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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP046279 Salmonella enterica strain FDAARGOS_707 chromosome, complete genome 2 crisprs cas3,DinG,DEDDh,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,WYL,PD-DExK,RT 0 21 7 0

Results visualization

1. NZ_CP046279
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP046279_1 1557435-1559356 TypeI-E I-E
31 spacers
cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP046279_2 1575478-1575811 TypeI-E I-E
5 spacers
cas3,cas8e,cse2gr11,cas7

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP046279_1 1.23|1558808|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR 1558808-1558839 32 NZ_LN890526 Salmonella enterica subsp. enterica serovar Weltevreden strain 2511STDY5712385 plasmid 3, complete sequence 41461-41492 0 1.0
NZ_CP046279_1 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT 1557831-1557862 32 JN672684 Enterobacteria phage F20, partial genome 37715-37746 5 0.844
NZ_CP046279_2 2.2|1575568|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR 1575568-1575599 32 NZ_CP024424 Paracoccus yeei strain TT13 plasmid pTT13-2, complete sequence 112052-112083 5 0.844
NZ_CP046279_2 2.2|1575568|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR 1575568-1575599 32 NZ_CP020440 Paracoccus yeei strain FDAARGOS_252 plasmid unnamed2, complete sequence 224971-225002 5 0.844
NZ_CP046279_2 2.2|1575568|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR 1575568-1575599 32 NZ_CP044082 Paracoccus yeei strain FDAARGOS_643 plasmid unnamed4, complete sequence 90792-90823 5 0.844
NZ_CP046279_1 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT 1557831-1557862 32 NC_049845 Klebsiella phage PhiKpNIH-2, complete genome 5047-5078 6 0.812
NZ_CP046279_1 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT 1557831-1557862 32 MK931442 Klebsiella phage Sin4, complete genome 12746-12777 6 0.812
NZ_CP046279_1 1.38|1557832|33|NZ_CP046279|PILER-CR 1557832-1557864 33 JN672684 Enterobacteria phage F20, partial genome 37714-37746 6 0.818
NZ_CP046279_2 2.2|1575568|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR 1575568-1575599 32 NZ_CP031080 Paracoccus yeei strain CCUG 32053 plasmid pYEE2, complete sequence 271400-271431 6 0.812
NZ_CP046279_1 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT 1557831-1557862 32 MN101222 Klebsiella phage KOX9, complete genome 4022-4053 7 0.781
NZ_CP046279_1 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT 1557831-1557862 32 MN395285 Klebsiella phage PhiKpNIH-10, complete genome 47499-47530 7 0.781
NZ_CP046279_1 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT 1557831-1557862 32 KY575286 UNVERIFIED: Klebsiella phage SH-Kp 160016, complete genome 10222-10253 7 0.781
NZ_CP046279_1 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT 1557831-1557862 32 MH633486 Klebsiella phage NJS3, complete genome 12271-12302 7 0.781
NZ_CP046279_1 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT 1557831-1557862 32 MK618657 Klebsiella phage Sanco, complete genome 11812-11843 7 0.781
NZ_CP046279_1 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT 1557831-1557862 32 NC_049842 Klebsiella phage vB_KpnS_15-38_KLPPOU149, complete genome 24549-24580 7 0.781
NZ_CP046279_1 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT 1557831-1557862 32 LR757892 Klebsiella phage vB_KpnS_2811 genome assembly, chromosome: 1 16590-16621 7 0.781
NZ_CP046279_1 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT 1557831-1557862 32 MF415412 Klebsiella phage KPN N141, complete genome 24560-24591 7 0.781
NZ_CP046279_1 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT 1557831-1557862 32 MF612072 Klebsiella phage MezzoGao, complete genome 47872-47903 7 0.781
NZ_CP046279_1 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT 1557831-1557862 32 MT894005 Klebsiella phage MMBB, complete genome 14709-14740 7 0.781
NZ_CP046279_1 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT 1557831-1557862 32 MG552615 Klebsiella virus GML-KpCol1, complete genome 29536-29567 7 0.781
NZ_CP046279_1 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT 1557831-1557862 32 MK931445 Klebsiella phage Shelby, complete genome 12464-12495 7 0.781
NZ_CP046279_1 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT 1557831-1557862 32 JF501022 Klebsiella phage KP36, complete genome 13458-13489 7 0.781
NZ_CP046279_1 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT 1557831-1557862 32 KP658157 Klebsiella phage 1513, complete genome 14165-14196 7 0.781
NZ_CP046279_1 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT 1557831-1557862 32 MH445453 Klebsiella phage NJS1, complete genome 12156-12187 7 0.781
NZ_CP046279_1 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT 1557831-1557862 32 NC_028760 Klebsiella phage KLPN1, complete genome 11954-11985 7 0.781
NZ_CP046279_1 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT 1557831-1557862 32 NC_049848 Klebsiella phage KP1801, complete genome 44390-44421 7 0.781
NZ_CP046279_1 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT 1557831-1557862 32 MH633484 Klebsiella phage TAH8, complete genome 12465-12496 7 0.781
NZ_CP046279_1 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT 1557831-1557862 32 NC_048043 Klebsiella phage NJS2, complete genome 13062-13093 7 0.781
NZ_CP046279_1 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT 1557831-1557862 32 MK931443 Klebsiella phage Sweeny, complete genome 13249-13280 7 0.781
NZ_CP046279_1 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT 1557831-1557862 32 NC_049838 Klebsiella phage KL, complete genome 21132-21163 7 0.781
NZ_CP046279_1 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT 1557831-1557862 32 MH844531 Klebsiella phage GH-K3, complete genome 37090-37121 7 0.781
NZ_CP046279_1 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT 1557831-1557862 32 NC_048044 Klebsiella phage NJR15, complete genome 12303-12334 7 0.781
NZ_CP046279_1 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT 1557831-1557862 32 MG894052 Klebsiella phage JY917, complete genome 33612-33643 7 0.781
NZ_CP046279_1 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT 1557831-1557862 32 NC_048126 Klebsiella phage TSK1, complete genome 10201-10232 7 0.781
NZ_CP046279_1 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT 1557831-1557862 32 MK931444 Klebsiella phage Skenny, complete genome 12271-12302 7 0.781
NZ_CP046279_1 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT 1557831-1557862 32 NC_048143 Klebsiella phage KpKT21phi1, complete genome 23737-23768 7 0.781
NZ_CP046279_1 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT 1557831-1557862 32 NC_028774 Klebsiella phage Sushi, complete genome 4177-4208 7 0.781
NZ_CP046279_1 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT 1557831-1557862 32 NC_049840 Klebsiella phage vB_KpnS_FZ10, complete genome 12716-12747 7 0.781
NZ_CP046279_1 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT 1557831-1557862 32 NC_049844 Klebsiella phage 13, complete genome 19558-19589 7 0.781
NZ_CP046279_1 1.15|1558319|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR 1558319-1558350 32 NZ_CP054841 Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence 173164-173195 7 0.781
NZ_CP046279_1 1.17|1558441|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR 1558441-1558472 32 NZ_CP043441 Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence 1096435-1096466 7 0.781
NZ_CP046279_1 1.26|1558991|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR 1558991-1559022 32 KJ803031 Dinoroseobacter phage vBDshPR2C, complete genome 12107-12138 7 0.781
NZ_CP046279_1 1.27|1559052|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR 1559052-1559083 32 MK416008 Klebsiella phage ST405-OXA48phi1.3, complete genome 8038-8069 7 0.781
NZ_CP046279_1 1.29|1559174|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR 1559174-1559205 32 MK448714 Streptococcus phage Javan241, complete genome 7328-7359 7 0.781
NZ_CP046279_1 1.38|1557832|33|NZ_CP046279|PILER-CR 1557832-1557864 33 NC_049845 Klebsiella phage PhiKpNIH-2, complete genome 5046-5078 7 0.788
NZ_CP046279_1 1.38|1557832|33|NZ_CP046279|PILER-CR 1557832-1557864 33 MK931442 Klebsiella phage Sin4, complete genome 12746-12778 7 0.788
NZ_CP046279_2 2.2|1575568|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR 1575568-1575599 32 NC_009621 Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence 654402-654433 7 0.781
NZ_CP046279_2 2.5|1575751|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR 1575751-1575782 32 AJ344259 Sulfolobus virus SIRV-2 genomic DNA 29744-29775 7 0.781
NZ_CP046279_1 1.13|1558197|32|NZ_CP046279|CRISPRCasFinder,CRT 1558197-1558228 32 NZ_CP032323 Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence 535727-535758 8 0.75
NZ_CP046279_1 1.15|1558319|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR 1558319-1558350 32 KM659097 Paracoccus yeei plasmid pLM20P5, complete sequence 11561-11592 8 0.75
NZ_CP046279_1 1.15|1558319|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR 1558319-1558350 32 MH834622 Arthrobacter phage Noely, complete genome 3314-3345 8 0.75
NZ_CP046279_1 1.20|1558625|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR 1558625-1558656 32 NZ_CP010615 Phaeobacter inhibens strain P92 plasmid pP92_e, complete sequence 20313-20344 8 0.75
NZ_CP046279_1 1.20|1558625|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR 1558625-1558656 32 NZ_CP010634 Phaeobacter inhibens strain P78 plasmid pP78_e, complete sequence 20313-20344 8 0.75
NZ_CP046279_1 1.20|1558625|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR 1558625-1558656 32 NZ_CP010606 Phaeobacter inhibens strain P83 plasmid pP83_g, complete sequence 20321-20352 8 0.75
NZ_CP046279_1 1.20|1558625|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR 1558625-1558656 32 NZ_CP010774 Phaeobacter piscinae strain P13 plasmid pP13_g, complete sequence 20321-20352 8 0.75
NZ_CP046279_1 1.20|1558625|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR 1558625-1558656 32 NZ_CP010712 Phaeobacter inhibens strain P66 plasmid pP66_g, complete sequence 20337-20368 8 0.75
NZ_CP046279_1 1.31|1559296|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR 1559296-1559327 32 NZ_AP018257 Calothrix sp. NIES-4071 plasmid plasmid2 DNA, complete genome 195507-195538 8 0.75
NZ_CP046279_1 1.38|1557832|33|NZ_CP046279|PILER-CR 1557832-1557864 33 KY575286 UNVERIFIED: Klebsiella phage SH-Kp 160016, complete genome 10221-10253 8 0.758
NZ_CP046279_1 1.38|1557832|33|NZ_CP046279|PILER-CR 1557832-1557864 33 MT894005 Klebsiella phage MMBB, complete genome 14708-14740 8 0.758
NZ_CP046279_1 1.38|1557832|33|NZ_CP046279|PILER-CR 1557832-1557864 33 MG552615 Klebsiella virus GML-KpCol1, complete genome 29535-29567 8 0.758
NZ_CP046279_1 1.38|1557832|33|NZ_CP046279|PILER-CR 1557832-1557864 33 KP658157 Klebsiella phage 1513, complete genome 14164-14196 8 0.758
NZ_CP046279_1 1.38|1557832|33|NZ_CP046279|PILER-CR 1557832-1557864 33 NC_049848 Klebsiella phage KP1801, complete genome 44389-44421 8 0.758
NZ_CP046279_1 1.38|1557832|33|NZ_CP046279|PILER-CR 1557832-1557864 33 MH844531 Klebsiella phage GH-K3, complete genome 37089-37121 8 0.758
NZ_CP046279_1 1.38|1557832|33|NZ_CP046279|PILER-CR 1557832-1557864 33 MG894052 Klebsiella phage JY917, complete genome 33611-33643 8 0.758
NZ_CP046279_1 1.38|1557832|33|NZ_CP046279|PILER-CR 1557832-1557864 33 NC_048143 Klebsiella phage KpKT21phi1, complete genome 23736-23768 8 0.758
NZ_CP046279_1 1.38|1557832|33|NZ_CP046279|PILER-CR 1557832-1557864 33 NC_049844 Klebsiella phage 13, complete genome 19557-19589 8 0.758
NZ_CP046279_1 1.38|1557832|33|NZ_CP046279|PILER-CR 1557832-1557864 33 MN395285 Klebsiella phage PhiKpNIH-10, complete genome 47499-47531 8 0.758
NZ_CP046279_1 1.38|1557832|33|NZ_CP046279|PILER-CR 1557832-1557864 33 MH633486 Klebsiella phage NJS3, complete genome 12271-12303 8 0.758
NZ_CP046279_1 1.38|1557832|33|NZ_CP046279|PILER-CR 1557832-1557864 33 MK618657 Klebsiella phage Sanco, complete genome 11812-11844 8 0.758
NZ_CP046279_1 1.38|1557832|33|NZ_CP046279|PILER-CR 1557832-1557864 33 NC_049842 Klebsiella phage vB_KpnS_15-38_KLPPOU149, complete genome 24549-24581 8 0.758
NZ_CP046279_1 1.38|1557832|33|NZ_CP046279|PILER-CR 1557832-1557864 33 LR757892 Klebsiella phage vB_KpnS_2811 genome assembly, chromosome: 1 16590-16622 8 0.758
NZ_CP046279_1 1.38|1557832|33|NZ_CP046279|PILER-CR 1557832-1557864 33 MF415412 Klebsiella phage KPN N141, complete genome 24560-24592 8 0.758
NZ_CP046279_1 1.38|1557832|33|NZ_CP046279|PILER-CR 1557832-1557864 33 MF612072 Klebsiella phage MezzoGao, complete genome 47872-47904 8 0.758
NZ_CP046279_1 1.38|1557832|33|NZ_CP046279|PILER-CR 1557832-1557864 33 MK931445 Klebsiella phage Shelby, complete genome 12464-12496 8 0.758
NZ_CP046279_1 1.38|1557832|33|NZ_CP046279|PILER-CR 1557832-1557864 33 JF501022 Klebsiella phage KP36, complete genome 13458-13490 8 0.758
NZ_CP046279_1 1.38|1557832|33|NZ_CP046279|PILER-CR 1557832-1557864 33 MH445453 Klebsiella phage NJS1, complete genome 12156-12188 8 0.758
NZ_CP046279_1 1.38|1557832|33|NZ_CP046279|PILER-CR 1557832-1557864 33 NC_028760 Klebsiella phage KLPN1, complete genome 11954-11986 8 0.758
NZ_CP046279_1 1.38|1557832|33|NZ_CP046279|PILER-CR 1557832-1557864 33 MH633484 Klebsiella phage TAH8, complete genome 12465-12497 8 0.758
NZ_CP046279_1 1.38|1557832|33|NZ_CP046279|PILER-CR 1557832-1557864 33 NC_048043 Klebsiella phage NJS2, complete genome 13062-13094 8 0.758
NZ_CP046279_1 1.38|1557832|33|NZ_CP046279|PILER-CR 1557832-1557864 33 MK931443 Klebsiella phage Sweeny, complete genome 13249-13281 8 0.758
NZ_CP046279_1 1.38|1557832|33|NZ_CP046279|PILER-CR 1557832-1557864 33 NC_049838 Klebsiella phage KL, complete genome 21132-21164 8 0.758
NZ_CP046279_1 1.38|1557832|33|NZ_CP046279|PILER-CR 1557832-1557864 33 NC_048044 Klebsiella phage NJR15, complete genome 12303-12335 8 0.758
NZ_CP046279_1 1.38|1557832|33|NZ_CP046279|PILER-CR 1557832-1557864 33 NC_048126 Klebsiella phage TSK1, complete genome 10201-10233 8 0.758
NZ_CP046279_1 1.38|1557832|33|NZ_CP046279|PILER-CR 1557832-1557864 33 MK931444 Klebsiella phage Skenny, complete genome 12271-12303 8 0.758
NZ_CP046279_1 1.38|1557832|33|NZ_CP046279|PILER-CR 1557832-1557864 33 NC_028774 Klebsiella phage Sushi, complete genome 4177-4209 8 0.758
NZ_CP046279_1 1.38|1557832|33|NZ_CP046279|PILER-CR 1557832-1557864 33 NC_049840 Klebsiella phage vB_KpnS_FZ10, complete genome 12716-12748 8 0.758
NZ_CP046279_2 2.2|1575568|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR 1575568-1575599 32 NZ_CP029452 Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence 2052295-2052326 8 0.75
NZ_CP046279_2 2.2|1575568|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR 1575568-1575599 32 NC_008826 Methylibium petroleiphilum PM1 plasmid RPME01, complete sequence 343727-343758 8 0.75
NZ_CP046279_2 2.5|1575751|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR 1575751-1575782 32 GU943054 Uncultured phage MedDCM-OCT-S04-C24 genomic sequence 15155-15186 8 0.75
NZ_CP046279_2 2.5|1575751|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR 1575751-1575782 32 MN693497 Marine virus AFVG_25M179, complete genome 38164-38195 8 0.75
NZ_CP046279_1 1.4|1557647|32|NZ_CP046279|CRISPRCasFinder,CRT 1557647-1557678 32 NZ_CP012748 Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence 2054717-2054748 9 0.719
NZ_CP046279_1 1.6|1557770|32|NZ_CP046279|CRISPRCasFinder,CRT 1557770-1557801 32 AP018319 Nostoc sp. HK-01 plasmid plasmid1 DNA, complete genome 224616-224647 9 0.719
NZ_CP046279_1 1.12|1558136|32|NZ_CP046279|CRISPRCasFinder,CRT 1558136-1558167 32 AP013386 Uncultured Mediterranean phage uvMED DNA, complete genome, group G15, isolate: uvMED-CGR-C23-MedDCM-OCT-S37-C51 33360-33391 9 0.719
NZ_CP046279_1 1.12|1558136|32|NZ_CP046279|CRISPRCasFinder,CRT 1558136-1558167 32 GU943014 Uncultured phage MedDCM-OCT-S04-C1161 genomic sequence 17166-17197 9 0.719
NZ_CP046279_1 1.12|1558136|32|NZ_CP046279|CRISPRCasFinder,CRT 1558136-1558167 32 AP014420 Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C24-MedDCM-OCT-S43-C167, *** SEQUENCING IN PROGRESS ***, 5 ordered pieces 1557-1588 9 0.719
NZ_CP046279_1 1.12|1558136|32|NZ_CP046279|CRISPRCasFinder,CRT 1558136-1558167 32 GU943017 Uncultured phage MedDCM-OCT-S04-C1227 genomic sequence 8838-8869 9 0.719
NZ_CP046279_1 1.12|1558136|32|NZ_CP046279|CRISPRCasFinder,CRT 1558136-1558167 32 AP014417 Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C24-MedDCM-OCT-S39-C59, *** SEQUENCING IN PROGRESS ***, 5 ordered pieces 32062-32093 9 0.719
NZ_CP046279_1 1.12|1558136|32|NZ_CP046279|CRISPRCasFinder,CRT 1558136-1558167 32 GU943022 Uncultured phage MedDCM-OCT-S04-C890 genomic sequence 8801-8832 9 0.719
NZ_CP046279_1 1.12|1558136|32|NZ_CP046279|CRISPRCasFinder,CRT 1558136-1558167 32 GU943013 Uncultured phage MedDCM-OCT-S04-C1035 genomic sequence 10849-10880 9 0.719
NZ_CP046279_1 1.12|1558136|32|NZ_CP046279|CRISPRCasFinder,CRT 1558136-1558167 32 AP014416 Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C24-MedDCM-OCT-S27-C110, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces 9243-9274 9 0.719
NZ_CP046279_1 1.14|1558258|32|NZ_CP046279|CRISPRCasFinder,CRT 1558258-1558289 32 NZ_CP016617 Microvirga ossetica strain V5/3m plasmid unnamed1, complete sequence 670891-670922 9 0.719
NZ_CP046279_1 1.15|1558319|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR 1558319-1558350 32 MF919512 Mycobacterium phage Klein, complete genome 101112-101143 9 0.719
NZ_CP046279_1 1.22|1558747|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR 1558747-1558778 32 NZ_CP049117 Pantoea stewartii strain ZJ-FGZX1 plasmid unnamed2, complete sequence 40403-40434 9 0.719
NZ_CP046279_1 1.22|1558747|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR 1558747-1558778 32 NZ_CP035035 Pantoea ananatis strain NN08200 plasmid unnamed1, complete sequence 6373-6404 9 0.719
NZ_CP046279_1 1.27|1559052|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR 1559052-1559083 32 MG893203 Vibrio phage VP06, complete genome 26226-26257 9 0.719
NZ_CP046279_1 1.29|1559174|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR 1559174-1559205 32 NZ_CP039706 Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence 502920-502951 9 0.719
NZ_CP046279_1 1.1|1557464|32|NZ_CP046279|CRISPRCasFinder,CRT 1557464-1557495 32 NZ_CP015322 Mesorhizobium amorphae CCNWGS0123 plasmid pM0123d, complete sequence 189469-189500 10 0.688
NZ_CP046279_1 1.1|1557464|32|NZ_CP046279|CRISPRCasFinder,CRT 1557464-1557495 32 NZ_CP017104 Rhizobium gallicum strain IE4872 plasmid pRgalIE4872c, complete sequence 62349-62380 10 0.688
NZ_CP046279_1 1.1|1557464|32|NZ_CP046279|CRISPRCasFinder,CRT 1557464-1557495 32 CP006879 Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602b, complete sequence 65153-65184 10 0.688
NZ_CP046279_1 1.15|1558319|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR 1558319-1558350 32 NZ_CP040821 Paraoceanicella profunda strain D4M1 plasmid pD4M1C, complete sequence 111697-111728 10 0.688
NZ_CP046279_1 1.15|1558319|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR 1558319-1558350 32 MN908686 Microbacterium phage Zepp, complete genome 30030-30061 10 0.688
NZ_CP046279_1 1.15|1558319|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR 1558319-1558350 32 MT889377 Microbacterium phage Zayuliv, complete genome 30596-30627 10 0.688
NZ_CP046279_1 1.19|1558564|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR 1558564-1558595 32 NC_014309 Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome 786976-787007 10 0.688
NZ_CP046279_1 1.29|1559174|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR 1559174-1559205 32 NC_018493 Bacillus cereus FRI-35 plasmid p02, complete sequence 11521-11552 10 0.688
NZ_CP046279_1 1.31|1559296|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR 1559296-1559327 32 NZ_CP045273 Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence 513301-513332 10 0.688
NZ_CP046279_1 1.43|1558137|33|NZ_CP046279|PILER-CR 1558137-1558169 33 AP013386 Uncultured Mediterranean phage uvMED DNA, complete genome, group G15, isolate: uvMED-CGR-C23-MedDCM-OCT-S37-C51 33360-33392 10 0.697
NZ_CP046279_1 1.43|1558137|33|NZ_CP046279|PILER-CR 1558137-1558169 33 GU943014 Uncultured phage MedDCM-OCT-S04-C1161 genomic sequence 17166-17198 10 0.697
NZ_CP046279_1 1.43|1558137|33|NZ_CP046279|PILER-CR 1558137-1558169 33 AP014420 Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C24-MedDCM-OCT-S43-C167, *** SEQUENCING IN PROGRESS ***, 5 ordered pieces 1556-1588 10 0.697
NZ_CP046279_1 1.43|1558137|33|NZ_CP046279|PILER-CR 1558137-1558169 33 GU943017 Uncultured phage MedDCM-OCT-S04-C1227 genomic sequence 8837-8869 10 0.697
NZ_CP046279_1 1.43|1558137|33|NZ_CP046279|PILER-CR 1558137-1558169 33 AP014417 Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C24-MedDCM-OCT-S39-C59, *** SEQUENCING IN PROGRESS ***, 5 ordered pieces 32062-32094 10 0.697
NZ_CP046279_1 1.43|1558137|33|NZ_CP046279|PILER-CR 1558137-1558169 33 GU943022 Uncultured phage MedDCM-OCT-S04-C890 genomic sequence 8800-8832 10 0.697
NZ_CP046279_1 1.43|1558137|33|NZ_CP046279|PILER-CR 1558137-1558169 33 GU943013 Uncultured phage MedDCM-OCT-S04-C1035 genomic sequence 10849-10881 10 0.697
NZ_CP046279_1 1.43|1558137|33|NZ_CP046279|PILER-CR 1558137-1558169 33 AP014416 Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C24-MedDCM-OCT-S27-C110, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces 9243-9275 10 0.697
NZ_CP046279_2 2.5|1575751|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR 1575751-1575782 32 MK867354 Synechococcus phage S-SCSM1, complete genome 85554-85585 10 0.688
NZ_CP046279_2 2.5|1575751|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR 1575751-1575782 32 NC_031056 Bacillus phage Deep Blue, complete genome 12274-12305 10 0.688

1. spacer 1.23|1558808|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LN890526 (Salmonella enterica subsp. enterica serovar Weltevreden strain 2511STDY5712385 plasmid 3, complete sequence) position: , mismatch: 0, identity: 1.0

gaaagaattggaatttgccattacgcagagtg	CRISPR spacer
gaaagaattggaatttgccattacgcagagtg	Protospacer
********************************

2. spacer 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT matches to JN672684 (Enterobacteria phage F20, partial genome) position: , mismatch: 5, identity: 0.844

ggcgcggaatgatggacgagcgcgagcgaaaa	CRISPR spacer
ggttcggaatgatggacgatcgcgagcgcgaa	Protospacer
**. *************** ******** .**

3. spacer 2.2|1575568|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024424 (Paracoccus yeei strain TT13 plasmid pTT13-2, complete sequence) position: , mismatch: 5, identity: 0.844

-acggcaacggatgcgaccgccagcgcgatccc	CRISPR spacer
tgcggc-acggatgaggccgccagcgcgatctc	Protospacer
 .**** ******* *.**************.*

4. spacer 2.2|1575568|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020440 (Paracoccus yeei strain FDAARGOS_252 plasmid unnamed2, complete sequence) position: , mismatch: 5, identity: 0.844

-acggcaacggatgcgaccgccagcgcgatccc	CRISPR spacer
tgcggc-acggatgaggccgccagcgcgatctc	Protospacer
 .**** ******* *.**************.*

5. spacer 2.2|1575568|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP044082 (Paracoccus yeei strain FDAARGOS_643 plasmid unnamed4, complete sequence) position: , mismatch: 5, identity: 0.844

-acggcaacggatgcgaccgccagcgcgatccc	CRISPR spacer
tgcggc-acggatgaggccgccagcgcgatctc	Protospacer
 .**** ******* *.**************.*

6. spacer 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT matches to NC_049845 (Klebsiella phage PhiKpNIH-2, complete genome) position: , mismatch: 6, identity: 0.812

ggcgcggaatgatggacgagcgcgagcgaaaa	CRISPR spacer
ggttcgggatgatggacgaccgcgagcgcgaa	Protospacer
**. ***.*********** ******** .**

7. spacer 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT matches to MK931442 (Klebsiella phage Sin4, complete genome) position: , mismatch: 6, identity: 0.812

ggcgcggaatgatggacgagcgcgagcgaaaa	CRISPR spacer
ggttcgggatgatggacgaccgcgagcgcgaa	Protospacer
**. ***.*********** ******** .**

8. spacer 1.38|1557832|33|NZ_CP046279|PILER-CR matches to JN672684 (Enterobacteria phage F20, partial genome) position: , mismatch: 6, identity: 0.818

ggcgcggaatgatggacgagcgcgagcgaaaac	CRISPR spacer
ggttcggaatgatggacgatcgcgagcgcgaaa	Protospacer
**. *************** ******** .** 

9. spacer 2.2|1575568|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031080 (Paracoccus yeei strain CCUG 32053 plasmid pYEE2, complete sequence) position: , mismatch: 6, identity: 0.812

-acggcaacggatgcgaccgccagcgcgatccc	CRISPR spacer
tgcggc-acggatgaggccgccagcgcgatctg	Protospacer
 .**** ******* *.**************. 

10. spacer 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT matches to MN101222 (Klebsiella phage KOX9, complete genome) position: , mismatch: 7, identity: 0.781

ggcgcggaatgatggacgagcgcgagcgaaaa	CRISPR spacer
ggtttggaatgatggacgatcgcgagcgcgag	Protospacer
**. .************** ******** .*.

11. spacer 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT matches to MN395285 (Klebsiella phage PhiKpNIH-10, complete genome) position: , mismatch: 7, identity: 0.781

ggcgcggaatgatggacgagcgcgagcgaaaa	CRISPR spacer
ggttcgggatgatggacgaccgcgagcgcgag	Protospacer
**. ***.*********** ******** .*.

12. spacer 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT matches to KY575286 (UNVERIFIED: Klebsiella phage SH-Kp 160016, complete genome) position: , mismatch: 7, identity: 0.781

ggcgcggaatgatggacgagcgcgagcgaaaa	CRISPR spacer
ggttcgggatgatggacgaccgcgagcgcgag	Protospacer
**. ***.*********** ******** .*.

13. spacer 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT matches to MH633486 (Klebsiella phage NJS3, complete genome) position: , mismatch: 7, identity: 0.781

ggcgcggaatgatggacgagcgcgagcgaaaa	CRISPR spacer
ggttcgggatgatggacgaccgcgagcgcgag	Protospacer
**. ***.*********** ******** .*.

14. spacer 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT matches to MK618657 (Klebsiella phage Sanco, complete genome) position: , mismatch: 7, identity: 0.781

ggcgcggaatgatggacgagcgcgagcgaaaa	CRISPR spacer
ggttcgggatgatggacgaccgcgagcgcgag	Protospacer
**. ***.*********** ******** .*.

15. spacer 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT matches to NC_049842 (Klebsiella phage vB_KpnS_15-38_KLPPOU149, complete genome) position: , mismatch: 7, identity: 0.781

ggcgcggaatgatggacgagcgcgagcgaaaa	CRISPR spacer
ggttcgggatgatggacgaccgcgagcgcgag	Protospacer
**. ***.*********** ******** .*.

16. spacer 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT matches to LR757892 (Klebsiella phage vB_KpnS_2811 genome assembly, chromosome: 1) position: , mismatch: 7, identity: 0.781

ggcgcggaatgatggacgagcgcgagcgaaaa	CRISPR spacer
ggttcgggatgatggacgaccgcgagcgcgag	Protospacer
**. ***.*********** ******** .*.

17. spacer 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT matches to MF415412 (Klebsiella phage KPN N141, complete genome) position: , mismatch: 7, identity: 0.781

ggcgcggaatgatggacgagcgcgagcgaaaa	CRISPR spacer
ggttcgggatgatggacgaccgcgagcgcgag	Protospacer
**. ***.*********** ******** .*.

18. spacer 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT matches to MF612072 (Klebsiella phage MezzoGao, complete genome) position: , mismatch: 7, identity: 0.781

ggcgcggaatgatggacgagcgcgagcgaaaa	CRISPR spacer
ggttcgggatgatggacgaccgcgagcgcgag	Protospacer
**. ***.*********** ******** .*.

19. spacer 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT matches to MT894005 (Klebsiella phage MMBB, complete genome) position: , mismatch: 7, identity: 0.781

ggcgcggaatgatggacgagcgcgagcgaaaa	CRISPR spacer
ggttcgggatgatggacgaccgcgagcgcgag	Protospacer
**. ***.*********** ******** .*.

20. spacer 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT matches to MG552615 (Klebsiella virus GML-KpCol1, complete genome) position: , mismatch: 7, identity: 0.781

ggcgcggaatgatggacgagcgcgagcgaaaa	CRISPR spacer
ggttcgggatgatggacgaccgcgagcgcgag	Protospacer
**. ***.*********** ******** .*.

21. spacer 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT matches to MK931445 (Klebsiella phage Shelby, complete genome) position: , mismatch: 7, identity: 0.781

ggcgcggaatgatggacgagcgcgagcgaaaa	CRISPR spacer
ggttcggtatgatggacgaccgcgagcgcgag	Protospacer
**. *** *********** ******** .*.

22. spacer 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT matches to JF501022 (Klebsiella phage KP36, complete genome) position: , mismatch: 7, identity: 0.781

ggcgcggaatgatggacgagcgcgagcgaaaa	CRISPR spacer
ggttcgggatgatggacgaccgcgagcgcgag	Protospacer
**. ***.*********** ******** .*.

23. spacer 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT matches to KP658157 (Klebsiella phage 1513, complete genome) position: , mismatch: 7, identity: 0.781

ggcgcggaatgatggacgagcgcgagcgaaaa	CRISPR spacer
ggttcgggatgatggacgaccgcgagcgcgag	Protospacer
**. ***.*********** ******** .*.

24. spacer 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT matches to MH445453 (Klebsiella phage NJS1, complete genome) position: , mismatch: 7, identity: 0.781

ggcgcggaatgatggacgagcgcgagcgaaaa	CRISPR spacer
ggttcgggatgatggacgaccgcgagcgcgag	Protospacer
**. ***.*********** ******** .*.

25. spacer 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT matches to NC_028760 (Klebsiella phage KLPN1, complete genome) position: , mismatch: 7, identity: 0.781

ggcgcggaatgatggacgagcgcgagcgaaaa	CRISPR spacer
ggttcgggatgatggacgaccgcgagcgcgag	Protospacer
**. ***.*********** ******** .*.

26. spacer 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT matches to NC_049848 (Klebsiella phage KP1801, complete genome) position: , mismatch: 7, identity: 0.781

ggcgcggaatgatggacgagcgcgagcgaaaa	CRISPR spacer
ggttcgggatgatggacgaccgcgagcgcgag	Protospacer
**. ***.*********** ******** .*.

27. spacer 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT matches to MH633484 (Klebsiella phage TAH8, complete genome) position: , mismatch: 7, identity: 0.781

ggcgcggaatgatggacgagcgcgagcgaaaa	CRISPR spacer
ggttcgggatgatggacgaccgcgagcgcgag	Protospacer
**. ***.*********** ******** .*.

28. spacer 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT matches to NC_048043 (Klebsiella phage NJS2, complete genome) position: , mismatch: 7, identity: 0.781

ggcgcggaatgatggacgagcgcgagcgaaaa	CRISPR spacer
ggttcgggatgatggacgaccgcgagcgcgag	Protospacer
**. ***.*********** ******** .*.

29. spacer 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT matches to MK931443 (Klebsiella phage Sweeny, complete genome) position: , mismatch: 7, identity: 0.781

ggcgcggaatgatggacgagcgcgagcgaaaa	CRISPR spacer
ggttcgggatgatggacgaccgcgagcgcgag	Protospacer
**. ***.*********** ******** .*.

30. spacer 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT matches to NC_049838 (Klebsiella phage KL, complete genome) position: , mismatch: 7, identity: 0.781

ggcgcggaatgatggacgagcgcgagcgaaaa	CRISPR spacer
ggttcgggatgatggacgaccgcgagcgcgag	Protospacer
**. ***.*********** ******** .*.

31. spacer 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT matches to MH844531 (Klebsiella phage GH-K3, complete genome) position: , mismatch: 7, identity: 0.781

ggcgcggaatgatggacgagcgcgagcgaaaa	CRISPR spacer
ggttcgggatgatggacgaccgcgagcgcgag	Protospacer
**. ***.*********** ******** .*.

32. spacer 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT matches to NC_048044 (Klebsiella phage NJR15, complete genome) position: , mismatch: 7, identity: 0.781

ggcgcggaatgatggacgagcgcgagcgaaaa	CRISPR spacer
ggttcgggatgatggacgaccgcgagcgcgag	Protospacer
**. ***.*********** ******** .*.

33. spacer 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT matches to MG894052 (Klebsiella phage JY917, complete genome) position: , mismatch: 7, identity: 0.781

ggcgcggaatgatggacgagcgcgagcgaaaa	CRISPR spacer
ggttcgggatgatggacgaccgcgagcgcgag	Protospacer
**. ***.*********** ******** .*.

34. spacer 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT matches to NC_048126 (Klebsiella phage TSK1, complete genome) position: , mismatch: 7, identity: 0.781

ggcgcggaatgatggacgagcgcgagcgaaaa	CRISPR spacer
ggttcgggatgatggacgaccgcgagcgcgag	Protospacer
**. ***.*********** ******** .*.

35. spacer 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT matches to MK931444 (Klebsiella phage Skenny, complete genome) position: , mismatch: 7, identity: 0.781

ggcgcggaatgatggacgagcgcgagcgaaaa	CRISPR spacer
ggttcgggatgatggacgaccgcgagcgcgag	Protospacer
**. ***.*********** ******** .*.

36. spacer 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT matches to NC_048143 (Klebsiella phage KpKT21phi1, complete genome) position: , mismatch: 7, identity: 0.781

ggcgcggaatgatggacgagcgcgagcgaaaa	CRISPR spacer
ggttcgggatgatggacgaccgcgagcgcgag	Protospacer
**. ***.*********** ******** .*.

37. spacer 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT matches to NC_028774 (Klebsiella phage Sushi, complete genome) position: , mismatch: 7, identity: 0.781

ggcgcggaatgatggacgagcgcgagcgaaaa	CRISPR spacer
ggttcgggatgatggacgaccgcgagcgcgag	Protospacer
**. ***.*********** ******** .*.

38. spacer 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT matches to NC_049840 (Klebsiella phage vB_KpnS_FZ10, complete genome) position: , mismatch: 7, identity: 0.781

ggcgcggaatgatggacgagcgcgagcgaaaa	CRISPR spacer
ggttcgggatgatggacgaccgcgagcgcgag	Protospacer
**. ***.*********** ******** .*.

39. spacer 1.7|1557831|32|NZ_CP046279|CRISPRCasFinder,CRT matches to NC_049844 (Klebsiella phage 13, complete genome) position: , mismatch: 7, identity: 0.781

ggcgcggaatgatggacgagcgcgagcgaaaa	CRISPR spacer
ggttcgggatgatggacgaccgcgagcgcgag	Protospacer
**. ***.*********** ******** .*.

40. spacer 1.15|1558319|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054841 (Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

ttctgtttcaccgtcacggcctcggccgggag	CRISPR spacer
ttcgcattcaccgtcacggcctgggcggggtc	Protospacer
***   **************** *** ***  

41. spacer 1.17|1558441|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

gctattgatttccgccagcgacaggtgatcgc-	CRISPR spacer
gctgttgatgtccgccagcgacacgc-cttgcg	Protospacer
***.***** ************* *.  *.** 

42. spacer 1.26|1558991|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR matches to KJ803031 (Dinoroseobacter phage vBDshPR2C, complete genome) position: , mismatch: 7, identity: 0.781

--ctggccataattgactgatatcgagctttggt	CRISPR spacer
gttcagcc--aattgcccgatatcgagctttggt	Protospacer
  ...***  ***** *.****************

43. spacer 1.27|1559052|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR matches to MK416008 (Klebsiella phage ST405-OXA48phi1.3, complete genome) position: , mismatch: 7, identity: 0.781

tttaaagagctggctgctgatgtggatcggat--	CRISPR spacer
cgcaaagagctggctgctgatccgga--ggatga	Protospacer
. .****************** .***  ****  

44. spacer 1.29|1559174|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR matches to MK448714 (Streptococcus phage Javan241, complete genome) position: , mismatch: 7, identity: 0.781

gcgcttaaaccggtttttattaatgttgtttt	CRISPR spacer
gaacgtgaagcggattttattaatgttgttat	Protospacer
* .* *.** *** **************** *

45. spacer 1.38|1557832|33|NZ_CP046279|PILER-CR matches to NC_049845 (Klebsiella phage PhiKpNIH-2, complete genome) position: , mismatch: 7, identity: 0.788

ggcgcggaatgatggacgagcgcgagcgaaaac	CRISPR spacer
ggttcgggatgatggacgaccgcgagcgcgaaa	Protospacer
**. ***.*********** ******** .** 

46. spacer 1.38|1557832|33|NZ_CP046279|PILER-CR matches to MK931442 (Klebsiella phage Sin4, complete genome) position: , mismatch: 7, identity: 0.788

ggcgcggaatgatggacgagcgcgagcgaaaac	CRISPR spacer
ggttcgggatgatggacgaccgcgagcgcgaaa	Protospacer
**. ***.*********** ******** .** 

47. spacer 2.2|1575568|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR matches to NC_009621 (Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequence) position: , mismatch: 7, identity: 0.781

-acggcaacggatgcgaccgccagcgcgatccc	CRISPR spacer
cgcgccga-ggaagcgaccgccagcgcgagccg	Protospacer
 .** *.* *** **************** ** 

48. spacer 2.5|1575751|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR matches to AJ344259 (Sulfolobus virus SIRV-2 genomic DNA) position: , mismatch: 7, identity: 0.781

acaatcttgacaaaattaatcaatacaaatcg---	CRISPR spacer
cgaatcttgaaaaaatttatcaat---aatcgact	Protospacer
  ******** ****** ******   *****   

49. spacer 1.13|1558197|32|NZ_CP046279|CRISPRCasFinder,CRT matches to NZ_CP032323 (Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence) position: , mismatch: 8, identity: 0.75

tggtcgtgaccagcgggcgccg-ctgtgaggcc	CRISPR spacer
tggtcgaggccagcgggcgccgcctgctcaac-	Protospacer
****** *.************* ***.  ..* 

50. spacer 1.15|1558319|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR matches to KM659097 (Paracoccus yeei plasmid pLM20P5, complete sequence) position: , mismatch: 8, identity: 0.75

ttctgtttcaccgtcacggcctcggccgggag	CRISPR spacer
gtccgcagcaccgtcccgccctcggccgggac	Protospacer
 **.*.  ******* ** ************ 

51. spacer 1.15|1558319|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR matches to MH834622 (Arthrobacter phage Noely, complete genome) position: , mismatch: 8, identity: 0.75

ttctgtttcaccgtcacggcctcggccgggag	CRISPR spacer
ttgggcgtcaccgtcacggccccgtccggggc	Protospacer
**  *. **************.** *****. 

52. spacer 1.20|1558625|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010615 (Phaeobacter inhibens strain P92 plasmid pP92_e, complete sequence) position: , mismatch: 8, identity: 0.75

ttcaacctggtgcagatcgttatcgaggaatt------	CRISPR spacer
ttcaacctggtgccgatcgttctc------ttttctga	Protospacer
************* ******* **      **      

53. spacer 1.20|1558625|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010634 (Phaeobacter inhibens strain P78 plasmid pP78_e, complete sequence) position: , mismatch: 8, identity: 0.75

ttcaacctggtgcagatcgttatcgaggaatt------	CRISPR spacer
ttcaacctggtgccgatcgttctc------ttttctga	Protospacer
************* ******* **      **      

54. spacer 1.20|1558625|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010606 (Phaeobacter inhibens strain P83 plasmid pP83_g, complete sequence) position: , mismatch: 8, identity: 0.75

ttcaacctggtgcagatcgttatcgaggaatt------	CRISPR spacer
ttcaacctggtgccgatcgttctc------ttttctga	Protospacer
************* ******* **      **      

55. spacer 1.20|1558625|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010774 (Phaeobacter piscinae strain P13 plasmid pP13_g, complete sequence) position: , mismatch: 8, identity: 0.75

ttcaacctggtgcagatcgttatcgaggaatt------	CRISPR spacer
ttcaacctggtgccgatcgttctc------ttttctga	Protospacer
************* ******* **      **      

56. spacer 1.20|1558625|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010712 (Phaeobacter inhibens strain P66 plasmid pP66_g, complete sequence) position: , mismatch: 8, identity: 0.75

ttcaacctggtgcagatcgttatcgaggaatt------	CRISPR spacer
ttcaacctggtgccgatcgttctc------ttttctga	Protospacer
************* ******* **      **      

57. spacer 1.31|1559296|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP018257 (Calothrix sp. NIES-4071 plasmid plasmid2 DNA, complete genome) position: , mismatch: 8, identity: 0.75

tattgtccacagaaatataaaagtttggaaac	CRISPR spacer
agttgtccacagaaatattaaatttaacaacc	Protospacer
 .**************** *** ** . ** *

58. spacer 1.38|1557832|33|NZ_CP046279|PILER-CR matches to KY575286 (UNVERIFIED: Klebsiella phage SH-Kp 160016, complete genome) position: , mismatch: 8, identity: 0.758

ggcgcggaatgatggacgagcgcgagcgaaaac	CRISPR spacer
ggttcgggatgatggacgaccgcgagcgcgaga	Protospacer
**. ***.*********** ******** .*. 

59. spacer 1.38|1557832|33|NZ_CP046279|PILER-CR matches to MT894005 (Klebsiella phage MMBB, complete genome) position: , mismatch: 8, identity: 0.758

ggcgcggaatgatggacgagcgcgagcgaaaac	CRISPR spacer
ggttcgggatgatggacgaccgcgagcgcgaga	Protospacer
**. ***.*********** ******** .*. 

60. spacer 1.38|1557832|33|NZ_CP046279|PILER-CR matches to MG552615 (Klebsiella virus GML-KpCol1, complete genome) position: , mismatch: 8, identity: 0.758

ggcgcggaatgatggacgagcgcgagcgaaaac	CRISPR spacer
ggttcgggatgatggacgaccgcgagcgcgaga	Protospacer
**. ***.*********** ******** .*. 

61. spacer 1.38|1557832|33|NZ_CP046279|PILER-CR matches to KP658157 (Klebsiella phage 1513, complete genome) position: , mismatch: 8, identity: 0.758

ggcgcggaatgatggacgagcgcgagcgaaaac	CRISPR spacer
ggttcgggatgatggacgaccgcgagcgcgaga	Protospacer
**. ***.*********** ******** .*. 

62. spacer 1.38|1557832|33|NZ_CP046279|PILER-CR matches to NC_049848 (Klebsiella phage KP1801, complete genome) position: , mismatch: 8, identity: 0.758

ggcgcggaatgatggacgagcgcgagcgaaaac	CRISPR spacer
ggttcgggatgatggacgaccgcgagcgcgaga	Protospacer
**. ***.*********** ******** .*. 

63. spacer 1.38|1557832|33|NZ_CP046279|PILER-CR matches to MH844531 (Klebsiella phage GH-K3, complete genome) position: , mismatch: 8, identity: 0.758

ggcgcggaatgatggacgagcgcgagcgaaaac	CRISPR spacer
ggttcgggatgatggacgaccgcgagcgcgaga	Protospacer
**. ***.*********** ******** .*. 

64. spacer 1.38|1557832|33|NZ_CP046279|PILER-CR matches to MG894052 (Klebsiella phage JY917, complete genome) position: , mismatch: 8, identity: 0.758

ggcgcggaatgatggacgagcgcgagcgaaaac	CRISPR spacer
ggttcgggatgatggacgaccgcgagcgcgaga	Protospacer
**. ***.*********** ******** .*. 

65. spacer 1.38|1557832|33|NZ_CP046279|PILER-CR matches to NC_048143 (Klebsiella phage KpKT21phi1, complete genome) position: , mismatch: 8, identity: 0.758

ggcgcggaatgatggacgagcgcgagcgaaaac	CRISPR spacer
ggttcgggatgatggacgaccgcgagcgcgaga	Protospacer
**. ***.*********** ******** .*. 

66. spacer 1.38|1557832|33|NZ_CP046279|PILER-CR matches to NC_049844 (Klebsiella phage 13, complete genome) position: , mismatch: 8, identity: 0.758

ggcgcggaatgatggacgagcgcgagcgaaaac	CRISPR spacer
ggttcgggatgatggacgaccgcgagcgcgaga	Protospacer
**. ***.*********** ******** .*. 

67. spacer 1.38|1557832|33|NZ_CP046279|PILER-CR matches to MN395285 (Klebsiella phage PhiKpNIH-10, complete genome) position: , mismatch: 8, identity: 0.758

ggcgcggaatgatggacgagcgcgagcgaaaac	CRISPR spacer
ggttcgggatgatggacgaccgcgagcgcgaga	Protospacer
**. ***.*********** ******** .*. 

68. spacer 1.38|1557832|33|NZ_CP046279|PILER-CR matches to MH633486 (Klebsiella phage NJS3, complete genome) position: , mismatch: 8, identity: 0.758

ggcgcggaatgatggacgagcgcgagcgaaaac	CRISPR spacer
ggttcgggatgatggacgaccgcgagcgcgaga	Protospacer
**. ***.*********** ******** .*. 

69. spacer 1.38|1557832|33|NZ_CP046279|PILER-CR matches to MK618657 (Klebsiella phage Sanco, complete genome) position: , mismatch: 8, identity: 0.758

ggcgcggaatgatggacgagcgcgagcgaaaac	CRISPR spacer
ggttcgggatgatggacgaccgcgagcgcgaga	Protospacer
**. ***.*********** ******** .*. 

70. spacer 1.38|1557832|33|NZ_CP046279|PILER-CR matches to NC_049842 (Klebsiella phage vB_KpnS_15-38_KLPPOU149, complete genome) position: , mismatch: 8, identity: 0.758

ggcgcggaatgatggacgagcgcgagcgaaaac	CRISPR spacer
ggttcgggatgatggacgaccgcgagcgcgaga	Protospacer
**. ***.*********** ******** .*. 

71. spacer 1.38|1557832|33|NZ_CP046279|PILER-CR matches to LR757892 (Klebsiella phage vB_KpnS_2811 genome assembly, chromosome: 1) position: , mismatch: 8, identity: 0.758

ggcgcggaatgatggacgagcgcgagcgaaaac	CRISPR spacer
ggttcgggatgatggacgaccgcgagcgcgaga	Protospacer
**. ***.*********** ******** .*. 

72. spacer 1.38|1557832|33|NZ_CP046279|PILER-CR matches to MF415412 (Klebsiella phage KPN N141, complete genome) position: , mismatch: 8, identity: 0.758

ggcgcggaatgatggacgagcgcgagcgaaaac	CRISPR spacer
ggttcgggatgatggacgaccgcgagcgcgaga	Protospacer
**. ***.*********** ******** .*. 

73. spacer 1.38|1557832|33|NZ_CP046279|PILER-CR matches to MF612072 (Klebsiella phage MezzoGao, complete genome) position: , mismatch: 8, identity: 0.758

ggcgcggaatgatggacgagcgcgagcgaaaac	CRISPR spacer
ggttcgggatgatggacgaccgcgagcgcgaga	Protospacer
**. ***.*********** ******** .*. 

74. spacer 1.38|1557832|33|NZ_CP046279|PILER-CR matches to MK931445 (Klebsiella phage Shelby, complete genome) position: , mismatch: 8, identity: 0.758

ggcgcggaatgatggacgagcgcgagcgaaaac	CRISPR spacer
ggttcggtatgatggacgaccgcgagcgcgaga	Protospacer
**. *** *********** ******** .*. 

75. spacer 1.38|1557832|33|NZ_CP046279|PILER-CR matches to JF501022 (Klebsiella phage KP36, complete genome) position: , mismatch: 8, identity: 0.758

ggcgcggaatgatggacgagcgcgagcgaaaac	CRISPR spacer
ggttcgggatgatggacgaccgcgagcgcgaga	Protospacer
**. ***.*********** ******** .*. 

76. spacer 1.38|1557832|33|NZ_CP046279|PILER-CR matches to MH445453 (Klebsiella phage NJS1, complete genome) position: , mismatch: 8, identity: 0.758

ggcgcggaatgatggacgagcgcgagcgaaaac	CRISPR spacer
ggttcgggatgatggacgaccgcgagcgcgaga	Protospacer
**. ***.*********** ******** .*. 

77. spacer 1.38|1557832|33|NZ_CP046279|PILER-CR matches to NC_028760 (Klebsiella phage KLPN1, complete genome) position: , mismatch: 8, identity: 0.758

ggcgcggaatgatggacgagcgcgagcgaaaac	CRISPR spacer
ggttcgggatgatggacgaccgcgagcgcgaga	Protospacer
**. ***.*********** ******** .*. 

78. spacer 1.38|1557832|33|NZ_CP046279|PILER-CR matches to MH633484 (Klebsiella phage TAH8, complete genome) position: , mismatch: 8, identity: 0.758

ggcgcggaatgatggacgagcgcgagcgaaaac	CRISPR spacer
ggttcgggatgatggacgaccgcgagcgcgaga	Protospacer
**. ***.*********** ******** .*. 

79. spacer 1.38|1557832|33|NZ_CP046279|PILER-CR matches to NC_048043 (Klebsiella phage NJS2, complete genome) position: , mismatch: 8, identity: 0.758

ggcgcggaatgatggacgagcgcgagcgaaaac	CRISPR spacer
ggttcgggatgatggacgaccgcgagcgcgaga	Protospacer
**. ***.*********** ******** .*. 

80. spacer 1.38|1557832|33|NZ_CP046279|PILER-CR matches to MK931443 (Klebsiella phage Sweeny, complete genome) position: , mismatch: 8, identity: 0.758

ggcgcggaatgatggacgagcgcgagcgaaaac	CRISPR spacer
ggttcgggatgatggacgaccgcgagcgcgaga	Protospacer
**. ***.*********** ******** .*. 

81. spacer 1.38|1557832|33|NZ_CP046279|PILER-CR matches to NC_049838 (Klebsiella phage KL, complete genome) position: , mismatch: 8, identity: 0.758

ggcgcggaatgatggacgagcgcgagcgaaaac	CRISPR spacer
ggttcgggatgatggacgaccgcgagcgcgaga	Protospacer
**. ***.*********** ******** .*. 

82. spacer 1.38|1557832|33|NZ_CP046279|PILER-CR matches to NC_048044 (Klebsiella phage NJR15, complete genome) position: , mismatch: 8, identity: 0.758

ggcgcggaatgatggacgagcgcgagcgaaaac	CRISPR spacer
ggttcgggatgatggacgaccgcgagcgcgaga	Protospacer
**. ***.*********** ******** .*. 

83. spacer 1.38|1557832|33|NZ_CP046279|PILER-CR matches to NC_048126 (Klebsiella phage TSK1, complete genome) position: , mismatch: 8, identity: 0.758

ggcgcggaatgatggacgagcgcgagcgaaaac	CRISPR spacer
ggttcgggatgatggacgaccgcgagcgcgaga	Protospacer
**. ***.*********** ******** .*. 

84. spacer 1.38|1557832|33|NZ_CP046279|PILER-CR matches to MK931444 (Klebsiella phage Skenny, complete genome) position: , mismatch: 8, identity: 0.758

ggcgcggaatgatggacgagcgcgagcgaaaac	CRISPR spacer
ggttcgggatgatggacgaccgcgagcgcgaga	Protospacer
**. ***.*********** ******** .*. 

85. spacer 1.38|1557832|33|NZ_CP046279|PILER-CR matches to NC_028774 (Klebsiella phage Sushi, complete genome) position: , mismatch: 8, identity: 0.758

ggcgcggaatgatggacgagcgcgagcgaaaac	CRISPR spacer
ggttcgggatgatggacgaccgcgagcgcgaga	Protospacer
**. ***.*********** ******** .*. 

86. spacer 1.38|1557832|33|NZ_CP046279|PILER-CR matches to NC_049840 (Klebsiella phage vB_KpnS_FZ10, complete genome) position: , mismatch: 8, identity: 0.758

ggcgcggaatgatggacgagcgcgagcgaaaac	CRISPR spacer
ggttcgggatgatggacgaccgcgagcgcgaga	Protospacer
**. ***.*********** ******** .*. 

87. spacer 2.2|1575568|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 8, identity: 0.75

acggcaacggatgcgaccgccagcgcgatccc	CRISPR spacer
cgggccgaggatgcgaccgcgagcgcgagccg	Protospacer
  *** . ************ ******* ** 

88. spacer 2.2|1575568|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR matches to NC_008826 (Methylibium petroleiphilum PM1 plasmid RPME01, complete sequence) position: , mismatch: 8, identity: 0.75

acggcaac-----ggatgcgaccgccagcgcgatccc	CRISPR spacer
-----aacttcctcgaagcgaccgccaccgcgatccc	Protospacer
     ***      ** ********** *********

89. spacer 2.5|1575751|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR matches to GU943054 (Uncultured phage MedDCM-OCT-S04-C24 genomic sequence) position: , mismatch: 8, identity: 0.75

acaatcttgacaaaattaatcaatacaaatcg	CRISPR spacer
acaatctcgaaaaaattaatcaaaaaatttta	Protospacer
*******.** ************ * *  *..

90. spacer 2.5|1575751|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR matches to MN693497 (Marine virus AFVG_25M179, complete genome) position: , mismatch: 8, identity: 0.75

----acaatcttgacaaaattaatcaatacaaatcg	CRISPR spacer
gctcacagc----acaaaattaatatatacaaatcg	Protospacer
    ***..    ***********  **********

91. spacer 1.4|1557647|32|NZ_CP046279|CRISPRCasFinder,CRT matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

tttttccggatggttcgctgtcgtcccgctcc	CRISPR spacer
gatttccggattgttcgctgtggtcacaagtc	Protospacer
  ********* ********* *** *.  .*

92. spacer 1.6|1557770|32|NZ_CP046279|CRISPRCasFinder,CRT matches to AP018319 (Nostoc sp. HK-01 plasmid plasmid1 DNA, complete genome) position: , mismatch: 9, identity: 0.719

gcgcagacaaaaaatattaacgacctgattat	CRISPR spacer
atcaacccaaaaaatattaaacacctgatttt	Protospacer
..  *  *************  ******** *

93. spacer 1.12|1558136|32|NZ_CP046279|CRISPRCasFinder,CRT matches to AP013386 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G15, isolate: uvMED-CGR-C23-MedDCM-OCT-S37-C51) position: , mismatch: 9, identity: 0.719

acaattacataacaggtgtgacagacggcggg	CRISPR spacer
gcaattacataacagatgttacagatagattt	Protospacer
.**************.*** *****..*    

94. spacer 1.12|1558136|32|NZ_CP046279|CRISPRCasFinder,CRT matches to GU943014 (Uncultured phage MedDCM-OCT-S04-C1161 genomic sequence) position: , mismatch: 9, identity: 0.719

acaattacataacaggtgtgacagacggcggg	CRISPR spacer
gcaattacataacagatgttacagatagattt	Protospacer
.**************.*** *****..*    

95. spacer 1.12|1558136|32|NZ_CP046279|CRISPRCasFinder,CRT matches to AP014420 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C24-MedDCM-OCT-S43-C167, *** SEQUENCING IN PROGRESS ***, 5 ordered pieces) position: , mismatch: 9, identity: 0.719

acaattacataacaggtgtgacagacggcggg	CRISPR spacer
gcaattacataacagatgttacagatagattt	Protospacer
.**************.*** *****..*    

96. spacer 1.12|1558136|32|NZ_CP046279|CRISPRCasFinder,CRT matches to GU943017 (Uncultured phage MedDCM-OCT-S04-C1227 genomic sequence) position: , mismatch: 9, identity: 0.719

acaattacataacaggtgtgacagacggcggg	CRISPR spacer
gcaattacataacagatgttacagatagattt	Protospacer
.**************.*** *****..*    

97. spacer 1.12|1558136|32|NZ_CP046279|CRISPRCasFinder,CRT matches to AP014417 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C24-MedDCM-OCT-S39-C59, *** SEQUENCING IN PROGRESS ***, 5 ordered pieces) position: , mismatch: 9, identity: 0.719

acaattacataacaggtgtgacagacggcggg	CRISPR spacer
gcaattacataacagatgttacagatagattt	Protospacer
.**************.*** *****..*    

98. spacer 1.12|1558136|32|NZ_CP046279|CRISPRCasFinder,CRT matches to GU943022 (Uncultured phage MedDCM-OCT-S04-C890 genomic sequence) position: , mismatch: 9, identity: 0.719

acaattacataacaggtgtgacagacggcggg	CRISPR spacer
gcaattacataacagatgttacagatagattt	Protospacer
.**************.*** *****..*    

99. spacer 1.12|1558136|32|NZ_CP046279|CRISPRCasFinder,CRT matches to GU943013 (Uncultured phage MedDCM-OCT-S04-C1035 genomic sequence) position: , mismatch: 9, identity: 0.719

acaattacataacaggtgtgacagacggcggg	CRISPR spacer
gcaattacataacagatgttacagatagattt	Protospacer
.**************.*** *****..*    

100. spacer 1.12|1558136|32|NZ_CP046279|CRISPRCasFinder,CRT matches to AP014416 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C24-MedDCM-OCT-S27-C110, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces) position: , mismatch: 9, identity: 0.719

acaattacataacaggtgtgacagacggcggg	CRISPR spacer
gcaattacataacagatgttacagatagattt	Protospacer
.**************.*** *****..*    

101. spacer 1.14|1558258|32|NZ_CP046279|CRISPRCasFinder,CRT matches to NZ_CP016617 (Microvirga ossetica strain V5/3m plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

atcgccacatgcgacgcctcttttttctgtac	CRISPR spacer
atcgccacatgccacgcatctttgcgccgaca	Protospacer
************ **** ***** . *.*   

102. spacer 1.15|1558319|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR matches to MF919512 (Mycobacterium phage Klein, complete genome) position: , mismatch: 9, identity: 0.719

ttctgtttcaccgtcacggcctcggccgggag	CRISPR spacer
atatcacccaccgtcacgtcatcggccgggat	Protospacer
 * *  ..********** * ********** 

103. spacer 1.22|1558747|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049117 (Pantoea stewartii strain ZJ-FGZX1 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

gctccgccctgctgcctcacttttactgtctg	CRISPR spacer
gccccgccctgctgcctcagttttgttactgt	Protospacer
**.**************** ****..*...  

104. spacer 1.22|1558747|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP035035 (Pantoea ananatis strain NN08200 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

gctccgccctgctgcctcacttttactgtctg	CRISPR spacer
gccccgccctgctgcctcagttttgttactgt	Protospacer
**.**************** ****..*...  

105. spacer 1.27|1559052|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR matches to MG893203 (Vibrio phage VP06, complete genome) position: , mismatch: 9, identity: 0.719

tttaaagagctggctgctgatgtggatcggat	CRISPR spacer
tttaaagagctggctgcgggtgtagctgcttc	Protospacer
***************** *.***.* *    .

106. spacer 1.29|1559174|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039706 (Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence) position: , mismatch: 9, identity: 0.719

gcgcttaaaccggtttttattaatgttgtttt	CRISPR spacer
ccttttaaacctgtttttaataatgtttcata	Protospacer
 * .******* ******* ******* . * 

107. spacer 1.1|1557464|32|NZ_CP046279|CRISPRCasFinder,CRT matches to NZ_CP015322 (Mesorhizobium amorphae CCNWGS0123 plasmid pM0123d, complete sequence) position: , mismatch: 10, identity: 0.688

tttttagagatgtacacaccgtcggccttttg	CRISPR spacer
gcggtggagatgaacacgccgtcggccttgcc	Protospacer
 .  *.****** ****.*********** . 

108. spacer 1.1|1557464|32|NZ_CP046279|CRISPRCasFinder,CRT matches to NZ_CP017104 (Rhizobium gallicum strain IE4872 plasmid pRgalIE4872c, complete sequence) position: , mismatch: 10, identity: 0.688

tttttagagatgtacacaccgtcggccttttg	CRISPR spacer
gcggtggagatgaacacgccgtcggccttgcc	Protospacer
 .  *.****** ****.*********** . 

109. spacer 1.1|1557464|32|NZ_CP046279|CRISPRCasFinder,CRT matches to CP006879 (Rhizobium gallicum bv. gallicum R602 plasmid pRgalR602b, complete sequence) position: , mismatch: 10, identity: 0.688

tttttagagatgtacacaccgtcggccttttg	CRISPR spacer
gcggtggagatgaacacgccgtcggccttgcc	Protospacer
 .  *.****** ****.*********** . 

110. spacer 1.15|1558319|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040821 (Paraoceanicella profunda strain D4M1 plasmid pD4M1C, complete sequence) position: , mismatch: 10, identity: 0.688

ttctgtttcaccgtcacggcctcggccgggag	CRISPR spacer
tcgccgatctccgccacggcctcggccgggct	Protospacer
*. .   ** ***.****************  

111. spacer 1.15|1558319|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR matches to MN908686 (Microbacterium phage Zepp, complete genome) position: , mismatch: 10, identity: 0.688

ttctgtttcaccgtcacggcctcggccgggag	CRISPR spacer
tcgatcaccaccggcacgtcctcggccgggat	Protospacer
*.   . .***** **** ************ 

112. spacer 1.15|1558319|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR matches to MT889377 (Microbacterium phage Zayuliv, complete genome) position: , mismatch: 10, identity: 0.688

ttctgtttcaccgtcacggcctcggccgggag	CRISPR spacer
tcgatcaccaccggcacgtcctcggccgggat	Protospacer
*.   . .***** **** ************ 

113. spacer 1.19|1558564|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR matches to NC_014309 (Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome) position: , mismatch: 10, identity: 0.688

tctctcacg--------taaaaattaaacacccgatacgg	CRISPR spacer
--------gagaaatgataaaaattaaaaatccgatacgg	Protospacer
        *        *********** *.*********

114. spacer 1.29|1559174|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR matches to NC_018493 (Bacillus cereus FRI-35 plasmid p02, complete sequence) position: , mismatch: 10, identity: 0.688

gcgcttaaaccggtttttattaatgttgtttt	CRISPR spacer
taataagaactggtttttattaatgttgttac	Protospacer
  ..  .***.******************* .

115. spacer 1.31|1559296|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045273 (Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence) position: , mismatch: 10, identity: 0.688

tattgtccacagaaatataaaagtttggaaac	CRISPR spacer
tattggccagagaaatataaaagctatattct	Protospacer
***** *** *************.*  .   .

116. spacer 1.43|1558137|33|NZ_CP046279|PILER-CR matches to AP013386 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G15, isolate: uvMED-CGR-C23-MedDCM-OCT-S37-C51) position: , mismatch: 10, identity: 0.697

acaattacataacaggtgtgacagacggcgggc	CRISPR spacer
gcaattacataacagatgttacagatagatttg	Protospacer
.**************.*** *****..*     

117. spacer 1.43|1558137|33|NZ_CP046279|PILER-CR matches to GU943014 (Uncultured phage MedDCM-OCT-S04-C1161 genomic sequence) position: , mismatch: 10, identity: 0.697

acaattacataacaggtgtgacagacggcgggc	CRISPR spacer
gcaattacataacagatgttacagatagatttg	Protospacer
.**************.*** *****..*     

118. spacer 1.43|1558137|33|NZ_CP046279|PILER-CR matches to AP014420 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C24-MedDCM-OCT-S43-C167, *** SEQUENCING IN PROGRESS ***, 5 ordered pieces) position: , mismatch: 10, identity: 0.697

acaattacataacaggtgtgacagacggcgggc	CRISPR spacer
gcaattacataacagatgttacagatagatttg	Protospacer
.**************.*** *****..*     

119. spacer 1.43|1558137|33|NZ_CP046279|PILER-CR matches to GU943017 (Uncultured phage MedDCM-OCT-S04-C1227 genomic sequence) position: , mismatch: 10, identity: 0.697

acaattacataacaggtgtgacagacggcgggc	CRISPR spacer
gcaattacataacagatgttacagatagatttg	Protospacer
.**************.*** *****..*     

120. spacer 1.43|1558137|33|NZ_CP046279|PILER-CR matches to AP014417 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C24-MedDCM-OCT-S39-C59, *** SEQUENCING IN PROGRESS ***, 5 ordered pieces) position: , mismatch: 10, identity: 0.697

acaattacataacaggtgtgacagacggcgggc	CRISPR spacer
gcaattacataacagatgttacagatagatttg	Protospacer
.**************.*** *****..*     

121. spacer 1.43|1558137|33|NZ_CP046279|PILER-CR matches to GU943022 (Uncultured phage MedDCM-OCT-S04-C890 genomic sequence) position: , mismatch: 10, identity: 0.697

acaattacataacaggtgtgacagacggcgggc	CRISPR spacer
gcaattacataacagatgttacagatagatttg	Protospacer
.**************.*** *****..*     

122. spacer 1.43|1558137|33|NZ_CP046279|PILER-CR matches to GU943013 (Uncultured phage MedDCM-OCT-S04-C1035 genomic sequence) position: , mismatch: 10, identity: 0.697

acaattacataacaggtgtgacagacggcgggc	CRISPR spacer
gcaattacataacagatgttacagatagatttg	Protospacer
.**************.*** *****..*     

123. spacer 1.43|1558137|33|NZ_CP046279|PILER-CR matches to AP014416 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C24-MedDCM-OCT-S27-C110, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces) position: , mismatch: 10, identity: 0.697

acaattacataacaggtgtgacagacggcgggc	CRISPR spacer
gcaattacataacagatgttacagatagatttg	Protospacer
.**************.*** *****..*     

124. spacer 2.5|1575751|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR matches to MK867354 (Synechococcus phage S-SCSM1, complete genome) position: , mismatch: 10, identity: 0.688

acaatcttgacaaaattaatcaatacaaatcg	CRISPR spacer
gtgttcttgaaaaaattaatcattacatgtat	Protospacer
... ****** *********** **** .*  

125. spacer 2.5|1575751|32|NZ_CP046279|CRISPRCasFinder,CRT,PILER-CR matches to NC_031056 (Bacillus phage Deep Blue, complete genome) position: , mismatch: 10, identity: 0.688

acaatcttgacaaaattaatcaatacaaatcg	CRISPR spacer
attcaaatgacaaaattaaacaatactaataa	Protospacer
*.     ************ ****** *** .

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 420246 : 426898 10 Salmonella_phage(28.57%) NA NA
DBSCAN-SWA_2 601458 : 608077 11 Enterobacteria_phage(16.67%) integrase attL 602722:602736|attR 613621:613635
DBSCAN-SWA_3 710739 : 717987 8 Morganella_phage(33.33%) NA NA
DBSCAN-SWA_4 794900 : 806389 10 Bacillus_phage(25.0%) NA NA
DBSCAN-SWA_5 873554 : 882726 10 Enterobacteria_phage(66.67%) tRNA NA
DBSCAN-SWA_6 4163496 : 4172714 12 Salmonella_phage(80.0%) tail,integrase attL 4156038:4156051|attR 4175083:4175096
DBSCAN-SWA_7 4465155 : 4518927 68 Salmonella_phage(50.0%) terminase,holin,protease,tail,capsid,lysis,portal,head,tRNA,integrase attL 4469240:4469255|attR 4511941:4511956
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage