAACGTCGTGAAGGCGGTCGTAATTTCAGCGGCGAACGTCGTGAAGGTGGTCGTGGTGATGGTCGTCGCTTCAGCGGCGAACGTCGTGAA

>NZ_CP046283|1|1|370620-370720|CRISPRCasFinder
GCTTCAGTGGCGAACGTCGTGAA	GGCGGTCGTAATTTCAGCGGCGAACGTCGTGAAGGTGGTCGTGGTGATGGTCGTC
GCTTCAGCGGCGAACGTCGTGAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046283.1\|WP_000421309.1\|375696_376692_-\|U32-family-peptidase	unknown	unknown	gnl\|CDD\|223896
NZ_CP046283.1\|WP_000105461.1\|358669_359122_+\|ribosome-maturation-factor-RimP	unknown	unknown	gnl\|CDD\|234627
NZ_CP046283.1\|WP_000059465.1\|365071_365341_+\|30S-ribosomal-protein-S15	unknown	unknown	gnl\|CDD\|180170
NZ_CP046283.1\|WP_010723222.1\|368817_368898_+\|protein-YrbN	unknown	unknown	gnl\|CDD\|380282
NZ_CP046283.1\|WP_001294027.1\|372238_372769_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046283.1\|WP_000207654.1\|356698_358042_-\|argininosuccinate-synthase	unknown	unknown	gnl\|CDD\|235434
NZ_CP046283.1\|WP_000884721.1\|376908_377433_+\|SCP2-domain-containing-protein	unknown	unknown	gnl\|CDD\|225696
NZ_CP046283.1\|WP_000802069.1\|367827_368712_+\|lipoprotein-NlpI	unknown	unknown	gnl\|CDD\|236875
NZ_CP046283.1\|WP_000380404.1\|378271_378715_+\|YhbP-family-protein	unknown	unknown	gnl\|CDD\|235127
NZ_CP046283.1\|WP_001031038.1\|359149_360652_+\|transcription-termination/antitermination-protein-NusA	unknown	unknown	gnl\|CDD\|236410
NZ_CP046283.1\|WP_001040199.1\|363575_363977_+\|30S-ribosome-binding-factor-RbfA	unknown	unknown	gnl\|CDD\|234787
NZ_CP046283.1\|WP_014343909.1\|365582_367718_+\|polyribonucleotide-nucleotidyltransferase	unknown	unknown	gnl\|CDD\|236995
NZ_CP046283.1\|WP_000532745.1\|372927_373647_+\|murein-L,D-transpeptidase	unknown	unknown	gnl\|CDD\|225577
NZ_CP046283.1\|WP_000133064.1\|360676_363355_+\|translation-initiation-factor-IF-2	unknown	unknown	gnl\|CDD\|235401
NZ_CP046283.1\|WP_000224386.1\|370933_372178_+\|tryptophan-permease	unknown	unknown	gnl\|CDD\|182492
NZ_CP046283.1\|WP_000130437.1\|373624_374632_-\|LLM-class-flavin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|182505
NZ_CP046283.1\|WP_000908562.1\|377426_377930_+\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|225695
NZ_CP046283.1\|WP_014343907.1\|374809_375706_-\|U32-family-peptidase	unknown	unknown	gnl\|CDD\|237968
NZ_CP046283.1\|WP_000089674.1\|363976_364921_+\|tRNA-pseudouridine(55)-synthase-TruB	unknown	unknown	gnl\|CDD\|235333
NZ_CP046283.1\|WP_000928379.1\|377916_378234_-\|GIY-YIG-nuclease-family-protein	unknown	unknown	gnl\|CDD\|178979

Protein	Function_ID	Function_description	E-value
NZ_CP046283.1\|WP_000421309.1\|375696_376692_-\|U32-family-peptidase	gnl\|CDD\|223896	COG0826, COG0826, Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones].	3.77757e-116
NZ_CP046283.1\|WP_000105461.1\|358669_359122_+\|ribosome-maturation-factor-RimP	gnl\|CDD\|234627	PRK00092, PRK00092, ribosome maturation protein RimP; Reviewed.	4.39218e-79
NZ_CP046283.1\|WP_000059465.1\|365071_365341_+\|30S-ribosomal-protein-S15	gnl\|CDD\|180170	PRK05626, rpsO, 30S ribosomal protein S15; Reviewed.	7.70279e-54
NZ_CP046283.1\|WP_010723222.1\|368817_368898_+\|protein-YrbN	gnl\|CDD\|380282	NF033440, small_YrbN, protein YrbN. YrbN, a small protein of only 26 amino acids, is found in at least these genera: Escherichia, Salmonella, Enterobacter, Klebsiella, and Yersinia. It is known to be expressed in E. coli.	1.66225e-08
NZ_CP046283.1\|WP_000207654.1\|356698_358042_-\|argininosuccinate-synthase	gnl\|CDD\|235434	PRK05370, PRK05370, argininosuccinate synthase; Validated.	0
NZ_CP046283.1\|WP_000884721.1\|376908_377433_+\|SCP2-domain-containing-protein	gnl\|CDD\|225696	COG3154, COG3154, Putative lipid carrier protein [Lipid metabolism].	1.82299e-84
NZ_CP046283.1\|WP_000802069.1\|367827_368712_+\|lipoprotein-NlpI	gnl\|CDD\|236875	PRK11189, PRK11189, lipoprotein NlpI; Provisional.	0
NZ_CP046283.1\|WP_000380404.1\|378271_378715_+\|YhbP-family-protein	gnl\|CDD\|235127	PRK03467, PRK03467, hypothetical protein; Provisional.	1.36854e-99
NZ_CP046283.1\|WP_001031038.1\|359149_360652_+\|transcription-termination/antitermination-protein-NusA	gnl\|CDD\|236410	PRK09202, nusA, transcription elongation factor NusA; Validated.	0
NZ_CP046283.1\|WP_001040199.1\|363575_363977_+\|30S-ribosome-binding-factor-RbfA	gnl\|CDD\|234787	PRK00521, rbfA, 30S ribosome-binding factor RbfA.	9.9646e-53
NZ_CP046283.1\|WP_014343909.1\|365582_367718_+\|polyribonucleotide-nucleotidyltransferase	gnl\|CDD\|236995	PRK11824, PRK11824, polynucleotide phosphorylase/polyadenylase; Provisional.	0
NZ_CP046283.1\|WP_000532745.1\|372927_373647_+\|murein-L,D-transpeptidase	gnl\|CDD\|225577	COG3034, COG3034, Uncharacterized protein conserved in bacteria [Function unknown].	1.17265e-108
NZ_CP046283.1\|WP_000133064.1\|360676_363355_+\|translation-initiation-factor-IF-2	gnl\|CDD\|235401	PRK05306, infB, translation initiation factor IF-2; Validated.	0
NZ_CP046283.1\|WP_000224386.1\|370933_372178_+\|tryptophan-permease	gnl\|CDD\|182492	PRK10483, PRK10483, tryptophan permease; Provisional.	0
NZ_CP046283.1\|WP_000130437.1\|373624_374632_-\|LLM-class-flavin-dependent-oxidoreductase	gnl\|CDD\|182505	PRK10508, PRK10508, luciferase-like monooxygenase.	0
NZ_CP046283.1\|WP_000908562.1\|377426_377930_+\|N-acetyltransferase	gnl\|CDD\|225695	COG3153, COG3153, Predicted acetyltransferase [General function prediction only].	7.2703e-63
NZ_CP046283.1\|WP_014343907.1\|374809_375706_-\|U32-family-peptidase	gnl\|CDD\|237968	PRK15447, PRK15447, putative protease; Provisional.	0
NZ_CP046283.1\|WP_000089674.1\|363976_364921_+\|tRNA-pseudouridine(55)-synthase-TruB	gnl\|CDD\|235333	PRK05033, truB, tRNA pseudouridine synthase B; Provisional.	0
NZ_CP046283.1\|WP_000928379.1\|377916_378234_-\|GIY-YIG-nuclease-family-protein	gnl\|CDD\|178979	PRK00329, PRK00329, GIY-YIG nuclease superfamily protein; Validated.	4.3214e-44

>NZ_CP046283.1|WP_010723222.1|368817_368898_+|protein-YrbN
MKIADQFHDELCRLAAINFEAHVLHG
>NZ_CP046283.1|WP_000802069.1|367827_368712_+|lipoprotein-NlpI
MKPFLRWCFVATALTLAGCSNSAWRKSEVLAVPLQPTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPYRSLWLYLVEQKLNEKQAKEALKARFEKSDKEQWGWNIVEFYLGDISEATLMERLKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSATALFKLAVANNVHNFVEHRYALLELSLLGQDQDDLAESDQQ
>NZ_CP046283.1|WP_014343909.1|365582_367718_+|polyribonucleotide-nucleotidyltransferase
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLTVNYQERTYAAGRIPGSFFRREGRPSEGETLIARLIDRPVRPLFPEGFVNEVQVIATVVSVNPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTQDELKESKLDLVAAGTEAAVLMVESEAELLSEDTMLGAVVFGHEQQQVVIQAINDLVKEAGKPRWDWQPEAVNDALNARVAALAESRLSDAYRITDKQERYAQVDVIKSETIEQLIAEDETLDANELGEILHAIEKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTARDAQVLDELMGERTDSFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPDMDKFPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGDNYVVLSDILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQAINAPRGDISEFAPRIHTIKISTDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAATDGEKAKYAIRRIEEITAEIEVGRIYNGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVEKVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEATEQSQPAAAPEAPASEQAE
>NZ_CP046283.1|WP_000059465.1|365071_365341_+|30S-ribosomal-protein-S15
MSLSTEATAKIVSEFGRDANDTGSTDVQVALLTAQINHLQGHFAEHKKDHHSRRGLLRMVSQRRKLLDYLKRKDVARYTALIERLGLRR
>NZ_CP046283.1|WP_000089674.1|363976_364921_+|tRNA-pseudouridine(55)-synthase-TruB
MSRPRRRGRDIHGVLLLDKPQGMSSNDVLQKVKRIYNANRAGHTGALDPLATGMLPICLGEATKFSQYLLDSDKRYRVIARLGQRTDTSDADGQIVQERPVTFSAEQLASALETFRGDIEQIPSMYSALKYQGKKLYEYARQGIEVPREARPITVYELLFIRHEGNELELEVHCSKGTYIRTIIDDLGEKLGCGAHVTYLRRLTVSKYPVDRMVTLEHLQTLVAQAEQQGVPAAQLLDPLLMPMDSPASDYPVVNLPLTSSVYFKNGNPVRTTGAPLKGLVRVTEGEDDKFIGMGEIDDEGRVAPRRLVVEYPA
>NZ_CP046283.1|WP_001040199.1|363575_363977_+|30S-ribosome-binding-factor-RbfA
MAKEFGRPQRVAQEMQKEIAIILQREIKDPRLGMMTTVSGVEMSRDLAYAKVFVTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTNVVKHDEERRVNPDDSKED
>NZ_CP046283.1|WP_000133064.1|360676_363355_+|translation-initiation-factor-IF-2
MTDVTLKALAAERQVSVDRLVQQFADAGIRKSADDSVSAQEKQTLLAHLNREAVSGPDKLTLQRKTRSTLNIPGTGGKSKSVQIEVRKKRTFVKRDPQEAERLAAEEQAQREAEEQARREAEEQAKREAQQKAEREAAEQAKREAAEKAKREAAEKDKVSNQQTDDMTKTAQAEKARRENEAAELKRKAEEEARRKLEEEARRVAEEARRMAEENKWTATPEPVEDTSDYHVTTSQHARQAEDENDREVEGGRGRGRNAKAARPAKKGKHAESKADREEARAAVRGGKGGKRKGSSLQQGFQKPAQAVNRDVVIGETITVGELANKMAVKGSQVIKAMMKLGAMATINQVIDQETAQLVAEEMGHKVILRRENELEEAVMSDRDTGAAAEPRAPVVTIMGHVDHGKTSLLDYIRSTKVASGEAGGITQHIGAYHVETDNGMITFLDTPGHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAGVPVVVAVNKIDKPEADPDRVKNELSQYGILPEEWGGESQFVHVSAKAGTGIDELLDAILLQAEVLELKAVRKGMASGAVIESFLDKGRGPVATVLVREGTLHKGDIVLCGFEYGRVRAMRNELGQEVLEAGPSIPVEILGLSGVPAAGDEVTVVRDEKKAREVALYRQGKFREVKLARQQKSKLENMFANMTEGEVHEVNIVLKADVQGSVEAISDSLLKLSTDEVKVKIIGSGVGGITETDATLAAASNAILVGFNVRADASARKVIESESLDLRYYSVIYNLIDEVKAAMSGMLSPELKQQIIGLAEVRDVFKSPKFGAIAGCMVTEGTIKRHNPIRVLRDNVVIYEGELESLRRFKDDVNEVRNGMECGIGVKNYNDVRVGDMIEVFEIIEIQRTIA
>NZ_CP046283.1|WP_001031038.1|359149_360652_+|transcription-termination/antitermination-protein-NusA
MNKEILAVVEAVSNEKALPREKIFEALESALATATKKKYEQEIDVRVEIDRKSGDFDTFRRWLIVEEVTMPTKEITLEAARFEDESLNVGDYVEDQIESVTFDRITTQTAKQVIVQKVREAERAMVVDQFRDQEGEIVTGVVKKVNRDNISLEIKSEGMAGNAEAVILREDMLPRENFRPGDRIRGVLYAVRPEARGAQLFVTRSKPEMLIELFRIEVPEIGEEVIEIKAAARDPGSRAKIAVKTNDKRIDPVGACVGMRGARVQAVSTELGGERIDIVLWDDNPAQFVINAMAPADVASIVVDEDKHTMDIAVEAGNLAQAIGRNGQNVRLASQLSGWELNVMTVDDLQAKHQAEAHAAIEIFTKYLDIDEEFATVLVEEGFSTLEELAYVPMKELLEIDGLDEPTVEALRERAKNALATLAQDQEASLGDNKPADDLLNLEGLDRDMAFKLAARGVCTLEDLADQGIDDLADIEGLTDEKAGELIMAARNICWFGDEA
>NZ_CP046283.1|WP_000105461.1|358669_359122_+|ribosome-maturation-factor-RimP
MSTLEQKLTEMITAPVEALGYELVGIEFIRGRTSTLRIYIDSEDGINVDDCADVSHQVSAVLDVEDPISVAYNLEVSSPGLDRPMFTADHYARFQGEEVALVLRMAVQNRRKWQGIIKAVDGEMITVTVEGKDEVFALSNIQKANLVPHF
>NZ_CP046283.1|WP_000207654.1|356698_358042_-|argininosuccinate-synthase
MTTILKHLPAGQRIGIAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYDAIPRRAMEYGAENARLIDCRKQLVAEGIAAIQCGAFHNTTGGLTYFNTTPLGRAVTGTMLVAAMKEDGVNIWGDGSTYKGNDIERFYRYGLLTNAELQIYKPWLDTDFIDELGGRHEMSEFMIACGFDYKMSVEKAYSTDSNMLGATHEAKDLEFLNSSVKIVNPIMGVKFWDESVKIPAEVVTVRFEQGHPVALNGKTFSDDVEMMLEANRIGGRHGLGMSDQIENRIIEAKSRGIYEAPGMALLHIAYERLLTGIHNEDTIEQYHSHGRQLGKLLYQGRWFDSQALMLRDGLQRWVASQITGEVTLELRRGNDYSILNTVSDNLTYKAERLTMEKGESVFSPDDRIGQLTMRNLDITDTREKLFGYAKAGLLTASSATGLPQVENLENKGK
>NZ_CP046283.1|WP_000224386.1|370933_372178_+|tryptophan-permease
MATLTTTQTSPSLLGGVVIIGGTIIGAGMFSLPVVMSGAWFFWSMAALVFTWFCMLHSGLMILEANLNYRIGSSFDTITKDLLGKGWNVVNGISIAFVLYILTYAYISASGSILHHTFAEMSLNVPARAAGFAFALLVAFVVWLSTKAVSRMTAIVLGAKVITFFLTFGSLLGHVQPATLFNVAESHASYTPYLLMTLPFCLASFGYHGNVPSLMKYYGKDPRTIVKCLIYGTLLALALYSVWLLGTMGNIPRPEFIGIAQKGGNIDVLVQALSGVLNSRSLDLLLVVFSNFAVASSFLGVTLGLFDYLADLFGFDDSAMGRFKTALLTFLPPMIGGLLYPNGFLYAIGYAGLAATIWAAIVPALLARKSRERFGSPKFRVWGGKPMIVLILLFGVGNALVHILSSFNLLPVYQ
>NZ_CP046283.1|WP_001294027.1|372238_372769_-|hypothetical-protein
MSEPASFFLHAHITESNLKKFFHSPATNIKDYDDWLPWFTEEQRLYGDPAKMLNNLATCNSGESEKNIYAEHINFNKETQIVTMDHIFLSESYEIFMPLMACVRGIEKFITPGENNFALIYYYWWGSEIAIALEFDANGSRITANPKAENLTIADAFFDEHGEALAEELYNKQGFI
>NZ_CP046283.1|WP_000532745.1|372927_373647_+|murein-L,D-transpeptidase
MGRKGLLAIVLLSLFIAFILKFFWLTPYDEDVYLPVEKPVASSLKIIHPGDQLFIRILKAEDKLELWASANNKPYKLYKTWTICAWSGGLGPKHKQGDGKSPEGFYATNKGLLNPNSRYHLAFNIGYPNAYDRANGYTGDFIMVHGNCVSAGCYAMTDAGIEEIYQLVAQALNSGQKSVPVHIFPFTMNDENMRQAQAWPEYNFWRMLKPGYDYFEKNRRLPTITVENRRYKISPTTLP
>NZ_CP046283.1|WP_000130437.1|373624_374632_-|LLM-class-flavin-dependent-oxidoreductase
MTDKTIPFSVLDLAPIPEGSSAKEAFTHSLDLARLAEKRGYHRYWLAEHHNMTGIASAATSVLIGYLAANTTTLHLGSGGVMLPNHSPLVIAEQFGTLNTLYPGRIDLGLGRAPGSDQPTMRALRRHMSGDIDNFPRDVAELVDWFDARDPNPHVRPVPGYGEQIPVWLLGSSLYSAQLAAQLGLPFAFASHFAPDMLFQALHLYRTQFKPSARLEKPYAMVCINIIAADSNRDAEFLFTSMQQAFVKLRRGETGQLPPPIENMETFRSPSEQYGVQQALSMSLVGDKAKVRHGLESILRETQADEIMVNGQIFDHQARLHSFDLAMDVKEELLG
>NZ_CP046283.1|WP_014343907.1|374809_375706_-|U32-family-peptidase
MAVRGAMKYSLGPVLYYWPKETLEDFYQQAAKSSADVIYLGEAVCSKRRATKVGDWLEMAKSLAASGKQVVLSTLALVQASSELSELKRYVDNGDFLLEASDLGVVNLCAERKLPFVAGHALNCYNAVTLRRLLKEGMVRWCMPVELSRDWLVNLLNQCDELGIRNQFEVEVLSYGHLPLAYSARCFTARSEDRPKDECETCCIKYPNGRDVLSQENQQVFVLNGIQTMSGYVYNLGNELTSMQGLVDIVRLSPLGTETFAMLDAFRANENGGAPLPLAAHSDCNGYWKRLAGLELQA
>NZ_CP046283.1|WP_000421309.1|375696_376692_-|U32-family-peptidase
MELLCPAGNLPALKAAIENGADAVYIGLKDDTNARHFAGLNFTEKKLQEAVSFVHQHRRKLHIAINTFAHPDGYARWQRAVDMAAQLGADALILADLAMLEYAAERYPHIERHVSVQASATNEEAIRFYHRNFDVHRVVLPRVLSIHQVKQLARVTPVPLEVFAFGSLCIMAEGRCYLSSYLTGESPNTVGACSPARFVRWQQTPQGLESRLNDVLIDRYQDGENAGYPTLCKGRYLVDGERYHALEEPTSLNTLELLPELMAANIASVKIEGRQRSPAYVSQVAKVWRQAIDRCKAAPQNFVPQRDWMETLGAMSEGTQTTLGAYHRKWQ
>NZ_CP046283.1|WP_000884721.1|376908_377433_+|SCP2-domain-containing-protein
MLDKLRSRLVHAGPSLMSVPVKLTPFALKRQVLEQVLSWQFRQALADGELEFLEGRWLSIHVRDIDLKWYTTVENEKLIVSQQADADVSFSADASDLLMIAARKQDPDTLFFQRRLVIEGDTELGLYVKNLMDAIELEQMPKALRVMLLQLADFVEAGMKNSPETKQTSVGEPC
>NZ_CP046283.1|WP_000908562.1|377426_377930_+|N-acetyltransferase
MLIRVEIPIDAPGIDALLRRSFESDAEAKLVHDLREDGFLTLGLVATDDEGQVVGYVAFSPVDVQGEDLQWVGMAPLAVDEKYRGQGLARQLVYEGLDSLNEFGYAAVVTLGDPALYSRFGFELAAHYDLHCRWPGTESAFQVHRLAEDALEGVTGLVEYHDHFNRF
>NZ_CP046283.1|WP_000928379.1|377916_378234_-|GIY-YIG-nuclease-family-protein
MLMATMTPWYLYLIRTADNALYTGITTDVARRYRQHQTGKGAKALRGKGELTLAFAAQVGDRSLALRIEYRIKQLTKRQKERLVTEREAFEALLSSLQTPVLKND
>NZ_CP046283.1|WP_000380404.1|378271_378715_+|YhbP-family-protein
MDTLTAIGRWLAKQHVVTWCVHHEGELWCANAFYLFDAQNVALYLLTDDKTRHAQMSGACAPVAGTVNGQPKTVARIRGVQFKGEIRRLEGQESDAARKAYLRRFPVARVLPAPVWEIRLDEIKFTDNTLGFGKKLHWLRDSRAQQA

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Crispr_ID: NZ_CP046283_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046283_2

751005-752133

TypeI-E

I-E

Consensus_repeat	Method
TCGTGTTCCCCGCGCCAGCGGGGATAAACCGTT	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR

18 spacers

cas3,cas8e,cse2gr11,cas7

The CRISPR arrays of NZ_CP046283_2

>merge|NZ_CP046283|2|751005-752133|PILER-CR,CRISPRCasFinder,CRT,PILER-CR
TGTGTTCCCCGCGCCAGCGGGGATAAACCGTTATCCCAATATATTTCGCTATCAGTTACATCGTGTTCCCCGCGCCAGCGGGGATAAACCGGCTCATTAAATAACTATATAACCCCCGGACTCGTGTTCCCCGCGCCAGCGGGGATAAACCGTTCCAGAACCGTTTGACTTACTGTGGCCATTAGTGTTCCCCGCGCCAGCGGGGATAAACCGGGCTTTGGTGAAGATTTCTGATTTGGTCATTTGTGTTCCCCGCGCCAGCGGGGATAAACCGGATCGGGTGGTGCCGGTGGGCCATGTGGCGCTGTGTTCCCCGCGCCAGCGGGGATAAACCGGCAGCGGTTGAGTAACTCCTCGTCCACGTCGAGTGTTCCCCGCGCCAGCGGGGATAAACCGCTCCAGCGCTCGAATTTATTTGAGGCCACCACGTGTTCCCCGCGCCAGCGGGGATAAACCGTTTTGATACGTAGTATTCATTACGCCTCCTAGGTGTTCCCCGCGCCAGCGGGGATAAACCGGCGAGGTCAATAAAAAATGGTGTGGCTTTACCGTGTTCCCCGCGCCAGCGGGGATAAACCGGTGAGTTCGGTTTTAATTTCGTCGCTAAGCTGCGTGTTCCCCGCGCCAGCGGGGATAAGCCGCGTCACTTTCTGACATTTTATTCAGTTCGTTAGTGTTCCCCGTGCCAGCGGGGATAAACCGTCATTTCTGGACGGGGCTGTGTGACGAATACGGTGTTCCCCGCGCCAGCGGGGATAAACCGTGTCCAATTAACCCAAACTTTGCGCGCTTAATATGTTCCCCGCGCTAGCGGGGATAAACCGGGATATGTGAAGTTCAGGTAGCCCATTACGCAGTGTTCCCCGCGCCAGCGGGGATAAACCGTTGATCGAGAGTGCGAAGAGGCAGAACGGGCAGTGTTCCCCGCGCCAGCGGGGATAAACCGCAGGTTATGCGCAAAAATTAATTCATATTATAGTGTTCCCCGCGCCAGCAGGGATAAACCGGACGAGTTCTGGAAATGGTTAGCTGATAAAGAGTGTTCCCCGCGCCAGCGGGGATAAACCGCGTTCATCGGCAGCGTCACGCAATATGAAGATGTGTTCCCCGCGCCAACAAGGATAGCCGT

>NZ_CP046283|2|1|751005-751158|PILER-CR
TGTGTTCCCCGCGCCAGCGGGGATAAACCGTTA	TCCCAATATATTTCGCTATCAGTTACAT
CGTGTTCCCCGCGCCAGCGGGGATAAACCGGCT	CATTAAATAACTATATAACCCCCGGACT
CGTGTTCCCCGCGCCAGCGGGGATAAACCGTTCCAGAACCGTTTGACTTACTGTGGCCATTAGTGTTCCCCGCGCCAGCGGGGATAAACCGGGCTTTGGTGAAGATTTCTGATTTGGTCATTTGTGTTCCCCGCGCCAGCGGGGATAAACCG	GATCGGGTGGTGCCGGTGGGCCATGTGGCGCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAGCGGTTGAGTAACTCCTCGTCCACGTCGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTCCAGCGCTCGAATTTATTTGAGGCCACCAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTTTGATACGTAGTATTCATTACGCCTCCTAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGAGGTCAATAAAAAATGGTGTGGCTTTACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGAGTTCGGTTTTAATTTCGTCGCTAAGCTGC
GTGTTCCCCGCGCCAGCGGGGATAAGCCG	CGTCACTTTCTGACATTTTATTCAGTTCGTTA
GTGTTCCCCGTGCCAGCGGGGATAAACCG	TCATTTCTGGACGGGGCTGTGTGACGAATACG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGTCCAATTAACCCAAACTTTGCGCGCTTAAT
ATGTTCCCCGCGCTAGCGGGGATAAACCG	GGATATGTGAAGTTCAGGTAGCCCATTACGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGATCGAGAGTGCGAAGAGGCAGAACGGGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGGTTATGCGCAAAAATTAATTCATATTATA
GTGTTCCCCGCGCCAGCAGGGATAAACCG	GACGAGTTCTGGAAATGGTTAGCTGATAAAGA


>NZ_CP046283|2|2|751006-752133|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTATCCCAATATATTTCGCTATCAGTTACATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCTCATTAAATAACTATATAACCCCCGGACTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTCCAGAACCGTTTGACTTACTGTGGCCATTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCTTTGGTGAAGATTTCTGATTTGGTCATTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GATCGGGTGGTGCCGGTGGGCCATGTGGCGCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAGCGGTTGAGTAACTCCTCGTCCACGTCGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTCCAGCGCTCGAATTTATTTGAGGCCACCAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTTTGATACGTAGTATTCATTACGCCTCCTAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGAGGTCAATAAAAAATGGTGTGGCTTTACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGAGTTCGGTTTTAATTTCGTCGCTAAGCTGC
GTGTTCCCCGCGCCAGCGGGGATAAGCCG	CGTCACTTTCTGACATTTTATTCAGTTCGTTA
GTGTTCCCCGTGCCAGCGGGGATAAACCG	TCATTTCTGGACGGGGCTGTGTGACGAATACG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGTCCAATTAACCCAAACTTTGCGCGCTTAAT
ATGTTCCCCGCGCTAGCGGGGATAAACCG	GGATATGTGAAGTTCAGGTAGCCCATTACGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGATCGAGAGTGCGAAGAGGCAGAACGGGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGGTTATGCGCAAAAATTAATTCATATTATA
GTGTTCCCCGCGCCAGCAGGGATAAACCG	GACGAGTTCTGGAAATGGTTAGCTGATAAAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTCATCGGCAGCGTCACGCAATATGAAGAT
GTGTTCCCCGCGCCAACAAGGATAGCCGT

>NZ_CP046283|2|1|751006-752133|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTATCCCAATATATTTCGCTATCAGTTACATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCTCATTAAATAACTATATAACCCCCGGACTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTCCAGAACCGTTTGACTTACTGTGGCCATTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGCTTTGGTGAAGATTTCTGATTTGGTCATTT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GATCGGGTGGTGCCGGTGGGCCATGTGGCGCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAGCGGTTGAGTAACTCCTCGTCCACGTCGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTCCAGCGCTCGAATTTATTTGAGGCCACCAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTTTGATACGTAGTATTCATTACGCCTCCTAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGAGGTCAATAAAAAATGGTGTGGCTTTACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGAGTTCGGTTTTAATTTCGTCGCTAAGCTGC
GTGTTCCCCGCGCCAGCGGGGATAAGCCG	CGTCACTTTCTGACATTTTATTCAGTTCGTTA
GTGTTCCCCGTGCCAGCGGGGATAAACCG	TCATTTCTGGACGGGGCTGTGTGACGAATACG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGTCCAATTAACCCAAACTTTGCGCGCTTAAT
ATGTTCCCCGCGCTAGCGGGGATAAACCG	GGATATGTGAAGTTCAGGTAGCCCATTACGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGATCGAGAGTGCGAAGAGGCAGAACGGGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGGTTATGCGCAAAAATTAATTCATATTATA
GTGTTCCCCGCGCCAGCAGGGATAAACCG	GACGAGTTCTGGAAATGGTTAGCTGATAAAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTCATCGGCAGCGTCACGCAATATGAAGAT
GTGTTCCCCGCGCCAACAAGGATAGCCGT

>NZ_CP046283|2|2|751250-752072|PILER-CR
	TCCCAATATATTTCGCTATCAGTTACAT
CGTGTTCCCCGCGCCAGCGGGGATAAACCGGCT	CATTAAATAACTATATAACCCCCGGACT
CGTGTTCCCCGCGCCAGCGGGGATAAACCGTTCCAGAACCGTTTGACTTACTGTGGCCATTAGTGTTCCCCGCGCCAGCGGGGATAAACCGGGCTTTGGTGAAGATTTCTGATTTGGTCATTTGTGTTCCCCGCGCCAGCGGGGATAAACCG	GATCGGGTGGTGCCGGTGGGCCATGTGGCGCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAGCGGTTGAGTAACTCCTCGTCCACGTCGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTCCAGCGCTCGAATTTATTTGAGGCCACCAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTTTGATACGTAGTATTCATTACGCCTCCTAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGAGGTCAATAAAAAATGGTGTGGCTTTACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGAGTTCGGTTTTAATTTCGTCGCTAAGCTGC
GTGTTCCCCGCGCCAGCGGGGATAAGCCG	CGTCACTTTCTGACATTTTATTCAGTTCGTTA
GTGTTCCCCGTGCCAGCGGGGATAAACCG	TCATTTCTGGACGGGGCTGTGTGACGAATACG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGTCCAATTAACCCAAACTTTGCGCGCTTAAT
ATGTTCCCCGCGCTAGCGGGGATAAACCG	GGATATGTGAAGTTCAGGTAGCCCATTACGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTGATCGAGAGTGCGAAGAGGCAGAACGGGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAGGTTATGCGCAAAAATTAATTCATATTATA
GTGTTCCCCGCGCCAGCAGGGATAAACCG	GACGAGTTCTGGAAATGGTTAGCTGATAAAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046283.1\|WP_000080404.1\|757488_758223_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP046283.1\|WP_000117946.1\|763936_764497_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP046283.1\|WP_000706494.1\|736804_737947_+\|glycerate-kinase	unknown	unknown	gnl\|CDD\|224840
NZ_CP046283.1\|WP_000480218.1\|744469_744826_+\|type-II-toxin-antitoxin-system-ParD-family-antitoxin	unknown	unknown	gnl\|CDD\|226136
NZ_CP046283.1\|WP_000210863.1\|746883_748521_+\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_CP046283.1\|WP_000226838.1\|742151_744386_+\|GTP-diphosphokinase	unknown	unknown	gnl\|CDD\|182797
NZ_CP046283.1\|WP_001208013.1\|752230_753028_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|224158
NZ_CP046283.1\|WP_000210449.1\|745855_746656_+\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NZ_CP046283.1\|WP_000046849.1\|740804_742100_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl\|CDD\|237291
NZ_CP046283.1\|WP_000108313.1\|753115_753478_-\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264
NZ_CP046283.1\|WP_000368584.1\|762383_763940_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_CP046283.1\|WP_000206415.1\|764510_765569_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP046283.1\|WP_000186400.1\|737990_740747_-\|two-component-sensor-histidine-kinase-BarA	unknown	unknown	gnl\|CDD\|236848
NZ_CP046283.1\|WP_000036734.1\|748603_749902_+\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_CP046283.1\|WP_001290660.1\|755700_757413_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
NZ_CP046283.1\|WP_001145543.1\|758310_759264_-\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
NZ_CP046283.1\|WP_000029738.1\|759708_762372_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP046283.1\|WP_000210927.1\|753901_755701_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|182862
NZ_CP046283.1\|WP_001532579.1\|744791_745088_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|226194
NZ_CP046283.1\|WP_001199961.1\|750037_750709_+\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126

Protein	Function_ID	Function_description	E-value
NZ_CP046283.1\|WP_000080404.1\|757488_758223_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	2.40487e-139
NZ_CP046283.1\|WP_000117946.1\|763936_764497_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	8.53741e-34
NZ_CP046283.1\|WP_000706494.1\|736804_737947_+\|glycerate-kinase	gnl\|CDD\|224840	COG1929, COG1929, Glycerate kinase [Carbohydrate transport and metabolism].	0
NZ_CP046283.1\|WP_000480218.1\|744469_744826_+\|type-II-toxin-antitoxin-system-ParD-family-antitoxin	gnl\|CDD\|226136	COG3609, COG3609, Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain [Transcription].	6.12601e-20
NZ_CP046283.1\|WP_000210863.1\|746883_748521_+\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP046283.1\|WP_000226838.1\|742151_744386_+\|GTP-diphosphokinase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	0
NZ_CP046283.1\|WP_001208013.1\|752230_753028_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|224158	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only].	8.44116e-102
NZ_CP046283.1\|WP_000210449.1\|745855_746656_+\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	8.52469e-158
NZ_CP046283.1\|WP_000046849.1\|740804_742100_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl\|CDD\|237291	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD.	0
NZ_CP046283.1\|WP_000108313.1\|753115_753478_-\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	2.78454e-58
NZ_CP046283.1\|WP_000368584.1\|762383_763940_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
NZ_CP046283.1\|WP_000206415.1\|764510_765569_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	2.67517e-131
NZ_CP046283.1\|WP_000186400.1\|737990_740747_-\|two-component-sensor-histidine-kinase-BarA	gnl\|CDD\|236848	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional.	0
NZ_CP046283.1\|WP_000036734.1\|748603_749902_+\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_CP046283.1\|WP_001290660.1\|755700_757413_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
NZ_CP046283.1\|WP_001145543.1\|758310_759264_-\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
NZ_CP046283.1\|WP_000029738.1\|759708_762372_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	0
NZ_CP046283.1\|WP_000210927.1\|753901_755701_+\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
NZ_CP046283.1\|WP_001532579.1\|744791_745088_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|226194	COG3668, ParE, Plasmid stabilization system protein [General function prediction only].	1.63617e-13
NZ_CP046283.1\|WP_001199961.1\|750037_750709_+\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	1.43874e-155

>NZ_CP046283.1|WP_001199961.1|750037_750709_+|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLSDREVSLFSILAKTKESDKWGAASSEDLLAVINRQGYTARHVVITGGEPCIHDLMPLTDLLEKSGFSCQIETSGTHEVRCTPNTWVTVSPKVNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLSDDKPRVIALQPISQKEDATRLCIETCIARNWRLSMQTHKYLNIA
>NZ_CP046283.1|WP_000036734.1|748603_749902_+|phosphopyruvate-hydratase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>NZ_CP046283.1|WP_000210863.1|746883_748521_+|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQLAVDIGREHALFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISMKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIYEEANPAGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETRGVEILKDLDAILIPGGFGYRGVEGKIATARYARENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLSDDSLVRQLYGASTIVERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAANEHQKRQAK
>NZ_CP046283.1|WP_000210449.1|745855_746656_+|nucleoside-triphosphate-pyrophosphohydrolase
MTTNHQIDRLLTLMQRLRDPENGCPWDKEQTFASIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFGELSADNSEEALVRWEQIKTEERAQKAQHSALDDIPRSFPALMRAQKIQKRCSNVGFDWTTLGPVVDKVYEEIDEVMFEARQAVVDQAKLEEEMGDLLFATVNMARHLGTKAELALQKANDKFERRFREVERIVAARGLEMTGVDLETMEEVWQEVKRQEIDL
>NZ_CP046283.1|WP_001532579.1|744791_745088_+|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MRMVKLTPKASEDLENIWHYGWQHFGEIQADRYINHLSEIFSIMSANNIGTPRPELGEYIYALPFKRHIIYFIQSVTEVIVIRILSQNQDAGKHVNWL
>NZ_CP046283.1|WP_000480218.1|744469_744826_+|type-II-toxin-antitoxin-system-ParD-family-antitoxin
MFLTYISFPVYSYVRFILTVEAVMARTMTVDLGDELREFIESLIESGDYRTQSEVIRESLRLLREKQAESRLQALRELLAEGLNSGEPQAWEKDAFLRKVKTGMIKPDENGKINAKGQ
>NZ_CP046283.1|WP_000226838.1|742151_744386_+|GTP-diphosphokinase
MVAVRSAHINKAGEFDPKKWIASLGISSQQSCERLAETWAYCLQQTQGHPDADLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSIVTLIHGVRDMAAIRQLNATHNDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKEAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPAEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKNEGVQAEVYGRPKHIYSIWRKMQKKHLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAASGGVRSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNIQAGRQILDDELAHLGISLKEAEKHLLPRYNFNELEELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKTYAPQNRRKDDGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVEAVWGESYSAGYSLVVRVQANDRSGLLRDITTILANEKVNVLGVASRSDIKQQIATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGG
>NZ_CP046283.1|WP_000046849.1|740804_742100_+|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MAQFYSAKRRVTTRQIITVKVNDLDSFGQGVARHNGKALFIPGLLPEESAEVIITEDKKQFARARVSRRLNDSPERETPRCPHFGVCGGCQQQHVSIALQQRSKSAALARLMKHEVNDIIAGAPWGYRRRARLSLNCPPDKPLQMGFRKAGSSDIVNVEQCPVLAPQLAALLPRIRACLASLHGTRHLGHVELVQAGSGTLMILRHTAPLSAADKEKLERFSHSEGLSLFLAPFSEILETVSGEAPWYDSHGLRLAFSPRDFIQVNEAVNQQMVARALEWLDVRAEDRVLDLFCGMGNFTLPLATRAASVIGVEGVPALVEKGRENAIRNGLHNVTFFHENLEEDVTKQPWAKNGFDKVLLDPARAGATGVMRHIIKLKPIRIVYVSCNPATLARDSEALVNAGYEVTRLAMLDMFPHTGHLESMVLFERM
>NZ_CP046283.1|WP_000186400.1|737990_740747_-|two-component-sensor-histidine-kinase-BarA
MTNYSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDAGASIIEPLAVSSEYGMNLQNRESIGQLISVLHRRHSDIVRAISVYDDHNRLFVTSNFHLDPSQMQLPAGAPFPRRLSVDRHGDIMILRTPIISESYSPDESAIADAKNTKNMLGYVALELDLKSVRLQQYKEIFISSVMMLFCIGIALIFGWRLMRDVTGPIRNMVNTVDRIRRGQLDSRVEGFMLGELDMLKNGINSMAMSLAAYHEEMQHNIDQATSDLRETLEQMEIQNVELDLAKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELNPTQRDHLNTIERSANNLLAIINDVLDFSKLEAGKLILESIPFPLRNTLDEVVTLLAHSSHDKGLELTLNIKNDVPDNVIGDPLRLQQVITNLVGNAIKFTESGNIDILVEKRALSNTKVQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNRGSTFWFHINLDLNPNVIIDGPSTACLAGKRLAYVEPNATAAQCTLDLLSDTPVEVVYSPTFSALPLAHYDIMILSVPVTFREPLTMQHERLAKAASMTDFLLLALPCHAQINAEKLKQGGAAACLLKPLTSTRLLPALTEYCQLNHHPEPLLMDTSKITMTVMAVDDNPANLKLIGALLEDKVQHVELCDSGHQAVDRAKQMQFDLILMDIQMPDMDGIRACELIHQLPHQQQTPVIAVTAHAMAGQKEKLLSAGMNDYLAKPIEEEKLHNLLLRYKPGANVAARLMAPEPAEFIFNPNATLDWQLALRQAAGKPDLARDMLQMLIDFLPEVRNKIEEQLVGENPNGLVDLVHKLHGSCGYSGVPRMKNLCQLIEQQLRSGVHEEELEPEFLELLDEMDNVAREAKKILG
>NZ_CP046283.1|WP_000706494.1|736804_737947_+|glycerate-kinase
MKIVIAPDSYKESLSALEVATAIEQGFREIWPDADYLKLPLADGGEGTVKAMVEATAGRIVHVEVTGPLGHRVNAFYGLSGDARSAFIEMAAASGLEQVPPAQRDPLKTTSWGTGELIRHALDAGVEHIIIGIGGSATNDGGAGMVQALGARLRDAQGNDIAQGGIGLETLASIDISGLDKRLSACHIEVACDVTNPLTGKEGASAVFGPQKGATPEMIERLDTALTRYAHLIARDLHVDVLDLAGGGAAGGMGAALYAFCGAQLRRGIEIVTDALHLEACLADADLVITGEGRIDSQTIHGKVPIGVANIAKRYNKPVIGIAGSLTADVSVVHEHGLDAVFSVIYTICTLEDALKNASENVRMTARNVAATLKAGQQLR
>NZ_CP046283.1|WP_001208013.1|752230_753028_+|MBL-fold-metallo-hydrolase
MALRIRVLLENHKGAGADKSLKVRPGLSLLVEDESTSILFDTGPDGSFMQNALAMGIDLSDVSAVVLSHGHYDHCGGVPWLPDSSRIICHPDIARERYAAMTFLGITRKIKKLSCEVDYSRYRMMYTRDPLPIGENFIWSGEIPVVAPEAYGIFGGHDAEPDSILDEGVLIYQSTKGLVIITGCGHRGIANIVRHCQNITGIKRIYALVGGFHLRCASPFTLWRVRRFLQEHKPEKLCGCHCTGAWGRLWLPEITAPATGDVLRF
>NZ_CP046283.1|WP_000108313.1|753115_753478_-|6-carboxytetrahydropterin-synthase-QueD
MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCVYRGE
>NZ_CP046283.1|WP_000210927.1|753901_755701_+|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit
MTTPAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGAVAVTPVPERKMPRVTLISASQTGNARRVAEALRDDLLAANLNVTLVNAGDYKFKQIASEKLLVIVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDVLKSRAPVAAPSQSVATGAVNDIHTSPYTKDAPLIATLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVDGKTLPLAEALEWHFELTVNTANIVENYATLTRSESLLPLVGDKAQLQHYAATTPIVDMVRFSPAQLDAQALIDLLRPLTPRLYSIASAQAEVESEVHITVGVVRYDIEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRSFMQQRAAEGVEGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLSRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY
>NZ_CP046283.1|WP_001290660.1|755700_757413_+|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAAQKLEPRHAMLLRCRLPGGVITTTQWQAIDKFAADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGLETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDDKWHLTLFIENGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIIASVPESQKAKIETLARDHGLMNAVKPQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGNRIGSRIPRMYKENIAEPDILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>NZ_CP046283.1|WP_000080404.1|757488_758223_+|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVMALAETNAQLEKLSAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP046283.1|WP_001145543.1|758310_759264_-|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGSKMTWHPELLQESISTLRKEVTGNAQIKTAVYEMMRPAEAPDHPLVEWQDSLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFSEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLT
>NZ_CP046283.1|WP_000029738.1|759708_762372_+|CRISPR-associated-helicase/endonuclease-Cas3
MSIYHYWGKSRRGETDGGDDYHLLCWHSLDVAAVGYWMVINNIYFIDHYLKKLGIQDKEQAAQFFAWILCWHDIGKFAHSFQQLYRHEALNIFNEPTRHYEKIAHTTLGYMLWNSWLSECPELFPPSSLSVRKSKRVMALWMPVTTGHHGRPPEAIQELDHFRQQDKDAARDFLLRIKALFPLITLPEAWDEDEGIDQFQQLSWFISAAVVLADWTGSASRYFPRTAEKMPVDTYWQQALAKAQTAITLFPSAANVSAFTGIETLFPFIQHPTPLQQKALELDINVDGAQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLYFGLPTMATANAMFERMANTWLALYQPDSRPSLILAHSARRLMDRFNQSIWSVTLSGTEEPDEAQPYSQGCAAWFADSNKKALLAEVGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAWMSRILEGLIERQASNGNATILLSATLSQQQRDKLVAAFSRGVRRSVQAPLLGHDDYPWLTQVTQTELISQRVDTRKEVERCVDIGWLHSEEACLERIGEAVEKGNCIAWIRNSVDDAIRIYRQLQLSKVVVTENLLLFHSRFAFYDRQRIESQTLNLFGKQSGAQRAGKVIIATQVIEQSLDIDCDEMISDLAPVDLLIQRAGRLQRHIRDRNGLVKKSGQDERETPVLRILAPEWDDAPRENWLSSAMRNSAYVYPDHGRMWLTQRILREQGTIRMPQSARLLIESVYGEDVNMPVGFAKTEQLQEGKFYCDRAFAGQMLLNFAPGYCAEISDSLPEKMSTRLAEESVTLWLAKIVDSVVTPYASGEHAWEMSVLRVRQSWWNKHKDEFEKLDGEPLRKWCAQQHQDKDFATVIVVTDFAACGYSANEGLIGMMGE
>NZ_CP046283.1|WP_000368584.1|762383_763940_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDNFSLLTTPWLPVRFKDGSTGKLAPVDLADENVVDIAATRADLQGAAWQFLLGLLQCSIAPKRYKNWEDIWFDGLHADVLHKALAPLEHAFQFGAETPSFMQDFEPLSGEKVSIASLLPEIPGAQTTKFNKDHFVKRGVTERFCPHCAALALFSLQLNAPAGGKGYRTGLRGGGPLTTLVELQEYQGERQTPLWRKLWLNVMPQDTADLPLPDQCDATVFPWLAATRTSEQANAVTTPEQVNKLQAYWGMPRRIRLDFATLQSGCCDICGAESDELLGFMTVKNYGVNYDGWRHPLTPYRAPVKDQNAFFSVKPQPGGLIWRDWLGLSQNNQTEANYESPAQVVKVFNARSLTDVKAGIWGFGADFDNMKIRCWYEHHFPLLMTEGLIPDLRKAVQTAARLLSLLRSALKEAWFADAKGARGDFSFIDIDFWNLTQGRFLNLIHDLENGHKPDERLNKWQRELWLFTRHYFDDHVFTNPYESSDLERIMTARKKYFTTSAEKQSAKAAKAKKQEAAE
>NZ_CP046283.1|WP_000117946.1|763936_764497_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSVVTKDDKATLRQWHEELQEKRGLRASLRRSKTVNDACLAEGLHSLLMQTHSLWKNKAPWNVTALAITAALAAHIKFIDEQKSFAAQLGQKKGGDTPVMSKLRFSHLLAVKTPDELLRQLRRAVKLLDGSVNLFSLADDIFCWCQEQNDLLNHHRRQQRPTEFLRIRWALEYYQAGDGDTDNEQD
>NZ_CP046283.1|WP_000206415.1|764510_765569_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRISSQSLKRAWRTSELFEQALAGHIGIRTGRIAREAAQILVDSGIDAKKAVEYVKNIANCFGKVKEDKKPKDELTNAETEQLVHISPAEFEAVKALARRLAEEKRPATEEEAELLRHDRMAVDIAMFGRMLAKKTDFNVEAACQVAHAFGVSETIIEDDFFTAVDDLRQASAEDAGAGHLGETGFGSALFYTYICIDKDLLVKNLNDNEELANKTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTDQLNVAVKRITSLHKNMNKVYGQRTDTASFDVMNQQGSMEDVLDFICA

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Crispr_ID: NZ_CP046283_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046283_3

768265-769028

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

12 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NZ_CP046283_3

>merge|NZ_CP046283|3|768265-769028|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGTGAGCAACGACAGTAAATAATTTTTCGTGCTGGTGTTCCCCGCGCCAGCGGGGATAAACCGCCAGTGGGCGTAGCCAGCTCATCGCTATTTTGCGTGTTCCCCGCGCCAGCGGGGATAAACCGCGTTGCGGATTATCGTTAAGACTGAAGGAAGTGTGTTCCCCGCGCCAGCGGGGATAAACCGCGTCGCGGAAAATTTCGCATTGACGATAAAGAGTGTTCCCCGCGCCAGCGGGGATAAACCGTTACGTGTTTATTCATCTGTTGCATTAGATTCGTGTTCCCCGCGCCAGCGGGGATAAACCTGAGGCGTACAGGCTGTTAGATGAGAAATTACCGTGTTCCCCGCGCCAGCGGGGATAAACCGACGCCCCGAATGTGTTTGCCTCGCCCGCTGCCGTGTTCCCCGCGCCAGCGGGGATAAACCGTGGATTATCTGTATTTTACGGAAGTGGGCGCGGTGTTCCCCGCGCCAGCGGGGATAAACCGGTCGTTCATCAGGCACTACCGGCACTTTCTGGGTGTTCCCCGCGCCAGCGGGGATAAACCGATATTCGCCGCTTTCCATTTACCGAACGTAACGTGTTCCCCGCGCCAGCGGGGATAAACCGCCACGTTCGGCGATGTTGGCCCCATCGGTCCAGTGTTCCCCGCGCCAGCGGGGATAAACCGAAACGGTAGTGTTTTAAAACCGTTTCGAGGTGCGTGTTCCCCGCGCCAGCGGGGATAAACCGA

>NZ_CP046283|3|3|768265-768965|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGAGCAACGACAGTAAATAATTTTTCGTGCTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGTGGGCGTAGCCAGCTCATCGCTATTTTGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTGCGGATTATCGTTAAGACTGAAGGAAGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTCGCGGAAAATTTCGCATTGACGATAAAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTACGTGTTTATTCATCTGTTGCATTAGATTC
GTGTTCCCCGCGCCAGCGGGGATAAACCT	GAGGCGTACAGGCTGTTAGATGAGAAATTACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACGCCCCGAATGTGTTTGCCTCGCCCGCTGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGGATTATCTGTATTTTACGGAAGTGGGCGCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTCGTTCATCAGGCACTACCGGCACTTTCTGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATATTCGCCGCTTTCCATTTACCGAACGTAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCACGTTCGGCGATGTTGGCCCCATCGGTCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG

>NZ_CP046283|3|3|768265-769028|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGAGCAACGACAGTAAATAATTTTTCGTGCTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGTGGGCGTAGCCAGCTCATCGCTATTTTGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTGCGGATTATCGTTAAGACTGAAGGAAGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTCGCGGAAAATTTCGCATTGACGATAAAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTACGTGTTTATTCATCTGTTGCATTAGATTC
GTGTTCCCCGCGCCAGCGGGGATAAACCT	GAGGCGTACAGGCTGTTAGATGAGAAATTACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACGCCCCGAATGTGTTTGCCTCGCCCGCTGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGGATTATCTGTATTTTACGGAAGTGGGCGCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTCGTTCATCAGGCACTACCGGCACTTTCTGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATATTCGCCGCTTTCCATTTACCGAACGTAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCACGTTCGGCGATGTTGGCCCCATCGGTCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAACGGTAGTGTTTTAAAACCGTTTCGAGGTGC
GTGTTCCCCGCGCCAGCGGGGATAAACCGA

>NZ_CP046283|3|2|768265-769027|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGAGCAACGACAGTAAATAATTTTTCGTGCTG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGTGGGCGTAGCCAGCTCATCGCTATTTTGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTTGCGGATTATCGTTAAGACTGAAGGAAGT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGTCGCGGAAAATTTCGCATTGACGATAAAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TTACGTGTTTATTCATCTGTTGCATTAGATTC
GTGTTCCCCGCGCCAGCGGGGATAAACCT	GAGGCGTACAGGCTGTTAGATGAGAAATTACC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACGCCCCGAATGTGTTTGCCTCGCCCGCTGCC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGGATTATCTGTATTTTACGGAAGTGGGCGCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTCGTTCATCAGGCACTACCGGCACTTTCTGG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATATTCGCCGCTTTCCATTTACCGAACGTAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCACGTTCGGCGATGTTGGCCCCATCGGTCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AAACGGTAGTGTTTTAAAACCGTTTCGAGGTGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046283.1\|WP_000080404.1\|757488_758223_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP046283.1\|WP_000117946.1\|763936_764497_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP046283.1\|WP_000253545.1\|777743_778370_+\|protein-L-isoaspartate(D-aspartate)-O-methyltransferase	unknown	unknown	gnl\|CDD\|178974
NZ_CP046283.1\|WP_001092263.1\|771847_773287_+\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP046283.1\|WP_000517480.1\|774442_774754_+\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
NZ_CP046283.1\|WP_000490481.1\|769632_770679_-\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NZ_CP046283.1\|WP_000029738.1\|759708_762372_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP046283.1\|WP_000281486.1\|766307_766958_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
NZ_CP046283.1\|WP_001518648.1\|767874_768168_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_CP046283.1\|WP_000368584.1\|762383_763940_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_CP046283.1\|WP_000206415.1\|764510_765569_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP046283.1\|WP_000085114.1\|765579_766326_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NZ_CP046283.1\|WP_000144831.1\|766954_767875_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP046283.1\|WP_001145543.1\|758310_759264_-\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
NZ_CP046283.1\|WP_000134246.1\|775958_777008_+\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NZ_CP046283.1\|WP_000741650.1\|774772_775483_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NZ_CP046283.1\|WP_000372384.1\|770929_771838_+\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP046283.1\|WP_001173663.1\|773273_773879_+\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NZ_CP046283.1\|WP_001219245.1\|775482_775962_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
NZ_CP046283.1\|WP_001221538.1\|776988_777750_+\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732

Protein	Function_ID	Function_description	E-value
NZ_CP046283.1\|WP_000080404.1\|757488_758223_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	2.40487e-139
NZ_CP046283.1\|WP_000117946.1\|763936_764497_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	8.53741e-34
NZ_CP046283.1\|WP_000253545.1\|777743_778370_+\|protein-L-isoaspartate(D-aspartate)-O-methyltransferase	gnl\|CDD\|178974	PRK00312, pcm, protein-L-isoaspartate(D-aspartate) O-methyltransferase.	7.37904e-129
NZ_CP046283.1\|WP_001092263.1\|771847_773287_+\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP046283.1\|WP_000517480.1\|774442_774754_+\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	1.08865e-64
NZ_CP046283.1\|WP_000490481.1\|769632_770679_-\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NZ_CP046283.1\|WP_000029738.1\|759708_762372_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	0
NZ_CP046283.1\|WP_000281486.1\|766307_766958_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	1.11215e-74
NZ_CP046283.1\|WP_001518648.1\|767874_768168_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	1.1867e-62
NZ_CP046283.1\|WP_000368584.1\|762383_763940_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
NZ_CP046283.1\|WP_000206415.1\|764510_765569_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	2.67517e-131
NZ_CP046283.1\|WP_000085114.1\|765579_766326_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	7.90971e-48
NZ_CP046283.1\|WP_000144831.1\|766954_767875_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	1.59811e-156
NZ_CP046283.1\|WP_001145543.1\|758310_759264_-\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
NZ_CP046283.1\|WP_000134246.1\|775958_777008_+\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NZ_CP046283.1\|WP_000741650.1\|774772_775483_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	2.67998e-119
NZ_CP046283.1\|WP_000372384.1\|770929_771838_+\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP046283.1\|WP_001173663.1\|773273_773879_+\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	4.61291e-146
NZ_CP046283.1\|WP_001219245.1\|775482_775962_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	3.20925e-104
NZ_CP046283.1\|WP_001221538.1\|776988_777750_+\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.7078e-146

>NZ_CP046283.1|WP_001518648.1|767874_768168_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMVVVVTENVPPRLRGRLAVWLLEVRAGVYVGDTSKRIREMIWQQITQLGGVGNVVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVENQ
>NZ_CP046283.1|WP_000144831.1|766954_767875_+|type-I-E-CRISPR-associated-endonuclease-Cas1
MTFVPLNPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVRLASTVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALDDDLRLKVVRKMYELRFREPPPARRAVEQLRGIEGSRVRATYALLAKQYGVKWHGRNYDPKDWEKGDVVNRCISAATSCLYGISEAAILAAGYAPAIGFIHSGKPLSFVYDIADIIKFESVVPKAFEIAARHPAEPDKEVRLACRDIFRSSKLTGKLIPLIEEVLAAGEIEPPQPAPDMLPPAIPEPESLGDSGHRGHG
>NZ_CP046283.1|WP_000281486.1|766307_766958_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRITLHTSELSPAQLLHLVERGEYVMHQWLWDLFPGSKERQFLYRREELQGAFRFFVLSQEQPAASAIFDVQTRPFAPTLSAGQTLRFNLRANPTVCKNGKRHDLLMEAKRQRKTQGDSQDIWSYQQQAALTWLARQGEQNGFTLREASVDAYRQQQIRRGKDRQMIQFSSVDYTGVLVINEPALFLQRLAQGFGKSRAFGCGMMMIKPGDDA
>NZ_CP046283.1|WP_000085114.1|765579_766326_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSQYLVFQLHGPMASWGVDAPGEVRHSHELPSRSALLGLLAAALGIRRDEEERLNAFNRHYQFLLCASGNPRWARDYHTVQMPKEVRKARYFSRREELQDPELLSALISRRDYYTDAWWMIAVSATPDAPYTLAQLQTSLQHPVFPLYLGRKSHPLALPLAPQLLEGSAAGVLREAYRWYQDQFNALKLPLPRLQNECWWEGEHDGLTASKILRRRDMPLSRQQWLFGERSVNQGPWLRKEDACISQE
>NZ_CP046283.1|WP_000206415.1|764510_765569_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRISSQSLKRAWRTSELFEQALAGHIGIRTGRIAREAAQILVDSGIDAKKAVEYVKNIANCFGKVKEDKKPKDELTNAETEQLVHISPAEFEAVKALARRLAEEKRPATEEEAELLRHDRMAVDIAMFGRMLAKKTDFNVEAACQVAHAFGVSETIIEDDFFTAVDDLRQASAEDAGAGHLGETGFGSALFYTYICIDKDLLVKNLNDNEELANKTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTDQLNVAVKRITSLHKNMNKVYGQRTDTASFDVMNQQGSMEDVLDFICA
>NZ_CP046283.1|WP_000117946.1|763936_764497_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSVVTKDDKATLRQWHEELQEKRGLRASLRRSKTVNDACLAEGLHSLLMQTHSLWKNKAPWNVTALAITAALAAHIKFIDEQKSFAAQLGQKKGGDTPVMSKLRFSHLLAVKTPDELLRQLRRAVKLLDGSVNLFSLADDIFCWCQEQNDLLNHHRRQQRPTEFLRIRWALEYYQAGDGDTDNEQD
>NZ_CP046283.1|WP_000368584.1|762383_763940_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDNFSLLTTPWLPVRFKDGSTGKLAPVDLADENVVDIAATRADLQGAAWQFLLGLLQCSIAPKRYKNWEDIWFDGLHADVLHKALAPLEHAFQFGAETPSFMQDFEPLSGEKVSIASLLPEIPGAQTTKFNKDHFVKRGVTERFCPHCAALALFSLQLNAPAGGKGYRTGLRGGGPLTTLVELQEYQGERQTPLWRKLWLNVMPQDTADLPLPDQCDATVFPWLAATRTSEQANAVTTPEQVNKLQAYWGMPRRIRLDFATLQSGCCDICGAESDELLGFMTVKNYGVNYDGWRHPLTPYRAPVKDQNAFFSVKPQPGGLIWRDWLGLSQNNQTEANYESPAQVVKVFNARSLTDVKAGIWGFGADFDNMKIRCWYEHHFPLLMTEGLIPDLRKAVQTAARLLSLLRSALKEAWFADAKGARGDFSFIDIDFWNLTQGRFLNLIHDLENGHKPDERLNKWQRELWLFTRHYFDDHVFTNPYESSDLERIMTARKKYFTTSAEKQSAKAAKAKKQEAAE
>NZ_CP046283.1|WP_000029738.1|759708_762372_+|CRISPR-associated-helicase/endonuclease-Cas3
MSIYHYWGKSRRGETDGGDDYHLLCWHSLDVAAVGYWMVINNIYFIDHYLKKLGIQDKEQAAQFFAWILCWHDIGKFAHSFQQLYRHEALNIFNEPTRHYEKIAHTTLGYMLWNSWLSECPELFPPSSLSVRKSKRVMALWMPVTTGHHGRPPEAIQELDHFRQQDKDAARDFLLRIKALFPLITLPEAWDEDEGIDQFQQLSWFISAAVVLADWTGSASRYFPRTAEKMPVDTYWQQALAKAQTAITLFPSAANVSAFTGIETLFPFIQHPTPLQQKALELDINVDGAQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLYFGLPTMATANAMFERMANTWLALYQPDSRPSLILAHSARRLMDRFNQSIWSVTLSGTEEPDEAQPYSQGCAAWFADSNKKALLAEVGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAWMSRILEGLIERQASNGNATILLSATLSQQQRDKLVAAFSRGVRRSVQAPLLGHDDYPWLTQVTQTELISQRVDTRKEVERCVDIGWLHSEEACLERIGEAVEKGNCIAWIRNSVDDAIRIYRQLQLSKVVVTENLLLFHSRFAFYDRQRIESQTLNLFGKQSGAQRAGKVIIATQVIEQSLDIDCDEMISDLAPVDLLIQRAGRLQRHIRDRNGLVKKSGQDERETPVLRILAPEWDDAPRENWLSSAMRNSAYVYPDHGRMWLTQRILREQGTIRMPQSARLLIESVYGEDVNMPVGFAKTEQLQEGKFYCDRAFAGQMLLNFAPGYCAEISDSLPEKMSTRLAEESVTLWLAKIVDSVVTPYASGEHAWEMSVLRVRQSWWNKHKDEFEKLDGEPLRKWCAQQHQDKDFATVIVVTDFAACGYSANEGLIGMMGE
>NZ_CP046283.1|WP_001145543.1|758310_759264_-|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGSKMTWHPELLQESISTLRKEVTGNAQIKTAVYEMMRPAEAPDHPLVEWQDSLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFSEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLT
>NZ_CP046283.1|WP_000080404.1|757488_758223_+|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVMALAETNAQLEKLSAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP046283.1|WP_000490481.1|769632_770679_-|aminopeptidase
MFSATRRFAVILALGVGFILPAQAASPGPGEIANTQARHIATFFPGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYTTKDNRKNWHNVTGSTVIAAHEGRVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAARLKDIPTHYGIRFIATSGEEEGKLGAENLLKRMSDAEKKNTLLVINLDNLIVGDKLYFNSGKNTPEAVRTLTRDRALAIARRYGIAANTNPGRNPSYPKGTGCCNDAEVFDKAGISVLSVEATNWNLGKKDGYQQRVKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKELAKAEKTS
>NZ_CP046283.1|WP_000372384.1|770929_771838_+|sulfate-adenylyltransferase-subunit-CysD
MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTANAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF
>NZ_CP046283.1|WP_001092263.1|771847_773287_+|sulfate-adenylyltransferase-subunit-CysN
MNTILAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTERRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYREETFARIREDYLTFAEQLPGDLDIRFVPLSALEGDNVAAQSANMRWYSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPSGVESSVARIVTFDGDKEEACAGEAITLVLNDDIDISRGDLLLAANETLAPARHAAIDVVWMAEQPLAPGQSYDVKLAGKKTRARIEAIRYQIDINNLTQRDVESLPLNGIGLVEMTFDEPLALDIYQQNPVTGGLIFIDRLSNVTVGAGMVRELDERGATPPVEYSAFELELNALVRRHFPHWDARDLLGDKHGAA
>NZ_CP046283.1|WP_001173663.1|773273_773879_+|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVAAREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHLNGEQLVTNLVSQLLDLLRRRDIIRS
>NZ_CP046283.1|WP_000517480.1|774442_774754_+|cell-division-protein-FtsB
MGKLTLLLLALLVWLQYSLWFGKNGIHDYSRVNDDVVAQQATNAKLKARNDQLFAEIDDLNGGQEAIEERARNELSMTKPGETFYRLVPDASKRAATAGQTHR
>NZ_CP046283.1|WP_000741650.1|774772_775483_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MAATLLDVCAVVPAAGFGRRMQTECPKQYLSIGNKTILEHSVHALLAHPRVTRVVIAISPGDHRFAQLPLANHPQITVVDGGNERADSVLAGLQAVAKAQWVLVHDAARPCLHQDDLARLLAISENSRVGGILASPVRDTMKRGEPGKNAIAHTVERADLWHALTPQFFPRELLYDCLTRALNEGATITDEASALEYCGFHPALVEGRADNIKVTRPEDLALAEFYLTRTIHQEKA
>NZ_CP046283.1|WP_001219245.1|775482_775962_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDEVNVKATTTEKLGFTGRGEGIACEAVALLMKAAK
>NZ_CP046283.1|WP_000134246.1|775958_777008_+|tRNA-pseudouridine(13)-synthase-TruD
MTEFDNLTWLHGKPQGSGLLKANPEDFVVVEDLGFTPDGEGEHILLRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDFSAFQLEGCKVLEYARHKRKLRLGALKGNAFTLVLREISDRRDVETRLQAIRDGGVPNYFGAQRFGIGGSNLQGALRWAQSNAPVRDRNKRSFWLSAARSALFNQIVHQRLKKPDFNQVVDGDALQLAGRGSWFVATSEELPELQRRVDEKELMITASLPGSGEWGTQRAALAFEQDAIAQETVLQSLLLREKVEASRRAMLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAHIAE
>NZ_CP046283.1|WP_001221538.1|776988_777750_+|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFDNGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNGYQHYDTAAAVTCALLRGLSREPLRTGRILNVNVPDLPLAQVKGIRVTRCGSRHPADKVIPQEDPRGNTLYWIGPPGDKYDAGPDTDFAAVDEGYVSVTPLHVDLTAHSAHDVVSDWLDSVGVGTQW
>NZ_CP046283.1|WP_000253545.1|777743_778370_+|protein-L-isoaspartate(D-aspartate)-O-methyltransferase
MVSGRVQALLEQLRAQGIRDEQVLNALAAVPREKFIDEAFEHKAWENIALPIGQGQTISQPYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHLVHHVCSVERIKGLQWQARRRLKQLDLHNVSTRHGDGWQGWQARAPFDAIIVTAAPPEIPTALMAQLDEGGILVLPVGDEQQFLKRVRRRGGEFIIDTVEAVRFVPLVKGELA

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Crispr_ID: NZ_CP046283_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046283_4

769102-769618

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

8 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NZ_CP046283_4

>merge|NZ_CP046283|4|769102-769618|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGAGCCGTTTCCGCTAAATACCCCCGCAGTGATTGTGTTCCCCGCGCCAGCGGGGATAAACCGTCTGGTTATAACATCGCAGCAAAATCAAAAGAGTGTTCCCCGCGCCAGCGGGGATAAACCGGCACTATTTCGAATGTCTCGACGCCAGATTTAGTGTTCCCCGCGCCAGCGGGGATAAACCGAACGAATTGAGACTATTAGAGATTATTCGCCTGTGTTCCCCGCGCCAGCGGGGATAAACCGGCAACCCATTAATTAACTAAGCAGTAATAAACGTGTTCCCCGCGCCAGCGGGGATAAACCGTGACGAGGTGCGAGCGATGGTATCAAGGCCTAGTGTTTCCCGCGCCAGCGGGGATAAACCGGGTTAACCAGGGGTTTTTCCCCACTATTTCGCGTGTTCCCCGCGCCAGCGGGGATAAACCGAGGGGCGTTCCGCAGTCGACAAGGGCTGAAAAATGTTCCCCGCGCCAGCGGGGATAAACAC

>NZ_CP046283|4|4|769102-769557|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGCCGTTTCCGCTAAATACCCCCGCAGTGATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCTGGTTATAACATCGCAGCAAAATCAAAAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCACTATTTCGAATGTCTCGACGCCAGATTTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACGAATTGAGACTATTAGAGATTATTCGCCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAACCCATTAATTAACTAAGCAGTAATAAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGACGAGGTGCGAGCGATGGTATCAAGGCCTA
GTGTTTCCCGCGCCAGCGGGGATAAACCG	GGTTAACCAGGGGTTTTTCCCCACTATTTCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG

>NZ_CP046283|4|4|769102-769618|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGCCGTTTCCGCTAAATACCCCCGCAGTGATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCTGGTTATAACATCGCAGCAAAATCAAAAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCACTATTTCGAATGTCTCGACGCCAGATTTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACGAATTGAGACTATTAGAGATTATTCGCCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAACCCATTAATTAACTAAGCAGTAATAAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGACGAGGTGCGAGCGATGGTATCAAGGCCTA
GTGTTTCCCGCGCCAGCGGGGATAAACCG	GGTTAACCAGGGGTTTTTCCCCACTATTTCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGGGGCGTTCCGCAGTCGACAAGGGCTGAAAA
ATGTTCCCCGCGCCAGCGGGGATAAACAC

>NZ_CP046283|4|3|769102-769618|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGCCGTTTCCGCTAAATACCCCCGCAGTGATT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TCTGGTTATAACATCGCAGCAAAATCAAAAGA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCACTATTTCGAATGTCTCGACGCCAGATTTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACGAATTGAGACTATTAGAGATTATTCGCCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCAACCCATTAATTAACTAAGCAGTAATAAAC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGACGAGGTGCGAGCGATGGTATCAAGGCCTA
GTGTTTCCCGCGCCAGCGGGGATAAACCG	GGTTAACCAGGGGTTTTTCCCCACTATTTCGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AGGGGCGTTCCGCAGTCGACAAGGGCTGAAAA
ATGTTCCCCGCGCCAGCGGGGATAAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046283.1\|WP_000080404.1\|757488_758223_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP046283.1\|WP_000117946.1\|763936_764497_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP046283.1\|WP_000253545.1\|777743_778370_+\|protein-L-isoaspartate(D-aspartate)-O-methyltransferase	unknown	unknown	gnl\|CDD\|178974
NZ_CP046283.1\|WP_001092263.1\|771847_773287_+\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP046283.1\|WP_000517480.1\|774442_774754_+\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
NZ_CP046283.1\|WP_000490481.1\|769632_770679_-\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NZ_CP046283.1\|WP_000029738.1\|759708_762372_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP046283.1\|WP_000281486.1\|766307_766958_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
NZ_CP046283.1\|WP_001518648.1\|767874_768168_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_CP046283.1\|WP_000368584.1\|762383_763940_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_CP046283.1\|WP_000206415.1\|764510_765569_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP046283.1\|WP_000085114.1\|765579_766326_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NZ_CP046283.1\|WP_000144831.1\|766954_767875_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP046283.1\|WP_001145543.1\|758310_759264_-\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
NZ_CP046283.1\|WP_000134246.1\|775958_777008_+\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NZ_CP046283.1\|WP_000741650.1\|774772_775483_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NZ_CP046283.1\|WP_000372384.1\|770929_771838_+\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP046283.1\|WP_001173663.1\|773273_773879_+\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NZ_CP046283.1\|WP_001219245.1\|775482_775962_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
NZ_CP046283.1\|WP_001221538.1\|776988_777750_+\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732

Protein	Function_ID	Function_description	E-value
NZ_CP046283.1\|WP_000080404.1\|757488_758223_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	2.40487e-139
NZ_CP046283.1\|WP_000117946.1\|763936_764497_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	8.53741e-34
NZ_CP046283.1\|WP_000253545.1\|777743_778370_+\|protein-L-isoaspartate(D-aspartate)-O-methyltransferase	gnl\|CDD\|178974	PRK00312, pcm, protein-L-isoaspartate(D-aspartate) O-methyltransferase.	7.37904e-129
NZ_CP046283.1\|WP_001092263.1\|771847_773287_+\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP046283.1\|WP_000517480.1\|774442_774754_+\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	1.08865e-64
NZ_CP046283.1\|WP_000490481.1\|769632_770679_-\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NZ_CP046283.1\|WP_000029738.1\|759708_762372_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	0
NZ_CP046283.1\|WP_000281486.1\|766307_766958_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	1.11215e-74
NZ_CP046283.1\|WP_001518648.1\|767874_768168_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	1.1867e-62
NZ_CP046283.1\|WP_000368584.1\|762383_763940_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	0
NZ_CP046283.1\|WP_000206415.1\|764510_765569_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	2.67517e-131
NZ_CP046283.1\|WP_000085114.1\|765579_766326_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	7.90971e-48
NZ_CP046283.1\|WP_000144831.1\|766954_767875_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	1.59811e-156
NZ_CP046283.1\|WP_001145543.1\|758310_759264_-\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
NZ_CP046283.1\|WP_000134246.1\|775958_777008_+\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NZ_CP046283.1\|WP_000741650.1\|774772_775483_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	2.67998e-119
NZ_CP046283.1\|WP_000372384.1\|770929_771838_+\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP046283.1\|WP_001173663.1\|773273_773879_+\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	4.61291e-146
NZ_CP046283.1\|WP_001219245.1\|775482_775962_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	3.20925e-104
NZ_CP046283.1\|WP_001221538.1\|776988_777750_+\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.7078e-146

>NZ_CP046283.1|WP_001518648.1|767874_768168_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMVVVVTENVPPRLRGRLAVWLLEVRAGVYVGDTSKRIREMIWQQITQLGGVGNVVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVENQ
>NZ_CP046283.1|WP_000144831.1|766954_767875_+|type-I-E-CRISPR-associated-endonuclease-Cas1
MTFVPLNPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVRLASTVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALDDDLRLKVVRKMYELRFREPPPARRAVEQLRGIEGSRVRATYALLAKQYGVKWHGRNYDPKDWEKGDVVNRCISAATSCLYGISEAAILAAGYAPAIGFIHSGKPLSFVYDIADIIKFESVVPKAFEIAARHPAEPDKEVRLACRDIFRSSKLTGKLIPLIEEVLAAGEIEPPQPAPDMLPPAIPEPESLGDSGHRGHG
>NZ_CP046283.1|WP_000281486.1|766307_766958_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRITLHTSELSPAQLLHLVERGEYVMHQWLWDLFPGSKERQFLYRREELQGAFRFFVLSQEQPAASAIFDVQTRPFAPTLSAGQTLRFNLRANPTVCKNGKRHDLLMEAKRQRKTQGDSQDIWSYQQQAALTWLARQGEQNGFTLREASVDAYRQQQIRRGKDRQMIQFSSVDYTGVLVINEPALFLQRLAQGFGKSRAFGCGMMMIKPGDDA
>NZ_CP046283.1|WP_000085114.1|765579_766326_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSQYLVFQLHGPMASWGVDAPGEVRHSHELPSRSALLGLLAAALGIRRDEEERLNAFNRHYQFLLCASGNPRWARDYHTVQMPKEVRKARYFSRREELQDPELLSALISRRDYYTDAWWMIAVSATPDAPYTLAQLQTSLQHPVFPLYLGRKSHPLALPLAPQLLEGSAAGVLREAYRWYQDQFNALKLPLPRLQNECWWEGEHDGLTASKILRRRDMPLSRQQWLFGERSVNQGPWLRKEDACISQE
>NZ_CP046283.1|WP_000206415.1|764510_765569_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRISSQSLKRAWRTSELFEQALAGHIGIRTGRIAREAAQILVDSGIDAKKAVEYVKNIANCFGKVKEDKKPKDELTNAETEQLVHISPAEFEAVKALARRLAEEKRPATEEEAELLRHDRMAVDIAMFGRMLAKKTDFNVEAACQVAHAFGVSETIIEDDFFTAVDDLRQASAEDAGAGHLGETGFGSALFYTYICIDKDLLVKNLNDNEELANKTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTDQLNVAVKRITSLHKNMNKVYGQRTDTASFDVMNQQGSMEDVLDFICA
>NZ_CP046283.1|WP_000117946.1|763936_764497_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSVVTKDDKATLRQWHEELQEKRGLRASLRRSKTVNDACLAEGLHSLLMQTHSLWKNKAPWNVTALAITAALAAHIKFIDEQKSFAAQLGQKKGGDTPVMSKLRFSHLLAVKTPDELLRQLRRAVKLLDGSVNLFSLADDIFCWCQEQNDLLNHHRRQQRPTEFLRIRWALEYYQAGDGDTDNEQD
>NZ_CP046283.1|WP_000368584.1|762383_763940_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDNFSLLTTPWLPVRFKDGSTGKLAPVDLADENVVDIAATRADLQGAAWQFLLGLLQCSIAPKRYKNWEDIWFDGLHADVLHKALAPLEHAFQFGAETPSFMQDFEPLSGEKVSIASLLPEIPGAQTTKFNKDHFVKRGVTERFCPHCAALALFSLQLNAPAGGKGYRTGLRGGGPLTTLVELQEYQGERQTPLWRKLWLNVMPQDTADLPLPDQCDATVFPWLAATRTSEQANAVTTPEQVNKLQAYWGMPRRIRLDFATLQSGCCDICGAESDELLGFMTVKNYGVNYDGWRHPLTPYRAPVKDQNAFFSVKPQPGGLIWRDWLGLSQNNQTEANYESPAQVVKVFNARSLTDVKAGIWGFGADFDNMKIRCWYEHHFPLLMTEGLIPDLRKAVQTAARLLSLLRSALKEAWFADAKGARGDFSFIDIDFWNLTQGRFLNLIHDLENGHKPDERLNKWQRELWLFTRHYFDDHVFTNPYESSDLERIMTARKKYFTTSAEKQSAKAAKAKKQEAAE
>NZ_CP046283.1|WP_000029738.1|759708_762372_+|CRISPR-associated-helicase/endonuclease-Cas3
MSIYHYWGKSRRGETDGGDDYHLLCWHSLDVAAVGYWMVINNIYFIDHYLKKLGIQDKEQAAQFFAWILCWHDIGKFAHSFQQLYRHEALNIFNEPTRHYEKIAHTTLGYMLWNSWLSECPELFPPSSLSVRKSKRVMALWMPVTTGHHGRPPEAIQELDHFRQQDKDAARDFLLRIKALFPLITLPEAWDEDEGIDQFQQLSWFISAAVVLADWTGSASRYFPRTAEKMPVDTYWQQALAKAQTAITLFPSAANVSAFTGIETLFPFIQHPTPLQQKALELDINVDGAQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLYFGLPTMATANAMFERMANTWLALYQPDSRPSLILAHSARRLMDRFNQSIWSVTLSGTEEPDEAQPYSQGCAAWFADSNKKALLAEVGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAWMSRILEGLIERQASNGNATILLSATLSQQQRDKLVAAFSRGVRRSVQAPLLGHDDYPWLTQVTQTELISQRVDTRKEVERCVDIGWLHSEEACLERIGEAVEKGNCIAWIRNSVDDAIRIYRQLQLSKVVVTENLLLFHSRFAFYDRQRIESQTLNLFGKQSGAQRAGKVIIATQVIEQSLDIDCDEMISDLAPVDLLIQRAGRLQRHIRDRNGLVKKSGQDERETPVLRILAPEWDDAPRENWLSSAMRNSAYVYPDHGRMWLTQRILREQGTIRMPQSARLLIESVYGEDVNMPVGFAKTEQLQEGKFYCDRAFAGQMLLNFAPGYCAEISDSLPEKMSTRLAEESVTLWLAKIVDSVVTPYASGEHAWEMSVLRVRQSWWNKHKDEFEKLDGEPLRKWCAQQHQDKDFATVIVVTDFAACGYSANEGLIGMMGE
>NZ_CP046283.1|WP_001145543.1|758310_759264_-|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMEVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGSKMTWHPELLQESISTLRKEVTGNAQIKTAVYEMMRPAEAPDHPLVEWQDSLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFSEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLT
>NZ_CP046283.1|WP_000080404.1|757488_758223_+|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVMALAETNAQLEKLSAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNEINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP046283.1|WP_000490481.1|769632_770679_-|aminopeptidase
MFSATRRFAVILALGVGFILPAQAASPGPGEIANTQARHIATFFPGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYTTKDNRKNWHNVTGSTVIAAHEGRVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAARLKDIPTHYGIRFIATSGEEEGKLGAENLLKRMSDAEKKNTLLVINLDNLIVGDKLYFNSGKNTPEAVRTLTRDRALAIARRYGIAANTNPGRNPSYPKGTGCCNDAEVFDKAGISVLSVEATNWNLGKKDGYQQRVKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKELAKAEKTS
>NZ_CP046283.1|WP_000372384.1|770929_771838_+|sulfate-adenylyltransferase-subunit-CysD
MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTANAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF
>NZ_CP046283.1|WP_001092263.1|771847_773287_+|sulfate-adenylyltransferase-subunit-CysN
MNTILAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTERRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYREETFARIREDYLTFAEQLPGDLDIRFVPLSALEGDNVAAQSANMRWYSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPSGVESSVARIVTFDGDKEEACAGEAITLVLNDDIDISRGDLLLAANETLAPARHAAIDVVWMAEQPLAPGQSYDVKLAGKKTRARIEAIRYQIDINNLTQRDVESLPLNGIGLVEMTFDEPLALDIYQQNPVTGGLIFIDRLSNVTVGAGMVRELDERGATPPVEYSAFELELNALVRRHFPHWDARDLLGDKHGAA
>NZ_CP046283.1|WP_001173663.1|773273_773879_+|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVAAREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPQVHLNGEQLVTNLVSQLLDLLRRRDIIRS
>NZ_CP046283.1|WP_000517480.1|774442_774754_+|cell-division-protein-FtsB
MGKLTLLLLALLVWLQYSLWFGKNGIHDYSRVNDDVVAQQATNAKLKARNDQLFAEIDDLNGGQEAIEERARNELSMTKPGETFYRLVPDASKRAATAGQTHR
>NZ_CP046283.1|WP_000741650.1|774772_775483_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MAATLLDVCAVVPAAGFGRRMQTECPKQYLSIGNKTILEHSVHALLAHPRVTRVVIAISPGDHRFAQLPLANHPQITVVDGGNERADSVLAGLQAVAKAQWVLVHDAARPCLHQDDLARLLAISENSRVGGILASPVRDTMKRGEPGKNAIAHTVERADLWHALTPQFFPRELLYDCLTRALNEGATITDEASALEYCGFHPALVEGRADNIKVTRPEDLALAEFYLTRTIHQEKA
>NZ_CP046283.1|WP_001219245.1|775482_775962_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDEVNVKATTTEKLGFTGRGEGIACEAVALLMKAAK
>NZ_CP046283.1|WP_000134246.1|775958_777008_+|tRNA-pseudouridine(13)-synthase-TruD
MTEFDNLTWLHGKPQGSGLLKANPEDFVVVEDLGFTPDGEGEHILLRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDFSAFQLEGCKVLEYARHKRKLRLGALKGNAFTLVLREISDRRDVETRLQAIRDGGVPNYFGAQRFGIGGSNLQGALRWAQSNAPVRDRNKRSFWLSAARSALFNQIVHQRLKKPDFNQVVDGDALQLAGRGSWFVATSEELPELQRRVDEKELMITASLPGSGEWGTQRAALAFEQDAIAQETVLQSLLLREKVEASRRAMLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAHIAE
>NZ_CP046283.1|WP_001221538.1|776988_777750_+|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFDNGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNGYQHYDTAAAVTCALLRGLSREPLRTGRILNVNVPDLPLAQVKGIRVTRCGSRHPADKVIPQEDPRGNTLYWIGPPGDKYDAGPDTDFAAVDEGYVSVTPLHVDLTAHSAHDVVSDWLDSVGVGTQW
>NZ_CP046283.1|WP_000253545.1|777743_778370_+|protein-L-isoaspartate(D-aspartate)-O-methyltransferase
MVSGRVQALLEQLRAQGIRDEQVLNALAAVPREKFIDEAFEHKAWENIALPIGQGQTISQPYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHLVHHVCSVERIKGLQWQARRRLKQLDLHNVSTRHGDGWQGWQARAPFDAIIVTAAPPEIPTALMAQLDEGGILVLPVGDEQQFLKRVRRRGGEFIIDTVEAVRFVPLVKGELA

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Crispr_ID: NZ_CP046283_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046283_5

966832-966941

Orphan

Consensus_repeat	Method
TGTCCCACCCTGTACCACTTTTTTTTAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP046283_5

>merge|NZ_CP046283|5|966832-966941|CRISPRCasFinder
TGTCCCACCCTGTACCACTTTTTTTTAATCAAATTCTCTAAGGTGGGACGCTGTAACCCTCGCCAGCTCTGCGTGTACCACTTGTCCCACCCTGTACCACCTTTTTTTAA

>NZ_CP046283|5|5|966832-966941|CRISPRCasFinder
TGTCCCACCCTGTACCACTTTTTTTTAA	TCAAATTCTCTAAGGTGGGACGCTGTAACCCTCGCCAGCTCTGCGTGTACCACT
TGTCCCACCCTGTACCACCTTTTTTTAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046283.1\|WP_001033832.1\|960414_961428_-\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP046283.1\|WP_000533858.1\|978308_979718_-\|TolC-family-outer-membrane-protein	unknown	unknown	gnl\|CDD\|273829
NZ_CP046283.1\|WP_000889011.1\|958917_960120_-\|DUF3883-domain-containing-protein	unknown	unknown	gnl\|CDD\|379021
NZ_CP046283.1\|WP_001542209.1\|973114_973282_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|170049
NZ_CP046283.1\|WP_010989063.1\|972474_973068_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046283.1\|WP_001520307.1\|966958_969028_-\|DUF927-domain-containing-protein	unknown	unknown	gnl\|CDD\|227806
NZ_CP046283.1\|WP_000248794.1\|970891_972085_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376935
NZ_CP046283.1\|WP_001161781.1\|969729_970557_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046283.1\|WP_000973738.1\|962415_962790_-\|PTS-glucitol/sorbitol-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|226254
NZ_CP046283.1\|WP_001520831.1\|965172_966456_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|226459
NZ_CP046283.1\|WP_000776032.1\|958208_958844_+\|3-hexulose-6-phosphate-synthase	unknown	unknown	gnl\|CDD\|132172
NZ_CP046283.1\|WP_000701821.1\|969063_969279_-\|AlpA-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225848
NZ_CP046283.1\|WP_000480483.1\|962786_963308_-\|PTS-sorbitol-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|226253
NZ_CP046283.1\|WP_010989064.1\|964309_965128_-\|DUF4435-domain-containing-protein	unknown	unknown	gnl\|CDD\|373095
NZ_CP046283.1\|WP_010989065.1\|963799_964156_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP046283.1\|WP_001098984.1\|961438_962419_-\|PTS-glucitol/sorbitol-transporter-subunit-IIB	unknown	unknown	gnl\|CDD\|226255
NZ_CP046283.1\|WP_001542208.1\|973295_974360_-\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|170049
NZ_CP046283.1\|WP_010989057.1\|974960_976124_-\|HlyD-family-type-I-secretion-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|130902
NZ_CP046283.1\|WP_000749979.1\|963420_963705_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|225957
NZ_CP046283.1\|WP_000196159.1\|976131_978312_-\|type-I-secretion-system-permease/ATPase	unknown	unknown	gnl\|CDD\|274550

Protein	Function_ID	Function_description	E-value
NZ_CP046283.1\|WP_001033832.1\|960414_961428_-\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	9.77409e-67
NZ_CP046283.1\|WP_000533858.1\|978308_979718_-\|TolC-family-outer-membrane-protein	gnl\|CDD\|273829	TIGR01844, Proteases_secretion_protein_PrtF, type I secretion outer membrane protein, TolC family. Members of this model are outer membrane proteins from the TolC subfamily within the RND (Resistance-Nodulation-cell Division) efflux systems. These proteins, unlike the NodT subfamily, appear not to be lipoproteins. All are believed to participate in type I protein secretion, an ABC transporter system for protein secretion without cleavage of a signal sequence, although they may, like TolC, participate also in the efflux of smaller molecules as well. This family includes the well-documented examples TolC (E. coli), PrtF (Erwinia), and AprF (Pseudomonas aeruginosa). [Protein fate, Protein and peptide secretion and trafficking, Transport and binding proteins, Porins].	5.87074e-128
NZ_CP046283.1\|WP_000889011.1\|958917_960120_-\|DUF3883-domain-containing-protein	gnl\|CDD\|379021	pfam13020, DUF3883, Domain of unknown function (DUF3883). This is a domain is uncharacterized. It is found on restriction endonucleases.	8.46376e-16
NZ_CP046283.1\|WP_001542209.1\|973114_973282_-\|hypothetical-protein	gnl\|CDD\|170049	PRK09692, PRK09692, integrase; Provisional.	2.20982e-13
NZ_CP046283.1\|WP_001520307.1\|966958_969028_-\|DUF927-domain-containing-protein	gnl\|CDD\|227806	COG5519, COG5519, Superfamily II helicase and inactivated derivatives [DNA replication, recombination, and repair].	0
NZ_CP046283.1\|WP_000248794.1\|970891_972085_-\|hypothetical-protein	gnl\|CDD\|376935	pfam02810, SEC-C, SEC-C motif. The SEC-C motif found in the C-terminus of the SecA protein, in the middle of some SWI2 ATPases and also solo in several proteins. The motif is predicted to chelate zinc with the CXC and C[HC] pairs that constitute the most conserved feature of the motif. It is predicted to be a potential nucleic acid binding domain.	3.20348e-07
NZ_CP046283.1\|WP_000973738.1\|962415_962790_-\|PTS-glucitol/sorbitol-transporter-subunit-IIA	gnl\|CDD\|226254	COG3731, SrlB, Phosphotransferase system sorbitol-specific component IIA [Carbohydrate transport and metabolism].	5.89598e-59
NZ_CP046283.1\|WP_001520831.1\|965172_966456_-\|AAA-family-ATPase	gnl\|CDD\|226459	COG3950, COG3950, Predicted ATP-binding protein involved in virulence [General function prediction only].	0
NZ_CP046283.1\|WP_000776032.1\|958208_958844_+\|3-hexulose-6-phosphate-synthase	gnl\|CDD\|132172	TIGR03128, RuMP_HxlA, 3-hexulose-6-phosphate synthase. Members of this protein family are 3-hexulose-6-phosphate synthase (HPS), or the HPS domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin. In these species, the enzyme is viewed as a lyase rather than a synthase and is called D-arabino 3-hexulose 6-phosphate formaldehyde lyase. Note that there is some overlap in specificity with the Escherichia coli enzyme 3-keto-L-gulonate 6-phosphate decarboxylase.	4.14833e-98
NZ_CP046283.1\|WP_000701821.1\|969063_969279_-\|AlpA-family-transcriptional-regulator	gnl\|CDD\|225848	COG3311, AlpA, Predicted transcriptional regulator [Transcription].	2.37497e-21
NZ_CP046283.1\|WP_000480483.1\|962786_963308_-\|PTS-sorbitol-transporter-subunit-IIC	gnl\|CDD\|226253	COG3730, SrlA, Phosphotransferase system sorbitol-specific component IIC [Carbohydrate transport and metabolism].	2.29561e-79
NZ_CP046283.1\|WP_010989064.1\|964309_965128_-\|DUF4435-domain-containing-protein	gnl\|CDD\|373095	pfam14491, DUF4435, Protein of unknown function (DUF4435). This presumed domain is functionally uncharacterized. This domain is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 285 and 362 amino acids in length. This domain is sometimes associated with AAA domains.	2.33424e-50
NZ_CP046283.1\|WP_010989065.1\|963799_964156_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	2.55924e-09
NZ_CP046283.1\|WP_001098984.1\|961438_962419_-\|PTS-glucitol/sorbitol-transporter-subunit-IIB	gnl\|CDD\|226255	COG3732, SrlE, Phosphotransferase system sorbitol-specific component IIBC [Carbohydrate transport and metabolism].	1.31232e-179
NZ_CP046283.1\|WP_001542208.1\|973295_974360_-\|tyrosine-type-recombinase/integrase	gnl\|CDD\|170049	PRK09692, PRK09692, integrase; Provisional.	1.47537e-117
NZ_CP046283.1\|WP_010989057.1\|974960_976124_-\|HlyD-family-type-I-secretion-periplasmic-adaptor-subunit	gnl\|CDD\|130902	TIGR01843, Hemolysin_secretion_protein_D_plasmid, type I secretion membrane fusion protein, HlyD family. Type I secretion is an ABC transport process that exports proteins, without cleavage of any signal sequence, from the cytosol to extracellular medium across both inner and outer membranes. The secretion signal is found in the C-terminus of the transported protein. This model represents the adaptor protein between the ATP-binding cassette (ABC) protein of the inner membrane and the outer membrane protein, and is called the membrane fusion protein. This model selects a subfamily closely related to HlyD; it is defined narrowly and excludes, for example, colicin V secretion protein CvaA and multidrug efflux proteins. [Protein fate, Protein and peptide secretion and trafficking].	3.18004e-97
NZ_CP046283.1\|WP_000749979.1\|963420_963705_-\|transcriptional-regulator	gnl\|CDD\|225957	COG3423, Nlp, Predicted transcriptional regulator [Transcription].	5.31271e-38
NZ_CP046283.1\|WP_000196159.1\|976131_978312_-\|type-I-secretion-system-permease/ATPase	gnl\|CDD\|274550	TIGR03375, type_I_sec_LssB, type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	0

>NZ_CP046283.1|WP_001520831.1|965172_966456_-|AAA-family-ATPase
MELRRISVNNLFGILNYDIDLGNSETIIITGPNGYGKTMLLKIIDNILNKNIDFFFDLRFEEIKFELDTILLCIEKQKNKNVAVTVVDYVNDKKRQEVFTLNKNKELDVDYFDEIYNKLLICDNIDSDPILKSYNHEEILNYYKIKKIKLHKEKHHKSDFLDKSIPNAELTFIKAQRIENIKNEKSAIESQANFLLELIKRAAEESAQISQRLDSTFPARLFDSINENISSTSINDRLIGIQRKRELFMKFGIIKSEDTFIPRKFSNATLGKEYSTVLNLYISDALEKLSPYEELFEKINLFVNLLNEKMLAFKEIKISNEHGFYFQSDNGERISLSNLSSGEQNQIVIYFDLIFKAKQNSVILIDEPEISLHVAWQKEFLDSIARIQKLNEFSKIIIATHSPQIVNNNWDITYDLFENNNKNMEGQ
>NZ_CP046283.1|WP_010989064.1|964309_965128_-|DUF4435-domain-containing-protein
MLLLFRSPKYSRKIFFTLEGESDIRFLNTHFADERIHYDSPCSGKPEVINAVQLLRSHGKQNVYGLCDADFDILEGNSYENIHFTDCHDLEMMLIEGGSFDKFISEFLKTSILRIHTLEDIRNNLKESIIDVTYKIGILKWLNFKNNLLLMFKGMKYDNFITFVDFSANIDIDNYIQHILDRSPRKPPHCDFNFLKKEYQLLYNKQADYKYVCNGHDFTYITMMAFHSEFSRDKNITQEKVESHLRIAYSATAFQRTNIYNELSGLIDSHNI
>NZ_CP046283.1|WP_010989065.1|963799_964156_+|helix-turn-helix-transcriptional-regulator
MPEDGCCPERDNSCMFRCRIAIVIGKRLKISRVRADLTQAELGALAGLDEESASARISSYEKEVHAPDFKLVCKLAAALDVPEAYFYAVDDELAELILQYHRFKKNNPGSTLILSGNI
>NZ_CP046283.1|WP_000749979.1|963420_963705_-|transcriptional-regulator
MKKSTTKDWHPADIVAALHKRGTSLAKLSREAGLASSTLSNTLTRPWPKGEWLIAIALDMHPSEIWPGRYLNSSNKREPRKPLHPMTTTDNSGT
>NZ_CP046283.1|WP_000480483.1|962786_963308_-|PTS-sorbitol-transporter-subunit-IIC
MFLVSLAEGFIHLFQAAGKIFLDMMTGLIPMLICLLLAINFLMKLVGTVRMEKVAALLGRSRILTYGVLPVLGWFFMSSPGALTLGKLLPEKSKPGYEDALGTTAHPLTSLFPHVVPSELFVWLGVAAGVKALGLPVTSLALRYIAAAMLIGLIRGIITEYLFLRLSRRGNAP
>NZ_CP046283.1|WP_000973738.1|962415_962790_-|PTS-glucitol/sorbitol-transporter-subunit-IIA
MMIYCARITAIGLFVADGLTDKMLITFDSNGPKDCLDYSLSLEPSFREESLMILPGDRLLLAGHDYLVTAVGKGVQQALFELGHLTLVFDGDLKPCHTGAIHLSGPVPKLHDLHGNLVIEEGRP
>NZ_CP046283.1|WP_001098984.1|961438_962419_-|PTS-glucitol/sorbitol-transporter-subunit-IIB
MNTVLIPPGPGGYGKGLWLPVASGKKVLSLTGREIHPVAIEIGALTESEVVNGFSDIPPDNDILCVVINCAGSLRCGLYPQKGIPTINVLPTWRAGPLAQFISEDNYVSGVTIEQLVLVDTAEAPDGEPEPVSVTAPRIITTPPPARGAEKLVRMVERTGTAVGHVIALLFAASREAVDVSLRNVIPFMAFVSLLIALVQETALGSLIAHALTPLANSLWGLVLLSLICGIPFLSPVLGPGAAISQVIGVMIGTQIGAGAISPAFALPALFAINVQVGCDFVPVGLSMQEAKPETIAKGVPAFLLSRQLTGPLAVIIGWLFSLGLF
>NZ_CP046283.1|WP_001033832.1|960414_961428_-|Gfo/Idh/MocA-family-oxidoreductase
MNKIRAAVVGAGIYGKHHMNAYRHNPDTVLVAICDTDTERCDDLAMAYGIQGYTRLDRLLQQEAIDIVSVATPDPYHTESILTALRHGQHVLAEKPLATSVRECELIVEMAQQRDLLVGVDFHKRWDPAVMRIKAELENPETGCILRGHISMDDVITVPTQWLNWAGASSPVWFLGSHCFDLVRHLSGQEVVSVYAVGQKRLMVECGLDTFDSVQSLLTMADGSSWGVENSWVLPEGFPKDNDGRIDILCEATYIRSTSQHRGLEITTPALTLTPNSYFINYRNGVASGFGIDPINDFVRAVRHKAPYPVTAEDGLAVSRICEAVHRSLESGKPEDV
>NZ_CP046283.1|WP_000889011.1|958917_960120_-|DUF3883-domain-containing-protein
MLEFHNVPLKTILRRAIMSLPTNFNDILRFFEKDYDTAKEDNALSARGQFLQLYPLNHLKKMTLDDYVIGKGTASFCACVEVKTRTWANMQGATALKFGIYYGKSKSDPTVRYRFTQKFGDDDSTNKEVFANVKDALLDLIQSGKELDFRAIDENPLSQMFKAKILSLYFPEHFINICSKDHLKEIAMEMGIKEQQFISKYQHLLFKKKLEHKITRNWSNPKYMSFLYAQFIRKDLSSAPAVIVKKPQKRNHPEVNFEEITDNRDLIGKKSEEYALNWEKNRLIGLGYSKLAEEIDDRRNRPTYGYDFLSFNAPGDERYIEVKSIGRDGKEGAFRFFLSENELTVSNLSNHSKNYYFYLVQYGKDGEPCNLYVKHAQDLYTNSEMSPCAYVVRFDLEEPA
>NZ_CP046283.1|WP_000776032.1|958208_958844_+|3-hexulose-6-phosphate-synthase
MKLQLALDELTLPEAMVFMDKVVDDVDIIEVGTPFLIREGVNAIKAIKEKYPHKEVLADAKIMDGGHFESQLLFDAGADYVTVLGVTDVLTIQSCIRAAKEAGKQVVVDMICVDDLPARVRLLEEAGADMLAVHTGTDQQAAGRKPIDDLITMLKVRRKARIAVAGGISSQTVKDYALLGPDVVIVGSAITHAADPAGEARKISQVLLQHH
>NZ_CP046283.1|WP_001520307.1|966958_969028_-|DUF927-domain-containing-protein
MKRAPFLCKQSPDRTLEVVILAGSLAWETSRVWRKDPDREDDVPPMVLGPNELADLSNLTIIRPDTLYVRVLRTGDISEEDLLKIAVKLAHAGVQMARLMSPDGELLENWTGQLERLRQERPSDILPDHFRLDEEALWFDKLTERRDGESDVQPQRICSPLRVTAITCDSHDGSYGRLLEWHTTTGQLRRWAMPMAMLSGNGEELRRILLENGLTNISTRPALRSLLCEYISRSLPGRRVTCVEKTGWHNGVYVLPDEVIGPDGDNVILQGSHYLTGGFAQAGTLAEWQEQVAALCAGNSRLVFAVCCALAAPLLRLTGTGGGGFHLRGESTDGKTTVMKVAASVCGGTDYWHSWRATGNALEGIASRHNDALLPLDELREVDPREAGMIAYMLANGQGKGRARTDGEVRNRRHWTLLLFSTGELSLAEHTERAGERIYAGMDVRMVQIPSDTGQHGAFEQLHGFASGQQFADTLCDRVARFHGTAFRAWLAFLTHDQDASTTLARELLRRYQNALMPDNAGNQVQRIVARFALLAAAGEIATLHGITGWQKGTAYEAVQICLHAWLNERGHIANQEDEGVLAQIKRFITAHQYSRFASWDGPDRPLNMAGFRRVEKDPLTGEEHTLFFILPEGWREICRGFSPARAARLCQEAECLQPGSDGKYQSQVRLPEIGKTRVYRLTSRILSI
>NZ_CP046283.1|WP_000701821.1|969063_969279_-|AlpA-family-transcriptional-regulator
MKIRADSNDAFPESGNVRMRQVVQFLAMSESSVYRLIKDTDFPRPVHLSSRLVVFDAAEIRQWQQRRTVIR
>NZ_CP046283.1|WP_001161781.1|969729_970557_+|hypothetical-protein
MQGLTMDDISLSIARNMFHLQVYESDGVRFEDLFSKIMYYKSPDFQQVKPYGNIGDRKNDGFIKGQGVYYQVYAPEDASNNVLAAVNKIKDDFEGLRDYWHDICPIKKYYFVLNDKYKGSLPQLHKELIVLQSDFNLIDTGVIVAKDLERELFNLPDDMIRSVVGHLPDIDHEEYMFVSGFTCFISAWINFEKIARHKVFSAKQPNRPLFIGKVVNALVKNKIISRQDATFIKKITEVRNSLVHGVSMLVPKKNEIDMLIFITEKIKPAGVCRLD
>NZ_CP046283.1|WP_000248794.1|970891_972085_-|hypothetical-protein
MVNYPYFSVNVLSGSINFVENDKVKLGRNDKCWCKSGLKYKKCHLDRDREMPVSKAEALKFSKSNSQRKACYAPASMHEDCDKRIVQAHTLSKSSSLKAIADSSNHVMGVVMNLPSLIKNNGRWVPEKIGINQASTFTGFCAVHDRILFSCLENEKFTGTDEQCFALMFRSLSKEIYAKEGGRRSSDFAKNADKGKLQAEQVYIQEFVSLHQSGLNAAITELNNLKTSLDRILLNRQFSEIESVVFTFSEPLPIAVSSILSPERDFDGTKIQDLNDLTVSAEQVCFNAFSSEGKGYVVFSWLGTSAIIRRFVRSLIKVQTDRIFNTLLYFFFTKAENTYSSPEWWDSLSDKQRENIGNMIMSGVDFFDNSTLRVDHSVDYNSAALAEIRYSNSEISS
>NZ_CP046283.1|WP_010989063.1|972474_973068_-|hypothetical-protein
MPLLEARHLALLLLGLDASQPANALPEEHQENYRILHDAISRTIKATGMVSAPANKRMFYADEMFALAWRLIDDELTPSEVKDRSLKAVMKLSRNSRGRKWLKTLGDDALPDLTASTQPSLRGMHKRDKARENTARLCWLLVQLLVEETDGRYGTSDKPASDQILRKLKTLAKEQELPSDGLGRGTFYEVLKMEREK
>NZ_CP046283.1|WP_001542209.1|973114_973282_-|hypothetical-protein
MLAHQKEDEIEAAYNRSDYLEQRRPLMQWWGNYVDAARRQALLGAEEPLQIVEGE
>NZ_CP046283.1|WP_001542208.1|973295_974360_-|tyrosine-type-recombinase/integrase
MPNQLKPLTNVEIAGAKPRSTDYELRDGEGLYLLVKTSGRKAWHFEYYHPVTKKRTKTSLGPYPVVTLAMARETRTKYRRLLYQGIDPRQHLAGIAEEKRIQNECTLEKVAEQWLKEKKRTSDLSEDHAKDVWRSLEMHVFPSLGNTPVTEIRPKMLKEHLTPLEEQGILETLRRVISRLNEIFRFAISEELIEFNPADNLVARFKKPKKQNMPALHPSELGRLMLALQNASIRKETRCLIEWELLTWVRPGEAVSARWCDIDMKKAEWRIPDTFMKMNRSHTVPLSKQALRVLQIMEPVSRHRPWVFPSIRKPLEHMHQQTANAALIRMGFGGELVAHGMRSRQDRRRRSFSP
>NZ_CP046283.1|WP_010989057.1|974960_976124_-|HlyD-family-type-I-secretion-periplasmic-adaptor-subunit
MDDPDIQRERAFSGAGRIVLICSLLFLILGIWAWFGRLDEVSTGNGKVIPSSREQVLQSLDGGILAQLTVREGDRVQANQIVARLDPTRLASNVGESAAKYRASLASSARLTAEVNDLPLAFPAELNGWPDLIAAETRLYKSRRAQLADTEAELRDALASVNKELAITQRLEKSGAASHVEVLRLQRQKSDLGLKITDLRSQYYVQAREALSKANAEVDMLSAILKGREDSVTRLTVRSPVRGIVKNIQVTTIGGVIPPNGEMMEIVPVDDRLLIETRLSPRDIAFIHPGQRALVKITAYDYAIYGGLDGVVETISPDTIQDKVKPEIFYYRVFIRTHQDYLQNKSGRRFSIVPGMIATVDIKTGEKTIVDYLIKPFNRAKEALRER
>NZ_CP046283.1|WP_000196159.1|976131_978312_-|type-I-secretion-system-permease/ATPase
MTRAAPDVEEVLSERALSQWAQAISYVAGHYRVACSPGSIQANAPWLRGKSRTTALTQLARQAGLSFHAPDIDKTAFSQWRLPLVVELRDGQLLVIEHVNGEEAVDVFVIEEEGQRNRLTLSELLPEILYVAALRPLSALKDSRVDRYISRFKPDWMRELVLQDIRPYLPVMVAAFLINVLSLAGIVFSMQVYDRVIPAQSYPTLYVLSFGVLVAVLFGFLLREARTHIMDVLGKRADMRISDRVFGHALRLRNSAIPRSTGSFISQLRELEQIREMITSSTLATIVDLPFFFLFMIVLAIIAPPLAWIAPVAALLMILPGVALQKKLAVLANQAAHEATLRNAVLVESVQGLEDIKLMQAENRFLQQWNSYIRITGESGLRTRKLTQGLISWGMSVQSLVYAAVIMFGAPMVIEGSMTTGAVVAASMLGSRMIAPMANLCGVLARWQQVKAAKMGLDNIMQLPTETQHDDSLIHRDILHGHYLFENAQFRYHNDDQRIPLRLVRLEIMPGERIAILGRNGAGKSTLLQAMAGGLEMIQGDARLDNLSLSHIDMADLRRNIGFLSQNARLFFGTLRENLTLGAPHANDEQIFDALEVSGGAVFVRRLAKGLDHPIMEGGNGLSGGQRQSLLLARMLLRSPNIVLLDEPSASLDEHTEREFIQRLHQWLGNRTLVVATHRVPILELVERVVVLKEGQLVMDAPKAQALNADRMQSHRREWKNENQSA
>NZ_CP046283.1|WP_000533858.1|978308_979718_-|TolC-family-outer-membrane-protein
MGRVAPVAIVLAFALFHHQPRGAEAPPMITSEGLATDQMLPSLDGSAAELPLSAAAPGNLTLNDAVNRAVNWHPSIREAIGKLLAQNEQIEVAKSKYYPQVSAGVNNGYSNTYTDHGYSPSLVLSVSQMLYDFGKVASQVRAETAGAAQQQANVLLSIDTVAHETANAIVQTQSWQQMVEAAEEQLVALDSIGKLIRQRSDEGATSLSDVVQTEARIESARSQLAQYQANLDSAKASLMSWLGWNSLNGINNDFPAKLARSCETATPDDRLVPAVLAAWAQANVARANLDYASAQMTPTISLEPSVQHYLNDKYPSHEVLDKTQYSTWVKVEMPLYQGGGLTARRNAASHAVDAAQSTIQRTRLDVRQKLMEARSQAMSLASALQILRRQQQLSERTRELYQQQYLDLGSRPLLDVLNAEQEVYQARFAELQTESQLHQLQLNCLYNTGALRQAFALNHRSIQSVEIQP

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP046283_2	2.16\|751829\|32\|NZ_CP046283\|CRISPRCasFinder,CRT,PILER-CR	751829-751860	32	NZ_CP034699	Salmonella enterica subsp. enterica serovar Karamoja strain RSE40 plasmid pRSE40, complete sequence	177960-177991	1	0.969
NZ_CP046283_2	2.16\|751829\|32\|NZ_CP046283\|CRISPRCasFinder,CRT,PILER-CR	751829-751860	32	NZ_CP034710	Salmonella enterica subsp. enterica serovar Karamoja strain RSE21 plasmid pRSE21, complete sequence	67131-67162	1	0.969
NZ_CP046283_3	3.11\|768905\|32\|NZ_CP046283\|PILER-CR,CRISPRCasFinder,CRT	768905-768936	32	CP051275	Salmonella phage SW-37, complete genome	24295-24326	1	0.969
NZ_CP046283_3	3.11\|768905\|32\|NZ_CP046283\|PILER-CR,CRISPRCasFinder,CRT	768905-768936	32	KC139516	Salmonella phage FSL SP-016, partial genome	43971-44002	1	0.969
NZ_CP046283_3	3.11\|768905\|32\|NZ_CP046283\|PILER-CR,CRISPRCasFinder,CRT	768905-768936	32	JQ182729	Enterobacterial phage mEp390, complete genome	23951-23982	3	0.906
NZ_CP046283_2	2.2\|751099\|28\|NZ_CP046283\|PILER-CR	751099-751126	28	NC_028940	Pectobacterium bacteriophage PM2, complete genome	79089-79116	5	0.821
NZ_CP046283_2	2.7\|751279\|32\|NZ_CP046283\|CRISPRCasFinder,CRT,PILER-CR	751279-751310	32	CP023013	Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence	1387347-1387378	5	0.844
NZ_CP046283_2	2.7\|751279\|32\|NZ_CP046283\|CRISPRCasFinder,CRT,PILER-CR	751279-751310	32	NZ_CP022766	Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence	1461559-1461590	5	0.844
NZ_CP046283_2	2.7\|751279\|32\|NZ_CP046283\|CRISPRCasFinder,CRT,PILER-CR	751279-751310	32	CP023015	Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence	599340-599371	5	0.844
NZ_CP046283_2	2.2\|751099\|28\|NZ_CP046283\|PILER-CR	751099-751126	28	NZ_CP042995	Acinetobacter nosocomialis strain J1A plasmid unnamed1, complete sequence	68699-68726	6	0.786
NZ_CP046283_2	2.2\|751099\|28\|NZ_CP046283\|PILER-CR	751099-751126	28	NZ_CP038501	Acinetobacter baumannii strain CIAT758 plasmid unnamed1, complete sequence	49133-49160	6	0.786
NZ_CP046283_2	2.2\|751099\|28\|NZ_CP046283\|PILER-CR	751099-751126	28	NZ_CP026129	Acinetobacter baumannii strain ABNIH28 plasmid pABA-2f10, complete sequence	43952-43979	6	0.786
NZ_CP046283_2	2.2\|751099\|28\|NZ_CP046283\|PILER-CR	751099-751126	28	NZ_CP046044	Acinetobacter towneri strain 19110F47 plasmid p19110F47-2, complete sequence	66633-66660	6	0.786
NZ_CP046283_2	2.2\|751099\|28\|NZ_CP046283\|PILER-CR	751099-751126	28	NZ_CP048015	Acinetobacter towneri strain 205 plasmid pAT205, complete sequence	147169-147196	6	0.786
NZ_CP046283_2	2.7\|751279\|32\|NZ_CP046283\|CRISPRCasFinder,CRT,PILER-CR	751279-751310	32	NC_012528	Deinococcus deserti VCD115 plasmid 3, complete sequence	121315-121346	6	0.812
NZ_CP046283_3	3.9\|768783\|32\|NZ_CP046283\|PILER-CR,CRISPRCasFinder,CRT	768783-768814	32	MT774487	Salmonella phage MG40, complete genome	21746-21777	6	0.812
NZ_CP046283_2	2.7\|751279\|32\|NZ_CP046283\|CRISPRCasFinder,CRT,PILER-CR	751279-751310	32	NZ_CP044078	Paracoccus yeei strain FDAARGOS_643 plasmid unnamed1, complete sequence	135155-135186	7	0.781
NZ_CP046283_2	2.7\|751279\|32\|NZ_CP046283\|CRISPRCasFinder,CRT,PILER-CR	751279-751310	32	NZ_CP031081	Paracoccus yeei strain CCUG 32053 plasmid pYEE3, complete sequence	195902-195933	7	0.781
NZ_CP046283_2	2.7\|751279\|32\|NZ_CP046283\|CRISPRCasFinder,CRT,PILER-CR	751279-751310	32	NZ_CP032322	Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence	581076-581107	7	0.781
NZ_CP046283_2	2.7\|751279\|32\|NZ_CP046283\|CRISPRCasFinder,CRT,PILER-CR	751279-751310	32	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	122557-122588	7	0.781
NZ_CP046283_2	2.7\|751279\|32\|NZ_CP046283\|CRISPRCasFinder,CRT,PILER-CR	751279-751310	32	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	529537-529568	7	0.781
NZ_CP046283_2	2.7\|751279\|32\|NZ_CP046283\|CRISPRCasFinder,CRT,PILER-CR	751279-751310	32	NZ_CP034156	Rhodococcus sp. NJ-530 plasmid unnamed4, complete sequence	327444-327475	7	0.781
NZ_CP046283_3	3.5\|768539\|32\|NZ_CP046283\|PILER-CR,CRISPRCasFinder,CRT	768539-768570	32	NZ_CP024773	Bacillus thuringiensis LM1212 plasmid pLM2, complete sequence	29048-29079	7	0.781
NZ_CP046283_3	3.5\|768539\|32\|NZ_CP046283\|PILER-CR,CRISPRCasFinder,CRT	768539-768570	32	NZ_CP041075	Bacillus tropicus strain LM1212-W3 plasmid p2, complete sequence	142294-142325	7	0.781
NZ_CP046283_3	3.7\|768661\|32\|NZ_CP046283\|PILER-CR,CRISPRCasFinder,CRT	768661-768692	32	NZ_CP054841	Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence	535406-535437	7	0.781
NZ_CP046283_3	3.9\|768783\|32\|NZ_CP046283\|PILER-CR,CRISPRCasFinder,CRT	768783-768814	32	JQ288021	Salmonella phage SPN3UB, complete genome	39452-39483	7	0.781
NZ_CP046283_3	3.9\|768783\|32\|NZ_CP046283\|PILER-CR,CRISPRCasFinder,CRT	768783-768814	32	MH370364	Salmonella phage S107, complete genome	29959-29990	7	0.781
NZ_CP046283_3	3.9\|768783\|32\|NZ_CP046283\|PILER-CR,CRISPRCasFinder,CRT	768783-768814	32	MH370382	Salmonella phage S135, complete genome	29959-29990	7	0.781
NZ_CP046283_3	3.9\|768783\|32\|NZ_CP046283\|PILER-CR,CRISPRCasFinder,CRT	768783-768814	32	MH370383	Salmonella phage S137, complete genome	29959-29990	7	0.781
NZ_CP046283_4	4.1\|769131\|32\|NZ_CP046283\|PILER-CR,CRISPRCasFinder,CRT	769131-769162	32	NZ_CP013929	Alteromonas mediterranea strain UM8 plasmid pAMEDUM8_300, complete sequence	188177-188208	7	0.781
NZ_CP046283_4	4.1\|769131\|32\|NZ_CP046283\|PILER-CR,CRISPRCasFinder,CRT	769131-769162	32	CP013931	Alteromonas mediterranea strain U10 plasmid pAMED10_300, complete sequence	192938-192969	7	0.781
NZ_CP046283_4	4.1\|769131\|32\|NZ_CP046283\|PILER-CR,CRISPRCasFinder,CRT	769131-769162	32	NC_019394	Alteromonas mediterranea DE1 plasmid pAMDE1, complete sequence	188204-188235	7	0.781
NZ_CP046283_2	2.4\|751096\|32\|NZ_CP046283\|CRISPRCasFinder,CRT	751096-751127	32	NC_028940	Pectobacterium bacteriophage PM2, complete genome	79087-79118	8	0.75
NZ_CP046283_2	2.5\|751157\|32\|NZ_CP046283\|CRISPRCasFinder,CRT	751157-751188	32	NZ_CP014942	Rhodococcus sp. BH4 plasmid, complete sequence	462005-462036	8	0.75
NZ_CP046283_2	2.13\|751646\|32\|NZ_CP046283\|CRISPRCasFinder,CRT,PILER-CR	751646-751677	32	CP024685	Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-1-490K, complete sequence	135469-135500	8	0.75
NZ_CP046283_2	2.13\|751646\|32\|NZ_CP046283\|CRISPRCasFinder,CRT,PILER-CR	751646-751677	32	NZ_CP031801	Klebsiella pneumoniae strain MSB1_8A-sc-2280397 plasmid unnamed1, complete sequence	11654-11685	8	0.75
NZ_CP046283_3	3.6\|768600\|32\|NZ_CP046283\|PILER-CR,CRISPRCasFinder,CRT	768600-768631	32	NZ_CP016179	Vibrio breoganii strain FF50 plasmid unnamed1, complete sequence	203354-203385	8	0.75
NZ_CP046283_4	4.7\|769497\|32\|NZ_CP046283\|PILER-CR,CRISPRCasFinder,CRT	769497-769528	32	MN855803	Bacteriophage sp. isolate 108, partial genome	10057-10088	8	0.75
NZ_CP046283_2	2.8\|751340\|32\|NZ_CP046283\|CRISPRCasFinder,CRT,PILER-CR	751340-751371	32	NZ_CP021372	Rhizobium sp. ACO-34A plasmid pRACO34Ad, complete sequence	353298-353329	9	0.719
NZ_CP046283_2	2.8\|751340\|32\|NZ_CP046283\|CRISPRCasFinder,CRT,PILER-CR	751340-751371	32	AM749121	Streptococcus phage M102 complete genome	7893-7924	9	0.719
NZ_CP046283_2	2.8\|751340\|32\|NZ_CP046283\|CRISPRCasFinder,CRT,PILER-CR	751340-751371	32	NC_012884	Streptococcus phage M102, complete genome	7893-7924	9	0.719
NZ_CP046283_2	2.11\|751523\|32\|NZ_CP046283\|CRISPRCasFinder,CRT,PILER-CR	751523-751554	32	MN693046	Marine virus AFVG_25M413, complete genome	4323-4354	9	0.719
NZ_CP046283_2	2.11\|751523\|32\|NZ_CP046283\|CRISPRCasFinder,CRT,PILER-CR	751523-751554	32	MN693008	Marine virus AFVG_117M9, complete genome	4316-4347	9	0.719
NZ_CP046283_3	3.9\|768783\|32\|NZ_CP046283\|PILER-CR,CRISPRCasFinder,CRT	768783-768814	32	MK448228	Klebsiella phage ST15-VIM1phi2.1, complete genome	32866-32897	9	0.719
NZ_CP046283_2	2.4\|751096\|32\|NZ_CP046283\|CRISPRCasFinder,CRT	751096-751127	32	NZ_CP042995	Acinetobacter nosocomialis strain J1A plasmid unnamed1, complete sequence	68697-68728	10	0.688
NZ_CP046283_2	2.4\|751096\|32\|NZ_CP046283\|CRISPRCasFinder,CRT	751096-751127	32	NZ_CP026129	Acinetobacter baumannii strain ABNIH28 plasmid pABA-2f10, complete sequence	43950-43981	10	0.688
NZ_CP046283_2	2.4\|751096\|32\|NZ_CP046283\|CRISPRCasFinder,CRT	751096-751127	32	NZ_CP038501	Acinetobacter baumannii strain CIAT758 plasmid unnamed1, complete sequence	49131-49162	10	0.688
NZ_CP046283_2	2.4\|751096\|32\|NZ_CP046283\|CRISPRCasFinder,CRT	751096-751127	32	NZ_CP046044	Acinetobacter towneri strain 19110F47 plasmid p19110F47-2, complete sequence	66631-66662	10	0.688
NZ_CP046283_2	2.4\|751096\|32\|NZ_CP046283\|CRISPRCasFinder,CRT	751096-751127	32	NZ_CP048015	Acinetobacter towneri strain 205 plasmid pAT205, complete sequence	147167-147198	10	0.688
NZ_CP046283_2	2.9\|751401\|32\|NZ_CP046283\|CRISPRCasFinder,CRT,PILER-CR	751401-751432	32	NZ_CP030264	Ensifer adhaerens strain Corn53 plasmid AB, complete sequence	1134787-1134818	10	0.688
NZ_CP046283_2	2.17\|751890\|32\|NZ_CP046283\|CRISPRCasFinder,CRT,PILER-CR	751890-751921	32	NZ_CP044072	Pseudomonas oryzihabitans strain FDAARGOS_657 plasmid unnamed1, complete sequence	99817-99848	10	0.688
NZ_CP046283_2	2.20\|752073\|32\|NZ_CP046283\|CRISPRCasFinder,CRT	752073-752104	32	NZ_CP054615	Azospirillum oryzae strain KACC 14407 plasmid unnamed1, complete sequence	146919-146950	10	0.688
NZ_CP046283_3	3.11\|768905\|32\|NZ_CP046283\|PILER-CR,CRISPRCasFinder,CRT	768905-768936	32	NZ_AP022571	Mycolicibacterium poriferae strain JCM 12603 plasmid pJCM12603, complete sequence	153476-153507	10	0.688
NZ_CP046283_4	4.8\|769558\|32\|NZ_CP046283\|CRISPRCasFinder,CRT	769558-769589	32	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	1151729-1151760	10	0.688
NZ_CP046283_4	4.8\|769558\|32\|NZ_CP046283\|CRISPRCasFinder,CRT	769558-769589	32	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	661429-661460	10	0.688

1. spacer 2.16|751829|32|NZ_CP046283|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034699 (Salmonella enterica subsp. enterica serovar Karamoja strain RSE40 plasmid pRSE40, complete sequence) position: , mismatch: 1, identity: 0.969

ggatatgtgaagttcaggtagcccattacgca	CRISPR spacer
ggatatgtgaagttcaggtagcccactacgca	Protospacer
*************************.******

2. spacer 2.16|751829|32|NZ_CP046283|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034710 (Salmonella enterica subsp. enterica serovar Karamoja strain RSE21 plasmid pRSE21, complete sequence) position: , mismatch: 1, identity: 0.969

ggatatgtgaagttcaggtagcccattacgca	CRISPR spacer
ggatatgtgaagttcaggtagcccactacgca	Protospacer
*************************.******

3. spacer 3.11|768905|32|NZ_CP046283|PILER-CR,CRISPRCasFinder,CRT matches to CP051275 (Salmonella phage SW-37, complete genome) position: , mismatch: 1, identity: 0.969

ccacgttcggcgatgttggccccatcggtcca	CRISPR spacer
ccacgttcggcgatgttggccccatcggtccg	Protospacer
*******************************.

4. spacer 3.11|768905|32|NZ_CP046283|PILER-CR,CRISPRCasFinder,CRT matches to KC139516 (Salmonella phage FSL SP-016, partial genome) position: , mismatch: 1, identity: 0.969

ccacgttcggcgatgttggccccatcggtcca	CRISPR spacer
ccacattcggcgatgttggccccatcggtcca	Protospacer
****.***************************

5. spacer 3.11|768905|32|NZ_CP046283|PILER-CR,CRISPRCasFinder,CRT matches to JQ182729 (Enterobacterial phage mEp390, complete genome) position: , mismatch: 3, identity: 0.906

ccacgttcggcgatgttggccccatcggtcca	CRISPR spacer
ctacgttcggtgatgttggccccataggtcca	Protospacer
*.********.************** ******

6. spacer 2.2|751099|28|NZ_CP046283|PILER-CR matches to NC_028940 (Pectobacterium bacteriophage PM2, complete genome) position: , mismatch: 5, identity: 0.821

tcattaaataactatataacccccggac	CRISPR spacer
tcattaaataactatataacacacgaga	Protospacer
******************** * **..

7. spacer 2.7|751279|32|NZ_CP046283|CRISPRCasFinder,CRT,PILER-CR matches to CP023013 (Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.844

gatcgggtggtgccggtgggccatgtggcgct-	CRISPR spacer
gatcgggtggtgccgctggggcata-gccgctg	Protospacer
*************** **** ***. * ****

8. spacer 2.7|751279|32|NZ_CP046283|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022766 (Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.844

gatcgggtggtgccggtgggccatgtggcgct-	CRISPR spacer
gatcgggtggtgccgctggggcata-gccgctg	Protospacer
*************** **** ***. * ****

9. spacer 2.7|751279|32|NZ_CP046283|CRISPRCasFinder,CRT,PILER-CR matches to CP023015 (Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.844

gatcgggtggtgccggtgggccatgtggcgct-	CRISPR spacer
gatcgggtggtgccgctggggcata-gccgctg	Protospacer
*************** **** ***. * ****

10. spacer 2.2|751099|28|NZ_CP046283|PILER-CR matches to NZ_CP042995 (Acinetobacter nosocomialis strain J1A plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.786

tcattaaataactatataacccccggac	CRISPR spacer
gcattaattaactgtataacccccaaaa	Protospacer
 ****** *****.**********..*

11. spacer 2.2|751099|28|NZ_CP046283|PILER-CR matches to NZ_CP038501 (Acinetobacter baumannii strain CIAT758 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.786

tcattaaataactatataacccccggac	CRISPR spacer
gcattaattaactgtataacccccaaaa	Protospacer
 ****** *****.**********..*

12. spacer 2.2|751099|28|NZ_CP046283|PILER-CR matches to NZ_CP026129 (Acinetobacter baumannii strain ABNIH28 plasmid pABA-2f10, complete sequence) position: , mismatch: 6, identity: 0.786

tcattaaataactatataacccccggac	CRISPR spacer
gcattaattaactgtataacccccaaaa	Protospacer
 ****** *****.**********..*

13. spacer 2.2|751099|28|NZ_CP046283|PILER-CR matches to NZ_CP046044 (Acinetobacter towneri strain 19110F47 plasmid p19110F47-2, complete sequence) position: , mismatch: 6, identity: 0.786

tcattaaataactatataacccccggac	CRISPR spacer
gcattaattaactgtataacccccaaaa	Protospacer
 ****** *****.**********..*

14. spacer 2.2|751099|28|NZ_CP046283|PILER-CR matches to NZ_CP048015 (Acinetobacter towneri strain 205 plasmid pAT205, complete sequence) position: , mismatch: 6, identity: 0.786

tcattaaataactatataacccccggac	CRISPR spacer
gcattaattaactgtataacccccaaaa	Protospacer
 ****** *****.**********..*

15. spacer 2.7|751279|32|NZ_CP046283|CRISPRCasFinder,CRT,PILER-CR matches to NC_012528 (Deinococcus deserti VCD115 plasmid 3, complete sequence) position: , mismatch: 6, identity: 0.812

gatcgggtggtgccggtgggccatgtggcgct--	CRISPR spacer
ggtcgggtggtgcgggtcggcca--tggcgttgg	Protospacer
*.*********** *** *****  *****.*

16. spacer 3.9|768783|32|NZ_CP046283|PILER-CR,CRISPRCasFinder,CRT matches to MT774487 (Salmonella phage MG40, complete genome) position: , mismatch: 6, identity: 0.812

gtcgttcatcaggcactaccggcactttctgg	CRISPR spacer
ccatttcatcaggcactaccggcactggctgg	Protospacer
 .  **********************  ****

17. spacer 2.7|751279|32|NZ_CP046283|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP044078 (Paracoccus yeei strain FDAARGOS_643 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

gatcg--ggtggtgccggtgggccatgtggcgct	CRISPR spacer
--ccgacgctggtggcggtgggccatgtggcggc	Protospacer
  .**  * ***** ***************** .

18. spacer 2.7|751279|32|NZ_CP046283|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031081 (Paracoccus yeei strain CCUG 32053 plasmid pYEE3, complete sequence) position: , mismatch: 7, identity: 0.781

gatcg--ggtggtgccggtgggccatgtggcgct	CRISPR spacer
--ccgacgctggtggcggtgggccatgtggcggc	Protospacer
  .**  * ***** ***************** .

19. spacer 2.7|751279|32|NZ_CP046283|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.781

gatcg-ggtggtgccggtgggccatgtggcgct	CRISPR spacer
-atggcgatggagccgctgggccatgtggcggg	Protospacer
 ** * *.*** **** **************

20. spacer 2.7|751279|32|NZ_CP046283|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 7, identity: 0.781

gatcg-ggtggtgccggtgggccatgtggcgct	CRISPR spacer
-atggcgatggagccgctgggccatgtggcggg	Protospacer
 ** * *.*** **** **************

21. spacer 2.7|751279|32|NZ_CP046283|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.781

gatcg-ggtggtgccggtgggccatgtggcgct	CRISPR spacer
-atggcgatggagccgctgggccatgtggcggg	Protospacer
 ** * *.*** **** **************

22. spacer 2.7|751279|32|NZ_CP046283|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034156 (Rhodococcus sp. NJ-530 plasmid unnamed4, complete sequence) position: , mismatch: 7, identity: 0.781

gatcgggtggtgccggtgggccatgtggcgct	CRISPR spacer
gctagtgccgtgccggtgcgccatgtggggct	Protospacer
* * * *. ********* ********* ***

23. spacer 3.5|768539|32|NZ_CP046283|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024773 (Bacillus thuringiensis LM1212 plasmid pLM2, complete sequence) position: , mismatch: 7, identity: 0.781

ttacgtgtttattcatctgttgcattagattc	CRISPR spacer
attggtgtttcttcatctattgcattagaagc	Protospacer
 *  ****** *******.**********  *

24. spacer 3.5|768539|32|NZ_CP046283|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041075 (Bacillus tropicus strain LM1212-W3 plasmid p2, complete sequence) position: , mismatch: 7, identity: 0.781

ttacgtgtttattcatctgttgcattagattc	CRISPR spacer
attggtgtttcttcatctattgcattagaagc	Protospacer
 *  ****** *******.**********  *

25. spacer 3.7|768661|32|NZ_CP046283|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054841 (Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

acgccccgaatgtgtttgcctcgcccgctgcc	CRISPR spacer
gcgacctgaatgtgtttgcctcgcgccgtggc	Protospacer
.** **.***************** *  ** *

26. spacer 3.9|768783|32|NZ_CP046283|PILER-CR,CRISPRCasFinder,CRT matches to JQ288021 (Salmonella phage SPN3UB, complete genome) position: , mismatch: 7, identity: 0.781

gtcgttcatcaggcactaccggcactttctgg	CRISPR spacer
ccatttcatcaggcactaccggcactggctgc	Protospacer
 .  **********************  ***

27. spacer 3.9|768783|32|NZ_CP046283|PILER-CR,CRISPRCasFinder,CRT matches to MH370364 (Salmonella phage S107, complete genome) position: , mismatch: 7, identity: 0.781

gtcgttcatcaggcactaccggcactttctgg	CRISPR spacer
ccatttcatcaggcactaccggcactggctgc	Protospacer
 .  **********************  ***

28. spacer 3.9|768783|32|NZ_CP046283|PILER-CR,CRISPRCasFinder,CRT matches to MH370382 (Salmonella phage S135, complete genome) position: , mismatch: 7, identity: 0.781

gtcgttcatcaggcactaccggcactttctgg	CRISPR spacer
ccatttcatcaggcactaccggcactggctgc	Protospacer
 .  **********************  ***

29. spacer 3.9|768783|32|NZ_CP046283|PILER-CR,CRISPRCasFinder,CRT matches to MH370383 (Salmonella phage S137, complete genome) position: , mismatch: 7, identity: 0.781

gtcgttcatcaggcactaccggcactttctgg	CRISPR spacer
ccatttcatcaggcactaccggcactggctgc	Protospacer
 .  **********************  ***

30. spacer 4.1|769131|32|NZ_CP046283|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013929 (Alteromonas mediterranea strain UM8 plasmid pAMEDUM8_300, complete sequence) position: , mismatch: 7, identity: 0.781

agccgtttccgctaaatacccc--cgcagtgatt	CRISPR spacer
ccccgatttcgctaaatacccccgcgcagcga--	Protospacer
  *** **.*************  *****.**

31. spacer 4.1|769131|32|NZ_CP046283|PILER-CR,CRISPRCasFinder,CRT matches to CP013931 (Alteromonas mediterranea strain U10 plasmid pAMED10_300, complete sequence) position: , mismatch: 7, identity: 0.781

agccgtttccgctaaatacccc--cgcagtgatt	CRISPR spacer
ccccgatttcgctaaatacccccgcgcagcga--	Protospacer
  *** **.*************  *****.**

32. spacer 4.1|769131|32|NZ_CP046283|PILER-CR,CRISPRCasFinder,CRT matches to NC_019394 (Alteromonas mediterranea DE1 plasmid pAMDE1, complete sequence) position: , mismatch: 7, identity: 0.781

agccgtttccgctaaatacccc--cgcagtgatt	CRISPR spacer
ccccgatttcgctaaatacccccgcgcagcga--	Protospacer
  *** **.*************  *****.**

33. spacer 2.4|751096|32|NZ_CP046283|CRISPRCasFinder,CRT matches to NC_028940 (Pectobacterium bacteriophage PM2, complete genome) position: , mismatch: 8, identity: 0.75

gctcattaaataactatataacccccggactc	CRISPR spacer
tatcattaaataactatataacacacgagagc	Protospacer
  ******************** * **..  *

34. spacer 2.5|751157|32|NZ_CP046283|CRISPRCasFinder,CRT matches to NZ_CP014942 (Rhodococcus sp. BH4 plasmid, complete sequence) position: , mismatch: 8, identity: 0.75

ttccagaaccgtttgacttactgtggccatta	CRISPR spacer
ctgccgaaccgtgtgccttactgtggccaccg	Protospacer
.* * ******* ** *************...

35. spacer 2.13|751646|32|NZ_CP046283|CRISPRCasFinder,CRT,PILER-CR matches to CP024685 (Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-1-490K, complete sequence) position: , mismatch: 8, identity: 0.75

cgtcactttctgacattttattcagttcgtta	CRISPR spacer
attcactatcagacattttattcagttctgcc	Protospacer
  ***** ** *****************  .

36. spacer 2.13|751646|32|NZ_CP046283|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031801 (Klebsiella pneumoniae strain MSB1_8A-sc-2280397 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

cgtcactttctgacattttattcagttcgtta	CRISPR spacer
cgcgcgtgtctgacattgtattcagttcattt	Protospacer
**.   * ********* **********.**

37. spacer 3.6|768600|32|NZ_CP046283|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016179 (Vibrio breoganii strain FF50 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

gaggcgtac-----aggctgttagatgagaaattacc	CRISPR spacer
-----atactaataaggctgtttgatgcgaaattacc	Protospacer
     .***     ******** **** *********

38. spacer 4.7|769497|32|NZ_CP046283|PILER-CR,CRISPRCasFinder,CRT matches to MN855803 (Bacteriophage sp. isolate 108, partial genome) position: , mismatch: 8, identity: 0.75

ggttaaccaggggtttttccccactatttcgc	CRISPR spacer
aggtaacgaggggtttttccccaatattgaaa	Protospacer
.* **** *************** ****  .

39. spacer 2.8|751340|32|NZ_CP046283|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021372 (Rhizobium sp. ACO-34A plasmid pRACO34Ad, complete sequence) position: , mismatch: 9, identity: 0.719

gcagcggttgagtaactcctcgtccacgtcga	CRISPR spacer
ggtgcgggtgaggaactcctcgtccactgaac	Protospacer
*  **** **** **************   .

40. spacer 2.8|751340|32|NZ_CP046283|CRISPRCasFinder,CRT,PILER-CR matches to AM749121 (Streptococcus phage M102 complete genome) position: , mismatch: 9, identity: 0.719

gcagcggttgagtaactcctcgtccacgtcga	CRISPR spacer
aaggcggtggagtaactcctggtccagcccaa	Protospacer
. .***** *********** *****  .*.*

41. spacer 2.8|751340|32|NZ_CP046283|CRISPRCasFinder,CRT,PILER-CR matches to NC_012884 (Streptococcus phage M102, complete genome) position: , mismatch: 9, identity: 0.719

gcagcggttgagtaactcctcgtccacgtcga	CRISPR spacer
aaggcggtggagtaactcctggtccagcccaa	Protospacer
. .***** *********** *****  .*.*

42. spacer 2.11|751523|32|NZ_CP046283|CRISPRCasFinder,CRT,PILER-CR matches to MN693046 (Marine virus AFVG_25M413, complete genome) position: , mismatch: 9, identity: 0.719

gcgaggtcaataaaaaatggtgtggctttacc	CRISPR spacer
ttagggtcaacaaaaaatggtgtggtttcaga	Protospacer
 ...******.**************.**.*

43. spacer 2.11|751523|32|NZ_CP046283|CRISPRCasFinder,CRT,PILER-CR matches to MN693008 (Marine virus AFVG_117M9, complete genome) position: , mismatch: 9, identity: 0.719

gcgaggtcaataaaaaatggtgtggctttacc	CRISPR spacer
ttagggtcaacaaaaaatggtgtggtttcaga	Protospacer
 ...******.**************.**.*

44. spacer 3.9|768783|32|NZ_CP046283|PILER-CR,CRISPRCasFinder,CRT matches to MK448228 (Klebsiella phage ST15-VIM1phi2.1, complete genome) position: , mismatch: 9, identity: 0.719

gtcgttcatcaggcactaccggcactttctgg	CRISPR spacer
tgagttcatccggcactaccggcgctggatgc	Protospacer
   ******* ************.**   **

45. spacer 2.4|751096|32|NZ_CP046283|CRISPRCasFinder,CRT matches to NZ_CP042995 (Acinetobacter nosocomialis strain J1A plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

gctcattaaataactatataacccccggactc	CRISPR spacer
cagcattaattaactgtataacccccaaaaaa	Protospacer
   ****** *****.**********..*

46. spacer 2.4|751096|32|NZ_CP046283|CRISPRCasFinder,CRT matches to NZ_CP026129 (Acinetobacter baumannii strain ABNIH28 plasmid pABA-2f10, complete sequence) position: , mismatch: 10, identity: 0.688

gctcattaaataactatataacccccggactc	CRISPR spacer
cagcattaattaactgtataacccccaaaaaa	Protospacer
   ****** *****.**********..*

47. spacer 2.4|751096|32|NZ_CP046283|CRISPRCasFinder,CRT matches to NZ_CP038501 (Acinetobacter baumannii strain CIAT758 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

gctcattaaataactatataacccccggactc	CRISPR spacer
cagcattaattaactgtataacccccaaaaaa	Protospacer
   ****** *****.**********..*

48. spacer 2.4|751096|32|NZ_CP046283|CRISPRCasFinder,CRT matches to NZ_CP046044 (Acinetobacter towneri strain 19110F47 plasmid p19110F47-2, complete sequence) position: , mismatch: 10, identity: 0.688

gctcattaaataactatataacccccggactc	CRISPR spacer
cagcattaattaactgtataacccccaaaaaa	Protospacer
   ****** *****.**********..*

49. spacer 2.4|751096|32|NZ_CP046283|CRISPRCasFinder,CRT matches to NZ_CP048015 (Acinetobacter towneri strain 205 plasmid pAT205, complete sequence) position: , mismatch: 10, identity: 0.688

gctcattaaataactatataacccccggactc	CRISPR spacer
cagcattaattaactgtataacccccaaaaaa	Protospacer
   ****** *****.**********..*

50. spacer 2.9|751401|32|NZ_CP046283|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030264 (Ensifer adhaerens strain Corn53 plasmid AB, complete sequence) position: , mismatch: 10, identity: 0.688

ctccagcgctcgaatttatttgaggccaccac	CRISPR spacer
gaacaccgcgcgaatttatttgaggcaagttt	Protospacer
   ** *** **************** * . .

51. spacer 2.17|751890|32|NZ_CP046283|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP044072 (Pseudomonas oryzihabitans strain FDAARGOS_657 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

ttgatcgagagtgcgaagaggcagaacgggca	CRISPR spacer
gaaggtggcagtgccaagagacagaacgggca	Protospacer
  .. .*. ***** *****.***********

52. spacer 2.20|752073|32|NZ_CP046283|CRISPRCasFinder,CRT matches to NZ_CP054615 (Azospirillum oryzae strain KACC 14407 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

cgttcatcggcagcgtcacgcaatatgaagat	CRISPR spacer
acatcatcggcatcgtcacgccatatccggca	Protospacer
   ********* ******** ****  .*

53. spacer 3.11|768905|32|NZ_CP046283|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022571 (Mycolicibacterium poriferae strain JCM 12603 plasmid pJCM12603, complete sequence) position: , mismatch: 10, identity: 0.688

ccacgttcggcgatgttggccccatcggtcca	CRISPR spacer
actcgttcggcgatgtggcccccatccaggtg	Protospacer
 * ************* * ******* .  ..

54. spacer 4.8|769558|32|NZ_CP046283|CRISPRCasFinder,CRT matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 10, identity: 0.688

aggggcgttccgcagtcgacaagggctgaaaa	CRISPR spacer
ccgggcggtccgcagtcgacgagggtgaggga	Protospacer
  ***** ************.****. ....*

55. spacer 4.8|769558|32|NZ_CP046283|CRISPRCasFinder,CRT matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 10, identity: 0.688

aggggcgttccgcagtcgacaagggctgaaaa	CRISPR spacer
ccgggcggtccgcagtcgacgagggtgaggga	Protospacer
  ***** ************.****. ....*

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

434596 : 475331

Salmonella_phage(51.06%)

lysis,holin,portal,plate,tail,tRNA,head,terminase,capsid,integrase

attL 437983:438000|attR 439684:439701

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000478472.1\|434596_436162_+	HAMP domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	1.0e-12	33.9
WP_000983441.1\|436158_436806_-	PadR family transcriptional regulator	NA	NA	NA	NA
WP_000213760.1\|437037_437805_+	siderophore-interacting protein	NA	NA	NA	NA
437983:438000	attL	NA	NA	NA	NA
WP_000290960.1\|438021_439044_-\|integrase	tyrosine-type recombinase/integrase	A0A218M4I3	Erwinia_phage	3.5e-176	87.9
WP_000345246.1\|439043_439616_-	phage repressor protein CI	A0A218M4J1	Erwinia_phage	1.1e-99	93.1
WP_000135596.1\|439747_440011_+	hypothetical protein	A0A218M4I5	Erwinia_phage	8.5e-42	90.8
439684:439701	attR	NA	NA	NA	NA
WP_000459332.1\|440041_440551_+	phage regulatory CII family protein	A0A0M4QWN1	Salmonella_phage	6.2e-89	98.8
WP_000920169.1\|440558_440759_+	DUF2724 domain-containing protein	Q6K1F7	Salmonella_virus	1.2e-32	100.0
WP_000963463.1\|440722_441061_+	DUF5347 domain-containing protein	A0A218M4I7	Erwinia_phage	7.3e-54	94.6
WP_000092339.1\|441125_441359_+	DUF2732 domain-containing protein	Q6K1F6	Salmonella_virus	4.3e-29	88.3
WP_000752599.1\|441358_441586_+	TraR/DksA family transcriptional regulator	A0A0M4S5Q7	Salmonella_phage	2.0e-31	91.7
WP_000849968.1\|441582_442167_+	3'-5' exonuclease	A0A1S6L012	Salmonella_phage	4.0e-68	67.7
WP_000058620.1\|442163_442436_+	hypothetical protein	A0A218M4I8	Erwinia_phage	2.1e-35	78.9
WP_001232572.1\|442432_442714_+	DUF3850 domain-containing protein	A0A0P0I3U9	Klebsiella_phage	2.0e-12	52.6
WP_001266445.1\|442704_444948_+	replication endonuclease	A0A218M4H2	Erwinia_phage	0.0e+00	95.3
WP_000373436.1\|445064_445505_+	DinI family protein	A0A218M4I0	Erwinia_phage	1.8e-65	92.0
WP_000381893.1\|445584_446316_+	hypothetical protein	Q37850	Escherichia_phage	1.8e-129	94.7
WP_024132455.1\|446495_446705_+	hypothetical protein	Q6K1F0	Salmonella_virus	8.2e-32	94.2
WP_001161212.1\|446778_447717_-	hypothetical protein	Q2P9W7	Enterobacteria_phage	9.8e-141	77.6
WP_000517963.1\|448149_449196_-\|portal	phage portal protein	S4TNX7	Salmonella_phage	4.8e-189	98.6
WP_000156060.1\|449195_450965_-\|terminase	terminase ATPase subunit family protein	S4TT96	Salmonella_phage	0.0e+00	99.0
WP_001085931.1\|451130_451985_+\|capsid	capsid scaffolding protein	S4TP53	Salmonella_phage	1.2e-156	98.6
WP_001247240.1\|452061_453129_+\|capsid	phage major capsid protein, P2 family	A0A0M4R4W2	Salmonella_phage	1.3e-197	99.2
WP_000203471.1\|453132_453882_+\|terminase	terminase endonuclease subunit	Q6K1I5	Salmonella_virus	6.4e-127	97.2
WP_000214256.1\|453975_454482_+\|head	head completion/stabilization protein	S4TNY1	Salmonella_phage	3.8e-91	99.4
WP_000868400.1\|454481_454685_+\|tail	tail protein X	A0A0M3ULF4	Salmonella_phage	3.6e-32	100.0
WP_000134659.1\|454688_454985_+\|holin	holin	S4TP56	Salmonella_phage	4.4e-47	100.0
WP_001144118.1\|454971_455469_+	glycoside hydrolase family 104 protein	S4TUB1	Salmonella_phage	5.8e-92	98.8
WP_000866104.1\|455465_455879_+\|lysis	LysB family phage lysis regulatory protein	S4TRW3	Salmonella_phage	2.9e-44	99.3
WP_077941258.1\|455850_456024_+\|lysis	phage lysis protein	S4TNY4	Salmonella_phage	3.1e-24	96.5
WP_001169074.1\|455986_456454_+\|tail	phage tail protein	S4TTA5	Salmonella_phage	1.1e-84	100.0
WP_001293104.1\|456446_456896_+	phage virion morphogenesis protein	A0A0M3UL83	Salmonella_phage	5.5e-73	98.7
WP_001094750.1\|456964_457606_+\|plate	phage baseplate assembly protein V	Q6K1H6	Salmonella_virus	4.8e-115	100.0
WP_000127147.1\|457602_457950_+\|plate	baseplate assembly protein	S4TRW8	Salmonella_phage	1.6e-56	99.1
WP_000246677.1\|457956_458865_+\|plate	baseplate assembly protein	S4TNY7	Salmonella_phage	2.6e-162	100.0
WP_001000068.1\|458857_459388_+\|tail	phage tail protein I	S4TTA8	Salmonella_phage	9.2e-104	100.0
WP_000104698.1\|459398_461492_+\|tail	tail protein	A0A1B0VFW4	Salmonella_phage	5.8e-218	94.5
WP_086935187.1\|461461_462082_+\|tail	tail fiber assembly protein	A0A1B0VCD0	Salmonella_phage	6.8e-98	86.7
WP_001279029.1\|462250_463438_+\|tail	phage tail sheath protein	Q6K1H0	Salmonella_virus	2.9e-222	99.5
WP_001207675.1\|463453_463972_+\|tail	phage major tail tube protein	S4TNZ0	Salmonella_phage	6.5e-94	100.0
WP_001029726.1\|464034_464370_+\|tail	phage tail assembly protein	S4TTB2	Salmonella_phage	1.4e-52	100.0
WP_085984508.1\|464366_464522_+\|tail	GpE family phage tail protein	Q6K1G8	Salmonella_virus	8.8e-23	98.0
WP_000069526.1\|464514_466956_+\|tail	phage tail tape measure protein	S4TP64	Salmonella_phage	0.0e+00	91.6
WP_000978859.1\|466970_467456_+\|tail	phage tail protein	Q6K1G5	Salmonella_virus	3.9e-85	99.4
WP_000627822.1\|467452_468622_+	phage late control D family protein	A0A0M5M5V5	Salmonella_phage	6.6e-211	97.7
WP_000468307.1\|468688_468907_+	DNA-binding transcriptional regulator	A0A2I8TV89	Erwinia_phage	9.5e-39	98.6
WP_000237776.1\|469266_469773_+	G/U mismatch-specific DNA glycosylase	NA	NA	NA	NA
WP_001519776.1\|469896_471744_-	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	8.4e-35	33.7
WP_000918865.1\|471893_473639_-	DNA primase	A0A0K1LMQ9	Caulobacter_phage	2.1e-72	38.4
WP_001144069.1\|473874_474090_-	30S ribosomal protein S21	NA	NA	NA	NA
WP_001264394.1\|474317_475331_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	2.8e-109	59.5

DBSCAN-SWA_2

930163 : 952795

Escherichia_phage(60.0%)

transposase,integrase

attL 932847:932906|attR 952800:953622

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001067855.1\|930163_930868_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_001387387.1\|930914_931316_-\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_000027057.1\|931465_932326_-	class A broad-spectrum beta-lactamase TEM-1	Q1MVP3	Enterobacteria_phage	4.6e-161	100.0
932847:932906	attL	NA	NA	NA	NA
WP_001067855.1\|932910_933615_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000240536.1\|934370_935222_+	replication protein	NA	NA	NA	NA
WP_001043265.1\|935529_936345_+	sulfonamide-resistant dihydropteroate synthase Sul2	NA	NA	NA	NA
WP_001082319.1\|936405_937209_+	aminoglycoside O-phosphotransferase APH(3'')-Ib	Q75ZG1	Hepacivirus	4.9e-24	34.3
WP_000480968.1\|937208_938045_+	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	NA	NA
WP_000845049.1\|938016_939135_-\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.5e-71	45.7
WP_000777555.1\|939291_939765_+	trimethoprim-resistant dihydrofolate reductase DfrA1	A0A140HLG8	Bacillus_phage	3.7e-19	33.8
WP_001206317.1\|939857_940649_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1	NA	NA	NA	NA
WP_000679427.1\|940812_941160_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
WP_000259031.1\|941153_941993_+	sulfonamide-resistant dihydropteroate synthase Sul1	NA	NA	NA	NA
WP_000376623.1\|942120_942621_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_001163403.1\|942796_943579_-	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	2.5e-33	35.0
WP_001324342.1\|943568_945092_-\|transposase	IS21-like element IS1326 family transposase	A0A2L1IVA1	Escherichia_phage	1.2e-15	24.2
WP_000059618.1\|945193_945922_-	hypothetical protein	NA	NA	NA	NA
WP_001611016.1\|946003_946282_+	diguanylate cyclase	NA	NA	NA	NA
WP_000928197.1\|946289_946541_-	hypothetical protein	NA	NA	NA	NA
WP_000412211.1\|948065_948725_+	type A-1 chloramphenicol O-acetyltransferase	G3CFL0	Escherichia_phage	8.4e-131	100.0
WP_000656305.1\|948925_949303_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_001067855.1\|952090_952795_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
952800:953622	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1030387 : 1107128

Salmonella_phage(36.84%)

lysis,holin,portal,transposase,tail,tRNA,head,terminase,capsid,integrase,protease

attL 1022468:1022484|attR 1112975:1112991

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1022468:1022484	attL	NA	NA	NA	NA
WP_000997368.1\|1030387_1031425_+\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA
WP_000179978.1\|1031540_1032230_-	uracil-DNA glycosylase	A0A172DS90	Canid_alphaherpesvirus	4.6e-55	49.5
WP_000627811.1\|1032548_1032932_+	autonomous glycyl radical cofactor GrcA	Q7Y524	Enterobacteria_phage	6.1e-33	74.0
WP_000188414.1\|1032993_1033581_-	cysteine/O-acetylserine transporter	NA	NA	NA	NA
WP_001526875.1\|1033683_1034583_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_000219174.1\|1034600_1035935_-	ATP-dependent RNA helicase SrmB	A0A1B1IS59	uncultured_Mediterranean_phage	1.6e-43	29.7
WP_000083343.1\|1036065_1036803_+\|tRNA	tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN	NA	NA	NA	NA
WP_000989177.1\|1036787_1038410_-	L-aspartate oxidase	NA	NA	NA	NA
WP_014344135.1\|1038673_1038838_+	rpoE leader peptide RseD	NA	NA	NA	NA
WP_000003307.1\|1038834_1039410_+	RNA polymerase sigma factor RpoE	NA	NA	NA	NA
WP_001168374.1\|1039441_1040092_+	anti-sigma-E factor RseA	NA	NA	NA	NA
WP_000812017.1\|1040091_1041048_+	sigma-E factor regulatory protein RseB	NA	NA	NA	NA
WP_000589087.1\|1041044_1041524_+	SoxR-reducing system protein RseC	NA	NA	NA	NA
WP_001007939.1\|1042021_1043251_+\|integrase	site-specific integrase	H6WRW7	Salmonella_phage	2.9e-233	94.4
WP_001670787.1\|1043228_1043513_-	excisionase Xis	H6WRW8	Salmonella_phage	3.1e-42	86.2
WP_001237031.1\|1043553_1043793_-	DUF4060 family protein	S4TR31	Salmonella_phage	2.0e-37	100.0
WP_077248255.1\|1043835_1044993_-	recombinase RecT	S4TTE8	Salmonella_phage	3.9e-216	99.5
WP_000017123.1\|1044955_1047883_-	exodeoxyribonuclease	S4TNL0	Salmonella_phage	0.0e+00	99.3
WP_001539619.1\|1048009_1048360_-	hypothetical protein	S4TSN6	Salmonella_phage	1.1e-60	97.4
WP_000917562.1\|1048381_1048540_-	hypothetical protein	H6WRX3	Salmonella_phage	9.0e-23	98.1
WP_000950426.1\|1048996_1049659_-	hypothetical protein	NA	NA	NA	NA
WP_000356948.1\|1049658_1050045_-	hypothetical protein	NA	NA	NA	NA
WP_001111772.1\|1050037_1050877_-	AAA family ATPase	A0A1X9IGI7	Lactococcus_phage	1.5e-31	33.3
WP_000660736.1\|1050935_1051331_-	helix-turn-helix domain-containing protein	K7PM35	Enterobacteria_phage	1.9e-37	61.4
WP_000643689.1\|1051430_1051673_+	Rha family transcriptional regulator	A0A0M4QX15	Salmonella_phage	2.1e-23	64.1
WP_010835408.1\|1051632_1052007_+	hypothetical protein	S4TTD7	Salmonella_phage	1.9e-63	98.4
WP_000024044.1\|1052098_1052983_+	replication protein	K7PGT1	Enterobacteria_phage	1.3e-46	47.2
WP_000801766.1\|1052979_1053675_+	hypothetical protein	G8C7U6	Escherichia_phage	2.1e-55	45.4
WP_000664368.1\|1053688_1054387_+	DUF550 domain-containing protein	A0A0M4RTV1	Salmonella_phage	2.1e-63	85.7
WP_000877757.1\|1054494_1055127_+	hypothetical protein	NA	NA	NA	NA
WP_001217669.1\|1055369_1055603_+	DinI family protein	H6WRY5	Salmonella_phage	5.6e-37	100.0
WP_014343878.1\|1055719_1055968_+	hypothetical protein	A0A0U2C0C8	Salmonella_phage	1.6e-42	100.0
WP_000929794.1\|1056002_1056605_+	DUF1367 family protein	S4TTI0	Salmonella_phage	1.4e-108	98.5
WP_001096550.1\|1056813_1057425_+	recombination protein NinG	A0A0M4RU10	Salmonella_phage	1.2e-91	99.0
WP_000801757.1\|1057421_1057562_+	YlcG family protein	A0A0M5M7B2	Salmonella_phage	7.2e-08	78.9
WP_001097241.1\|1057558_1058236_+	antitermination protein	I6PDF8	Cronobacter_phage	7.7e-63	54.0
WP_000211410.1\|1058508_1059072_+	ORF6N domain-containing protein	A0A0P0ZC44	Stx2-converting_phage	7.6e-56	92.2
WP_000657897.1\|1059578_1059767_+	hypothetical protein	NA	NA	NA	NA
WP_001110783.1\|1059981_1060668_-\|protease	type III secretion system effector protease GogA	Q9MBM2	Phage_Gifsy-1	9.4e-133	100.0
WP_001574216.1\|1060943_1061273_+\|holin	phage holin, lambda family	A0A0M3ULK9	Salmonella_phage	5.8e-56	100.0
WP_000984581.1\|1061256_1061709_+	lysozyme	A0A0M4R365	Salmonella_phage	5.1e-79	97.3
WP_001533543.1\|1061726_1062179_+\|lysis	lysis protein	A0A0M4RD57	Salmonella_phage	2.9e-66	92.7
WP_000669690.1\|1062414_1062816_-	hypothetical protein	NA	NA	NA	NA
WP_001102153.1\|1063102_1063648_+\|terminase	terminase small subunit	A0A0U2S671	Escherichia_phage	1.5e-56	80.6
WP_000623091.1\|1063619_1065551_+\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	6.3e-259	65.7
WP_000201415.1\|1065534_1065738_+\|head,tail	head-tail joining protein	K7PM10	Enterobacteria_phage	1.9e-17	73.8
WP_000831821.1\|1065734_1067315_+\|portal	phage portal protein	K7P6U7	Enterobacteria_phage	9.6e-189	62.8
WP_001189503.1\|1067304_1068801_+	S49 family peptidase	A0A0K2FI53	Enterobacteria_phage	8.1e-97	52.2
WP_000011260.1\|1068813_1069161_+\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	9.2e-20	52.7
WP_000522566.1\|1069215_1070244_+\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	1.7e-114	61.1
WP_000201486.1\|1070301_1070661_+	DNA packaging protein	NA	NA	NA	NA
WP_000083294.1\|1070671_1071055_+\|tail	tail attachment protein	A0A0K2FJB7	Enterobacteria_phage	9.2e-29	55.6
WP_000677089.1\|1071082_1071661_+\|tail	phage tail protein	A5LH33	Enterobacteria_phage	3.7e-82	80.2
WP_000817263.1\|1071709_1072840_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	Q9G0F2	Phage_Gifsy-1	9.2e-218	100.0
WP_000033885.1\|1072948_1073350_+\|tail	tail protein	Q9G0F3	Phage_Gifsy-1	8.1e-52	100.0
WP_000971954.1\|1073357_1074104_+\|tail	tail protein	A0A291AWU6	Escherichia_phage	1.9e-99	76.9
WP_000479607.1\|1074154_1074550_+\|tail	phage minor tail protein G	A5LH36	Enterobacteria_phage	2.3e-30	56.5
WP_010989052.1\|1074546_1074885_+\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	1.3e-31	62.4
WP_000372065.1\|1074856_1077952_+\|tail	phage tail tape measure protein	A0A291AWX1	Escherichia_phage	1.7e-274	62.3
WP_000447369.1\|1077954_1078284_+\|tail	phage tail protein	A5LH39	Enterobacteria_phage	1.3e-42	70.4
WP_001152689.1\|1078293_1078992_+\|tail	phage minor tail protein L	A0A1B5FP81	Escherichia_phage	5.5e-104	76.3
WP_000662739.1\|1078998_1079736_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	5.2e-129	85.0
WP_000246126.1\|1079633_1080281_+\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	2.1e-89	77.7
WP_000514920.1\|1080342_1083705_+	host specificity protein J	K7PKJ2	Enterobacteria_phage	0.0e+00	79.6
WP_000178849.1\|1083743_1083986_+	hypothetical protein	NA	NA	NA	NA
WP_001144680.1\|1084039_1086412_+\|tail	tail protein	A0A0K2FIZ6	Escherichia_phage	4.8e-91	65.6
WP_000593433.1\|1086408_1087233_+\|tail	tail protein	A0A0M4QWS3	Salmonella_phage	1.2e-145	92.0
WP_000143154.1\|1087222_1087801_+\|tail	tail fiber assembly protein	A0A0M4RTP2	Salmonella_phage	3.6e-93	88.9
WP_010989049.1\|1087897_1088125_-	PagK-like protein	NA	NA	NA	NA
WP_001738443.1\|1088231_1088444_+	helix-turn-helix domain-containing protein	S4TTF2	Salmonella_phage	3.8e-08	90.6
WP_015701342.1\|1088506_1088572_+	DUF4113 domain-containing protein	NA	NA	NA	NA
WP_015589559.1\|1089151_1089316_+\|transposase	transposase	NA	NA	NA	NA
WP_001542312.1\|1090028_1090166_-	hypothetical protein	NA	NA	NA	NA
WP_010989047.1\|1090650_1092144_-	type III secretion effector GogB	Q9MBM1	Phage_Gifsy-1	3.4e-260	100.0
WP_000790154.1\|1092548_1094348_+	elongation factor 4	E4ZFJ7	Streptococcus_phage	7.2e-23	24.9
WP_000002559.1\|1094364_1095339_+	signal peptidase I	NA	NA	NA	NA
WP_001068341.1\|1095612_1096293_+	ribonuclease III	A0A2K9L5P0	Tupanvirus	7.4e-21	31.8
WP_000102232.1\|1096289_1097195_+	GTPase Era	NA	NA	NA	NA
WP_000399380.1\|1097206_1097935_+	DNA repair protein RecO	NA	NA	NA	NA
WP_000818972.1\|1097946_1098678_+	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA
WP_000986043.1\|1098677_1099058_+	holo-ACP synthase	NA	NA	NA	NA
WP_001196290.1\|1099169_1099430_-	YfhL family 4Fe-4S dicluster ferredoxin	A0A1B1IWY9	uncultured_Mediterranean_phage	1.4e-17	52.3
WP_001022463.1\|1099467_1100394_-	LysR family transcriptional regulator	A0A2P0ZL89	Lactobacillus_phage	3.0e-09	24.4
WP_001276370.1\|1100509_1101706_+	OFA family MFS transporter	NA	NA	NA	NA
WP_000684022.1\|1101727_1102645_+	oxidoreductase	NA	NA	NA	NA
WP_000995703.1\|1102683_1103532_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_001048530.1\|1103647_1104541_+	N-acetylmuramic acid 6-phosphate etherase	NA	NA	NA	NA
WP_000361664.1\|1104551_1105913_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA
WP_000253558.1\|1105916_1106552_+	phosphatidylglycerophosphatase C	NA	NA	NA	NA
WP_001134566.1\|1106576_1107128_+\|tRNA	tRNA adenosine(34) deaminase TadA	NA	NA	NA	NA
1112975:1112991	attR	NA	NA	NA	NA

DBSCAN-SWA_4

1461280 : 1490883

Salmonella_phage(41.67%)

tail,holin,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000781589.1\|1461280_1461775_-\|protease	serine protease inhibitor ecotin	NA	NA	NA	NA
WP_000228070.1\|1462188_1462680_+	ferredoxin-type protein NapF	NA	NA	NA	NA
WP_001260058.1\|1462669_1462933_+	chaperone NapD	NA	NA	NA	NA
WP_000778097.1\|1462929_1465416_+	nitrate reductase catalytic subunit NapA	NA	NA	NA	NA
WP_000091673.1\|1465422_1466118_+	ferredoxin-type protein NapG	NA	NA	NA	NA
WP_000013530.1\|1466104_1466974_+	quinol dehydrogenase ferredoxin subunit NapH	NA	NA	NA	NA
WP_000835182.1\|1467089_1467539_+	nitrate reductase cytochrome c-type subunit	NA	NA	NA	NA
WP_000431778.1\|1467548_1468151_+	cytochrome c-type protein NapC	NA	NA	NA	NA
WP_000888541.1\|1468171_1468789_+	cytochrome c biogenesis heme-transporting ATPase CcmA	A0A2H4PQG7	Staphylococcus_phage	2.2e-11	27.2
WP_000990028.1\|1468785_1469445_+	heme exporter protein CcmB	NA	NA	NA	NA
WP_000266008.1\|1469496_1470234_+	heme ABC transporter permease	NA	NA	NA	NA
WP_000074110.1\|1470230_1470443_+	heme exporter protein CcmD	NA	NA	NA	NA
WP_001053618.1\|1470439_1470919_+	cytochrome c maturation protein CcmE	NA	NA	NA	NA
WP_000982518.1\|1470915_1472847_+	heme lyase CcmF/NrfE family subunit	NA	NA	NA	NA
WP_000828296.1\|1472843_1473401_+	thiol:disulfide interchange protein DsbE	NA	NA	NA	NA
WP_001238333.1\|1473397_1474441_+	cytochrome c-type biogenesis protein CcmH	NA	NA	NA	NA
WP_001115498.1\|1474484_1475132_-	nitrate/nitrite response regulator protein NarP	NA	NA	NA	NA
WP_000281877.1\|1475861_1476425_+	acyloxyacyl hydrolase	NA	NA	NA	NA
WP_001653202.1\|1476616_1476820_-	virulence protein MsgA	NA	NA	NA	NA
WP_000624225.1\|1477122_1477914_+\|tail	tail protein	Q1MVL8	Enterobacteria_phage	1.7e-48	31.6
WP_001113462.1\|1478210_1478414_+\|tail	tail protein	NA	NA	NA	NA
WP_014343868.1\|1478582_1480949_+	SPI-2 type III secretion system effector E3 ubiquitin transferase SspH2	Q9MBL9	Phage_Gifsy-2	3.2e-71	88.0
WP_001202279.1\|1481277_1482267_+	DUF968 domain-containing protein	A0A1C9IHZ5	Salmonella_phage	6.0e-189	97.3
WP_010989045.1\|1482281_1482650_+	antitermination protein Q	A5LH77	Enterobacteria_phage	7.4e-52	81.7
WP_001120499.1\|1484307_1484637_+\|holin	phage holin, lambda family	Q8SBE1	Shigella_phage	3.9e-36	94.6
WP_000554739.1\|1485229_1486471_+	hypothetical protein	Q8HAB4	Salmonella_phage	1.0e-52	95.3
WP_001215679.1\|1486473_1487001_+\|tail	tail fiber assembly protein	A0A1S6KZZ1	Salmonella_phage	3.1e-11	31.3
WP_000022213.1\|1487378_1487822_+\|tail	tail fiber assembly protein	A0A0F7LDZ0	Escherichia_phage	1.4e-28	43.9
WP_000639473.1\|1487875_1489705_-	acyltransferase	C6ZR20	Salmonella_phage	3.0e-61	29.6
WP_000884778.1\|1490061_1490352_-	DinI family protein	S4TND2	Salmonella_phage	4.7e-25	83.3
WP_000806401.1\|1490379_1490883_+	LexA family transcriptional regulator	Q1MVE7	Enterobacteria_phage	9.5e-50	71.3

DBSCAN-SWA_5

1562934 : 1572105

Enterobacteria_phage(66.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000569166.1\|1562934_1563882_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.7e-23	31.2
WP_000824855.1\|1563865_1564597_+	ABC transporter permease	NA	NA	NA	NA
WP_001261696.1\|1564577_1564685_-	protein YohO	NA	NA	NA	NA
WP_001240418.1\|1564744_1565476_-	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	4.5e-101	87.9
WP_000272845.1\|1565698_1567384_+	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	6.2e-279	91.1
WP_000598637.1\|1567380_1568100_+	two-component system response regulator BtsR	NA	NA	NA	NA
WP_000950413.1\|1568146_1568614_+	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	3.9e-74	90.3
WP_001197952.1\|1568670_1569201_-	YehR family lipoprotein	NA	NA	NA	NA
WP_000703138.1\|1569372_1569831_-	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	3.2e-52	71.9
WP_000195332.1\|1570071_1572105_-\|tRNA	methionine--tRNA ligase	A0A1V0SDF2	Indivirus	1.0e-54	27.6

DBSCAN-SWA_6

1640413 : 1650919

Enterobacteria_phage(37.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001111841.1\|1640413_1641817_+	colanic acid biosynthesis protein WcaM	A0A291LBB9	Klebsiella_phage	3.1e-21	27.1
WP_000981469.1\|1641994_1642888_+	GalU regulator GalF	A0A127AW70	Bacillus_phage	4.8e-44	42.2
WP_000697840.1\|1643264_1644350_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	1.2e-102	53.9
WP_001023662.1\|1644349_1645249_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	1.4e-30	36.3
WP_000857529.1\|1645296_1646175_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	9.3e-109	65.5
WP_000973708.1\|1646175_1646727_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	2.2e-52	58.0
WP_000018226.1\|1646732_1647725_+	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA
WP_000648784.1\|1647721_1648495_+	glucose-1-phosphate cytidylyltransferase	NA	NA	NA	NA
WP_000565905.1\|1648499_1649579_+	CDP-glucose 4,6-dehydratase	A0A222YY99	Synechococcus_phage	6.6e-16	24.1
WP_000126349.1\|1649605_1650919_+	lipopolysaccharide biosynthesis protein RfbH	H8ZJ36	Ostreococcus_tauri_virus	7.0e-52	35.1

DBSCAN-SWA_7

1736913 : 1787673

Salmonella_phage(89.06%)

lysis,holin,portal,plate,tail,head,terminase,capsid,integrase,protease

attL 1731491:1731505|attR 1747967:1747981

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1731491:1731505	attL	NA	NA	NA	NA
WP_001219015.1\|1736913_1737387_-	peptidase	A0A0F6TJ61	Escherichia_coli_O157_typing_phage	7.1e-39	77.6
WP_001738920.1\|1738034_1738325_-	DUF4102 domain-containing protein	H2BDA3	Pseudomonas_phage	3.0e-08	49.1
WP_000598920.1\|1738696_1739494_-	DgsA anti-repressor MtfA	NA	NA	NA	NA
WP_000532847.1\|1739785_1740775_-\|integrase	tyrosine-type recombinase/integrase	A0A192Y7M7	Salmonella_phage	8.6e-196	100.0
WP_000414876.1\|1740776_1741019_-	DUF4224 domain-containing protein	Q8HAA9	Salmonella_phage	9.5e-40	100.0
WP_001061334.1\|1741043_1741613_-	3'-5' exoribonuclease	A0A192Y6E0	Salmonella_phage	7.1e-110	100.0
WP_000208068.1\|1741616_1742450_-	hypothetical protein	Q8HAA7	Salmonella_phage	4.7e-163	100.0
WP_000065095.1\|1742446_1743064_-	ead/Ea22-like family protein	Q8HAA6	Salmonella_phage	2.6e-113	100.0
WP_000071070.1\|1743060_1743576_-	DUF262 domain-containing protein	Q8HAA5	Salmonella_phage	7.4e-98	100.0
WP_000764235.1\|1743572_1743803_-	hypothetical protein	Q8HAA4	Salmonella_phage	2.0e-34	100.0
WP_000008351.1\|1743873_1744413_-	hypothetical protein	A0A192Y8M4	Salmonella_phage	2.6e-98	100.0
WP_000080415.1\|1744549_1745377_-	YfdQ family protein	Q8HAA2	Salmonella_phage	7.5e-153	100.0
WP_000997190.1\|1745434_1745806_-	hypothetical protein	Q8HAA1	Salmonella_phage	1.1e-63	100.0
WP_001020636.1\|1746620_1747316_-	helix-turn-helix transcriptional regulator	Q8HAA0	Salmonella_phage	3.2e-128	100.0
WP_001191666.1\|1747413_1747638_+	helix-turn-helix transcriptional regulator	A0A1C9IHV8	Salmonella_phage	1.9e-34	100.0
WP_000509731.1\|1747666_1748221_+	hypothetical protein	A0A1C9II13	Salmonella_phage	6.9e-102	100.0
1747967:1747981	attR	NA	NA	NA	NA
WP_001087402.1\|1748217_1749375_+	peptidase	Q8HA97	Salmonella_phage	4.2e-218	100.0
WP_000620702.1\|1749371_1749596_+	hypothetical protein	A0A1C9II64	Salmonella_phage	3.3e-39	100.0
WP_000061500.1\|1749592_1750411_+	helix-turn-helix domain-containing protein	Q8HA96	Salmonella_phage	2.8e-136	100.0
WP_001684745.1\|1750412_1750895_+	PerC family transcriptional regulator	Q8HA95	Salmonella_phage	1.1e-87	100.0
WP_000066908.1\|1750894_1751788_+	phage N-6-adenine-methyltransferase	Q8HA94	Salmonella_phage	7.6e-175	100.0
WP_001241579.1\|1751784_1752174_+	RusA family crossover junction endodeoxyribonuclease	Q8HA93	Salmonella_phage	3.7e-70	100.0
WP_001061457.1\|1752190_1753051_+	KilA-N domain-containing protein	Q8HA92	Salmonella_phage	2.9e-163	100.0
WP_001202277.1\|1753058_1754048_+	DUF968 domain-containing protein	A0A1C9IHZ5	Salmonella_phage	4.9e-191	97.6
WP_000188927.1\|1754058_1754682_+	hypothetical protein	Q8HA89	Salmonella_phage	9.1e-119	100.0
WP_001527054.1\|1754814_1755072_+	hypothetical protein	Q8HA88	Salmonella_phage	5.2e-44	100.0
WP_014343859.1\|1755001_1755436_-	hypothetical protein	NA	NA	NA	NA
WP_001527046.1\|1755597_1755942_+\|holin	phage holin, lambda family	Q8HA87	Salmonella_phage	5.3e-44	100.0
WP_001005901.1\|1755944_1756559_+	glycoside hydrolase family 19 protein	Q8HA86	Salmonella_phage	9.3e-116	100.0
WP_001050825.1\|1756555_1757041_+\|lysis	lysis protein	Q8HA85	Salmonella_phage	5.9e-81	100.0
WP_000877027.1\|1757253_1757673_+	KilA-N domain-containing protein	Q8HA84	Salmonella_phage	4.8e-71	100.0
WP_001292890.1\|1757892_1758195_+	hypothetical protein	Q8HA83	Salmonella_phage	3.6e-52	100.0
WP_001135225.1\|1758255_1758606_+	HNH endonuclease	Q8HA82	Salmonella_phage	2.5e-65	100.0
WP_000929191.1\|1758731_1759226_+\|terminase	phage terminase small subunit P27 family	Q8HAD7	Salmonella_phage	4.6e-89	100.0
WP_000088182.1\|1759222_1760956_+\|terminase	terminase large subunit	Q8HAD6	Salmonella_phage	0.0e+00	100.0
WP_000605609.1\|1760967_1761150_+	hypothetical protein	Q8HAD5	Salmonella_phage	1.0e-25	100.0
WP_000466254.1\|1761149_1762391_+\|portal	phage portal protein	Q8HAD4	Salmonella_phage	2.0e-242	99.8
WP_001193639.1\|1762368_1763019_+\|head,protease	HK97 family phage prohead protease	Q8HAD3	Salmonella_phage	1.5e-119	100.0
WP_000257528.1\|1763033_1764239_+\|capsid	phage major capsid protein	Q8HAD2	Salmonella_phage	1.6e-223	100.0
WP_000601353.1\|1764289_1764490_+	hypothetical protein	Q8HAD1	Salmonella_phage	1.4e-28	100.0
WP_000927378.1\|1764492_1764816_+\|head,tail	phage gp6-like head-tail connector protein	A0A192Y8J4	Salmonella_phage	6.3e-55	100.0
WP_000702408.1\|1764812_1765217_+\|head	phage head closure protein	Q8HAC9	Salmonella_phage	1.4e-72	100.0
WP_001135697.1\|1765188_1765701_+	hypothetical protein	Q8HAC8	Salmonella_phage	4.6e-92	100.0
WP_000779218.1\|1765697_1766258_+	hypothetical protein	Q8HAC7	Salmonella_phage	3.0e-105	100.0
WP_000497739.1\|1766261_1766426_+	DUF2635 domain-containing protein	Q8HAC6	Salmonella_phage	1.0e-24	100.0
WP_001007991.1\|1766415_1767912_+\|tail	tail sheath protein	Q8HAC5	Salmonella_phage	2.7e-278	100.0
WP_000515952.1\|1767911_1768268_+\|tail	tail protein	A0A192Y8K0	Salmonella_phage	2.6e-62	100.0
WP_000588852.1\|1768264_1768591_+\|tail	phage tail assembly protein	Q8HAC3	Salmonella_phage	2.3e-52	99.1
WP_000785385.1\|1768675_1770604_+\|tail	phage tail tape measure protein	Q8HAC2	Salmonella_phage	0.0e+00	99.8
WP_000863818.1\|1770637_1771978_+	DNA circularization protein	A0A192Y5U9	Salmonella_phage	5.7e-251	99.6
WP_001066636.1\|1771974_1773033_+	hypothetical protein	Q8HAC0	Salmonella_phage	1.3e-202	100.0
WP_001273649.1\|1773032_1773566_+\|plate	phage baseplate assembly protein	Q8HAB9	Salmonella_phage	1.4e-96	100.0
WP_000605050.1\|1773570_1773984_+	hypothetical protein	Q8HAB8	Salmonella_phage	1.1e-75	100.0
WP_014343856.1\|1773955_1774501_+	phage protein	Q8HAB7	Salmonella_phage	9.2e-99	100.0
WP_014343855.1\|1774535_1775057_+\|plate	baseplate J/gp47 family protein	Q8HAB6	Salmonella_phage	2.9e-94	100.0
WP_001207832.1\|1775059_1775647_+	DUF2313 domain-containing protein	A0A192Y5V3	Salmonella_phage	2.9e-114	100.0
WP_000554737.1\|1775633_1777196_+	hypothetical protein	Q8HAB4	Salmonella_phage	2.6e-287	100.0
WP_000760554.1\|1777195_1777765_+\|tail	tail fiber assembly protein	Q8HAB3	Salmonella_phage	7.3e-107	100.0
WP_000492926.1\|1778049_1779057_-	type III secretion system effector arginine glycosyltransferase	Q8HAB2	Salmonella_phage	7.9e-197	100.0
WP_001526483.1\|1779269_1779491_+	helix-turn-helix domain-containing protein	Q8HAB1	Salmonella_phage	1.2e-36	100.0
WP_000500831.1\|1780121_1780283_+	hypothetical protein	NA	NA	NA	NA
WP_000394196.1\|1780409_1780829_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	8.5e-36	60.5
WP_000457662.1\|1780831_1782100_+	translesion error-prone DNA polymerase V subunit UmuC	I6RSM4	Salmonella_phage	4.2e-227	92.2
WP_000208509.1\|1782554_1782767_+	cold-shock protein	A0A1W6JNX5	Morganella_phage	3.9e-21	70.0
WP_024131109.1\|1782777_1782966_+	hypothetical protein	NA	NA	NA	NA
WP_001080679.1\|1783226_1784432_-	porin OmpS1	Q1MVN1	Enterobacteria_phage	2.8e-108	54.9
WP_000107430.1\|1785082_1785382_+	membrane protein	NA	NA	NA	NA
WP_000377041.1\|1785473_1786169_+	phosphohydrolase	A0A1D6Y7U0	Golden_Marseillevirus	2.8e-07	27.1
WP_001157322.1\|1786242_1787673_+	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	1.0e-104	57.4

DBSCAN-SWA_8

2671810 : 2757312

Salmonella_phage(41.82%)

lysis,holin,portal,transposase,tRNA,tail,terminase,integrase,protease

attL 2695904:2695923|attR 2768458:2768477

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000938191.1\|2671810_2672491_+\|protease	type III secretion system effector protease PipA	Q9MBM0	Phage_Gifsy-2	8.3e-81	70.6
WP_000374050.1\|2673111_2673771_+\|protease	FtsH protease modulator YccA	A0A2H4JFM9	uncultured_Caudovirales_phage	2.3e-43	51.9
WP_000904446.1\|2673857_2674187_+	sulfurtransferase TusE	NA	NA	NA	NA
WP_000072884.1\|2674183_2674465_-	acylphosphatase	NA	NA	NA	NA
WP_000548082.1\|2674513_2675293_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000859419.1\|2675318_2675867_-	YbhB/YbcL family Raf kinase inhibitor-like protein	NA	NA	NA	NA
WP_000140480.1\|2676081_2677293_+	23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI	NA	NA	NA	NA
WP_000561983.1\|2677350_2677668_+	heat shock protein HspQ	NA	NA	NA	NA
WP_000975203.1\|2677712_2678129_-	CoA-binding protein	NA	NA	NA	NA
WP_000847719.1\|2678299_2678962_+	DUF2057 family protein	NA	NA	NA	NA
WP_000424187.1\|2679056_2679515_+	methylglyoxal synthase	NA	NA	NA	NA
WP_000420505.1\|2679550_2681605_-	DNA helicase IV	A7KV33	Bacillus_phage	8.5e-20	27.6
WP_001261222.1\|2681728_2682175_+	YccF domain-containing protein	NA	NA	NA	NA
WP_000950880.1\|2682193_2684347_+	TIGR01666 family membrane protein	NA	NA	NA	NA
WP_001202375.1\|2684333_2684939_-	TfoX/Sxy family DNA transformation protein	NA	NA	NA	NA
WP_000288732.1\|2685155_2685665_+	cell division inhibitor SulA	NA	NA	NA	NA
WP_001674965.1\|2686021_2687074_+	porin OmpA	NA	NA	NA	NA
WP_000877172.1\|2687145_2687598_-	macrodomain Ter protein MatP	NA	NA	NA	NA
WP_000156453.1\|2687783_2689544_+\|protease	Lon protease family protein	NA	NA	NA	NA
WP_000227928.1\|2689612_2690131_+	bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase	NA	NA	NA	NA
WP_001537784.1\|2690230_2690398_-	ribosome modulation factor	NA	NA	NA	NA
WP_000759136.1\|2690653_2691217_-	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA
WP_000433414.1\|2691213_2692854_-	intermembrane transport protein PqiB	NA	NA	NA	NA
WP_000333152.1\|2692858_2694112_-	membrane integrity-associated transporter subunit PqiA	NA	NA	NA	NA
WP_000053044.1\|2694126_2696034_-	ABC transporter ATP-binding protein	A0A2K9L3Z8	Tupanvirus	2.4e-53	29.8
2695904:2695923	attL	NA	NA	NA	NA
WP_001086486.1\|2696046_2698155_-	bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL	NA	NA	NA	NA
WP_000224069.1\|2698253_2699363_+	MOSC domain-containing protein	NA	NA	NA	NA
WP_001220671.1\|2699359_2699902_-	cell division protein ZapC	NA	NA	NA	NA
WP_000291723.1\|2700067_2701078_-	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA
WP_000193784.1\|2701285_2703898_-	aminopeptidase N	A0A0P0IY26	Acinetobacter_phage	6.3e-20	22.6
WP_000497441.1\|2704324_2704516_+	DinI-like family protein	S4TNM0	Salmonella_phage	6.2e-26	95.2
WP_001525490.1\|2704786_2705473_+	hypothetical protein	NA	NA	NA	NA
WP_010989011.1\|2705457_2705757_+	hypothetical protein	NA	NA	NA	NA
WP_000334547.1\|2705825_2706452_+	SOS response-associated peptidase	A0A2H4J5W2	uncultured_Caudovirales_phage	1.4e-66	63.2
WP_103100870.1\|2707099_2707279_-	hypothetical protein	Q9MBL9	Phage_Gifsy-2	9.6e-13	100.0
WP_001067855.1\|2707269_2707974_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_156004609.1\|2707864_2708896_-	SPI-2 type III secretion system effector SseI	Q9MBL9	Phage_Gifsy-2	1.5e-174	99.7
WP_000143167.1\|2709371_2709953_-\|tail	tail fiber assembly protein	A0A0M4RTP2	Salmonella_phage	1.7e-95	89.5
WP_001144679.1\|2709952_2712391_-\|tail	tail protein	A0A0K2FIZ6	Escherichia_phage	2.9e-91	63.4
WP_000178849.1\|2712444_2712687_-	hypothetical protein	NA	NA	NA	NA
WP_000033416.1\|2712725_2716076_-	host specificity protein J	A0A0K2FI38	Escherichia_phage	0.0e+00	68.5
WP_000246065.1\|2716147_2716852_-\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	9.2e-67	62.6
WP_000606351.1\|2716749_2717487_-\|tail	phage tail protein	A0A0P0ZE89	Stx2-converting_phage	1.6e-114	76.1
WP_001152415.1\|2717496_2718192_-\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	1.3e-89	66.7
WP_000877926.1\|2718281_2718815_+	superoxide dismutase [Cu-Zn]	Q9MC02	Salmonella_phage	1.8e-46	54.0
WP_000725267.1\|2718931_2719429_-	outer membrane beta-barrel protein	A0A1B0VBR9	Salmonella_phage	1.4e-16	36.6
WP_000978296.1\|2719527_2719860_-\|tail	phage tail protein	A5LH39	Enterobacteria_phage	3.3e-35	61.5
WP_010989010.1\|2719856_2722844_-\|tail	phage tail tape measure protein	A0A291AWX1	Escherichia_phage	8.2e-266	62.1
WP_010989009.1\|2722923_2723253_-\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	5.0e-23	50.9
WP_000478860.1\|2723249_2723648_-\|tail	phage minor tail protein G	A5LH36	Enterobacteria_phage	6.6e-30	56.1
WP_000132756.1\|2723693_2724443_-\|tail	tail protein	A0A291AWU6	Escherichia_phage	3.7e-90	68.6
WP_000196701.1\|2724454_2724856_-\|tail	tail protein	K7PHM6	Enterobacterial_phage	2.6e-42	60.2
WP_000453194.1\|2724852_2725419_-\|tail	phage tail protein	Q9G063	Phage_Gifsy-2	9.5e-14	97.8
WP_000774239.1\|2725399_2725699_-	ATP-binding protein	K7PH43	Enterobacteria_phage	4.5e-15	45.1
WP_001107908.1\|2725691_2726015_-	DUF2190 family protein	K7PLV6	Enterobacteria_phage	7.7e-29	61.3
WP_010989008.1\|2726105_2728187_-\|protease	Clp protease ClpP	A0A291AWT6	Escherichia_phage	4.8e-265	69.5
WP_077679777.1\|2728110_2729628_-\|portal	phage portal protein	A0A291AWU2	Escherichia_phage	1.5e-175	65.1
WP_000196190.1\|2729654_2729861_-	hypothetical protein	A0A1W6JT66	Pseudomonas_phage	2.9e-05	53.3
WP_000989241.1\|2729857_2731996_-\|terminase	phage terminase large subunit family protein	A5LH27	Enterobacteria_phage	3.4e-290	72.6
WP_000371785.1\|2731952_2732486_-	DUF1441 family protein	A0A291AWV8	Escherichia_phage	1.3e-33	48.1
WP_001541990.1\|2732693_2733173_-\|lysis	lysis protein	Q56118	Enterobacteria_phage	1.4e-55	77.0
WP_014343824.1\|2733190_2733643_-	lysozyme	A0A0M4R365	Salmonella_phage	5.1e-79	96.6
WP_001574216.1\|2733626_2733956_-\|holin	phage holin, lambda family	A0A0M3ULK9	Salmonella_phage	5.8e-56	100.0
WP_001141973.1\|2734231_2734918_+\|protease	type III secretion system effector protease GtgA	Q9MBM0	Phage_Gifsy-2	2.1e-132	100.0
WP_000798705.1\|2735278_2735728_+	hypothetical protein	NA	NA	NA	NA
WP_001534733.1\|2735863_2735989_-	hypothetical protein	NA	NA	NA	NA
WP_001047631.1\|2736545_2737343_-	antitermination protein	A0A0M4S661	Salmonella_phage	2.3e-151	99.6
WP_001617856.1\|2737332_2737479_-	YlcG family protein	A0A0M5M7B2	Salmonella_phage	4.3e-19	97.9
WP_001096552.1\|2737475_2738087_-	hypothetical protein	A0A0M4RU10	Salmonella_phage	6.9e-79	91.6
WP_000929805.1\|2738295_2738898_-	DUF1367 family protein	S4TTI0	Salmonella_phage	8.3e-109	98.5
WP_000807548.1\|2738980_2739202_-	hypothetical protein	NA	NA	NA	NA
WP_001217665.1\|2739313_2739547_-	DinI family protein	H6WRY5	Salmonella_phage	2.1e-36	98.7
WP_014343823.1\|2739838_2740129_-	hypothetical protein	NA	NA	NA	NA
WP_000065108.1\|2740206_2740518_-	ead/Ea22-like family protein	A0A220NQV2	Salmonella_phage	7.2e-32	97.2
WP_000113629.1\|2740514_2740862_-	DUF977 family protein	H6WRX9	Salmonella_phage	5.4e-52	89.6
WP_000800010.1\|2740872_2741622_-	DNA replication protein DnaC	S4TNF5	Salmonella_phage	3.6e-138	99.6
WP_001574095.1\|2742631_2743006_-	hypothetical protein	S4TTD7	Salmonella_phage	3.9e-64	99.2
WP_000370145.1\|2742971_2743211_-	helix-turn-helix domain-containing protein	H6WRX5	Salmonella_phage	8.3e-12	47.2
WP_001038966.1\|2743330_2743741_+	helix-turn-helix domain-containing protein	A0A1B5FPF4	Escherichia_phage	8.1e-07	42.4
WP_014343821.1\|2743790_2744051_+	hypothetical protein	NA	NA	NA	NA
WP_000917564.1\|2744043_2744202_+	hypothetical protein	H6WRX3	Salmonella_phage	1.2e-22	98.1
WP_001668146.1\|2744223_2744523_+	hypothetical protein	S4TSN6	Salmonella_phage	8.1e-49	84.5
WP_000017118.1\|2744649_2747535_+	exodeoxyribonuclease	S4TNL0	Salmonella_phage	0.0e+00	97.2
WP_001539618.1\|2747497_2748655_+	recombinase RecT	S4TTE8	Salmonella_phage	1.6e-217	100.0
WP_001237031.1\|2748697_2748937_+	DUF4060 family protein	S4TR31	Salmonella_phage	2.0e-37	100.0
WP_000065276.1\|2748977_2749226_+	excisionase family protein	S4TND0	Salmonella_phage	4.7e-42	100.0
WP_001262306.1\|2749270_2750563_+\|integrase	site-specific integrase	S4TSP2	Salmonella_phage	1.0e-252	99.8
WP_000191399.1\|2750757_2751960_+	nicotinate phosphoribosyltransferase	NA	NA	NA	NA
WP_000893207.1\|2752037_2753474_-	sodium:alanine symporter family protein	NA	NA	NA	NA
WP_000544849.1\|2753718_2754933_-	diaminopropionate ammonia-lyase	NA	NA	NA	NA
WP_000762342.1\|2755249_2755711_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
WP_000117870.1\|2755911_2757312_+\|tRNA	asparagine--tRNA ligase	A0A167RLM0	Powai_lake_megavirus	4.5e-81	35.1
2768458:2768477	attR	NA	NA	NA	NA

DBSCAN-SWA_9

2821478 : 2830208

Enterobacteria_phage(16.67%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_085983316.1\|2821478_2822733_+\|transposase	IS3-like element ISSen1 family transposase	Q6H9S3	Enterobacteria_phage	5.4e-17	33.9
WP_000502119.1\|2823196_2823655_-\|transposase	IS200/IS605-like element IS200F family transposase	I4AZI8	Saccharomonospora_phage	1.0e-13	31.5
WP_000934063.1\|2823846_2826123_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	6.2e-165	42.3
WP_000520789.1\|2826153_2826474_-\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	4.5e-13	45.7
WP_000447499.1\|2826797_2827019_+	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	9.3e-18	64.2
WP_001201749.1\|2829089_2830208_-	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.4e-08	38.9

DBSCAN-SWA_10

3436365 : 3479778

Salmonella_virus(67.21%)

lysis,portal,coat,terminase,integrase,protease

attL 3427090:3427106|attR 3488993:3489009

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3427090:3427106	attL	NA	NA	NA	NA
WP_014343801.1\|3436365_3438288_+	acyltransferase	A0A1R3Y5Q6	Salmonella_virus	0.0e+00	100.0
WP_001280422.1\|3438327_3440313_-	endorhamnosidase	A0A1R3Y5S2	Salmonella_virus	0.0e+00	100.0
WP_000868978.1\|3440468_3442436_-	hypothetical protein	A0A1R3Y5Q1	Salmonella_virus	0.0e+00	100.0
WP_050772884.1\|3442435_3443773_-	DNA transfer protein	A0A1R3Y5Q4	Salmonella_virus	1.0e-244	100.0
WP_000964892.1\|3443815_3444505_-	hypothetical protein	A0A1R3Y5P8	Salmonella_virus	4.0e-91	100.0
WP_000627700.1\|3444507_3444963_-	DUF2824 family protein	A0A1R3Y5P3	Salmonella_virus	1.8e-87	100.0
WP_000774926.1\|3444962_3445664_-	hypothetical protein	A0A1R3Y5X6	Salmonella_virus	1.2e-74	100.0
WP_001122423.1\|3445667_3447086_-	Packaged DNA stabilization protein gp10	E7C9U1	Salmonella_phage	4.6e-275	99.4
WP_001166103.1\|3447045_3447546_-	packaged DNA stabilization protein p27	Q76H19	Enterobacteria_phage	4.2e-90	100.0
WP_000538676.1\|3447529_3448090_-	hypothetical protein	A0A1R3Y5P2	Salmonella_virus	1.1e-102	100.0
WP_001196932.1\|3448130_3449423_-\|coat	coat protein	A0A1R3Y5Q0	Salmonella_virus	1.1e-243	100.0
WP_000433856.1\|3449422_3450334_-	scaffold protein	A0A1R3Y5R6	Salmonella_virus	4.9e-161	100.0
WP_000774719.1\|3450347_3452525_-\|portal	portal protein	A0A1R3Y5N6	Salmonella_virus	0.0e+00	100.0
WP_000417855.1\|3452524_3454024_-\|terminase	terminase	A0A1R3Y5N2	Salmonella_virus	2.8e-307	100.0
WP_000729927.1\|3454001_3454490_-	hypothetical protein	A3EYX3	Salmonella_phage	2.9e-88	100.0
WP_000252708.1\|3454513_3454693_-	hypothetical protein	A0A2H4A350	Salmonella_phage	1.1e-24	100.0
WP_000807793.1\|3454694_3454937_-	DUF2560 family protein	A0A1R3Y5V5	Salmonella_virus	1.7e-36	100.0
WP_001279869.1\|3455244_3455505_+	hypothetical protein	A0A089FW14	Salmonella_phage	6.6e-39	100.0
WP_000881329.1\|3455766_3456372_-	hypothetical protein	A0A1R3Y613	Salmonella_virus	1.4e-111	100.0
WP_024132441.1\|3456521_3456959_-\|lysis	lysis protein	A0A1R3Y6Z8	Salmonella_virus	1.8e-73	100.0
WP_024132440.1\|3457047_3457545_-	lysozyme	A0A1R3Y5W5	Salmonella_virus	1.7e-91	100.0
WP_000286100.1\|3457522_3457726_-	hypothetical protein	I6R0S9	Salmonella_phage	1.1e-33	100.0
WP_000027547.1\|3458190_3458709_-	DUF1133 family protein	A0A1R3Y5U9	Salmonella_virus	2.0e-95	100.0
WP_000219141.1\|3458705_3458885_-	hypothetical protein	E7C9S6	Salmonella_phage	1.3e-22	94.9
WP_000188966.1\|3458865_3459069_-	protein ninH	A0A1R3Y5V4	Salmonella_virus	1.6e-32	100.0
WP_000034927.1\|3459065_3459290_-	hypothetical protein	A0A1R3Y5U5	Salmonella_virus	1.3e-38	100.0
WP_001108030.1\|3459286_3459898_-	recombination protein NinG	A3EYW8	Salmonella_phage	9.3e-100	100.0
WP_000566860.1\|3459890_3460061_-	protein ninF	A0A1R3Y5V0	Salmonella_virus	2.5e-26	100.0
WP_000113766.1\|3460057_3460240_-	NinE family protein	C6ZR57	Salmonella_phage	5.7e-29	100.0
WP_000815503.1\|3460376_3460823_-	recombination protein NinB	A0A1R3Y605	Salmonella_virus	7.1e-81	100.0
WP_001277267.1\|3460779_3460968_-	hypothetical protein	A0A1R3Y6Z7	Salmonella_virus	4.2e-27	100.0
WP_024132439.1\|3460970_3461264_-	hypothetical protein	A0A1R3Y5V7	Salmonella_virus	1.2e-47	100.0
WP_000654039.1\|3461494_3461767_-	DUF4752 family protein	A0A1R3Y5T8	Salmonella_virus	7.2e-44	100.0
WP_001036040.1\|3461838_3462108_-	hypothetical protein	A0A1R3Y5U7	Salmonella_virus	6.4e-45	100.0
WP_001248408.1\|3462104_3463481_-	AAA family ATPase	A0A1R3Y5T0	Salmonella_virus	1.5e-254	100.0
WP_000067074.1\|3463477_3464311_-	replication protein	A0A1R3Y5R9	Salmonella_virus	3.8e-152	100.0
WP_001125981.1\|3464303_3464450_-	DUF2740 domain-containing protein	A0A075B8K7	Enterobacteria_phage	1.5e-19	100.0
WP_001103492.1\|3464484_3464766_-	hypothetical protein	Q76H54	Enterobacteria_phage	4.3e-44	100.0
WP_000182204.1\|3464876_3465092_-	helix-turn-helix domain-containing protein	Q76H55	Enterobacteria_phage	1.3e-32	100.0
WP_000712403.1\|3465202_3465892_+	helix-turn-helix transcriptional regulator	Q76H56	Enterobacteria_phage	1.3e-126	100.0
WP_000248006.1\|3465980_3466904_+	hypothetical protein	A0A1R3Y6Z6	Salmonella_virus	1.5e-181	100.0
WP_000786969.1\|3466939_3467149_-	fumarate hydratase FumD	I6R0R9	Salmonella_phage	5.5e-28	91.3
WP_000216172.1\|3467512_3467845_+	hypothetical protein	A0A1R3Y5R1	Salmonella_virus	2.2e-55	100.0
WP_000246164.1\|3467923_3468124_+	Restriction inhibitor protein ral	A0A1R3Y5S4	Salmonella_virus	1.0e-31	100.0
WP_014343793.1\|3468163_3468463_+	hypothetical protein	A0A1R3Y5U4	Salmonella_virus	2.3e-51	100.0
WP_001200113.1\|3468786_3468939_+\|protease	protease FtsH-inhibitory lysogeny factor CIII	A0A1R3Y5R2	Salmonella_virus	2.7e-24	100.0
WP_000156730.1\|3468919_3469108_+	hypothetical protein	A0A1R3Y5S5	Salmonella_virus	1.6e-31	100.0
WP_001046981.1\|3469237_3469945_+	recombinase	A0A1R3Y600	Salmonella_virus	4.1e-139	100.0
WP_001253476.1\|3469944_3470229_+	sigma-70 family RNA polymerase sigma factor	Q76H41	Enterobacteria_phage	1.4e-45	100.0
WP_001111312.1\|3470275_3470569_+	DUF2856 family protein	A0A1R3Y5T7	Salmonella_virus	3.2e-50	100.0
WP_001214771.1\|3470579_3470750_+	DUF2737 family protein	A0A220NQV6	Salmonella_phage	6.1e-25	100.0
WP_000665854.1\|3470746_3471157_+	hypothetical protein	A0A1R3Y5S0	Salmonella_virus	5.9e-74	100.0
WP_001017880.1\|3471153_3471798_+	ead/Ea22-like family protein	A0A1R3Y5T1	Salmonella_virus	2.3e-117	100.0
WP_000582225.1\|3471797_3472553_+	hypothetical protein	A0A1R3Y5Q7	Salmonella_virus	2.9e-151	100.0
WP_000208072.1\|3472563_3473529_+	DUF550 domain-containing protein	A0A1R3Y5Q8	Salmonella_virus	2.9e-172	100.0
WP_000002128.1\|3473521_3473806_+	ASCH domain-containing protein	A0A1R3Y5R3	Salmonella_virus	4.1e-50	100.0
WP_128190834.1\|3473874_3474471_+	hypothetical protein	A0A1R3Y5P7	Salmonella_virus	3.2e-113	100.0
WP_000051899.1\|3474708_3475872_+\|integrase	site-specific integrase	A0A192Y6Q1	Salmonella_phage	4.1e-229	99.7
WP_000893231.1\|3476077_3477328_-	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	1.6e-98	47.5
WP_001285275.1\|3477339_3478443_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	6.9e-61	39.8
WP_001043675.1\|3478725_3479778_+	phosphoporin PhoE	Q1MVN1	Enterobacteria_phage	1.7e-112	58.5
3488993:3489009	attR	NA	NA	NA	NA

DBSCAN-SWA_11

4236460 : 4280978

Burkholderia_phage(42.86%)

tail,plate,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001182237.1\|4236460_4237459_-\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
WP_001039339.1\|4237546_4238857_-	conjugal transfer protein TraF	NA	NA	NA	NA
WP_000416272.1\|4239103_4239619_+	zinc uptake transcriptional repressor Zur	NA	NA	NA	NA
WP_001030592.1\|4239717_4239927_-	CsbD family protein	NA	NA	NA	NA
WP_010989093.1\|4239948_4240062_-	hypothetical protein	NA	NA	NA	NA
WP_001128116.1\|4240058_4241384_-	MATE family efflux transporter DinF	NA	NA	NA	NA
WP_000646079.1\|4241562_4242171_-	repressor LexA	Q9G0C2	Lactococcus_phage	1.0e-13	38.0
WP_000002902.1\|4242279_4242648_-	diacylglycerol kinase	NA	NA	NA	NA
WP_000017359.1\|4242818_4245239_+	glycerol-3-phosphate 1-O-acyltransferase PlsB	NA	NA	NA	NA
WP_000455249.1\|4245337_4246210_-	4-hydroxybenzoate octaprenyltransferase	NA	NA	NA	NA
WP_000019219.1\|4246223_4246721_-	chorismate lyase	NA	NA	NA	NA
WP_000782504.1\|4246901_4247819_-	maltose operon protein MalM	NA	NA	NA	NA
WP_000973645.1\|4247982_4249341_-	maltoporin	NA	NA	NA	NA
WP_000179176.1\|4249429_4250539_-	maltose/maltodextrin ABC transporter ATP-binding protein MalK	Q6GZ03	Mycoplasma_phage	6.2e-17	47.2
WP_000695417.1\|4250900_4252091_+	maltose/maltodextrin ABC transporter substrate-binding protein MalE	NA	NA	NA	NA
WP_000382573.1\|4252222_4253767_+	maltose ABC transporter permease MalF	NA	NA	NA	NA
WP_001252085.1\|4253781_4254672_+	maltose ABC transporter permease MalG	NA	NA	NA	NA
WP_000982749.1\|4254837_4255248_-	phosphate-starvation-inducible protein PsiE	NA	NA	NA	NA
WP_000750804.1\|4255390_4257487_-	YjbH domain-containing protein	NA	NA	NA	NA
WP_000977979.1\|4257486_4258224_-	capsule biosynthesis GfcC family protein	NA	NA	NA	NA
WP_014343934.1\|4258220_4258889_-	YjbF family lipoprotein	NA	NA	NA	NA
WP_001541297.1\|4258922_4259165_-	outer membrane protein	NA	NA	NA	NA
WP_000790037.1\|4259608_4261258_-	glucose-6-phosphate isomerase	NA	NA	NA	NA
WP_000136400.1\|4261602_4262952_+	lysine-sensitive aspartokinase 3	NA	NA	NA	NA
WP_000615248.1\|4263084_4263432_-	DNA-binding protein	Q6QIE8	Burkholderia_phage	4.9e-21	51.5
WP_001226442.1\|4264007_4264295_+	membrane protein	Q6QIC8	Burkholderia_phage	2.3e-16	49.1
WP_001270441.1\|4264297_4264903_+	transglycosylase SLT domain-containing protein	Q5ZQZ1	Pseudomonas_phage	2.5e-60	59.9
WP_000777266.1\|4264915_4265230_+	membrane protein	Q6QIC4	Burkholderia_phage	6.4e-20	49.1
WP_000449433.1\|4265389_4265845_+	hypothetical protein	NA	NA	NA	NA
WP_000875314.1\|4265841_4266039_+	hypothetical protein	Q6QIB1	Burkholderia_phage	8.6e-07	52.9
WP_000729852.1\|4266028_4267456_+\|tail	phage tail sheath family protein	A4JWK5	Burkholderia_virus	1.1e-194	70.9
WP_000907494.1\|4267455_4267980_+\|tail	phage major tail tube protein	Q6QIA9	Burkholderia_phage	2.8e-68	69.5
WP_001003642.1\|4268031_4268349_+\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_001185654.1\|4268308_4268437_+\|tail	GpE family phage tail protein	NA	NA	NA	NA
WP_001262500.1\|4268533_4270888_+\|tail	phage tail tape measure protein	A4JWL0	Burkholderia_virus	6.9e-66	30.6
WP_000271423.1\|4270887_4271841_+	methyl-accepting chemotaxis protein	A4JWL1	Burkholderia_virus	2.3e-36	50.8
WP_001269716.1\|4271840_4272050_+	membrane protein	A4JWL2	Burkholderia_virus	9.8e-17	60.3
WP_000818154.1\|4272037_4273081_+	phage late control D family protein	Q6QIA2	Burkholderia_phage	2.5e-76	45.1
WP_000679398.1\|4273090_4273813_+\|plate	phage baseplate assembly protein V	A0A067ZIM2	Vibrio_phage	3.3e-11	41.0
WP_000593182.1\|4274140_4274503_+	GtrA family protein	I1TED9	Salmonella_phage	1.2e-43	70.8
WP_000703632.1\|4274499_4275429_+	glycosyltransferase family 2 protein	S5FKN0	Shigella_phage	8.8e-150	83.8
WP_001095011.1\|4275428_4276976_+	membrane protein	B9UDL6	Salmonella_phage	1.9e-48	29.9
WP_001093501.1\|4277139_4277499_+\|plate	baseplate protein	Q6QIA0	Burkholderia_phage	2.8e-35	64.2
WP_000951736.1\|4277489_4278605_+\|plate	baseplate protein	Q6QI99	Burkholderia_phage	1.8e-101	52.2
WP_000359500.1\|4278597_4279230_+\|tail	phage tail protein I	Q6QI98	Burkholderia_phage	6.6e-24	56.4
WP_000368196.1\|4279232_4280978_+\|tail	tail protein	A0A0M3ULF6	Salmonella_phage	3.2e-52	52.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP046284

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP046284_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046284_1

16361-16452

Orphan

Consensus_repeat	Method
TGAAAAAGTGAAAAAATTTCACTTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP046284_1

>merge|NZ_CP046284|1|16361-16452|CRISPRCasFinder
TGAAAAAGTGAAAAAATTTCACTTTATTTTATCATCATAATCACCAAATCAACGCGAAAAATAAGCGTGAAAAAGTGAAGAAATTTCACTTT

>NZ_CP046284|1|1|16361-16452|CRISPRCasFinder
TGAAAAAGTGAAAAAATTTCACTTT	ATTTTATCATCATAATCACCAAATCAACGCGAAAAATAAGCG
TGAAAAAGTGAAGAAATTTCACTTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046284.1\|WP_156004658.1\|16098_16350_-\|XRE-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP046284.1\|WP_156004654.1\|8627_10586_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|319263
NZ_CP046284.1\|WP_000978012.1\|11787_12384_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046284.1\|WP_000151583.1\|24776_25847_-\|IncI1-type-conjugal-transfer-protein-TrbB	unknown	unknown	gnl\|CDD\|239318
NZ_CP046284.1\|WP_000157095.1\|17864_18200_-\|molybdopterin-guanine-dinucleotide-biosynthesis-protein-MobC	unknown	unknown	unknown
NZ_CP046284.1\|WP_062865724.1\|21601_22420_+\|DUF2971-domain-containing-protein	unknown	unknown	gnl\|CDD\|378585
NZ_CP046284.1\|WP_156004655.1\|12846_13347_+\|antirestriction-protein-ArdA	unknown	unknown	gnl\|CDD\|377800
NZ_CP046284.1\|WP_156004657.1\|14932_15835_+\|Rpn-family-recombination-promoting-nuclease/putative-transposase	unknown	unknown	gnl\|CDD\|182167
NZ_CP046284.1\|WP_156004663.1\|25865_27074_-\|IncI1-type-conjugal-transfer-protein-TrbA	unknown	unknown	unknown
NZ_CP046284.1\|WP_156004679.1\|27365_27518_+\|Hok/Gef-family-protein	unknown	unknown	gnl\|CDD\|182063
NZ_CP046284.1\|WP_001276261.1\|11071_11791_+\|plasmid-SOS-inhibition-protein-A	unknown	unknown	gnl\|CDD\|184260
NZ_CP046284.1\|WP_156004677.1\|10640_11075_+\|conjugation-system-SOS-inhibitor-PsiB	unknown	unknown	gnl\|CDD\|237477
NZ_CP046284.1\|WP_001329993.1\|15834_16068_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|273806
NZ_CP046284.1\|WP_156004656.1\|14601_14868_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046284.1\|WP_156004659.1\|18433_18766_+\|IncI1-type-relaxosome-accessory-protein-NikA	unknown	unknown	unknown
NZ_CP046284.1\|WP_032171888.1\|16930_17779_+\|DUF4942-domain-containing-protein	unknown	unknown	gnl\|CDD\|372683
NZ_CP046284.1\|WP_156004660.1\|18776_21479_+\|IncI1-type-relaxase-NikB	unknown	unknown	gnl\|CDD\|367497
NZ_CP046284.1\|WP_156004662.1\|22492_24784_-\|conjugal-transfer-protein-TrbC	unknown	unknown	unknown
NZ_CP046284.1\|WP_156004664.1\|27589_27841_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046284.1\|WP_000218863.1\|14075_14510_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP046284.1\|WP_156004658.1\|16098_16350_-\|XRE-family-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	0.00352347
NZ_CP046284.1\|WP_156004654.1\|8627_10586_+\|hypothetical-protein	gnl\|CDD\|319263	cd16406, ParB_N_like, ParB N-terminal, parA-binding, -like domain of bacterial and plasmid parABS partitioning systems. This family represents the N-terminal domain of ParB, a DNA-binding component of the prokaryotic parABS partitioning system. parABS contributes to the efficient segregation of chromosomes and low-copy number plasmids to daughter cells during prokaryotic cell division. The process includes the parA (Walker box) ATPase, the ParB DNA-binding protein and a parS cis-acting DNA sites. Binding of ParB to centromere-like parS sites is followed by non-specific binding to DNA ("spreading", which has been implicated in gene silencing in plasmid P1) and oligomerization of additional ParB molecules near the parS sites. It has been proposed that ParB-ParB cross-linking compacts the DNA, binds to parA via the N-terminal region, and leads to parA separating the ParB-parS complexes and the recruitment of the SMC (structural maintenance of chromosomes) complexes. The ParB N-terminal domain of Bacillus subtilis and other species contains a Arginine-rich ParB Box II with residues essential for bridging of the ParB-parS complexes. The arginine-rich ParB Box II consensus (I[VIL]AGERR[FYW]RA[AS] identified in several species is partially conserved with this family and related families. Mutations within the basic columns particularly debilitate spreading from the parS sites and impair SMC recruitment. The C-terminal domain contains a HTH DNA-binding motif and is the primary homo-dimerization domain, and binds to parS DNA sites. Additional homo-dimerization contacts are found along the N-terminal domain, but dimerization of the N-terminus may only occur after concentration at ParB-parS foci.	2.88943e-30
NZ_CP046284.1\|WP_000151583.1\|24776_25847_-\|IncI1-type-conjugal-transfer-protein-TrbB	gnl\|CDD\|239318	cd03020, DsbA_DsbC_DsbG, DsbA family, DsbC and DsbG subfamily; V-shaped homodimeric proteins containing a redox active CXXC motif imbedded in a TRX fold. They function as protein disulfide isomerases and chaperones in the bacterial periplasm to correct non-native disulfide bonds formed by DsbA and prevent aggregation of incorrectly folded proteins. DsbC and DsbG are kept in their reduced state by the cytoplasmic membrane protein DsbD, which utilizes the TRX/TRX reductase system in the cytosol as a source of reducing equivalents. DsbG differ from DsbC in that it has a more limited substrate specificity, and it may preferentially act later in the folding process to catalyze disulfide rearrangements in folded or partially folded proteins. Also included in the alignment is the predicted protein TrbB, whose gene was sequenced from the enterohemorrhagic E. coli type IV pilus gene cluster, which is required for efficient plasmid transfer.	7.61681e-40
NZ_CP046284.1\|WP_062865724.1\|21601_22420_+\|DUF2971-domain-containing-protein	gnl\|CDD\|378585	pfam11185, DUF2971, Protein of unknown function (DUF2971). This bacterial family of proteins has no known function.	9.12977e-09
NZ_CP046284.1\|WP_156004655.1\|12846_13347_+\|antirestriction-protein-ArdA	gnl\|CDD\|377800	pfam07275, ArdA, Antirestriction protein (ArdA). This family consists of several bacterial antirestriction (ArdA) proteins. ArdA functions in bacterial conjugation to allow an unmodified plasmid to evade restriction in the recipient bacterium and yet acquire cognate modification.	3.94327e-28
NZ_CP046284.1\|WP_156004657.1\|14932_15835_+\|Rpn-family-recombination-promoting-nuclease/putative-transposase	gnl\|CDD\|182167	PRK09956, PRK09956, ISNCY family transposase.	9.94435e-101
NZ_CP046284.1\|WP_156004679.1\|27365_27518_+\|Hok/Gef-family-protein	gnl\|CDD\|182063	PRK09759, PRK09759, type I toxin-antitoxin system toxin HokA.	3.89402e-11
NZ_CP046284.1\|WP_001276261.1\|11071_11791_+\|plasmid-SOS-inhibition-protein-A	gnl\|CDD\|184260	PRK13704, PRK13704, plasmid SOS inhibition protein A; Provisional.	4.71938e-119
NZ_CP046284.1\|WP_156004677.1\|10640_11075_+\|conjugation-system-SOS-inhibitor-PsiB	gnl\|CDD\|237477	PRK13701, psiB, conjugation system SOS inhibitor PsiB.	4.40364e-94
NZ_CP046284.1\|WP_001329993.1\|15834_16068_+\|hypothetical-protein	gnl\|CDD\|273806	TIGR01784, Uncharacterized_protein_pSLT051, conserved hypothetical protein (putative transposase or invertase). Several lines of evidence suggest that members of this family (loaded as a fragment mode model to find part-length matches) are associated with transposition, inversion, or recombination. Members are found in small numbers of genomes, but in large copy numbers in many of those species, including over 30 full length and fragmentary members in Treponema denticola. The strongest similarities are usually within rather than between species. PSI-BLAST shows similarity to proteins designated as possible transposases, DNA invertases (resolvases), and recombinases. In the oral pathogenic spirochete Treponema denticola, full-length members are often found near transporters or other membrane proteins. This family includes members of the putative transposase family pfam04754.	2.03929e-06
NZ_CP046284.1\|WP_032171888.1\|16930_17779_+\|DUF4942-domain-containing-protein	gnl\|CDD\|372683	pfam13708, DUF4942, Domain of unknown function (DUF4942). The function of this family is not known.	6.57268e-56
NZ_CP046284.1\|WP_156004660.1\|18776_21479_+\|IncI1-type-relaxase-NikB	gnl\|CDD\|367497	pfam03432, Relaxase, Relaxase/Mobilisation nuclease domain. Relaxases/mobilisation proteins are required for the horizontal transfer of genetic information contained on plasmids that occurs during bacterial conjugation. The relaxase, in conjunction with several auxiliary proteins, forms the relaxation complex or relaxosome. Relaxases nick duplex DNA in a specific manner by catalyzing trans-esterification.	2.41358e-66

>NZ_CP046284.1|WP_156004658.1|16098_16350_-|XRE-family-transcriptional-regulator
MTGWELRIWRKSMLWSREKAAREFGVTQRTWHAWENAEQVDVTVWRTTQALSIRDLLPHMQGMRKADIIRRLENELGETAEDV
>NZ_CP046284.1|WP_001329993.1|15834_16068_+|hypothetical-protein
MRTAKPGKIPGFFACRSRANSMTIAERLIQKGFEKGALEVAREIACRLRDMGWTPERIQEATGLSGEELKKLFPDEQ
>NZ_CP046284.1|WP_156004657.1|14932_15835_+|Rpn-family-recombination-promoting-nuclease/putative-transposase
MSKKKNTTTPTPHDAAFRSFLANPDVARDFLELHLPAEYRQLCDLSTLKLEPATFVEPDLHQYASDILWSMKTTGGEDGYVYTLIEHQSTENLYMPFRMLRYSVAAMQRHLEQHKTLPLVIPVLFYHGERSPYPYSMNWLDCFENPALAAKIYTKPFPLVDITVVDDNEIMNHRRMAALTLLMKHIRHRDMMELLDKLPKVMVEISDEQVRVLIHYIVNAGDSVSPEFMRALAERLPQHEDKLMTIAERLEQKGRQEGRMEGALEKALAIACQLQKMGMTPEQIKQATGLSDDELKKITH
>NZ_CP046284.1|WP_156004656.1|14601_14868_+|hypothetical-protein
MRPSIIFATAEYVKRLREECMRENKPLHRHTRFRRQELAQDEINPDVLAMSGHIARRCSEQKRVRIPAMKVSEWGHLLRALEIERVCH
>NZ_CP046284.1|WP_000218863.1|14075_14510_+|hypothetical-protein
MTVSSTISVFCRDGVFRTVYCHLHGEPTWNGRILHTHYATGQQAEALVEHGDIRCLGPRCDKPAGHTLQNPVDGVTAYYGRDSGFRMDSEAREYRSFREAIATESTEEVRFHYVFIDGYWKVMYRTPEGWKMKALALALRRCPK
>NZ_CP046284.1|WP_156004655.1|12846_13347_+|antirestriction-protein-ArdA
MSVVAPAVYVGTWHKYNCGSIAGRWFDLTTFDDERDFFAACRALHQDEADPELMFQDYEGFPGNMASECHINWAWVEGFRQARDEGCEEAYRLWVEDTGETDFDTFRDAWWGEADSEEAFAVEFASDTGLLADVPETVVLYFDYEAYARDLFLDSFTFIDGHVFRR
>NZ_CP046284.1|WP_000978012.1|11787_12384_+|hypothetical-protein
MMKSDEQYQVPVWMRPLLPLLCNTGGNDPEELLNDTETTASANIVRYVLIVAVRSQIDLLQLLYRKGLLRTEIPGGFSPEEAQELLDNLVRSHISKALSGERMAARDRNADLTWIRQQLVDAAWFVRATLEAHGMGVGNESPSAPPETMPDIQTRELVMLIKRLASSLKAVKPDSSVVREAQDWLCDRKLVDITDILR
>NZ_CP046284.1|WP_001276261.1|11071_11791_+|plasmid-SOS-inhibition-protein-A
MSARSRALIPLSAEQQAAMQAVAVTEQRRRQGRTLSAWPYASAFFRCLNGSRRISLTDLRFFAPALTKEEFHGNRLLWLAAVDKLIESFGEVCVLPLPSDAGHRLFPSVPFREGERRRQKTTLTEQKYSRQREREAERRELEYQTCFAQAQIDLAFHTPATVGSWLSRWSGVVEEHDLETIFWGWCGRFPSLSSFDRFFWQEEPLWRLIFEAGEAGRGAPVQVRALEQWMIPNKLENAI
>NZ_CP046284.1|WP_156004677.1|10640_11075_+|conjugation-system-SOS-inhibitor-PsiB
MKTELTLNALQSMNVQEYEDIRAAGSDMRRNLTHEVMREVDAPANWMMNGEYGSEFGGFFPVQVRFTPAHERFHLALCSPGDVSQLWMLVLVNGGGQPFAVVQVQHIFTPVAISHTLALAATLDAQGYSVNDIIHILMAEGGQA
>NZ_CP046284.1|WP_156004654.1|8627_10586_+|hypothetical-protein
MSVVKSEPDTTRKASRKSAKTQETVLSALLAQTEEVSVPLASLIKSPLNVRTVPYFAESVSELAESIKGVGLLQNLVVHALPGDRHGVAAGGRRLAALNMLAERGIIPADWPVRVKIIPQELATAASMTENGHRRDMHPAEQIAGFRAMAQEGKTPAQIGDLLGYSPRHVQRMLKLADLAPVILDALAEDRITTEHCQALALENDTTRQVQVFEAACQSGWGGKPDVRVIRNLITESEVAVAGNSKFRFVGADAFSPDELRTDLFSDDGDGYVDRVALDAALLEKLQAVAEYLREAEGWEWCAGRMEPVGECREDAGTYRCLPEPEAVLTEAEEERLNELMTRYDALENQCEESDLLEAEMKLMRCMAKVRAWTPEIRAGSGVVVSWCYGNVCVQRGVQLRSEDDVADDADRTEQVQEKASVEEISLPLLTKMSSERTLAVQAALMQQPDKSLALLAWTLCLNVFGSGAYSKPAQISLECKHYSLTSDAPSGKEGAAFMAMMAEKARLAALLPEGWSRDMATFLSLSQEVLLSLLSFCTACSIHGVQTREYGHTSRSPLDSLESAIGFHMRDWWQPTKANFFGHLKKPQIIDALNEAGLSGAARDAEKMKKGDAAEHAEHHMKDNRWVPGWMCAPHPQTDATERTDNLADAA
>NZ_CP046284.1|WP_032171888.1|16930_17779_+|DUF4942-domain-containing-protein
MNQTLPTADLNTAGTTDVIPSVAIDRIIAQRNEGIALFMQAMECLATARRILLDASGDIFLYGFEDCVTDSVRCMDKPEEAKKNITRLADRKIWDRLMTDTGMYTFMSSCQRDEWNSQLMSDTCPEITLDNVLATFRYLNASKMQTFEQGLIDVYRKLSWDYRTNNPCRLGKKIIIENLLYRWSNGRVTLDCSGREALDDLVRPFYLLEGRNVPDFRNSIGAQYGEFLGNGDNVGKLLEGEYFTVRGYQKGTVHIVFKRSDLVEKLNDIIARHYPGALPPRV
>NZ_CP046284.1|WP_000157095.1|17864_18200_-|molybdopterin-guanine-dinucleotide-biosynthesis-protein-MobC
MASKKFYSDDDIQLAKAALSELPDLTAQRKTLRDFLDAIRDDIIVLVRTKGYTLADVRDTLKNAGYEVGEKALRDIIREAESKKPSRRSSSKTAPKKTDSGRKDGIDMNNN
>NZ_CP046284.1|WP_156004659.1|18433_18766_+|IncI1-type-relaxosome-accessory-protein-NikA
MSDGAVRKKSEVRQKTVVRTLRFSPVEDETIRKKAEDSGLTVSAYIRNAALNKRINSRTDDAFLKELIRLGRMQKHLFVQGKRTGDKEYAEVLVAITELTNTLRKQLMEG
>NZ_CP046284.1|WP_156004660.1|18776_21479_+|IncI1-type-relaxase-NikB
MNAVIPKKRRDGKSSFEDLVSYVSVRDDMTDEELNLSSSSQAEQPHRSRFSRLVDYATRLRNESFVALVDVMKDGCEWVNFYGVTCFHNCTSLETAAADMEYIAQQAHYAKDNTDPVFHYILSWQAHESPRPEQIYDSVRHTLKSLGLGEHQYVSAVHTDTDNLHVHVAVNRVHPVTGYLNCLSWSQEKLSRACRELELKHGFAPDNGCWVHAPGNRIVRKTAVERDRQNAWTRGKKQTFREYVAQTAVAGLRSEPVHDWLSLHRRLAEDGLYLSQMDGKFLVMDGWDRNREGVQLDSFGPSWCAEKLMKKMGDYTPVPKDIFSQVEAPGRYNPDFIAADVRPEKIAETESLQQYACRHLGERLPEMAREGRLENCQAIHRTLAEAGLWMRVQHGHLVICDGYDHNQTPVRADSVWSLLTLDNVNQLDGGWQPVPTDIFRQVTPTERFRGRRMESCPATDKEWHRMRTGTGPQGAIKRELFSDKESLWGYSISHCSPQIEEMITQGEFTWQRCHELFAQQGLMLQKQHHGLVVVDAFNHEQTPVKASSIHPDLTLGRAEPQAGPFVSAPADLFDRVQPESRYNPELAVSDRYGVSSKRDPMLRRQRREARAEARADLRARYLAWREQWRKPDLRYGERCREIHQACRLRKSHIRAQYDDPALRKLHYHIAEVQRMQALIRLKEDIRDERQKLIADGKWYPPSYRQWVEIQAAQGDRAAVSQLRGWDYRDRRKDKSRTTTTDRCVVLCEPGGTPVYGNTGDLEARLQKNGSVRFRDRRTGEFVCTDYGDRVVFRNHHDRNALADKLDLIAPVLFGRDPRMGFEPEGNDKQFNQVFAEMVAWHNVTGRTGHEDYRITRPDVDHHREGSERYYRDYIAANSNDDASLPPPEQDKRWEPPSPMR
>NZ_CP046284.1|WP_062865724.1|21601_22420_+|DUF2971-domain-containing-protein
MSTNLAFRYASVETFFKMIENQELWFTDLRNMNDPEEYSAGYEIVKRIINEEFPDCIRLLEEVSPNKIDENCKILICCFCSDGDRSNMWSEYGDNGKGVAIGYDENIITQCHIFARFEEHFQPISGRVVFHPVIYSEELFREYVRKKLLAYINRSNLAIEFRHNLLHAHLIRLCSLYKRENFKSENEVRGLIEVNKHAYPPYSIEKRNTNFGIAYYHKVKFTYNNITAIREIVLGPLFEQSDEQFRSKLDDLGLKDIKIRRSICTYNDAVNL
>NZ_CP046284.1|WP_156004662.1|22492_24784_-|conjugal-transfer-protein-TrbC
MSEHRVNPELLHRTAWGNPVWNALQSLNIYGFCLVASLVASFIWPLALPACLLFTLITMLVFSLQRWRCPLRMPMTLECADPSQDRMIKRSLFSFWPTLFQYEVILESPASGIFYVGYQRVRDIGRELWLSMDDLTRHIMFFATTGGGKTETIFAWAINPLCWARGFTLVDGKAQNDTARTIWYLARRFGREDDVEVINFMNGGKSRSEIILSGEKTRPQSNTWNPFCYSTEAFTAETMQSMLPQNVQGGEWQSRAIAMNKALVFGTKFWCVREGKTMSLQMLREHMTLEGMAKLYCRGLDDQWPEEAIAPLRNYLQDVPGFDLSLVRTPSAWTEEPRKQHAYLSGQFSETFSTFTEAFGDIFAEDSGDIDIRDSIHSDRILMVMIPALDTSAHTTSALGRMFITQKSMILARDLGYRLEGTDSDALEVKKYKGRFPYLCFLDEVGAYYTDRIAVEATQVRSLDFALILMAQDQERIEGQTTATNTATLMQNTGTKFAGRIVSEGSTARTLKSAAGEEARARMNNLQRQDGIFGESWIDSPQISILMESKINVQELIELHPGEFFSIFRGETVPSASFFIPDDEKSCSSDPVVINRYISVDAPRLDRLRRLVPRTTQRRIPSPENVSAIIGVLTAKPSRKRRKIRTEPHTIVDTFQQRIAGRQAAMAMLEEYDTDINARESALWETAVNTLKTTTREERRIRYITLNRPELTETKEENQISVKAERAGINLLTFPQDNNHPTERPVNGFHHKKTNRPDWDGMY
>NZ_CP046284.1|WP_000151583.1|24776_25847_-|IncI1-type-conjugal-transfer-protein-TrbB
MTIEYFATRIAKHISVQAIWPDGRTEIIAVLPRDALSGLVTRNNQLIHIAFDAMGTRNRETVLIDKQEHNADQILTAIDSCLRLEYLMERRFSRTPLFRGIIASVVLFVMATIGFSLFRYVDRVFWDDTTPEAVQTAGEPRLLPPHLNHTVPLNEGIQLPVPPKKDVQVPEKTITSKNPEAAAARHNLATVLKRNADRGMFTINLSSGHERTLFAFLDPACPNCRLLEPALKRLASDFNVVIYPVSVIGGEESTDRVAPLLCEKDAQKRAAGWHRLYSADNGMMTPSEETTPADETCLKAARAAIDVNNVAFRKFGFAGTPWVLSDTGWHLPTGILQETGTLNLFLKTTDSESGHE
>NZ_CP046284.1|WP_156004663.1|25865_27074_-|IncI1-type-conjugal-transfer-protein-TrbA
MSYNRQPVAEDPMQIWGAVGVLLILLLFVIWLFLPEVVYASCLILHTLWGLVDWGPFHNYAAPRYNLLAMTGNNAANISYSQWVNVMEQTIGILWMYLLPVTLWCLWEWYQHPGQSRFTRRPVDITRLPHIFASLSPAIAPVLADGDPEKLFHGGKRPERRVALTPEAFVEQHTLITNMQLDVAAARRCFMAQLGKPLTSWKDMAPHEKALFAIFGLQYFLDDRKAALKLMDTLNLSCRIKSKRDSGKFCTPVYSLAKSAFQRVIKSNGAQQWLKQHRYVRSGLVWLYAHDLRLTPPNWIWLKGVDRTLFYALHRANTTKGFIEGAGVVAVARAEAEAMRFGLPCPEPCVDEAVEGLRRDMLSLGLIWDEPQPDRDRKRRILTNWSLTDDILPPTPATDNEF
>NZ_CP046284.1|WP_156004679.1|27365_27518_+|Hok/Gef-family-protein
MPQRTFLMMLIVICVTILCFVWRVRDSLCGLRLQQGNTVLVATLAYEVKR
>NZ_CP046284.1|WP_156004664.1|27589_27841_-|hypothetical-protein
MPEKWSKEFDSCFQVGSIEEIADALEKRSGSEENALAMLAMTAFTLMTRRGICEMQNVAPDGKGIRLELIGFRENETIPDTLH

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP038793	Escherichia coli strain PF9285 plasmid pDW54_2, complete sequence	23317-23358	0	1.0
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP046284	Salmonella enterica strain FDAARGOS_687 plasmid unnamed2, complete sequence	16386-16427	0	1.0
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	CP042951	Escherichia coli strain D8-1 plasmid pD8-1_2, complete sequence	101168-101209	0	1.0
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP053733	Escherichia coli strain CP55_Sichuan plasmid pCP55-141k, complete sequence	55580-55621	0	1.0
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP014199	Escherichia coli strain MRE600 plasmid pMRE600-1, complete sequence	30288-30329	0	1.0
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NC_009788	Escherichia coli O139:H28 str. E24377A plasmid pETEC_73, complete sequence	60802-60843	0	1.0
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	CP053754	Shigella sonnei strain 506 plasmid pMHMC-003, complete sequence	65383-65424	0	1.0
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_LT985300	Escherichia coli strain ECOR 24 genome assembly, plasmid: RCS90_pI	20154-20195	0	1.0
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP051713	Escherichia coli strain SCU-123 plasmid pSCU-123-2, complete sequence	27461-27502	0	1.0
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NC_025145	Escherichia coli plasmid pL2-87, complete sequence	6073-6114	0	1.0
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP024254	Escherichia coli strain ATCC 43886 plasmid unnamed1, complete sequence	87983-88024	0	1.0
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP015141	Escherichia coli strain Ecol_732 plasmid pEC732_3, complete sequence	77383-77424	0	1.0
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	CP054380	Escherichia coli strain SCU-175 plasmid pSCU-175-1, complete sequence	32104-32145	0	1.0
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP022673	Shigella sonnei strain 866 plasmid p866, complete sequence	84355-84396	0	1.0
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_MK396099	Escherichia coli strain Ec20-Lar plasmid unnamed, complete sequence	87907-87948	0	1.0
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_MK455767	Escherichia coli strain Ec-2Lar plasmid pB-Ec2, complete sequence	77036-77077	0	1.0
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP023350	Escherichia coli strain ETEC-2264 plasmid unnamed1, complete sequence	108360-108401	1	0.976
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	CP035009	Shigella sonnei strain LC1477/18 plasmid pLC1477_18-1, complete sequence	29065-29106	2	0.952
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP025846	Escherichia coli strain 720632 plasmid p720632_86, complete sequence	20408-20449	2	0.952
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP018638	Salmonella enterica subsp. enterica serovar Enteritidis strain 69-3861 plasmid pSE69-3861-1, complete sequence	32309-32350	2	0.952
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP012835	Salmonella enterica subsp. enterica serovar Cerro str. CFSAN001588 plasmid pCFSAN001588_002, complete sequence	45703-45744	2	0.952
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP014096	Shigella sonnei strain FDAARGOS_90 plasmid unnamed1, complete sequence	31427-31468	2	0.952
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_LT985283	Escherichia coli strain 13942-1 genome assembly, plasmid: RCS74_pI	36533-36574	2	0.952
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP051720	Escherichia coli strain SCU-116 plasmid pSCU-116-1, complete sequence	24577-24618	2	0.952
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP030191	Salmonella enterica strain SA20104250 plasmid pSA20104250.1, complete sequence	51493-51534	2	0.952
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP024150	Escherichia coli strain 14EC033 plasmid p14EC033c, complete sequence	12542-12583	2	0.952
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP042248	Escherichia coli strain BCE049 plasmid pBCE049-2, complete sequence	49319-49360	2	0.952
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP015916	Escherichia coli strain 210205630 isolate 210205630 plasmid pSLy4, complete sequence	2220-2261	2	0.952
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP031111	Escherichia coli strain AMSCJX02 plasmid pAMSC6, complete sequence	71123-71164	2	0.952
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP027135	Escherichia coli strain AR_0369 plasmid unnamed3	46686-46727	2	0.952
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	CP049613	Escherichia coli O157:H7 strain K1516 plasmid pK1516-1	59736-59777	2	0.952
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_MH287044	Escherichia coli strain 5.1-R1 plasmid pCERC6, complete sequence	32132-32173	2	0.952
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_MF344576	Escherichia coli strain 15061806 plasmid p61806-CTXM, complete sequence	50165-50206	2	0.952
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_MG299151	Shigella sonnei strain SH287-2 plasmid pSH287-2, complete sequence	47227-47268	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_KY471628	Shigella sonnei strain SH15sh99 plasmid pSH15sh99, complete sequence	41667-41708	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_MG299131	Shigella sonnei strain SH271-2 plasmid pSH271-2, complete sequence	47227-47268	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_KY471629	Shigella sonnei strain SH15sh105 plasmid pSH15sh104, complete sequence	41667-41708	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_MG299133	Shigella sonnei strain SH272-2 plasmid pSH272-2, complete sequence	47227-47268	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_KX246268	Escherichia coli strain RD174 plasmid pHNRD174, complete sequence	29503-29544	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP025625	Escherichia coli strain SCEC020007 plasmid pBOKZ_020007, complete sequence	26453-26494	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_MG299128	Shigella sonnei strain SH262-2 plasmid pSH262-2, complete sequence	47227-47268	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_MG299147	Shigella sonnei strain SH284-2 plasmid pSH284-2, complete sequence	47227-47268	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_KT282968	Escherichia coli strain EC012 plasmid pEC012, complete sequence	84309-84350	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP025455	Salmonella enterica subsp. enterica serovar Agona strain USDA-ARS-USMARC-76334 plasmid pSAG-76334, complete sequence	40377-40418	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	CP052795	Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0125 plasmid pN19S0125, complete sequence	105736-105777	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_KP987217	Klebsiella pneumoniae strain 628 plasmid p628-CTXM, complete sequence	29496-29537	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_KM409652	Escherichia coli strain REL5382 plasmid pB15, complete sequence	41251-41292	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_KM085449	Escherichia coli O104:H7 strain RM9387 plasmid pO104_H7, complete sequence	156449-156490	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_KP198616	Escherichia coli strain C0996A plasmid pCTXM123_C0996, complete sequence	53715-53756	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_KJ866866	Escherichia coli strain SKLX3330 plasmid pSKLX3330, complete sequence	58150-58191	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP015246	Escherichia coli O91 str. RM7190 plasmid pRM7190-2, complete sequence	438-479	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP045742	Escherichia coli strain DH5alpha plasmid pTHNK130-1, complete sequence	173510-173551	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP028485	Escherichia coli strain E41-1 plasmid p2, complete sequence	43326-43367	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP010142	Escherichia coli strain D3 plasmid B, complete sequence	24228-24269	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP031907	Escherichia coli O91:H21 strain FWSEC0008 plasmid unnamed17, complete sequence	98762-98803	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	CP052804	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S973 plasmid pN17S0973, complete sequence	163753-163794	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	CP038508	Salmonella enterica subsp. enterica serovar Infantis strain FARPER-219 plasmid p-F219, complete sequence	292766-292807	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	CP052802	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S976 plasmid pN17S0976, complete sequence	137187-137228	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	CP042949	Escherichia coli strain ATCC 51435 plasmid pB2F1, complete sequence	31299-31340	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP009105	Escherichia coli strain RM9387 plasmid pO104_H7, complete sequence	156448-156489	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	CP052788	Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0611 plasmid pN19S0611, complete sequence	62840-62881	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	CP052840	Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S024 plasmid pN16S024, complete sequence	268177-268218	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP039714	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014853 plasmid p09-3649.1, complete sequence	12953-12994	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	CP052786	Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0641 plasmid pN19S0641, complete sequence	74770-74811	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	CP052838	Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S097 plasmid pN16S097, complete sequence	74017-74058	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	CP051676	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1234 plasmid pN16S1234, complete sequence	261211-261252	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	CP052783	Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0679 plasmid pN19S0679-1, complete sequence	22692-22733	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	CP052836	Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S103 plasmid pN16S103, complete sequence	158870-158911	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NC_023329	Escherichia coli strain B3804 plasmid pIFM3804, complete sequence	45943-45984	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP009052	Escherichia coli NCCP15648 plasmid p15648-2, complete sequence	26046-26087	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP016572	Salmonella enterica subsp. enterica serovar Heidelberg strain AMR588-04-00320 plasmid pAMR588-04-00320_99, complete sequence	41778-41819	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP041959	Escherichia coli strain EC2 plasmid pEC2_4, complete sequence	28623-28664	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP015161	Escherichia coli strain Eco889 plasmid pECO-93a, complete sequence	30692-30733	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	MH579767	Salmonella enterica subsp. enterica serovar Typhi strain SAL-18-0989 isolate B plasmid pSTY-blaCTX-M-65, complete sequence	23280-23321	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	CP052781	Salmonella enterica strain CVM N19S0949 plasmid pN19S0949, complete sequence	55397-55438	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	CP052834	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S041 plasmid pN17S0041, complete sequence	153933-153974	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	CP045527	Shigella sonnei strain 6607.69 plasmid p6607-69, complete sequence	30186-30227	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP032264	Escherichia coli strain AR_0089 plasmid unnamed2, complete sequence	74317-74358	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	CP052793	Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0388 plasmid pN19S0388, complete sequence	175651-175692	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	CP052779	Salmonella enterica strain 19TN07GT06K-S plasmid pN19S1233, complete sequence	289847-289888	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	CP052832	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1040 plasmid pN17S1040, complete sequence	20190-20231	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP016387	Salmonella enterica subsp. enterica serovar Typhimurium strain 13-931 plasmid p931IncI1, complete sequence	80864-80905	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP018993	Escherichia coli strain Ecol_AZ147 plasmid pECAZ147_2, complete sequence	103261-103302	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP034821	Salmonella sp. SSDFZ54 plasmid pTB502, complete sequence	68262-68303	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	CP052830	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1105 plasmid pN17S1105, complete sequence	53165-53206	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NC_012487	Escherichia coli plasmid pO26-Vir, complete sequence	152400-152441	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP050747	Salmonella enterica subsp. enterica serovar Typhimurium strain ST53 plasmid pST53-2, complete sequence	40470-40511	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	CP052828	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1126 plasmid pN17S1126, complete sequence	267492-267533	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	LN735558	Escherichia coli plasmid pC193, complete sequence, strain C193	69179-69220	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	LN735559	Escherichia coli plasmid pM105, complete sequence, strain M105	67939-67980	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	LN735560	Escherichia coli plasmid pV408, complete sequence, strain V408	59598-59639	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	LN735561	Escherichia coli plasmid pC271, complete sequence, strain C271	70002-70043	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP021208	Escherichia coli strain strain Z247 plasmid p2474-3, complete sequence	56553-56594	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP019205	Salmonella enterica subsp. enterica serovar Saintpaul strain CFSAN004173 plasmid pCFSAN004173, complete sequence	74548-74589	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_LT985321	Escherichia coli strain ECOR 3 genome assembly, plasmid: RCS85_pI	43560-43601	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	CP052826	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1245 plasmid pN17S0637, complete sequence	251492-251533	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP051702	Escherichia coli strain SCU-125 plasmid pSCU-125-2, complete sequence	31393-31434	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP005999	Escherichia coli B7A plasmid pEB1, complete sequence	43603-43644	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP040808	Escherichia fergusonii strain EFCF056 plasmid pEF03, complete sequence	33884-33925	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP024822	Escherichia coli strain CREC-591 plasmid pCREC-591_1, complete sequence	36630-36671	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP024481	Escherichia coli strain 2011C-4315 plasmid unnamed2, complete sequence	33974-34015	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP036181	Escherichia coli strain WCHEC025970 plasmid p2_025970, complete sequence	43047-43088	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	CP010831	Shigella sonnei strain FORC_011 plasmid pFORC11.2, complete sequence	38250-38291	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP016409	Salmonella enterica subsp. enterica serovar Infantis strain FSIS1502916 plasmid pFSIS1502916, complete sequence	235443-235484	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP051745	Escherichia coli strain SCU-484 plasmid pSCU-484-1, complete sequence	25507-25548	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	CP052824	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1265 plasmid pN17S1265, complete sequence	232007-232048	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	CP052822	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1349 plasmid pN17S1349, complete sequence	251424-251465	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	CP054459	Escherichia coli strain SCU-103 plasmid pSCU-103-2	25006-25047	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP016516	Salmonella enterica subsp. enterica serovar Heidelberg strain 11-004736-1-7 plasmid p11-004736-1-7_99, complete sequence	41777-41818	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP016407	Salmonella enterica subsp. enterica serovar Infantis strain FSIS1502169 plasmid pFSIS1502169, complete sequence	235443-235484	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	CP052820	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1442 plasmid pN17S1442, complete sequence	235438-235479	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP014972	Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1898 isolate ST073 plasmid pSTY1-1898, complete sequence	35398-35439	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP016413	Salmonella enterica subsp. enterica serovar Infantis strain CVM44454 plasmid pCVM44454, complete sequence	235443-235484	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP047578	Escherichia coli strain 94EC plasmid p94EC-2, complete sequence	76165-76206	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NC_019061	Escherichia coli plasmid pPWD4_103, complete sequence	41432-41473	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP016411	Salmonella enterica subsp. enterica serovar Infantis strain N55391 plasmid pN55391, complete sequence	233056-233097	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	CP052814	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S349 plasmid pN17S0349, complete sequence	239546-239587	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP019207	Salmonella enterica subsp. enterica serovar Saintpaul strain CFSAN004174 plasmid pCFSAN004174, complete sequence	29287-29328	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP028120	Escherichia coli O43 str. RM10042 plasmid pRM10042-1, complete sequence	51838-51879	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP030282	Escherichia coli strain E308 plasmid pLKSZ01, complete sequence	56556-56597	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	MN125610	Salmonella enterica subsp. enterica serovar Enteritidis strain 1.11-3A7 plasmid pIncI1-CTX-M-14, complete sequence	82981-83022	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	CP052812	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S376 plasmid pN17S0376, complete sequence	154883-154924	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	CP049876	Salmonella enterica subsp. enterica serovar Adjame strain 388789 plasmid unnamed, complete sequence	51686-51727	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	LC480203	Escherichia coli B64 plasmid pB64 DNA, complete sequence	53707-53748	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	CP052810	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S535 plasmid pN17S0535, complete sequence	103525-103566	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	CP052808	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S637 plasmid pN17S0637, complete sequence	165833-165874	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP019173	Salmonella enterica subsp. enterica serovar Saintpaul strain CFSAN004175 plasmid pCFSAN004175, complete sequence	69525-69566	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	CP052806	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S816 plasmid pN17S0816, complete sequence	46497-46538	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP047572	Escherichia coli strain 2EC1 plasmid p2EC1-1, complete sequence	71924-71965	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	MT230324	Escherichia coli strain DH5alpha plasmid pESBL71, complete sequence	42897-42938	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	CP052791	Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0552 plasmid pN17S0637, complete sequence	27533-27574	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	CP052818	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1509 plasmid pN17S1509, complete sequence	50058-50099	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP029842	Salmonella enterica subsp. enterica serovar Typhimurium strain 01ST04081 plasmid p01ST04081B, complete sequence	37856-37897	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NC_024955	Escherichia coli strain AHC4 plasmid pHNAH4-1, complete sequence	53729-53770	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP033883	Escherichia coli strain 50579417 plasmid p50579417_2, complete sequence	65142-65183	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	CP052260	Klebsiella pneumoniae strain E16KP0290 plasmid pE16KP0290-2, complete sequence	41811-41852	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	MN124285	Escherichia coli strain RKI3099 plasmid pRKI3099a, complete sequence	55022-55063	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP053081	Escherichia coli strain HB37 plasmid pHB37-1, complete sequence	47673-47714	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	CP052799	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S990 plasmid pN17S0990-1, complete sequence	176185-176226	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_MH257955	Escherichia coli strain 104 plasmid pHXH-3, complete sequence	53641-53682	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_MG764547	Escherichia coli strain 14E509 plasmid p14E509-CTXM, complete sequence	56521-56562	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_MN702386	Escherichia coli strain LWY24J plasmid pLWY24J-4, complete sequence	33728-33769	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_MF344577	Klebsiella pneumoniae strain N201205880 plasmid p205880-NR2, complete sequence	27935-27976	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_MG825377	Escherichia coli strain 1108 plasmid p1108-emrB, complete sequence	41863-41904	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_MG545910	Escherichia coli strain EC014 plasmid pEC014, complete sequence	63882-63923	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP016568	Salmonella enterica subsp. enterica serovar Heidelberg strain AMR588-04-00318 plasmid pAMR588-04-00318_99, complete sequence	41777-41818	3	0.929
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_KT754167	Shigella dysenteriae 1 strain 69-3818 plasmid p69-3818, complete sequence	106608-106649	4	0.905
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP026770	Shigella flexneri Y strain 93-3063 plasmid unnamed2	1878-1919	4	0.905
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NC_032099	Shigella dysenteriae 1 strain 92-9000 plasmid p92-9000, complete sequence	22160-22201	4	0.905
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP026778	Shigella dysenteriae strain 69-3818 plasmid unnamed1	2898-2939	4	0.905
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_CP054354	Escherichia coli strain SCU-172 plasmid pSCU-172-1, complete sequence	25063-25104	4	0.905
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_MK758104	Escherichia coli strain 0126:B16 plasmid R16, complete sequence	50428-50469	4	0.905
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_MK088173	Salmonella enterica subsp. enterica strain H-185 plasmid R805a, complete sequence	27411-27452	4	0.905
NZ_CP046284_1	1.1\|16386\|42\|NZ_CP046284\|CRISPRCasFinder	16386-16427	42	NZ_MF344575	Escherichia coli strain 140611011 plasmid p11011-CTXM, complete sequence	76808-76849	4	0.905

1. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP038793 (Escherichia coli strain PF9285 plasmid pDW54_2, complete sequence) position: , mismatch: 0, identity: 1.0

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcatcataatcaccaaatcaacgcgaaaaataagcg	Protospacer
******************************************

2. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP046284 (Salmonella enterica strain FDAARGOS_687 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcatcataatcaccaaatcaacgcgaaaaataagcg	Protospacer
******************************************

3. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to CP042951 (Escherichia coli strain D8-1 plasmid pD8-1_2, complete sequence) position: , mismatch: 0, identity: 1.0

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcatcataatcaccaaatcaacgcgaaaaataagcg	Protospacer
******************************************

4. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP053733 (Escherichia coli strain CP55_Sichuan plasmid pCP55-141k, complete sequence) position: , mismatch: 0, identity: 1.0

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcatcataatcaccaaatcaacgcgaaaaataagcg	Protospacer
******************************************

5. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP014199 (Escherichia coli strain MRE600 plasmid pMRE600-1, complete sequence) position: , mismatch: 0, identity: 1.0

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcatcataatcaccaaatcaacgcgaaaaataagcg	Protospacer
******************************************

6. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NC_009788 (Escherichia coli O139:H28 str. E24377A plasmid pETEC_73, complete sequence) position: , mismatch: 0, identity: 1.0

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcatcataatcaccaaatcaacgcgaaaaataagcg	Protospacer
******************************************

7. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to CP053754 (Shigella sonnei strain 506 plasmid pMHMC-003, complete sequence) position: , mismatch: 0, identity: 1.0

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcatcataatcaccaaatcaacgcgaaaaataagcg	Protospacer
******************************************

8. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_LT985300 (Escherichia coli strain ECOR 24 genome assembly, plasmid: RCS90_pI) position: , mismatch: 0, identity: 1.0

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcatcataatcaccaaatcaacgcgaaaaataagcg	Protospacer
******************************************

9. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP051713 (Escherichia coli strain SCU-123 plasmid pSCU-123-2, complete sequence) position: , mismatch: 0, identity: 1.0

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcatcataatcaccaaatcaacgcgaaaaataagcg	Protospacer
******************************************

10. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NC_025145 (Escherichia coli plasmid pL2-87, complete sequence) position: , mismatch: 0, identity: 1.0

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcatcataatcaccaaatcaacgcgaaaaataagcg	Protospacer
******************************************

11. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP024254 (Escherichia coli strain ATCC 43886 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcatcataatcaccaaatcaacgcgaaaaataagcg	Protospacer
******************************************

12. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP015141 (Escherichia coli strain Ecol_732 plasmid pEC732_3, complete sequence) position: , mismatch: 0, identity: 1.0

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcatcataatcaccaaatcaacgcgaaaaataagcg	Protospacer
******************************************

13. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to CP054380 (Escherichia coli strain SCU-175 plasmid pSCU-175-1, complete sequence) position: , mismatch: 0, identity: 1.0

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcatcataatcaccaaatcaacgcgaaaaataagcg	Protospacer
******************************************

14. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP022673 (Shigella sonnei strain 866 plasmid p866, complete sequence) position: , mismatch: 0, identity: 1.0

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcatcataatcaccaaatcaacgcgaaaaataagcg	Protospacer
******************************************

15. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_MK396099 (Escherichia coli strain Ec20-Lar plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcatcataatcaccaaatcaacgcgaaaaataagcg	Protospacer
******************************************

16. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_MK455767 (Escherichia coli strain Ec-2Lar plasmid pB-Ec2, complete sequence) position: , mismatch: 0, identity: 1.0

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcatcataatcaccaaatcaacgcgaaaaataagcg	Protospacer
******************************************

17. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP023350 (Escherichia coli strain ETEC-2264 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.976

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcatcataatcaccaaatcaacgcgataaataagcg	Protospacer
******************************** *********

18. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to CP035009 (Shigella sonnei strain LC1477/18 plasmid pLC1477_18-1, complete sequence) position: , mismatch: 2, identity: 0.952

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcatcataatcaccaaatcagcgcgaaaaataagtg	Protospacer
**************************.*************.*

19. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP025846 (Escherichia coli strain 720632 plasmid p720632_86, complete sequence) position: , mismatch: 2, identity: 0.952

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcatcataatcaccaaatcaacgcgataaataagtg	Protospacer
******************************** *******.*

20. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP018638 (Salmonella enterica subsp. enterica serovar Enteritidis strain 69-3861 plasmid pSE69-3861-1, complete sequence) position: , mismatch: 2, identity: 0.952

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcatcataatcaccaaatcagcgcgaaaaataagtg	Protospacer
**************************.*************.*

21. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP012835 (Salmonella enterica subsp. enterica serovar Cerro str. CFSAN001588 plasmid pCFSAN001588_002, complete sequence) position: , mismatch: 2, identity: 0.952

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcatcataatcaccaaatcaacgcgataaataagtg	Protospacer
******************************** *******.*

22. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP014096 (Shigella sonnei strain FDAARGOS_90 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.952

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcatcataatcaccaaatcaacgcgataaataagtg	Protospacer
******************************** *******.*

23. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_LT985283 (Escherichia coli strain 13942-1 genome assembly, plasmid: RCS74_pI) position: , mismatch: 2, identity: 0.952

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcatcataatcaccaaatcaacgcgataaataagtg	Protospacer
******************************** *******.*

24. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP051720 (Escherichia coli strain SCU-116 plasmid pSCU-116-1, complete sequence) position: , mismatch: 2, identity: 0.952

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcatcataatcaccaaatcagcgcgaaaaataagtg	Protospacer
**************************.*************.*

25. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP030191 (Salmonella enterica strain SA20104250 plasmid pSA20104250.1, complete sequence) position: , mismatch: 2, identity: 0.952

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcatcataatcaccaaatcaacgcgataaataagtg	Protospacer
******************************** *******.*

26. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP024150 (Escherichia coli strain 14EC033 plasmid p14EC033c, complete sequence) position: , mismatch: 2, identity: 0.952

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcatcataatcaccaaatcagcgcgaaaaataagtg	Protospacer
**************************.*************.*

27. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP042248 (Escherichia coli strain BCE049 plasmid pBCE049-2, complete sequence) position: , mismatch: 2, identity: 0.952

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcatcataatcaccaaatcagcgcgaaaaataagtg	Protospacer
**************************.*************.*

28. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP015916 (Escherichia coli strain 210205630 isolate 210205630 plasmid pSLy4, complete sequence) position: , mismatch: 2, identity: 0.952

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcatcataatcaccaaatcaacgcgataaataagtg	Protospacer
******************************** *******.*

29. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP031111 (Escherichia coli strain AMSCJX02 plasmid pAMSC6, complete sequence) position: , mismatch: 2, identity: 0.952

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcatcataatcaccaaatcaacgcgataaataagtg	Protospacer
******************************** *******.*

30. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP027135 (Escherichia coli strain AR_0369 plasmid unnamed3) position: , mismatch: 2, identity: 0.952

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcatcataatcaccaaatcaacgcgataaataagtg	Protospacer
******************************** *******.*

31. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to CP049613 (Escherichia coli O157:H7 strain K1516 plasmid pK1516-1) position: , mismatch: 2, identity: 0.952

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcatcataatcaccaaatcaacgcgataaataagtg	Protospacer
******************************** *******.*

32. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_MH287044 (Escherichia coli strain 5.1-R1 plasmid pCERC6, complete sequence) position: , mismatch: 2, identity: 0.952

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcatcataatcaccaaatcaacgcgataaataagtg	Protospacer
******************************** *******.*

33. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_MF344576 (Escherichia coli strain 15061806 plasmid p61806-CTXM, complete sequence) position: , mismatch: 2, identity: 0.952

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcatcataatcaccaaatcaacgcgataaataagtg	Protospacer
******************************** *******.*

34. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_MG299151 (Shigella sonnei strain SH287-2 plasmid pSH287-2, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

35. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_KY471628 (Shigella sonnei strain SH15sh99 plasmid pSH15sh99, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

36. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_MG299131 (Shigella sonnei strain SH271-2 plasmid pSH271-2, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

37. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_KY471629 (Shigella sonnei strain SH15sh105 plasmid pSH15sh104, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

38. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_MG299133 (Shigella sonnei strain SH272-2 plasmid pSH272-2, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

39. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_KX246268 (Escherichia coli strain RD174 plasmid pHNRD174, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

40. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP025625 (Escherichia coli strain SCEC020007 plasmid pBOKZ_020007, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

41. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_MG299128 (Shigella sonnei strain SH262-2 plasmid pSH262-2, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

42. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_MG299147 (Shigella sonnei strain SH284-2 plasmid pSH284-2, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

43. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_KT282968 (Escherichia coli strain EC012 plasmid pEC012, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

44. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP025455 (Salmonella enterica subsp. enterica serovar Agona strain USDA-ARS-USMARC-76334 plasmid pSAG-76334, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

45. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to CP052795 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0125 plasmid pN19S0125, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

46. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_KP987217 (Klebsiella pneumoniae strain 628 plasmid p628-CTXM, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

47. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_KM409652 (Escherichia coli strain REL5382 plasmid pB15, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

48. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_KM085449 (Escherichia coli O104:H7 strain RM9387 plasmid pO104_H7, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcatcataatcaccaaatcagcgcgataaataagtg	Protospacer
**************************.***** *******.*

49. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_KP198616 (Escherichia coli strain C0996A plasmid pCTXM123_C0996, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcatcataatcaccaaatcagcgcgataaataagtg	Protospacer
**************************.***** *******.*

50. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_KJ866866 (Escherichia coli strain SKLX3330 plasmid pSKLX3330, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

51. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP015246 (Escherichia coli O91 str. RM7190 plasmid pRM7190-2, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcatcataatcaccaaatcagcgcgataaataagtg	Protospacer
**************************.***** *******.*

52. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP045742 (Escherichia coli strain DH5alpha plasmid pTHNK130-1, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcatcataatcaccaaatcagcgcgataaataagtg	Protospacer
**************************.***** *******.*

53. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP028485 (Escherichia coli strain E41-1 plasmid p2, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

54. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP010142 (Escherichia coli strain D3 plasmid B, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

55. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP031907 (Escherichia coli O91:H21 strain FWSEC0008 plasmid unnamed17, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcatcataatcaccaaatcagcgcgataaataagtg	Protospacer
**************************.***** *******.*

56. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to CP052804 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S973 plasmid pN17S0973, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

57. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to CP038508 (Salmonella enterica subsp. enterica serovar Infantis strain FARPER-219 plasmid p-F219, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

58. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to CP052802 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S976 plasmid pN17S0976, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

59. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to CP042949 (Escherichia coli strain ATCC 51435 plasmid pB2F1, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcatcataatcaccaaatcagcgcgataaataagtg	Protospacer
**************************.***** *******.*

60. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP009105 (Escherichia coli strain RM9387 plasmid pO104_H7, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcatcataatcaccaaatcagcgcgataaataagtg	Protospacer
**************************.***** *******.*

61. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to CP052788 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0611 plasmid pN19S0611, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

62. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to CP052840 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S024 plasmid pN16S024, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

63. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP039714 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014853 plasmid p09-3649.1, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcatcataatcaccaaatcagcgcgataaataagtg	Protospacer
**************************.***** *******.*

64. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to CP052786 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0641 plasmid pN19S0641, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

65. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to CP052838 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S097 plasmid pN16S097, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

66. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to CP051676 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1234 plasmid pN16S1234, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

67. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to CP052783 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0679 plasmid pN19S0679-1, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

68. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to CP052836 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S103 plasmid pN16S103, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

69. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NC_023329 (Escherichia coli strain B3804 plasmid pIFM3804, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcatcataatcaccaaatcagcgcgataaataagtg	Protospacer
**************************.***** *******.*

70. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP009052 (Escherichia coli NCCP15648 plasmid p15648-2, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

71. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP016572 (Salmonella enterica subsp. enterica serovar Heidelberg strain AMR588-04-00320 plasmid pAMR588-04-00320_99, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

72. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP041959 (Escherichia coli strain EC2 plasmid pEC2_4, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

73. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP015161 (Escherichia coli strain Eco889 plasmid pECO-93a, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

74. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to MH579767 (Salmonella enterica subsp. enterica serovar Typhi strain SAL-18-0989 isolate B plasmid pSTY-blaCTX-M-65, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

75. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to CP052781 (Salmonella enterica strain CVM N19S0949 plasmid pN19S0949, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

76. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to CP052834 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S041 plasmid pN17S0041, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

77. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to CP045527 (Shigella sonnei strain 6607.69 plasmid p6607-69, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

78. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP032264 (Escherichia coli strain AR_0089 plasmid unnamed2, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

79. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to CP052793 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0388 plasmid pN19S0388, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

80. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to CP052779 (Salmonella enterica strain 19TN07GT06K-S plasmid pN19S1233, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

81. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to CP052832 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1040 plasmid pN17S1040, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

82. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP016387 (Salmonella enterica subsp. enterica serovar Typhimurium strain 13-931 plasmid p931IncI1, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcatcataatcaccaaatcagcgcgataaataagtg	Protospacer
**************************.***** *******.*

83. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP018993 (Escherichia coli strain Ecol_AZ147 plasmid pECAZ147_2, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

84. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP034821 (Salmonella sp. SSDFZ54 plasmid pTB502, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcatcataatcaccaaatcagcgcgataaataagtg	Protospacer
**************************.***** *******.*

85. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to CP052830 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1105 plasmid pN17S1105, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

86. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NC_012487 (Escherichia coli plasmid pO26-Vir, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

87. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP050747 (Salmonella enterica subsp. enterica serovar Typhimurium strain ST53 plasmid pST53-2, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

88. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to CP052828 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1126 plasmid pN17S1126, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

89. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to LN735558 (Escherichia coli plasmid pC193, complete sequence, strain C193) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

90. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to LN735559 (Escherichia coli plasmid pM105, complete sequence, strain M105) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

91. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to LN735560 (Escherichia coli plasmid pV408, complete sequence, strain V408) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

92. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to LN735561 (Escherichia coli plasmid pC271, complete sequence, strain C271) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

93. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP021208 (Escherichia coli strain strain Z247 plasmid p2474-3, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

94. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP019205 (Salmonella enterica subsp. enterica serovar Saintpaul strain CFSAN004173 plasmid pCFSAN004173, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcatcataatcaccaaatcagcgcgataaataagtg	Protospacer
**************************.***** *******.*

95. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_LT985321 (Escherichia coli strain ECOR 3 genome assembly, plasmid: RCS85_pI) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcatcataatcaccaaatcagcgcgataaataagtg	Protospacer
**************************.***** *******.*

96. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to CP052826 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1245 plasmid pN17S0637, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

97. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP051702 (Escherichia coli strain SCU-125 plasmid pSCU-125-2, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

98. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP005999 (Escherichia coli B7A plasmid pEB1, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

99. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP040808 (Escherichia fergusonii strain EFCF056 plasmid pEF03, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

100. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP024822 (Escherichia coli strain CREC-591 plasmid pCREC-591_1, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcatcataatcaccaaatcagcgcgataaataagtg	Protospacer
**************************.***** *******.*

101. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP024481 (Escherichia coli strain 2011C-4315 plasmid unnamed2, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcatcataatcaccaaatcagcgcgataaataagtg	Protospacer
**************************.***** *******.*

102. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP036181 (Escherichia coli strain WCHEC025970 plasmid p2_025970, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcatcataatcaccaaatcagcgcgataaataagtg	Protospacer
**************************.***** *******.*

103. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to CP010831 (Shigella sonnei strain FORC_011 plasmid pFORC11.2, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

104. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP016409 (Salmonella enterica subsp. enterica serovar Infantis strain FSIS1502916 plasmid pFSIS1502916, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

105. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP051745 (Escherichia coli strain SCU-484 plasmid pSCU-484-1, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

106. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to CP052824 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1265 plasmid pN17S1265, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

107. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to CP052822 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1349 plasmid pN17S1349, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

108. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to CP054459 (Escherichia coli strain SCU-103 plasmid pSCU-103-2) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

109. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP016516 (Salmonella enterica subsp. enterica serovar Heidelberg strain 11-004736-1-7 plasmid p11-004736-1-7_99, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

110. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP016407 (Salmonella enterica subsp. enterica serovar Infantis strain FSIS1502169 plasmid pFSIS1502169, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

111. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to CP052820 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1442 plasmid pN17S1442, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

112. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP014972 (Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1898 isolate ST073 plasmid pSTY1-1898, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

113. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP016413 (Salmonella enterica subsp. enterica serovar Infantis strain CVM44454 plasmid pCVM44454, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

114. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP047578 (Escherichia coli strain 94EC plasmid p94EC-2, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

115. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NC_019061 (Escherichia coli plasmid pPWD4_103, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

116. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP016411 (Salmonella enterica subsp. enterica serovar Infantis strain N55391 plasmid pN55391, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

117. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to CP052814 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S349 plasmid pN17S0349, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

118. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP019207 (Salmonella enterica subsp. enterica serovar Saintpaul strain CFSAN004174 plasmid pCFSAN004174, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcatcataatcaccaaatcagcgcgataaataagtg	Protospacer
**************************.***** *******.*

119. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP028120 (Escherichia coli O43 str. RM10042 plasmid pRM10042-1, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcatcataatcaccaaatcagcgcgataaataagtg	Protospacer
**************************.***** *******.*

120. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP030282 (Escherichia coli strain E308 plasmid pLKSZ01, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcatcataatcaccaaatcagcgcgataaataagtg	Protospacer
**************************.***** *******.*

121. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to MN125610 (Salmonella enterica subsp. enterica serovar Enteritidis strain 1.11-3A7 plasmid pIncI1-CTX-M-14, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

122. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to CP052812 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S376 plasmid pN17S0376, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

123. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to CP049876 (Salmonella enterica subsp. enterica serovar Adjame strain 388789 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

124. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to LC480203 (Escherichia coli B64 plasmid pB64 DNA, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcatcataatcaccaaatcagcgcgataaataagtg	Protospacer
**************************.***** *******.*

125. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to CP052810 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S535 plasmid pN17S0535, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

126. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to CP052808 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S637 plasmid pN17S0637, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

127. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP019173 (Salmonella enterica subsp. enterica serovar Saintpaul strain CFSAN004175 plasmid pCFSAN004175, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcatcataatcaccaaatcagcgcgataaataagtg	Protospacer
**************************.***** *******.*

128. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to CP052806 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S816 plasmid pN17S0816, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

129. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP047572 (Escherichia coli strain 2EC1 plasmid p2EC1-1, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

130. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to MT230324 (Escherichia coli strain DH5alpha plasmid pESBL71, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcatcataaccaccaaatcagcgcgaaaaataagtg	Protospacer
***************.**********.*************.*

131. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to CP052791 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0552 plasmid pN17S0637, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

132. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to CP052818 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1509 plasmid pN17S1509, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

133. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP029842 (Salmonella enterica subsp. enterica serovar Typhimurium strain 01ST04081 plasmid p01ST04081B, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcatcataatcaccaaatcagcgcgataaataagtg	Protospacer
**************************.***** *******.*

134. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NC_024955 (Escherichia coli strain AHC4 plasmid pHNAH4-1, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcatcataatcaccaaatcagcgcgataaataagtg	Protospacer
**************************.***** *******.*

135. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP033883 (Escherichia coli strain 50579417 plasmid p50579417_2, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

136. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to CP052260 (Klebsiella pneumoniae strain E16KP0290 plasmid pE16KP0290-2, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

137. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to MN124285 (Escherichia coli strain RKI3099 plasmid pRKI3099a, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcatcataatcaccaaattaacgcgataaataagtg	Protospacer
************************.******* *******.*

138. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP053081 (Escherichia coli strain HB37 plasmid pHB37-1, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcatcataatcaccaaatcagcgcgataaataagtg	Protospacer
**************************.***** *******.*

139. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to CP052799 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S990 plasmid pN17S0990-1, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

140. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_MH257955 (Escherichia coli strain 104 plasmid pHXH-3, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcatcataatcaccaaatcagcgcgataaataagtg	Protospacer
**************************.***** *******.*

141. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_MG764547 (Escherichia coli strain 14E509 plasmid p14E509-CTXM, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcatcataatcaccaaatcagcgcgataaataagtg	Protospacer
**************************.***** *******.*

142. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_MN702386 (Escherichia coli strain LWY24J plasmid pLWY24J-4, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

143. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_MF344577 (Klebsiella pneumoniae strain N201205880 plasmid p205880-NR2, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

144. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_MG825377 (Escherichia coli strain 1108 plasmid p1108-emrB, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcatcataatcaccaaatcagcgcgataaataagtg	Protospacer
**************************.***** *******.*

145. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_MG545910 (Escherichia coli strain EC014 plasmid pEC014, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

146. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP016568 (Salmonella enterica subsp. enterica serovar Heidelberg strain AMR588-04-00318 plasmid pAMR588-04-00318_99, complete sequence) position: , mismatch: 3, identity: 0.929

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataagtg	Protospacer
*********.****************.*************.*

147. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_KT754167 (Shigella dysenteriae 1 strain 69-3818 plasmid p69-3818, complete sequence) position: , mismatch: 4, identity: 0.905

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataaatg	Protospacer
*********.****************.************..*

148. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP026770 (Shigella flexneri Y strain 93-3063 plasmid unnamed2) position: , mismatch: 4, identity: 0.905

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataaatg	Protospacer
*********.****************.************..*

149. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NC_032099 (Shigella dysenteriae 1 strain 92-9000 plasmid p92-9000, complete sequence) position: , mismatch: 4, identity: 0.905

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataaatg	Protospacer
*********.****************.************..*

150. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP026778 (Shigella dysenteriae strain 69-3818 plasmid unnamed1) position: , mismatch: 4, identity: 0.905

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataaatg	Protospacer
*********.****************.************..*

151. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_CP054354 (Escherichia coli strain SCU-172 plasmid pSCU-172-1, complete sequence) position: , mismatch: 4, identity: 0.905

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataaatg	Protospacer
*********.****************.************..*

152. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_MK758104 (Escherichia coli strain 0126:B16 plasmid R16, complete sequence) position: , mismatch: 4, identity: 0.905

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataaatg	Protospacer
*********.****************.************..*

153. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_MK088173 (Salmonella enterica subsp. enterica strain H-185 plasmid R805a, complete sequence) position: , mismatch: 4, identity: 0.905

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataaatg	Protospacer
*********.****************.************..*

154. spacer 1.1|16386|42|NZ_CP046284|CRISPRCasFinder matches to NZ_MF344575 (Escherichia coli strain 140611011 plasmid p11011-CTXM, complete sequence) position: , mismatch: 4, identity: 0.905

attttatcatcataatcaccaaatcaacgcgaaaaataagcg	CRISPR spacer
attttatcaccataatcaccaaatcagcgcgaaaaataaatg	Protospacer
*********.****************.************..*

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 3994

Morganella_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000109071.1\|924_1362_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	8.3e-26	48.4
WP_019842136.1\|1358_1607_-	DinI-like family protein	Q2A098	Sodalis_phage	5.4e-14	48.0
WP_156004650.1\|2000_2927_+	DUF1281 domain-containing protein	NA	NA	NA	NA
WP_000086148.1\|3310_3994_+	DNA methylase	A0A2I7RE86	Vibrio_phage	1.1e-29	36.4

DBSCAN-SWA_2

7748 : 15835

Xanthomonas_phage(16.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001276121.1\|7748_8276_+	single-stranded DNA-binding protein	I3PGW4	Xanthomonas_phage	1.6e-47	73.5
WP_001042948.1\|8332_8566_+	DUF905 domain-containing protein	A0A096XUX0	Cronobacter_phage	1.5e-05	51.1
WP_156004654.1\|8627_10586_+	hypothetical protein	G8DH78	Emiliania_huxleyi_virus	5.4e-24	27.3
WP_156004677.1\|10640_11075_+	conjugation system SOS inhibitor PsiB	NA	NA	NA	NA
WP_001276261.1\|11071_11791_+	plasmid SOS inhibition protein A	NA	NA	NA	NA
WP_000978012.1\|11787_12384_+	hypothetical protein	A0A0N7KZV3	Escherichia_phage	3.1e-15	61.9
WP_156004655.1\|12846_13347_+	antirestriction protein ArdA	G9FHQ1	Rhodococcus_virus	7.1e-05	27.3
WP_000218863.1\|14075_14510_+	hypothetical protein	NA	NA	NA	NA
WP_156004656.1\|14601_14868_+	hypothetical protein	NA	NA	NA	NA
WP_156004657.1\|14932_15835_+\|transposase	Rpn family recombination-promoting nuclease/putative transposase	Q2A0A7	Sodalis_phage	9.0e-67	53.8

DBSCAN-SWA_3

43931 : 48339

Pseudomonas_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_156004667.1\|43931_47699_-	DNA primase	A0A1B0VML8	Pseudomonas_phage	1.0e-18	29.4
WP_000014584.1\|47787_48339_-	phospholipase D family protein	A0A1B2LRT6	Wolbachia_phage	1.5e-19	33.9

DBSCAN-SWA_4

51453 : 58411

Escherichia_phage(33.33%)

integrase

attL 43081:43095|attR 66497:66511

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
43081:43095	attL	NA	NA	NA	NA
WP_000977525.1\|51453_52038_-	histidine phosphatase family protein	A0A2L1IV13	Escherichia_phage	7.7e-11	39.8
WP_000976351.1\|52097_53300_-	conjugal transfer protein TraF	NA	NA	NA	NA
WP_022630873.1\|53385_54210_-	hypothetical protein	NA	NA	NA	NA
WP_063082698.1\|54360_55515_-\|integrase	integrase	B5WZU7	Pseudomonas_phage	1.0e-46	43.0
WP_156004681.1\|55672_55921_+	hypothetical protein	NA	NA	NA	NA
WP_096978853.1\|55917_57210_-	shufflon system plasmid conjugative transfer pilus tip adhesin PilV	NA	NA	NA	NA
WP_001401940.1\|57209_57866_-	prepilin peptidase	NA	NA	NA	NA
WP_000014005.1\|57850_58411_-	lytic transglycosylase domain-containing protein	A0A0A8J856	Ralstonia_phage	6.1e-05	33.7
66497:66511	attR	NA	NA	NA	NA

DBSCAN-SWA_5

70133 : 70397

Enterobacteria_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001324596.1\|70133_70397_-	hypothetical protein	Q7M2A7	Enterobacteria_phage	6.1e-08	54.0

DBSCAN-SWA_6

73600 : 73888

uncultured_Caudovirales_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000222775.1\|73600_73888_+	type II toxin-antitoxin system RelE/ParE family toxin	A0A2H4JBF4	uncultured_Caudovirales_phage	1.7e-19	49.5

DBSCAN-SWA_7

82856 : 86258

Macacine_betaherpesvirus(50.0%)

integrase

attL 74713:74724|attR 85996:86007

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
74713:74724	attL	NA	NA	NA	NA
WP_000016497.1\|82856_83645_+\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	4.1e-55	95.6
WP_001144036.1\|83824_84469_+	ParA family protein	NA	NA	NA	NA
WP_000030199.1\|84555_84864_+	hypothetical protein	NA	NA	NA	NA
WP_000688514.1\|85277_86258_+	recombinase	A0A0A7NPX4	Enterobacteria_phage	1.7e-79	51.4
85996:86007	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP046282

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

59969 : 69265

Escherichia_phage(28.57%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000088645.1\|59969_60650_-	DNA methylase	A0A2I7RE86	Vibrio_phage	1.6e-28	36.4
WP_000369839.1\|61031_61388_-	hypothetical protein	NA	NA	NA	NA
WP_000490265.1\|61380_61851_-	hypothetical protein	NA	NA	NA	NA
WP_000925627.1\|62361_62784_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	1.0e-28	51.6
WP_000457541.1\|62783_64058_+	Y-family DNA polymerase	F1C5A5	Cronobacter_phage	3.0e-156	64.5
WP_001541561.1\|64139_65117_-	ParB/RepB/Spo0J family partition protein	A0A1B0V750	Salmonella_phage	5.2e-84	53.2
WP_000427676.1\|65113_66319_-	ParA family protein	A0A077SL49	Escherichia_phage	1.5e-162	69.3
WP_000728917.1\|66733_67675_+\|transposase	Rpn family recombination-promoting nuclease/putative transposase	Q2A0A7	Sodalis_phage	2.0e-72	54.3
WP_001541562.1\|67706_68273_-	DUF2913 family protein	NA	NA	NA	NA
WP_001527010.1\|68329_68665_-	hypothetical protein	NA	NA	NA	NA
WP_001541564.1\|68848_69265_-	hypothetical protein	O64348	Escherichia_phage	8.2e-07	42.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP046283

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP046284

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP046282

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection