CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP046040	Streptococcus equi subsp. zooepidemicus strain OH-71905 chromosome, complete genome	4 crisprs	DEDDh,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,RT,DinG,csm6	2	20	8	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP046040_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046040_1

500651-501352

Orphan

Consensus_repeat	Method
CTNAGGTTNNGGNTTAGGCTCAGG	CRT

11 spacers

The CRISPR arrays of NZ_CP046040_1

>merge|NZ_CP046040|1|500651-501352|CRT
CGCTGGTTTAGGCTTAGGTTCCGGTTTAGGCTCAGGTTGTGGCTTAGGCTCAGGCTTAGGCATTGGTTCTGGCTTAGGTTCCGGTTTAGGATTAGGTTCTGGCTTAGGCATTGGCTGCGGCATTGGTTCAGGCTTAGGCTCTGGTTCAGGCATTGGCTCAGGCTTAGGCTCTAGTTTAGGCATTGGCTCAGGTTTAGGCATTGGCTCAGGTTTAGGCATTGGCTCAGGCTTAGGCTCAGGTTTAGGCATTGGTTCTGGCTGAGGTTCCGGTTTAGGCTCAGGATCTGGCTTAGGCTCAGGTTTAGGCATTGGTTCTGGCTGAGGTTCCGGTTTAGGCTCAGGATCTAGCTTAGGCTCAGGTTTAGGCATTGGCTCAGGCTTAGGCTCAGGTTTAGGCATTGGTTCTGGCTGAGGTTCCGGTTTAGGCTCAGGATCTGGCTTAGGCTCAGGTTTAGGCATTGGTTCTGGCTGAGGTTCCGGTTTAGGCTCAGGATCTGGCTTAGGCTCAGGTTTAGGCATTGGTTCTGGCTTAGGCTCAGGTTTAGGCATTGGTTCTGGCTGAGGTTCCGGTTTAGGCTCAGGATCTGGCTTAGGCTCAGGTTTAGGCATTGGTTCTGGCTGAGGTTCCGGTTTAGGCTCAGGTTCTGGCTTAGGCTCAGGCTTAGGCATTGGTTCTGGCTTAGGTTTAGGCTTAGGTTCTGG

>NZ_CP046040|1|1|500651-501352|CRT
CGCTGGTTTAGGCTTAGGTTCCGG	TTTAGGCTCAGGTTGTGGCTTAGG
CTCAGGCTTAGGCATTGGTTCTGG	CTTAGGTTCCGGTTTAGGATTAGGTTCTGGCTTAGGCATTGGCTGCGGCATTGGTTCAGGCTTAGG
CTCTGGTTCAGGCATTGGCTCAGG	CTTAGGCTCTAGTTTAGGCATTGG
CTCAGGTTTAGGCATTGGCTCAGG	TTTAGGCATTGGCTCAGGCTTAGGCTCAGGTTTAGGCATTGGTTCTGGCTGAGGTTCCGGTTTAGG
CTCAGGATCTGGCTTAGGCTCAGG	TTTAGGCATTGGTTCTGGCTGAGGTTCCGGTTTAGG
CTCAGGATCTAGCTTAGGCTCAGG	TTTAGGCATTGGCTCAGGCTTAGGCTCAGGTTTAGGCATTGGTTCTGG
CTGAGGTTCCGGTTTAGGCTCAGG	ATCTGGCTTAGGCTCAGGTTTAGGCATTGGTTCTGG
CTGAGGTTCCGGTTTAGGCTCAGG	ATCTGGCTTAGGCTCAGGTTTAGG
CATTGGTTCTGGCTTAGGCTCAGG	TTTAGGCATTGGTTCTGG
CTGAGGTTCCGGTTTAGGCTCAGG	ATCTGGCTTAGGCTCAGGTTTAGGCATTGGTTCTGG
CTGAGGTTCCGGTTTAGGCTCAGG	TTCTGGCTTAGGCTCAGGCTTAGGCATTGGTTCTGG
CTTAGGTTTAGGCTTAGGTTCTGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046040.1\|WP_014622426.1\|496457_497144_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046040.1\|WP_014622427.1\|497166_498090_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP046040.1\|WP_014622422.1\|492432_493383_+\|SagB/ThcOx-family-dehydrogenase	unknown	unknown	gnl\|CDD\|188352
NZ_CP046040.1\|WP_014622423.1\|493379_494444_+\|Streptolysin-S-biosynthesis-protein	unknown	unknown	gnl\|CDD\|200298
NZ_CP046040.1\|WP_012515137.1\|491254_491512_+\|DUF896-family-protein	unknown	unknown	gnl\|CDD\|179440
NZ_CP046040.1\|WP_014622424.1\|494456_495815_+\|Streptolysin-S-biosynthesis-protein-SagD	unknown	unknown	gnl\|CDD\|274674
NZ_CP046040.1\|WP_012679132.1\|508386_508899_+\|methylated-DNA--[protein]-cysteine-S-methyltransferase	unknown	unknown	gnl\|CDD\|223427
NZ_CP046040.1\|WP_014622429.1\|499222_500341_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|378925
NZ_CP046040.1\|WP_014622437.1\|510511_515410_+\|S8-family-serine-peptidase	unknown	unknown	gnl\|CDD\|173801
NZ_CP046040.1\|WP_014622438.1\|515584_517264_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046040.1\|WP_014622434.1\|506535_507165_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|281866
NZ_CP046040.1\|WP_012678394.1\|492040_492205_+\|streptolysin-S-family-bacteriocin	unknown	unknown	gnl\|CDD\|215467
NZ_CP046040.1\|WP_014622433.1\|504976_506062_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046040.1\|WP_012515158.1\|509331_510159_-\|exodeoxyribonuclease-III	unknown	unknown	gnl\|CDD\|197321
NZ_CP046040.1\|WP_014622428.1\|498098_499226_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|378925
NZ_CP046040.1\|WP_012515154.1\|507375_507930_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP046040.1\|WP_154293414.1\|502372_502663_-\|LPXTG-cell-wall-anchor-domain-containing-protein	unknown	unknown	gnl\|CDD\|380190
NZ_CP046040.1\|WP_021320451.1\|495789_496461_+\|CPBP-family-intramembrane-metalloprotease	unknown	unknown	gnl\|CDD\|376806
NZ_CP046040.1\|WP_014622436.1\|508902_509256_+\|arsenate-reductase-family-protein	unknown	unknown	gnl\|CDD\|239334
NZ_CP046040.1\|WP_154293415.1\|502693_504562_-\|thioester-forming-surface-anchored-protein	unknown	unknown	gnl\|CDD\|237171

Protein	Function_ID	Function_description	E-value
NZ_CP046040.1\|WP_014622423.1\|493379_494444_+\|Streptolysin-S-biosynthesis-protein	gnl\|CDD\|200298	TIGR03603, cyclo_dehy_ocin, thiazole/oxazole-forming peptide maturase, SagC family component. Members of this protein family include enzymes related to SagC, a protein involved in thiazole/oxazole cyclodehydration modifications during biosynthesis of streptolysin S in Streptococcus pyogenes from the protoxin polypeptide (product of the sagA gene). Recent evidence suggests that the YcaO/SagD-like component, not this component, performs an ATP-dependent cyclodehydration. This protein family serves as a marker for widely distributed prokaryotic systems for making a general class of heterocycle-containing bacteriocins. Note that this model does not find all possible examples of bacteriocin biosynthesis cyclodehydratases, an in particular misses the E. coli plasmid protein McbB of microcin B17 biosynthesis. [Cellular processes, Pathogenesis].	5.87964e-114
NZ_CP046040.1\|WP_014622427.1\|497166_498090_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	2.46771e-102
NZ_CP046040.1\|WP_014622422.1\|492432_493383_+\|SagB/ThcOx-family-dehydrogenase	gnl\|CDD\|188352	TIGR03605, antibiot_sagB, SagB-type dehydrogenase domain. SagB of Sterptococcus pyogenes participates in the maturation of streptolysin S from a ribosomally produced precursor polypeptide. Chemically similar systems operate on highly diverse sets of bacteriocin precursors in numerous other bacteria. This model describes a domain within SgaB and homologous regions from other proteins, many of which appear to be involved in biosynthesis of secondary metabolites. While some substrates may be intermediates in non-ribosomal peptide syntheses, others are involved in heterocycle-containing bacteriocin biosynthesis, and can be found near SgaC-like (see TIGR03603, cyclodehydratase) and SgaD-like (see TIGR03604, "docking") proteins. Members of this domain family are heterogeneous in length, as many have a partial second copy of the domain represented here. The incomplete second domain scores below the cutoffs to this model in most cases.	2.46448e-54
NZ_CP046040.1\|WP_012515137.1\|491254_491512_+\|DUF896-family-protein	gnl\|CDD\|179440	PRK02539, PRK02539, DUF896 family protein.	2.34777e-43
NZ_CP046040.1\|WP_014622424.1\|494456_495815_+\|Streptolysin-S-biosynthesis-protein-SagD	gnl\|CDD\|274674	TIGR03604, hypothetical_protein, thiazole/oxazole-forming peptide maturase, SagD family component. Members of this protein family include enzymes related to SagD, previously referred to as a scaffold or docking protein involved in the biosynthesis of streptolysin S in Streptococcus pyogenes from the protoxin polypeptide (product of the sagA gene). Newer evidence describes an enzymatic activity, an ATP-dependent cyclodehydration reaction, previously ascribed to the SagC component. This protein family serves as a marker for widely distributed prokaryotic systems for making a general class of heterocycle-containing bacteriocins.	7.75593e-124
NZ_CP046040.1\|WP_012679132.1\|508386_508899_+\|methylated-DNA--[protein]-cysteine-S-methyltransferase	gnl\|CDD\|223427	COG0350, Ada, Methylated DNA-protein cysteine methyltransferase [DNA replication, recombination, and repair].	2.84468e-49
NZ_CP046040.1\|WP_014622429.1\|499222_500341_+\|ABC-transporter-permease	gnl\|CDD\|378925	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein. This family is related to the ABC-2 membrane transporter family pfam01061.	4.83226e-26
NZ_CP046040.1\|WP_014622434.1\|506535_507165_-\|hypothetical-protein	gnl\|CDD\|281866	pfam03932, CutC, CutC family. Copper transport in Escherichia coli is mediated by the products of at least six genes, cutA, cutB, cutC, cutD, cutE, and cutF. A mutation in one or more of these genes results in an increased copper sensitivity. Members of this family are between 200 and 300 amino acids in length are found in both eukaryotes and bacteria.	8.25616e-90
NZ_CP046040.1\|WP_012678394.1\|492040_492205_+\|streptolysin-S-family-bacteriocin	gnl\|CDD\|215467	PLN02866, PLN02866, phospholipase D.	0.00252136
NZ_CP046040.1\|WP_014622436.1\|508902_509256_+\|arsenate-reductase-family-protein	gnl\|CDD\|239334	cd03036, ArsC_like, Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC. Proteins containing a redox active CXXC motif like TRX and glutaredoxin (GRX) function as protein disulfide oxidoreductases, altering the redox state of target proteins via the reversible oxidation of the active site dithiol. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via GRX, through a single catalytic cysteine.	6.5609e-53
NZ_CP046040.1\|WP_012515158.1\|509331_510159_-\|exodeoxyribonuclease-III	gnl\|CDD\|197321	cd09087, Ape1-like_AP-endo, Human Ape1-like subfamily of the ExoIII family apurinic/apyrimidinic (AP) endonucleases. This subfamily includes human Ape1 (also known as Apex, Hap1, or Ref-1) and related proteins. These are Escherichia coli exonuclease III (ExoIII)-like AP endonucleases and they belong to the large EEP (exonuclease/endonuclease/phosphatase) superfamily that contains functionally diverse enzymes that share a common catalytic mechanism of cleaving phosphodiester bonds. AP endonucleases participate in the DNA base excision repair (BER) pathway. AP sites are one of the most common lesions in cellular DNA. During BER, the damaged DNA is first recognized by DNA glycosylase. AP endonucleases then catalyze the hydrolytic cleavage of the phosphodiester bond 5' to the AP site, and this is followed by the coordinated actions of DNA polymerase, deoxyribose phosphatase, and DNA ligase. If left unrepaired, AP sites block DNA replication, and have both mutagenic and cytotoxic effects. AP endonucleases can carry out a variety of excision and incision reactions on DNA, including 3'-5' exonuclease, 3'-deoxyribose phosphodiesterase, 3'-phosphatase, and occasionally, nonspecific DNase activities. Different AP endonuclease enzymes catalyze the different reactions with different efficiences. Many organisms have two AP endonucleases, usually one is the dominant AP endonuclease, the other has weak AP endonuclease activity; for example, Ape1 and Ape2 in humans. Ape1 is found in this subfamily, it exhibits strong AP-endonuclease activity but shows weak 3'-5' exonuclease and 3'-phosphodiesterase activities. Class II AP endonucleases have been classified into two families, designated ExoIII and EndoIV, based on their homology to the Escherichia coli enzymes exonuclease III (ExoIII) and endonuclease IV (EndoIV). This subfamily belongs to the ExoIII family; the EndoIV family belongs to a different superfamily.	3.639e-114
NZ_CP046040.1\|WP_014622428.1\|498098_499226_+\|ABC-transporter-permease	gnl\|CDD\|378925	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein. This family is related to the ABC-2 membrane transporter family pfam01061.	4.55567e-15
NZ_CP046040.1\|WP_012515154.1\|507375_507930_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	0.00092299
NZ_CP046040.1\|WP_154293414.1\|502372_502663_-\|LPXTG-cell-wall-anchor-domain-containing-protein	gnl\|CDD\|380190	NF033186, internalin_K, class 1 internalin InlK. Internalins, as found in the intracellular human pathogen Listeria monocytogenes, are paralogous surface-anchored proteins with an N-terminal signal peptide, leucine-rich repeats, and a C-terminal LPXTG processing and cell surface anchoring site. Members of this family are internalin K (InlK), a virulence factor. See articles PMID:17764999. for a general discussion of internalins, and PMID:21829365, PMID:22082958, and PMID:23958637 for more information about internalin K.	5.17592e-09
NZ_CP046040.1\|WP_021320451.1\|495789_496461_+\|CPBP-family-intramembrane-metalloprotease	gnl\|CDD\|376806	pfam02517, Abi, CAAX protease self-immunity. Members of this family are probably proteases (after a isoprenyl group is attached to the Cys residue in the C-terminal CAAX motif of a protein to attach it to the membrane, the AAX tripeptide being removed by one of the CAAX prenyl proteases). The family contains the CAAX prenyl protease. The proteins contain a highly conserved Glu-Glu motif at the amino end of the alignment. The alignment also contains two histidine residues that may be involved in zinc binding. While they are involved in membrane anchoring of proteins in eukaryotes, little is known about their function in prokaryotes. In some known bacteriocin loci, Abi genes have been found downstream of bacteriocin structural genes where they are probably involved in self-immunity. Investigation of the bacteriocin-like loci in the Gram positive bacteria locus from Lactobacillus sakei 23K confirmed that the bacteriocin-like genes (sak23Kalphabeta) exhibited antimicrobial activity when expressed in a heterologous host and that the associated Abi gene (sak23Ki) conferred immunity against the cognate bacteriocin. Interestingly, the immunity genes from three similar systems conferred a high degree of cross-immunity against each other's bacteriocins, suggesting the recognition of a common receptor. Site-directed mutagenesis demonstrated that the conserved motifs constituting the putative proteolytic active site of the Abi proteins are essential for the immunity function of Sak23Ki - thus a new concept in self-immunity.	3.84459e-06
NZ_CP046040.1\|WP_014622437.1\|510511_515410_+\|S8-family-serine-peptidase	gnl\|CDD\|173801	cd07475, Peptidases_S8_C5a_Peptidase, Peptidase S8 family domain in Streptococcal C5a peptidases. Streptococcal C5a peptidase (SCP), is a highly specific protease and adhesin/invasin. The subtilisin-like protease domain is located at the N-terminus and contains a protease-associated domain inserted into a loop. There are three fibronectin type III (Fn) domains at the C-terminus. SCP binds to integrins with the help of Arg-Gly-Asp motifs which are thought to stabilize conformational changes required for substrate binding. Peptidases S8 or Subtilases are a serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.	1.41353e-76
NZ_CP046040.1\|WP_154293415.1\|502693_504562_-\|thioester-forming-surface-anchored-protein	gnl\|CDD\|237171	PRK12678, PRK12678, transcription termination factor Rho; Provisional.	2.16659e-21

>NZ_CP046040.1|WP_014622429.1|499222_500341_+|ABC-transporter-permease
MIPFIKALFIKIRRKKTSYITFILLPMLTTMLALSLSFTGGSQAKIGILDKDKSQVSKQFVSQLKHNKKYQIYTRLEEKAIDQYLKAKTLEAVLTIEPGFGEKVLKGDTQKLALRSIADSQITEWFKAQANYLLENYNIIGDAAAGNQEVFKKISAHNTKLSYKVKEITLADRSQSKSVSSTTTGFLLILMLGSTSVLYGGILLDKSSQIYNRLVLSRLSRLQYMLSYVCVGIVAFAIQIVIMLGLLRVANVSFYIPTAIVLLTFFLYSLLAIGFGLMIGAVSKNAQQSSQLANLIVMPTSMLAGCLWPLSITPPYMQAIGKLLPQHWVLTIISTFQNGGNLGEAWPYFLALFVAAMTLMVLASVLMKPLHR
>NZ_CP046040.1|WP_014622428.1|498098_499226_+|ABC-transporter-permease
MVLFHLIKKESLQIFRDRTALLMMVVFPILMILILSFAFKSSFNTAATVPKLTVRYQLEGKETEYQKNFITFLKLLNKELHLEAKETKDIAKAKQKVSEGALTAALEVKSDQNIEVTTNSINQQNADLINMLVNIYVDNAKTYDSIASLYPEAISNIKKRKIDYIASSSVQTSKGMSSADYYAISMFTMITFYSIMSAMNLVLSDRQQGVASRIYLTGVSNSAILLGKLIGGMLATAVQLTLLYVFTRFVLRVNWGTNDWQIIGVTASLVYLSVAIGIGLATGIRNQSFLTVASNAVIPIFAFLGGSYIPLSTLNSALINQLSNISPIKWVNDSLFYLIFGGQSNPIPVTLMVNLGIGTAFILFALVRMRKQVAA
>NZ_CP046040.1|WP_014622427.1|497166_498090_+|ABC-transporter-ATP-binding-protein
MSFVELKDVVKVYRGGKKAIDHVSLTIEEGRIYGLLGPNGAGKSTLINAILGLIPLNAGEVTVLQQSYKSIRKISSKIGYVPQDIAVYPDLTAYENVELFGSLYGLKGSELKEQVLKSLEFVGLKSQASQFPSQFSGGMKRRLNIACALVHSPKLIIFDEPTVGIDPQSRNHILESIRLLNEQGATVIYTTHYMEEVEALCDYIYIMDHGQVIEEGSQAELERRYESDFTKQIMVTVAADQAIDLSNKPNWRLMDNEHEAVLLIEHEDIGSVVRQLTDAHIAFSEIRHKHLNLEEIFLHLTGKKLRD
>NZ_CP046040.1|WP_014622426.1|496457_497144_+|hypothetical-protein
MIIILALLSFLILVTLFLTSHKRRRLVRWHLRHIRAMSYQQWLDLLLGLIQLGLVLVCLLFSDALALDGLLTFLGRVSFGWEIICYVLLYSIALVELTLLVLVLLFDLMLKKDSRLLLGKMTWLAFKSDRAAVSFLLLSLVTLVDAFCYLGLCLFLGKDSVAGLTIVVLGYALVKACRYSGWLQQLLAICLFGVIGVWCVTAALLYGWLIGLLLLTLTYLLISFKEQH
>NZ_CP046040.1|WP_021320451.1|495789_496461_+|CPBP-family-intramembrane-metalloprotease
MPLYTQCLNLCFLMATFCPSIAMQAIFGQGRDSYSFNLIGFLRAVLVYYALVLTGIYLLSPSIKAPLGHSDGRLLFIGFILSLAVLFIEVAFLHISRCWQKKEWLPLVLSFVGTTQKWPQIGYPLVLACCEEITYRLIWFNILWLQWRLPIALVLLITSLCYALNHFLMGRSIFYAKILTGLIYGSIYYVSQSLWLVLLVHVGGNLWVEGLSHLQSMHKKVVR
>NZ_CP046040.1|WP_014622424.1|494456_495815_+|Streptolysin-S-biosynthesis-protein-SagD
MLHYYPSFNHILDKLKGLSGNRTGILNQSQVPICNHPHDVYLKSVTGQMPDYHKQFIGELSQVSYHIIGYGSHYEEALIKYLGESIERYATVIAGELLSDRIVYASYRELSQTDPVMPLEYLQVFTQEQIDRCHDLHMIMCDKMVTQDDVLGWVKCPMFFEDKEMYVPAQMLCVGYKTNQAVGEKHIIPGFSTGTASHTTLEAAMCNSLIEYIQIDSMMLSWHTKKPCPKVIIDDPEILALLEEARLGKDSLYEIIPIDMTVGEDNPLYTFGIILKNKYKEGPYLLFGVQAGLDPKHTLLRGIMEASAISYSYYYNLFYNPTSTQNAESDSPLFLDLDSNVFYYAHPKDQELKWEAFEPLISGEVRLSDLTNHAGKDKKEDLKTLLAYTKKVSPNAVFLDITPPEASEKGWYVTRVLTPELLEMCIPAFPFANHPRMRQFGGVTNAFVHPMP
>NZ_CP046040.1|WP_014622423.1|493379_494444_+|Streptolysin-S-biosynthesis-protein
MKYQLNSNVRIVQFDDTFCFRKGLWDFNEAVLDIAQEPQALKEAYYSIISDWFNGKVIDTDTYEKTLESDLFAKLSEVITALYYNDLLMLEDAYALEENIMKVLTGNYHFIAESGQAKDTAPVLFISDSSYVNESAELLAKHLNLNLQVASDELKMLIQETDVTSRLDALEHHRNMKCLSEKLADYQSIVICQGRLNIMMLRHLNEISVALKKQLVLGFVDGPFIHACTLNPPHSADFDSLERRVLARLQDHTLYQRFASQQLPPTQPVSSSYVPLLNVLMNLVVSEAFIIAQTGSSKFEGRLLSVYLPTLEIQVQDILKMSNSQTQGALAKLRYEDQQISTREIVKKLLQEES
>NZ_CP046040.1|WP_014622422.1|492432_493383_+|SagB/ThcOx-family-dehydrogenase
MPFFSKEKQRSDNQSDLTREEARQLFEFNTNHLSLSTYHHQTVLKTSKQLVAQHLMPDETDNLSQRFLMNYKVNNNYLGFKTSVAEFFTDSAVTTFSNSDYFEDRANTIALPKAKKVSAALSTCITNRRSHRQFIDEKMPLQDLADLLYYACGVSSQAIIKEGMTKTVALRNCASGGGLYPITLFFYARNVETLKDGFYEYLPYQHALRCHHLSDQEDIRAFAEYGPITAENCNVILIYVYQYIKNTRKYGNQATAYAFIEAGEIAQNVQLVSTALVYGSVDIGGYNKEYLQEKLGLDGLTQHVIHMTIIGNKESQ
>NZ_CP046040.1|WP_012678394.1|492040_492205_+|streptolysin-S-family-bacteriocin
MLQFTSNILATSVAETTQVAPGGCCCCCSCCCCVSASWGNTTINNNYGAAEPKA
>NZ_CP046040.1|WP_012515137.1|491254_491512_+|DUF896-family-protein
MDPKKIARINELAKKKKTVGLTGPEKVEQAKLREEYIEGYRRSVRHHIEGIKIVDEDGNDVTPEKLRQVQREKGLHGRSLDDPES
>NZ_CP046040.1|WP_154293414.1|502372_502663_-|LPXTG-cell-wall-anchor-domain-containing-protein
MPQPMPDPTPKPMDPKPESKPEPKPTPQPETKPQPKPAPQSEAKPQKPTKPSTITSQSSGKSLPKTNDTGSLSTVLGTGLLSLLGLGFLTRRKRKQ
>NZ_CP046040.1|WP_154293415.1|502693_504562_-|thioester-forming-surface-anchored-protein
MRKTMKKMLAASTLCIIMSGSFISGSARVLAEQYYGYDDGTQKGGSDPAFLYVSPKDNPNMSAIVYCFNKENTPPNPWEKHIWKKPEELQYPLPLYNKYSGTDNLFESNASTKLRKKEVTNITATLVAVLSHGYPHGKSHFCSEYCRDENKARKVTQLALWYFTDGIDENTLKTNYSLSEDDMKGLQYLIKVGKEAKVGSGQTLDFYIAQENSSVNRKYQNLLGSTPILKPETPNNHCQCTKIYIKDDGENGYWLYVYYDTNGNNIHDNNEHILQQKYIKNGKDGKQGRIGFPGLPGPKGPKGDRGEKGDRGETGPRGERGPAGEPGKPGPKGDTGPQGPRGDKGETGEKGPQGNPGKDGKPGERGERGPKGDTGPQGPRGDKGETGERGKDGEPGVPGPQGKPGRDGKDGEKGERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQGERGQGPQGERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPQGERGEQGPRGENPTPTPEPMPQPMPDPTPKPMDPKPQGT
>NZ_CP046040.1|WP_014622433.1|504976_506062_-|hypothetical-protein
MMTRYFYKLLLTILILALGGFSLSACHSKISKPYQVAIFDKDHVRTFMEKADSLVPVETVSRTQHKLFERESFKQANQGYFAKTREGNDLKILLTHIDQASLEEKVLHADGNDAYTSTTDGDYFYTTAVFADRIDCYKYDCHLKKQAHKSIPNRDTINASNQFLVIDDALYLLVSAVDIKSQQPKTELWKMDKSFTITDRIDLDESTAYLRMVNVGRTLYITQAADGILETGEPRPGNKVMTYDLDSGQKSYLMLHVNSPRAIYHHAKTNELIIENDQHYNPDFAWTIYQLDTGEERTIRFEELAGQETSSPYFMMTSSSYYFLFPKKLYRYDCSSHQMTCINLDQYGVTHAHAMIAKPTP
>NZ_CP046040.1|WP_014622434.1|506535_507165_-|hypothetical-protein
MIKEFCAENLTMLSQLTSQSVSRVELCDNLAVGGTTPSYGVIKEACDLLHDKQISVATMIRPRGGNFVYNDIELRAMEADILKAIEAGTDALVMGLLTKDNQLDTDAIEQLLPATQGLPLVFHMAFDLIARDQQIASLEQLIDYGFVRILLHGSSDTRSIYENIDHIKQLVKAAQHRIEIMIGGGVTADNCQELSQLTGTAIVHGTKII
>NZ_CP046040.1|WP_012515154.1|507375_507930_+|GNAT-family-N-acetyltransferase
MEIRLAFPNELSQIMTVINSAKSALAQSGSSQWQKADGYPAYQDIAADVLQGQGYVALLEGQIVAYAAVIDGQEDAYDKIYDGRWQHNHHRYVTFHRVAVLSDRTGQGIAQTFLQGLIEGQHGPDFRIDTHEHNQVMRHIIEKLGFVYCGKVPIDGERLAYQKIKKSHERAAYQEISEDSRYSY
>NZ_CP046040.1|WP_012679132.1|508386_508899_+|methylated-DNA--[protein]-cysteine-S-methyltransferase
MWGGQILPLYECVYQSPLGKISLVATDVALIGAWFEGQRYFQAGIKVQPIWQEQHALLKRACLWLDAYFERKPYPMLDCLSPQGTDFQRAVWRELQTIRWGETLSYGELAKRLQCRSAQAVGGAIGRNPLSIFIPCHRVLAADGRLIGYAGGLEKKAWLLRHEQISVNKE
>NZ_CP046040.1|WP_014622436.1|508902_509256_+|arsenate-reductase-family-protein
MITIYQYPKCSTCQKALAELKTLVSEVDVIDIKANPPKAEQLKQWLEHSDYSLKSFFNTSGMRYRELGLKDKVNSLSIEEAAELLATDGMLIKRPILLQDNQVLQVGYRTAYKDLGL
>NZ_CP046040.1|WP_012515158.1|509331_510159_-|exodeoxyribonuclease-III
MKLISWNIDSLNAALTGESPRALLSRAVLDTLVAQDADIIAIQETKLSAKGPTKKHLESLLGYFPNHLNVWRSSVEPARKGYAGTMFLYKKELNPIVTFPDIGAPTTMDAEGRIITLEFDDFFVTQVYTPNAGDGLRRLEERQLWDQKYADYLAQLDAQKPVLATGDYNVAHKEIDLANPASNHRSPGFTDEERLGFTNLLNRGFTDTFRFIHGDIPNVYSWWAQRSKTSKLNNTGWRIDYWLTSNRLIDKVSRSEMISSGERQDHTPILLEIDL
>NZ_CP046040.1|WP_014622437.1|510511_515410_+|S8-family-serine-peptidase
MEKKERFSLRKYKSGMVSVLIGILFLTGMGSVAAEEQGVSSAHVSAEQHQESREVLSVSQTSEGIAVNAQDIDSQSSKAEAKTEEATEPGLVPSEMEALTQTNQSVKQQEESRELPPVNMDTHRWIKTEGAWNRGYKGQGKVIAVIDTGIDASHHAMRITNPAAAKFTSKADIDQRKKAAGIQYGVWLSDKVVFAHNYVENNDKVKEIKDDPFEGLGDLDFDIIVQHIANKRPQSIEAPQETVIKLDDTSGGTIIDWQDTDDDSKYESHGMHVTGIAAGNGLKAVAAGERFLGIAPEAQVMFMRVFTHDLMGTGDPLFIKAIEDAVALGADVINLSLGSANGSQLNGNRALMAAIEKARQAGVSVVVAAGNERAFGSDHADPLATNPDYGLVGAPSAGRTPTSVASINNKVIIERLMTVEGLKDRADLNHGKAIYLESVDFKDIKTSLGFDVPYSFVYVKALTKEGYQEREVSGKIVLVQRDPNRKYDDIIAEAKQYGAAGVLIFNNEPGKANRTMRLSSKGMVLPSAFISHEFGMAMAALNGNGTGTLTFDAEVSKAISQKGNEMNYFSNWGLTSDGYLKPDITAPGGDIYSTFNDDHYGSQSGTSMATPHIAGASLLVKQYLEALQPQLAKDKLADLVKNILMSNAQIHINPKTNTTTSPRQQGAGLLNIEAAVTSGLYLTGKDNYGSISLGNVTDQISFEVTIHNLSNQAKSLRYQTELLTDQVDTKEGRFALRSRSLKTYQGEQVDVPAQGHKTITITLDASSFTEELSKQMPNGYYLEGFVRFVDSKDEHKDNINIPFVGFRGAFENLPVVEASIYELKAQGKTGFYFDQSGLKDEIYVGNHFTGLVTVGTDTNVSMTTIADNGLHTLGTFSNKDGKFVLERNAAGYPVLAISPNGDNNQDFAAFKGVFLRKYQGLQASVYKATDTDRKELLWISLSALQGDKNFNSDIRFAKSTTLLETGFSGKSLTGADLPDGKYHYVVSYYPDVVGAKRQEMVFEVIVDRQKPELGTASYNPVTHRFRPSQWLDRGQAGVLRDSVFYLETKDDKPYTITINDSLKYVTVSDNKQFVERLADGSFVLPVDQVALGDFYYMVEDFAGNVAIAKLGNHLPEKIGQAELALTLTDIDAQHQLSYSDDLNMTAADTGLVTNEAELLIISRNRPQSRLAKLGQTAVISPNDDGNKDFVAFKGLPHQVYQDLKVTVFAQEDTAMTSPIWSSQPGASVANVDSTAWYGTRASGARVMAGHYRYVVSYLDANGMPQAETYGVTVSHQKPVITPASFQADGATEVFRPGPSKGQSPIGIVREEVFYLVKKDGRKFDLTVEDQLIRFKDNKVMIAQNADGTYTIPKVEGVAEADYYYLVEDEAGQIAYMSLAALRAVGPDKGVVSVALALDVLENKKEPAFTYLIRDEQGKPIEQLDYFNSSANSLILPFGRYTVELLAYDNHLFELRSDNLVSFSLDADTRLASVAFEMTRPIVASVWLLFNQVLPEGSKVSLKAANGQLISLAPSLYVPSAYGKTLRQGSYEVLVELPEGYQLIGQGGLEVSHNGVIELTFEVIKAKQPQLEHQARGLTHYTGSSITSSALTAQAVKKAQVLPSTGEQAAVNLVLLGLLSLGAAGSCQRQRKY
>NZ_CP046040.1|WP_014622438.1|515584_517264_+|hypothetical-protein
MTKKVASLVLIGLDSLILAGFYWIYLPPMNVMSLEFWFFVILALILAMVSLFILSLFGLKKTVTSFFTQKSGRKDVTSGLSLKQLTGGIKWLGLALAVIIAGLSLMLAVNTRMFRAKSYAHVIKVKDADFNKDFPDTDLSALALLDRDSAEKIGDTYLGTIDKVSQFGISDEYRQITIGKLPYRVSPLEYKSFWKWLTNRKDGIGYYVKVNQTTGKAELVKLKQPMKYSHSEFMFRDTMRHLRFQYPMTIFSDPSFEVDDDGNPYYVATTYAPKFGLSSQEPTGVILLDAVSGKSQYYELKDVPKWVDRVYSADNVLERVNDYYTYQKGYWNTVFSQTDVKQTTDSYNYITIGSDIYLYTGITSATADSSNLGFILVNMRTREVTNYKLPSATEASAMKSAEGEVQEKKYTATAPTLVKLNDKAYYLISLKDGAGLIKSYALVDAEDYQQVTVNNDIQTLISQFTDKDISSLSVSDTSDQKVKMITGQVEQLASQIISGTTVYYISSKGQIYKIKASSETSDRLPFLKVGDQFKAQLADDNYLNHMTIESSSADQALTE

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Crispr_ID: NZ_CP046040_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046040_2

563488-564773

TypeI

I-C

Consensus_repeat	Method
GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT	PILER-CR
GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT	CRISPRCasFinder
GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT	CRT

19 spacers

cas2,cas1,cas4,cas7,cas8c,cas5,cas3

The CRISPR arrays of NZ_CP046040_2

>merge|NZ_CP046040|2|563488-564773|PILER-CR,CRISPRCasFinder,CRT
GTCTCGCCTTTCATGGGCGAGTGGATTGAAATGTACAAAATAGTGTGTTAATATAGTATCATAGCGTCTCGCCTTTCATGGGCGAGTGGATTGAAATCAGAGATTGATATCCAAAAAACAAAATCCAATGGTCTCGCCTTTCATGGGCGAGTGGATTGAAATCTACCAAGATATTTGTAACAATCTTGGAATGGATTGTCTCGCCTTTCATGGGCGAGTGGATTGAAATCTGAAGCAATAGCTAACAATCCCGCTTTACAATTGTCTCGCCTTTCATGGGCGAGTGGATTGAAATAAGCTTTTATATGGCTGATAAACTGCTTGGAAAGTCTCGCCTTTCATGGGCGAGTGGATTGAAATAAGGTATTGAGGAAAAAATTGCCACTGGCAAAAAAGTCTCGCCTTTCATGGGCGAGTGGATTGAAATATTGCTAACACTAGTAAAATTACCTCGTAGTGTCGTCTCGCCTTTCATGGGCGAGTGGATTGAAATATGGTTAATGTCCAAAAATTAAAAGGTGTGATTGGTCTCGCCTTTCATGGGCGAGTGGATTGAAATAAATCAAGGGTTGAAAACTTTGTAATTTTTGGCATGTCTCGCCTTTCATGGGCGAGTGGATTGAAATCATTGAATCGCCAGCTACTTTTGCAATAGTATCAGTCTCGCCTTTCATGGGCGAGTGGATTGAAATCATTGAATCGCCAGCTACTTTTGCAATAGTATCAGTCTCGCCTTTCATGGGCGAGTGGATTGAAATAGCTTTTAATAAGTTGTCAAGACTAACAGTACCATGTCTCGCCTTTCATGGGCGAGTGGATTGAAATACTAAAATATGCAAAATAATGAATAAAAAGGAGAGGTCTCGCCTTTCATGGGCGAGTGGATTGAAATAAAGGAAGATGAGTACTTGGCTAGACGACTTAAGTCTCGCCTTTCATGGGCGAGTGGATTGAAATCTAAAGAGGTGACGGAATGAATAAAAGCGAAATGTCTCGCCTTTCATGGGCGAGTGGATTGAAATTCAGAAACAAATAGCTGAACAAATGAAGATTTCCGTCTCGCCTTTCATGGGCGAGTGGATTGAAATGTGTATCGCAGACATGCATTGCCTTGCGTTTCGGTCTCGCCTTTCATGGGCGAGTGGATTGAAATTGCGAGATTAACTTACTGCACATGGATTTTATCGTCTCGCCCTTTGCGGGCGAGTGGATTGAAATCTAAAAGACTTTCTGATTTTAACCAACCCTGACAACGTCTCGCCCCATACGGGCGAGTGGATTGAAAT

>NZ_CP046040|2|1|563488-564575|PILER-CR
GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT	GTACAAAATAGTGTGTTAATATAGTATCATAGC
GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT	CAGAGATTGATATCCAAAAAACAAAATCCAATG
GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT	CTACCAAGATATTTGTAACAATCTTGGAATGGATT
GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT	CTGAAGCAATAGCTAACAATCCCGCTTTACAATT
GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT	AAGCTTTTATATGGCTGATAAACTGCTTGGAAA
GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT	AAGGTATTGAGGAAAAAATTGCCACTGGCAAAAAA
GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT	ATTGCTAACACTAGTAAAATTACCTCGTAGTGTC
GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT	ATGGTTAATGTCCAAAAATTAAAAGGTGTGATTG
GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT	AAATCAAGGGTTGAAAACTTTGTAATTTTTGGCAT
GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT	CATTGAATCGCCAGCTACTTTTGCAATAGTATCA
GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT	CATTGAATCGCCAGCTACTTTTGCAATAGTATCA
GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT	AGCTTTTAATAAGTTGTCAAGACTAACAGTACCAT
GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT	ACTAAAATATGCAAAATAATGAATAAAAAGGAGAG
GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT	AAAGGAAGATGAGTACTTGGCTAGACGACTTAA
GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT	CTAAAGAGGTGACGGAATGAATAAAAGCGAAAT
GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT	TCAGAAACAAATAGCTGAACAAATGAAGATTTCC
GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT

>NZ_CP046040|2|1|563488-564773|CRISPRCasFinder
GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT	GTACAAAATAGTGTGTTAATATAGTATCATAGC
GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT	CAGAGATTGATATCCAAAAAACAAAATCCAATG
GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT	CTACCAAGATATTTGTAACAATCTTGGAATGGATT
GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT	CTGAAGCAATAGCTAACAATCCCGCTTTACAATT
GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT	AAGCTTTTATATGGCTGATAAACTGCTTGGAAA
GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT	AAGGTATTGAGGAAAAAATTGCCACTGGCAAAAAA
GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT	ATTGCTAACACTAGTAAAATTACCTCGTAGTGTC
GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT	ATGGTTAATGTCCAAAAATTAAAAGGTGTGATTG
GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT	AAATCAAGGGTTGAAAACTTTGTAATTTTTGGCAT
GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT	CATTGAATCGCCAGCTACTTTTGCAATAGTATCA
GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT	CATTGAATCGCCAGCTACTTTTGCAATAGTATCA
GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT	AGCTTTTAATAAGTTGTCAAGACTAACAGTACCAT
GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT	ACTAAAATATGCAAAATAATGAATAAAAAGGAGAG
GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT	AAAGGAAGATGAGTACTTGGCTAGACGACTTAA
GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT	CTAAAGAGGTGACGGAATGAATAAAAGCGAAAT
GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT	TCAGAAACAAATAGCTGAACAAATGAAGATTTCC
GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT	GTGTATCGCAGACATGCATTGCCTTGCGTTTCG
GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT	TGCGAGATTAACTTACTGCACATGGATTTTATC
GTCTCGCCCTTTGCGGGCGAGTGGATTGAAAT	CTAAAAGACTTTCTGATTTTAACCAACCCTGACAAC
GTCTCGCCCCATACGGGCGAGTGGATTGAAAT

>NZ_CP046040|2|2|563488-564773|CRT
GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT	GTACAAAATAGTGTGTTAATATAGTATCATAGC
GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT	CAGAGATTGATATCCAAAAAACAAAATCCAATG
GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT	CTACCAAGATATTTGTAACAATCTTGGAATGGATT
GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT	CTGAAGCAATAGCTAACAATCCCGCTTTACAATT
GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT	AAGCTTTTATATGGCTGATAAACTGCTTGGAAA
GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT	AAGGTATTGAGGAAAAAATTGCCACTGGCAAAAAA
GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT	ATTGCTAACACTAGTAAAATTACCTCGTAGTGTC
GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT	ATGGTTAATGTCCAAAAATTAAAAGGTGTGATTG
GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT	AAATCAAGGGTTGAAAACTTTGTAATTTTTGGCAT
GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT	CATTGAATCGCCAGCTACTTTTGCAATAGTATCA
GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT	CATTGAATCGCCAGCTACTTTTGCAATAGTATCA
GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT	AGCTTTTAATAAGTTGTCAAGACTAACAGTACCAT
GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT	ACTAAAATATGCAAAATAATGAATAAAAAGGAGAG
GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT	AAAGGAAGATGAGTACTTGGCTAGACGACTTAA
GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT	CTAAAGAGGTGACGGAATGAATAAAAGCGAAAT
GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT	TCAGAAACAAATAGCTGAACAAATGAAGATTTCC
GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT	GTGTATCGCAGACATGCATTGCCTTGCGTTTCG
GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT	TGCGAGATTAACTTACTGCACATGGATTTTATC
GTCTCGCCCTTTGCGGGCGAGTGGATTGAAAT	CTAAAAGACTTTCTGATTTTAACCAACCCTGACAAC
GTCTCGCCCCATACGGGCGAGTGGATTGAAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046040.1\|WP_014622466.1\|552703_553120_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046040.1\|WP_014622468.1\|553768_554089_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|373960
NZ_CP046040.1\|WP_014622467.1\|553349_553769_+\|TNT-domain-containing-protein	unknown	unknown	gnl\|CDD\|379424
NZ_CP046040.1\|WP_038674466.1\|566935_567586_+\|TlpA-family-protein-disulfide-reductase	unknown	unknown	gnl\|CDD\|239264
NZ_CP046040.1\|WP_014622475.1\|562010_563036_+\|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
NZ_CP046040.1\|WP_014622474.1\|561342_562014_+\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|224385
NZ_CP046040.1\|WP_012679147.1\|567603_568716_+\|peptide-methionine-(R)-S-oxide-reductase-MsrB	unknown	unknown	gnl\|CDD\|184456
NZ_CP046040.1\|WP_014622483.1\|571478_572567_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225197
NZ_CP046040.1\|WP_014622484.1\|572581_573286_+\|B3/4-domain-containing-protein	unknown	unknown	gnl\|CDD\|225917
NZ_CP046040.1\|WP_014622482.1\|569720_571439_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225519
NZ_CP046040.1\|WP_038674462.1\|573522_574011_+\|prolyl-tRNA-synthetase-associated-domain-containing-protein	unknown	unknown	gnl\|CDD\|239827
NZ_CP046040.1\|WP_014622486.1\|575268_575949_+\|Crp/Fnr-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223736
NZ_CP046040.1\|WP_012515211.1\|574654_575128_-\|arginine-repressor	unknown	unknown	gnl\|CDD\|224355
NZ_CP046040.1\|WP_014622471.1\|557889_558609_+\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	gnl\|CDD\|273847
NZ_CP046040.1\|WP_014622472.1\|558608_560492_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	cd09642_cas8c_CAS-I-C	gnl\|CDD\|187773
NZ_CP046040.1\|WP_014622473.1\|560492_561341_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	COG3649_cas7_CAS-I-C	gnl\|CDD\|187820
NZ_CP046040.1\|WP_014622479.1\|566211_566922_+\|thiol-disulfide-oxidoreductase-associated-membrane-protein-CcdA2	unknown	unknown	gnl\|CDD\|223856
NZ_CP046040.1\|WP_014622476.1\|563046_563340_+\|CRISPR-associated-endonuclease-Cas2	cas2	COG1343_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|187856
NZ_CP046040.1\|WP_014622481.1\|568983_569724_+\|response-regulator	unknown	unknown	gnl\|CDD\|227095
NZ_CP046040.1\|WP_014622469.1\|554679_557133_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124

Protein	Function_ID	Function_description	E-value
NZ_CP046040.1\|WP_014622468.1\|553768_554089_+\|hypothetical-protein	gnl\|CDD\|373960	pfam15597, Imm59, Immunity protein 59. A predicted immunity protein with an alpha+beta fold and a conserved [DE]R motif. Proteins containing this domain are present in bacterial polymorphic toxin systems as an immediate gene neighbor of the toxin gene, which usually contains toxin domains of the Ntox13 or Ntox40 families. In some proteins this domain is fused to the Imm38, pfam15599 immunity domain.	5.46556e-37
NZ_CP046040.1\|WP_014622467.1\|553349_553769_+\|TNT-domain-containing-protein	gnl\|CDD\|379424	pfam14021, TNT, Tuberculosis necrotizing toxin. This is the C-terminal domain secreted by Mycobacterium tuberculosis (Mtb). It induces necrosis of infected cells to evade immune responses. Mtb utilizes the protein CpnT to kill human macrophages by secreting its C-terminal domain (CTD), named tuberculosis necrotizing toxin (TNT) that induces necrosis. It acts as a NAD+ glycohydrolase which hydrolyzes the essential cellular coenzyme NAD+ in the cytosol of infected macrophages resulting in necrotic cell death. CpnT transports its toxic CTD from the cell surface of M. tuberculosis by proteolytic cleavage, where the toxin is cleaved to induce host cell death. Structural analysis determined that the TNT core contains only six beta-strands as opposed to seven found in all known NAD+-utilizing toxins, and is significantly smaller, with only two short alpha-helices and two 3/10 helices. Furthermore, the putative NAD+ binding pocket identified Q822, Y765 and R757 as residues possibly involved in NAD+-binding and hydrolysis based on similar positions of catalytic amino acids of ADP-ribosylating toxins. While glutamine 822 residue was detected to be highly conserved among TNT homologs.	2.04776e-16
NZ_CP046040.1\|WP_038674466.1\|566935_567586_+\|TlpA-family-protein-disulfide-reductase	gnl\|CDD\|239264	cd02966, TlpA_like_family, TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.	6.60058e-35
NZ_CP046040.1\|WP_014622474.1\|561342_562014_+\|CRISPR-associated-protein-Cas4	gnl\|CDD\|224385	COG1468, COG1468, CRISPR-associated protein Cas4 (RecB family exonuclease) [Defense mechanisms].	3.81407e-28
NZ_CP046040.1\|WP_012679147.1\|567603_568716_+\|peptide-methionine-(R)-S-oxide-reductase-MsrB	gnl\|CDD\|184456	PRK14018, PRK14018, bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB.	5.09976e-165
NZ_CP046040.1\|WP_014622483.1\|571478_572567_+\|hypothetical-protein	gnl\|CDD\|225197	COG2315, MmcQ, Uncharacterized protein conserved in bacteria [Function unknown].	1.40835e-23
NZ_CP046040.1\|WP_014622484.1\|572581_573286_+\|B3/4-domain-containing-protein	gnl\|CDD\|225917	COG3382, COG3382, Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta [General function prediction only].	1.20864e-91
NZ_CP046040.1\|WP_014622482.1\|569720_571439_+\|sensor-histidine-kinase	gnl\|CDD\|225519	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].	6.38139e-64
NZ_CP046040.1\|WP_038674462.1\|573522_574011_+\|prolyl-tRNA-synthetase-associated-domain-containing-protein	gnl\|CDD\|239827	cd04335, PrdX_deacylase, This CD includes bacterial (Agrobacterium tumefaciens and Caulobacter crescentus ProX, and Clostridium sticklandii PrdX) and eukaryotic (Plasmodium falciparum N-terminal ProRS editing domain) sequences. The C. sticklandii PrdX protein, a homolog of the YbaK and ProX proteins, and the prolyl-tRNA synthetase-editing domain (ProRS-INS), specifically hydrolyzes Ala-tRNA(Pro). In this CD, many of the eukaryotic editing domains are N-terminal and cis-acting, expressed from a multidomain ProRS, however, similar to the bacterial PrdX, the mammalian, amphibian, and echinoderm PrdX-like proteins are trans-acting, single-domain proteins.	1.71569e-59
NZ_CP046040.1\|WP_014622486.1\|575268_575949_+\|Crp/Fnr-family-transcriptional-regulator	gnl\|CDD\|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	1.56348e-40
NZ_CP046040.1\|WP_012515211.1\|574654_575128_-\|arginine-repressor	gnl\|CDD\|224355	COG1438, ArgR, Arginine repressor [Transcription].	8.79004e-63
NZ_CP046040.1\|WP_014622471.1\|557889_558609_+\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|273847	TIGR01876, cas_Cas5d, CRISPR-associated protein Cas5, subtype I-C/DVULG. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This small Cas family is represented by CT1134 of Chlorobium tepidum. This family belongs to a set of several Cas protein families, one each for a number of different CRISPR/Cas subtypes, that share a region of N-terminal sequence similarity modeled by TIGR02593. This family represents the Dvulg subtype of CRISPR/Cas locus.	3.90222e-95
NZ_CP046040.1\|WP_014622472.1\|558608_560492_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|187773	cd09642, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; signature gene for I-C subtype; also known as Csd1 family.	1.04746e-115
NZ_CP046040.1\|WP_014622473.1\|560492_561341_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|187820	cd09689, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas7 is a RAMP superfamily protein; Subunit of the Cascade complex; also known as Csd2 family.	3.50306e-136
NZ_CP046040.1\|WP_014622479.1\|566211_566922_+\|thiol-disulfide-oxidoreductase-associated-membrane-protein-CcdA2	gnl\|CDD\|223856	COG0785, CcdA, Cytochrome c biogenesis protein [Posttranslational modification, protein turnover, chaperones].	8.62107e-42
NZ_CP046040.1\|WP_014622475.1\|562010_563036_+\|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	0
NZ_CP046040.1\|WP_014622476.1\|563046_563340_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	5.51767e-31
NZ_CP046040.1\|WP_014622481.1\|568983_569724_+\|response-regulator	gnl\|CDD\|227095	COG4753, COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms].	1.72654e-78
NZ_CP046040.1\|WP_014622469.1\|554679_557133_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	1.40821e-80

>NZ_CP046040.1|WP_014622476.1|563046_563340_+|CRISPR-associated-endonuclease-Cas2
MMVLVTYDVNTETASGRKRLRQVAKLCVDYGQRVQHSVFECSVTPAEFVEIKHKLTTIIDMEMDSIRFYLLGKHWQNRVETLGRSDSYDPDIGVLLL
>NZ_CP046040.1|WP_014622475.1|562010_563036_+|type-I-C-CRISPR-associated-endonuclease-Cas1
MKKLLNTLYLTQEDYYITKEGDNIVIKQDGKTVSRFPFRIIDGVVCFSYLGASPALIKLCTENQINLSFHTPQGRFCGRYVGATNGNVLLRREHYRLADRDESLEYAKRFILAKISNARKYLLRFRRDHREQIDTKLFEVVNSELIWALEMVQATDNKDSLRGIEGQAANQYFRIFNDLVLTDKKAFTFGGRSKRPPLDRVNALLSFGYSLLTFECQSALEAVGLDSYVGFFHTDRPGRASLALDLVEEFRSYIVDRFVFSLINKGQLTKKHFDVKENGSILLTEKGRVTFIELWQKRKHMEVEHPFTKEKVKLMLLPYVQAQLLAKAIRGDIDSYPPFMI
>NZ_CP046040.1|WP_014622474.1|561342_562014_+|CRISPR-associated-protein-Cas4
MVYVEDDYLMLSGIQHFQFCKRQWALIHIDQQWADNEATVHGQILHTRADNPYIKEKRKDFFLSYAMHISSACLGLYGIMDVVEFHKDDSGVTVKGKRGRWLPRVVEYKRGKPKKDRRDIVQLVAQTMCLEETLNCQIAEGSLYYHSVNKKVQIAIKDELRREVQELANQMHRFYGAKELPKAEYFKNCQLCSLVEVCKPRISKKVRNVDRYIAAAMVSEEII
>NZ_CP046040.1|WP_014622473.1|560492_561341_+|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MLEHKIDFMVTVEVKEANANGDPLSGNMPRTDAKGYGLMSDVSIKRKIRNRLQDMGQSIFVQANERIEDEFRSLENRFSAQFDKNDKDDDIERRANELWLDVRSFGQVFTYLKKSIGVRGPVSISMAKSLEPVVISSLQITRSTNGMEPKGDSSRSSDTMGTKHFVDYGIYVIKGSINAHFAEKTGFSEEDADIIKQALVSLFENDASSARPEGSMRVREVFWFTHSSKLGNVSSARVFDLLVFDMETPDKDRYEAYGIHLDEEKLAAYQAKGLTVEVLEGL
>NZ_CP046040.1|WP_014622472.1|558608_560492_+|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MDFFASLLRAYEHAEDIGLVDNQEQSGTILLPIYHTNRRSNGKDTIVVQLDKTGQFMKAEYLADGETIIFPVTAESVARSGKNPAPHPLVDKLTYFVSEHNQEQYESYHQQLKGWISACQDKQVMSYLSLIQQFILKEDFLDLICQSLFGKQLSRNGLKVTYALSAEKEKTVDLSACFLTFQIAQFIGFKTVSVTNFTALHKDYIAYLMSKQTANMICNISGQKEVLATKHRGLLGNAKLISVSNHAEAYKGRFRERDDVFRVGNQTSEKLHLMAKYFLEHEQTHVWLGSGQHMINWFSDDLANDSQLNITQALLLDPFDDEETFLSTPMISEENKSINRSFITGQRQFSDSASYYIAILNKTNDGRIALKYFRQLQASSLLKNLAVWQENYSWELQRKGNQFVQKLPSFKEIILAAYGVDRDRSLELDHDNFRSDQYQRLVTSLIDGKPLPDTIVKKLEANIKQRQKYRKHWHQVEHISLAILHKQNGEEFTPMLDRDNTNRSYLFGRLLGIYELIEKSRNNSKGRAKDELKRITNAERYWTAYANRPASLMRNLEDKIYPYSEYLKINEAGLWSKLEKEREEIIALLTSSLETTDFNKPLDYRFIFGYYAEKKYFYTPKDESEDA
>NZ_CP046040.1|WP_014622471.1|557889_558609_+|type-I-C-CRISPR-associated-protein-Cas5
MRVRGDIALFTNPATKGSSERSSYSVPTRQALQGIVDAVYHKPTITNVVTEVKVINQIQTELHGTRALLKDYGADLSYVSYLSDVEYLIKYHFVWNENRPDLAKDRLPSKHEAIMERSLRKGGRRDVFLGTRECLGLVEAISQQEYEAAQVASEHANQEIDLGIMFHSFAYPTDKKEPLRSYFTRTVMTNGRIRFKEQAECEIMNTLSSYTFKAAGPIKPVEEEFEGYQLDTIRETGGQ
>NZ_CP046040.1|WP_014622469.1|554679_557133_+|CRISPR-associated-helicase/endonuclease-Cas3
MILAHYQGKTDLEPAKEQSLEEHSFQVAELARTAATSIKQGDLVFLLGLFHDLGKAEYRFQEKLLKKPNSHVDHAYAGARYLYDEIGRVLSDYIRQYPDHKPLVLYFRDIISYVISAHHGMYDLRMTEPAEEASRFAYNKLLHRMFQERPDYHYQKDVLTFVEVLEQSLPRYGYDHLADLITRAFYNFQLAWDKLDMADTSEQDYYSGCFVRLYLSLLKNADVLDTINAYETVIEPLTEEKQEELRISYLEAVESLYASLGQSRLRLNAIRNKLAERVKGRGREDSTGIYRLNLPTGAGKTNLSLRYATHQMVYQQKKHFFYVTPFLSVLEQNALAMKQVIGEEGVLEHHSNVVREIDNANQNNDDTDEDRDSLQREYLIDSWDSPVVLTSMVQFFQTLFKTRSAHLRRFSSLMDSVVILDEVQSLPIEVTTLFNLTMTFLSRVMQTTLVLCTATQPAYDSESITHTLTYGGSKAEEADIVTVTDEEQLAFTRTELCKLSDSDEKTSLVELAHTILEQEMSTLVILNTKPAVERLYQLLRDQTERPLYQLSTNMCPKHRLDVIAEIKSRLPNNVPLICVSTQLIEAGVDIDFERVIRSYAGIDSIVQAAGRCNREGRRPIGQVLLVNLTDDEENLSHLKEIKHKKDATETILYQKTSPIDAVALNDAFFNCYYENNKHRLDYPLGDNETIYQYLSSNAPSNIKKGKLRQAFKTAGQKMDLIQDRSIGVLVFYDDRVGRERLEALEEQLLKSSYPNNEELKAIKAELKALQPYTITLRDNHELLKATRSYLSGQILILQEHYYHQTFGLTKEADSFIL
>NZ_CP046040.1|WP_014622468.1|553768_554089_+|hypothetical-protein
MSHLDKQSKELLSEIQAMGYESLRYSIFNDHRPSEWETRIEFDPKSEEYEVYSTMDRASITGVYRFSRFEDAKIRFFRNLDLTVFRYKQLVKEGRSTPYSSPLWND
>NZ_CP046040.1|WP_014622467.1|553349_553769_+|TNT-domain-containing-protein
MVDNLGNPITEQVTLKAGQIIDRYGSSSGRFTSPIENGVTLPFNKRGLPYPEGYQNYHQYRILKDISVENVKEGFSKLSITDKQLLMADMEEFRFSFDDLANPQKGQIAKVFGQGGGTQIKMITSISWFEKLGLLREVK
>NZ_CP046040.1|WP_014622466.1|552703_553120_+|hypothetical-protein
MNKEQYLPVKESLGYKNVKQALWTIFSVNLDEIPIHEGEDENFNFVFTYKNCEMMMGIYDTGKNIQFQAGEGGLFSVSLPNPKYPKQSFQKIVSLSYLISDKNVSENIRWCLGLDLKSVEYAMRVLKDYLDQKCEEEQ
>NZ_CP046040.1|WP_014622479.1|566211_566922_+|thiol-disulfide-oxidoreductase-associated-membrane-protein-CcdA2
MELTMLLMVSVFIAGLLSFFSPCIFPVLPVYLGILLDSDDSRSITIFGKKLYWYGIVKTLAFISGLSTIFIILGYGAGLLGNILYAAWFRYLLGAFVILLGIHQMEIVTIKKLQFQKSVAFQNKKDRNAVLNAFLLGITFSFGWTPCVGPVLSSVLALAASGGSGAWQGGFLMIIYTLGLGLPFLLLSFASGIVLKHFNKLKPHIPLLKKLGGLLIVVMGLLLMTGNLNSLSGLFE
>NZ_CP046040.1|WP_038674466.1|566935_567586_+|TlpA-family-protein-disulfide-reductase
MKKTTFLTTGLACLALLTACSAKDKMAMNDSKKDHMTMTDDKSKMKKDQKDMMSDKKDMMSDDKHMSDADKASKNDGQMAPDFELKSIDGKTYRLSDFKGKKVYLKFWASWCSICLSTLGDTQSLATMKDKDFEVLTIVSPGHQGEKSEADFKKWFEGTDFKDLPVLLDPDGKLLEAYGVRSYPTEIFVGSDGVLAKKHIGYAKKSEIEKTLKEIK
>NZ_CP046040.1|WP_012679147.1|567603_568716_+|peptide-methionine-(R)-S-oxide-reductase-MsrB
MEHKWKLLLLVFGALVFLGGVLMVFQRGYATSYHNNQVKLPAKGTSQLKKTANAKLPEKKKEIYLAGGCFWGVEEYFSNVDGVLDAVSGYANGRGDTTSYQLLHQTGHAETVQVVYDANRISLKELLLHYFRIIDPTSLNKQGNDRGSQYRTGIYYTDPSDLTTIDMVFQEKASDYKKKIVVEKAPLKSFTKAEEYHQDYLKKNPNGYCHINVNEASYPVIDKTKYPKPSKEEIKKKLSKDEYRVTQNNETEKAFSNRYWDSFEAGIYVDVVTGEPLFSSKDKFESGCGWPSFSRPISPDVLRYKTDKSFNMNRTEVRSRSGNSHLGHVFTDGPKDQGGLRYCINSLSIRFIPKAEMEAKGYGYLLTAVD
>NZ_CP046040.1|WP_014622481.1|568983_569724_+|response-regulator
MYSLLIVEDEYLVRQGIRSLVDFDQFAIDRIAEAENGQVAWELFQENPYDIVLTDINMPKLNGIQLAELIKAKAPKTHLVFLTGYDDFNYALSALKLGADDYLLKPFSKSDVEEMLKKLKQKLEKLKKTEALQKLIDKPQQEGSEIKLAIQERLADSSLTLKSLSSQLGFSPNYLSVLIKKDLGLPFQDYLIQERLKKAKLLLLTTDLRVYEIAEQVGFEDINYFSQRFKQLVGMTPRQYKKGEGQ
>NZ_CP046040.1|WP_014622482.1|569720_571439_+|sensor-histidine-kinase
MKRYPLLVQLVSYFFLIVISLITILGLIYYQTSSHNIRQLIERETRQSIRQSSQFIDAYIKPLKETTSALASHAEIQSFAKAANSSHQEQVLALMTTVLSTNSDLLSAVLVTKDGRMVTTNPQLTMTTSHDMMAELWYKSAIDRKAMPVLTPARQLSSHSKKDWVVSVTQEVVDQAGNNLGVLRLDIGYNTIKSSLDQLQLGRKGFAFIVNDKHEFVYHPKNTVYSSAKEMAAMKPYLAVTDGYTRPKDYFVYQRVIPDSQWTLVGVASLDQLYHVQRQIFWSFLGTGLLATVICGLGTVFVLRSWIGPIRRLQALILAIQKGNRQLRAEETGSPELADLARQFNAMLDQIDSLMVSVADKEKAIGQYRLQALASQINPHFLYNTLDTIIWMAEFNDSQRVVDVTKSLAKYFRLALNQGNELISLADELDHARQYLFIQKQRYGDKLHYEIKGLEKYQDFMIPKLILQPLVENAIYHGIKEVDRPGIIRVTVSEADRHVILSVWDNGKGISLADDSSQALLERGGVGLKNVDQRLRLQYGHLYRMAITSEQAVFTEIKLYLPKALDSLDEAP
>NZ_CP046040.1|WP_014622483.1|571478_572567_+|hypothetical-protein
MSLESDYFKRKSPIFEALIPYGFTQEGDTYCYQESFMEGDFKALITIKSSGQLSARVIDTDLGEDYLPLRNARQQGVYIGQVRQAYLELLGRLSAACFRPTPFQTRQANQVATSISQQWNDPLDYPFEKYPNIATYRVSGKWYAMILPLLADKLGQVPKALQGQTVEVMTVKAAPNQLTNLLQQRGVYPAYHMSKKTWISLLLDGTLADDQLWELVTKSRQLANPNGLANPDGPDYWVIPANLSYYDIDAEFAANPDILWTQKASIKAGDYVFIYITAPTRSIRYACQVLRSDIPNQGYRKNAKIKTLMSLRLLHCYEDGLISLDLMKQYGVNAVRGPRRLSPQLVAFLKEKEYFKDVKQKE
>NZ_CP046040.1|WP_014622484.1|572581_573286_+|B3/4-domain-containing-protein
MTQFIADQSFWELFPDAKLGVLLLRNYDNQEDSPQEVKQLLADSHDIAKQYLTEESFSDNEIIQVYRQAYQRFKTKKGARSSIEALLKRVANGQVLSSINPLVDIYNAASLRFGLPVGAEDSDCFVGDLRLTLTEGGDEFYLIGDSKNSPTLPNELCYKDDAGAVCRCLNWRDGERTMITDRTKNAFLIIEALDTKTQARLQDALKFIEDKAKRYLKAETALYTLDQASPSITL
>NZ_CP046040.1|WP_038674462.1|573522_574011_+|prolyl-tRNA-synthetase-associated-domain-containing-protein
MELFDKVDDTLKALAIDYQLVEHEPALTTEQADQFIEGIEGVRTKTMFLTTRKKTHFYLIIMDDTKRLDMNRFKELVGEKQIKMASAECLLAKMQLPPGVVSPFGLLNNEDKDIQVYVDKAIAHEARMSFHPNTNDKTIFIQTDDLFKFLAAIGYAVNIVDL
>NZ_CP046040.1|WP_012515211.1|574654_575128_-|arginine-repressor
MNKKETRHQLIRSLISETTIHTQQELQERLRKNGISITQATLSRDMKELNLVKVTTGNDTHYEALAISQTRWEHRLRFYMEDALVMLRVVQHQIILKTLPGLAQSFGSILDAMQISEIVATICGDDTCLIICEDNEQAKACFEILSHYTPPFFFSNK
>NZ_CP046040.1|WP_014622486.1|575268_575949_+|Crp/Fnr-family-transcriptional-regulator
MIRREDYQYLRKLDDFCHFSIEQFDKIVGQMEFRQAKKDHMLFFEGDKRDRLFLVTSGYFKIEQSDRTGTFTYTDFIRHGTIFPYGGLFTDDYYHFSVVAMTDVTYFYFPTDLFEDYSLHNQQQMKHLYSKMSSLLELHELKVRNLITSSASSRVIQSLAILLVEMGKDSDTLPFQLTTTDIAQMSGTTRETVSHVFRDLKKEGLIAVKGKYLTYLDKSYFLQYTT

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Crispr_ID: NZ_CP046040_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046040_3

574368-574523

TypeI

Consensus_repeat	Method
CTCCTTTTGCAGGAGTGTGGATTG	CRISPRCasFinder

2 spacers

cas2,cas1

The CRISPR arrays of NZ_CP046040_3

>merge|NZ_CP046040|3|574368-574523|CRISPRCasFinder
CTCCCTTCACAGGGACGTGGAATGAAATATCAGTTGTTAATGAGGAGATGGAAAGTTCGTTTATCACTCCTTTTGCAGGAGTGTGGATTGAAATTTTTGGGTGCAGCTTAGCATTATTTTCATACATTGTCGCTCCTTTTGCAGGAGCGTGGATTG

>NZ_CP046040|3|2|574368-574523|CRISPRCasFinder
CTCCCTTCACAGGGACGTGGAATG	AAATATCAGTTGTTAATGAGGAGATGGAAAGTTCGTTTATCA
CTCCTTTTGCAGGAGTGTGGATTG	AAATTTTTGGGTGCAGCTTAGCATTATTTTCATACATTGTCG
CTCCTTTTGCAGGAGCGTGGATTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046040.1\|WP_014622489.1\|580593_581925_+\|Sapep-family-Mn(2+)-dependent-dipeptidase	unknown	unknown	gnl\|CDD\|235965
NZ_CP046040.1\|WP_014622486.1\|575268_575949_+\|Crp/Fnr-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223736
NZ_CP046040.1\|WP_014622488.1\|579083_580577_+\|YfcC-family-protein	unknown	unknown	gnl\|CDD\|224207
NZ_CP046040.1\|WP_012515218.1\|581942_582893_+\|carbamate-kinase	unknown	unknown	gnl\|CDD\|237071
NZ_CP046040.1\|WP_038674466.1\|566935_567586_+\|TlpA-family-protein-disulfide-reductase	unknown	unknown	gnl\|CDD\|239264
NZ_CP046040.1\|WP_012515215.1\|577908_578922_+\|ornithine-carbamoyltransferase	unknown	unknown	gnl\|CDD\|179366
NZ_CP046040.1\|WP_014622484.1\|572581_573286_+\|B3/4-domain-containing-protein	unknown	unknown	gnl\|CDD\|225917
NZ_CP046040.1\|WP_012515214.1\|577462_577894_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379326
NZ_CP046040.1\|WP_014622482.1\|569720_571439_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225519
NZ_CP046040.1\|WP_038674462.1\|573522_574011_+\|prolyl-tRNA-synthetase-associated-domain-containing-protein	unknown	unknown	gnl\|CDD\|239827
NZ_CP046040.1\|WP_014622487.1\|576217_577453_+\|arginine-deiminase	unknown	unknown	gnl\|CDD\|234949
NZ_CP046040.1\|WP_012515211.1\|574654_575128_-\|arginine-repressor	unknown	unknown	gnl\|CDD\|224355
NZ_CP046040.1\|WP_014622483.1\|571478_572567_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225197
NZ_CP046040.1\|WP_012679147.1\|567603_568716_+\|peptide-methionine-(R)-S-oxide-reductase-MsrB	unknown	unknown	gnl\|CDD\|184456
NZ_CP046040.1\|WP_014622479.1\|566211_566922_+\|thiol-disulfide-oxidoreductase-associated-membrane-protein-CcdA2	unknown	unknown	gnl\|CDD\|223856
NZ_CP046040.1\|WP_014622490.1\|584273_584813_+\|16S-rRNA-(guanine(966)-N(2))-methyltransferase-RsmD	unknown	unknown	gnl\|CDD\|367574
NZ_CP046040.1\|WP_014622476.1\|563046_563340_+\|CRISPR-associated-endonuclease-Cas2	cas2	COG1343_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|187856
NZ_CP046040.1\|WP_014622481.1\|568983_569724_+\|response-regulator	unknown	unknown	gnl\|CDD\|227095
NZ_CP046040.1\|WP_014622475.1\|562010_563036_+\|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
NZ_CP046040.1\|WP_012515219.1\|583111_584104_+\|aspartate--ammonia-ligase	unknown	unknown	gnl\|CDD\|225304

Protein	Function_ID	Function_description	E-value
NZ_CP046040.1\|WP_014622489.1\|580593_581925_+\|Sapep-family-Mn(2+)-dependent-dipeptidase	gnl\|CDD\|235965	PRK07205, PRK07205, hypothetical protein; Provisional.	0
NZ_CP046040.1\|WP_014622486.1\|575268_575949_+\|Crp/Fnr-family-transcriptional-regulator	gnl\|CDD\|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	1.56348e-40
NZ_CP046040.1\|WP_014622488.1\|579083_580577_+\|YfcC-family-protein	gnl\|CDD\|224207	COG1288, COG1288, Predicted membrane protein [Function unknown].	0
NZ_CP046040.1\|WP_012515218.1\|581942_582893_+\|carbamate-kinase	gnl\|CDD\|237071	PRK12353, PRK12353, putative amino acid kinase; Reviewed.	0
NZ_CP046040.1\|WP_038674466.1\|566935_567586_+\|TlpA-family-protein-disulfide-reductase	gnl\|CDD\|239264	cd02966, TlpA_like_family, TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.	6.60058e-35
NZ_CP046040.1\|WP_012515215.1\|577908_578922_+\|ornithine-carbamoyltransferase	gnl\|CDD\|179366	PRK02102, PRK02102, ornithine carbamoyltransferase; Validated.	0
NZ_CP046040.1\|WP_014622484.1\|572581_573286_+\|B3/4-domain-containing-protein	gnl\|CDD\|225917	COG3382, COG3382, Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta [General function prediction only].	1.20864e-91
NZ_CP046040.1\|WP_012515214.1\|577462_577894_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379326	pfam13673, Acetyltransf_10, Acetyltransferase (GNAT) domain. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	4.4544e-15
NZ_CP046040.1\|WP_014622482.1\|569720_571439_+\|sensor-histidine-kinase	gnl\|CDD\|225519	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].	6.38139e-64
NZ_CP046040.1\|WP_038674462.1\|573522_574011_+\|prolyl-tRNA-synthetase-associated-domain-containing-protein	gnl\|CDD\|239827	cd04335, PrdX_deacylase, This CD includes bacterial (Agrobacterium tumefaciens and Caulobacter crescentus ProX, and Clostridium sticklandii PrdX) and eukaryotic (Plasmodium falciparum N-terminal ProRS editing domain) sequences. The C. sticklandii PrdX protein, a homolog of the YbaK and ProX proteins, and the prolyl-tRNA synthetase-editing domain (ProRS-INS), specifically hydrolyzes Ala-tRNA(Pro). In this CD, many of the eukaryotic editing domains are N-terminal and cis-acting, expressed from a multidomain ProRS, however, similar to the bacterial PrdX, the mammalian, amphibian, and echinoderm PrdX-like proteins are trans-acting, single-domain proteins.	1.71569e-59
NZ_CP046040.1\|WP_014622487.1\|576217_577453_+\|arginine-deiminase	gnl\|CDD\|234949	PRK01388, PRK01388, arginine deiminase; Provisional.	0
NZ_CP046040.1\|WP_012515211.1\|574654_575128_-\|arginine-repressor	gnl\|CDD\|224355	COG1438, ArgR, Arginine repressor [Transcription].	8.79004e-63
NZ_CP046040.1\|WP_014622483.1\|571478_572567_+\|hypothetical-protein	gnl\|CDD\|225197	COG2315, MmcQ, Uncharacterized protein conserved in bacteria [Function unknown].	1.40835e-23
NZ_CP046040.1\|WP_012679147.1\|567603_568716_+\|peptide-methionine-(R)-S-oxide-reductase-MsrB	gnl\|CDD\|184456	PRK14018, PRK14018, bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB.	5.09976e-165
NZ_CP046040.1\|WP_014622479.1\|566211_566922_+\|thiol-disulfide-oxidoreductase-associated-membrane-protein-CcdA2	gnl\|CDD\|223856	COG0785, CcdA, Cytochrome c biogenesis protein [Posttranslational modification, protein turnover, chaperones].	8.62107e-42
NZ_CP046040.1\|WP_014622490.1\|584273_584813_+\|16S-rRNA-(guanine(966)-N(2))-methyltransferase-RsmD	gnl\|CDD\|367574	pfam03602, Cons_hypoth95, Conserved hypothetical protein 95.	2.20799e-88
NZ_CP046040.1\|WP_014622476.1\|563046_563340_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	5.51767e-31
NZ_CP046040.1\|WP_014622481.1\|568983_569724_+\|response-regulator	gnl\|CDD\|227095	COG4753, COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms].	1.72654e-78
NZ_CP046040.1\|WP_014622475.1\|562010_563036_+\|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	0
NZ_CP046040.1\|WP_012515219.1\|583111_584104_+\|aspartate--ammonia-ligase	gnl\|CDD\|225304	COG2502, AsnA, Asparagine synthetase A [Amino acid transport and metabolism].	0

>NZ_CP046040.1|WP_038674462.1|573522_574011_+|prolyl-tRNA-synthetase-associated-domain-containing-protein
MELFDKVDDTLKALAIDYQLVEHEPALTTEQADQFIEGIEGVRTKTMFLTTRKKTHFYLIIMDDTKRLDMNRFKELVGEKQIKMASAECLLAKMQLPPGVVSPFGLLNNEDKDIQVYVDKAIAHEARMSFHPNTNDKTIFIQTDDLFKFLAAIGYAVNIVDL
>NZ_CP046040.1|WP_014622484.1|572581_573286_+|B3/4-domain-containing-protein
MTQFIADQSFWELFPDAKLGVLLLRNYDNQEDSPQEVKQLLADSHDIAKQYLTEESFSDNEIIQVYRQAYQRFKTKKGARSSIEALLKRVANGQVLSSINPLVDIYNAASLRFGLPVGAEDSDCFVGDLRLTLTEGGDEFYLIGDSKNSPTLPNELCYKDDAGAVCRCLNWRDGERTMITDRTKNAFLIIEALDTKTQARLQDALKFIEDKAKRYLKAETALYTLDQASPSITL
>NZ_CP046040.1|WP_014622483.1|571478_572567_+|hypothetical-protein
MSLESDYFKRKSPIFEALIPYGFTQEGDTYCYQESFMEGDFKALITIKSSGQLSARVIDTDLGEDYLPLRNARQQGVYIGQVRQAYLELLGRLSAACFRPTPFQTRQANQVATSISQQWNDPLDYPFEKYPNIATYRVSGKWYAMILPLLADKLGQVPKALQGQTVEVMTVKAAPNQLTNLLQQRGVYPAYHMSKKTWISLLLDGTLADDQLWELVTKSRQLANPNGLANPDGPDYWVIPANLSYYDIDAEFAANPDILWTQKASIKAGDYVFIYITAPTRSIRYACQVLRSDIPNQGYRKNAKIKTLMSLRLLHCYEDGLISLDLMKQYGVNAVRGPRRLSPQLVAFLKEKEYFKDVKQKE
>NZ_CP046040.1|WP_014622482.1|569720_571439_+|sensor-histidine-kinase
MKRYPLLVQLVSYFFLIVISLITILGLIYYQTSSHNIRQLIERETRQSIRQSSQFIDAYIKPLKETTSALASHAEIQSFAKAANSSHQEQVLALMTTVLSTNSDLLSAVLVTKDGRMVTTNPQLTMTTSHDMMAELWYKSAIDRKAMPVLTPARQLSSHSKKDWVVSVTQEVVDQAGNNLGVLRLDIGYNTIKSSLDQLQLGRKGFAFIVNDKHEFVYHPKNTVYSSAKEMAAMKPYLAVTDGYTRPKDYFVYQRVIPDSQWTLVGVASLDQLYHVQRQIFWSFLGTGLLATVICGLGTVFVLRSWIGPIRRLQALILAIQKGNRQLRAEETGSPELADLARQFNAMLDQIDSLMVSVADKEKAIGQYRLQALASQINPHFLYNTLDTIIWMAEFNDSQRVVDVTKSLAKYFRLALNQGNELISLADELDHARQYLFIQKQRYGDKLHYEIKGLEKYQDFMIPKLILQPLVENAIYHGIKEVDRPGIIRVTVSEADRHVILSVWDNGKGISLADDSSQALLERGGVGLKNVDQRLRLQYGHLYRMAITSEQAVFTEIKLYLPKALDSLDEAP
>NZ_CP046040.1|WP_014622481.1|568983_569724_+|response-regulator
MYSLLIVEDEYLVRQGIRSLVDFDQFAIDRIAEAENGQVAWELFQENPYDIVLTDINMPKLNGIQLAELIKAKAPKTHLVFLTGYDDFNYALSALKLGADDYLLKPFSKSDVEEMLKKLKQKLEKLKKTEALQKLIDKPQQEGSEIKLAIQERLADSSLTLKSLSSQLGFSPNYLSVLIKKDLGLPFQDYLIQERLKKAKLLLLTTDLRVYEIAEQVGFEDINYFSQRFKQLVGMTPRQYKKGEGQ
>NZ_CP046040.1|WP_012679147.1|567603_568716_+|peptide-methionine-(R)-S-oxide-reductase-MsrB
MEHKWKLLLLVFGALVFLGGVLMVFQRGYATSYHNNQVKLPAKGTSQLKKTANAKLPEKKKEIYLAGGCFWGVEEYFSNVDGVLDAVSGYANGRGDTTSYQLLHQTGHAETVQVVYDANRISLKELLLHYFRIIDPTSLNKQGNDRGSQYRTGIYYTDPSDLTTIDMVFQEKASDYKKKIVVEKAPLKSFTKAEEYHQDYLKKNPNGYCHINVNEASYPVIDKTKYPKPSKEEIKKKLSKDEYRVTQNNETEKAFSNRYWDSFEAGIYVDVVTGEPLFSSKDKFESGCGWPSFSRPISPDVLRYKTDKSFNMNRTEVRSRSGNSHLGHVFTDGPKDQGGLRYCINSLSIRFIPKAEMEAKGYGYLLTAVD
>NZ_CP046040.1|WP_038674466.1|566935_567586_+|TlpA-family-protein-disulfide-reductase
MKKTTFLTTGLACLALLTACSAKDKMAMNDSKKDHMTMTDDKSKMKKDQKDMMSDKKDMMSDDKHMSDADKASKNDGQMAPDFELKSIDGKTYRLSDFKGKKVYLKFWASWCSICLSTLGDTQSLATMKDKDFEVLTIVSPGHQGEKSEADFKKWFEGTDFKDLPVLLDPDGKLLEAYGVRSYPTEIFVGSDGVLAKKHIGYAKKSEIEKTLKEIK
>NZ_CP046040.1|WP_014622479.1|566211_566922_+|thiol-disulfide-oxidoreductase-associated-membrane-protein-CcdA2
MELTMLLMVSVFIAGLLSFFSPCIFPVLPVYLGILLDSDDSRSITIFGKKLYWYGIVKTLAFISGLSTIFIILGYGAGLLGNILYAAWFRYLLGAFVILLGIHQMEIVTIKKLQFQKSVAFQNKKDRNAVLNAFLLGITFSFGWTPCVGPVLSSVLALAASGGSGAWQGGFLMIIYTLGLGLPFLLLSFASGIVLKHFNKLKPHIPLLKKLGGLLIVVMGLLLMTGNLNSLSGLFE
>NZ_CP046040.1|WP_014622476.1|563046_563340_+|CRISPR-associated-endonuclease-Cas2
MMVLVTYDVNTETASGRKRLRQVAKLCVDYGQRVQHSVFECSVTPAEFVEIKHKLTTIIDMEMDSIRFYLLGKHWQNRVETLGRSDSYDPDIGVLLL
>NZ_CP046040.1|WP_014622475.1|562010_563036_+|type-I-C-CRISPR-associated-endonuclease-Cas1
MKKLLNTLYLTQEDYYITKEGDNIVIKQDGKTVSRFPFRIIDGVVCFSYLGASPALIKLCTENQINLSFHTPQGRFCGRYVGATNGNVLLRREHYRLADRDESLEYAKRFILAKISNARKYLLRFRRDHREQIDTKLFEVVNSELIWALEMVQATDNKDSLRGIEGQAANQYFRIFNDLVLTDKKAFTFGGRSKRPPLDRVNALLSFGYSLLTFECQSALEAVGLDSYVGFFHTDRPGRASLALDLVEEFRSYIVDRFVFSLINKGQLTKKHFDVKENGSILLTEKGRVTFIELWQKRKHMEVEHPFTKEKVKLMLLPYVQAQLLAKAIRGDIDSYPPFMI
>NZ_CP046040.1|WP_012515211.1|574654_575128_-|arginine-repressor
MNKKETRHQLIRSLISETTIHTQQELQERLRKNGISITQATLSRDMKELNLVKVTTGNDTHYEALAISQTRWEHRLRFYMEDALVMLRVVQHQIILKTLPGLAQSFGSILDAMQISEIVATICGDDTCLIICEDNEQAKACFEILSHYTPPFFFSNK
>NZ_CP046040.1|WP_014622486.1|575268_575949_+|Crp/Fnr-family-transcriptional-regulator
MIRREDYQYLRKLDDFCHFSIEQFDKIVGQMEFRQAKKDHMLFFEGDKRDRLFLVTSGYFKIEQSDRTGTFTYTDFIRHGTIFPYGGLFTDDYYHFSVVAMTDVTYFYFPTDLFEDYSLHNQQQMKHLYSKMSSLLELHELKVRNLITSSASSRVIQSLAILLVEMGKDSDTLPFQLTTTDIAQMSGTTRETVSHVFRDLKKEGLIAVKGKYLTYLDKSYFLQYTT
>NZ_CP046040.1|WP_014622487.1|576217_577453_+|arginine-deiminase
MTAQTPIHVYSEIGKLKKVLLHRPGKEIENLMPDYLERLLFDDIPFLEDAQKEHDAFAQALRDEGVEVLYLETLAAESLVTPEIREAFIDEYLSEANIRGRATKKAIRELLMSIEDNQELIEKTMAGVQKSELPEIPAAEKGLTDLVESSYPFAIDPMPNLYFTRDPFATIGTGVSLNHMFSETRNRETIYGKYIFTHHPIYGGGKVPMVYDRNETTRIEGGDELVLSKDVLAVGISQRTDAASIEKLLVNIFKQNLGFKKVLAFEFANNRKFMHLDTVFTMVDYDKFTIHPEIEGDLRVYSVTYENEALRIVEETGDLAELLAANLGVERVELIRCGGDNLVAAGREQWNDGSNTLTIAPGVVVVYNRNTITNAILESKGLKLIKIHGSELVRGRGGPRCMSMPFEREDI
>NZ_CP046040.1|WP_012515214.1|577462_577894_+|GNAT-family-N-acetyltransferase
MTRVIVGNQPFQRAASLYIRYQVFVLERQIDRQDEFDCFDDNDRVYAVLYDGDQPVSTARFLPTAKDQARLTRVATLRQYRGRGYGAQVIEALEQYAREQAYERLVIHSEISAQSFYEGLGYQAFGEPYDEDGEPCQSVEKYL
>NZ_CP046040.1|WP_012515215.1|577908_578922_+|ornithine-carbamoyltransferase
MTQVFQGRSFLAEKDFTREEFEYLIDFAAHLKDLKKRGIPHHYLEGKNIALLFEKTSTRTRAAFTTAAIDLGAHPEYLGANDIQLGKKESTEDTAKVLGRMFDGIEFRGFSQRMVEELAEFSGVPVWNGLTDEWHPTQMLADYLTVKENFGKLEGLTLVYCGDGRNNVANSLLVAGTLLGVNVHIFSPKELFPAEDIVKLAEGYAKASGAHVLVTDNADEAVKGADVLYTDVWVSMGEEDKFEERVKLLKPYQVNMELVKKADNDNLIFLHCLPAFHDTNTVYGKDVAEKFGVEEMEVTDEVFRSKYARHFDQAENRMHTIKAVMAATLGNLFIPKV
>NZ_CP046040.1|WP_014622488.1|579083_580577_+|YfcC-family-protein
MTEEKKRGFKIPSSYTVLFIIIAIMAVLTWFIPAGAYETAKDGGVISGTYQTVKSNPQGFFDILMAPVRGMLGVKGTEGAIQVSFFILMVGGFLGVVNKTGALDTGIASVVRKNKGREKLLIAILIPLFALGGTTYGMGEETMAFYPLLIPVMIAVGFDSIVAVAIILIGSQIGCLASTINPFATGVAADAAGVSIADGMIWRIIQWFILVGMSIWFVYSYASKIEKDPSKSLVADKAEEHKEFFQLQNSGEDLTSRQRKVLAIFTLTFVIMILSLIPWEDFGIKLFTNINTWLTTTPVLGGIIGKTMGAFGTWYFPEITMLFIMMGVLVAIVYRMSEEDFFSAFLSGAGEFLGVAIICAVARGIQVIMNGGMITATILHWGETGLAGLSSQVFVILAYIFYLPMSFLIPSTSGLAGATMGIMAPLGQFSNVPAHLVITAFQSASGILNMISPTSAIVMGALALGRIDLSTWWKFIGKFIVMVMLVSVLLLVVATFF
>NZ_CP046040.1|WP_014622489.1|580593_581925_+|Sapep-family-Mn(2+)-dependent-dipeptidase
METYIQSRHQEACVAAIKKIVSYPSVLNEGENGTPFGQAIQDVLEATLALCQDLGFKTYIDPKGYYGYAELGDQTEVLAILCHLDVVPTGDLKLWHTDPFTCIEKDGCLYGRGTQDDKGPSMMALFATKALMDAGVVFNKRIRFIFGTDEETLWRCMNRYNEVEEEATFGFAPDSSFPLTYAEKGLLQAKLVGKGSARLNLEVGQAYNVVPARASYQGDKLEALGEELDRLGFEYVVKDGELTVYGLAQHAKDAPDGINALIRLAKALVVLEPEPVLDFLAHVVNEDGRAVNIFGPVQDEPSGGLSFNVAGLTLTKEVTEVRLDIRIPVLADKDTLVDQLSQKAQDYGLAYEEFDYLAPLYVPLDSELVTTLLEVYREKTGDQSPAQSSGGATFARTMANCVAFGALFPDAVQTEHQENERIVLADAYRAMDIYAEAIYRLTR
>NZ_CP046040.1|WP_012515218.1|581942_582893_+|carbamate-kinase
MTKQKIVVALGGNAILSTDASAKAQQEALVSTSKSLVKLIKEGHEVIITHGNGPQVGNLLLQQAAADSEKNPAMPLDTCVAMTEGSIGFWLVNALDNELQAQGITKEVAAVVTQVIVDENDPAFKNPTKPIGPFLTEEDAKKQMAESGASFKEDAGRGWRKVVPSPKPIGIKEANVIRSLVDSGVVVVSAGGGGVPVVKDPASKTLTGVEAVIDKDFASQTLSELVDADLFIVLTGVDNVYVNFNKPDQRKLEEVTVSQMKEYIAQDQFAPGSMLPKVEAAIAFVENKPNAKAIITSLENIDNVLSANAGTQIIAG
>NZ_CP046040.1|WP_012515219.1|583111_584104_+|aspartate--ammonia-ligase
MKKSFIHQQEEISFVKNTFTQYLIAKLDVVEVQGPILSRVGDGMQDNLSGVENPVSVHVLNIPNATFEVVHSLAKWKRHTLARFGFNEGEGLVVNMKALRPDEDSLDQTHSVYVDQWDWEKVIPDGQRNLAYLKETVETIYKVIRLTELAVEARYDIEAVLPKKITFIHTEELVARYPDLTPKERENAITKEFGAVFLIGIGGVLPDGKPHDGRAPDYDDWTSESENGYHGLNGDILVWNEQLGTAFELSSMGIRVDEEALKRQVDITGDQERLQFDWHKSLLNGLFPLTIGGGIGQSRMAMFLLRKKHIGEVQTSVWPQEVRDTYDNIL
>NZ_CP046040.1|WP_014622490.1|584273_584813_+|16S-rRNA-(guanine(966)-N(2))-methyltransferase-RsmD
MRIVSGEFGGRPLKTLEGKTTRPTSDKVRGAIFNMIGPYFKGGRVLDLFAGSGGLSIEAISRGMSEAVLVERDRKAQAIIQANIEMTKASQQFTLLKMDAERAFDHLSGQFDVVFLDPPYAKEAIVANIEALAERGLLSDDVMIVCETDRSVALPEEIAWLGIWKEKQYGISKVTVYVR

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Crispr_ID: NZ_CP046040_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046040_4

931808-931917

Orphan

Consensus_repeat	Method
CTGACTTGATGACAGCTTATACTAAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP046040_4

>merge|NZ_CP046040|4|931808-931917|CRISPRCasFinder
CTGACTTGATGACAGCTTATACTAAAATGCAATATAATTTGTCGTTTGAGTCAATAATAAGATGATAGATCATTACTATTTATCTGAGTTGATGACAGCTTATACTAAAA

>NZ_CP046040|4|3|931808-931917|CRISPRCasFinder
CTGACTTGATGACAGCTTATACTAAAA	TGCAATATAATTTGTCGTTTGAGTCAATAATAAGATGATAGATCATTACTATTTAT
CTGAGTTGATGACAGCTTATACTAAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046040.1\|WP_041788229.1\|918406_920377_+\|Cna-B-type-domain-containing-protein	unknown	unknown	gnl\|CDD\|377553
NZ_CP046040.1\|WP_014622745.1\|933958_934636_+\|DUF4956-domain-containing-protein	unknown	unknown	gnl\|CDD\|379819
NZ_CP046040.1\|WP_014622736.1\|920391_921834_+\|isopeptide-forming-domain-containing-fimbrial-protein	unknown	unknown	gnl\|CDD\|374637
NZ_CP046040.1\|WP_038674354.1\|939975_943200_+\|ATP-dependent-nuclease-subunit-B	unknown	unknown	gnl\|CDD\|274291
NZ_CP046040.1\|WP_148255839.1\|933249_933945_+\|VTC-domain-containing-protein	unknown	unknown	gnl\|CDD\|143622
NZ_CP046040.1\|WP_014622748.1\|938370_939765_+\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|133045
NZ_CP046040.1\|WP_012678093.1\|926391_926847_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046040.1\|WP_014622741.1\|927952_931669_+\|pullulanase	unknown	unknown	gnl\|CDD\|273973
NZ_CP046040.1\|WP_014622751.1\|947090_948215_+\|aminotransferase	unknown	unknown	gnl\|CDD\|235989
NZ_CP046040.1\|WP_021320653.1\|923038_924217_+\|YSIRK-type-signal-peptide-containing-protein	unknown	unknown	gnl\|CDD\|370249
NZ_CP046040.1\|WP_014622746.1\|936081_938223_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046040.1\|WP_014622743.1\|932486_933122_+\|membrane-protein	unknown	unknown	gnl\|CDD\|379219
NZ_CP046040.1\|WP_014622739.1\|925563_926112_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046040.1\|WP_012515458.1\|934641_936075_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378045
NZ_CP046040.1\|WP_014622742.1\|931957_932497_+\|RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|224511
NZ_CP046040.1\|WP_154293437.1\|924296_925385_+\|LPXTG-cell-wall-anchor-domain-containing-protein	unknown	unknown	gnl\|CDD\|223021
NZ_CP046040.1\|WP_012515451.1\|926104_926392_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046040.1\|WP_014622750.1\|943186_946828_+\|helicase-exonuclease-AddAB-subunit-AddA	unknown	unknown	gnl\|CDD\|274299
NZ_CP046040.1\|WP_012678098.1\|921914_922724_+\|class-C-sortase	unknown	unknown	gnl\|CDD\|320676
NZ_CP046040.1\|WP_049780494.1\|917744_918320_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228

Protein	Function_ID	Function_description	E-value
NZ_CP046040.1\|WP_041788229.1\|918406_920377_+\|Cna-B-type-domain-containing-protein	gnl\|CDD\|377553	pfam05738, Cna_B, Cna protein B-type domain. This domain is found in Staphylococcus aureus collagen-binding surface protein. The structure of the repetitive B-region has been solved and forms a beta sandwich structure.	6.57074e-30
NZ_CP046040.1\|WP_014622745.1\|933958_934636_+\|DUF4956-domain-containing-protein	gnl\|CDD\|379819	pfam16316, DUF4956, Domain of unknown function (DUF4956). This family consists of uncharacterized proteins around 220 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown.	1.28628e-08
NZ_CP046040.1\|WP_014622736.1\|920391_921834_+\|isopeptide-forming-domain-containing-fimbrial-protein	gnl\|CDD\|374637	pfam16569, GramPos_pilinBB, Gram-positive pilin backbone subunit 2, Cna-B-like domain. GramPos_pilinBB is one of the major backbone units of Gram-positive pili, such as those from S.pneumoniae. There are three major pilin subunits that form the polymeric backbone of the pilin from S. pneumoniae, constructed of three transthyretin-like, CnaB, domains along with a crucial N-terminal domain, D1. The three Cna-B like domains are stabilized by internal Lys-Asn isopeptdie bonds, Gram-positive pili are formed from a single chain of covalently linked subunit proteins (pilins), usually comprising an adhesin at the distal tip, a major pilin that forms the polymer shaft and a minor pilin that mediates cell wall anchoring at the base.	4.74171e-20
NZ_CP046040.1\|WP_038674354.1\|939975_943200_+\|ATP-dependent-nuclease-subunit-B	gnl\|CDD\|274291	TIGR02774, putative_ATP-dependent_exonuclease_subunit_B, ATP-dependent nuclease subunit B. DNA repair is accomplished by several different systems in prokaryotes. Recombinational repair of double-stranded DNA breaks involves the RecBCD pathway in some lineages, and AddAB (also called RecAB) in other. The AddA protein is conserved between the firmicutes and the alphaproteobacteria, while the partner protein is not. The partner may be designated AddB, as in Bacillus and in alphaproteobacteria, or RexB as in Streptococcus and Lactococcus. Note, however, that RexB proteins lack an N-terminal GxxGxGK[ST] ATP-binding motif found in Bacillus subtilis and related species, and this difference may be important; this model represents specifically RexB proteins as found in Streptococcus and Lactococcus. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP046040.1\|WP_014622751.1\|947090_948215_+\|aminotransferase	gnl\|CDD\|235989	PRK07324, PRK07324, transaminase; Validated.	0
NZ_CP046040.1\|WP_148255839.1\|933249_933945_+\|VTC-domain-containing-protein	gnl\|CDD\|143622	cd07750, PolyPPase_VTC_like, Polyphosphate(polyP) polymerase domain of yeast vacuolar transport chaperone (VTC) proteins VTC-2, -3 and- 4, and similar proteins. Saccharomyces cerevisiae VTC-1, -2, -3, and -4 comprise the membrane-integral VTC complex. VTC-2, -3, and -4 contain polyP polymerase domains. For S. cerevisiae VTC4 it has been shown that this domain generates polyP from ATP by a phosphotransfer reaction releasing ADP. This activity is metal ion-dependent. The ATP gamma phosphate may be cleaved and then transferred to an acceptor phosphate to form polyP. PolyP is ubiquitous. In prokaryotes, it is a store of phosphate and energy. In eukaryotes, polyPs have roles in bone calcification, and osmoregulation, and in phosphate transport in the symbiosis of mycorrhizal fungi and plants. This subgroup belongs to the CYTH/triphosphate tunnel metalloenzyme (TTM)-like superfamily, whose enzymes have a unique active site located within an eight-stranded beta barrel.	1.70435e-63
NZ_CP046040.1\|WP_014622741.1\|927952_931669_+\|pullulanase	gnl\|CDD\|273973	TIGR02102, alkaline_amylopullulanase, pullulanase, extracellular, Gram-positive. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. In contrast, a glycogen debranching enzyme such GlgX, homologous to this family, can release glucose at alpha,1-6 linkages from glycogen first subjected to limit degradation by phosphorylase. Characterized members of this family include a surface-located pullulanase from Streptococcus pneumoniae () and an extracellular bifunctional amylase/pullulanase with C-terminal pullulanase activity (.	0
NZ_CP046040.1\|WP_021320653.1\|923038_924217_+\|YSIRK-type-signal-peptide-containing-protein	gnl\|CDD\|370249	pfam09028, Mac-1, Mac 1. The bacterial protein Mac 1 adopts an alpha/beta fold, with 14 beta strands and 9 alpha helices. The N-terminal domain is made up predominantly of alpha helices, whereas the C-terminal domain consists predominantly of beta sheets. Mac 1 blocks polymorphonuclear opsonophagocytosis, inhibits the production of reactive oxygen species and contains IgG endopeptidase activity.	1.82351e-45
NZ_CP046040.1\|WP_014622743.1\|932486_933122_+\|membrane-protein	gnl\|CDD\|379219	pfam13490, zf-HC2, Putative zinc-finger. This is a putative zinc-finger found in some anti-sigma factor proteins.	1.5315e-08
NZ_CP046040.1\|WP_012515458.1\|934641_936075_+\|hypothetical-protein	gnl\|CDD\|378045	pfam08757, CotH, CotH kinase protein. Members of this family include the spore coat protein H (cotH). This protein is an atypical protein kinase that phosphorylates CotB and CotG.	1.35161e-70
NZ_CP046040.1\|WP_014622742.1\|931957_932497_+\|RNA-polymerase-sigma-factor	gnl\|CDD\|224511	COG1595, RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription].	2.90917e-36
NZ_CP046040.1\|WP_154293437.1\|924296_925385_+\|LPXTG-cell-wall-anchor-domain-containing-protein	gnl\|CDD\|223021	PHA03247, PHA03247, large tegument protein UL36; Provisional.	2.73627e-12
NZ_CP046040.1\|WP_014622748.1\|938370_939765_+\|glycosyltransferase-family-2-protein	gnl\|CDD\|133045	cd06423, CESA_like, CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the elongation of beta-1,2 polyglucose chains of Glucan.	1.04573e-55
NZ_CP046040.1\|WP_014622750.1\|943186_946828_+\|helicase-exonuclease-AddAB-subunit-AddA	gnl\|CDD\|274299	TIGR02785, ATP-dependent_helicase/nuclease_subunit_A, helicase-exonuclease AddAB, AddA subunit, Firmicutes type. AddAB, also called RexAB, substitutes for RecBCD in several bacterial lineages. These DNA recombination proteins act before synapse and are particularly important for DNA repair of double-stranded breaks by homologous recombination. The term AddAB is used broadly, with AddA homologous between the Firmicutes (as modeled here) and the alphaproteobacteria, while the partner AddB proteins show no strong homology across the two groups of species. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP046040.1\|WP_012678098.1\|921914_922724_+\|class-C-sortase	gnl\|CDD\|320676	cd05827, Sortase_C, Sortase domain found in class C sortases. Class C sortases are membrane-bound cysteine transpeptidases broadly distributed in Gram-positive bacteria (mainly present in Firmicutes and Actinobacteria). They function as pilin polymerases responsible for the assembly of pili, which are multi-subunit hair-like fibres that extend from the cell surface to promote microbial adhesion and biofilm formation. First, one or more class C sortases form the long thin shaft of the pilus through linking together pilin subunits via isopeptide bonds. The base of the pilus is then anchored to the cell wall by a housekeeping sortase or, in some cases, the class C sortase itself. Depending upon the organism both the number and type of sortase enzymes involved varies, and in some cases, accessory factors appear to be needed. In three-component spaA pilus from Corynebacterium diphtheriae, the prototypical class C sortase (named Cd-SrtA) catalyzes polymerization of the SpaA-type pilus, consisting of the shaft pilin SpaA, tip pilin SpaC and minor pilin SpaB. The pilus shaft is then attached to the cell wall by a housekeeping class E sortase, Cd-SrtF. In the absence of Cd-SrtF, Cd-SrtA attaches the pilus to the cell wall, albeit at a reduced rate. Cd-SrtA can recognize two distinct sorting signals (LPLTG in SpaA and SpaC, and LAFTG in SpaB) and it can employ lysine residues that originate from different proteins (either Lys190 within the pilin motif of SpaA or Lys139 in SpaB). However, Cd-SrtA cannot be able to polymerize the major pilin subunit SpaH, even though it contains LPLTG motif. In two-component pili of prototypical Bacillus cereus, the class C sortase (named Bc-SrtD) cleaves related sorting signals within a major pilin protein BcpA (LPVTG) and a minor tip pilin BcpB (IPNTG), and catalyzes a transpeptidation that joins the threonine residues in each signal to the side-chain of Lys162 in BcpA (located within a pilin motif). Unlike the SpaA pilus in C. diphtheriae, in B. cereus Bc-SrtD is unable to covalently attach the pilus to the cell wall without the help of the housekeeping sortase.	2.20313e-79
NZ_CP046040.1\|WP_049780494.1\|917744_918320_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	4.55763e-10

>NZ_CP046040.1|WP_014622741.1|927952_931669_+|pullulanase
MMKRLRENQALFEERQLFGIRKLKLGVASVAIATAFSLGTVSGQITAAAESLTSVEPIDGAVMVKSEAADHDSKELPEATDISDISGISDVTKVSAAVNADTVKEVQPVAVPLVEDQAQAEATDQSQPSSSIVPVTTDSSLETPEATSSEEPIAEQTLRLHFKTLPAQDLSSLGLWVWDDVETPSDQLGGWPTGATNFSLAKTDDYGYYMDVKLSANQANKVSFLINNTKGDNITGDRTVELISPKVNEVWIDGQELSYYRPLAQGYIRINYYRSDGHYDNKSLWLWGSADASMTSQQGAWPDGIDFKQVGRYGAYIDVKLADFNELGFLLLDERQTGDAVKIQPNDYIFKDLKNHTQIFLKDEDPTIYTNPYFVNHVRLIGAKQVSPSSIEASFTTLADVDKESLLKELKISTDSKEAVAITDITLDEKTHKAVITGDFSQAVATYTVTFHHESFQARPNWQYKDSLYAYDGELGARVREAGAKVDLTIWSPSADKVSLVLYDKADQTKVIGNLALAKGDKGEWSITLSADSGLGISDYRGYFYHYEITRNGKSVLVLDPYAKSLAAWNSELAKTDPSYKVAKAAIVDPAAIGDKELAFADIKGFHKREDAIIYEAHVRDFTSDQAIANDLKAQFGTFAAFVEKLDYLKELGITHVQLLPVMSYYFVNELANKERMLTYSSSDNNYNWGYDPQSYFALTGMYSTDPTDPAKRIEEFKQLVNEIHKRGMGVILDVVYNHTANVDIFEDLEPNYYHFMNADGTARTSFGGGRLGTTHYMSRRVLVDSITYLVDEYKVDGFRFDMMGDHDAAAIEKAFLAAKALNPNIIMLGEGWVTYQGDEHMPEQPADQSWMSQTDTVASFSDDFRNQLKSGFPNEGSPAFITGGARDIMTIFHNIKAQPTNFLADDPGDVIQYIAAHDNLTLFDIIAQSIKKDPSVAANAAEIHRRLRLGNLLVLTSQGTPFLHAGQEYGRTKQFKDEAYKGKVADDKVPNKSHLLVNENGIPFEYPYFIHDSYDSTDAINHFDWAKATDTERYPESTRSQAFTKGLIALRRSTDAFRLASKAEIDQKVKLITVPNEHGIKAQDLVIAYQTTASNGDVYAVFVNADSNDRTIRLTGEFQALLAGEVIVDAKQAGTEALISPEGVVLTKDGVKLSGLTATIIRLRASQSDKGTLGAMTDQAAHHQEKLVAAQTAGEVSQFSAKTLPKTGTSQLDALLALAGSGILAGLGGLVSKSKRR
>NZ_CP046040.1|WP_012678093.1|926391_926847_-|hypothetical-protein
MVKHAKTNLHFELERSISRKVDSKLIAYQVSLSDGFYDKYTKLWDKTYSFDFVINHRAFYAQLTKRCVYDVLLQTLEKISRKAIAKQLAELEALVDVSESKEDFQIFFEKKYKLSFPDLKNCVYPKKKELSDFDQNLWIALHYNPRKERDT
>NZ_CP046040.1|WP_012515451.1|926104_926392_-|hypothetical-protein
MTTWYDYMVRASEHAGSDGDLWFRYLYKIIKDGETKLTTDDVEQLLKNPNLTPFQKVTLQDALTEGTHTREHVLQANRKSQPKDILKLFREGNYG
>NZ_CP046040.1|WP_014622739.1|925563_926112_-|hypothetical-protein
MDKKILFKALNTELAKENISLDIICVGGFVLEYYNLRGTQDVDAFYQEGVNIRQMIKKVGDEFGVNEPDELWLNNSVANLNRIPPKTICETVFHYSNLIVLVPPLSYILGMKLESGRDRDRQDAGDIIKLANIRSPKKLINTLEEYGFQPDISMILEVFEIAYGMEWLANYMTEHPEEFRHY
>NZ_CP046040.1|WP_154293437.1|924296_925385_+|LPXTG-cell-wall-anchor-domain-containing-protein
MLTNQTGYRHRLSKQKLPISMVSCLLGMGVFISPTSISADSPPTITIKSAADKDISSNLPKIPLSNAKPEEKLEDTPQLPNEKGYGNDIRDLGKPEDLPKLPDEKGYGNDIRKPEKTPELPNEKGQGDDLKKEEDLKKQRKELTEKLRGLKTVEEVLEFLKMPIPGFVTDVDWQFLMAFVEKGTANKTFEKDKLTLLDIYSTSSGHMIWLGYLVPEKPEPMPEPKPEPKPMPKPEPKPMPKPEPKPMPEPKPMPEPKPMPEPKPMPKPEPKPMPEPKPMPEPKPMPKPEPMPKPEPKPEPMPKPEPMPKPEAQKGDKPAVPKAMEHKLPSTGEATAPFFTAAALAVLASLGVAVVSRKRKKH
>NZ_CP046040.1|WP_021320653.1|923038_924217_+|YSIRK-type-signal-peptide-containing-protein
MKKQSFTHSRKPKFGMRKLSIGLASCMLGMMFLTTSHVSGEVVEVWPYGQNPNGKTEILSQTEDSESSQRLRDIEDFQAEKKMQNVVYTKWLDGVDVKDHDFRKIVDGNIAYYATPLLNGRGFYDINKDFNRDSDKCAAAVAANMFHYWLDINRDNVDRFLRQNPEKHGIIELPDGQLKLSDFLNTYESDHGYRDKSKLFDFISNNFNGPVWTDKLLDNYINGYAYNYKYGRTIEDPTKNTSKINFFKEVFNEKILTNNHSIRNQNEFSVLLSEALYTGKAIGLSYGPAGLRHSLGHIISVWGADLDADGNVVAIYVTDSDDKKLTIGDERVGLKRYKISTDDENRLRLTAYEETHNTGGQIRGLWTLDTGKYAWADYFDKTEQTGTDQAEQ
>NZ_CP046040.1|WP_012678098.1|921914_922724_+|class-C-sortase
MKKSVIFWSVILVAGCLIVLYPTLSNYWNAQHQSQLIADYISSTQALRHKDSQLMLEAANQYNQQLKANHDPDLTLTDSEAEAYQQQLDLTNTGIMAYIDIPKVHERLPIYHGTDEEILQVAIGHLAGTSLPVGGKGTHAVISGHRGLPSAKLFTNIDKLRINDTFTITSLNRTMTYQVDKIATVLPDDVSLLRIEEGKDLVTLVTCTPYGVNTHRLLVRGHRIKTATPAAARGSQKPSRLILWLLLISALGLSLVLIGTWRWRRRSKA
>NZ_CP046040.1|WP_014622736.1|920391_921834_+|isopeptide-forming-domain-containing-fimbrial-protein
MKTIKLILTSLLVTFLTMLSGKAFADTASYTITVEGATAGHTYEAYQIFKGDLFDSTLSNITWGGGVTPFEFDGSKDAAKIAEGLKEANAAAFAKEAGKHLTATIAGTGTHAITVNEAGYYLIKDKNDSQTGKHDAYTSFVLKVVKNTSFKPKSAIPTVLKKVKDRNDKTGLETGWQDSADYDKNDKVPFQLTATLPSNYDAFQEYYLEFVDTLSAGLSYNKDAKVYVVNGDSRQEITGSFTINDAGSSFKINNLKAVQGVTITATSKIVVEYTATLNDQAAIGKKGNPNEVALKYSNDPNALGKGEESPKGETPKDKVIVFTYKTIINKVDQDQKALKGAGFTLYKLVKGDNGEEKYQIVQEIKAGDTTSFEFVGLDAGDYKLSETTTPGGYNTIADVMFSIVAQHETESDDPQLTSLTVDKATGFTADTEAGTVSATIVNKKGSILPSTGSIGTTMLYVFGVMLMTISTLFIFRQKQQ
>NZ_CP046040.1|WP_041788229.1|918406_920377_+|Cna-B-type-domain-containing-protein
MKQLTKIVSIVLLLLLTLSASLPKVRATNISDNITSLTVASSSLRDGERTTVKVEFDAKSAKIKDGDIIEVTWPTSGNVYIQGFAKTIPLSIQNIDVGTLEVTTTKATFKFNKNIETVDNVTGWGEFEILARNVTQTDQENTGTAVVKVGNHTVPIEIVKPETGTGTGSFYYKTGDIQPNDTDHVRWFLSINNNKEWIKGTVRIEDDIQAGQWLQMDSFDITVSGYQNERFVGANALSDFHQKFPRSTITADEYSGHISVNLDSQDVLYNSIVIAYKTQITNYDQKEFANNSTIWYQKLYSDNETKSESNYQVANVNANGGVDGSRYTFFFVKKVWEDQGDKDGKRPKNIKVQLYANNKEVEGKVIELNADNRWQASFGKLDKYDSQNQKITYSVKEVTVPAGYQSQVEGDSGVGFTITNTYTPEMISINGQKTWDDKENQDGKRPDQITVRLLANNVATGDVTTASVKTGWKYTFTNLPKYKDGKQITYTIQEDPVADYTTTIQGFDITNHHEVALTSLKVIKAWNDKDDYYHKRPKEITILLKADGKVIREHQMTPDQQGKWEYTFDKLPVYQAGKKISYSIEEKQVAGYQAPVYDINEDLNQVTVTNTINQSYSLPDTGGQGVKWYLLIGGSIITVACLVLINLYKKHKHHNM
>NZ_CP046040.1|WP_049780494.1|917744_918320_-|TetR/AcrR-family-transcriptional-regulator
MYKININVQFLGVNDTMDKNKQTCKKIIKNYCRLLQYKDKDSITVSDISKASNISRTTFYHYFNSKKDLDREMIGVYLDDITSIIYQSPSLDTTIILKILNYLSDNQEVMQSLILYYPNIYKIFNHYIRDIISYSNLMNCAESQDYPEVTQKYVFELYIASIEVIIIKWISCGCKESPQQIIEVLKLLRSN
>NZ_CP046040.1|WP_014622742.1|931957_932497_+|RNA-polymerase-sigma-factor
MIKGVLRGDKLLEFEDIYLEYKDDVYRFVNKLCCYQNSLSDDITQETFLKAYRNIAKFRGDSSIKTWLFTIAKNTFFTEIKKKKYENMSMESLEIVDAKEHDEPLDKIERRELLEITLTIIFNLPEKMQAVFLARIYSGDSYEKIAKDIGITVSSAKVLVFRARKHIKRQLREEYGYEV
>NZ_CP046040.1|WP_014622743.1|932486_933122_+|membrane-protein
MRYDCELIQDLLPLYVDDTLSDYSRAVVEAHLTSCKDCQIDLADLRQDYSKVEEELQEYQAEVCAFSRFIRKQRQQMIVATISICLVTGILSSILTAHRIQAPYDYVAIDVGEHTQLNKEGLLSTARTTAKDHVALVYKHKAQKVNGSFEISELQARKIQQQLKQAMLKEANATDISSRQLDQSQKRLSCNQDDQLVYIISTDGRIYYFGR
>NZ_CP046040.1|WP_148255839.1|933249_933945_+|VTC-domain-containing-protein
MNEVLRQEKKYLITIEDYYRLSHEFSKLLRLDAHSSSEGYVIRSLYFDSLEDVDWQEKEDGIELRRKIRLRNYGSQSSFAKLEMKQKQGSNQKKRSLRLTRVDAQLLIKGDRSILLTYPDRFAAECYSRMSMQLYQPKTVIEYQRKAFVAKENNIRITFDHHIIGSETNADIFSDHLPQNYLLDPYLVILEVKYNGFLLSYIKKLLESVNGSELSASKYCMGRAISKHYRF
>NZ_CP046040.1|WP_014622745.1|933958_934636_+|DUF4956-domain-containing-protein
MKQLLRHVFEQRGTLSFQDVLLHIVAAALLSVVIYISYAYTHTGTAYSKKFNVSLMTLTVLTATVMTVIGNNVALSLGMVGALSVVRFRTAIKDSRDTVYIFWTIVVGICCGVGDYTVAATGSSVIFLLLLLMGAVRNDNRLLLIVRCDKQMEIELERLVFNYFSGKAIQRVKNTTSDDIEMIFELSRKDYDSTYQQANPLTEAVYQLGRVDYFNIVSQSDDITG
>NZ_CP046040.1|WP_012515458.1|934641_936075_+|hypothetical-protein
MKEKTIYVIVLVCLLLAAICGIGFPKTSAKRIHHHLQTVKKSSRSTGEFSSHLPIISIDTHHQQIPEQREYEGETKRQKTIKTTVSLRDQLDREHSLSESPRLSLTALIAYRGNSSRHFDKKSLKLRFINKSAKPKAVSLAGMSKESEWVLHGPFLDRTLVRNYLSYNIAGEIMTYAPNVRYCELVVDHQYCGLYLAVESIEQGRHRVNIEKSDRKSDKTPYILVWDRRHKAKQALDHYVSYTNQAGLSSLDIKYPSLHRLTPKQKQFIEKDISHIEKLLYSYDLKQYTDYLDQESFADYFIINEFFRNIDAGKFSTYLYKDLRDKLKLVVWDFNNAFDNQIEAPYDEADFTLSDAPWFCMLLKDPSFVKLVVTRYHQLRQNVLSTDYLIKYIDATVAFLGPAIQRNYHKWGYVFTVPSRSDATNYLVPASRNYSSYEASVKQLKDFIRRRGRWLDKHIETLYQYSAPSKNTNTLLE
>NZ_CP046040.1|WP_014622746.1|936081_938223_+|hypothetical-protein
MKKYLIFVGLLLSVIGLSYYCCDIDGRLYLPVSNQSAIRTSFYAKDKRIYDQKGSPYLIKGVDVESSIAGYRQRDLSVDEKTYYRWFKQIAAMGANTIRVRVIMPAAFYHALSRYNDTASHSLYLLQGFRIDAYHDNSSISALDKAYLGTLLREARASVDVIHGRKRIWHSDLGLQHYDQDMSKWLIGYIVGDDWHSGTIAYTNHQNHAKPVGFKGRYYATTPQANRFEAILAEIMEEITSYESRKYGWQHLVSFSNTPQSDPFVYQDPFASQAAKYVQLTIENIKPSAKVKAGLFASYKLLDCHSAYRDYLLFDRLGLDDRLVGDIKRMPLYQGYVKLLTSYHRVPVVVTGYGYSTARGVDQMISTSSPLTEKDQGERLMADYTAFIASGCCGATIHSWQDDWTARSWNTSFATNKHQSFLWGDVQSKAQGYGLLTFEHAPRTHAIDGQKAADEWSRALTYKKNGQQLLVDQDEKYLYIAIESTKKQPLQRQWLIPLDITPKTGSRVIEGFSARFDRFADFALVVDDHKGSRLLVQERYHATDANYLRQINGKDFYVFPPNKHTPRFTMVDMVVRNDGIFAAIDQVPIAKRGLKRYPTGQLKQGNGKRGSAHFDSQTDISFGERLIELRIPWQLLNFSDPASNKIHDDYFEHYGVEELAIEAIAIGFAPLKESKVITMIEYPLLSWERPRVREVLKTSYQQVQAVWQEKRRR
>NZ_CP046040.1|WP_014622748.1|938370_939765_+|glycosyltransferase-family-2-protein
MQLLFLVLKYSQYLFLAFLIAYASFLLLSLIVGAIHLYERRQQVPLGGDVSLPPVSILVPAYNEELTIIETVESLLMLDYDCYEIIVIDDGSTDHTAKLLKEQFHLEAVTCSINQRIPTRPLKAVSQKQLKHVKLTLLEKANGGKGDSLNFGINAAQYDYFLCMDADSMLQEDSLKRIAKTVAKDPSVIAVGGMVKVSQGVALAAGRIVDYHLPRQLISCAQAIEYDCAFFGARVLLDQAAGNLIISGAFGLFKKELAIAVDGYDTGTLGEDMELVMKLHFFCQNNKIPYRIGYETDAICWSQAPSRLKDLCQQRRRWFLGLYQCLKKYLQFFVSGRFKVTVLISYVLYLLFELLSPFIEAFGVIIIVLSLLCHQLNTTFFVSLMLLYICYCVLIALTSFLNRVYLQNNSSITFFDMVWVIYAAIYQCLVLHTVLTLVKVSSFIGYQRKKNAWGQITRDKHKAA
>NZ_CP046040.1|WP_038674354.1|939975_943200_+|ATP-dependent-nuclease-subunit-B
MKLLYTEISYSMTEILVKEARAYADKGYRVFYIAPNSLSFEKERSVLALLPEQGSFAITVTRFEQMARYFTLAKAANRQALDDNGLAMIFYRVLMQLQEDELKVFHRLRTDQAFIAQLVELYKELQTANLTAFDLTTLDRPEKQEDLITIMTKAEQLIAQGDYDQSSRLAQLAEAIKSKSLDDELRQTVLVIDGFTRFSAEEEQLLALLNEACEEIVIGAYISQKAYRLAFTKGNLYEASLAFIQQLAQQFQTKPIYTTSEKVFDVSFSRLTQLLEANHDYSQLDWQLSAKDKSKVVIWQALNQKEELEHVTKAIREKLYQGYRYKDMLVLLGDVASYQLQIGPIFEKFEIPYYIGKQEPMSAHPLVQFVESLERGRRYNWRREDIVNLLKSGLFGRFQEGELDQLEQYLVFADIQGFTKFSRPFTLNSSRQYPLPLLNQLRLAVVTPLQQLFKSQKQLGASLLDKLMTFFKTIQLADNFEALAGSRREADREKDEEVWKTFTGILETFYQVFGQEKMTLADCLALIKMGMQTAHYRTVPATLDVVSIKSYDLVEPHSKPFVFAIGLSRSHFPKQTKNTSLISDQERASINEQTASYQRLDVPSFENIKKNHQTALSLFNAATQELVLSLPTSLTNSSDDVSPYLKELIALGVPVIEKGKNRLSHSAADIGNYKALLSRLVAINRQGIADDMTSEDRNFWTVALRYLKRRLADEQLSLPAFEHHLTTKPVAPEVIETRFPSQQPLSLSSSALTVFYNNQYKYFLKYVLGLQEPESIHPDARIHGQYLHRIFELVTKDRSNAAFDQKLGAAIAAVNQQSAFQQVYQADAEGRYSLEVLKGIAYSTAPVLNLNQGMQVAKQEEAFELALGHQALIRGVIDRIDQLADGRLGIVDYKSSARVFDIGAFYNGLSPQLVTYLAALKNKGQGLFGAMYLHMQEPRLSLSDFKVLDDQLVAAAYKELTYKGIFLAQAKEYLANGSYHLNNTLYETDELETLLAYNEQLYLSAVKQIKTGHFLINPYTADGKSVQGDQLKAITRFEADLDLGYARRLVVLPAKERRQAFLTRMNEEIKHEDW
>NZ_CP046040.1|WP_014622750.1|943186_946828_+|helicase-exonuclease-AddAB-subunit-AddA
MRIGEGFLTPEAIARLQQEEALSDKRHKRTAQQIEAIYSSGQNILVSASAGSGKTFVMVERILDKILRGISVDRLFISTFTVKAATELIERIEKKLHTAIAETQDYQLKAYLNDQLQALSQADIGTMDAFAQKLVHQHGYVLGISPHFRIIQDKAEQDILKREVFRQVFEDYMSQTDNKAFIQLVQNFSGRRKDSSAFREIVDSIYAFSQSTANPSSWLAEVFLRGAKTYTSFADIPDQVVDALLACMQDTADQLRDLTDMEGYAQTTKAGKLTAKYTKHLKMIDSLYEWALHFDSLYGKARLGQLAQELTALLPSGADITVAGHKYPIFKSLQEQLVGFRHLETILAYQQESLPLLEVLQAFVISFSEAYLAAKMQENAFEFSDIAHFAIEILQQAPDIRQAYQGHYHEVMVDEYQDNNHMQERLLELLSNGHNRFMVGDIKQSIYRFRQADPQIFNQKFKDYQSNPEHGKLILLKENFRSQSEVLNVTNAVFSRLMDESLGEITYDDKHQLVAGSEAQKQLHPENRAQLLLYNTDQAQEGTEEASTNDGISAGEVTLVAKEIIRLYNEEKVAFEDITLLVSSRTRNDTIFQVFNQYGIPLVADGGQENYLKSVEVMVMLDTLRSINNPLNDYALVALMRSPMFSFDEDQLARISLQSSSQDQPQAFYDKLSNSLRGQGEHPGLIGQELMTKLVDFDRTLRDWRQFAKLHSLYELIWKIFNDRFYFDFVASQPKAEQAQANLYALAIRADQFEQSGYKGLSRFIGMIDKVLETQNDLADVEVERPKHAVNLMTIHKSKGLEFHYVFILNCDKRFAMADLQAPIILNRDEGIGIKYVANVKELLRDEKLASLKVTMETLPYQLNKQQLRLATLSEQMRLLYVAMTRAEKKVYLVGKASKEKIQAKTADNSSEGRLALASRERLLSFQDWLLAITATFSKEDLFIDVRFVDDSDLTAEAVGQLRSSGLLQADDLKDNRQTEDIARALDMLDKVSKLNASYQAAIELPTVRTPSQLKTLYEPLMDTDGVDIIDQPYHRPKTFELPDFSKKKAVEPSQVGSSLHELMQRIPMSDQVTAGDIEQALQLVSADAEVKARLDIEKVTSFFATTELGQLLQEHHQRLHREAPFAMLKKDSLSQEQYVVRGIIDGYLLFEDRIVLFDYKTDHYQHSAELKQRYQQQMDLYAEALSQSYGIAKVEKYLVLMGGPQLEVVRLA
>NZ_CP046040.1|WP_014622751.1|947090_948215_+|aminotransferase
MKLPVFGVEEWLNQHEKSAVYDIAGSSIASLTLEELFDLTQEQPQAFYQQLHQKPLDYGWIEGSPDFKQAVAGLYQQQKARNILQTNGATGANFLVIYALLEAGDHVIAHYPSYQQLYDIPASLGVEVDYWQTREDQAWLPDLNELGAMIRPNTKMIMINNANNPTGAYMTKPYLEELINIAREHDIYLLSDEVYHSFTSDHLLAVADLYDKGISVNSMSKTFSIPGIRVGWVAASETICDQLRLYRDYTMICAGVFDDMVASLALKHADKLLQRNQAIIRTNLAILEDWITGEAKASYIKPSEVSTAFVRLDIDEDIEAFALRLLEDYGTLVVPGNRFNQANHVRIGYCCQPQVLQAGLSRLSQCLKKYSTKA

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP046040_1	1.3\|500813\|24\|NZ_CP046040\|CRT	500813-500836	24	NZ_CP046040.1	1545470-1545493	1	0.958
NZ_CP046040_1	1.3\|500813\|24\|NZ_CP046040\|CRT	500813-500836	24	NZ_CP046040.1	924984-925007	2	0.917
NZ_CP046040_1	1.3\|500813\|24\|NZ_CP046040\|CRT	500813-500836	24	NZ_CP046040.1	925008-925031	2	0.917
NZ_CP046040_1	1.3\|500813\|24\|NZ_CP046040\|CRT	500813-500836	24	NZ_CP046040.1	925086-925109	2	0.917
NZ_CP046040_1	1.3\|500813\|24\|NZ_CP046040\|CRT	500813-500836	24	NZ_CP046040.1	925164-925187	2	0.917
NZ_CP046040_1	1.9\|501191\|18\|NZ_CP046040\|CRT	501191-501208	18	NZ_CP046040.1	485948-485965	2	0.889
NZ_CP046040_1	1.9\|501191\|18\|NZ_CP046040\|CRT	501191-501208	18	NZ_CP046040.1	1545464-1545481	2	0.889

1. spacer 1.3|500813|24|NZ_CP046040|CRT matches to position: 1545470-1545493, mismatch: 1, identity: 0.958

cttaggctctagtttaggcattgg	CRISPR spacer
cttaggctctggtttaggcattgg	Protospacer
**********.*************

2. spacer 1.3|500813|24|NZ_CP046040|CRT matches to position: 924984-925007, mismatch: 2, identity: 0.917

cttaggctctagtttaggcattgg	CRISPR spacer
cttaggctctggcttaggcattgg	Protospacer
**********.*.***********

3. spacer 1.3|500813|24|NZ_CP046040|CRT matches to position: 925008-925031, mismatch: 2, identity: 0.917

cttaggctctagtttaggcattgg	CRISPR spacer
cttaggctctggcttaggcattgg	Protospacer
**********.*.***********

4. spacer 1.3|500813|24|NZ_CP046040|CRT matches to position: 925086-925109, mismatch: 2, identity: 0.917

cttaggctctagtttaggcattgg	CRISPR spacer
cttaggctctggcttaggcattgg	Protospacer
**********.*.***********

5. spacer 1.3|500813|24|NZ_CP046040|CRT matches to position: 925164-925187, mismatch: 2, identity: 0.917

cttaggctctagtttaggcattgg	CRISPR spacer
cttaggctctggcttaggcattgg	Protospacer
**********.*.***********

6. spacer 1.9|501191|18|NZ_CP046040|CRT matches to position: 485948-485965, mismatch: 2, identity: 0.889

tttaggcattggttctgg	CRISPR spacer
ttaaggcattggttcagg	Protospacer
** ************ **

7. spacer 1.9|501191|18|NZ_CP046040|CRT matches to position: 1545464-1545481, mismatch: 2, identity: 0.889

tttaggcattggttctgg	CRISPR spacer
tttaggcattggctcagg	Protospacer
************.** **

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP046040_2	2.2\|563585\|33\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	563585-563617	33	MK448824	Streptococcus phage Javan637, complete genome	15562-15594	0	1.0
NZ_CP046040_2	2.2\|563585\|33\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	563585-563617	33	MK448761	Streptococcus phage Javan445, complete genome	16297-16329	0	1.0
NZ_CP046040_2	2.2\|563585\|33\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	563585-563617	33	MK449002	Streptococcus phage Javan642, complete genome	15517-15549	0	1.0
NZ_CP046040_2	2.2\|563585\|33\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	563585-563617	33	MK448760	Streptococcus phage Javan443, complete genome	16297-16329	0	1.0
NZ_CP046040_2	2.2\|563585\|33\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	563585-563617	33	MK449003	Streptococcus phage Javan648, complete genome	15517-15549	0	1.0
NZ_CP046040_2	2.6\|563848\|35\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	563848-563882	35	MK448864	Streptococcus phage Javan180, complete genome	21569-21603	0	1.0
NZ_CP046040_2	2.8\|563981\|34\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	563981-564014	34	MK448862	Streptococcus phage Javan178, complete genome	2943-2976	0	1.0
NZ_CP046040_2	2.8\|563981\|34\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	563981-564014	34	MK448865	Streptococcus phage Javan182, complete genome	2115-2148	0	1.0
NZ_CP046040_2	2.10\|564114\|34\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	564114-564147	34	MK448767	Streptococcus phage Javan467, complete genome	2034-2067	0	1.0
NZ_CP046040_2	2.10\|564114\|34\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	564114-564147	34	MK448771	Streptococcus phage Javan481, complete genome	2034-2067	0	1.0
NZ_CP046040_2	2.10\|564114\|34\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	564114-564147	34	MK448942	Streptococcus phage Javan448, complete genome	2034-2067	0	1.0
NZ_CP046040_2	2.10\|564114\|34\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	564114-564147	34	NC_004586	Streptococcus pyogenes phage 315.3, complete genome	2139-2172	0	1.0
NZ_CP046040_2	2.10\|564114\|34\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	564114-564147	34	MK448964	Streptococcus phage Javan502, complete genome	2034-2067	0	1.0
NZ_CP046040_2	2.10\|564114\|34\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	564114-564147	34	MK448943	Streptococcus phage Javan450, complete genome	2034-2067	0	1.0
NZ_CP046040_2	2.10\|564114\|34\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	564114-564147	34	MK448972	Streptococcus phage Javan520, complete genome	2034-2067	0	1.0
NZ_CP046040_2	2.10\|564114\|34\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	564114-564147	34	MK448786	Streptococcus phage Javan509, complete genome	2034-2067	0	1.0
NZ_CP046040_2	2.10\|564114\|34\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	564114-564147	34	MK448774	Streptococcus phage Javan487, complete genome	2034-2067	0	1.0
NZ_CP046040_2	2.11\|564180\|34\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	564180-564213	34	MK448767	Streptococcus phage Javan467, complete genome	2034-2067	0	1.0
NZ_CP046040_2	2.11\|564180\|34\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	564180-564213	34	MK448771	Streptococcus phage Javan481, complete genome	2034-2067	0	1.0
NZ_CP046040_2	2.11\|564180\|34\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	564180-564213	34	MK448942	Streptococcus phage Javan448, complete genome	2034-2067	0	1.0
NZ_CP046040_2	2.11\|564180\|34\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	564180-564213	34	NC_004586	Streptococcus pyogenes phage 315.3, complete genome	2139-2172	0	1.0
NZ_CP046040_2	2.11\|564180\|34\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	564180-564213	34	MK448964	Streptococcus phage Javan502, complete genome	2034-2067	0	1.0
NZ_CP046040_2	2.11\|564180\|34\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	564180-564213	34	MK448943	Streptococcus phage Javan450, complete genome	2034-2067	0	1.0
NZ_CP046040_2	2.11\|564180\|34\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	564180-564213	34	MK448972	Streptococcus phage Javan520, complete genome	2034-2067	0	1.0
NZ_CP046040_2	2.11\|564180\|34\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	564180-564213	34	MK448786	Streptococcus phage Javan509, complete genome	2034-2067	0	1.0
NZ_CP046040_2	2.11\|564180\|34\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	564180-564213	34	MK448774	Streptococcus phage Javan487, complete genome	2034-2067	0	1.0
NZ_CP046040_2	2.13\|564313\|35\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	564313-564347	35	MK448694	Streptococcus phage Javan179, complete genome	11449-11483	0	1.0
NZ_CP046040_2	2.18\|564641\|33\|NZ_CP046040\|CRISPRCasFinder,CRT	564641-564673	33	MK448960	Streptococcus phage Javan492, complete genome	16598-16630	0	1.0
NZ_CP046040_2	2.18\|564641\|33\|NZ_CP046040\|CRISPRCasFinder,CRT	564641-564673	33	MK448762	Streptococcus phage Javan447, complete genome	16724-16756	0	1.0
NZ_CP046040_2	2.18\|564641\|33\|NZ_CP046040\|CRISPRCasFinder,CRT	564641-564673	33	MK448965	Streptococcus phage Javan506, complete genome	17834-17866	0	1.0
NZ_CP046040_2	2.18\|564641\|33\|NZ_CP046040\|CRISPRCasFinder,CRT	564641-564673	33	MK448791	Streptococcus phage Javan517, complete genome	16373-16405	0	1.0
NZ_CP046040_2	2.18\|564641\|33\|NZ_CP046040\|CRISPRCasFinder,CRT	564641-564673	33	MK448959	Streptococcus phage Javan488, complete genome	17834-17866	0	1.0
NZ_CP046040_2	2.18\|564641\|33\|NZ_CP046040\|CRISPRCasFinder,CRT	564641-564673	33	NC_004587	Streptococcus prophage 315.4, complete genome	16468-16500	0	1.0
NZ_CP046040_2	2.18\|564641\|33\|NZ_CP046040\|CRISPRCasFinder,CRT	564641-564673	33	NC_003157	Streptococcus pyogenes strain NIH1 putative methionine sulfoxide reductase gene, complete cds; and integrated temperate phage PhiNIH1.1, complete genome	17738-17770	0	1.0
NZ_CP046040_2	2.18\|564641\|33\|NZ_CP046040\|CRISPRCasFinder,CRT	564641-564673	33	MK448977	Streptococcus phage Javan530, complete genome	16373-16405	0	1.0
NZ_CP046040_2	2.18\|564641\|33\|NZ_CP046040\|CRISPRCasFinder,CRT	564641-564673	33	MK448949	Streptococcus phage Javan460, complete genome	18494-18526	0	1.0
NZ_CP046040_2	2.18\|564641\|33\|NZ_CP046040\|CRISPRCasFinder,CRT	564641-564673	33	MK448958	Streptococcus phage Javan486, complete genome	16801-16833	0	1.0
NZ_CP046040_2	2.18\|564641\|33\|NZ_CP046040\|CRISPRCasFinder,CRT	564641-564673	33	MK448793	Streptococcus phage Javan523, complete genome	17815-17847	0	1.0
NZ_CP046040_2	2.18\|564641\|33\|NZ_CP046040\|CRISPRCasFinder,CRT	564641-564673	33	MK448788	Streptococcus phage Javan511, complete genome	16373-16405	0	1.0
NZ_CP046040_2	2.18\|564641\|33\|NZ_CP046040\|CRISPRCasFinder,CRT	564641-564673	33	MK448954	Streptococcus phage Javan476, complete genome	16200-16232	0	1.0
NZ_CP046040_2	2.19\|564706\|36\|NZ_CP046040\|CRISPRCasFinder,CRT	564706-564741	36	MK448941	Streptococcus phage Javan446, complete genome	4270-4305	0	1.0
NZ_CP046040_2	2.1\|563520\|33\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	563520-563552	33	MK448862	Streptococcus phage Javan178, complete genome	12499-12531	1	0.97
NZ_CP046040_2	2.2\|563585\|33\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	563585-563617	33	MK448960	Streptococcus phage Javan492, complete genome	13165-13197	1	0.97
NZ_CP046040_2	2.2\|563585\|33\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	563585-563617	33	MK448762	Streptococcus phage Javan447, complete genome	13292-13324	1	0.97
NZ_CP046040_2	2.2\|563585\|33\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	563585-563617	33	MK448862	Streptococcus phage Javan178, complete genome	12050-12082	1	0.97
NZ_CP046040_2	2.2\|563585\|33\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	563585-563617	33	MK448798	Streptococcus phage Javan533, complete genome	14047-14079	1	0.97
NZ_CP046040_2	2.2\|563585\|33\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	563585-563617	33	MK448965	Streptococcus phage Javan506, complete genome	14726-14758	1	0.97
NZ_CP046040_2	2.2\|563585\|33\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	563585-563617	33	MK448955	Streptococcus phage Javan478, complete genome	15318-15350	1	0.97
NZ_CP046040_2	2.2\|563585\|33\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	563585-563617	33	MK448795	Streptococcus phage Javan527, complete genome	19573-19605	1	0.97
NZ_CP046040_2	2.2\|563585\|33\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	563585-563617	33	MK448791	Streptococcus phage Javan517, complete genome	12049-12081	1	0.97
NZ_CP046040_2	2.2\|563585\|33\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	563585-563617	33	MK448953	Streptococcus phage Javan474, complete genome	16662-16694	1	0.97
NZ_CP046040_2	2.2\|563585\|33\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	563585-563617	33	MK448790	Streptococcus phage Javan515, complete genome	13720-13752	1	0.97
NZ_CP046040_2	2.2\|563585\|33\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	563585-563617	33	MK448959	Streptococcus phage Javan488, complete genome	14726-14758	1	0.97
NZ_CP046040_2	2.2\|563585\|33\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	563585-563617	33	NC_004587	Streptococcus prophage 315.4, complete genome	12144-12176	1	0.97
NZ_CP046040_2	2.2\|563585\|33\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	563585-563617	33	MK448945	Streptococcus phage Javan454, complete genome	14942-14974	1	0.97
NZ_CP046040_2	2.2\|563585\|33\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	563585-563617	33	NC_003157	Streptococcus pyogenes strain NIH1 putative methionine sulfoxide reductase gene, complete cds; and integrated temperate phage PhiNIH1.1, complete genome	13414-13446	1	0.97
NZ_CP046040_2	2.2\|563585\|33\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	563585-563617	33	MK448962	Streptococcus phage Javan496, complete genome	6326-6358	1	0.97
NZ_CP046040_2	2.2\|563585\|33\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	563585-563617	33	MK448977	Streptococcus phage Javan530, complete genome	12049-12081	1	0.97
NZ_CP046040_2	2.2\|563585\|33\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	563585-563617	33	MK448949	Streptococcus phage Javan460, complete genome	15386-15418	1	0.97
NZ_CP046040_2	2.2\|563585\|33\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	563585-563617	33	MK448783	Streptococcus phage Javan503, complete genome	12965-12997	1	0.97
NZ_CP046040_2	2.2\|563585\|33\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	563585-563617	33	MK448967	Streptococcus phage Javan510, complete genome	14048-14080	1	0.97
NZ_CP046040_2	2.2\|563585\|33\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	563585-563617	33	MK448854	Streptococcus phage Javan146, complete genome	16298-16330	1	0.97
NZ_CP046040_2	2.2\|563585\|33\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	563585-563617	33	MK448694	Streptococcus phage Javan179, complete genome	15255-15287	1	0.97
NZ_CP046040_2	2.2\|563585\|33\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	563585-563617	33	MK448788	Streptococcus phage Javan511, complete genome	12049-12081	1	0.97
NZ_CP046040_2	2.2\|563585\|33\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	563585-563617	33	NC_004588	Streptococcus prophage 315.5, complete genome	14197-14229	1	0.97
NZ_CP046040_2	2.7\|563915\|34\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	563915-563948	34	MK448958	Streptococcus phage Javan486, complete genome	5985-6018	1	0.971
NZ_CP046040_2	2.8\|563981\|34\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	563981-564014	34	MK448673	Streptococcus phage Javan119, complete genome	3235-3268	1	0.971
NZ_CP046040_2	2.10\|564114\|34\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	564114-564147	34	MK448862	Streptococcus phage Javan178, complete genome	2270-2303	1	0.971
NZ_CP046040_2	2.11\|564180\|34\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	564180-564213	34	MK448862	Streptococcus phage Javan178, complete genome	2270-2303	1	0.971
NZ_CP046040_2	2.17\|564576\|33\|NZ_CP046040\|CRISPRCasFinder,CRT	564576-564608	33	JX409894	Streptococcus phage LYGO9, complete genome	31659-31691	1	0.97
NZ_CP046040_2	2.17\|564576\|33\|NZ_CP046040\|CRISPRCasFinder,CRT	564576-564608	33	JX409895	Streptococcus phage JX01, complete genome	477-509	1	0.97
NZ_CP046040_2	2.18\|564641\|33\|NZ_CP046040\|CRISPRCasFinder,CRT	564641-564673	33	MK448951	Streptococcus phage Javan470, complete genome	16605-16637	1	0.97
NZ_CP046040_1	1.1\|500675\|24\|NZ_CP046040\|CRT	500675-500698	24	NZ_CP047096	Bacillus marisflavi strain 151-25 plasmid p25, complete sequence	79678-79701	2	0.917
NZ_CP046040_1	1.8\|501143\|24\|NZ_CP046040\|CRT	501143-501166	24	NZ_CP015507	Bacillus oceanisediminis 2691 plasmid pBO1, complete sequence	295644-295667	2	0.917
NZ_CP046040_1	1.8\|501143\|24\|NZ_CP046040\|CRT	501143-501166	24	MT774375	CrAssphage cr50_1, complete genome	77141-77164	2	0.917
NZ_CP046040_2	2.2\|563585\|33\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	563585-563617	33	MK448858	Streptococcus phage Javan166, complete genome	16813-16845	2	0.939
NZ_CP046040_2	2.2\|563585\|33\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	563585-563617	33	MK449010	Streptococcus phage Javan90, complete genome	13387-13419	2	0.939
NZ_CP046040_2	2.2\|563585\|33\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	563585-563617	33	MK448775	Streptococcus phage Javan489, complete genome	13868-13900	2	0.939
NZ_CP046040_2	2.2\|563585\|33\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	563585-563617	33	MK448794	Streptococcus phage Javan525, complete genome	12065-12097	2	0.939
NZ_CP046040_2	2.2\|563585\|33\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	563585-563617	33	MK448944	Streptococcus phage Javan452, complete genome	14244-14276	2	0.939
NZ_CP046040_2	2.2\|563585\|33\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	563585-563617	33	MK448793	Streptococcus phage Javan523, complete genome	14004-14036	2	0.939
NZ_CP046040_2	2.2\|563585\|33\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	563585-563617	33	MK448933	Streptococcus phage Javan420, complete genome	16298-16330	2	0.939
NZ_CP046040_2	2.2\|563585\|33\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	563585-563617	33	MK448765	Streptococcus phage Javan459, complete genome	12064-12096	2	0.939
NZ_CP046040_2	2.2\|563585\|33\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	563585-563617	33	MK448833	Streptococcus phage Javan87, complete genome	13387-13419	2	0.939
NZ_CP046040_2	2.2\|563585\|33\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	563585-563617	33	MK448688	Streptococcus phage Javan161, complete genome	16185-16217	2	0.939
NZ_CP046040_2	2.7\|563915\|34\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	563915-563948	34	MK448791	Streptococcus phage Javan517, complete genome	5642-5675	2	0.941
NZ_CP046040_2	2.7\|563915\|34\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	563915-563948	34	NC_004587	Streptococcus prophage 315.4, complete genome	5737-5770	2	0.941
NZ_CP046040_2	2.7\|563915\|34\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	563915-563948	34	NC_003157	Streptococcus pyogenes strain NIH1 putative methionine sulfoxide reductase gene, complete cds; and integrated temperate phage PhiNIH1.1, complete genome	7007-7040	2	0.941
NZ_CP046040_2	2.7\|563915\|34\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	563915-563948	34	MK448977	Streptococcus phage Javan530, complete genome	5642-5675	2	0.941
NZ_CP046040_2	2.7\|563915\|34\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	563915-563948	34	MK448788	Streptococcus phage Javan511, complete genome	5642-5675	2	0.941
NZ_CP046040_2	2.15\|564445\|33\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	564445-564477	33	MK448862	Streptococcus phage Javan178, complete genome	11566-11598	2	0.939
NZ_CP046040_1	1.8\|501143\|24\|NZ_CP046040\|CRT	501143-501166	24	MK962756	Shigella phage JK42, complete genome	73788-73811	3	0.875
NZ_CP046040_1	1.8\|501143\|24\|NZ_CP046040\|CRT	501143-501166	24	NZ_CP047096	Bacillus marisflavi strain 151-25 plasmid p25, complete sequence	79726-79749	3	0.875
NZ_CP046040_1	1.8\|501143\|24\|NZ_CP046040\|CRT	501143-501166	24	NZ_CP047096	Bacillus marisflavi strain 151-25 plasmid p25, complete sequence	79762-79785	3	0.875
NZ_CP046040_1	1.8\|501143\|24\|NZ_CP046040\|CRT	501143-501166	24	NZ_CP047096	Bacillus marisflavi strain 151-25 plasmid p25, complete sequence	79786-79809	3	0.875
NZ_CP046040_1	1.8\|501143\|24\|NZ_CP046040\|CRT	501143-501166	24	NZ_CP039693	Agrobacterium larrymoorei strain CFBP5473 plasmid pAlCFBP5473, complete sequence	32895-32918	3	0.875
NZ_CP046040_1	1.8\|501143\|24\|NZ_CP046040\|CRT	501143-501166	24	NZ_CP020748	Bacillus mycoides strain Gnyt1 plasmid unnamed5, complete sequence	15264-15287	3	0.875
NZ_CP046040_1	1.8\|501143\|24\|NZ_CP046040\|CRT	501143-501166	24	NZ_CP020748	Bacillus mycoides strain Gnyt1 plasmid unnamed5, complete sequence	15312-15335	3	0.875
NZ_CP046040_1	1.8\|501143\|24\|NZ_CP046040\|CRT	501143-501166	24	NZ_CP020748	Bacillus mycoides strain Gnyt1 plasmid unnamed5, complete sequence	15348-15371	3	0.875
NZ_CP046040_1	1.8\|501143\|24\|NZ_CP046040\|CRT	501143-501166	24	NZ_CP020748	Bacillus mycoides strain Gnyt1 plasmid unnamed5, complete sequence	15372-15395	3	0.875
NZ_CP046040_1	1.8\|501143\|24\|NZ_CP046040\|CRT	501143-501166	24	NZ_CP020748	Bacillus mycoides strain Gnyt1 plasmid unnamed5, complete sequence	15384-15407	3	0.875
NZ_CP046040_1	1.8\|501143\|24\|NZ_CP046040\|CRT	501143-501166	24	NZ_CP020748	Bacillus mycoides strain Gnyt1 plasmid unnamed5, complete sequence	15408-15431	3	0.875
NZ_CP046040_1	1.8\|501143\|24\|NZ_CP046040\|CRT	501143-501166	24	NZ_CP020748	Bacillus mycoides strain Gnyt1 plasmid unnamed5, complete sequence	15468-15491	3	0.875
NZ_CP046040_1	1.8\|501143\|24\|NZ_CP046040\|CRT	501143-501166	24	NZ_CP020748	Bacillus mycoides strain Gnyt1 plasmid unnamed5, complete sequence	15492-15515	3	0.875
NZ_CP046040_1	1.8\|501143\|24\|NZ_CP046040\|CRT	501143-501166	24	NZ_CP020748	Bacillus mycoides strain Gnyt1 plasmid unnamed5, complete sequence	15504-15527	3	0.875
NZ_CP046040_1	1.8\|501143\|24\|NZ_CP046040\|CRT	501143-501166	24	NZ_CP020748	Bacillus mycoides strain Gnyt1 plasmid unnamed5, complete sequence	15528-15551	3	0.875
NZ_CP046040_1	1.8\|501143\|24\|NZ_CP046040\|CRT	501143-501166	24	NZ_CP020748	Bacillus mycoides strain Gnyt1 plasmid unnamed5, complete sequence	15552-15575	3	0.875
NZ_CP046040_1	1.8\|501143\|24\|NZ_CP046040\|CRT	501143-501166	24	NZ_CP020748	Bacillus mycoides strain Gnyt1 plasmid unnamed5, complete sequence	15600-15623	3	0.875
NZ_CP046040_1	1.8\|501143\|24\|NZ_CP046040\|CRT	501143-501166	24	NZ_CP020748	Bacillus mycoides strain Gnyt1 plasmid unnamed5, complete sequence	15624-15647	3	0.875
NZ_CP046040_1	1.8\|501143\|24\|NZ_CP046040\|CRT	501143-501166	24	NZ_CP020748	Bacillus mycoides strain Gnyt1 plasmid unnamed5, complete sequence	15660-15683	3	0.875
NZ_CP046040_1	1.8\|501143\|24\|NZ_CP046040\|CRT	501143-501166	24	NZ_CP020748	Bacillus mycoides strain Gnyt1 plasmid unnamed5, complete sequence	15720-15743	3	0.875
NZ_CP046040_1	1.8\|501143\|24\|NZ_CP046040\|CRT	501143-501166	24	NZ_CP020748	Bacillus mycoides strain Gnyt1 plasmid unnamed5, complete sequence	15744-15767	3	0.875
NZ_CP046040_1	1.8\|501143\|24\|NZ_CP046040\|CRT	501143-501166	24	NZ_CP020748	Bacillus mycoides strain Gnyt1 plasmid unnamed5, complete sequence	15756-15779	3	0.875
NZ_CP046040_1	1.8\|501143\|24\|NZ_CP046040\|CRT	501143-501166	24	NZ_CP011157	Bacillus cereus strain HN001 plasmid pRML02, complete sequence	9275-9298	3	0.875
NZ_CP046040_1	1.8\|501143\|24\|NZ_CP046040\|CRT	501143-501166	24	NZ_CP011157	Bacillus cereus strain HN001 plasmid pRML02, complete sequence	9299-9322	3	0.875
NZ_CP046040_1	1.8\|501143\|24\|NZ_CP046040\|CRT	501143-501166	24	NZ_CP011157	Bacillus cereus strain HN001 plasmid pRML02, complete sequence	9323-9346	3	0.875
NZ_CP046040_1	1.8\|501143\|24\|NZ_CP046040\|CRT	501143-501166	24	NZ_CP011157	Bacillus cereus strain HN001 plasmid pRML02, complete sequence	9347-9370	3	0.875
NZ_CP046040_1	1.8\|501143\|24\|NZ_CP046040\|CRT	501143-501166	24	NZ_CP011157	Bacillus cereus strain HN001 plasmid pRML02, complete sequence	9431-9454	3	0.875
NZ_CP046040_1	1.8\|501143\|24\|NZ_CP046040\|CRT	501143-501166	24	NZ_CP011157	Bacillus cereus strain HN001 plasmid pRML02, complete sequence	9515-9538	3	0.875
NZ_CP046040_1	1.8\|501143\|24\|NZ_CP046040\|CRT	501143-501166	24	NC_007807	Pseudomonas phage 119X, complete genome	40879-40902	3	0.875
NZ_CP046040_1	1.8\|501143\|24\|NZ_CP046040\|CRT	501143-501166	24	DQ163914	Bacteriophage 119X, complete genome	40879-40902	3	0.875
NZ_CP046040_1	1.8\|501143\|24\|NZ_CP046040\|CRT	501143-501166	24	NZ_CP032411	Brevibacillus laterosporus strain E7593-50 plasmid pAZOBL1, complete sequence	82518-82541	3	0.875
NZ_CP046040_1	1.8\|501143\|24\|NZ_CP046040\|CRT	501143-501166	24	NZ_CP032411	Brevibacillus laterosporus strain E7593-50 plasmid pAZOBL1, complete sequence	82542-82565	3	0.875
NZ_CP046040_1	1.8\|501143\|24\|NZ_CP046040\|CRT	501143-501166	24	KX196154	Shewanella phage SFCi1, complete genome	8431-8454	3	0.875
NZ_CP046040_1	1.8\|501143\|24\|NZ_CP046040\|CRT	501143-501166	24	KX196154	Shewanella phage SFCi1, complete genome	8443-8466	3	0.875
NZ_CP046040_1	1.8\|501143\|24\|NZ_CP046040\|CRT	501143-501166	24	MN693766	Marine virus AFVG_250M849, complete genome	26807-26830	3	0.875
NZ_CP046040_2	2.2\|563585\|33\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	563585-563617	33	MK448672	Streptococcus phage Javan117, complete genome	11451-11483	3	0.909
NZ_CP046040_2	2.2\|563585\|33\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	563585-563617	33	MK448849	Streptococcus phage Javan128, complete genome	11000-11032	3	0.909
NZ_CP046040_2	2.15\|564445\|33\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	564445-564477	33	MK448673	Streptococcus phage Javan119, complete genome	14700-14732	3	0.909
NZ_CP046040_2	2.15\|564445\|33\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	564445-564477	33	MK448672	Streptococcus phage Javan117, complete genome	11067-11099	3	0.909
NZ_CP046040_2	2.15\|564445\|33\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	564445-564477	33	MK448849	Streptococcus phage Javan128, complete genome	10616-10648	3	0.909
NZ_CP046040_2	2.15\|564445\|33\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	564445-564477	33	MK448850	Streptococcus phage Javan132, complete genome	15441-15473	3	0.909
NZ_CP046040_1	1.3\|500813\|24\|NZ_CP046040\|CRT	500813-500836	24	KY883654	Vibrio phage JSF10, complete genome	21111-21134	4	0.833
NZ_CP046040_1	1.3\|500813\|24\|NZ_CP046040\|CRT	500813-500836	24	NC_047882	Vibrio phage JSF12, complete genome	12861-12884	4	0.833
NZ_CP046040_2	2.15\|564445\|33\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	564445-564477	33	MK448858	Streptococcus phage Javan166, complete genome	16007-16039	4	0.879
NZ_CP046040_2	2.15\|564445\|33\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	564445-564477	33	MK448859	Streptococcus phage Javan170, complete genome	15507-15539	4	0.879
NZ_CP046040_2	2.15\|564445\|33\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	564445-564477	33	MK448690	Streptococcus phage Javan169, complete genome	14766-14798	4	0.879
NZ_CP046040_2	2.15\|564445\|33\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	564445-564477	33	MK448688	Streptococcus phage Javan161, complete genome	15461-15493	4	0.879
NZ_CP046040_2	2.15\|564445\|33\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	564445-564477	33	MK448848	Streptococcus phage Javan126, complete genome	10100-10132	5	0.848
NZ_CP046040_2	2.15\|564445\|33\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	564445-564477	33	MK448857	Streptococcus phage Javan164, complete genome	10100-10132	5	0.848
NZ_CP046040_2	2.15\|564445\|33\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	564445-564477	33	MK448677	Streptococcus phage Javan133, complete genome	11092-11124	5	0.848
NZ_CP046040_2	2.15\|564445\|33\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	564445-564477	33	MK448679	Streptococcus phage Javan137, complete genome	9683-9715	5	0.848
NZ_CP046040_2	2.15\|564445\|33\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	564445-564477	33	MK448682	Streptococcus phage Javan143, complete genome	11680-11712	5	0.848
NZ_CP046040_2	2.15\|564445\|33\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	564445-564477	33	MK448845	Streptococcus phage Javan118, complete genome	12101-12133	6	0.818
NZ_CP046040_2	2.15\|564445\|33\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	564445-564477	33	NZ_CP035749	Leuconostoc mesenteroides strain SRCM103460 plasmid unnamed3, complete sequence	6398-6430	6	0.818
NZ_CP046040_3	3.2\|574458\|42\|NZ_CP046040\|CRISPRCasFinder	574458-574499	42	MK448862	Streptococcus phage Javan178, complete genome	12712-12753	6	0.857
NZ_CP046040_2	2.5\|563783\|33\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	563783-563815	33	NZ_CP024405	Borrelia miyamotoi strain Izh-4 plasmid pIzh4-lp18-1, complete sequence	19-51	7	0.788
NZ_CP046040_2	2.13\|564313\|35\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	564313-564347	35	KX077889	Streptococcus phage phiZJ20091101-1, complete genome	12512-12546	7	0.8
NZ_CP046040_2	2.13\|564313\|35\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	564313-564347	35	MK448813	Streptococcus phage Javan579, complete genome	11356-11390	7	0.8
NZ_CP046040_2	2.8\|563981\|34\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	563981-564014	34	NZ_CP013769	Piscirickettsia salmonis strain PM23019A plasmid p1PS3, complete sequence	31720-31753	8	0.765
NZ_CP046040_2	2.8\|563981\|34\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	563981-564014	34	NZ_CP038953	Piscirickettsia salmonis strain Psal-040 plasmid unnamed1, complete sequence	32701-32734	8	0.765
NZ_CP046040_2	2.8\|563981\|34\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	563981-564014	34	NZ_CP039042	Piscirickettsia salmonis strain Psal-072 plasmid unnamed2, complete sequence	134800-134833	8	0.765
NZ_CP046040_2	2.10\|564114\|34\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	564114-564147	34	MG592452	Vibrio phage 1.076.O._10N.286.51.B7, partial genome	39706-39739	8	0.765
NZ_CP046040_2	2.10\|564114\|34\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	564114-564147	34	MG592580	Vibrio phage 1.210.O._10N.222.52.C2, partial genome	38427-38460	8	0.765
NZ_CP046040_2	2.11\|564180\|34\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	564180-564213	34	MG592452	Vibrio phage 1.076.O._10N.286.51.B7, partial genome	39706-39739	8	0.765
NZ_CP046040_2	2.11\|564180\|34\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	564180-564213	34	MG592580	Vibrio phage 1.210.O._10N.222.52.C2, partial genome	38427-38460	8	0.765
NZ_CP046040_2	2.3\|563650\|35\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	563650-563684	35	AP014503	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S42-C30, * SEQUENCING IN PROGRESS *, 2 ordered pieces	3937-3971	9	0.743
NZ_CP046040_2	2.10\|564114\|34\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	564114-564147	34	MN693085	Marine virus AFVG_25M85, complete genome	7745-7778	9	0.735
NZ_CP046040_2	2.11\|564180\|34\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	564180-564213	34	MN693085	Marine virus AFVG_25M85, complete genome	7745-7778	9	0.735
NZ_CP046040_2	2.13\|564313\|35\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	564313-564347	35	KC348598	Streptococcus phage phi20c, complete genome	20594-20628	9	0.743
NZ_CP046040_2	2.13\|564313\|35\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	564313-564347	35	MK448803	Streptococcus phage Javan551, complete genome	12798-12832	9	0.743
NZ_CP046040_2	2.13\|564313\|35\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	564313-564347	35	MK448982	Streptococcus phage Javan554, complete genome	12127-12161	9	0.743
NZ_CP046040_2	2.13\|564313\|35\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	564313-564347	35	MK448981	Streptococcus phage Javan548, complete genome	12798-12832	9	0.743
NZ_CP046040_2	2.13\|564313\|35\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	564313-564347	35	MK448810	Streptococcus phage Javan573, complete genome	13398-13432	9	0.743
NZ_CP046040_2	2.14\|564380\|33\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	564380-564412	33	NZ_CP054028	Rhizobium sp. JKLM19E plasmid pPR19E01, complete sequence	1249133-1249165	9	0.727
NZ_CP046040_2	2.15\|564445\|33\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	564445-564477	33	NZ_CP017076	Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence	1060548-1060580	9	0.727
NZ_CP046040_2	2.19\|564706\|36\|NZ_CP046040\|CRISPRCasFinder,CRT	564706-564741	36	CP027117	Bacillus phage EZ-2018a, complete genome	52673-52708	9	0.75
NZ_CP046040_2	2.2\|563585\|33\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	563585-563617	33	NZ_CP017997	Lactobacillus crustorum strain MN047 plasmid unnamed1, complete sequence	16992-17024	10	0.697
NZ_CP046040_2	2.13\|564313\|35\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	564313-564347	35	NZ_CP032824	Arcobacter cryaerophilus ATCC 43158 plasmid pACRY43158, complete sequence	49369-49403	11	0.686
NZ_CP046040_2	2.13\|564313\|35\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	564313-564347	35	NZ_MK715471	Arcobacter cryaerophilus strain M830MA plasmid pM830MA, complete sequence	158339-158373	11	0.686
NZ_CP046040_2	2.16\|564510\|34\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	564510-564543	34	MK721197	Enterococcus phage vB_EfaP_Efmus2, complete genome	17032-17065	11	0.676
NZ_CP046040_2	2.16\|564510\|34\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	564510-564543	34	JQ309827	Enterococcus phage vB_Efae230P-4, complete genome	1518-1551	11	0.676
NZ_CP046040_2	2.16\|564510\|34\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	564510-564543	34	NC_028693	Enterococcus phage vB_EfaP_IME195, complete genome	17079-17112	11	0.676
NZ_CP046040_2	2.16\|564510\|34\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	564510-564543	34	NC_049933	Enterococcus phage vB_EfaP_Ef6.3, complete genome	16627-16660	11	0.676
NZ_CP046040_2	2.16\|564510\|34\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	564510-564543	34	LT630001	Enterococcus phage Idefix genome assembly, chromosome: IDF	16612-16645	11	0.676
NZ_CP046040_2	2.16\|564510\|34\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	564510-564543	34	MK721195	Enterococcus phage vB_EfaP_Efmus1, complete genome	16600-16633	11	0.676
NZ_CP046040_2	2.16\|564510\|34\|NZ_CP046040\|PILER-CR,CRISPRCasFinder,CRT	564510-564543	34	NC_049936	Enterococcus phage vB_EfaP_Efmus3, complete genome	16952-16985	11	0.676

1. spacer 2.2|563585|33|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448824 (Streptococcus phage Javan637, complete genome) position: , mismatch: 0, identity: 1.0

cagagattgatatccaaaaaacaaaatccaatg	CRISPR spacer
cagagattgatatccaaaaaacaaaatccaatg	Protospacer
*********************************

2. spacer 2.2|563585|33|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448761 (Streptococcus phage Javan445, complete genome) position: , mismatch: 0, identity: 1.0

cagagattgatatccaaaaaacaaaatccaatg	CRISPR spacer
cagagattgatatccaaaaaacaaaatccaatg	Protospacer
*********************************

3. spacer 2.2|563585|33|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK449002 (Streptococcus phage Javan642, complete genome) position: , mismatch: 0, identity: 1.0

cagagattgatatccaaaaaacaaaatccaatg	CRISPR spacer
cagagattgatatccaaaaaacaaaatccaatg	Protospacer
*********************************

4. spacer 2.2|563585|33|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448760 (Streptococcus phage Javan443, complete genome) position: , mismatch: 0, identity: 1.0

cagagattgatatccaaaaaacaaaatccaatg	CRISPR spacer
cagagattgatatccaaaaaacaaaatccaatg	Protospacer
*********************************

5. spacer 2.2|563585|33|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK449003 (Streptococcus phage Javan648, complete genome) position: , mismatch: 0, identity: 1.0

cagagattgatatccaaaaaacaaaatccaatg	CRISPR spacer
cagagattgatatccaaaaaacaaaatccaatg	Protospacer
*********************************

6. spacer 2.6|563848|35|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448864 (Streptococcus phage Javan180, complete genome) position: , mismatch: 0, identity: 1.0

aaggtattgaggaaaaaattgccactggcaaaaaa	CRISPR spacer
aaggtattgaggaaaaaattgccactggcaaaaaa	Protospacer
***********************************

7. spacer 2.8|563981|34|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448862 (Streptococcus phage Javan178, complete genome) position: , mismatch: 0, identity: 1.0

atggttaatgtccaaaaattaaaaggtgtgattg	CRISPR spacer
atggttaatgtccaaaaattaaaaggtgtgattg	Protospacer
**********************************

8. spacer 2.8|563981|34|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448865 (Streptococcus phage Javan182, complete genome) position: , mismatch: 0, identity: 1.0

atggttaatgtccaaaaattaaaaggtgtgattg	CRISPR spacer
atggttaatgtccaaaaattaaaaggtgtgattg	Protospacer
**********************************

9. spacer 2.10|564114|34|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448767 (Streptococcus phage Javan467, complete genome) position: , mismatch: 0, identity: 1.0

cattgaatcgccagctacttttgcaatagtatca	CRISPR spacer
cattgaatcgccagctacttttgcaatagtatca	Protospacer
**********************************

10. spacer 2.10|564114|34|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448771 (Streptococcus phage Javan481, complete genome) position: , mismatch: 0, identity: 1.0

cattgaatcgccagctacttttgcaatagtatca	CRISPR spacer
cattgaatcgccagctacttttgcaatagtatca	Protospacer
**********************************

11. spacer 2.10|564114|34|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448942 (Streptococcus phage Javan448, complete genome) position: , mismatch: 0, identity: 1.0

cattgaatcgccagctacttttgcaatagtatca	CRISPR spacer
cattgaatcgccagctacttttgcaatagtatca	Protospacer
**********************************

12. spacer 2.10|564114|34|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to NC_004586 (Streptococcus pyogenes phage 315.3, complete genome) position: , mismatch: 0, identity: 1.0

cattgaatcgccagctacttttgcaatagtatca	CRISPR spacer
cattgaatcgccagctacttttgcaatagtatca	Protospacer
**********************************

13. spacer 2.10|564114|34|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448964 (Streptococcus phage Javan502, complete genome) position: , mismatch: 0, identity: 1.0

cattgaatcgccagctacttttgcaatagtatca	CRISPR spacer
cattgaatcgccagctacttttgcaatagtatca	Protospacer
**********************************

14. spacer 2.10|564114|34|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448943 (Streptococcus phage Javan450, complete genome) position: , mismatch: 0, identity: 1.0

cattgaatcgccagctacttttgcaatagtatca	CRISPR spacer
cattgaatcgccagctacttttgcaatagtatca	Protospacer
**********************************

15. spacer 2.10|564114|34|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448972 (Streptococcus phage Javan520, complete genome) position: , mismatch: 0, identity: 1.0

cattgaatcgccagctacttttgcaatagtatca	CRISPR spacer
cattgaatcgccagctacttttgcaatagtatca	Protospacer
**********************************

16. spacer 2.10|564114|34|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448786 (Streptococcus phage Javan509, complete genome) position: , mismatch: 0, identity: 1.0

cattgaatcgccagctacttttgcaatagtatca	CRISPR spacer
cattgaatcgccagctacttttgcaatagtatca	Protospacer
**********************************

17. spacer 2.10|564114|34|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448774 (Streptococcus phage Javan487, complete genome) position: , mismatch: 0, identity: 1.0

cattgaatcgccagctacttttgcaatagtatca	CRISPR spacer
cattgaatcgccagctacttttgcaatagtatca	Protospacer
**********************************

18. spacer 2.11|564180|34|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448767 (Streptococcus phage Javan467, complete genome) position: , mismatch: 0, identity: 1.0

cattgaatcgccagctacttttgcaatagtatca	CRISPR spacer
cattgaatcgccagctacttttgcaatagtatca	Protospacer
**********************************

19. spacer 2.11|564180|34|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448771 (Streptococcus phage Javan481, complete genome) position: , mismatch: 0, identity: 1.0

cattgaatcgccagctacttttgcaatagtatca	CRISPR spacer
cattgaatcgccagctacttttgcaatagtatca	Protospacer
**********************************

20. spacer 2.11|564180|34|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448942 (Streptococcus phage Javan448, complete genome) position: , mismatch: 0, identity: 1.0

cattgaatcgccagctacttttgcaatagtatca	CRISPR spacer
cattgaatcgccagctacttttgcaatagtatca	Protospacer
**********************************

21. spacer 2.11|564180|34|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to NC_004586 (Streptococcus pyogenes phage 315.3, complete genome) position: , mismatch: 0, identity: 1.0

cattgaatcgccagctacttttgcaatagtatca	CRISPR spacer
cattgaatcgccagctacttttgcaatagtatca	Protospacer
**********************************

22. spacer 2.11|564180|34|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448964 (Streptococcus phage Javan502, complete genome) position: , mismatch: 0, identity: 1.0

cattgaatcgccagctacttttgcaatagtatca	CRISPR spacer
cattgaatcgccagctacttttgcaatagtatca	Protospacer
**********************************

23. spacer 2.11|564180|34|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448943 (Streptococcus phage Javan450, complete genome) position: , mismatch: 0, identity: 1.0

cattgaatcgccagctacttttgcaatagtatca	CRISPR spacer
cattgaatcgccagctacttttgcaatagtatca	Protospacer
**********************************

24. spacer 2.11|564180|34|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448972 (Streptococcus phage Javan520, complete genome) position: , mismatch: 0, identity: 1.0

cattgaatcgccagctacttttgcaatagtatca	CRISPR spacer
cattgaatcgccagctacttttgcaatagtatca	Protospacer
**********************************

25. spacer 2.11|564180|34|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448786 (Streptococcus phage Javan509, complete genome) position: , mismatch: 0, identity: 1.0

cattgaatcgccagctacttttgcaatagtatca	CRISPR spacer
cattgaatcgccagctacttttgcaatagtatca	Protospacer
**********************************

26. spacer 2.11|564180|34|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448774 (Streptococcus phage Javan487, complete genome) position: , mismatch: 0, identity: 1.0

cattgaatcgccagctacttttgcaatagtatca	CRISPR spacer
cattgaatcgccagctacttttgcaatagtatca	Protospacer
**********************************

27. spacer 2.13|564313|35|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448694 (Streptococcus phage Javan179, complete genome) position: , mismatch: 0, identity: 1.0

actaaaatatgcaaaataatgaataaaaaggagag	CRISPR spacer
actaaaatatgcaaaataatgaataaaaaggagag	Protospacer
***********************************

28. spacer 2.18|564641|33|NZ_CP046040|CRISPRCasFinder,CRT matches to MK448960 (Streptococcus phage Javan492, complete genome) position: , mismatch: 0, identity: 1.0

tgcgagattaacttactgcacatggattttatc	CRISPR spacer
tgcgagattaacttactgcacatggattttatc	Protospacer
*********************************

29. spacer 2.18|564641|33|NZ_CP046040|CRISPRCasFinder,CRT matches to MK448762 (Streptococcus phage Javan447, complete genome) position: , mismatch: 0, identity: 1.0

tgcgagattaacttactgcacatggattttatc	CRISPR spacer
tgcgagattaacttactgcacatggattttatc	Protospacer
*********************************

30. spacer 2.18|564641|33|NZ_CP046040|CRISPRCasFinder,CRT matches to MK448965 (Streptococcus phage Javan506, complete genome) position: , mismatch: 0, identity: 1.0

tgcgagattaacttactgcacatggattttatc	CRISPR spacer
tgcgagattaacttactgcacatggattttatc	Protospacer
*********************************

31. spacer 2.18|564641|33|NZ_CP046040|CRISPRCasFinder,CRT matches to MK448791 (Streptococcus phage Javan517, complete genome) position: , mismatch: 0, identity: 1.0

tgcgagattaacttactgcacatggattttatc	CRISPR spacer
tgcgagattaacttactgcacatggattttatc	Protospacer
*********************************

32. spacer 2.18|564641|33|NZ_CP046040|CRISPRCasFinder,CRT matches to MK448959 (Streptococcus phage Javan488, complete genome) position: , mismatch: 0, identity: 1.0

tgcgagattaacttactgcacatggattttatc	CRISPR spacer
tgcgagattaacttactgcacatggattttatc	Protospacer
*********************************

33. spacer 2.18|564641|33|NZ_CP046040|CRISPRCasFinder,CRT matches to NC_004587 (Streptococcus prophage 315.4, complete genome) position: , mismatch: 0, identity: 1.0

tgcgagattaacttactgcacatggattttatc	CRISPR spacer
tgcgagattaacttactgcacatggattttatc	Protospacer
*********************************

34. spacer 2.18|564641|33|NZ_CP046040|CRISPRCasFinder,CRT matches to NC_003157 (Streptococcus pyogenes strain NIH1 putative methionine sulfoxide reductase gene, complete cds; and integrated temperate phage PhiNIH1.1, complete genome) position: , mismatch: 0, identity: 1.0

tgcgagattaacttactgcacatggattttatc	CRISPR spacer
tgcgagattaacttactgcacatggattttatc	Protospacer
*********************************

35. spacer 2.18|564641|33|NZ_CP046040|CRISPRCasFinder,CRT matches to MK448977 (Streptococcus phage Javan530, complete genome) position: , mismatch: 0, identity: 1.0

tgcgagattaacttactgcacatggattttatc	CRISPR spacer
tgcgagattaacttactgcacatggattttatc	Protospacer
*********************************

36. spacer 2.18|564641|33|NZ_CP046040|CRISPRCasFinder,CRT matches to MK448949 (Streptococcus phage Javan460, complete genome) position: , mismatch: 0, identity: 1.0

tgcgagattaacttactgcacatggattttatc	CRISPR spacer
tgcgagattaacttactgcacatggattttatc	Protospacer
*********************************

37. spacer 2.18|564641|33|NZ_CP046040|CRISPRCasFinder,CRT matches to MK448958 (Streptococcus phage Javan486, complete genome) position: , mismatch: 0, identity: 1.0

tgcgagattaacttactgcacatggattttatc	CRISPR spacer
tgcgagattaacttactgcacatggattttatc	Protospacer
*********************************

38. spacer 2.18|564641|33|NZ_CP046040|CRISPRCasFinder,CRT matches to MK448793 (Streptococcus phage Javan523, complete genome) position: , mismatch: 0, identity: 1.0

tgcgagattaacttactgcacatggattttatc	CRISPR spacer
tgcgagattaacttactgcacatggattttatc	Protospacer
*********************************

39. spacer 2.18|564641|33|NZ_CP046040|CRISPRCasFinder,CRT matches to MK448788 (Streptococcus phage Javan511, complete genome) position: , mismatch: 0, identity: 1.0

tgcgagattaacttactgcacatggattttatc	CRISPR spacer
tgcgagattaacttactgcacatggattttatc	Protospacer
*********************************

40. spacer 2.18|564641|33|NZ_CP046040|CRISPRCasFinder,CRT matches to MK448954 (Streptococcus phage Javan476, complete genome) position: , mismatch: 0, identity: 1.0

tgcgagattaacttactgcacatggattttatc	CRISPR spacer
tgcgagattaacttactgcacatggattttatc	Protospacer
*********************************

41. spacer 2.19|564706|36|NZ_CP046040|CRISPRCasFinder,CRT matches to MK448941 (Streptococcus phage Javan446, complete genome) position: , mismatch: 0, identity: 1.0

ctaaaagactttctgattttaaccaaccctgacaac	CRISPR spacer
ctaaaagactttctgattttaaccaaccctgacaac	Protospacer
************************************

42. spacer 2.1|563520|33|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448862 (Streptococcus phage Javan178, complete genome) position: , mismatch: 1, identity: 0.97

gtacaaaatagtgtgttaatatagtatcatagc	CRISPR spacer
gtacaaaatagcgtgttaatatagtatcatagc	Protospacer
***********.*********************

43. spacer 2.2|563585|33|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448960 (Streptococcus phage Javan492, complete genome) position: , mismatch: 1, identity: 0.97

cagagattgatatccaaaaaacaaaatccaatg	CRISPR spacer
cagagattgatatccaaaaaacaaaatctaatg	Protospacer
****************************.****

44. spacer 2.2|563585|33|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448762 (Streptococcus phage Javan447, complete genome) position: , mismatch: 1, identity: 0.97

cagagattgatatccaaaaaacaaaatccaatg	CRISPR spacer
cagagattgatatccaaaaaacaaaatctaatg	Protospacer
****************************.****

45. spacer 2.2|563585|33|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448862 (Streptococcus phage Javan178, complete genome) position: , mismatch: 1, identity: 0.97

cagagattgatatccaaaaaacaaaatccaatg	CRISPR spacer
ctgagattgatatccaaaaaacaaaatccaatg	Protospacer
* *******************************

46. spacer 2.2|563585|33|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448798 (Streptococcus phage Javan533, complete genome) position: , mismatch: 1, identity: 0.97

cagagattgatatccaaaaaacaaaatccaatg	CRISPR spacer
cagagattgatatccaaaaaacaaaatctaatg	Protospacer
****************************.****

47. spacer 2.2|563585|33|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448965 (Streptococcus phage Javan506, complete genome) position: , mismatch: 1, identity: 0.97

cagagattgatatccaaaaaacaaaatccaatg	CRISPR spacer
ctgagattgatatccaaaaaacaaaatccaatg	Protospacer
* *******************************

48. spacer 2.2|563585|33|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448955 (Streptococcus phage Javan478, complete genome) position: , mismatch: 1, identity: 0.97

cagagattgatatccaaaaaacaaaatccaatg	CRISPR spacer
ctgagattgatatccaaaaaacaaaatccaatg	Protospacer
* *******************************

49. spacer 2.2|563585|33|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448795 (Streptococcus phage Javan527, complete genome) position: , mismatch: 1, identity: 0.97

cagagattgatatccaaaaaacaaaatccaatg	CRISPR spacer
ctgagattgatatccaaaaaacaaaatccaatg	Protospacer
* *******************************

50. spacer 2.2|563585|33|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448791 (Streptococcus phage Javan517, complete genome) position: , mismatch: 1, identity: 0.97

cagagattgatatccaaaaaacaaaatccaatg	CRISPR spacer
ctgagattgatatccaaaaaacaaaatccaatg	Protospacer
* *******************************

51. spacer 2.2|563585|33|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448953 (Streptococcus phage Javan474, complete genome) position: , mismatch: 1, identity: 0.97

cagagattgatatccaaaaaacaaaatccaatg	CRISPR spacer
cagagattgatatccaaaaaacaaaatctaatg	Protospacer
****************************.****

52. spacer 2.2|563585|33|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448790 (Streptococcus phage Javan515, complete genome) position: , mismatch: 1, identity: 0.97

cagagattgatatccaaaaaacaaaatccaatg	CRISPR spacer
cagagattgatatccaaaaaacaaaatctaatg	Protospacer
****************************.****

53. spacer 2.2|563585|33|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448959 (Streptococcus phage Javan488, complete genome) position: , mismatch: 1, identity: 0.97

cagagattgatatccaaaaaacaaaatccaatg	CRISPR spacer
ctgagattgatatccaaaaaacaaaatccaatg	Protospacer
* *******************************

54. spacer 2.2|563585|33|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to NC_004587 (Streptococcus prophage 315.4, complete genome) position: , mismatch: 1, identity: 0.97

cagagattgatatccaaaaaacaaaatccaatg	CRISPR spacer
ctgagattgatatccaaaaaacaaaatccaatg	Protospacer
* *******************************

55. spacer 2.2|563585|33|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448945 (Streptococcus phage Javan454, complete genome) position: , mismatch: 1, identity: 0.97

cagagattgatatccaaaaaacaaaatccaatg	CRISPR spacer
ctgagattgatatccaaaaaacaaaatccaatg	Protospacer
* *******************************

56. spacer 2.2|563585|33|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to NC_003157 (Streptococcus pyogenes strain NIH1 putative methionine sulfoxide reductase gene, complete cds; and integrated temperate phage PhiNIH1.1, complete genome) position: , mismatch: 1, identity: 0.97

cagagattgatatccaaaaaacaaaatccaatg	CRISPR spacer
ctgagattgatatccaaaaaacaaaatccaatg	Protospacer
* *******************************

57. spacer 2.2|563585|33|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448962 (Streptococcus phage Javan496, complete genome) position: , mismatch: 1, identity: 0.97

cagagattgatatccaaaaaacaaaatccaatg	CRISPR spacer
ctgagattgatatccaaaaaacaaaatccaatg	Protospacer
* *******************************

58. spacer 2.2|563585|33|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448977 (Streptococcus phage Javan530, complete genome) position: , mismatch: 1, identity: 0.97

cagagattgatatccaaaaaacaaaatccaatg	CRISPR spacer
ctgagattgatatccaaaaaacaaaatccaatg	Protospacer
* *******************************

59. spacer 2.2|563585|33|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448949 (Streptococcus phage Javan460, complete genome) position: , mismatch: 1, identity: 0.97

cagagattgatatccaaaaaacaaaatccaatg	CRISPR spacer
ctgagattgatatccaaaaaacaaaatccaatg	Protospacer
* *******************************

60. spacer 2.2|563585|33|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448783 (Streptococcus phage Javan503, complete genome) position: , mismatch: 1, identity: 0.97

cagagattgatatccaaaaaacaaaatccaatg	CRISPR spacer
ctgagattgatatccaaaaaacaaaatccaatg	Protospacer
* *******************************

61. spacer 2.2|563585|33|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448967 (Streptococcus phage Javan510, complete genome) position: , mismatch: 1, identity: 0.97

cagagattgatatccaaaaaacaaaatccaatg	CRISPR spacer
cagagattgatatccaaaaaacaaaatctaatg	Protospacer
****************************.****

62. spacer 2.2|563585|33|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448854 (Streptococcus phage Javan146, complete genome) position: , mismatch: 1, identity: 0.97

cagagattgatatccaaaaaacaaaatccaatg	CRISPR spacer
cagagattgatatccaaaaaacaaaatctaatg	Protospacer
****************************.****

63. spacer 2.2|563585|33|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448694 (Streptococcus phage Javan179, complete genome) position: , mismatch: 1, identity: 0.97

cagagattgatatccaaaaaacaaaatccaatg	CRISPR spacer
ccgagattgatatccaaaaaacaaaatccaatg	Protospacer
* *******************************

64. spacer 2.2|563585|33|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448788 (Streptococcus phage Javan511, complete genome) position: , mismatch: 1, identity: 0.97

cagagattgatatccaaaaaacaaaatccaatg	CRISPR spacer
ctgagattgatatccaaaaaacaaaatccaatg	Protospacer
* *******************************

65. spacer 2.2|563585|33|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to NC_004588 (Streptococcus prophage 315.5, complete genome) position: , mismatch: 1, identity: 0.97

cagagattgatatccaaaaaacaaaatccaatg	CRISPR spacer
cagagattgatatccaaaaaacaaaatctaatg	Protospacer
****************************.****

66. spacer 2.7|563915|34|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448958 (Streptococcus phage Javan486, complete genome) position: , mismatch: 1, identity: 0.971

attgctaacactagtaaaattacctcgtagtgtc	CRISPR spacer
attgctaacactagtaaaattacctcgtagcgtc	Protospacer
******************************.***

67. spacer 2.8|563981|34|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448673 (Streptococcus phage Javan119, complete genome) position: , mismatch: 1, identity: 0.971

atggttaatgtccaaaaattaaaaggtgtgattg	CRISPR spacer
atggttaatgtccaaaaattaaaaggtgcgattg	Protospacer
****************************.*****

68. spacer 2.10|564114|34|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448862 (Streptococcus phage Javan178, complete genome) position: , mismatch: 1, identity: 0.971

cattgaatcgccagctacttttgcaatagtatca	CRISPR spacer
cattgaatcaccagctacttttgcaatagtatca	Protospacer
*********.************************

69. spacer 2.11|564180|34|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448862 (Streptococcus phage Javan178, complete genome) position: , mismatch: 1, identity: 0.971

cattgaatcgccagctacttttgcaatagtatca	CRISPR spacer
cattgaatcaccagctacttttgcaatagtatca	Protospacer
*********.************************

70. spacer 2.17|564576|33|NZ_CP046040|CRISPRCasFinder,CRT matches to JX409894 (Streptococcus phage LYGO9, complete genome) position: , mismatch: 1, identity: 0.97

gtgtatcgcagacatgcattgccttgcgtttcg	CRISPR spacer
gtgtatcgcagacgtgcattgccttgcgtttcg	Protospacer
*************.*******************

71. spacer 2.17|564576|33|NZ_CP046040|CRISPRCasFinder,CRT matches to JX409895 (Streptococcus phage JX01, complete genome) position: , mismatch: 1, identity: 0.97

gtgtatcgcagacatgcattgccttgcgtttcg	CRISPR spacer
gtgtatcgcagacgtgcattgccttgcgtttcg	Protospacer
*************.*******************

72. spacer 2.18|564641|33|NZ_CP046040|CRISPRCasFinder,CRT matches to MK448951 (Streptococcus phage Javan470, complete genome) position: , mismatch: 1, identity: 0.97

tgcgagattaacttactgcacatggattttatc	CRISPR spacer
tgtgagattaacttactgcacatggattttatc	Protospacer
**.******************************

73. spacer 1.1|500675|24|NZ_CP046040|CRT matches to NZ_CP047096 (Bacillus marisflavi strain 151-25 plasmid p25, complete sequence) position: , mismatch: 2, identity: 0.917

tttaggctcaggttgtggcttagg	CRISPR spacer
cttagactcaggttgtggcttagg	Protospacer
.****.******************

74. spacer 1.8|501143|24|NZ_CP046040|CRT matches to NZ_CP015507 (Bacillus oceanisediminis 2691 plasmid pBO1, complete sequence) position: , mismatch: 2, identity: 0.917

atctggcttaggctcaggtttagg	CRISPR spacer
ctgtggcttaggctcaggtttagg	Protospacer
 * *********************

75. spacer 1.8|501143|24|NZ_CP046040|CRT matches to MT774375 (CrAssphage cr50_1, complete genome) position: , mismatch: 2, identity: 0.917

atctggcttaggctcaggtttagg	CRISPR spacer
aactggtttaggctcaggtttagg	Protospacer
* ****.*****************

76. spacer 2.2|563585|33|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448858 (Streptococcus phage Javan166, complete genome) position: , mismatch: 2, identity: 0.939

cagagattgatatccaaaaaacaaaatccaatg	CRISPR spacer
cagagattgacatccaaaaaacaaaatctaatg	Protospacer
**********.*****************.****

77. spacer 2.2|563585|33|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK449010 (Streptococcus phage Javan90, complete genome) position: , mismatch: 2, identity: 0.939

cagagattgatatccaaaaaacaaaatccaatg	CRISPR spacer
ctgagattgacatccaaaaaacaaaatccaatg	Protospacer
* ********.**********************

78. spacer 2.2|563585|33|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448775 (Streptococcus phage Javan489, complete genome) position: , mismatch: 2, identity: 0.939

cagagattgatatccaaaaaacaaaatccaatg	CRISPR spacer
ctgagattgatatccaaaaaacaaaatccaacg	Protospacer
* *****************************.*

79. spacer 2.2|563585|33|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448794 (Streptococcus phage Javan525, complete genome) position: , mismatch: 2, identity: 0.939

cagagattgatatccaaaaaacaaaatccaatg	CRISPR spacer
ctgagattgatatccaaaaaacaaaatccaacg	Protospacer
* *****************************.*

80. spacer 2.2|563585|33|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448944 (Streptococcus phage Javan452, complete genome) position: , mismatch: 2, identity: 0.939

cagagattgatatccaaaaaacaaaatccaatg	CRISPR spacer
ctgagattgatatccaaaaaacaaaatccaacg	Protospacer
* *****************************.*

81. spacer 2.2|563585|33|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448793 (Streptococcus phage Javan523, complete genome) position: , mismatch: 2, identity: 0.939

cagagattgatatccaaaaaacaaaatccaatg	CRISPR spacer
ctgagattgatatccaaaaaacaaaatccaacg	Protospacer
* *****************************.*

82. spacer 2.2|563585|33|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448933 (Streptococcus phage Javan420, complete genome) position: , mismatch: 2, identity: 0.939

cagagattgatatccaaaaaacaaaatccaatg	CRISPR spacer
cagagattgatattcaaaaaacaaaatctaatg	Protospacer
*************.**************.****

83. spacer 2.2|563585|33|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448765 (Streptococcus phage Javan459, complete genome) position: , mismatch: 2, identity: 0.939

cagagattgatatccaaaaaacaaaatccaatg	CRISPR spacer
ctgagattgatatccaaaaaacaaaatccaacg	Protospacer
* *****************************.*

84. spacer 2.2|563585|33|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448833 (Streptococcus phage Javan87, complete genome) position: , mismatch: 2, identity: 0.939

cagagattgatatccaaaaaacaaaatccaatg	CRISPR spacer
ctgagattgacatccaaaaaacaaaatccaatg	Protospacer
* ********.**********************

85. spacer 2.2|563585|33|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448688 (Streptococcus phage Javan161, complete genome) position: , mismatch: 2, identity: 0.939

cagagattgatatccaaaaaacaaaatccaatg	CRISPR spacer
ctgagattgatatccaaaaaactaaatccaatg	Protospacer
* ******************** **********

86. spacer 2.7|563915|34|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448791 (Streptococcus phage Javan517, complete genome) position: , mismatch: 2, identity: 0.941

attgctaacactagtaaaattacctcgtagtgtc	CRISPR spacer
attactaacactagtaaaattacctcgtagcgtc	Protospacer
***.**************************.***

87. spacer 2.7|563915|34|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to NC_004587 (Streptococcus prophage 315.4, complete genome) position: , mismatch: 2, identity: 0.941

attgctaacactagtaaaattacctcgtagtgtc	CRISPR spacer
attactaacactagtaaaattacctcgtagcgtc	Protospacer
***.**************************.***

88. spacer 2.7|563915|34|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to NC_003157 (Streptococcus pyogenes strain NIH1 putative methionine sulfoxide reductase gene, complete cds; and integrated temperate phage PhiNIH1.1, complete genome) position: , mismatch: 2, identity: 0.941

attgctaacactagtaaaattacctcgtagtgtc	CRISPR spacer
attactaacactagtaaaattacctcgtagcgtc	Protospacer
***.**************************.***

89. spacer 2.7|563915|34|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448977 (Streptococcus phage Javan530, complete genome) position: , mismatch: 2, identity: 0.941

attgctaacactagtaaaattacctcgtagtgtc	CRISPR spacer
attactaacactagtaaaattacctcgtagcgtc	Protospacer
***.**************************.***

90. spacer 2.7|563915|34|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448788 (Streptococcus phage Javan511, complete genome) position: , mismatch: 2, identity: 0.941

attgctaacactagtaaaattacctcgtagtgtc	CRISPR spacer
attactaacactagtaaaattacctcgtagcgtc	Protospacer
***.**************************.***

91. spacer 2.15|564445|33|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448862 (Streptococcus phage Javan178, complete genome) position: , mismatch: 2, identity: 0.939

ctaaagaggtgacggaatgaataaaagcgaaat	CRISPR spacer
ctaaagaggtgaacgaatgaataaaagcgaaat	Protospacer
************  *******************

92. spacer 1.8|501143|24|NZ_CP046040|CRT matches to MK962756 (Shigella phage JK42, complete genome) position: , mismatch: 3, identity: 0.875

atctggcttaggctcaggtttagg	CRISPR spacer
ttctggcttaggctcaggttttgc	Protospacer
 ******************** *

93. spacer 1.8|501143|24|NZ_CP046040|CRT matches to NZ_CP047096 (Bacillus marisflavi strain 151-25 plasmid p25, complete sequence) position: , mismatch: 3, identity: 0.875

atctggcttaggctcaggtttagg	CRISPR spacer
ttctggctttggctcaggtttcgg	Protospacer
 ******** *********** **

94. spacer 1.8|501143|24|NZ_CP046040|CRT matches to NZ_CP047096 (Bacillus marisflavi strain 151-25 plasmid p25, complete sequence) position: , mismatch: 3, identity: 0.875

atctggcttaggctcaggtttagg	CRISPR spacer
ttctggctttggctcaggtttcgg	Protospacer
 ******** *********** **

95. spacer 1.8|501143|24|NZ_CP046040|CRT matches to NZ_CP047096 (Bacillus marisflavi strain 151-25 plasmid p25, complete sequence) position: , mismatch: 3, identity: 0.875

atctggcttaggctcaggtttagg	CRISPR spacer
ttctggctttggctcaggttttgg	Protospacer
 ******** *********** **

96. spacer 1.8|501143|24|NZ_CP046040|CRT matches to NZ_CP039693 (Agrobacterium larrymoorei strain CFBP5473 plasmid pAlCFBP5473, complete sequence) position: , mismatch: 3, identity: 0.875

atctggcttaggctcaggtttagg	CRISPR spacer
ttctggcctaggatcaggtttagg	Protospacer
 ******.**** ***********

97. spacer 1.8|501143|24|NZ_CP046040|CRT matches to NZ_CP020748 (Bacillus mycoides strain Gnyt1 plasmid unnamed5, complete sequence) position: , mismatch: 3, identity: 0.875

atctggcttaggctcaggtttagg	CRISPR spacer
ttctggcttaggctctggttttgg	Protospacer
 ************** ***** **

98. spacer 1.8|501143|24|NZ_CP046040|CRT matches to NZ_CP020748 (Bacillus mycoides strain Gnyt1 plasmid unnamed5, complete sequence) position: , mismatch: 3, identity: 0.875

atctggcttaggctcaggtttagg	CRISPR spacer
ctctggcttaggctctggttttgg	Protospacer
 ************** ***** **

99. spacer 1.8|501143|24|NZ_CP046040|CRT matches to NZ_CP020748 (Bacillus mycoides strain Gnyt1 plasmid unnamed5, complete sequence) position: , mismatch: 3, identity: 0.875

atctggcttaggctcaggtttagg	CRISPR spacer
ttctggcttaggctctggttttgg	Protospacer
 ************** ***** **

100. spacer 1.8|501143|24|NZ_CP046040|CRT matches to NZ_CP020748 (Bacillus mycoides strain Gnyt1 plasmid unnamed5, complete sequence) position: , mismatch: 3, identity: 0.875

atctggcttaggctcaggtttagg	CRISPR spacer
ctctggcttaggctctggcttagg	Protospacer
 ************** **.*****

101. spacer 1.8|501143|24|NZ_CP046040|CRT matches to NZ_CP020748 (Bacillus mycoides strain Gnyt1 plasmid unnamed5, complete sequence) position: , mismatch: 3, identity: 0.875

atctggcttaggctcaggtttagg	CRISPR spacer
ctctggcttaggctctggttttgg	Protospacer
 ************** ***** **

102. spacer 1.8|501143|24|NZ_CP046040|CRT matches to NZ_CP020748 (Bacillus mycoides strain Gnyt1 plasmid unnamed5, complete sequence) position: , mismatch: 3, identity: 0.875

atctggcttaggctcaggtttagg	CRISPR spacer
ttctggcttaggctctggttttgg	Protospacer
 ************** ***** **

103. spacer 1.8|501143|24|NZ_CP046040|CRT matches to NZ_CP020748 (Bacillus mycoides strain Gnyt1 plasmid unnamed5, complete sequence) position: , mismatch: 3, identity: 0.875

atctggcttaggctcaggtttagg	CRISPR spacer
ctctggcttaggctctggttttgg	Protospacer
 ************** ***** **

104. spacer 1.8|501143|24|NZ_CP046040|CRT matches to NZ_CP020748 (Bacillus mycoides strain Gnyt1 plasmid unnamed5, complete sequence) position: , mismatch: 3, identity: 0.875

atctggcttaggctcaggtttagg	CRISPR spacer
ttctggcttaggctctggcttagg	Protospacer
 ************** **.*****

105. spacer 1.8|501143|24|NZ_CP046040|CRT matches to NZ_CP020748 (Bacillus mycoides strain Gnyt1 plasmid unnamed5, complete sequence) position: , mismatch: 3, identity: 0.875

atctggcttaggctcaggtttagg	CRISPR spacer
ctctggcttaggctctggttttgg	Protospacer
 ************** ***** **

106. spacer 1.8|501143|24|NZ_CP046040|CRT matches to NZ_CP020748 (Bacillus mycoides strain Gnyt1 plasmid unnamed5, complete sequence) position: , mismatch: 3, identity: 0.875

atctggcttaggctcaggtttagg	CRISPR spacer
ttctggcttaggctctggttttgg	Protospacer
 ************** ***** **

107. spacer 1.8|501143|24|NZ_CP046040|CRT matches to NZ_CP020748 (Bacillus mycoides strain Gnyt1 plasmid unnamed5, complete sequence) position: , mismatch: 3, identity: 0.875

atctggcttaggctcaggtttagg	CRISPR spacer
ttctggcttaggctctggttttgg	Protospacer
 ************** ***** **

108. spacer 1.8|501143|24|NZ_CP046040|CRT matches to NZ_CP020748 (Bacillus mycoides strain Gnyt1 plasmid unnamed5, complete sequence) position: , mismatch: 3, identity: 0.875

atctggcttaggctcaggtttagg	CRISPR spacer
ctctggcttaggctctggttttgg	Protospacer
 ************** ***** **

109. spacer 1.8|501143|24|NZ_CP046040|CRT matches to NZ_CP020748 (Bacillus mycoides strain Gnyt1 plasmid unnamed5, complete sequence) position: , mismatch: 3, identity: 0.875

atctggcttaggctcaggtttagg	CRISPR spacer
ttctggcttaggctctggttttgg	Protospacer
 ************** ***** **

110. spacer 1.8|501143|24|NZ_CP046040|CRT matches to NZ_CP020748 (Bacillus mycoides strain Gnyt1 plasmid unnamed5, complete sequence) position: , mismatch: 3, identity: 0.875

atctggcttaggctcaggtttagg	CRISPR spacer
ttctggcttaggctctggttttgg	Protospacer
 ************** ***** **

111. spacer 1.8|501143|24|NZ_CP046040|CRT matches to NZ_CP020748 (Bacillus mycoides strain Gnyt1 plasmid unnamed5, complete sequence) position: , mismatch: 3, identity: 0.875

atctggcttaggctcaggtttagg	CRISPR spacer
ctctggcttaggctctggttttgg	Protospacer
 ************** ***** **

112. spacer 1.8|501143|24|NZ_CP046040|CRT matches to NZ_CP020748 (Bacillus mycoides strain Gnyt1 plasmid unnamed5, complete sequence) position: , mismatch: 3, identity: 0.875

atctggcttaggctcaggtttagg	CRISPR spacer
ttctggcttaggctctggcttagg	Protospacer
 ************** **.*****

113. spacer 1.8|501143|24|NZ_CP046040|CRT matches to NZ_CP020748 (Bacillus mycoides strain Gnyt1 plasmid unnamed5, complete sequence) position: , mismatch: 3, identity: 0.875

atctggcttaggctcaggtttagg	CRISPR spacer
ctctggcttaggctctggttttgg	Protospacer
 ************** ***** **

114. spacer 1.8|501143|24|NZ_CP046040|CRT matches to NZ_CP011157 (Bacillus cereus strain HN001 plasmid pRML02, complete sequence) position: , mismatch: 3, identity: 0.875

atctggcttaggctcaggtttagg	CRISPR spacer
ctctggcttcggctcaggttttgg	Protospacer
 ******** *********** **

115. spacer 1.8|501143|24|NZ_CP046040|CRT matches to NZ_CP011157 (Bacillus cereus strain HN001 plasmid pRML02, complete sequence) position: , mismatch: 3, identity: 0.875

atctggcttaggctcaggtttagg	CRISPR spacer
ttctggcttcggctcaggttttgg	Protospacer
 ******** *********** **

116. spacer 1.8|501143|24|NZ_CP046040|CRT matches to NZ_CP011157 (Bacillus cereus strain HN001 plasmid pRML02, complete sequence) position: , mismatch: 3, identity: 0.875

atctggcttaggctcaggtttagg	CRISPR spacer
ttctggcttcggctcaggttttgg	Protospacer
 ******** *********** **

117. spacer 1.8|501143|24|NZ_CP046040|CRT matches to NZ_CP011157 (Bacillus cereus strain HN001 plasmid pRML02, complete sequence) position: , mismatch: 3, identity: 0.875

atctggcttaggctcaggtttagg	CRISPR spacer
ctctggcttcggctcaggttttgg	Protospacer
 ******** *********** **

118. spacer 1.8|501143|24|NZ_CP046040|CRT matches to NZ_CP011157 (Bacillus cereus strain HN001 plasmid pRML02, complete sequence) position: , mismatch: 3, identity: 0.875

atctggcttaggctcaggtttagg	CRISPR spacer
ttctggcttcggctcaggttttgg	Protospacer
 ******** *********** **

119. spacer 1.8|501143|24|NZ_CP046040|CRT matches to NZ_CP011157 (Bacillus cereus strain HN001 plasmid pRML02, complete sequence) position: , mismatch: 3, identity: 0.875

atctggcttaggctcaggtttagg	CRISPR spacer
ttctggcttcggctcaggttttgg	Protospacer
 ******** *********** **

120. spacer 1.8|501143|24|NZ_CP046040|CRT matches to NC_007807 (Pseudomonas phage 119X, complete genome) position: , mismatch: 3, identity: 0.875

atctggcttaggctcaggtttagg	CRISPR spacer
ttcaggcttaggctcaggcttagg	Protospacer
 ** **************.*****

121. spacer 1.8|501143|24|NZ_CP046040|CRT matches to DQ163914 (Bacteriophage 119X, complete genome) position: , mismatch: 3, identity: 0.875

atctggcttaggctcaggtttagg	CRISPR spacer
ttcaggcttaggctcaggcttagg	Protospacer
 ** **************.*****

122. spacer 1.8|501143|24|NZ_CP046040|CRT matches to NZ_CP032411 (Brevibacillus laterosporus strain E7593-50 plasmid pAZOBL1, complete sequence) position: , mismatch: 3, identity: 0.875

atctggcttaggctcaggtttagg	CRISPR spacer
ctctggcttaggctctggtctagg	Protospacer
 ************** ***.****

123. spacer 1.8|501143|24|NZ_CP046040|CRT matches to NZ_CP032411 (Brevibacillus laterosporus strain E7593-50 plasmid pAZOBL1, complete sequence) position: , mismatch: 3, identity: 0.875

atctggcttaggctcaggtttagg	CRISPR spacer
ctctggcttaggctctggtctagg	Protospacer
 ************** ***.****

124. spacer 1.8|501143|24|NZ_CP046040|CRT matches to KX196154 (Shewanella phage SFCi1, complete genome) position: , mismatch: 3, identity: 0.875

atctggcttaggctcaggtttagg	CRISPR spacer
ctctggcttaggctctggcttagg	Protospacer
 ************** **.*****

125. spacer 1.8|501143|24|NZ_CP046040|CRT matches to KX196154 (Shewanella phage SFCi1, complete genome) position: , mismatch: 3, identity: 0.875

atctggcttaggctcaggtttagg	CRISPR spacer
ctctggcttaggctctggcttagg	Protospacer
 ************** **.*****

126. spacer 1.8|501143|24|NZ_CP046040|CRT matches to MN693766 (Marine virus AFVG_250M849, complete genome) position: , mismatch: 3, identity: 0.875

atctggcttaggctcaggtttagg	CRISPR spacer
gtctggtttaggcacaggtttagg	Protospacer
.*****.****** **********

127. spacer 2.2|563585|33|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448672 (Streptococcus phage Javan117, complete genome) position: , mismatch: 3, identity: 0.909

cagagattgatatccaaaaaacaaaatccaatg	CRISPR spacer
ccgagattgatatacaaaaaacaaaatctaatg	Protospacer
* *********** **************.****

128. spacer 2.2|563585|33|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448849 (Streptococcus phage Javan128, complete genome) position: , mismatch: 3, identity: 0.909

cagagattgatatccaaaaaacaaaatccaatg	CRISPR spacer
ccgagattgatatacaaaaaacaaaatctaatg	Protospacer
* *********** **************.****

129. spacer 2.15|564445|33|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448673 (Streptococcus phage Javan119, complete genome) position: , mismatch: 3, identity: 0.909

ctaaagaggtgacggaatgaataaaagcgaaat	CRISPR spacer
ttattgaggtgacggaatgaataaaagcgaaat	Protospacer
.**  ****************************

130. spacer 2.15|564445|33|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448672 (Streptococcus phage Javan117, complete genome) position: , mismatch: 3, identity: 0.909

ctaaagaggtgacggaatgaataaaagcgaaat	CRISPR spacer
cgaaagaggtgacggaatgaataaaagaggaat	Protospacer
* ************************* *.***

131. spacer 2.15|564445|33|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448849 (Streptococcus phage Javan128, complete genome) position: , mismatch: 3, identity: 0.909

ctaaagaggtgacggaatgaataaaagcgaaat	CRISPR spacer
cgaaagaggtgacggaatgaataaaagaggaat	Protospacer
* ************************* *.***

132. spacer 2.15|564445|33|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448850 (Streptococcus phage Javan132, complete genome) position: , mismatch: 3, identity: 0.909

ctaaagaggtgacggaatgaataaaagcgaaat	CRISPR spacer
cgaaagaggtgacggaatgaataaaagaggaat	Protospacer
* ************************* *.***

133. spacer 1.3|500813|24|NZ_CP046040|CRT matches to KY883654 (Vibrio phage JSF10, complete genome) position: , mismatch: 4, identity: 0.833

cttaggctctagtttaggcattgg	CRISPR spacer
tttaggctctagtttaggcaacag	Protospacer
.******************* ..*

134. spacer 1.3|500813|24|NZ_CP046040|CRT matches to NC_047882 (Vibrio phage JSF12, complete genome) position: , mismatch: 4, identity: 0.833

cttaggctctagtttaggcattgg	CRISPR spacer
tttaggctctagtttaggcaacag	Protospacer
.******************* ..*

135. spacer 2.15|564445|33|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448858 (Streptococcus phage Javan166, complete genome) position: , mismatch: 4, identity: 0.879

ctaaagaggtgacggaatgaataaaagcgaaat	CRISPR spacer
ttattgaggtgacggaatgaataaaagagaaat	Protospacer
.**  ********************** *****

136. spacer 2.15|564445|33|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448859 (Streptococcus phage Javan170, complete genome) position: , mismatch: 4, identity: 0.879

ctaaagaggtgacggaatgaataaaagcgaaat	CRISPR spacer
ttattgaggtgacggaatgaataaaagagaaat	Protospacer
.**  ********************** *****

137. spacer 2.15|564445|33|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448690 (Streptococcus phage Javan169, complete genome) position: , mismatch: 4, identity: 0.879

ctaaagaggtgacggaatgaataaaagcgaaat	CRISPR spacer
ttattgaggtgacggaatgaataaaagagaaat	Protospacer
.**  ********************** *****

138. spacer 2.15|564445|33|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448688 (Streptococcus phage Javan161, complete genome) position: , mismatch: 4, identity: 0.879

ctaaagaggtgacggaatgaataaaagcgaaat	CRISPR spacer
ttattgaggtgacggaatgaataaaagagaaat	Protospacer
.**  ********************** *****

139. spacer 2.15|564445|33|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448848 (Streptococcus phage Javan126, complete genome) position: , mismatch: 5, identity: 0.848

ctaaagaggtgacggaatgaataaaagcgaaat	CRISPR spacer
ttattgaggtggcggaatgaataaaagagaaat	Protospacer
.**  ******.*************** *****

140. spacer 2.15|564445|33|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448857 (Streptococcus phage Javan164, complete genome) position: , mismatch: 5, identity: 0.848

ctaaagaggtgacggaatgaataaaagcgaaat	CRISPR spacer
ttattgaggtggcggaatgaataaaagagaaat	Protospacer
.**  ******.*************** *****

141. spacer 2.15|564445|33|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448677 (Streptococcus phage Javan133, complete genome) position: , mismatch: 5, identity: 0.848

ctaaagaggtgacggaatgaataaaagcgaaat	CRISPR spacer
ttattgaggtggcggaatgaataaaagagaaat	Protospacer
.**  ******.*************** *****

142. spacer 2.15|564445|33|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448679 (Streptococcus phage Javan137, complete genome) position: , mismatch: 5, identity: 0.848

ctaaagaggtgacggaatgaataaaagcgaaat	CRISPR spacer
ttattgaggtgacggaatgaacaaaagagaaat	Protospacer
.**  ****************.***** *****

143. spacer 2.15|564445|33|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448682 (Streptococcus phage Javan143, complete genome) position: , mismatch: 5, identity: 0.848

ctaaagaggtgacggaatgaataaaagcgaaat	CRISPR spacer
ttactgaggtggcggaatgaataaaagagaaat	Protospacer
.**  ******.*************** *****

144. spacer 2.15|564445|33|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448845 (Streptococcus phage Javan118, complete genome) position: , mismatch: 6, identity: 0.818

ctaaagaggtgacggaatgaataaaagcgaaat	CRISPR spacer
tagaggagatgacggaatgaatgaaagcgaaat	Protospacer
. .*.***.*************.**********

145. spacer 2.15|564445|33|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035749 (Leuconostoc mesenteroides strain SRCM103460 plasmid unnamed3, complete sequence) position: , mismatch: 6, identity: 0.818

ctaaagaggtgacggaatgaataaaagcgaaat-	CRISPR spacer
ttaaaggggtgacggaatgaa-aaaagagagctg	Protospacer
.*****.************** ***** **. *

146. spacer 3.2|574458|42|NZ_CP046040|CRISPRCasFinder matches to MK448862 (Streptococcus phage Javan178, complete genome) position: , mismatch: 6, identity: 0.857

aaatttttgggtgcagcttagcattattttcatacattgtcg	CRISPR spacer
gtttttttgggtgcagcttagcattattttcatacattttta	Protospacer
.  *********************************** *..

147. spacer 2.5|563783|33|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024405 (Borrelia miyamotoi strain Izh-4 plasmid pIzh4-lp18-1, complete sequence) position: , mismatch: 7, identity: 0.788

aagcttttatatggctgataaactgcttggaaa	CRISPR spacer
tagcttttatatggctaataaactggtttgtgg	Protospacer
 ***************.******** ** * ..

148. spacer 2.13|564313|35|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to KX077889 (Streptococcus phage phiZJ20091101-1, complete genome) position: , mismatch: 7, identity: 0.8

actaaaa---tatgcaaaataatgaataaaaaggagag	CRISPR spacer
---gaaattttatgcaaaagaatgaataaaaaggagta	Protospacer
   .***   ********* **************** .

149. spacer 2.13|564313|35|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448813 (Streptococcus phage Javan579, complete genome) position: , mismatch: 7, identity: 0.8

actaaaa---tatgcaaaataatgaataaaaaggagag	CRISPR spacer
---gaaattttatgcaaaagaatgaataaaaaggagta	Protospacer
   .***   ********* **************** .

150. spacer 2.8|563981|34|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013769 (Piscirickettsia salmonis strain PM23019A plasmid p1PS3, complete sequence) position: , mismatch: 8, identity: 0.765

atggttaatgtccaaaaattaaaaggtgtgattg	CRISPR spacer
aaagaacaagtccaaaaattaaaagatctgattg	Protospacer
* .*   * ****************.* ******

151. spacer 2.8|563981|34|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038953 (Piscirickettsia salmonis strain Psal-040 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.765

atggttaatgtccaaaaattaaaaggtgtgattg	CRISPR spacer
aaagaacaagtccaaaaattaaaagatctgattg	Protospacer
* .*   * ****************.* ******

152. spacer 2.8|563981|34|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039042 (Piscirickettsia salmonis strain Psal-072 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.765

atggttaatgtccaaaaattaaaaggtgtgattg	CRISPR spacer
aaagaacaagtccaaaaattaaaagatctgattg	Protospacer
* .*   * ****************.* ******

153. spacer 2.10|564114|34|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MG592452 (Vibrio phage 1.076.O._10N.286.51.B7, partial genome) position: , mismatch: 8, identity: 0.765

cattgaatcgccagctacttttgcaatagtatca	CRISPR spacer
agctttatcgccagcgacttttgcaatagcatcg	Protospacer
 ..*  ********* *************.***.

154. spacer 2.10|564114|34|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MG592580 (Vibrio phage 1.210.O._10N.222.52.C2, partial genome) position: , mismatch: 8, identity: 0.765

cattgaatcgccagctacttttgcaatagtatca	CRISPR spacer
agctttatcgccagcgacttttgcaatagcatcg	Protospacer
 ..*  ********* *************.***.

155. spacer 2.11|564180|34|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MG592452 (Vibrio phage 1.076.O._10N.286.51.B7, partial genome) position: , mismatch: 8, identity: 0.765

cattgaatcgccagctacttttgcaatagtatca	CRISPR spacer
agctttatcgccagcgacttttgcaatagcatcg	Protospacer
 ..*  ********* *************.***.

156. spacer 2.11|564180|34|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MG592580 (Vibrio phage 1.210.O._10N.222.52.C2, partial genome) position: , mismatch: 8, identity: 0.765

cattgaatcgccagctacttttgcaatagtatca	CRISPR spacer
agctttatcgccagcgacttttgcaatagcatcg	Protospacer
 ..*  ********* *************.***.

157. spacer 2.3|563650|35|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to AP014503 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S42-C30, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces) position: , mismatch: 9, identity: 0.743

ctaccaagatatttgtaacaatcttggaatggatt	CRISPR spacer
gaaccaagatatttacaacaatcttgggtttgtat	Protospacer
  ************..***********. * *  *

158. spacer 2.10|564114|34|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MN693085 (Marine virus AFVG_25M85, complete genome) position: , mismatch: 9, identity: 0.735

cattgaatcgccagctacttttgcaatagtatca	CRISPR spacer
tgatggatcgccagcttcttttgcaataccaccg	Protospacer
.. **.********** *********** .*.*.

159. spacer 2.11|564180|34|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MN693085 (Marine virus AFVG_25M85, complete genome) position: , mismatch: 9, identity: 0.735

cattgaatcgccagctacttttgcaatagtatca	CRISPR spacer
tgatggatcgccagcttcttttgcaataccaccg	Protospacer
.. **.********** *********** .*.*.

160. spacer 2.13|564313|35|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to KC348598 (Streptococcus phage phi20c, complete genome) position: , mismatch: 9, identity: 0.743

actaaaatatgcaaaataatgaataaaaaggagag	CRISPR spacer
ttgattttatgcaaaaaaatgaataaaaaggagta	Protospacer
 . *   ********* **************** .

161. spacer 2.13|564313|35|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448803 (Streptococcus phage Javan551, complete genome) position: , mismatch: 9, identity: 0.743

actaaaatatgcaaaataatgaataaaaaggagag	CRISPR spacer
ttgattttatgcaaaaaaatgaataaaaaggagta	Protospacer
 . *   ********* **************** .

162. spacer 2.13|564313|35|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448982 (Streptococcus phage Javan554, complete genome) position: , mismatch: 9, identity: 0.743

actaaaatatgcaaaataatgaataaaaaggagag	CRISPR spacer
ttaattttatgcaaaaaaatgaataaaaaggagta	Protospacer
 . *   ********* **************** .

163. spacer 2.13|564313|35|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448981 (Streptococcus phage Javan548, complete genome) position: , mismatch: 9, identity: 0.743

actaaaatatgcaaaataatgaataaaaaggagag	CRISPR spacer
ttgattttatgcaaaaaaatgaataaaaaggagta	Protospacer
 . *   ********* **************** .

164. spacer 2.13|564313|35|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK448810 (Streptococcus phage Javan573, complete genome) position: , mismatch: 9, identity: 0.743

actaaaatatgcaaaataatgaataaaaaggagag	CRISPR spacer
ttgattttatgcaaaaaaatgaataaaaaggagta	Protospacer
 . *   ********* **************** .

165. spacer 2.14|564380|33|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054028 (Rhizobium sp. JKLM19E plasmid pPR19E01, complete sequence) position: , mismatch: 9, identity: 0.727

aaaggaagatgagtacttggctagacgacttaa	CRISPR spacer
ttggccagatgagtactcggttagacgacttgg	Protospacer
  .*  ***********.**.**********..

166. spacer 2.15|564445|33|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017076 (Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence) position: , mismatch: 9, identity: 0.727

ctaaagaggtgacggaatgaataaaagcgaaat	CRISPR spacer
ccacggaggtgccggaatgaagaaaagcgcgta	Protospacer
*.* .****** ********* ******* .

167. spacer 2.19|564706|36|NZ_CP046040|CRISPRCasFinder,CRT matches to CP027117 (Bacillus phage EZ-2018a, complete genome) position: , mismatch: 9, identity: 0.75

ctaaaagactttctgattttaaccaaccctgacaac--	CRISPR spacer
ttaaaagattatctgattttaaccaa--caggtagctc	Protospacer
.*******.* ***************  * *..*.*

168. spacer 2.2|563585|33|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017997 (Lactobacillus crustorum strain MN047 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.697

cagagattgatatccaaaaaacaaaatccaatg	CRISPR spacer
ttgaaattgatattcaaaaaacaaaagacgggt	Protospacer
. **.********.************  *..

169. spacer 2.13|564313|35|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032824 (Arcobacter cryaerophilus ATCC 43158 plasmid pACRY43158, complete sequence) position: , mismatch: 11, identity: 0.686

actaaaatatgcaaaataatgaataaaaaggagag	CRISPR spacer
ctcaaaataaggaaaataatgaataaaaatataga	Protospacer
 ..****** * ***************** . ...

170. spacer 2.13|564313|35|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MK715471 (Arcobacter cryaerophilus strain M830MA plasmid pM830MA, complete sequence) position: , mismatch: 11, identity: 0.686

actaaaatatgcaaaataatgaataaaaaggagag	CRISPR spacer
ctcaaaataaggaaaataatgaataaaaatataga	Protospacer
 ..****** * ***************** . ...

171. spacer 2.16|564510|34|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK721197 (Enterococcus phage vB_EfaP_Efmus2, complete genome) position: , mismatch: 11, identity: 0.676

tcagaaacaaatagctgaacaaatgaagatttcc	CRISPR spacer
gtttgaacaaatcgctgaacaaatgatgaactta	Protospacer
 .  .******* ************* ** .*.

172. spacer 2.16|564510|34|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to JQ309827 (Enterococcus phage vB_Efae230P-4, complete genome) position: , mismatch: 11, identity: 0.676

tcagaaacaaatagctgaacaaatgaagatttcc	CRISPR spacer
gtttgaacaaatcgctgaacaaatgatgaactta	Protospacer
 .  .******* ************* ** .*.

173. spacer 2.16|564510|34|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to NC_028693 (Enterococcus phage vB_EfaP_IME195, complete genome) position: , mismatch: 11, identity: 0.676

tcagaaacaaatagctgaacaaatgaagatttcc	CRISPR spacer
gtttgaacaaatcgctgaacaaatgatgaactta	Protospacer
 .  .******* ************* ** .*.

174. spacer 2.16|564510|34|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to NC_049933 (Enterococcus phage vB_EfaP_Ef6.3, complete genome) position: , mismatch: 11, identity: 0.676

tcagaaacaaatagctgaacaaatgaagatttcc	CRISPR spacer
gtttgaacaaattgctgaacaaatgatgaactta	Protospacer
 .  .******* ************* ** .*.

175. spacer 2.16|564510|34|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to LT630001 (Enterococcus phage Idefix genome assembly, chromosome: IDF) position: , mismatch: 11, identity: 0.676

tcagaaacaaatagctgaacaaatgaagatttcc	CRISPR spacer
gtttgaacaaatcgctgaacaaatgatgaactta	Protospacer
 .  .******* ************* ** .*.

176. spacer 2.16|564510|34|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to MK721195 (Enterococcus phage vB_EfaP_Efmus1, complete genome) position: , mismatch: 11, identity: 0.676

tcagaaacaaatagctgaacaaatgaagatttcc	CRISPR spacer
gtttgaacaaatcgctgaacaaatgatgaactta	Protospacer
 .  .******* ************* ** .*.

177. spacer 2.16|564510|34|NZ_CP046040|PILER-CR,CRISPRCasFinder,CRT matches to NC_049936 (Enterococcus phage vB_EfaP_Efmus3, complete genome) position: , mismatch: 11, identity: 0.676

tcagaaacaaatagctgaacaaatgaagatttcc	CRISPR spacer
gtttgaacaaatcgctgaacaaatgatgaactta	Protospacer
 .  .******* ************* ** .*.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

32029 : 42206

Synechococcus_phage(33.33%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014622091.1\|32029_35770_+	phosphoribosylformylglycinamidine synthase	A6N228	Microbacterium_phage	7.4e-38	27.4
WP_014622092.1\|35888_37346_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	2.3e-56	34.2
WP_014622093.1\|37402_38425_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A0E3FGG1	Synechococcus_phage	1.5e-57	40.8
WP_012678772.1\|38421_38979_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	2.6e-24	37.6
WP_014622094.1\|39125_40673_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	1.0e-70	46.7
WP_014622095.1\|41051_42206_-	CHAP domain-containing protein	A0A2H4IZY5	uncultured_Caudovirales_phage	7.9e-07	29.5

DBSCAN-SWA_2

140822 : 201026

Agrobacterium_phage(14.29%)

protease,bacteriocin,holin,transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_038674622.1\|140822_143264_+\|protease	ATP-dependent Clp protease ATP-binding subunit	A0A223W0B1	Agrobacterium_phage	9.8e-124	39.0
WP_111677662.1\|143611_143719_-\|holin	putative holin-like toxin	NA	NA	NA	NA
WP_014622157.1\|144036_144468_+	hypothetical protein	NA	NA	NA	NA
WP_014622158.1\|144688_145120_+	hypothetical protein	NA	NA	NA	NA
WP_014622159.1\|145121_146411_+	hypothetical protein	NA	NA	NA	NA
WP_014622160.1\|146392_146785_+	hypothetical protein	NA	NA	NA	NA
WP_038674620.1\|146765_147056_+	hypothetical protein	NA	NA	NA	NA
WP_012514806.1\|147354_147642_+	co-chaperone GroES	NA	NA	NA	NA
WP_012678897.1\|147709_149335_+	chaperonin GroEL	A0A240F755	uncultured_virus	1.6e-154	54.0
WP_014622162.1\|149668_150139_-	8-oxo-dGTP diphosphatase	NA	NA	NA	NA
WP_014622164.1\|150373_151237_+	Rgg/GadR/MutR family transcriptional regulator	NA	NA	NA	NA
WP_021320278.1\|151573_151864_+\|bacteriocin	circular bacteriocin, circularin A/uberolysin family	NA	NA	NA	NA
WP_014622166.1\|151877_153017_+	hypothetical protein	NA	NA	NA	NA
WP_038674618.1\|153013_153496_+	stage II sporulation protein M	NA	NA	NA	NA
WP_014622167.1\|153492_154080_+	ATP-binding cassette domain-containing protein	NA	NA	NA	NA
WP_038674616.1\|154076_154559_+	hypothetical protein	NA	NA	NA	NA
WP_014622170.1\|154583_155099_+	hypothetical protein	NA	NA	NA	NA
WP_014622173.1\|155731_157366_+	hypothetical protein	NA	NA	NA	NA
WP_014622174.1\|157506_158400_-	RluA family pseudouridine synthase	NA	NA	NA	NA
WP_012677265.1\|158383_158575_-	hypothetical protein	NA	NA	NA	NA
WP_014622175.1\|158809_160564_+	exported protein	NA	NA	NA	NA
WP_014622176.1\|160704_161085_+	RidA family protein	NA	NA	NA	NA
WP_014622177.1\|161122_163444_+	penicillin-binding protein	NA	NA	NA	NA
WP_012677268.1\|163492_163645_+	50S ribosomal protein L33	NA	NA	NA	NA
WP_012677269.1\|163656_163833_+	preprotein translocase subunit SecE	NA	NA	NA	NA
WP_014622178.1\|164209_164755_+	transcription termination/antitermination protein NusG	NA	NA	NA	NA
WP_014622179.1\|165795_167313_+	M protein trans-acting positive regulator	NA	NA	NA	NA
WP_014622180.1\|167487_168666_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_014622181.1\|169254_171756_+\|tRNA	leucine--tRNA ligase	A0A2H4PQS0	Staphylococcus_phage	0.0e+00	65.3
WP_038674613.1\|171929_172262_+	hypothetical protein	NA	NA	NA	NA
WP_148255846.1\|172860_174288_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA
WP_012514830.1\|174402_174681_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_012514831.1\|174897_175383_+	PTS ascorbate transporter subunit IIA	NA	NA	NA	NA
WP_014622185.1\|175480_176143_+	3-keto-L-gulonate-6-phosphate decarboxylase UlaD	NA	NA	NA	NA
WP_014622186.1\|176147_177011_+	L-ribulose-5-phosphate 3-epimerase	NA	NA	NA	NA
WP_014622187.1\|177011_177728_+	L-ribulose-5-phosphate 4-epimerase	NA	NA	NA	NA
WP_148255847.1\|178034_179678_+	PRD domain-containing protein	NA	NA	NA	NA
WP_012514836.1\|179872_180964_+	L-ascorbate 6-phosphate lactonase	NA	NA	NA	NA
WP_014622190.1\|181473_182670_+	glycine betaine/L-proline ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.4e-30	38.5
WP_014622191.1\|182687_184418_+	ABC transporter permease subunit	NA	NA	NA	NA
WP_038674875.1\|184841_187484_+	DNA polymerase I	S5M8J1	Bacillus_phage	1.1e-48	34.0
WP_014622194.1\|187723_188176_+	CoA-binding protein	NA	NA	NA	NA
WP_012677286.1\|188212_188686_+	peroxide-responsive transcriptional repressor PerR	NA	NA	NA	NA
WP_014622196.1\|189046_190750_+	cell surface-anchored sugar-binding protein	NA	NA	NA	NA
WP_038674610.1\|190884_194850_+	YSIRK-type signal peptide-containing protein	NA	NA	NA	NA
WP_014622198.1\|195044_195890_-	DUF975 family protein	NA	NA	NA	NA
WP_038674608.1\|196110_197253_+\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	7.9e-84	42.8
WP_014622390.1\|197317_198577_-\|transposase	ISL3-like element ISSeq1 family transposase	A0A1S5SBP9	Streptococcus_phage	2.4e-166	70.1
WP_080004971.1\|200421_200559_+\|holin	putative holin-like toxin	NA	NA	NA	NA
WP_079993908.1\|200888_201026_+\|holin	putative holin-like toxin	NA	NA	NA	NA

DBSCAN-SWA_3

477251 : 529437

Streptococcus_phage(36.36%)

bacteriocin,tRNA,protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014622411.1\|477251_477725_+\|transposase	IS200/IS605 family transposase	D9CGB6	Hyperthermophilic_Archaeal_Virus_2	1.3e-11	34.2
WP_014622412.1\|478034_478757_-	hypothetical protein	NA	NA	NA	NA
WP_014622413.1\|478947_480579_+	Na/Pi cotransporter family protein	NA	NA	NA	NA
WP_014622414.1\|480695_481844_+	N-acetylglucosamine-6-phosphate deacetylase	NA	NA	NA	NA
WP_038674490.1\|481930_482770_+	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	5.3e-53	40.9
WP_012678399.1\|483008_483392_+	hypothetical protein	NA	NA	NA	NA
WP_014622416.1\|483462_484368_+	hypothetical protein	NA	NA	NA	NA
WP_014622417.1\|484364_485612_+	hypothetical protein	NA	NA	NA	NA
WP_012515130.1\|485631_486264_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.1e-21	32.8
WP_086934960.1\|486547_487063_+	isoprenylcysteine carboxyl methyltransferase family protein	NA	NA	NA	NA
WP_014622419.1\|487429_488341_+\|tRNA	glycine--tRNA ligase subunit alpha	NA	NA	NA	NA
WP_038674487.1\|488710_490750_+\|tRNA	glycine--tRNA ligase subunit beta	NA	NA	NA	NA
WP_012515137.1\|491254_491512_+	DUF896 family protein	NA	NA	NA	NA
WP_012678394.1\|492040_492205_+\|bacteriocin	streptolysin S family bacteriocin	NA	NA	NA	NA
WP_014622422.1\|492432_493383_+	SagB/ThcOx family dehydrogenase	NA	NA	NA	NA
WP_014622423.1\|493379_494444_+	Streptolysin S biosynthesis protein	NA	NA	NA	NA
WP_014622424.1\|494456_495815_+	Streptolysin S biosynthesis protein SagD	NA	NA	NA	NA
WP_021320451.1\|495789_496461_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_014622426.1\|496457_497144_+	hypothetical protein	NA	NA	NA	NA
WP_014622427.1\|497166_498090_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	4.6e-26	33.2
WP_014622428.1\|498098_499226_+	ABC transporter permease	NA	NA	NA	NA
WP_014622429.1\|499222_500341_+	ABC transporter permease	NA	NA	NA	NA
WP_154293413.1\|500473_502057_-	thioester-forming surface-anchored protein	NA	NA	NA	NA
WP_154293414.1\|502372_502663_-	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_154293415.1\|502693_504562_-	thioester-forming surface-anchored protein	NA	NA	NA	NA
WP_014622433.1\|504976_506062_-	hypothetical protein	NA	NA	NA	NA
WP_014622434.1\|506535_507165_-	hypothetical protein	NA	NA	NA	NA
WP_012515154.1\|507375_507930_+	GNAT family N-acetyltransferase	M1PSC3	Streptococcus_phage	9.5e-51	63.2
WP_012679132.1\|508386_508899_+	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	5.3e-40	52.6
WP_014622436.1\|508902_509256_+	arsenate reductase family protein	M1PLC0	Streptococcus_phage	2.9e-37	63.2
WP_012515158.1\|509331_510159_-	exodeoxyribonuclease III	M1PSC0	Streptococcus_phage	1.3e-125	77.7
WP_014622437.1\|510511_515410_+	S8 family serine peptidase	A0A1B0T6A2	Bacillus_phage	2.0e-06	31.9
WP_014622438.1\|515584_517264_+	hypothetical protein	NA	NA	NA	NA
WP_014622441.1\|517798_519049_+	YSIRK signal domain/LPXTG anchor domain surface protein	NA	NA	NA	NA
WP_014622442.1\|519206_519473_+	hypothetical protein	NA	NA	NA	NA
WP_038674480.1\|519435_520134_+	DUF1275 domain-containing protein	NA	NA	NA	NA
WP_038674478.1\|520353_522357_+\|tRNA	methionine--tRNA ligase	A0A1V0SHR2	Klosneuvirus	1.9e-85	34.8
WP_014622445.1\|522914_523808_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_012515166.1\|524160_524301_+	hypothetical protein	NA	NA	NA	NA
WP_021320463.1\|524413_524572_+	hypothetical protein	NA	NA	NA	NA
WP_021320464.1\|524585_524732_+	hypothetical protein	NA	NA	NA	NA
WP_014622446.1\|524754_524922_+\|bacteriocin	class IIb bacteriocin, lactobin A/cerein 7B family	NA	NA	NA	NA
WP_014622411.1\|525191_525665_+\|transposase	IS200/IS605 family transposase	D9CGB6	Hyperthermophilic_Archaeal_Virus_2	1.3e-11	34.2
WP_012515170.1\|528069_529437_+\|bacteriocin	bacteriocin secretion accessory protein	NA	NA	NA	NA

DBSCAN-SWA_4

662355 : 729807

Streptococcus_phage(18.18%)

bacteriocin,tRNA,protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014622548.1\|662355_663384_-\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
WP_012515299.1\|663652_664357_+	glucosamine-6-phosphate deaminase	NA	NA	NA	NA
WP_012515300.1\|664528_665245_+	rRNA pseudouridine synthase	NA	NA	NA	NA
WP_014622549.1\|665336_666314_+	hypothetical protein	NA	NA	NA	NA
WP_014622550.1\|666303_668106_+	oligoendopeptidase F	NA	NA	NA	NA
WP_012678253.1\|668305_668863_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_012678252.1\|668852_669485_+	HAD-IA family hydrolase	NA	NA	NA	NA
WP_012515305.1\|669532_670174_+	HAD family hydrolase	NA	NA	NA	NA
WP_038674443.1\|670255_670963_+	O-methyltransferase	NA	NA	NA	NA
WP_014622552.1\|671025_672027_+	peptidylprolyl isomerase PrsA	NA	NA	NA	NA
WP_012678248.1\|672383_675002_+\|tRNA	alanine--tRNA ligase	A0A1V0SK38	Klosneuvirus	1.9e-61	34.1
WP_014622554.1\|675124_676288_-	DNA/RNA non-specific endonuclease	A7J2B8	Streptococcus_phage	6.2e-76	53.9
WP_014622556.1\|676709_677996_+	polysaccharide deacetylase family protein	NA	NA	NA	NA
WP_014622557.1\|678265_679348_-	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	6.2e-30	29.6
WP_012515313.1\|679444_680071_+	uridine kinase	A0A1V0SAA3	Catovirus	2.0e-36	41.2
WP_080004863.1\|680060_680366_+	DUF1294 domain-containing protein	NA	NA	NA	NA
WP_014622559.1\|680569_681340_-\|protease	PrsW family intramembrane metalloprotease	NA	NA	NA	NA
WP_012515316.1\|681518_682016_+	GAF domain-containing protein	NA	NA	NA	NA
WP_014622560.1\|682015_683692_+	DNA polymerase III subunit gamma/tau	A0A1U9WR94	Streptococcus_virus	3.5e-48	42.7
WP_014622562.1\|684090_684276_+	DUF3272 family protein	NA	NA	NA	NA
WP_014622563.1\|684250_685192_-	bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor	NA	NA	NA	NA
WP_014622565.1\|687291_689511_+	lipoprotein	NA	NA	NA	NA
WP_014622566.1\|689843_691049_+	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	7.6e-138	66.1
WP_014622232.1\|691381_692500_+\|transposase	ISAs1 family transposase	NA	NA	NA	NA
WP_014622568.1\|692642_693902_+	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_014622570.1\|694319_695864_+	glucuronide permease	NA	NA	NA	NA
WP_014622571.1\|695947_696976_+	sugar kinase	NA	NA	NA	NA
WP_014622572.1\|696996_698787_+	beta-glucuronidase	B9U1V4	Vaccinia_virus	2.9e-133	43.6
WP_014622573.1\|698828_699500_+	FadR family transcriptional regulator	NA	NA	NA	NA
WP_038674429.1\|699682_700300_+	bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase	NA	NA	NA	NA
WP_014622575.1\|700330_701728_+	glucuronate isomerase	NA	NA	NA	NA
WP_014622577.1\|701982_703077_+	mannonate dehydratase	NA	NA	NA	NA
WP_012679240.1\|703091_703931_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_038674426.1\|704196_705000_+	HAD family hydrolase	NA	NA	NA	NA
WP_014622580.1\|705123_706914_+	glycosyl hydrolase	NA	NA	NA	NA
WP_014622582.1\|707484_708774_+	YSIRK signal domain/LPXTG anchor domain surface protein	NA	NA	NA	NA
WP_012515336.1\|709072_709627_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_014622583.1\|709619_710903_+	CBS domain-containing protein	NA	NA	NA	NA
WP_014622584.1\|710919_711780_+	methionyl aminopeptidase	NA	NA	NA	NA
WP_014622585.1\|711781_712720_+	YihY/virulence factor BrkB family protein	NA	NA	NA	NA
WP_038674423.1\|712852_714136_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_012679249.1\|714128_714623_+	shikimate kinase	NA	NA	NA	NA
WP_014622587.1\|714820_716251_+	LCP family protein	NA	NA	NA	NA
WP_014622588.1\|716328_717684_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	D0R096	Streptococcus_phage	2.3e-207	78.9
WP_014622589.1\|718694_720845_+	peptide cleavage/export ABC transporter	W8CYL7	Bacillus_phage	1.6e-45	29.0
WP_014622590.1\|720853_722215_+\|bacteriocin	bacteriocin secretion accessory protein	NA	NA	NA	NA
WP_041788144.1\|722593_722866_+	hypothetical protein	NA	NA	NA	NA
WP_014622592.1\|722865_723531_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_154293420.1\|723808_723973_+	hypothetical protein	NA	NA	NA	NA
WP_154293421.1\|724865_727175_+	DUF4135 domain-containing protein	NA	NA	NA	NA
WP_014622596.1\|727164_727878_+	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
WP_154293422.1\|727892_728069_+	hypothetical protein	NA	NA	NA	NA
WP_041788148.1\|728084_728279_+	hypothetical protein	NA	NA	NA	NA
WP_148255836.1\|728294_728477_+	hypothetical protein	NA	NA	NA	NA
WP_014622411.1\|728699_729173_+\|transposase	IS200/IS605 family transposase	D9CGB6	Hyperthermophilic_Archaeal_Virus_2	1.3e-11	34.2
WP_041788153.1\|729342_729807_+\|transposase	IS200/IS605 family transposase	A0A0H3UZM0	Geobacillus_virus	1.7e-16	35.0

DBSCAN-SWA_5

733585 : 771360

Streptococcus_phage(100.0%)

head,portal,protease,tail,holin,terminase,capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000182253.1\|733585_734182_+	hypothetical protein	A0A1B0RXB3	Streptococcus_phage	5.5e-12	29.4
WP_154293424.1\|734389_734899_+	type III toxin-antitoxin system ToxN/AbiQ family toxin	NA	NA	NA	NA
WP_041788167.1\|734943_736899_-	DNA polymerase	E4ZFK1	Streptococcus_phage	0.0e+00	87.4
WP_000105206.1\|737133_737697_-	DUF2815 family protein	A0A1B0RXA9	Streptococcus_phage	5.6e-91	92.3
WP_041788172.1\|737701_738823_-	DUF2800 domain-containing protein	D0R0B3	Streptococcus_phage	7.0e-202	91.1
WP_041788174.1\|738815_739139_-	hypothetical protein	D0R0B4	Streptococcus_phage	6.1e-34	73.8
WP_014622606.1\|739499_741788_+	phage DNA polymerase	A0A1B0RXC5	Streptococcus_phage	0.0e+00	88.1
WP_041788176.1\|742068_742350_+	VRR-NUC domain-containing protein	M1PFY8	Streptococcus_phage	8.5e-40	84.9
WP_041788179.1\|742330_743707_+	DEAD/DEAH box helicase	A0A1X9I6B0	Streptococcus_phage	6.5e-234	88.0
WP_014622610.1\|743699_744176_+	hypothetical protein	A0A1B0RXB9	Streptococcus_phage	4.1e-71	83.5
WP_000166942.1\|744370_744553_+	hypothetical protein	A0A1B0RXC3	Streptococcus_phage	2.0e-21	88.3
WP_041788184.1\|744600_745638_+	methionine adenosyltransferase	E4ZFL0	Streptococcus_phage	1.1e-169	85.2
WP_041788187.1\|745639_745999_+	HNH endonuclease	A0A1B0RXJ3	Streptococcus_phage	6.5e-61	87.4
WP_014622612.1\|746038_746584_+	hypothetical protein	NA	NA	NA	NA
WP_041788189.1\|746763_747219_+	hypothetical protein	A0A1X9I6V0	Streptococcus_phage	3.5e-51	62.1
WP_041788190.1\|747190_748438_+	DNA modification methylase	A0A1B0RXE5	Streptococcus_phage	1.2e-223	90.6
WP_000290864.1\|748442_748916_+\|terminase	phage terminase small subunit P27 family	A0A1B0RXI5	Streptococcus_phage	4.5e-86	98.7
WP_014622615.1\|748912_750505_+\|terminase	terminase large subunit	A0A1B0RXJ8	Streptococcus_phage	5.9e-311	96.6
WP_014622616.1\|750575_750833_+	type II toxin-antitoxin system Phd/YefM family antitoxin	E4ZFM1	Streptococcus_phage	4.0e-36	95.3
WP_000699094.1\|750829_751201_+	type II toxin-antitoxin system death-on-curing family toxin	D0R0D2	Streptococcus_phage	2.7e-57	91.9
WP_000888907.1\|751785_751974_+	hypothetical protein	A0A1B0RXD0	Streptococcus_phage	2.8e-07	42.9
WP_041788197.1\|752030_753320_+\|portal	phage portal protein	D0R0D3	Streptococcus_phage	1.3e-228	89.7
WP_014622620.1\|753312_754011_+\|protease	Clp protease ClpP	A0A1B0RXE1	Streptococcus_phage	5.8e-106	83.6
WP_014622621.1\|754024_755230_+\|capsid	phage major capsid protein	E4ZFM5	Streptococcus_phage	1.7e-209	90.0
WP_014622622.1\|755229_755487_+\|head,tail	phage gp6-like head-tail connector protein	A0A1X9I695	Streptococcus_phage	1.1e-25	69.4
WP_014622623.1\|755486_755825_+\|head,tail	head-tail adaptor protein	A0A1B0RXE4	Streptococcus_phage	6.6e-39	70.5
WP_014622624.1\|755817_756186_+	hypothetical protein	A0A1X9I688	Streptococcus_phage	9.1e-34	59.0
WP_014622625.1\|756194_756521_+	hypothetical protein	M1Q1Z4	Streptococcus_phage	1.3e-39	69.4
WP_014622626.1\|756523_757093_+	hypothetical protein	A0A1B0RXE2	Streptococcus_phage	5.6e-99	95.2
WP_041788199.1\|757104_757524_+	hypothetical protein	A0A1X9I691	Streptococcus_phage	1.9e-56	77.0
WP_014622629.1\|757706_760826_+\|tail	tail tape measure protein	Q6DMT2	Streptococcus_phage	7.3e-257	71.3
WP_041788206.1\|760822_761548_+\|tail	phage tail protein	Q6DMT1	Streptococcus_phage	4.7e-82	58.8
WP_041788208.1\|761547_764463_+	carbamoylsarcosine amidase	Q6DMT0	Streptococcus_phage	0.0e+00	65.0
WP_041788211.1\|764475_766332_+	prophage minor structural protein	Q6DMS9	Streptococcus_phage	7.1e-260	73.8
WP_014622633.1\|766349_766754_+\|holin	phage holin family protein	D0R0E9	Streptococcus_phage	6.0e-47	76.3
WP_014622634.1\|766755_768225_+	LysM peptidoglycan-binding domain-containing protein	E4ZFN7	Streptococcus_phage	1.5e-215	76.1
WP_080004974.1\|768379_768487_+\|holin	putative holin-like toxin	NA	NA	NA	NA
WP_014622635.1\|768863_770105_+	recombinase family protein	A0A1B0RXM0	Streptococcus_phage	1.2e-173	72.9
WP_080004990.1\|770043_771360_+	recombinase family protein	D0R0F3	Streptococcus_phage	1.9e-230	89.3

DBSCAN-SWA_6

1077174 : 1135540

Streptococcus_phage(15.38%)

bacteriocin,integrase,transposase,tRNA

attL 1084019:1084036|attR 1134302:1134319

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012679509.1\|1077174_1077375_+\|bacteriocin	ComC/BlpC family leader-containing pheromone/bacteriocin	NA	NA	NA	NA
WP_012515593.1\|1077441_1078296_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	4.3e-26	35.6
WP_014622845.1\|1078301_1079465_+	ABC transporter permease subunit	NA	NA	NA	NA
WP_012515596.1\|1079726_1079957_+\|bacteriocin	bacteriocin	NA	NA	NA	NA
WP_080004977.1\|1080826_1081108_+\|bacteriocin	lactococcin 972 family bacteriocin	NA	NA	NA	NA
WP_049780539.1\|1082461_1083229_+	DUF1430 domain-containing protein	NA	NA	NA	NA
1084019:1084036	attL	NA	NA	NA	NA
WP_014622846.1\|1084455_1085310_+	ribosome biogenesis GTPase YlqF	NA	NA	NA	NA
WP_038674821.1\|1085299_1086073_+	ribonuclease HII	G4YAY0	Emiliania_huxleyi_virus	1.5e-25	37.7
WP_012515603.1\|1086328_1087174_+	DNA-protecting protein DprA	NA	NA	NA	NA
WP_154293440.1\|1087274_1089407_+	type I DNA topoisomerase	A0A1V0SB35	Catovirus	1.5e-99	34.2
WP_038674303.1\|1089521_1090169_+	DNA-binding protein	NA	NA	NA	NA
WP_012677971.1\|1090189_1090903_+	DUF3307 domain-containing protein	NA	NA	NA	NA
WP_014622851.1\|1091277_1092612_+\|tRNA	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	NA	NA	NA	NA
WP_014622852.1\|1092655_1093705_-	[citrate (pro-3S)-lyase] ligase	NA	NA	NA	NA
WP_038674300.1\|1093971_1095033_+	ammonia monooxygenase	NA	NA	NA	NA
WP_014622854.1\|1095118_1096003_-	triphosphoribosyl-dephospho-CoA synthase CitG	NA	NA	NA	NA
WP_012515611.1\|1095995_1096691_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_012677966.1\|1096841_1098245_-	CitMHS family transporter	NA	NA	NA	NA
WP_014622855.1\|1098626_1098971_+	hypothetical protein	NA	NA	NA	NA
WP_014622856.1\|1098988_1099384_+	acetyl-CoA carboxylase biotin carboxyl carrier protein subunit	NA	NA	NA	NA
WP_012515616.1\|1099433_1100555_+	sodium ion-translocating decarboxylase subunit beta	NA	NA	NA	NA
WP_154293441.1\|1100736_1101045_+	citrate lyase acyl carrier protein	NA	NA	NA	NA
WP_038674298.1\|1101032_1101920_+	citrate (pro-3S)-lyase subunit beta	NA	NA	NA	NA
WP_014622859.1\|1101921_1103454_+	citrate lyase subunit alpha	NA	NA	NA	NA
WP_014622860.1\|1103446_1104007_+	citrate lyase holo-[acyl-carrier protein] synthase	NA	NA	NA	NA
WP_014622861.1\|1104037_1105429_+	oxaloacetate decarboxylase subunit alpha	NA	NA	NA	NA
WP_014622862.1\|1105694_1106174_-	hypothetical protein	NA	NA	NA	NA
WP_012515624.1\|1106504_1107257_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.8e-29	35.8
WP_014622411.1\|1107674_1108148_-\|transposase	IS200/IS605 family transposase	D9CGB6	Hyperthermophilic_Archaeal_Virus_2	1.3e-11	34.2
WP_014622864.1\|1110009_1110675_+	response regulator transcription factor	NA	NA	NA	NA
WP_014622865.1\|1110671_1111649_+	sensor histidine kinase	NA	NA	NA	NA
WP_014622866.1\|1111785_1112856_-	tyrosine recombinase XerS	A0A1B1IQT7	uncultured_Mediterranean_phage	3.6e-06	28.7
WP_012515629.1\|1113012_1113450_-	sugar translocase	NA	NA	NA	NA
WP_014622867.1\|1114721_1115420_+	helix-turn-helix transcriptional regulator	E8ZDN4	Streptococcus_phage	1.2e-58	49.0
WP_012515631.1\|1115750_1116545_-	hypothetical protein	NA	NA	NA	NA
WP_148255840.1\|1116908_1117787_-	DUF4868 domain-containing protein	NA	NA	NA	NA
WP_014622869.1\|1117761_1118235_-	hypothetical protein	NA	NA	NA	NA
WP_038674817.1\|1121470_1122373_-	hypothetical protein	NA	NA	NA	NA
WP_014622872.1\|1122391_1123324_-	hypothetical protein	NA	NA	NA	NA
WP_038674294.1\|1125102_1125309_-	helix-turn-helix transcriptional regulator	A0A2K5B261	Erysipelothrix_phage	1.0e-13	58.7
WP_148255841.1\|1125467_1126592_-	relaxase/mobilization nuclease domain-containing protein	NA	NA	NA	NA
WP_014622875.1\|1126710_1128513_-	maturase	A0A0U4J920	Pseudomonas_phage	6.3e-27	30.8
WP_038674289.1\|1129411_1129792_-	plasmid mobilization relaxosome protein MobC	NA	NA	NA	NA
WP_038674287.1\|1130112_1131504_-	virulence-associated protein E	A0A0A7RTG3	Clostridium_phage	9.4e-39	34.6
WP_014622879.1\|1131496_1132426_-	phage DNA-polymerase or DNA-primase	A0A1V0DYH9	Shewanella_phage	2.5e-11	34.5
WP_014622880.1\|1132533_1132917_-	hypothetical protein	NA	NA	NA	NA
WP_038674815.1\|1132909_1133986_-\|integrase	site-specific integrase	Q8SBN2	Clostridium_phage	1.8e-85	45.5
WP_038674813.1\|1133992_1134172_-	hypothetical protein	NA	NA	NA	NA
WP_014622678.1\|1134280_1135540_-\|transposase	ISL3-like element ISSeq1 family transposase	A0A1S5SBP9	Streptococcus_phage	8.2e-167	70.3
1134302:1134319	attR	NA	NA	NA	NA

DBSCAN-SWA_7

1198874 : 1250887

Bacillus_phage(35.29%)

tRNA,protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014622678.1\|1198874_1200134_+\|transposase	ISL3-like element ISSeq1 family transposase	A0A1S5SBP9	Streptococcus_phage	8.2e-167	70.3
WP_014622933.1\|1200349_1203358_-	leucine-rich repeat domain-containing protein	NA	NA	NA	NA
WP_014622411.1\|1203787_1204261_-\|transposase	IS200/IS605 family transposase	D9CGB6	Hyperthermophilic_Archaeal_Virus_2	1.3e-11	34.2
WP_012677890.1\|1204470_1205070_-	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA
WP_038674257.1\|1205079_1206309_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	4.1e-139	62.0
WP_012515696.1\|1206344_1206515_-	hypothetical protein	NA	NA	NA	NA
WP_038674254.1\|1206534_1207032_-	dihydrofolate reductase	V9LZM6	Vibrio_phage	4.0e-16	29.6
WP_014622940.1\|1207112_1207952_-	thymidylate synthase	U5J9N5	Bacillus_phage	5.6e-79	51.4
WP_014622941.1\|1208136_1209315_+	hydroxymethylglutaryl-CoA synthase	NA	NA	NA	NA
WP_014622942.1\|1209298_1210585_+	hydroxymethylglutaryl-CoA reductase, degradative	NA	NA	NA	NA
WP_038674253.1\|1210869_1211862_-	type 2 isopentenyl-diphosphate Delta-isomerase	NA	NA	NA	NA
WP_148255842.1\|1211864_1212911_-	phosphomevalonate kinase	NA	NA	NA	NA
WP_014622945.1\|1212855_1213800_-	diphosphomevalonate decarboxylase	NA	NA	NA	NA
WP_014622946.1\|1213781_1214660_-	mevalonate kinase	NA	NA	NA	NA
WP_014622947.1\|1215190_1216942_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	2.0e-33	26.4
WP_038674251.1\|1216943_1218665_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	4.3e-41	28.1
WP_014622949.1\|1219113_1221120_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_038674249.1\|1221310_1221739_-	peptide deformylase	NA	NA	NA	NA
WP_012515710.1\|1221851_1223201_-	NADP-specific glutamate dehydrogenase	NA	NA	NA	NA
WP_014622951.1\|1223341_1225114_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	2.5e-52	29.2
WP_038674246.1\|1225113_1226859_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	3.2e-36	24.1
WP_014622953.1\|1226963_1228832_-	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	1.1e-61	30.7
WP_080004980.1\|1228824_1230039_-\|tRNA	CCA tRNA nucleotidyltransferase	H7BUW3	unidentified_phage	2.2e-39	46.0
WP_014622955.1\|1230135_1230984_-	DegV family protein	NA	NA	NA	NA
WP_037580974.1\|1230983_1231364_-	DUF1149 family protein	NA	NA	NA	NA
WP_012677869.1\|1231580_1232291_-	glycoside hydrolase family 73 protein	A0A088F6W1	Sulfitobacter_phage	2.7e-05	36.2
WP_014622957.1\|1232732_1233992_+\|transposase	ISL3-like element ISSeq1 family transposase	A0A1S5SBP9	Streptococcus_phage	1.8e-166	70.1
WP_014622958.1\|1234160_1235519_-	di- and tricarboxylate transporter	NA	NA	NA	NA
WP_014622960.1\|1235925_1236156_-	hypothetical protein	NA	NA	NA	NA
WP_012677866.1\|1236696_1236894_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_014622962.1\|1237453_1238053_-	glycoside hydrolase family 73 protein	A0A249Y0X5	Enterococcus_phage	2.7e-11	33.6
WP_014622963.1\|1238641_1240588_-	PTS fructose transporter subunit IIABC	NA	NA	NA	NA
WP_014622964.1\|1240584_1241496_-	1-phosphofructokinase	NA	NA	NA	NA
WP_014622965.1\|1241492_1242206_-	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA
WP_014622966.1\|1242641_1243565_-	2-dehydropantoate 2-reductase	NA	NA	NA	NA
WP_012515728.1\|1243576_1244635_-	PTS transporter subunit IIC	NA	NA	NA	NA
WP_014622967.1\|1244767_1245760_-	NAD(P)/FAD-dependent oxidoreductase	Q9JRK7	Streptococcus_phage	1.8e-28	51.6
WP_014622968.1\|1245759_1246491_-\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_014622969.1\|1246480_1246999_-	ribosome maturation factor RimM	NA	NA	NA	NA
WP_148255852.1\|1247397_1248629_-\|transposase	IS3-like element ISSeq3 family transposase	A0A1B1P773	Bacillus_phage	1.2e-64	52.3
WP_014622678.1\|1249627_1250887_+\|transposase	ISL3-like element ISSeq1 family transposase	A0A1S5SBP9	Streptococcus_phage	8.2e-167	70.3

DBSCAN-SWA_8

1660455 : 1739471

Streptococcus_phage(33.33%)

bacteriocin,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_148255853.1\|1660455_1661696_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	5.2e-65	51.1
WP_154293450.1\|1661950_1662553_-	L,D-transpeptidase family protein	NA	NA	NA	NA
WP_014623308.1\|1662647_1665299_-\|tRNA	valine--tRNA ligase	A0A1V0S951	Catovirus	2.7e-151	41.1
WP_012516076.1\|1665311_1665875_-	hypothetical protein	NA	NA	NA	NA
WP_012516077.1\|1666074_1666659_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_154293451.1\|1666655_1666880_-	hypothetical protein	NA	NA	NA	NA
WP_012516079.1\|1666918_1667419_-	hypothetical protein	NA	NA	NA	NA
WP_012516080.1\|1667440_1667695_-	DUF1912 family protein	NA	NA	NA	NA
WP_014623312.1\|1668404_1668575_-	hypothetical protein	NA	NA	NA	NA
WP_012516082.1\|1669011_1669767_+	3-deoxy-7-phosphoheptulonate synthase	NA	NA	NA	NA
WP_014623313.1\|1669801_1670908_+	3-dehydroquinate synthase	NA	NA	NA	NA
WP_012516087.1\|1671238_1672012_-	nucleoside phosphorylase	F5CA76	Streptococcus_phi-m46.1-like_phage	5.8e-22	39.6
WP_014623314.1\|1672137_1673022_-	shikimate dehydrogenase	NA	NA	NA	NA
WP_014623315.1\|1673172_1676616_-	glycoside hydrolase family 2 protein	NA	NA	NA	NA
WP_014623316.1\|1676629_1678114_-	response regulator transcription factor	NA	NA	NA	NA
WP_014623317.1\|1678113_1679838_-	sensor histidine kinase	NA	NA	NA	NA
WP_038674074.1\|1679827_1680433_-	DUF624 domain-containing protein	NA	NA	NA	NA
WP_014623319.1\|1680780_1682226_-	extracellular solute-binding protein	NA	NA	NA	NA
WP_014623320.1\|1682309_1683236_-	carbohydrate ABC transporter permease	NA	NA	NA	NA
WP_012677529.1\|1683245_1684196_-	sugar ABC transporter permease	NA	NA	NA	NA
WP_038674756.1\|1684409_1685303_+	ROK family protein	NA	NA	NA	NA
WP_014623322.1\|1685290_1687465_+	alpha-1,2-mannosidase	NA	NA	NA	NA
WP_014623324.1\|1687711_1689103_-	glycoside hydrolase family 1 protein	A0A0B5JD41	Pandoravirus	4.7e-38	26.8
WP_014623325.1\|1689129_1690824_-	beta-N-acetylglucosaminidase	NA	NA	NA	NA
WP_014623326.1\|1690838_1691897_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_038674072.1\|1692029_1693316_+	glycoside hydrolase family 125 protein	NA	NA	NA	NA
WP_038674069.1\|1693330_1696057_+	alpha-mannosidase	NA	NA	NA	NA
WP_014623329.1\|1696245_1696854_-	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	1.9e-20	34.6
WP_038674064.1\|1696850_1698854_-	ABC transporter permease	NA	NA	NA	NA
WP_038674062.1\|1699644_1700226_-	N-acetyltransferase	NA	NA	NA	NA
WP_014623333.1\|1700479_1700893_-	hypothetical protein	NA	NA	NA	NA
WP_080004985.1\|1701554_1701740_-\|bacteriocin	bacteriocin BlpN	NA	NA	NA	NA
WP_014623335.1\|1701763_1702018_-\|bacteriocin	bacteriocin	NA	NA	NA	NA
WP_148255845.1\|1702754_1703060_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_014623337.1\|1703060_1703309_-\|bacteriocin	garvicin Q family class II bacteriocin	NA	NA	NA	NA
WP_014623338.1\|1703462_1703759_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_038674059.1\|1703758_1703977_-\|bacteriocin	bacteriocin	NA	NA	NA	NA
WP_014623340.1\|1704235_1706392_+	peptide cleavage/export ABC transporter	W8CYL7	Bacillus_phage	2.6e-43	27.7
WP_038674057.1\|1706402_1707761_+\|bacteriocin	bacteriocin secretion accessory protein	NA	NA	NA	NA
WP_014623342.1\|1707860_1707995_+\|bacteriocin	ComC/BlpC family leader-containing pheromone/bacteriocin	NA	NA	NA	NA
WP_038674055.1\|1708113_1709448_-	GHKL domain-containing protein	NA	NA	NA	NA
WP_014623345.1\|1709447_1710197_-	response regulator transcription factor	NA	NA	NA	NA
WP_038674052.1\|1710830_1711025_-\|bacteriocin	class IIb bacteriocin, lactobin A/cerein 7B family	NA	NA	NA	NA
WP_038674051.1\|1711041_1711299_-\|bacteriocin	ThmA bacteriocin	NA	NA	NA	NA
WP_014623348.1\|1711619_1712987_-	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	A0A2K5B251	Erysipelothrix_phage	9.2e-71	32.7
WP_012516123.1\|1712983_1713952_-	hypothetical protein	NA	NA	NA	NA
WP_012516130.1\|1714015_1714792_+	recombination regulator RecX	NA	NA	NA	NA
WP_012516131.1\|1715024_1715558_+	DUF402 domain-containing protein	NA	NA	NA	NA
WP_012677504.1\|1715807_1716119_+	DUF960 domain-containing protein	NA	NA	NA	NA
WP_014623460.1\|1717211_1718495_+\|transposase	ISL3-like element ISSeq1 family transposase	A0A1S5SBP9	Streptococcus_phage	3.2e-166	70.1
WP_014623350.1\|1724130_1724679_-	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
WP_038674048.1\|1724754_1725420_-	ComF family protein	NA	NA	NA	NA
WP_014623352.1\|1725394_1726717_-	DEAD/DEAH box helicase	A0A1X9I5S6	Streptococcus_phage	6.5e-122	52.3
WP_014623353.1\|1726772_1727414_+	YigZ family protein	A0A1X9I5T8	Streptococcus_phage	4.3e-63	58.9
WP_014623354.1\|1727534_1728461_+	cysteine synthase A	A0A1X9I5F1	Streptococcus_phage	6.3e-140	82.3
WP_014623356.1\|1728874_1729237_-	S1 RNA-binding domain-containing protein	NA	NA	NA	NA
WP_038674046.1\|1729236_1730637_-	Cof-type HAD-IIB family hydrolase	A0A1V0S9I2	Catovirus	6.6e-24	41.7
WP_021321066.1\|1730670_1731312_-	response regulator transcription factor	NA	NA	NA	NA
WP_012516143.1\|1731304_1732309_-	sensor histidine kinase	NA	NA	NA	NA
WP_012679994.1\|1732305_1732998_-	transporter	NA	NA	NA	NA
WP_014622390.1\|1733199_1734459_+\|transposase	ISL3-like element ISSeq1 family transposase	A0A1S5SBP9	Streptococcus_phage	2.4e-166	70.1
WP_138119682.1\|1734553_1736449_-	Stk1 family PASTA domain-containing Ser/Thr kinase	A0A1B1IUU3	uncultured_Mediterranean_phage	7.5e-23	36.3
WP_012516146.1\|1736445_1737186_-	Stp1/IreP family PP2C-type Ser/Thr phosphatase	NA	NA	NA	NA
WP_154293457.1\|1737223_1738546_-	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	NA	NA	NA	NA
WP_012677492.1\|1738535_1739471_-\|tRNA	methionyl-tRNA formyltransferase	E3SNR5	Prochlorococcus_phage	8.9e-09	37.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP046040

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection