CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP046027	Neisseria brasiliensis strain N.177.16 chromosome, complete genome	2 crisprs	c2c9_V-U4,DEDDh,csa3,DinG,TnsE_C,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,WYL	1	5	14	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP046027_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046027_1

133231-133304

Orphan

Consensus_repeat	Method
CGAAACCCCTCAGCCCGAGCAAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP046027_1

>merge|NZ_CP046027|1|133231-133304|CRISPRCasFinder
CGAAACCCCTCAGCCCGAGCAACCGGCCACACCGGCAACCGAAACCAAGCCCGAAACCCCTCAGCCCGAGCAGC

>NZ_CP046027|1|1|133231-133304|CRISPRCasFinder
CGAAACCCCTCAGCCCGAGCAAC	CGGCCACACCGGCAACCGAAACCAAGCC
CGAAACCCCTCAGCCCGAGCAGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046027.1\|WP_100562987.1\|128198_129407_+\|DUF4102-domain-containing-protein	unknown	unknown	gnl\|CDD\|170049
NZ_CP046027.1\|WP_095501811.1\|120107_120704_+\|RdgB/HAM1-family-non-canonical-purine-NTP-pyrophosphatase	unknown	unknown	gnl\|CDD\|234648
NZ_CP046027.1\|WP_100562985.1\|136073_136472_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|374892
NZ_CP046027.1\|WP_100562991.1\|120758_121979_+\|oxygen-independent-coproporphyrinogen-III-oxidase-like-protein	unknown	unknown	gnl\|CDD\|236346
NZ_CP046027.1\|WP_095501828.1\|137973_138198_+\|TraR/DksA-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|222775
NZ_CP046027.1\|WP_095501827.1\|137719_137953_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046027.1\|WP_095501815.1\|124132_125302_+\|nitronate-monooxygenase	unknown	unknown	gnl\|CDD\|224981
NZ_CP046027.1\|WP_095501822.1\|135353_135839_+\|head-completion/stabilization-protein	unknown	unknown	gnl\|CDD\|368674
NZ_CP046027.1\|WP_095501821.1\|134574_135234_+\|terminase	unknown	unknown	gnl\|CDD\|222861
NZ_CP046027.1\|WP_095501814.1\|122659_123496_+\|symmetrical-bis(5'-nucleosyl)-tetraphosphatase	unknown	unknown	gnl\|CDD\|234673
NZ_CP046027.1\|WP_095501820.1\|133517_134522_+\|phage-major-capsid-protein,-P2-family	unknown	unknown	gnl\|CDD\|368296
NZ_CP046027.1\|WP_100562983.1\|136845_137328_+\|lysozyme	unknown	unknown	gnl\|CDD\|381599
NZ_CP046027.1\|WP_095501823.1\|135850_136069_+\|phage-tail-protein	unknown	unknown	gnl\|CDD\|227337
NZ_CP046027.1\|WP_095501818.1\|129714_130710_-\|phage-portal-protein	unknown	unknown	gnl\|CDD\|222860
NZ_CP046027.1\|WP_100562989.1\|125613_126798_+\|succinyldiaminopimelate-transaminase	unknown	unknown	gnl\|CDD\|236393
NZ_CP046027.1\|WP_154143186.1\|137393_137708_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046027.1\|WP_095501817.1\|126944_127724_+\|peroxide-stress-protein-YaaA	unknown	unknown	gnl\|CDD\|234999
NZ_CP046027.1\|WP_154212831.1\|138172_138646_+\|phage-tail-protein	unknown	unknown	gnl\|CDD\|369126
NZ_CP046027.1\|WP_095501813.1\|122156_122546_+\|RidA-family-protein	unknown	unknown	gnl\|CDD\|129116
NZ_CP046027.1\|WP_095501819.1\|130721_132551_-\|oxidoreductase	unknown	unknown	gnl\|CDD\|222859

Protein	Function_ID	Function_description	E-value
NZ_CP046027.1\|WP_100562987.1\|128198_129407_+\|DUF4102-domain-containing-protein	gnl\|CDD\|170049	PRK09692, PRK09692, integrase; Provisional.	8.20869e-54
NZ_CP046027.1\|WP_095501811.1\|120107_120704_+\|RdgB/HAM1-family-non-canonical-purine-NTP-pyrophosphatase	gnl\|CDD\|234648	PRK00120, PRK00120, dITP/XTP pyrophosphatase; Reviewed.	1.3786e-104
NZ_CP046027.1\|WP_100562985.1\|136073_136472_+\|hypothetical-protein	gnl\|CDD\|374892	pfam16931, Phage_holin_8, Putative phage holin.	0.000284125
NZ_CP046027.1\|WP_100562991.1\|120758_121979_+\|oxygen-independent-coproporphyrinogen-III-oxidase-like-protein	gnl\|CDD\|236346	PRK08898, PRK08898, oxygen-independent coproporphyrinogen III oxidase-like protein.	0
NZ_CP046027.1\|WP_095501828.1\|137973_138198_+\|TraR/DksA-family-transcriptional-regulator	gnl\|CDD\|222775	PHA00080, PHA00080, DksA-like zinc finger domain containing protein.	1.89397e-17
NZ_CP046027.1\|WP_095501815.1\|124132_125302_+\|nitronate-monooxygenase	gnl\|CDD\|224981	COG2070, COG2070, Dioxygenases related to 2-nitropropane dioxygenase [General function prediction only].	1.36485e-70
NZ_CP046027.1\|WP_095501822.1\|135353_135839_+\|head-completion/stabilization-protein	gnl\|CDD\|368674	pfam05926, Phage_GPL, Phage head completion protein (GPL). This family consists of several phage head completion protein (GPL) as well as related bacterial sequences. Members of this family allow the completion of filled heads by rendering newly packaged DNA in the heads resistant to DNase. The protein is thought to bind to DNA filled capsids.	5.75432e-42
NZ_CP046027.1\|WP_095501821.1\|134574_135234_+\|terminase	gnl\|CDD\|222861	PHA02537, M, terminase endonuclease subunit; Provisional.	7.16157e-33
NZ_CP046027.1\|WP_095501814.1\|122659_123496_+\|symmetrical-bis(5'-nucleosyl)-tetraphosphatase	gnl\|CDD\|234673	PRK00166, apaH, symmetrical bis(5'-nucleosyl)-tetraphosphatase.	7.23e-149
NZ_CP046027.1\|WP_095501820.1\|133517_134522_+\|phage-major-capsid-protein,-P2-family	gnl\|CDD\|368296	pfam05125, Phage_cap_P2, Phage major capsid protein, P2 family.	9.31217e-135
NZ_CP046027.1\|WP_100562983.1\|136845_137328_+\|lysozyme	gnl\|CDD\|381599	cd00737, lyz_endolysin_autolysin, endolysin and autolysin. The dsDNA phages of eubacteria use endolysins or muralytic enzymes in conjunction with hollin, a small membrane protein, to degrade the peptidoglycan found in bacterial cell walls. Similarly, bacteria produce autolysins to facilitate the biosynthesis of its cell wall heteropolymer peptidoglycan and cell division. Endolysins and autolysins are found in viruses and bacteria, respectively. Both endolysin and autolysin enzymes cleave the glycosidic beta 1,4-bonds between the N-acetylmuramic acid and the N-acetylglucosamine of the peptidoglycan.	5.54197e-50
NZ_CP046027.1\|WP_095501823.1\|135850_136069_+\|phage-tail-protein	gnl\|CDD\|227337	COG5004, COG5004, P2-like prophage tail protein X [General function prediction only].	6.92961e-08
NZ_CP046027.1\|WP_095501818.1\|129714_130710_-\|phage-portal-protein	gnl\|CDD\|222860	PHA02536, Q, portal vertex protein; Provisional.	7.36499e-135
NZ_CP046027.1\|WP_100562989.1\|125613_126798_+\|succinyldiaminopimelate-transaminase	gnl\|CDD\|236393	PRK09147, PRK09147, succinyldiaminopimelate transaminase; Provisional.	0
NZ_CP046027.1\|WP_095501817.1\|126944_127724_+\|peroxide-stress-protein-YaaA	gnl\|CDD\|234999	PRK02101, PRK02101, peroxide stress protein YaaA.	1.10371e-139
NZ_CP046027.1\|WP_154212831.1\|138172_138646_+\|phage-tail-protein	gnl\|CDD\|369126	pfam06891, P2_Phage_GpR, P2 phage tail completion protein R (GpR). This family consists of P2 phage tail completion protein R (GpR) like sequences. GpR is thought to be a tail completion protein which is essential for stable head joining.	6.14368e-28
NZ_CP046027.1\|WP_095501813.1\|122156_122546_+\|RidA-family-protein	gnl\|CDD\|129116	TIGR00004, RutC_family_protein, reactive intermediate/imine deaminase. This protein was described initially as an inhibitor of protein synthesis intiation, then as an endoribonuclease active on single-stranded mRNA, endoribonuclease L-PSP. Members of this family, conserved in all domains of life and often with several members per bacterial genome, appear to catalyze a reaction that minimizes toxic by-products from reactions catalyzed by pyridoxal phosphate-dependent enzymes. [Cellular processes, Other].	6.25226e-60
NZ_CP046027.1\|WP_095501819.1\|130721_132551_-\|oxidoreductase	gnl\|CDD\|222859	PHA02535, P, terminase ATPase subunit; Provisional.	0

>NZ_CP046027.1|WP_095501819.1|130721_132551_-|oxidoreductase
MEKRNQVEIAANIDPRTVARSLYWQGWRISAIGRHLGIKPATVHSWKQRENWDGGSPIQRVAASVEARLIQLIHLPKKSDGDYKEIRQLSGLIQGAAEKMPSEKSAAKPSAEKFIADLTDNIPTIDNPPRERAERGRDAKERPAGKPHKNFLHPDQIKRMEEIFIEQSFGYQRFWNQQYGKRRFRNLLKSRQIGATFYFAREAFLNSLKTGINSIFLSASRAQAYYFRRYILDLAAMVDAELKGGDVIQLHNGAELYFLGTNSRTAQGRNGNLYVDEYFWIEDFENLRKLASPMASQAHLKTTYFSTPSYEAHPAYTFWSGEFYNKNRPKNEHISLDVSPAALKHGRLDPDGQFRHVVTIHDALTDGCHLFNIDDLRREYPPHEFRQLFECEFVAAKDGVFDFAELQKCGVDSWDAWADWYKSFAPKPCGDAPVWIGYDPSHTGDAAGLVVATAPVRGRDKFCVVQKTLLQGADFESQAAFIRNLLSVYNVQKIVIDSNGIGVAVADLVKKFFPGVICMTYTPEIKGLMVLKMLNLLKNRRVEWDGGDIDMQMAFLSVRRTMTASGRHMTYETARTKEASHGDLAWAAMMLFYQEPLDGVAHGRVEIDS
>NZ_CP046027.1|WP_095501818.1|129714_130710_-|phage-portal-protein
MSIETKKTDVEVFSWGTDERVNWLSDLWECVDNGKYYEPPINLNDLVALLRAGIHHASALQCKLNVLTATFEPTKWLSRAEFKKLAFGFLVLGNGYLQVERNRLGQPLKLKNRLGLYMRRASHKEGYYYMRRHVVCDDDFIPAGDVVHLIQPDLSQEVYGVPDYLSGMSSAELNRSATTFRRRYYDNGSHAGFIVYATDNNLNEEDWANLKQQFKQAQREGNFKNVFLRSPNGGQDGIKLIPISEVAAKDEFINIKNTTAQDMLTIHRVPPALMGVVPQAAGGLGDARTAAEVFAANEIEPIQTAFLEANEQLGAEVFKFKPYSLAVSANK
>NZ_CP046027.1|WP_100562987.1|128198_129407_+|DUF4102-domain-containing-protein
MPKIVTPLTLAQVKAARAKDKVYKLPDGGGLALWVLPSGKKSWRIQFKRPDDGRADTLTLGMFPKFGLADARTWREEVLRKIAAGENPKLTSEDVAARYRFENCMVDWFERWARGGGKMGKGKSEKYARQILAALEINVLPVFKGRDIRKIKTADVVDVLRKMEERGVLEYLRRVKSSLNLMFDYFVASGTIETNPVSIIGRQVFDRAPSRHFAALKPEDLPMLIEKIETTEGIGERARLLIYWQLLSMTRPSEAAGTMLAEIDLSRKVWEIPLARMKTRPHVVPLSSALLQIYQEAIKLNVAGIYLFEGRGYVKAIDRETVRLKLRSKMKIETTAHGLRSLARTYLREVHKIQRDVGELLLSHGVGDKTERAYDRSELLDERREALELWGQDVMALRQKYR
>NZ_CP046027.1|WP_095501817.1|126944_127724_+|peroxide-stress-protein-YaaA
MFFVLSPAKNLNEKDSAPIQEFTQPDLLQESEILMRELRQLAPQQIAELMHVSDKIALLNAERNAAWHTPFTPENAKQAVYMFNGDVYEGIDAESLNPAQIQYLQQHVRLLSGLYGLLRPLDLMQPYRLEMGTAFANSRGKNLYEFWGDRITDLLNETLAANGSEVLINLASQEYFKSVNTKKLKAKLITPVFKDEKNGQYKIISFYAKRARGLMVRYAAKHGITESQDLQNFDYEGYEFNAAASNDKEWVFLRKEQTK
>NZ_CP046027.1|WP_100562989.1|125613_126798_+|succinyldiaminopimelate-transaminase
MNSLLSQLKPYPFARLREAMQGLEAPEGVSIVPLHIGEPKHATPKVITDALTASLSELEKYPLTAGLPELHQACADWLARRYDGLAVDPATEILPVLGSREALFSFIQTVLDPVADSKPVVISPNPFYQIYEGGTILGGGEIHFANCPAPSFNPDWSSVSDDLWQRTKMVLVCSPNNPSGSVLQLEDWQELFALQDKYGFVIASDECYSEIYFDGKKPIGGLQAAAQLGRGFDKLVMFTSLSKRSNVPGLRSGFVAGDAALLKAFLLYRTYHGSAMSIPVQRASIAAWNDEAHVIDNRRLYQEKFDKVIPILREVFEVDFPDASFYIWLKVPDGDDLAFAKHLWTEAAIQVLPGRFLARDTEQGNPGEGYVRIALVADVETCVKAAETIVSLYR
>NZ_CP046027.1|WP_095501815.1|124132_125302_+|nitronate-monooxygenase
MSHSFDPLVIRGKSLIPIVQGGMGVGISASKLSSAVARENGIGTIASVDLRHLHEDLLAESTVNSTEEKYTKLNRIALDREIQKAKSGAEGNGMIAVNVMKAVKDHAAYVRQACESGADAIVMGAGLPLDLPEMTEGYHKDVALFPILSESRGINIVLKRWMKKGILPDAIVIEHPAHAAGHLGAATVAGVNDEKFEFKRVIEETLEVFKNLGLESEKIPLVLAGGMANFEKVTTALKTWGANAVQIGTAFAVTQEGDAHINFKKTLAGADTEQVVEFMSVAGLPARGVRTKFLDNYIKREAKLQSVAKADPRRCTQGLNCLTSCGLRDGLDKAGQFCIDIQLSAAFRGEVDKGLFFRGKDPLPFGNAMRTVQETIHYLLNGALPVAAK
>NZ_CP046027.1|WP_095501814.1|122659_123496_+|symmetrical-bis(5'-nucleosyl)-tetraphosphatase
MAHYAIGDIQGCYDELSVLLQKIDFNHGTDTLWLTGDIVNRGPKSLESLQFAMQHPDSVQIILGNHDFHLLAVGYGYGTTKRSDTITPILNHPDSRKMLDWLRHQPLMIRNDSHVMVHAGILPQWSVAQAEELAREAEAELQGSKYEKFFAKMYGNTPIAWDENLSGYSRLRFIVNVFSRMRALTYQNELDFDFKATLDKMPIYLRPWFRVPNRQNLSHKIVFGHWSSLGYMNTDGIISLDTGALWGGELTAINLDTEVVTQIPAINGLDWRTALKKD
>NZ_CP046027.1|WP_095501813.1|122156_122546_+|RidA-family-protein
MAKTIIHTDNAPAAIGAYSQAVRAGDTVYMSGQIPLDPATMQVVGDGDFRAEAVQVFKNLQAVAEAAGGSLSDIVKVNAYLTDLGNFAIFNEVMAEFIPEPFPARAAVGIASLPKGVQVEAEAVLVLNA
>NZ_CP046027.1|WP_100562991.1|120758_121979_+|oxygen-independent-coproporphyrinogen-III-oxidase-like-protein
MTPITFNQAGQLTALPPLSLYIHIPWCIKKCPYCDFNSHNISRYQPLATITPKQTAPSGLPEDAYVDALLADLQTELPNIWGRPVETIFFGGGTPSLFSAQAIDRLLSGVRSLVRLQPNAEITLEANPGTFEIEKFQGFKEAGITRLSIGVQSFNDEMLTRLGRVHNSREALTAIDTALNLFDKVNIDLMYALPNQTVQTALNDVRTAIATGASHISAYHLTMEPNTAFGHTPPQGLPSDENALDIEDAVHAALEHAGFIHYETSAFARAGMQCRHNLNYWQFGDYIGIGAGAHGKISYADRIERTTRRRHPNDYLTAMQSNPTDGIERKTIQRDDLAFEFMMNILRLTDGVPAAMLQQRTGISTAHIMPQIETARQKGLLEPDPTVLKPTAQGRLFLNDLLQCFL
>NZ_CP046027.1|WP_095501811.1|120107_120704_+|RdgB/HAM1-family-non-canonical-purine-NTP-pyrophosphatase
MFDKIVLASGNAGKLKEFSRLFAEHNIDILPQSQFDTPECPEPYFTFIENALTKARHAAKHSGLPALADDSGICANALGGAPGVLSARYAGADPKSDAANNAKLSADLADKADQSCYYVCVLVFVRHEHDPQPIIAEGIWRGQWQQQPSGSNGFGYDPHFYLPEHGCTAAELAPEVKNAVSHRGLALQELLKKIQAAI
>NZ_CP046027.1|WP_095501820.1|133517_134522_+|phage-major-capsid-protein,-P2-family
MHAHIQKYIAAVAKANGVANPAENFSVSPSVSQKMREKVRESSAFLKQINIVQKKDIAGEIIGIGAGLNASRTKTDPKGETVARKPKAVHTKTGREYRCEKVNFDTMITYEDMDNWSAHDNYIELVNRQIVKSKALSLIAIGFNGIKSADNSNAEENPLLQDIKKGWLQQLREGKAENVLGSSAEAVTVGATGKYKNLDAIVVDACNELIDDEFAEMPDMVVLCHRTLLGDKYFAVTNAAEQTATEQVAAHAITASKRLGGLTAIAVPYFPKNTMLITPLSNLSIYFHKTGHRRELINEPRFDRVSDYQSENIDYVVEEFGAAALIENIKIAEE
>NZ_CP046027.1|WP_095501821.1|134574_135234_+|terminase
MTSPARAHKQAILAAKSAEIDLTAAEPYQRLQYLLAQDRQMLKQIKGIPDKITAKRQAIEKYRDWLNQVYESGQANQDDVIFTTGLLWLVDIGELETAAPLIEFAIAQNMVAADEFKRDLKDRLFEEMAEQLANNDAAELSEQAASRLIEQITAINPDTGLHELNIMDQIRAKFLKACGERVEDAAPARALELYEKAVSYNANVGVKKRIEALKKQLAA
>NZ_CP046027.1|WP_095501822.1|135353_135839_+|head-completion/stabilization-protein
MSLVFADTDTQGRQSIGQNEIVSAVFWPRIDLSELRDVMRIDNNINSNRLYHTALESVAHVNGQLKGWRMAAQQRGFTALADVAEEDDKINGEAPQVAHYRRAVYCYTKALMLEKWADADATGKTGERAEAKQQQAEDYRREGHFAVAAIMGQRRCDAELI
>NZ_CP046027.1|WP_095501823.1|135850_136069_+|phage-tail-protein
MAKINTITTKEGDTVASLTAAFYGSSRHVVQVLQANPDLSLYPVLLPAGLKVVMPAIDTQAVPTLKTINLWD
>NZ_CP046027.1|WP_100562985.1|136073_136472_+|hypothetical-protein
MTDSQISTAINTALIIVGSYHLPASVAMGAIVGASLFILTREQHSIISKAWLFAVSFLSGIFGGNGAAEIVNWAIPSAIPLHLNEFTGAALFSALIVVVCTRLINLAETGRISFGRFGCKPEAAPSKEEANE
>NZ_CP046027.1|WP_100562983.1|136845_137328_+|lysozyme
MQTNPNQHKHIDDAGYQFIAKWEGKRNAAYLDSVRIPTIGIGFIRYTIGARAGRRVKLGDVLLDSEIQAEFTNQIKTYEDGVKAVVTVPLTQSQFNACVSLCYNIGVAAFARSTVVRRLNERKYQAACAAFALWNKAGGRVIKGLSNRRTAEQKEFFRHG
>NZ_CP046027.1|WP_154143186.1|137393_137708_+|hypothetical-protein
MKTKLTLYALAVALLFALAVSTIAQGRISAARADKIDTLQSQLAAAQAAEAQSRARAQALQAEVERLNQAAAAQAAAVSAAIARNPSWASQALPADVAAALNQP
>NZ_CP046027.1|WP_095501827.1|137719_137953_+|hypothetical-protein
MKEAFFILLMTVWLLVGCAKPAAPAPAHSCPPVPQCRAEVGEIHTHADLLQGFVAYKAAFNTCQAYRNALAACVGQQ
>NZ_CP046027.1|WP_095501828.1|137973_138198_+|TraR/DksA-family-transcriptional-regulator
MTDIFDQAAELEARQREYWLKKQREKTEYSASAYECEECGEPIPEARRQAVIGCRCCIECQEEIEQYGKTRRAP
>NZ_CP046027.1|WP_154212831.1|138172_138646_+|phage-tail-protein
MEKPAALREAIQAALPEFKTDPDRLRIYVDGGEIEPARGTLSHKTAYTLNLFAQEIAKDKLTRLNIAIIHWLQRNQPDILNPGTNGNKAYTFEAEPLTSDVWDVLIQLKLTENILVRMDDKGRLNIKTKAEPQYDLEDALGQYAAALGVPNDNQIGG

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Crispr_ID: NZ_CP046027_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046027_2

1640271-1641560

TypeI

Consensus_repeat	Method
TCAGCCACCTTCGGGTGGCTGTGTGTTGAAAC	CRISPRCasFinder
TCAGCCACCTTCGGGTGGCTGTGTGTTGAAAC	CRT
TCAGCCACCTTCGGGTGGCTGTGTGTTGAAAC	PILER-CR

19 spacers

cas2,cas1,cas4,cas7,cas8c,cas5,cas3

The CRISPR arrays of NZ_CP046027_2

>merge|NZ_CP046027|2|1640271-1641560|CRISPRCasFinder,CRT,PILER-CR
TCAGCCACCTTCGGGTGGCTGTGTGTTGAAACTTTAAATCCTCCTTTTTTGGCTAAATCGCGGAATCAGCCACCTTCGGGTGGCTGTGTGTTGAAACATAAAAACTGCTTTCAGGTGGCCTGGAACATGATTCAGCCACCTTCGGGTGGCTGTGTGTTGAAACAAATTGCCCGATAACGGCTTCGAGTGTATCGGCTCAGCCACCTTCGGGTGGCTGTGTGTTGAAACTGTGTCCAGCGGTTCGCCATCGTAGGCGTCGATGTCAGCCACCTTCGGGTGGCTGTGTGTTGAAACAAAAACGACTAGGCTTGTGGTATCCAGTCCGTAATCAGCCACCTTCGGGTGGCTGTGTGTTGAAACCACTCGGAAACAGGGATAAACGGCGCAATCGGGTTCAGCCACCTTCGGGTGGCTGTGTGTTGAAACGTTTGGGAACGCTAGACGAAGTTATCTGTATGGCATCAGCCACCTTCGGGTGGCTGTGTGTTGAAACGGGAAAGATGGCAAGTGGTATTCCCGTGCTGAATCAGCCACCTTCGGGTGGCTGTGTGTTGAAACATAATGTCCGCCAAAATCCACGACGAAAAGCCGCTCAGCCACCTTCGGGTGGCTGTGTGTTGAAACATTATTGATATTTACGATAACCCGCACGGCACCTCAGCCACCTTCGGGTGGCTGTGTGTTGAAACTTGGATGCGACCGCCGGTGATGATAACCGCCCTGCCGTCAGCCACCTTCGGGTGGCTGTGTGTTGAAACAGATACAGGGTGTTTTTAATGCGCTCTACGCGGCCTCAGCCACCTTCGGGTGGCTGTGTGTTGAAACGTCATTCAAATCTGAATCTTCGTCATTCAAATCTGTCAGCCACCTTCGGGTGGCTGTGTGTTGAAACGAACGCACATGCGCTAAAGCGGTATGTTCGTCTAAATCAGCCACCTTCGGGTGGCTGTGTGTTGAAACAAGAGCTGCTGGCGCAACGTAAGCAGAAGCATCGCTCAGCCACCTTCGGGTGGCTGTGTGTTGAAACATTCTGTCCAGAAATGCCGCCCTGCTTTCGGCTATCAGCCACCTTCGGGTGGCTGTGTGTTGAAACGAAGAGGAAAAAGTAACCAGACCGCCCAAAGGTGTCAGCCACCTTCGGGTGGCTGTGTGTTGAAACAAAATGAAACTCGAAGACGGCACCGAAGTAGACCCAGCCACCTTCGGGTGGCTGTGTGTTGAAACTTGTTTGAAAACGCAGTGGGTTAATCATTAAAGGTCAGCCACCTTCGGATAGCTGTGTATTGAAGT

>NZ_CP046027|2|2|1640271-1641560|CRISPRCasFinder
TCAGCCACCTTCGGGTGGCTGTGTGTTGAAAC	TTTAAATCCTCCTTTTTTGGCTAAATCGCGGAA
TCAGCCACCTTCGGGTGGCTGTGTGTTGAAAC	ATAAAAACTGCTTTCAGGTGGCCTGGAACATGAT
TCAGCCACCTTCGGGTGGCTGTGTGTTGAAAC	AAATTGCCCGATAACGGCTTCGAGTGTATCGGC
TCAGCCACCTTCGGGTGGCTGTGTGTTGAAAC	TGTGTCCAGCGGTTCGCCATCGTAGGCGTCGATG
TCAGCCACCTTCGGGTGGCTGTGTGTTGAAAC	AAAAACGACTAGGCTTGTGGTATCCAGTCCGTAA
TCAGCCACCTTCGGGTGGCTGTGTGTTGAAAC	CACTCGGAAACAGGGATAAACGGCGCAATCGGGT
TCAGCCACCTTCGGGTGGCTGTGTGTTGAAAC	GTTTGGGAACGCTAGACGAAGTTATCTGTATGGCA
TCAGCCACCTTCGGGTGGCTGTGTGTTGAAAC	GGGAAAGATGGCAAGTGGTATTCCCGTGCTGAA
TCAGCCACCTTCGGGTGGCTGTGTGTTGAAAC	ATAATGTCCGCCAAAATCCACGACGAAAAGCCGC
TCAGCCACCTTCGGGTGGCTGTGTGTTGAAAC	ATTATTGATATTTACGATAACCCGCACGGCACC
TCAGCCACCTTCGGGTGGCTGTGTGTTGAAAC	TTGGATGCGACCGCCGGTGATGATAACCGCCCTGCCG
TCAGCCACCTTCGGGTGGCTGTGTGTTGAAAC	AGATACAGGGTGTTTTTAATGCGCTCTACGCGGCC
TCAGCCACCTTCGGGTGGCTGTGTGTTGAAAC	GTCATTCAAATCTGAATCTTCGTCATTCAAATCTG
TCAGCCACCTTCGGGTGGCTGTGTGTTGAAAC	GAACGCACATGCGCTAAAGCGGTATGTTCGTCTAAA
TCAGCCACCTTCGGGTGGCTGTGTGTTGAAAC	AAGAGCTGCTGGCGCAACGTAAGCAGAAGCATCGC
TCAGCCACCTTCGGGTGGCTGTGTGTTGAAAC	ATTCTGTCCAGAAATGCCGCCCTGCTTTCGGCTA
TCAGCCACCTTCGGGTGGCTGTGTGTTGAAAC	GAAGAGGAAAAAGTAACCAGACCGCCCAAAGGTG
TCAGCCACCTTCGGGTGGCTGTGTGTTGAAAC	AAAATGAAACTCGAAGACGGCACCGAAGTAGAC
CCAGCCACCTTCGGGTGGCTGTGTGTTGAAAC	TTGTTTGAAAACGCAGTGGGTTAATCATTAAAGG
TCAGCCACCTTCGGATAGCTGTGTATTGAAGT

>NZ_CP046027|2|1|1640271-1641560|CRT
TCAGCCACCTTCGGGTGGCTGTGTGTTGAAAC	TTTAAATCCTCCTTTTTTGGCTAAATCGCGGAA
TCAGCCACCTTCGGGTGGCTGTGTGTTGAAAC	ATAAAAACTGCTTTCAGGTGGCCTGGAACATGAT
TCAGCCACCTTCGGGTGGCTGTGTGTTGAAAC	AAATTGCCCGATAACGGCTTCGAGTGTATCGGC
TCAGCCACCTTCGGGTGGCTGTGTGTTGAAAC	TGTGTCCAGCGGTTCGCCATCGTAGGCGTCGATG
TCAGCCACCTTCGGGTGGCTGTGTGTTGAAAC	AAAAACGACTAGGCTTGTGGTATCCAGTCCGTAA
TCAGCCACCTTCGGGTGGCTGTGTGTTGAAAC	CACTCGGAAACAGGGATAAACGGCGCAATCGGGT
TCAGCCACCTTCGGGTGGCTGTGTGTTGAAAC	GTTTGGGAACGCTAGACGAAGTTATCTGTATGGCA
TCAGCCACCTTCGGGTGGCTGTGTGTTGAAAC	GGGAAAGATGGCAAGTGGTATTCCCGTGCTGAA
TCAGCCACCTTCGGGTGGCTGTGTGTTGAAAC	ATAATGTCCGCCAAAATCCACGACGAAAAGCCGC
TCAGCCACCTTCGGGTGGCTGTGTGTTGAAAC	ATTATTGATATTTACGATAACCCGCACGGCACC
TCAGCCACCTTCGGGTGGCTGTGTGTTGAAAC	TTGGATGCGACCGCCGGTGATGATAACCGCCCTGCCG
TCAGCCACCTTCGGGTGGCTGTGTGTTGAAAC	AGATACAGGGTGTTTTTAATGCGCTCTACGCGGCC
TCAGCCACCTTCGGGTGGCTGTGTGTTGAAAC	GTCATTCAAATCTGAATCTTCGTCATTCAAATCTG
TCAGCCACCTTCGGGTGGCTGTGTGTTGAAAC	GAACGCACATGCGCTAAAGCGGTATGTTCGTCTAAA
TCAGCCACCTTCGGGTGGCTGTGTGTTGAAAC	AAGAGCTGCTGGCGCAACGTAAGCAGAAGCATCGC
TCAGCCACCTTCGGGTGGCTGTGTGTTGAAAC	ATTCTGTCCAGAAATGCCGCCCTGCTTTCGGCTA
TCAGCCACCTTCGGGTGGCTGTGTGTTGAAAC	GAAGAGGAAAAAGTAACCAGACCGCCCAAAGGTG
TCAGCCACCTTCGGGTGGCTGTGTGTTGAAAC	AAAATGAAACTCGAAGACGGCACCGAAGTAGAC
CCAGCCACCTTCGGGTGGCTGTGTGTTGAAAC	TTGTTTGAAAACGCAGTGGGTTAATCATTAAAGG
TCAGCCACCTTCGGATAGCTGTGTATTGAAGT

>NZ_CP046027|2|1|1640467-1641494|PILER-CR
TCAGCCACCTTCGGGTGGCTGTGTGTTGAAAC	TGTGTCCAGCGGTTCGCCATCGTAGGCGTCGATG
TCAGCCACCTTCGGGTGGCTGTGTGTTGAAAC	AAAAACGACTAGGCTTGTGGTATCCAGTCCGTAA
TCAGCCACCTTCGGGTGGCTGTGTGTTGAAAC	CACTCGGAAACAGGGATAAACGGCGCAATCGGGT
TCAGCCACCTTCGGGTGGCTGTGTGTTGAAAC	GTTTGGGAACGCTAGACGAAGTTATCTGTATGGCA
TCAGCCACCTTCGGGTGGCTGTGTGTTGAAAC	GGGAAAGATGGCAAGTGGTATTCCCGTGCTGAA
TCAGCCACCTTCGGGTGGCTGTGTGTTGAAAC	ATAATGTCCGCCAAAATCCACGACGAAAAGCCGC
TCAGCCACCTTCGGGTGGCTGTGTGTTGAAAC	ATTATTGATATTTACGATAACCCGCACGGCACC
TCAGCCACCTTCGGGTGGCTGTGTGTTGAAAC	TTGGATGCGACCGCCGGTGATGATAACCGCCCTGCCG
TCAGCCACCTTCGGGTGGCTGTGTGTTGAAAC	AGATACAGGGTGTTTTTAATGCGCTCTACGCGGCC
TCAGCCACCTTCGGGTGGCTGTGTGTTGAAAC	GTCATTCAAATCTGAATCTTCGTCATTCAAATCTG
TCAGCCACCTTCGGGTGGCTGTGTGTTGAAAC	GAACGCACATGCGCTAAAGCGGTATGTTCGTCTAAA
TCAGCCACCTTCGGGTGGCTGTGTGTTGAAAC	AAGAGCTGCTGGCGCAACGTAAGCAGAAGCATCGC
TCAGCCACCTTCGGGTGGCTGTGTGTTGAAAC	ATTCTGTCCAGAAATGCCGCCCTGCTTTCGGCTA
TCAGCCACCTTCGGGTGGCTGTGTGTTGAAAC	GAAGAGGAAAAAGTAACCAGACCGCCCAAAGGTG
TCAGCCACCTTCGGGTGGCTGTGTGTTGAAAC	AAAATGAAACTCGAAGACGGCACCGAAGTAGAC
CCAGCCACCTTCGGGTGGCTGTGTGTTGAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046027.1\|WP_100563187.1\|1638016_1638688_+\|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl\|CDD\|187768
NZ_CP046027.1\|WP_095502780.1\|1651785_1651992_+\|putative-selenoprotein	unknown	unknown	gnl\|CDD\|225434
NZ_CP046027.1\|WP_100563030.1\|1652320_1652569_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046027.1\|WP_100563026.1\|1645569_1647117_-\|glutamate--cysteine-ligase	unknown	unknown	gnl\|CDD\|235001
NZ_CP046027.1\|WP_100563032.1\|1652565_1652877_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046027.1\|WP_100563035.1\|1655267_1656686_-\|type-I-glutamate--ammonia-ligase	unknown	unknown	gnl\|CDD\|181884
NZ_CP046027.1\|WP_100563193.1\|1630115_1631633_+\|sodium/proline-symporter-PutP	unknown	unknown	gnl\|CDD\|273981
NZ_CP046027.1\|WP_100563183.1\|1639788_1640082_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP046027.1\|WP_100563028.1\|1647364_1648186_-\|CoA-ester-lyase	unknown	unknown	gnl\|CDD\|225184
NZ_CP046027.1\|WP_154212884.1\|1648393_1649407_-\|tRNA-dihydrouridine(20/20a)-synthase-DusA	unknown	unknown	gnl\|CDD\|236991
NZ_CP046027.1\|WP_095502779.1\|1649723_1651802_+\|carbon-starvation-protein-A	unknown	unknown	gnl\|CDD\|184976
NZ_CP046027.1\|WP_100563191.1\|1631802_1634283_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP046027.1\|WP_095502237.1\|1628230_1629643_+\|D-alanyl-D-alanine-carboxypeptidase/D-alanyl-D-alanine-endopeptidase	unknown	unknown	gnl\|CDD\|334815
NZ_CP046027.1\|WP_095502782.1\|1653065_1655000_-\|TonB-dependent-copper-receptor	unknown	unknown	gnl\|CDD\|273801
NZ_CP046027.1\|WP_100563185.1\|1638688_1639702_+\|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
NZ_CP046027.1\|WP_100563189.1\|1635049_1637155_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	pfam09709_cas8c_CAS-I-C	gnl\|CDD\|187887
NZ_CP046027.1\|WP_095503635.1\|1637176_1638016_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	cd09689_cas7_CAS-I-C	gnl\|CDD\|187820
NZ_CP046027.1\|WP_095502239.1\|1627021_1627891_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293810
NZ_CP046027.1\|WP_095503634.1\|1634297_1635053_+\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	gnl\|CDD\|187534
NZ_CP046027.1\|WP_100563037.1\|1657084_1657897_+\|shikimate-dehydrogenase	unknown	unknown	gnl\|CDD\|234703

Protein	Function_ID	Function_description	E-value
NZ_CP046027.1\|WP_100563187.1\|1638016_1638688_+\|CRISPR-associated-protein-Cas4	gnl\|CDD\|187768	cd09637, Cas4_I-A_I-B_I-C_I-D_II-B, CRISPR/Cas system-associated protein Cas4. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas4 is RecB-like nuclease with three-cysteine C-terminal cluster.	4.23067e-42
NZ_CP046027.1\|WP_095502780.1\|1651785_1651992_+\|putative-selenoprotein	gnl\|CDD\|225434	COG2879, COG2879, Uncharacterized small protein [Function unknown].	7.06882e-14
NZ_CP046027.1\|WP_100563026.1\|1645569_1647117_-\|glutamate--cysteine-ligase	gnl\|CDD\|235001	PRK02107, PRK02107, glutamate--cysteine ligase; Provisional.	1.69188e-176
NZ_CP046027.1\|WP_100563035.1\|1655267_1656686_-\|type-I-glutamate--ammonia-ligase	gnl\|CDD\|181884	PRK09469, glnA, glutamate--ammonia ligase.	0
NZ_CP046027.1\|WP_100563193.1\|1630115_1631633_+\|sodium/proline-symporter-PutP	gnl\|CDD\|273981	TIGR02121, Osmoregulated_proline_transporter, sodium/proline symporter. This family consists of the sodium/proline symporter (proline permease) from a number of Gram-negative and Gram-positive bacteria and from the archaeal genus Methanosarcina. Using the related pantothenate permease as an outgroup, candidate sequences from Bifidobacterium longum and several from archaea are found to be outside the clade defined by known proline permeases. These sequences, scoring between 570 and -40, define the range between trusted and noise cutoff scores. [Transport and binding proteins, Amino acids, peptides and amines].	0
NZ_CP046027.1\|WP_100563183.1\|1639788_1640082_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	4.2119e-31
NZ_CP046027.1\|WP_100563028.1\|1647364_1648186_-\|CoA-ester-lyase	gnl\|CDD\|225184	COG2301, CitE, Citrate lyase beta subunit [Carbohydrate transport and metabolism].	1.2513e-61
NZ_CP046027.1\|WP_154212884.1\|1648393_1649407_-\|tRNA-dihydrouridine(20/20a)-synthase-DusA	gnl\|CDD\|236991	PRK11815, PRK11815, tRNA dihydrouridine(20/20a) synthase DusA.	0
NZ_CP046027.1\|WP_095502779.1\|1649723_1651802_+\|carbon-starvation-protein-A	gnl\|CDD\|184976	PRK15015, PRK15015, carbon starvation protein CstA.	0
NZ_CP046027.1\|WP_100563191.1\|1631802_1634283_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	6.07698e-50
NZ_CP046027.1\|WP_095502237.1\|1628230_1629643_+\|D-alanyl-D-alanine-carboxypeptidase/D-alanyl-D-alanine-endopeptidase	gnl\|CDD\|334815	pfam02113, Peptidase_S13, D-Ala-D-Ala carboxypeptidase 3 (S13) family.	1.14568e-112
NZ_CP046027.1\|WP_095502782.1\|1653065_1655000_-\|TonB-dependent-copper-receptor	gnl\|CDD\|273801	TIGR01778, TonB-copper, TonB-dependent copper receptor. This model represents a family of proteobacterial TonB-dependent outer membrane receptor/transporters which bind and translocate copper ions. Two characterized members of this family exist, outer membrane protein C (OprC) from Pseudomonas aeruginosa and NosA from Pseudomonas stutzeri which is responsible for providing copper for the copper-containing N2O reducatse. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins].	8.9905e-178
NZ_CP046027.1\|WP_100563185.1\|1638688_1639702_+\|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	0
NZ_CP046027.1\|WP_100563189.1\|1635049_1637155_+\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|187887	cd09757, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Zn-finger domain containing protein, distant homologs of Cas8 proteins; signature gene for I-C subtype; also known as Csd1 family.	1.4338e-132
NZ_CP046027.1\|WP_095503635.1\|1637176_1638016_+\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|187820	cd09689, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas7 is a RAMP superfamily protein; Subunit of the Cascade complex; also known as Csd2 family.	2.07146e-111
NZ_CP046027.1\|WP_095502239.1\|1627021_1627891_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293810	cd07724, POD-like_MBL-fold, ETHE1 (PDO type I), persulfide dioxygenase A (PDOA, PDO type II) and related proteins; MBL-fold metallo-hydrolase domain. Persulfide dioxygenase (PDO, also known as sulfur dioxygenase, SDO, EC 1.13.11.18) is a non-heme iron-dependent oxygenase which catalyzes the oxidation of glutathione persulfide to glutathione and persulfite in the mitochondria. Mutations in ethe1 (the human PDO gene) are responsible for a rare autosomal recessive metabolic disorder called ethylmalonic encephalopathy. Arabidopsis thaliana ETHE1 is essential for embryo and endosperm development. Bacterial ETHE1-type PDOs are also called Type 1 PDOs. Type II PDOs (also called PDOAs), are mainly proteobacterial. These enzymes belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions.	6.75846e-71
NZ_CP046027.1\|WP_095503634.1\|1634297_1635053_+\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|187534	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex; in subtype I-C this protein might be the endoribonuclease that generates crRNAs; also known as DevS family.	3.4342e-90
NZ_CP046027.1\|WP_100563037.1\|1657084_1657897_+\|shikimate-dehydrogenase	gnl\|CDD\|234703	PRK00258, aroE, shikimate 5-dehydrogenase; Reviewed.	1.06321e-109

>NZ_CP046027.1|WP_100563183.1|1639788_1640082_+|CRISPR-associated-endonuclease-Cas2
MLMLITYDISLEDAQGQARLRRIAKHCQDYGVRVQFSVFECDIAPDQWVVLKDKLLKTYNPETDSLRFYHLGSKWRRKVEHHGAKPAVDIFQDTLII
>NZ_CP046027.1|WP_100563185.1|1638688_1639702_+|type-I-C-CRISPR-associated-endonuclease-Cas1
MKKLQNTLYITTQGSYLHKERETLVVEQERKKVAQLPIHSIGHIFCFGNVLVSPFLMGFCGENNVNLAFFTENGRFLGRLQGRQSGNVLLRRAQYRRSESDPVPIARNIIAAKIQSSKRVLQRQIRNHGENADIQTAITALNFSVQQLKLAHDLDVIRGIEGDAAARYFGVFQHLVNEKSGFVFNGRNRRPPRDEVNALLSFTYSILGKDISGALQGVGLDPQVGFLHADRPGRDSLAQDILEEFRAWWADRLVLSLINRGQIKPQDFTREAGGAVVLKAEARKLLFQTLQAKKQEKILHPFLQEEVAIGLLPHIQAMLLARHLRGDLAEYPPFLMR
>NZ_CP046027.1|WP_100563187.1|1638016_1638688_+|CRISPR-associated-protein-Cas4
MSIDLPSTTQIPAAGQNKKYDQRQIPLSALQHYAFCPRQCALIHNEQAWAENFLTAQGRALHERVDSGEPETRKGVRFERSVHVSAEKLGVSGIVDMVEHDLQSGHLKPVEYKRGKPKPTAMDEIQLCAQALCLEEMTGQSIDEGVLWYMQTRHRLPVILSDGLRKQTIETIGKVRQLLESGQTPQAEYGKHCQACSLLDICEPKLFGQDLSVKYTEALFGES
>NZ_CP046027.1|WP_095503635.1|1637176_1638016_+|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MSLTKKIDFALILKVTNANPNGDPLNGNRPRSDFAGIGEMTDVCLKRKIRDRLQSNGENIFVQSDEKKTDGMTSLANRAKDKDVGLGAEAFGKKANKDETAKAACAKWLDVRSFGQVFAFGKSDDGAGVSIAVRGPVTIQSAFSVEPVNITSTQITKSVSGEGDGTKKSSDTMGMKHRVDSGIYVAFGAMSPQLAERTGFSDEDADKIKAVLTKLFEGDASSARPEGSMQVLKLIWWEHNCKSGQYSSAKVHGSLTVNPDGSYQLENLEGLQPQEIEGF
>NZ_CP046027.1|WP_100563189.1|1635049_1637155_+|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MSWMQKLYRTYEFVQNQGLDDEELALPFHLSKAVHLKIVLNDKAELVRAERFEGKKQVPIQITEKSSKRSGSTIAAYALHDGLQYIAKTAKRYLTIEYLSKIAEKTNGKKWKEFLAGTDEEKQKFADAEKAKYQSCFEFYEKQLSDWAEFSHLQEINIVLRYIQKGSLIEDLIEKKYFSFEDNILLSVKDDPFGLTIVWAVEMPDDPHSDLWSKGNIKKQWIKYQENQSEQGNKNKALCYVTGEEDYPVEAYPKIDGNAKLVSANDDTGFTFRGRFYGDKDNGAKSELGSQAVTLGRDVSQKAFNILKWLIKRQGISNGDQKTVVWAISGKEVPSPMKDSFGVIDWDNLDTSAVESETEIDMSFEEKTSSKDWSSNVGKSAAEIIKKKLHGYKAELEEHEQISLLMVDKSTDGRMALTYYQEFLPADYFDNLDAWVDDFAWYQRRSIEKKNGKKTDKQTLWPVLPPSPFDIGHAVYGKALSDTLKKQLYARLLPVIAGGRQVPIPYDLVQKSFQTACNPYANHRPEDGEKIRHTNWQRNIGVACALYKGWRARHHDLSQRRTYLMSLDKENRSRDYLFGRLLAVAEKLESTALRIADENRSTNAERYMQRFAVRPLSTWLQIELGLEPYKNRLRSNRYIGFLRNREKEIDEIMSALNELKSPLDKPLDGEFLLGYHSQKMAYRNSSNTTSEQDEQDQTETH
>NZ_CP046027.1|WP_095503634.1|1634297_1635053_+|type-I-C-CRISPR-associated-protein-Cas5
MNNKNTFRSKPFCFRVWGRQALFTDPVTKIGGEKFSYQVPTYEALKGILKSIYWKPTLIWHIDRVRVMKPIHTQSKSTKPRQWESPKGAHHTLAIYTFLQDVEYQVEAHFTWNENWEELKGDRNEGKHTAIAERMLQRGGRQDIFLGTRDCQGYVEPCEFGSGKGFYDEIDNLDFGLMFHSFGYPEETGKHELISRFWNAGMQRGKIEFPSVNDVSGSLKTRFIRKMKPEKPFKRGENVKPVEDEAKELGL
>NZ_CP046027.1|WP_100563191.1|1631802_1634283_+|CRISPR-associated-helicase/endonuclease-Cas3
MKQAIAHVRAFDKAEQSVETHLIETAAIAQALAKKLELSEAGELLGLMHDFGKYSTAFQEYIRAVTGQDPDADNDYVLPNGQKIDHSTAGAQWVYRRLKKFGAQNGIGELVGQILGLCIASHHGEGLIDCLSMNGEAVWQKRFDKEDELTHLSECEQRADKAVKIRAEELAGENLVKSLLKPLAAIFKNPDSNDKIKEFYIGCLTRFLFSCLIDADRINSADFEREEQKDLRRLDQSPDWQQAIDKLEMHLANFEIRYPIDEVRSEISATCLKRANDPQGIYTLTVPTGGGKTLASLRYALHHAKQHKLDRIIYIIPYTSIIDQNAEAVRKVYCLNPKDNGDSCRVCSECQKWVLEHHSNLEPEQQNWQDKLLSENWDKPIVFTTMVQFLDAWFGGGTRGVRHVHAMTKSVLIFDEIQTLPVKCVHLFCNVLNWLTQFGKSSAVLCTATQPLLDKLHKSDLGALKLAENAEIMGRNKTLNQLFDDLSRVEIHYKPKAGGWPVGEAGAFLLEQFQTASSCLFIVNTKKWAQELYQYCQRQDVPPEALFHLSTNQCSVHRKAIFDEIKGRLKNKQPVICISTQLIEAGVDISMSCVIRALGGLDSIAQAAGRCNRHGEKAGKGQVYVLNLQEPNLARVLPDIDQGQRNAERVLREFAEQDILQPNAMRQYFEYYFYNRSSEMSYTVKGSTSGSLLDWLSDNRLNAYAAKNDKRRPKLPLLMQSFKSAGRAFQAIEAPTRAVIVPYGKGKDLIAELCGAWDPKEMYHTLAKAQRYSVNVFPNVWEKLEKEQAVQEVQAGLGIYYLKERYYSDEYGLSVDEVGAMTFYEL
>NZ_CP046027.1|WP_100563193.1|1630115_1631633_+|sodium/proline-symporter-PutP
MNPMYITFGLYLVAVLLIGLAAYFSTRNFDDYILGGRSLGPYVTAMSAGASDMSGWLLMGLPGAIYAVGLSEAWIAIGLTIGAWLNWLFVSGRLRVHTEYANNALTLPDYFFHRFGAKGQAMKVISAIIILFFFTIYCASGVVAGARLFQSLFEGMSYETAIWLGAGATIAYTFIGGFLAVSWTDTVQATLMLFALILTPVMVYLSLGGAEEMSAAVQAVAATTGQEYGSLFAGTTFLGIISTAAWGLGYFGQPHILARFMAAENVQSLKSARRIGMTWMIVCLSGAVAVGYFGIAYFGGHPEQVSAMEGNNERVFIALATLLFNPWIAGVILSAILAAVMSTLSCQLLVCSSAITEDFYKGFLRPEAEQKELVWVGRIMVLAVAVIAILIAGNPDSKVLGLVSYAWAGFGAAFGPVVILSVFWKRMTANGALWGMITGAVVVVLWAEFANPALKNAGMATMYEIVPGFIACWLVTYIVSLIGKEPSREVIEKFEKADADYRAAS
>NZ_CP046027.1|WP_095502237.1|1628230_1629643_+|D-alanyl-D-alanine-carboxypeptidase/D-alanyl-D-alanine-endopeptidase
MKLRESLTLFMLTAFSLPAMALNFGKIPADEISVYVQDLDTGKVQIDHRSGVSVNPASTMKLVTAFAAFQALGKDYRWTTHFKSAAPIVGDTLNGDIYWEGSGDPVLDQDGLIALQQQLRDRGIRNIAGQLVLDRSLWGDIRNSKEFAADEAETYMTPPDPNRLAYKVVAVKGERSPLGDIVWTTNPPLPNIKLDNQTTIVPSAAECKSISHYMSGRYSGGALIISGNVPETCLSETLYVNMLTSQDFARRSFINQWRAAGGTISDGLKVAATPSEAKTLASLQSKPLSEILADMNKFSNNLIARSVFLKLGQDKDLHEALHRADSAVKLELGMAGVDTTHLVLENGSGLSRKERVTAKMMGQLLEQAYFSRYKDEFINTLPIAGVDGTLKTRLKQAGDNLRLKTGTLKNVRALAGYWLGEQPKVVVVVINSPNSDAYLKDMDRLVSEIVLPGGKSWVALGNTCEVRQDV
>NZ_CP046027.1|WP_095502239.1|1627021_1627891_+|MBL-fold-metallo-hydrolase
MQIKSFLDPDTETFSHILTDEGSKLCAVIDPVLDFDPKAGRVSYNNADKLIDFVRQNQLQLEYIIETHAHADHLSAAPYLKRELGGRLVIGKHIEKVQKVFKPLFNLGDDFKTDARQFDILTEEGSELCLGSLRIKAIHVPGHTPADMAYLVSDGLKTAMFVGDTLFAPDVGTARCDFPKGSSSDLYDSIQRLLALPDETELYLCHDYPPEERTTHIAKITVGEQKRSNIHVKQGTDKAAFVKMRDERDATLAMPRLILPSVQTNINAGQLPQPEDNGVRYLKIPLNQL
>NZ_CP046027.1|WP_100563026.1|1645569_1647117_-|glutamate--cysteine-ligase
MNIETLPLSGGNIGIERESLRTTADGHLAGTRHPEALGNVYTHPNITIDYGEALLELVTDPHQSPKAVYQQLLELHQFSAQNIGEERMWAASMPCRLPDNPEHIEIGYFGQSNGAKLKRLYRVGLSYRYGRTMQMIAGVHFNYSPPESLWAALAKQEGVEPTDDWRNECYMGMIRNIQHHGWLICHLFGTAPACDQSFQPAQNVLDRLHEQSFSWKNATTLRMSQLGYQNKVDFSVSFNHLNEYVRDLGAAVLTPAPVYEYLGLRGPAGLYRQISTNILQIANEYYSGARPKQVMKKGELPISALSARGIAYVELRLLDNNPYDPAGISLEQIHFLESFMLWCLLKDSPAFTTADYNEANHNRLRTACSGLSEGFSLFKNGRSISAQDWANEILHEILPIAERLDQGSDNSGYREAVQSQIRANSGETLRLPQRVQAEMAEQEFLPWAMALTAQHSETLKQPLPQDVQAKLEAQSQQSLQEFAEIEAKAADEIPFDDYLANYFNPLHECLAKLTV
>NZ_CP046027.1|WP_100563028.1|1647364_1648186_-|CoA-ester-lyase
MLNRPIPKVFLFVPATRPERIAKAFASGADEVIVDWEDTVSPEDKATARANIAEYCHQAGQPAVWVRINNSRSAFYADDVAALKTMPEIKGILLSKTVHADEISSLHHATGKPVIADIESAQGMADIGKLARSDGLFALTYGCLDLANNLGVSYGTTAAQTVFDRLRTDMLLHSRINNLHPPIETTFPDFNDHEANRQNAEYWHDMGFGGVLCIHPKQVAAVKEALRPSEDLLAFARKVVAEAEHSGQAVFQVDGQMIDAPVIERAKWVLRQS
>NZ_CP046027.1|WP_154212884.1|1648393_1649407_-|tRNA-dihydrouridine(20/20a)-synthase-DusA
MTTNILPTRRLSVAPMLDWTDRHYRHMARQITQNTWLYSEMINSGAIVYGDKNRFLMFNEGENPVALQLGGSDPAELAKAAKAVEEYGYDEVNLNCGCPSPRVQKGAFGACLMNEVDLVADCLNTMQDAVQIPVTVKHRIGVDRQTEYQTVADFVGTLRDKTACKTFIIHARNAWLDGLSPKENRDIPPLKYDYVYRLKQEFPKLEILINGGITTNEQIAEHLQHVDGVMVGREAYHNPMVMREWDQLFYGSSHAPIEYADLVQRLFAYSQAQIQSGRGTILRHIVRHSLGLMHGLKGARTWRRMLSDALLLKDNDGTLILEAWREVEKANRFGLGE
>NZ_CP046027.1|WP_095502779.1|1649723_1651802_+|carbon-starvation-protein-A
MKALKSFLIWGLVVLAGVFAFATLALSRGEHVSAIWLVVAAVSVYCIAYRFYSLYICKNILQLDHRRMTPAERNNNGVDYVPTDKKVLFGHHFAAIAGAGPLVGPVLASQMGYLPGTLWIIFGVVLAGAVQDMMVLFVSMRRDGKSLGDIIKQELGTTAGVIASIGILMIMIIITSVLALIVVKALTHSPWGTFTIAVTVPIALFMGFYARFIRPGHLGEIAIVGFIAMMSAVIFGNHVAESAIGPWFDLNGVQLAFGIMLYGGISSLLPVWFLMTPRDYLATFLKIGTIIALAIGIIVVGPVLKMPAVTHFIDGTGPVFSGKLFPFLFITIACGAVSGFHALISSGTTPKMIENETHVRAIGYGGMLMESFVAIMALAAACVLEPGVYFAMNSPAALIGTDPATAAHAITTHLQIPVDAATLANTAREVGENSILSRAGGAPTLAVGMAHIMSQLIPGEAMMAFWYHFALLFEAMFILTAVDAGTRTSRFMVQDLLGIFVKPLGTGQGMFSNLVATFLTVGAWGYFLYTGVTDPLGGINSLWPLFGIGNQMLAGMALIMVAVVLVKMKKERYVWVPLVPAMGLLIVTAVASMQKLFDSDPRVSFLAHAAQYREAAARGEVLAPAKDVAQMGQIVFNDYVNSGLCAAFMLVVIFIAIYGLMTAMKARKVAWPTAKEVPAVYRDEVQTNEKIA
>NZ_CP046027.1|WP_095502780.1|1651785_1651992_+|putative-selenoprotein
MRKLLNHPLIGRLKKAHKSFCVAANYMAGIPDYDRYVAQQRKYNPNTPVMTRAQFIEYCRIKSGGGCC
>NZ_CP046027.1|WP_100563030.1|1652320_1652569_-|hypothetical-protein
MIPLSDKLLGAAICLFLLLLAFYLGKTFLKQLRQSSRPWPVAYGYTILAFVLLVASKFIDRLNAQLDELFNITLSERSAVII
>NZ_CP046027.1|WP_100563032.1|1652565_1652877_-|hypothetical-protein
MNLSRHFLISTLLLTVYWALVLHVAVFAPLDLANFLFSESGTFEIFSPYLWFLLAIVCLCTRFTVLTRLATAATAVLFGLREMDLHKSLFSMSFLKTISIAAM
>NZ_CP046027.1|WP_095502782.1|1653065_1655000_-|TonB-dependent-copper-receptor
MKPSPFLSLLPLSFSISTTWGSTELPPLHQELEPVVVTAAPQNRANIVQFNTKRAVQPLPANDGAGLLLSVPNMNVIRKGGTSGDPLFRGLGGSRLAIQADDQFIYGGCGGRMDPPTAYIFPNSYDQVVITKGPQTVTQGTGLVAGSARFVRKEPKFHEKNIHFNTAYTIGSFGRHDAMVDGTVGNELGYARLNATYNTSDDYQDGDNNKAHSNFERNSQMLQLGLTPSPDTLLAATYERSRAKAAYSDRMMDGSKFDRDAWNVRGVQHNINDWFAEAEFRYGQSTIDHVMDNYSMRPVRPGMARANNPKRETDTAQLKTTFDFNNIELQTGIDYMRDKHSSRSGTDYASKPYTPNQNFTHWGGFAEANWAYTDHQNWIAGYRHDEIKAIYDAYPLNDTARTQKYNLNSGFLRYEHQAGNTKYYLGLGTAERAPDYWERNRSEDLLPERNNQIDTGVIWQNDKWRASVSLFGSRINNFILVDNSVGARNIRAERFGGEAEFNYRFAPNWTIGSSLAYTYGKNRTDNIPLAQTPPLDWKTSLNWDNGKFNAGALWRVVNKQKRFAKGQGNIIGQDIGASAGFGVLSLNAGWKINKNAILQAGVDNVFNKTYAEFVNKAGNASAGVQTTRVNEPGRQFWLRGQMQF
>NZ_CP046027.1|WP_100563035.1|1655267_1656686_-|type-I-glutamate--ammonia-ligase
MSIKDVVKLIEESEARFVDLRFTDTKGKQHHFTIPSRIVLEDPEDWFENGQAFDGSSMGGWKGVQASDMQLRPDASTAFIDPFYDDTTVVITCDVIDPADGQGYDRDPRSIAKRAEAYLKSSGIGDTAFFGPEPEFFVFDGVAFETAMHKTRYEITSESGAWSSGAHLDGQNTGHRPMVKGGYAPVAPVDQGQDLRSAMVNILEEIGIEVEVHHGEVGTGSQMELGTKFGTLVRRADQTQDMKYVIWNVAHNFGKTATFMPKPIMGDNGSGMHVHQSIWKDGQNLFAGDGYAGLSDTALYYIGGIIKHAKALNAICNPSTNSYKRLVPHFEAPVKLAYSAKNRSASIRIPSVNSVKARRIEARFPDPMANPYLCFAALLMAGLDGIQNKIHPGDPATKNLYDLPPEEDALVPTVCASLDEALAALKEDHEFLTRGGVFSKDWIESYIAFKEEDVRRVRMAPHPLEFEMYYSL
>NZ_CP046027.1|WP_100563037.1|1657084_1657897_+|shikimate-dehydrogenase
MSSKPRYAVFGNPVQHSKSPQIHQEFAKQENVAIDYDRIYAEIGGFAEAAAAFFAEGGQGANVTVPFKLDAFNFVDEHSERALAAGAVNTIIPLGNGKFRGDNSDGVGMVNDIIQAQGVPVTGKRVLLIGAGGAVRGVIPVLQGRQPAEIVIINRTHAKAEEVAERFGIRAIAMNELPENHFDIIINGTSGGLSGELPDIAPAVFGACALAYDMVYGKDSEPFLKFAAESGAQKTADGLGMLVGQAAFSYQLWRGFEPDIKPVFEYMKDL

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP046027_2	2.14\|1641163\|36\|NZ_CP046027\|CRISPRCasFinder,CRT,PILER-CR	1641163-1641198	36	NZ_CP046027.1	1588772-1588807	0	1.0

1. spacer 2.14|1641163|36|NZ_CP046027|CRISPRCasFinder,CRT,PILER-CR matches to position: 1588772-1588807, mismatch: 0, identity: 1.0

gaacgcacatgcgctaaagcggtatgttcgtctaaa	CRISPR spacer
gaacgcacatgcgctaaagcggtatgttcgtctaaa	Protospacer
************************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP046027_2	2.16\|1641298\|34\|NZ_CP046027\|CRISPRCasFinder,CRT,PILER-CR	1641298-1641331	34	NZ_CP015988	Sphingobium sp. EP60837 plasmid pEP1, complete sequence	71455-71488	5	0.853
NZ_CP046027_2	2.19\|1641495\|34\|NZ_CP046027\|CRISPRCasFinder,CRT	1641495-1641528	34	MN693385	Marine virus AFVG_25M376, complete genome	31201-31234	7	0.794
NZ_CP046027_2	2.19\|1641495\|34\|NZ_CP046027\|CRISPRCasFinder,CRT	1641495-1641528	34	MN693400	Marine virus AFVG_25M353, complete genome	31359-31392	7	0.794
NZ_CP046027_2	2.6\|1640631\|34\|NZ_CP046027\|CRISPRCasFinder,CRT,PILER-CR	1640631-1640664	34	NZ_CP020932	Marinobacter salarius strain SMR5 plasmid pSMR5, complete sequence	65230-65263	9	0.735
NZ_CP046027_2	2.3\|1640434\|33\|NZ_CP046027\|CRISPRCasFinder,CRT	1640434-1640466	33	NZ_CP018229	Rhizobium leguminosarum strain Vaf-108 plasmid unnamed1, complete sequence	611554-611586	10	0.697
NZ_CP046027_2	2.13\|1641096\|35\|NZ_CP046027\|CRISPRCasFinder,CRT,PILER-CR	1641096-1641130	35	MK496784	Capybara microvirus Cap3_SP_414, complete genome	2054-2088	11	0.686

1. spacer 2.16|1641298|34|NZ_CP046027|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015988 (Sphingobium sp. EP60837 plasmid pEP1, complete sequence) position: , mismatch: 5, identity: 0.853

attctgtccagaaatgccgccctgct-ttcggcta	CRISPR spacer
atcctttccagaaatgccgccctggtgttcggcc-	Protospacer
**.** ****************** * ******.

2. spacer 2.19|1641495|34|NZ_CP046027|CRISPRCasFinder,CRT matches to MN693385 (Marine virus AFVG_25M376, complete genome) position: , mismatch: 7, identity: 0.794

---ttgtttgaaaacgcagtgggttaatcattaaagg	CRISPR spacer
tattcgtt---aaacgcagtagggtaatcattaaacg	Protospacer
   *.***   *********.** *********** *

3. spacer 2.19|1641495|34|NZ_CP046027|CRISPRCasFinder,CRT matches to MN693400 (Marine virus AFVG_25M353, complete genome) position: , mismatch: 7, identity: 0.794

---ttgtttgaaaacgcagtgggttaatcattaaagg	CRISPR spacer
tattcgtt---aaacgcagtagggtaatcattaaacg	Protospacer
   *.***   *********.** *********** *

4. spacer 2.6|1640631|34|NZ_CP046027|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020932 (Marinobacter salarius strain SMR5 plasmid pSMR5, complete sequence) position: , mismatch: 9, identity: 0.735

cactcggaaacagggataaacggcgcaatcgggt	CRISPR spacer
ccatcggaaacagggagaaccggcgcatcacgat	Protospacer
*  ************* ** ******* .  *.*

5. spacer 2.3|1640434|33|NZ_CP046027|CRISPRCasFinder,CRT matches to NZ_CP018229 (Rhizobium leguminosarum strain Vaf-108 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.697

aaattgcccgataacggcttcgagtgtatcggc	CRISPR spacer
acggctgccgagaacggcttcgagagtatcgcg	Protospacer
* . .  **** ************ ******

6. spacer 2.13|1641096|35|NZ_CP046027|CRISPRCasFinder,CRT,PILER-CR matches to MK496784 (Capybara microvirus Cap3_SP_414, complete genome) position: , mismatch: 11, identity: 0.686

gtcattcaaatctgaatcttcgtcattcaaatctg	CRISPR spacer
caggcttaaatctgaatcttcttcatttaaattcc	Protospacer
   ..*.************** *****.****..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

185359 : 235625

Synechococcus_phage(23.08%)

transposase,protease

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_154212838.1\|185359_185578_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	6.4e-11	52.1
WP_154212839.1\|185626_186253_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	5.9e-33	45.6
WP_154212828.1\|186366_187326_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	1.1e-30	31.1
WP_095503326.1\|187436_188033_-	hypothetical protein	NA	NA	NA	NA
WP_095503327.1\|188179_188365_-	hypothetical protein	NA	NA	NA	NA
WP_095503328.1\|188605_188959_+	hypothetical protein	NA	NA	NA	NA
WP_095503329.1\|189148_189448_+	hypothetical protein	NA	NA	NA	NA
WP_095503330.1\|189512_189866_+	hypothetical protein	NA	NA	NA	NA
WP_100563444.1\|189894_190344_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_100563442.1\|190492_191956_+	mechanosensitive ion channel	NA	NA	NA	NA
WP_095503333.1\|191952_192408_+	dihydroneopterin triphosphate diphosphatase	NA	NA	NA	NA
WP_095503334.1\|192636_193332_-	phosphate signaling complex protein PhoU	NA	NA	NA	NA
WP_095503335.1\|193525_194059_+	inorganic diphosphatase	A0A2H4J8U1	uncultured_Caudovirales_phage	7.0e-19	35.1
WP_095503337.1\|194572_195733_+	phosphoethanolamine transferase	NA	NA	NA	NA
WP_100563440.1\|195770_196706_-	prolyl aminopeptidase	NA	NA	NA	NA
WP_095503339.1\|196841_197297_+	acyl-CoA thioester hydrolase YciA	NA	NA	NA	NA
WP_100563438.1\|197299_197656_+	MmcQ protein	NA	NA	NA	NA
WP_100563436.1\|197878_199294_-	PhoH family protein	A0A2I7SAD7	Vibrio_phage	1.4e-74	37.7
WP_095503341.1\|199478_201002_-	fumarate hydratase	NA	NA	NA	NA
WP_100563434.1\|202465_204088_+	FAD-binding protein	M1HTN0	Paramecium_bursaria_Chlorella_virus	7.1e-30	30.0
WP_095502161.1\|204084_205341_+	NADH-quinone oxidoreductase subunit F	NA	NA	NA	NA
WP_100563446.1\|207353_208760_+	Trk system potassium transporter TrkA	NA	NA	NA	NA
WP_095502160.1\|208881_209589_+	DUF541 domain-containing protein	NA	NA	NA	NA
WP_100563432.1\|209684_210455_-	M48 family metallopeptidase	NA	NA	NA	NA
WP_095503744.1\|210588_211530_-	hypothetical protein	NA	NA	NA	NA
WP_095503745.1\|211802_213098_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	1.9e-126	54.6
WP_100563430.1\|213349_215935_+	bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase	NA	NA	NA	NA
WP_100563428.1\|216115_217156_-	zinc-dependent alcohol dehydrogenase family protein	E3SJ82	Synechococcus_phage	1.0e-13	23.2
WP_095503748.1\|217340_218390_+	A/G-specific adenine glycosylase	G3CB03	Aeropyrum_pernix_spindle-shaped_virus	4.2e-31	35.0
WP_095503749.1\|218456_220436_-	transketolase	NA	NA	NA	NA
WP_100563426.1\|220582_221884_-	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_095503751.1\|222087_223623_+	cytochrome c oxidase accessory protein CcoG	NA	NA	NA	NA
WP_095503752.1\|223624_224176_+	hypothetical protein	NA	NA	NA	NA
WP_095503753.1\|224278_224821_+	DUF2062 domain-containing protein	NA	NA	NA	NA
WP_095503754.1\|224813_225350_+	type IV secretion protein Rhs	NA	NA	NA	NA
WP_095503755.1\|225479_226052_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
WP_095502845.1\|227932_229807_-	phosphomethylpyrimidine synthase ThiC	NA	NA	NA	NA
WP_100564573.1\|230127_231132_-	ADP-glyceromanno-heptose 6-epimerase	E3SL51	Synechococcus_phage	6.0e-27	34.5
WP_100564571.1\|231200_232163_-	D-glycero-beta-D-manno-heptose-7-phosphate kinase	M4QF80	Synechococcus_phage	1.3e-15	27.7
WP_100564569.1\|232288_233026_-	orotidine-5'-phosphate decarboxylase	NA	NA	NA	NA
WP_095502849.1\|233173_233821_-	adenylate kinase	NA	NA	NA	NA
WP_095503171.1\|234021_234438_-\|transposase	IS200/IS605 family transposase	A0A1S5RHE3	Helicobacter_phage	9.3e-51	66.4
WP_095503172.1\|234482_235625_+\|transposase	transposase	A0A1B0VCD8	Salmonella_phage	1.6e-121	57.3

DBSCAN-SWA_2

309971 : 375274

Tupanvirus(25.0%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_095502654.1\|309971_312335_-\|tRNA	phenylalanine--tRNA ligase subunit beta	A0A1L3IZU3	BeAn_58058_virus	6.1e-06	28.3
WP_100564151.1\|312447_313437_-\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2I2L4E3	Orpheovirus	4.3e-30	35.2
WP_100564154.1\|313739_314099_-	50S ribosomal protein L20	NA	NA	NA	NA
WP_095502651.1\|314111_314309_-	50S ribosomal protein L35	NA	NA	NA	NA
WP_095502681.1\|314455_314977_-	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	4.3e-13	33.3
WP_095502650.1\|315045_316953_-\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	3.7e-126	37.0
WP_095502649.1\|317242_317890_+	alpha-ketoglutarate-dependent dioxygenase AlkB	A0A2K9L4C1	Tupanvirus	1.0e-24	41.4
WP_100564156.1\|317939_319055_+\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	7.9e-89	47.6
WP_100564158.1\|319458_320472_+	ferrochelatase	NA	NA	NA	NA
WP_095503842.1\|321447_322125_+\|transposase	IS1595-like element ISNme3 family transposase	NA	NA	NA	NA
WP_100564159.1\|322146_323526_-	Na+/H+ antiporter NhaC	NA	NA	NA	NA
WP_100564161.1\|323696_324911_-	sugar MFS transporter	NA	NA	NA	NA
WP_095503545.1\|325126_325546_+	DedA family protein	NA	NA	NA	NA
WP_100564179.1\|325603_326797_-	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA
WP_154212841.1\|327047_328526_-	hypothetical protein	NA	NA	NA	NA
WP_095503543.1\|328600_329248_-	HAD-IIIA family hydrolase	NA	NA	NA	NA
WP_100564167.1\|329373_330201_-	ferritin-like domain-containing protein	NA	NA	NA	NA
WP_095503541.1\|330504_331125_+	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA
WP_095503540.1\|331202_332300_-\|tRNA	tRNA (uridine(54)-C5)-methyltransferase TrmA	NA	NA	NA	NA
WP_095503539.1\|332599_334132_-	phosphate acetyltransferase	NA	NA	NA	NA
WP_095503538.1\|334356_335433_-	peptide chain release factor 1	NA	NA	NA	NA
WP_095503537.1\|335515_336061_-	hypothetical protein	NA	NA	NA	NA
WP_100564169.1\|336112_336910_-	TatD family hydrolase	NA	NA	NA	NA
WP_100564171.1\|336950_337949_-	asparaginase	NA	NA	NA	NA
WP_100564173.1\|338161_338461_-	hypothetical protein	NA	NA	NA	NA
WP_095503533.1\|338623_339313_-	DedA family protein	NA	NA	NA	NA
WP_100564175.1\|339537_340878_-	phosphoglucosamine mutase	NA	NA	NA	NA
WP_100564177.1\|341030_341876_-	dihydropteroate synthase	A0A0B5J4J5	Pandoravirus	4.1e-21	31.8
WP_095503530.1\|342051_343245_+	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA
WP_095503529.1\|343684_344527_+	cytochrome c5 family protein	NA	NA	NA	NA
WP_095503842.1\|344602_345280_-\|transposase	IS1595-like element ISNme3 family transposase	NA	NA	NA	NA
WP_100564254.1\|345441_346314_-	chorismate mutase	NA	NA	NA	NA
WP_100564253.1\|346464_348585_+	AsmA family protein	NA	NA	NA	NA
WP_100564260.1\|348870_349368_+	disulfide bond formation protein B	NA	NA	NA	NA
WP_095502841.1\|349471_350197_-	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_095502842.1\|350610_352038_+	sodium:alanine symporter family protein	NA	NA	NA	NA
WP_095502843.1\|352103_352730_-	hemolysin III family protein	NA	NA	NA	NA
WP_100564258.1\|353216_354563_-	deoxyguanosinetriphosphate triphosphohydrolase	NA	NA	NA	NA
WP_095503031.1\|354662_355925_-	transcription termination factor Rho	NA	NA	NA	NA
WP_100564251.1\|356117_357809_-\|tRNA	glutamine--tRNA ligase/YqeY domain fusion protein	A0A222YZ70	Escherichia_phage	3.9e-196	59.7
WP_100564249.1\|357924_358542_-	glutathione S-transferase	NA	NA	NA	NA
WP_095503034.1\|358551_359331_-	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA
WP_100564256.1\|359410_360313_-	lysine exporter LysO family protein	NA	NA	NA	NA
WP_100564247.1\|360369_361116_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_154212842.1\|361108_361339_-	hypothetical protein	NA	NA	NA	NA
WP_095503036.1\|361532_361949_-	OsmC family protein	NA	NA	NA	NA
WP_095503037.1\|362227_363034_-	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA
WP_095503038.1\|363120_363918_-	hydroxyethylthiazole kinase	NA	NA	NA	NA
WP_095503842.1\|364317_364995_-\|transposase	IS1595-like element ISNme3 family transposase	NA	NA	NA	NA
WP_100564577.1\|365614_367063_+	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_095502166.1\|367308_368229_+	c-type cytochrome	NA	NA	NA	NA
WP_100564575.1\|368476_370075_+	peptide chain release factor 3	A0A2K9L6L3	Tupanvirus	5.4e-14	36.0
WP_095502168.1\|370140_370908_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
WP_154212926.1\|371041_371974_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_100564638.1\|372343_372913_+	TIGR00645 family protein	K4K6D8	Caulobacter_phage	6.8e-20	32.7
WP_100564636.1\|372961_373477_-	hypothetical protein	NA	NA	NA	NA
WP_095503171.1\|373670_374087_-\|transposase	IS200/IS605 family transposase	A0A1S5RHE3	Helicobacter_phage	9.3e-51	66.4
WP_095503172.1\|374131_375274_+\|transposase	transposase	A0A1B0VCD8	Salmonella_phage	1.6e-121	57.3

DBSCAN-SWA_3

388686 : 442589

Staphylococcus_phage(50.0%)

transposase,integrase

attL 383143:383188|attR 407076:407121

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
383143:383188	attL	NA	NA	NA	NA
WP_154212846.1\|388686_389646_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	5.9e-32	31.4
WP_095503325.1\|389953_390217_+	type II toxin-antitoxin system prevent-host-death family antitoxin	NA	NA	NA	NA
WP_095503318.1\|390213_390477_+	Txe/YoeB family addiction module toxin	NA	NA	NA	NA
WP_095503317.1\|390516_390894_-	hypothetical protein	NA	NA	NA	NA
WP_100564589.1\|391560_391959_+	phosphoglycerate kinase	NA	NA	NA	NA
WP_095503324.1\|392025_392358_+	molybdenum ABC transporter ATP-binding protein	NA	NA	NA	NA
WP_095503315.1\|392359_392716_+	hypothetical protein	NA	NA	NA	NA
WP_095503314.1\|392766_393210_+	hypothetical protein	NA	NA	NA	NA
WP_095503313.1\|393199_393553_+	hypothetical protein	NA	NA	NA	NA
WP_100564587.1\|393881_394694_+	ShlB/FhaC/HecB family hemolysin secretion/activation protein	NA	NA	NA	NA
WP_095503171.1\|394763_395180_-\|transposase	IS200/IS605 family transposase	A0A1S5RHE3	Helicobacter_phage	9.3e-51	66.4
WP_095503172.1\|395224_396367_+\|transposase	transposase	A0A1B0VCD8	Salmonella_phage	1.6e-121	57.3
WP_100564516.1\|397564_403342_+	filamentous hemagglutinin N-terminal domain-containing protein	A0A0R6PJK4	Moraxella_phage	1.6e-71	24.8
WP_095503323.1\|403601_403823_+	hypothetical protein	NA	NA	NA	NA
WP_154212847.1\|405544_406351_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_095501851.1\|407254_408217_-	calcium/sodium antiporter	NA	NA	NA	NA
407076:407121	attR	NA	NA	NA	NA
WP_095501850.1\|408534_409872_+	sodium-dependent transporter	NA	NA	NA	NA
WP_095501849.1\|410071_411079_-	FAD:protein FMN transferase	NA	NA	NA	NA
WP_095501848.1\|411240_411738_-	copper-binding protein	NA	NA	NA	NA
WP_095501847.1\|411734_412565_-	ABC transporter permease	NA	NA	NA	NA
WP_095501846.1\|412561_413452_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.1e-24	31.5
WP_095501845.1\|413512_414862_-	nitrous oxide reductase family maturation protein NosD	NA	NA	NA	NA
WP_100564387.1\|415015_416983_-	TAT-dependent nitrous-oxide reductase	NA	NA	NA	NA
WP_100564391.1\|417057_419319_-	regulatory protein NosR	NA	NA	NA	NA
WP_154212848.1\|419714_420674_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	1.3e-31	31.4
WP_100564223.1\|420860_421874_-	ketol-acid reductoisomerase	NA	NA	NA	NA
WP_095502014.1\|421921_422215_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_095502013.1\|422284_422776_-	acetolactate synthase small subunit	NA	NA	NA	NA
WP_100564226.1\|422772_424557_-	biosynthetic-type acetolactate synthase large subunit	G8DDL3	Micromonas_pusilla_virus	6.0e-54	29.5
WP_100564240.1\|424956_425979_-	family 20 glycosylhydrolase	NA	NA	NA	NA
WP_095502011.1\|426629_427304_+	SCO family protein	NA	NA	NA	NA
WP_100564228.1\|427378_428035_+	ATP phosphoribosyltransferase	NA	NA	NA	NA
WP_100564230.1\|428109_429402_+	histidinol dehydrogenase	NA	NA	NA	NA
WP_095502008.1\|429647_430487_-	aldo/keto reductase	NA	NA	NA	NA
WP_100564232.1\|430978_432322_+	Na(+)-translocating NADH-quinone reductase subunit A	NA	NA	NA	NA
WP_100564234.1\|432324_433557_+	NADH:ubiquinone reductase (Na(+)-transporting) subunit B	NA	NA	NA	NA
WP_100564236.1\|433549_434320_+	Na(+)-translocating NADH-quinone reductase subunit C	NA	NA	NA	NA
WP_095502004.1\|434319_434946_+	NADH:ubiquinone reductase (Na(+)-transporting) subunit D	NA	NA	NA	NA
WP_095502003.1\|434949_435543_+	NADH:ubiquinone reductase (Na(+)-transporting) subunit E	NA	NA	NA	NA
WP_095502002.1\|435555_436773_+	NADH:ubiquinone reductase (Na(+)-transporting) subunit F	NA	NA	NA	NA
WP_095502001.1\|436865_437327_-	DMT family transporter	NA	NA	NA	NA
WP_095501999.1\|437605_438646_+	FAD:protein FMN transferase	NA	NA	NA	NA
WP_095501998.1\|438667_438892_+	(Na+)-NQR maturation NqrM	NA	NA	NA	NA
WP_100564238.1\|438967_440050_-	prephenate dehydratase	NA	NA	NA	NA
WP_100564239.1\|440209_441445_-	multidrug effflux MFS transporter	NA	NA	NA	NA
WP_154143172.1\|441629_442589_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	1.0e-31	31.4

DBSCAN-SWA_4

567347 : 635405

Staphylococcus_phage(27.27%)

transposase,integrase,tRNA

attL 567188:567247|attR 634103:635955

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
567188:567247	attL	NA	NA	NA	NA
WP_095503172.1\|567347_568490_-\|transposase	transposase	A0A1B0VCD8	Salmonella_phage	1.6e-121	57.3
WP_095503171.1\|568534_568951_+\|transposase	IS200/IS605 family transposase	A0A1S5RHE3	Helicobacter_phage	9.3e-51	66.4
WP_100564591.1\|569154_570153_-\|tRNA	tRNA dihydrouridine synthase DusB	NA	NA	NA	NA
WP_154212852.1\|570275_573503_-	exodeoxyribonuclease V subunit gamma	NA	NA	NA	NA
WP_100563546.1\|573787_575200_+	PepSY domain-containing protein	NA	NA	NA	NA
WP_154212853.1\|575583_576390_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_154212854.1\|576435_578919_-	hypothetical protein	NA	NA	NA	NA
WP_095503786.1\|578941_579838_-	OmpA family protein	NA	NA	NA	NA
WP_100564339.1\|580330_583822_+	chromosome segregation protein SMC	NA	NA	NA	NA
WP_100564341.1\|584100_585570_-	YdiU family protein	A0A075BSJ0	Microcystis_phage	2.9e-54	39.6
WP_095503783.1\|585712_586207_+	DMP19 family protein	NA	NA	NA	NA
WP_100564349.1\|586294_587632_-	NADP-specific glutamate dehydrogenase	NA	NA	NA	NA
WP_100564343.1\|588051_588846_+	thymidylate synthase	A0A2R4A1R4	Microbacterium_phage	5.1e-106	69.8
WP_095503781.1\|588909_590079_-	lipopolysaccharide assembly protein LapB	NA	NA	NA	NA
WP_100564345.1\|590087_590423_-	DUF1049 domain-containing protein	NA	NA	NA	NA
WP_100564347.1\|590960_591959_+	branched-chain-amino-acid transaminase	NA	NA	NA	NA
WP_154143172.1\|592074_593034_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	1.0e-31	31.4
WP_095502199.1\|593179_593377_+	zinc-finger domain-containing protein	NA	NA	NA	NA
WP_100564622.1\|593386_593737_+	hypothetical protein	NA	NA	NA	NA
WP_095501637.1\|593899_594724_-	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA
WP_154212855.1\|594888_595848_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	3.8e-31	31.1
WP_100563548.1\|596006_596693_-	thiol:disulfide interchange protein DsbA/DsbL	NA	NA	NA	NA
WP_095501635.1\|596696_597746_-	hypothetical protein	NA	NA	NA	NA
WP_095501634.1\|597948_599445_-	YifB family Mg chelatase-like AAA ATPase	NA	NA	NA	NA
WP_095501633.1\|599458_599785_-	accessory factor UbiK family protein	NA	NA	NA	NA
WP_095501632.1\|599884_601054_-	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	6.1e-124	60.4
WP_095501631.1\|601437_602367_+	lysophospholipid acyltransferase family protein	NA	NA	NA	NA
WP_100563550.1\|602427_603270_-	serine O-acetyltransferase	NA	NA	NA	NA
WP_100563552.1\|603455_604037_+	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_100563554.1\|604357_606286_+	molecular chaperone DnaK	A0A0N9QXN8	Chrysochromulina_ericina_virus	2.9e-147	49.2
WP_100563555.1\|606597_606888_+	acid-shock protein	NA	NA	NA	NA
WP_100563556.1\|606963_607881_-	calcium-binding protein	NA	NA	NA	NA
WP_100563557.1\|608185_609604_-	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	8.1e-54	34.7
WP_095501625.1\|609943_610417_+	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA
WP_095501624.1\|610480_611257_-	FadR family transcriptional regulator	NA	NA	NA	NA
WP_095501623.1\|611630_611843_+	hypothetical protein	NA	NA	NA	NA
WP_095501622.1\|612025_612676_-	glutaredoxin, GrxB family	NA	NA	NA	NA
WP_095501621.1\|612858_615069_+	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	NA	NA	NA
WP_095501620.1\|615132_615909_+	MOSC domain-containing protein	NA	NA	NA	NA
WP_095501619.1\|615992_616127_-	DUF3149 domain-containing protein	NA	NA	NA	NA
WP_095501618.1\|616428_618312_-	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA
WP_154212856.1\|618493_619063_+	hypothetical protein	NA	NA	NA	NA
WP_100563564.1\|619263_620166_-	tyrosine recombinase XerC	A0A0K2CP59	Brevibacillus_phage	3.0e-22	27.6
WP_095501615.1\|620168_620597_-	thioesterase	NA	NA	NA	NA
WP_095501614.1\|620815_621880_+	fructose-bisphosphate aldolase class II	NA	NA	NA	NA
WP_100563565.1\|622023_623166_-	porin	NA	NA	NA	NA
WP_100563566.1\|623531_624332_-\|tRNA	tRNA pseudouridine(38-40) synthase TruA	NA	NA	NA	NA
WP_100563567.1\|624436_626788_-	TspA protein	NA	NA	NA	NA
WP_095501610.1\|627292_627586_+	YciI family protein	NA	NA	NA	NA
WP_095501609.1\|627588_627858_+	BolA family transcriptional regulator	NA	NA	NA	NA
WP_095501608.1\|627881_628754_+	hypothetical protein	NA	NA	NA	NA
WP_095501607.1\|628773_629535_+	peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA
WP_100563568.1\|629695_630157_+\|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	NA	NA	NA	NA
WP_100563569.1\|630249_630777_-	gluconokinase	NA	NA	NA	NA
WP_100563570.1\|630787_632173_-	GntP family permease	NA	NA	NA	NA
WP_095501603.1\|632410_633049_-	peptidase C39	NA	NA	NA	NA
WP_100563571.1\|633194_633650_-	RDD family protein	NA	NA	NA	NA
WP_100563573.1\|633816_634134_-	hypothetical protein	NA	NA	NA	NA
WP_095503172.1\|634262_635405_-\|transposase	transposase	A0A1B0VCD8	Salmonella_phage	1.6e-121	57.3
634103:635955	attR	NA	NA	NA	NA

DBSCAN-SWA_5

736355 : 763539

Pseudomonas_phage(25.0%)

integrase,protease,transposase

attL 746372:746405|attR 774396:774429

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_095502302.1\|736355_736763_-\|protease	ClpXP protease specificity-enhancing factor	A0A1S5R3H3	Pseudomonas_phage	2.7e-18	43.3
WP_100562588.1\|736785_737391_-	stringent starvation protein A	NA	NA	NA	NA
WP_095502300.1\|737583_738387_-	cytochrome c1	NA	NA	NA	NA
WP_095502299.1\|738386_739736_-	cytochrome bc complex cytochrome b subunit	NA	NA	NA	NA
WP_095502298.1\|739754_740336_-	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA
WP_095502297.1\|740460_741210_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA
WP_095502296.1\|741396_742326_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_100562590.1\|742565_744023_+	magnesium transporter	NA	NA	NA	NA
WP_100562592.1\|744157_745417_+	putative DNA modification/repair radical SAM protein	NA	NA	NA	NA
WP_095502293.1\|745492_746287_+	DNA metabolism protein	NA	NA	NA	NA
746372:746405	attL	NA	NA	NA	NA
WP_095502292.1\|746557_747241_-	2,3-diphosphoglycerate-dependent phosphoglycerate mutase	NA	NA	NA	NA
WP_095502291.1\|747546_747855_+	DUF406 family protein	NA	NA	NA	NA
WP_154212829.1\|748038_748845_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_095503172.1\|749839_750982_-\|transposase	transposase	A0A1B0VCD8	Salmonella_phage	1.6e-121	57.3
WP_095503171.1\|751026_751443_+\|transposase	IS200/IS605 family transposase	A0A1S5RHE3	Helicobacter_phage	9.3e-51	66.4
WP_095502289.1\|752240_752858_-	biliverdin-producing heme oxygenase	NA	NA	NA	NA
WP_100564525.1\|752934_755352_-	TonB-dependent hemoglobin/transferrin/lactoferrin family receptor	NA	NA	NA	NA
WP_100564527.1\|755385_756405_-	hemoglobin-haptoglobin-utilization protein A	NA	NA	NA	NA
WP_100564529.1\|756559_758086_+	DUF560 domain-containing protein	NA	NA	NA	NA
WP_154212857.1\|758210_759245_-	cardiolipin synthase	NA	NA	NA	NA
WP_154212858.1\|759298_760105_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_100564624.1\|760194_762483_+	TonB-dependent receptor	NA	NA	NA	NA
WP_154143172.1\|762579_763539_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	1.0e-31	31.4
774396:774429	attR	NA	NA	NA	NA

DBSCAN-SWA_6

1002568 : 1061432

Bacillus_phage(21.43%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_095503518.1\|1002568_1003273_+\|tRNA	tRNA pseudouridine(65) synthase TruC	NA	NA	NA	NA
WP_100562870.1\|1003352_1003721_-	DUF86 domain-containing protein	NA	NA	NA	NA
WP_095503520.1\|1003717_1004008_-	nucleotidyltransferase family protein	NA	NA	NA	NA
WP_100562872.1\|1004168_1006031_+	RNB domain-containing ribonuclease	NA	NA	NA	NA
WP_100562874.1\|1006137_1007547_-	amino acid permease	NA	NA	NA	NA
WP_100562876.1\|1007768_1008398_+	tellurite resistance TerB family protein	NA	NA	NA	NA
WP_154212927.1\|1008660_1009593_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_115430705.1\|1009750_1010501_+\|transposase	IS5-like element IS1301 family transposase	A0A0N9SHJ4	Paenibacillus_phage	1.3e-15	36.7
WP_154143231.1\|1010823_1010994_-	hypothetical protein	NA	NA	NA	NA
WP_100564419.1\|1011062_1011953_-	homocysteine S-methyltransferase family protein	NA	NA	NA	NA
WP_100564421.1\|1012030_1016209_-	translocation/assembly module TamB	NA	NA	NA	NA
WP_095503525.1\|1016342_1018193_-	outer membrane protein assembly factor	NA	NA	NA	NA
WP_095503526.1\|1018542_1019763_+	serine/threonine transporter SstT	NA	NA	NA	NA
WP_100564423.1\|1020368_1021265_-	polyprenyl synthetase family protein	NA	NA	NA	NA
WP_095503528.1\|1021248_1021476_-	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA
WP_095502839.1\|1021579_1022446_-	ribosome small subunit-dependent GTPase A	NA	NA	NA	NA
WP_095503842.1\|1022719_1023397_-\|transposase	IS1595-like element ISNme3 family transposase	NA	NA	NA	NA
WP_100563688.1\|1023642_1024728_+	hypothetical protein	NA	NA	NA	NA
WP_095502837.1\|1024799_1026170_-	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	7.2e-108	45.1
WP_100563720.1\|1026397_1026985_-	YdcF family protein	NA	NA	NA	NA
WP_100563690.1\|1027051_1028155_-	peptide chain release factor 2	W8EDB3	Pseudomonas_phage	2.0e-07	29.5
WP_095502834.1\|1028275_1029184_-	patatin-like phospholipase family protein	A0A1V0SKV5	Klosneuvirus	1.1e-06	26.7
WP_100563722.1\|1029311_1031168_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	4.3e-31	25.5
WP_095502833.1\|1031334_1031571_-	methionine-binding protein	NA	NA	NA	NA
WP_095502832.1\|1031639_1032224_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA
WP_095502831.1\|1032627_1033341_+	hypothetical protein	NA	NA	NA	NA
WP_095502830.1\|1033417_1033804_-	hypothetical protein	NA	NA	NA	NA
WP_095502829.1\|1033854_1034715_-	septal ring lytic transglycosylase RlpA family protein	F5B3X9	Synechococcus_phage	2.7e-20	45.9
WP_095502828.1\|1034796_1035261_-\|tRNA	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	NA	NA	NA	NA
WP_095502827.1\|1035325_1036051_-	ComF family protein	NA	NA	NA	NA
WP_095502826.1\|1036049_1036793_+	pimeloyl-ACP methyl ester esterase BioH	NA	NA	NA	NA
WP_100563692.1\|1036794_1037583_+	methyltransferase	NA	NA	NA	NA
WP_095501792.1\|1037647_1038895_-	GIY-YIG nuclease family protein	NA	NA	NA	NA
WP_100563725.1\|1038894_1040979_-	ATP-dependent helicase	NA	NA	NA	NA
WP_154212864.1\|1041123_1043835_-	N-6 DNA methylase	Q6NE04	Leptospira_phage	8.5e-169	40.8
WP_154212865.1\|1043819_1043996_-	hypothetical protein	NA	NA	NA	NA
WP_100563696.1\|1044088_1046248_-	ATP-dependent DNA helicase DinG	A0A1X9I5C8	Streptococcus_phage	5.1e-15	32.1
WP_100563698.1\|1046408_1046597_-	zf-HC2 domain-containing protein	NA	NA	NA	NA
WP_100563700.1\|1046601_1047180_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_100563702.1\|1047176_1047872_-	DUF2063 domain-containing protein	NA	NA	NA	NA
WP_100563704.1\|1047864_1048704_-	DUF692 domain-containing protein	NA	NA	NA	NA
WP_100563706.1\|1048888_1049170_-	hypothetical protein	NA	NA	NA	NA
WP_100563708.1\|1049268_1049688_-	DoxX family protein	NA	NA	NA	NA
WP_100563710.1\|1049978_1052297_-	DNA helicase RecQ	A0A0G2Y8K9	Acanthamoeba_polyphaga_mimivirus	5.0e-77	35.5
WP_100563712.1\|1052465_1052903_+	hypothetical protein	NA	NA	NA	NA
WP_095503625.1\|1052992_1053565_-	L-threonylcarbamoyladenylate synthase	S4VW33	Pandoravirus	7.8e-08	27.8
WP_095503624.1\|1053636_1054908_-	phosphoribosylamine--glycine ligase	NA	NA	NA	NA
WP_100563727.1\|1055083_1055692_-	YigZ family protein	A0A1X9I5T8	Streptococcus_phage	1.8e-18	37.1
WP_095503623.1\|1055763_1056699_-	electron transfer flavoprotein subunit alpha/FixB family protein	NA	NA	NA	NA
WP_100563714.1\|1056711_1057461_-	electron transfer flavoprotein subunit beta/FixA family protein	NA	NA	NA	NA
WP_100563716.1\|1057545_1058526_-	lipopolysaccharide heptosyltransferase I	NA	NA	NA	NA
WP_095503620.1\|1058735_1059416_+\|tRNA	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	NA	NA	NA	NA
WP_100563718.1\|1059393_1059684_+	hypothetical protein	NA	NA	NA	NA
WP_115430705.1\|1059838_1060589_+\|transposase	IS5-like element IS1301 family transposase	A0A0N9SHJ4	Paenibacillus_phage	1.3e-15	36.7
WP_154212866.1\|1060571_1060757_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	1.2e-05	49.1
WP_154212867.1\|1060805_1061432_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	5.3e-34	46.2

DBSCAN-SWA_7

1064621 : 1101716

Burkholderia_virus(33.33%)

integrase,transposase,tail,head,plate

attL 1064248:1064270|attR 1085652:1085674

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1064248:1064270	attL	NA	NA	NA	NA
WP_100563452.1\|1064621_1065062_-	phage virion morphogenesis protein	X4YTG5	Pseudomonas_phage	4.3e-22	43.8
WP_100563454.1\|1065064_1065970_-\|head	phage head morphogenesis protein	H6V8N8	Pseudomonas_phage	2.4e-59	47.0
WP_095501644.1\|1065969_1067442_-	DUF935 family protein	A4JWJ5	Burkholderia_virus	7.7e-108	45.2
WP_100563456.1\|1067464_1068979_-	hypothetical protein	Q6QIC1	Burkholderia_phage	2.4e-197	67.8
WP_095501642.1\|1068975_1069521_-	DUF3486 family protein	A4JWJ3	Burkholderia_virus	5.3e-38	46.4
WP_095501641.1\|1069523_1069841_-	hypothetical protein	A0A2H4JGU5	uncultured_Caudovirales_phage	8.4e-28	66.0
WP_100563458.1\|1069837_1070158_-	hypothetical protein	Q6QIC4	Burkholderia_phage	5.0e-12	42.3
WP_100563460.1\|1070160_1070373_-	TraR/DksA family transcriptional regulator	F1BUS2	Erwinia_phage	2.7e-06	43.1
WP_095501650.1\|1070365_1070569_-	hypothetical protein	NA	NA	NA	NA
WP_100563462.1\|1070564_1070960_-	hypothetical protein	NA	NA	NA	NA
WP_095501649.1\|1070943_1071198_-	hypothetical protein	NA	NA	NA	NA
WP_100563464.1\|1071197_1071380_-	hypothetical protein	NA	NA	NA	NA
WP_100563466.1\|1071389_1071887_-	glycoside hydrolase family 108 protein	A0A0M3LSH2	Mannheimia_phage	1.7e-54	63.8
WP_154212868.1\|1071973_1072129_-	hypothetical protein	NA	NA	NA	NA
WP_100563468.1\|1072125_1072344_-	hypothetical protein	NA	NA	NA	NA
WP_154212869.1\|1072577_1073042_-	hypothetical protein	NA	NA	NA	NA
WP_100563472.1\|1073243_1073858_-	hypothetical protein	NA	NA	NA	NA
WP_100563474.1\|1073941_1074205_-	DUF3486 family protein	Q6QIC2	Burkholderia_phage	9.8e-06	41.4
WP_154212870.1\|1074204_1074576_-	helix-turn-helix domain-containing protein	A0A2H4JFL3	uncultured_Caudovirales_phage	1.1e-07	33.0
WP_154212871.1\|1074679_1075003_-	hypothetical protein	NA	NA	NA	NA
WP_100563478.1\|1075091_1075319_+	DNA-binding protein	NA	NA	NA	NA
WP_100563480.1\|1075308_1075542_+	hypothetical protein	NA	NA	NA	NA
WP_100563482.1\|1075542_1075833_+	DNA-binding protein	NA	NA	NA	NA
WP_100563484.1\|1075877_1076738_+	DUF3102 domain-containing protein	A4JWN3	Burkholderia_virus	1.5e-42	39.4
WP_100563486.1\|1076734_1078513_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	Q6QIE0	Burkholderia_phage	2.7e-147	48.1
WP_100563488.1\|1078553_1079696_+	AAA family ATPase	A4JWN1	Burkholderia_virus	1.0e-107	52.8
WP_100563490.1\|1079695_1079899_+	hypothetical protein	NA	NA	NA	NA
WP_100563492.1\|1079895_1080108_+	hypothetical protein	NA	NA	NA	NA
WP_100563494.1\|1080109_1080358_+	hypothetical protein	NA	NA	NA	NA
WP_100563496.1\|1080354_1080864_+	hypothetical protein	A0A2H4JFV8	uncultured_Caudovirales_phage	6.7e-27	48.4
WP_100563498.1\|1080847_1081312_+	hypothetical protein	NA	NA	NA	NA
WP_100563500.1\|1081308_1081914_+	DUF3164 family protein	A0A2H4IYN0	uncultured_Caudovirales_phage	1.8e-55	56.2
WP_100563502.1\|1081967_1082258_+	HU family DNA-binding protein	Q2A099	Sodalis_phage	4.1e-13	45.7
WP_100563504.1\|1082433_1082910_+	regulatory protein GemA	A4JWM5	Burkholderia_virus	2.1e-22	45.5
WP_100563506.1\|1082902_1083241_+	transcriptional regulator	Q6QIE8	Burkholderia_phage	5.6e-14	38.7
WP_100563508.1\|1083518_1084652_+	2-oxoacid:acceptor oxidoreductase	A4JWJ9	Burkholderia_virus	4.2e-69	41.6
WP_100563510.1\|1084693_1085629_+	hypothetical protein	A4JWK0	Burkholderia_virus	5.9e-53	41.9
WP_100563512.1\|1085687_1086020_+	DUF2190 family protein	NA	NA	NA	NA
1085652:1085674	attR	NA	NA	NA	NA
WP_100563514.1\|1086022_1086280_+	hypothetical protein	NA	NA	NA	NA
WP_100563516.1\|1086279_1086708_+	DUF1320 domain-containing protein	A0A0M3LP98	Mannheimia_phage	2.8e-10	32.1
WP_100563518.1\|1086709_1087213_+	hypothetical protein	NA	NA	NA	NA
WP_100563520.1\|1087212_1088604_+\|tail	phage tail protein	A4JWK5	Burkholderia_virus	3.9e-101	45.1
WP_100563522.1\|1088614_1089130_+\|tail	phage major tail tube protein	NA	NA	NA	NA
WP_100563524.1\|1089242_1089536_+\|tail	phage tail assembly protein	Q6QIA8	Burkholderia_phage	7.1e-05	37.7
WP_100563526.1\|1089564_1089708_+\|tail	GpE family phage tail protein	NA	NA	NA	NA
WP_100563528.1\|1089721_1089901_-	hypothetical protein	NA	NA	NA	NA
WP_100563530.1\|1089941_1092587_+\|tail	phage tail tape measure protein	K4ICR4	Acidithiobacillus_phage	3.8e-89	33.9
WP_100563532.1\|1092586_1093483_+\|tail	phage tail protein	NA	NA	NA	NA
WP_049332801.1\|1093479_1093698_+	membrane protein	Q6QIA3	Burkholderia_phage	1.6e-09	39.7
WP_100563534.1\|1093708_1094809_+	hypothetical protein	A4JWL3	Burkholderia_virus	2.4e-74	44.9
WP_100563536.1\|1094792_1095371_+\|plate	phage baseplate assembly protein V	A4JWL4	Burkholderia_virus	7.9e-24	39.5
WP_100563538.1\|1095449_1095827_+\|plate	phage baseplate protein	NA	NA	NA	NA
WP_100563540.1\|1095817_1096957_+\|plate	baseplate J/gp47 family protein	A4JWL6	Burkholderia_virus	9.7e-58	40.5
WP_100563542.1\|1096959_1097535_+\|tail	phage tail protein	Q6QI98	Burkholderia_phage	3.3e-46	52.2
WP_154212872.1\|1097537_1099589_+	hypothetical protein	A0A2L0UZ85	Agrobacterium_phage	2.2e-15	32.2
WP_154212873.1\|1099589_1100195_+	hypothetical protein	NA	NA	NA	NA
WP_100564025.1\|1100194_1100653_+	hypothetical protein	F6MIM0	Haemophilus_phage	8.7e-34	50.6
WP_123796416.1\|1100788_1100896_+	Com family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_100564027.1\|1100945_1101716_+	DNA adenine methylase	Q5ZQW7	Pseudomonas_phage	1.4e-79	57.9

DBSCAN-SWA_8

1351991 : 1444287

Helicobacter_phage(11.11%)

transposase,integrase,tRNA

attL 1356770:1356829|attR 1397429:1399281

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_100564095.1\|1351991_1352531_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	6.4e-52	53.6
WP_100564093.1\|1352586_1353462_-	glucose-1-phosphate thymidylyltransferase RfbA	K7QKA7	Escherichia_phage	1.0e-107	65.3
WP_100564091.1\|1353526_1354588_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	3.6e-99	52.4
WP_100564088.1\|1354684_1355704_-	UDP-glucose 4-epimerase GalE	A0A2K9L5H6	Tupanvirus	2.8e-80	44.9
1356770:1356829	attL	NA	NA	NA	NA
WP_095503171.1\|1356858_1357275_-\|transposase	IS200/IS605 family transposase	A0A1S5RHE3	Helicobacter_phage	9.3e-51	66.4
WP_095503172.1\|1357319_1358462_+\|transposase	transposase	A0A1B0VCD8	Salmonella_phage	1.6e-121	57.3
WP_100564585.1\|1359380_1360868_-	alpha-2,9-polysialyltransferase	NA	NA	NA	NA
WP_100564583.1\|1360948_1361998_-	polysialic acid capsule biosynthesis protein SiaC	NA	NA	NA	NA
WP_100564581.1\|1361998_1362685_-	acylneuraminate cytidylyltransferase	NA	NA	NA	NA
WP_100564579.1\|1362688_1363822_-	UDP-N-acetylglucosamine 2-epimerase (hydrolyzing)	NA	NA	NA	NA
WP_154212860.1\|1363949_1364700_+\|transposase	IS5-like element IS1301 family transposase	A0A0N9SHJ4	Paenibacillus_phage	1.3e-15	36.7
WP_100564241.1\|1364793_1365969_+	capsule polysaccharide export outer membrane protein CtrA	NA	NA	NA	NA
WP_095502495.1\|1365983_1367147_+	capsule polysaccharide export protein CtrB	NA	NA	NA	NA
WP_100564242.1\|1367146_1367944_+	ABC transporter permease	NA	NA	NA	NA
WP_100564243.1\|1367940_1368591_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.2e-12	30.7
WP_095502755.1\|1368696_1369731_-	DUF1311 domain-containing protein	NA	NA	NA	NA
WP_095502756.1\|1369865_1371086_-	sodium/glutamate symporter	NA	NA	NA	NA
WP_095502757.1\|1371520_1373191_+	carbon starvation protein A	NA	NA	NA	NA
WP_095502758.1\|1373190_1373454_+	DNA helicase	NA	NA	NA	NA
WP_095502759.1\|1373444_1374461_+	ArsA family ATPase	NA	NA	NA	NA
WP_095502242.1\|1374537_1375140_-	uracil-DNA glycosylase family protein	NA	NA	NA	NA
WP_095502243.1\|1375195_1376212_-	virulence RhuM family protein	Q9JMN3	Wolbachia_phage	3.5e-67	42.8
WP_100564244.1\|1376241_1377219_-	DNA cytosine methyltransferase	A7XXH6	Thermus_virus	1.5e-51	36.9
WP_095502245.1\|1377182_1378625_-	DUF3883 domain-containing protein	NA	NA	NA	NA
WP_095502246.1\|1378621_1379665_-	DNA cytosine methyltransferase	M1PSQ0	Streptococcus_phage	3.1e-63	42.5
WP_100564245.1\|1379739_1382049_-	RNA-binding transcriptional accessory protein	NA	NA	NA	NA
WP_100564246.1\|1382171_1384802_-\|tRNA	leucine--tRNA ligase	A0A2H4PQS0	Staphylococcus_phage	8.5e-182	41.2
WP_154143172.1\|1384985_1385945_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	1.0e-31	31.4
WP_095502249.1\|1386479_1387622_+	molecular chaperone DnaJ	A0A0G2YAM9	Acanthamoeba_polyphaga_mimivirus	3.6e-20	31.7
WP_100564500.1\|1387703_1388678_-	GTP 3',8-cyclase MoaA	NA	NA	NA	NA
WP_100564498.1\|1388812_1389139_-	sulfurtransferase	NA	NA	NA	NA
WP_100564496.1\|1389267_1389924_-	protein-L-isoaspartate O-methyltransferase	NA	NA	NA	NA
WP_100564494.1\|1390006_1390498_-	GAF domain-containing protein	NA	NA	NA	NA
WP_100564492.1\|1390648_1391422_+	triose-phosphate isomerase	NA	NA	NA	NA
WP_095502255.1\|1391428_1391797_+	preprotein translocase subunit SecG	NA	NA	NA	NA
WP_100564490.1\|1392193_1393417_+\|integrase	tyrosine-type recombinase/integrase	A0A1B5FPC6	Escherichia_phage	3.0e-65	36.5
WP_095502257.1\|1394233_1394503_+	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA
WP_095502258.1\|1394504_1394927_+	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_100564488.1\|1395044_1395656_+	hypothetical protein	NA	NA	NA	NA
WP_095503172.1\|1395795_1396938_-\|transposase	transposase	A0A1B0VCD8	Salmonella_phage	1.6e-121	57.3
WP_095503171.1\|1396982_1397399_+\|transposase	IS200/IS605 family transposase	A0A1S5RHE3	Helicobacter_phage	9.3e-51	66.4
WP_100564606.1\|1397453_1397879_+	hypothetical protein	NA	NA	NA	NA
WP_100564604.1\|1398024_1398237_+	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_100564602.1\|1398247_1398556_+	hypothetical protein	NA	NA	NA	NA
WP_100564599.1\|1398552_1399119_+	antirepressor protein Ant domain protein	A0A1I9LJR6	Stx_converting_phage	1.4e-28	37.6
WP_100564597.1\|1399788_1399998_+	hypothetical protein	NA	NA	NA	NA
1397429:1399281	attR	NA	NA	NA	NA
WP_100564595.1\|1400000_1400210_+	hypothetical protein	NA	NA	NA	NA
WP_095502264.1\|1400353_1400536_+	hypothetical protein	NA	NA	NA	NA
WP_100564593.1\|1400532_1401624_+	DNA primase	A0A1W6JPG0	Morganella_phage	2.1e-17	48.9
WP_095503171.1\|1401840_1402257_-\|transposase	IS200/IS605 family transposase	A0A1S5RHE3	Helicobacter_phage	9.3e-51	66.4
WP_095503172.1\|1402301_1403444_+\|transposase	transposase	A0A1B0VCD8	Salmonella_phage	1.6e-121	57.3
WP_154212931.1\|1403547_1403760_+	hypothetical protein	A0A0P0ZE17	Stx2-converting_phage	1.2e-09	64.6
WP_154143250.1\|1403756_1404131_+	helix-turn-helix domain-containing protein	A0A0P0ZCT8	Stx2-converting_phage	1.9e-23	52.6
WP_100564441.1\|1404704_1405520_-	DNA ligase	F2Y1N0	Organic_Lake_phycodnavirus	4.8e-27	32.1
WP_100564443.1\|1405620_1406253_+	MBL fold metallo-hydrolase	A0A1X9I5D3	Streptococcus_phage	7.6e-20	29.8
WP_100564445.1\|1406400_1407669_+	OmpA family protein	NA	NA	NA	NA
WP_095502270.1\|1408120_1408633_+	outer membrane protein assembly factor BamE	NA	NA	NA	NA
WP_095502271.1\|1408644_1409073_+	L,D-transpeptidase	A0A2D2W2J6	Stenotrophomonas_phage	1.8e-20	47.6
WP_095502273.1\|1409386_1409911_+	DUF2478 domain-containing protein	NA	NA	NA	NA
WP_100564451.1\|1410009_1411257_-	beta-ketoacyl-ACP synthase II	NA	NA	NA	NA
WP_047759914.1\|1411421_1411658_-	acyl carrier protein	B2ZXV3	Ralstonia_phage	3.4e-10	43.8
WP_100564454.1\|1411914_1413954_-	S9 family peptidase	NA	NA	NA	NA
WP_100564456.1\|1414263_1414821_+	hypoxanthine-guanine phosphoribosyltransferase	A0A1V0SEQ1	Hokovirus	1.4e-06	29.1
WP_095503171.1\|1414890_1415307_-\|transposase	IS200/IS605 family transposase	A0A1S5RHE3	Helicobacter_phage	9.3e-51	66.4
WP_095503172.1\|1415351_1416494_+\|transposase	transposase	A0A1B0VCD8	Salmonella_phage	1.6e-121	57.3
WP_095502278.1\|1416789_1417230_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_095502279.1\|1417332_1417602_+	HPr family phosphocarrier protein	NA	NA	NA	NA
WP_100564057.1\|1417603_1419355_+	phosphoenolpyruvate--protein phosphotransferase	A0A1V0SGR7	Hokovirus	3.0e-10	26.2
WP_095502281.1\|1419394_1420147_-	16S rRNA methyltransferase	NA	NA	NA	NA
WP_100564059.1\|1420247_1421879_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA
WP_100564061.1\|1421871_1423452_-	HAMP domain-containing histidine kinase	NA	NA	NA	NA
WP_100564063.1\|1423626_1425960_-	DNA topoisomerase IV subunit A	G3M9Z5	Bacillus_virus	8.6e-77	35.8
WP_095502057.1\|1426229_1427375_+	5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase	A0A218MNE0	uncultured_virus	7.8e-132	60.9
WP_100564065.1\|1427462_1429031_-	aminobenzoyl-glutamate transporter	NA	NA	NA	NA
WP_095502055.1\|1429205_1429640_-	universal stress protein	NA	NA	NA	NA
WP_095502054.1\|1429869_1430310_-	universal stress protein	NA	NA	NA	NA
WP_095502053.1\|1430715_1431507_-	inositol monophosphatase family protein	NA	NA	NA	NA
WP_100564067.1\|1431651_1432377_+	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA
WP_100564069.1\|1432448_1434506_-\|tRNA	glycine--tRNA ligase subunit beta	NA	NA	NA	NA
WP_100564071.1\|1434672_1436523_-	lipid A export permease/ATP-binding protein MsbA	W8CYL7	Bacillus_phage	6.0e-41	27.8
WP_095501590.1\|1436681_1437587_-\|tRNA	glycine--tRNA ligase subunit alpha	NA	NA	NA	NA
WP_095501591.1\|1437817_1438357_+	OmpA family protein	NA	NA	NA	NA
WP_100564073.1\|1439140_1441123_-	potassium transporter	NA	NA	NA	NA
WP_095501593.1\|1441420_1442167_-	3-oxoacyl-ACP reductase FabG	Q06VL0	Trichoplusia_ni_ascovirus	6.2e-13	31.7
WP_154212881.1\|1442395_1443442_-	glycosyltransferase	NA	NA	NA	NA
WP_115430705.1\|1443535_1444287_-\|transposase	IS5-like element IS1301 family transposase	A0A0N9SHJ4	Paenibacillus_phage	1.3e-15	36.7

DBSCAN-SWA_9

1488855 : 1533103

Helicobacter_phage(17.65%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_100563112.1\|1488855_1490154_-\|tRNA	tyrosine--tRNA ligase	K4F5T3	Cronobacter_phage	6.2e-85	43.0
WP_100563114.1\|1490225_1491317_-	redox-regulated ATPase YchF	NA	NA	NA	NA
WP_100563116.1\|1491509_1493021_-	ubiquinone biosynthesis regulatory protein kinase UbiB	M4QMK7	Micromonas_pusilla_virus	8.6e-38	33.9
WP_100563118.1\|1493165_1493840_-	hypothetical protein	NA	NA	NA	NA
WP_095502099.1\|1494267_1494606_-	iron-sulfur cluster insertion protein ErpA	A0A2H4N7M3	Lake_Baikal_phage	3.4e-27	53.7
WP_095502100.1\|1494707_1495394_-	helix-turn-helix transcriptional regulator	A5X9F5	Aeromonas_virus	3.3e-29	37.9
WP_095502101.1\|1495704_1495980_+	hypothetical protein	NA	NA	NA	NA
WP_095502102.1\|1496091_1497135_-	N-acetyl-gamma-glutamyl-phosphate reductase	NA	NA	NA	NA
WP_095502103.1\|1497467_1498505_-	L,D-transpeptidase family protein	NA	NA	NA	NA
WP_097784581.1\|1498654_1499986_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	A0A2K5B251	Erysipelothrix_phage	1.1e-36	27.0
WP_100563120.1\|1500152_1501613_+	23S rRNA methyltransferase	NA	NA	NA	NA
WP_095503171.1\|1502265_1502682_-\|transposase	IS200/IS605 family transposase	A0A1S5RHE3	Helicobacter_phage	9.3e-51	66.4
WP_095503172.1\|1502726_1503869_+\|transposase	transposase	A0A1B0VCD8	Salmonella_phage	1.6e-121	57.3
WP_100564634.1\|1504481_1505273_+	fimb protein	NA	NA	NA	NA
WP_095503172.1\|1505830_1506973_-\|transposase	transposase	A0A1B0VCD8	Salmonella_phage	1.6e-121	57.3
WP_095503171.1\|1507017_1507434_+\|transposase	IS200/IS605 family transposase	A0A1S5RHE3	Helicobacter_phage	9.3e-51	66.4
WP_100564486.1\|1507764_1508208_+	pilin	NA	NA	NA	NA
WP_100564479.1\|1508901_1510086_-	5-demethoxyubiquinol-8 5-hydroxylase UbiM	NA	NA	NA	NA
WP_095503238.1\|1510547_1510820_-	50S ribosomal protein L27	NA	NA	NA	NA
WP_095503237.1\|1510847_1511156_-	50S ribosomal protein L21	NA	NA	NA	NA
WP_100564482.1\|1511373_1512348_+	octaprenyl diphosphate synthase	A0A1V0SE37	Indivirus	1.7e-07	25.6
WP_095503236.1\|1512360_1512807_+	DUF441 domain-containing protein	NA	NA	NA	NA
WP_095503235.1\|1512974_1513658_-	7-cyano-7-deazaguanine/7-aminomethyl-7- deazaguanine transporter	A0A2I7SAW6	Vibrio_phage	9.9e-58	57.3
WP_095503234.1\|1513742_1514216_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	E7DN65	Pneumococcus_phage	5.2e-50	67.6
WP_100564484.1\|1517295_1518216_-	homoserine kinase	NA	NA	NA	NA
WP_095503827.1\|1524355_1524643_+	topoisomerase	NA	NA	NA	NA
WP_095502448.1\|1525024_1526068_+	3-deoxy-7-phosphoheptulonate synthase AroG	A0A0B6VT43	Edwardsiella_phage	5.7e-81	47.6
WP_100564548.1\|1526144_1527428_+	hypothetical protein	NA	NA	NA	NA
WP_100564546.1\|1527797_1529360_+	TerC family protein	A0A0R6PEZ3	Moraxella_phage	6.9e-30	34.8
WP_095503606.1\|1529423_1530917_-	ribonuclease G	NA	NA	NA	NA
WP_100564544.1\|1531204_1531474_+	glutaredoxin 3	A0A0H3TP34	Faustovirus	3.8e-05	35.3
WP_095503171.1\|1531499_1531916_-\|transposase	IS200/IS605 family transposase	A0A1S5RHE3	Helicobacter_phage	9.3e-51	66.4
WP_095503172.1\|1531960_1533103_+\|transposase	transposase	A0A1B0VCD8	Salmonella_phage	1.6e-121	57.3

DBSCAN-SWA_10

1773827 : 1789883

Bacillus_phage(27.27%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_095502453.1\|1773827_1774802_+	PhoH family protein	H6X2N1	Pseudomonas_phage	3.6e-45	48.0
WP_100562883.1\|1774891_1775110_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	1.6e-09	50.7
WP_154212867.1\|1775158_1775785_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	5.3e-34	46.2
WP_095503833.1\|1775688_1776045_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_100564550.1\|1776157_1776799_-	NAD(P)H-binding protein	NA	NA	NA	NA
WP_095502921.1\|1777000_1777573_+	DUF4126 domain-containing protein	NA	NA	NA	NA
WP_100564555.1\|1777676_1779635_-	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	7.8e-31	29.7
WP_100564552.1\|1779818_1781606_-	DNA primase	A0A1S5RFN0	Helicobacter_phage	1.9e-44	33.5
WP_095503702.1\|1781678_1782128_-	GatB/YqeY domain-containing protein	A0A292GL36	Xanthomonas_phage	8.6e-18	45.6
WP_003680926.1\|1782254_1782467_-	30S ribosomal protein S21	NA	NA	NA	NA
WP_154212888.1\|1782894_1783854_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	3.8e-31	31.1
WP_100563930.1\|1783904_1786061_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	A0A2K9L285	Tupanvirus	1.2e-08	33.8
WP_095502195.1\|1786263_1786470_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA
WP_095502194.1\|1786523_1787141_-	guanylate kinase	A0A240FAU9	Liberibacter_phage	3.9e-13	28.0
WP_100563932.1\|1787278_1787839_+	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	5.8e-32	41.1
WP_100563934.1\|1788032_1789883_+	lytic transglycosylase domain-containing protein	A0A0S2SXL7	Bacillus_phage	1.4e-13	38.5

DBSCAN-SWA_11

1882454 : 1890106

Streptococcus_phage(87.5%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_100563424.1\|1882454_1883918_+	methyltransferase domain-containing protein	A0A1X9I6N4	Streptococcus_phage	2.2e-110	98.0
WP_001255864.1\|1883950_1884859_+	aminoglycoside nucleotidyltransferase ANT(6)-Ia	E4ZFP8	Streptococcus_phage	2.0e-167	93.4
WP_000627289.1\|1884855_1885386_+	streptothricin N-acetyltransferase Sat4	A0A1B0RXL7	Streptococcus_phage	1.3e-89	97.8
WP_001096887.1\|1885478_1886273_+	aminoglycoside O-phosphotransferase APH(3')-IIIa	E4ZFP6	Streptococcus_phage	2.3e-154	100.0
WP_078154339.1\|1886905_1887121_+	WYL domain-containing protein	E4ZFP5	Streptococcus_phage	3.4e-33	98.6
WP_072387101.1\|1887093_1887501_+	WYL domain-containing protein	A0A1B0RXM3	Streptococcus_phage	1.1e-59	98.3
WP_000802831.1\|1887611_1888271_+	RibD family protein	A0A1B0RXM8	Streptococcus_phage	3.1e-125	100.0
WP_001835223.1\|1888238_1888436_-	hypothetical protein	NA	NA	NA	NA
WP_000582200.1\|1888932_1889184_+	hypothetical protein	NA	NA	NA	NA
WP_115430705.1\|1889355_1890106_+\|transposase	IS5-like element IS1301 family transposase	A0A0N9SHJ4	Paenibacillus_phage	1.3e-15	36.7

DBSCAN-SWA_12

2021668 : 2060188

Helicobacter_phage(18.18%)

transposase,integrase

attL 2030340:2030357|attR 2055609:2055626

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_095503171.1\|2021668_2022085_-\|transposase	IS200/IS605 family transposase	A0A1S5RHE3	Helicobacter_phage	9.3e-51	66.4
WP_095503172.1\|2022129_2023272_+\|transposase	transposase	A0A1B0VCD8	Salmonella_phage	1.6e-121	57.3
WP_100564221.1\|2023529_2024327_+	pyruvate formate lyase 1-activating protein	A0A2P0VNQ0	Tetraselmis_virus	1.2e-22	27.8
WP_095503400.1\|2024397_2025054_-	response regulator transcription factor	NA	NA	NA	NA
WP_095503421.1\|2025050_2026937_-	HAMP domain-containing protein	NA	NA	NA	NA
WP_095503401.1\|2027141_2027390_+	MoaD/ThiS family protein	NA	NA	NA	NA
WP_095503402.1\|2027391_2027856_+	molybdenum cofactor biosynthesis protein MoaE	NA	NA	NA	NA
WP_095503403.1\|2027852_2028431_+	molybdenum cofactor guanylyltransferase	NA	NA	NA	NA
WP_100564219.1\|2028430_2029630_+	molybdopterin molybdotransferase MoeA	NA	NA	NA	NA
WP_100564217.1\|2029678_2030245_-	peptidyl-prolyl cis-trans isomerase	A0A076FI46	Aureococcus_anophage	5.7e-11	32.9
2030340:2030357	attL	NA	NA	NA	NA
WP_095503406.1\|2030391_2030955_-	polyisoprenoid-binding protein	NA	NA	NA	NA
WP_100564215.1\|2031145_2032216_-	3-isopropylmalate dehydrogenase	NA	NA	NA	NA
WP_095503408.1\|2032280_2032586_-	hypothetical protein	NA	NA	NA	NA
WP_095503409.1\|2032623_2033088_-	DUF386 domain-containing protein	NA	NA	NA	NA
WP_100564214.1\|2033137_2033938_-	cation diffusion facilitator family transporter	NA	NA	NA	NA
WP_095503411.1\|2034077_2034716_-	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA
WP_095503412.1\|2034796_2034934_-	entericidin A/B family lipoprotein	NA	NA	NA	NA
WP_095503413.1\|2034968_2035106_-	entericidin A/B family lipoprotein	NA	NA	NA	NA
WP_095503414.1\|2035240_2036647_-	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA
WP_100564212.1\|2036981_2039768_+	DNA gyrase subunit A	A0A172JHV7	Bacillus_phage	3.3e-91	30.4
WP_100564210.1\|2039871_2040690_+	GIY-YIG nuclease family protein	A0A088F856	Sulfitobacter_phage	2.9e-11	42.0
WP_095502752.1\|2041569_2043447_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_100564208.1\|2043510_2044095_+	outer membrane lipoprotein LolB	NA	NA	NA	NA
WP_095502751.1\|2044104_2044950_+	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA
WP_095503171.1\|2045332_2045749_-\|transposase	IS200/IS605 family transposase	A0A1S5RHE3	Helicobacter_phage	9.3e-51	66.4
WP_095503172.1\|2045793_2046936_+\|transposase	transposase	A0A1B0VCD8	Salmonella_phage	1.6e-121	57.3
WP_095503778.1\|2047243_2048233_+	ribose-phosphate pyrophosphokinase	A0A1V0SHF7	Hokovirus	2.4e-44	34.0
WP_100564612.1\|2048300_2048873_+	50S ribosomal protein L25/general stress protein Ctc	NA	NA	NA	NA
WP_095503775.1\|2049091_2049562_-	prepilin-type N-terminal cleavage/methylation domain-containing protein	A0A1W6JT76	Pseudomonas_phage	5.1e-05	23.7
WP_095503774.1\|2049554_2050127_-	pilus assembly protein	NA	NA	NA	NA
WP_154212894.1\|2050105_2050384_-	hypothetical protein	NA	NA	NA	NA
WP_154212829.1\|2050444_2051251_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_154212895.1\|2050972_2051953_-	pilus assembly protein PilW	NA	NA	NA	NA
WP_095503777.1\|2051955_2052531_-	type IV pilus modification protein PilV	NA	NA	NA	NA
WP_095503772.1\|2052602_2053268_-	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA
WP_095503771.1\|2053427_2054834_-	replicative DNA helicase	O80281	Escherichia_phage	1.5e-129	55.1
WP_100563973.1\|2055003_2055585_+	superoxide dismutase	NA	NA	NA	NA
WP_100563971.1\|2056080_2056419_-	general secretion pathway protein GspG	NA	NA	NA	NA
2055609:2055626	attR	NA	NA	NA	NA
WP_095503768.1\|2056538_2057234_-	aquaporin Z	NA	NA	NA	NA
WP_100563969.1\|2057542_2059576_+	excinuclease ABC subunit B	NA	NA	NA	NA
WP_095503766.1\|2059693_2060188_+\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_13

2191153 : 2243691

Staphylococcus_phage(27.27%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_095503154.1\|2191153_2192866_+\|tRNA	proline--tRNA ligase	NA	NA	NA	NA
WP_095503153.1\|2193193_2194669_-	S41 family peptidase	A0A0R6PIZ1	Moraxella_phage	4.5e-23	27.0
WP_095503152.1\|2194898_2196749_-	peptidoglycan DD-metalloendopeptidase family protein	NA	NA	NA	NA
WP_095503171.1\|2196973_2197390_-\|transposase	IS200/IS605 family transposase	A0A1S5RHE3	Helicobacter_phage	9.3e-51	66.4
WP_095503172.1\|2197434_2198577_+\|transposase	transposase	A0A1B0VCD8	Salmonella_phage	1.6e-121	57.3
WP_154143177.1\|2198754_2199315_+	CreA protein	NA	NA	NA	NA
WP_100564425.1\|2199327_2199876_+	YqgE/AlgH family protein	NA	NA	NA	NA
WP_095503150.1\|2199868_2200336_+	Holliday junction resolvase RuvX	NA	NA	NA	NA
WP_095503149.1\|2200494_2200917_+	DUF937 domain-containing protein	NA	NA	NA	NA
WP_100564427.1\|2201007_2201592_-	DedA family protein	NA	NA	NA	NA
WP_095503147.1\|2201782_2202451_+	DnaA regulatory inactivator Hda	NA	NA	NA	NA
WP_100564429.1\|2202447_2203116_+	HAD family hydrolase	NA	NA	NA	NA
WP_095503145.1\|2203128_2203452_+	divalent-cation tolerance protein CutA	NA	NA	NA	NA
WP_095503144.1\|2203543_2203927_+	aspartate 1-decarboxylase	NA	NA	NA	NA
WP_100564431.1\|2204040_2204883_+	3-deoxy-8-phosphooctulonate synthase	E3T537	Cafeteria_roenbergensis_virus	3.9e-48	40.6
WP_100564433.1\|2206671_2208258_-	YdgA family protein	NA	NA	NA	NA
WP_100564435.1\|2208506_2208707_-	hypothetical protein	NA	NA	NA	NA
WP_100564437.1\|2208838_2209978_+	homoserine O-acetyltransferase	NA	NA	NA	NA
WP_095503138.1\|2209974_2210556_+	methionine biosynthesis protein MetW	NA	NA	NA	NA
WP_154143172.1\|2210624_2211584_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	1.0e-31	31.4
WP_095503137.1\|2211833_2212313_-	acyl-CoA thioesterase	NA	NA	NA	NA
WP_100564369.1\|2212392_2213475_-	magnesium/cobalt transporter CorA	NA	NA	NA	NA
WP_095503135.1\|2213551_2215363_-	translational GTPase TypA	NA	NA	NA	NA
WP_100564371.1\|2215796_2216261_+	bacterioferritin	NA	NA	NA	NA
WP_095503133.1\|2216280_2216754_+	bacterioferritin	NA	NA	NA	NA
WP_100564385.1\|2217049_2217991_-	bile acid:sodium symporter family protein	NA	NA	NA	NA
WP_100564373.1\|2218210_2219125_-	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA
WP_095503208.1\|2219201_2219861_+	nickel-dependent hydrogenase b-type cytochrome subunit	NA	NA	NA	NA
WP_100564375.1\|2219919_2220639_-\|tRNA	tRNA-specific adenosine deaminase	NA	NA	NA	NA
WP_100564377.1\|2220640_2221591_-\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA
WP_100564379.1\|2221682_2222981_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_100564381.1\|2223068_2223344_+	hypothetical protein	NA	NA	NA	NA
WP_100564383.1\|2223410_2224541_-	alanine--glyoxylate aminotransferase family protein	A0A0N9QIZ2	Chrysochromulina_ericina_virus	7.8e-84	42.4
WP_154212901.1\|2225085_2226045_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	5.0e-31	30.8
WP_095503800.1\|2226136_2227039_+	zinc-dependent alcohol dehydrogenase family protein	NA	NA	NA	NA
WP_100564409.1\|2227147_2227546_-	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA
WP_100564411.1\|2227617_2228232_+	cation transporter	NA	NA	NA	NA
WP_100564413.1\|2228444_2229461_-	ACR3 family arsenite efflux transporter	NA	NA	NA	NA
WP_095502049.1\|2229464_2229869_-	arsenate reductase (glutaredoxin)	A0A2H4J8T1	uncultured_Caudovirales_phage	6.9e-35	60.5
WP_014550505.1\|2229933_2230236_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_100564415.1\|2231903_2232854_+	nitronate monooxygenase	NA	NA	NA	NA
WP_095501739.1\|2232938_2233520_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_095501740.1\|2233623_2234379_+	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_095501741.1\|2235387_2235744_+	STAS/SEC14 domain-containing protein	NA	NA	NA	NA
WP_100564417.1\|2236789_2237374_-	DUF2238 domain-containing protein	NA	NA	NA	NA
WP_095501743.1\|2237614_2239333_-\|tRNA	arginine--tRNA ligase	A0A2K9L2F0	Tupanvirus	2.2e-85	33.4
WP_154143182.1\|2239516_2240383_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	1.8e-27	31.2
WP_154212902.1\|2240464_2240872_-	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA
WP_100564565.1\|2240967_2241864_+	sodium:proton antiporter	NA	NA	NA	NA
WP_008609163.1\|2241867_2242380_+	signal peptidase II	NA	NA	NA	NA
WP_154212903.1\|2242401_2243691_+\|transposase	ISL3 family transposase	A0A2D1GQC1	Lysinibacillus_phage	2.2e-82	39.8

DBSCAN-SWA_14

2254151 : 2295446

Mannheimia_phage(29.03%)

integrase,transposase,tail,head,plate,terminase

attL 2252780:2252808|attR 2298092:2298120

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2252780:2252808	attL	NA	NA	NA	NA
WP_154143173.1\|2254151_2255942_+	2-isopropylmalate synthase	E5EQ69	Micromonas_sp._RCC1109_virus	2.9e-08	25.9
WP_095503467.1\|2256024_2256507_-	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	5.2e-21	42.9
WP_095503468.1\|2256589_2257360_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_095503469.1\|2257363_2258032_-	O-methyltransferase	NA	NA	NA	NA
WP_095503470.1\|2258045_2258231_-	DUF3460 family protein	NA	NA	NA	NA
WP_100563314.1\|2258482_2259838_+	polynucleotide adenylyltransferase PcnB	H7BUW3	unidentified_phage	8.0e-27	39.1
WP_097784624.1\|2260081_2260537_-	helix-turn-helix transcriptional regulator	X4YTE2	Pseudomonas_phage	1.9e-12	37.4
WP_095503825.1\|2261150_2261510_-	helix-turn-helix domain-containing protein	K4NXA8	Burkholderia_phage	3.8e-08	39.4
WP_095501795.1\|2261618_2261795_+	DNA-binding protein	NA	NA	NA	NA
WP_100563312.1\|2261805_2263818_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	A0A2D1GNK9	Pseudomonas_phage	5.4e-112	37.8
WP_097784618.1\|2263888_2264146_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_100563310.1\|2264191_2265109_+	AAA family ATPase	F6MII7	Haemophilus_phage	1.2e-55	38.5
WP_100563308.1\|2265122_2265365_+	toxin PIN	NA	NA	NA	NA
WP_100563306.1\|2265391_2265616_+	hypothetical protein	NA	NA	NA	NA
WP_095503824.1\|2266071_2266758_+	DUF2786 domain-containing protein	A0A2P9JZH4	Alteromonadaceae_phage	1.7e-25	33.9
WP_097784621.1\|2266918_2267242_+	hypothetical protein	NA	NA	NA	NA
WP_097784622.1\|2267238_2267724_+	hypothetical protein	A0A2H4JFV8	uncultured_Caudovirales_phage	3.5e-25	40.6
WP_097784623.1\|2268123_2268648_+	host-nuclease inhibitor protein Gam	F6MIJ0	Haemophilus_phage	1.2e-31	48.8
WP_100563304.1\|2268678_2269560_+	recombination-associated protein RdgC	L7TP07	Pseudomonas_virus	2.0e-42	35.1
WP_095501884.1\|2270236_2270827_+	hypothetical protein	NA	NA	NA	NA
WP_154212904.1\|2270839_2271034_+	hypothetical protein	NA	NA	NA	NA
WP_095503820.1\|2271292_2271823_+	DUF4760 domain-containing protein	NA	NA	NA	NA
WP_097784615.1\|2272033_2272432_+	regulatory protein GemA	A0A0M3LP80	Mannheimia_phage	2.6e-18	40.3
WP_097784614.1\|2272442_2272877_+	mor transcription activator family protein	A0A0M3LRS6	Mannheimia_phage	1.5e-19	38.0
WP_097784613.1\|2273031_2273565_+	N-acetylmuramoyl-L-alanine amidase	U5PZX6	Acinetobacter_phage	2.3e-38	49.7
WP_097784612.1\|2273564_2273774_+	hypothetical protein	NA	NA	NA	NA
WP_097784611.1\|2273776_2274007_+	hypothetical protein	A0A0M4UKB4	Ralstonia_phage	4.2e-05	45.5
WP_097784610.1\|2273984_2274392_+	hypothetical protein	NA	NA	NA	NA
WP_097784609.1\|2274288_2274606_+	hypothetical protein	NA	NA	NA	NA
WP_095503828.1\|2274602_2274944_+	hypothetical protein	NA	NA	NA	NA
WP_095503830.1\|2274943_2275198_+	hypothetical protein	NA	NA	NA	NA
WP_095503829.1\|2275194_2275404_+	hypothetical protein	NA	NA	NA	NA
WP_097784608.1\|2275406_2275913_+	DUF1804 family protein	I6PBD1	Pseudomonas_phage	8.4e-38	48.8
WP_097784607.1\|2276434_2278069_+\|terminase	phage terminase large subunit	B7SDN0	Haemophilus_phage	2.3e-225	71.4
WP_100563300.1\|2278068_2279628_+	DUF935 domain-containing protein	A0A0M3LRU4	Mannheimia_phage	2.2e-190	63.6
WP_097784605.1\|2279614_2280904_+\|head	phage head morphogenesis protein	B7SDN5	Haemophilus_phage	1.8e-113	49.1
WP_070749459.1\|2281014_2281431_+	phage virion morphogenesis protein	B7SDN8	Haemophilus_phage	2.8e-31	50.4
WP_100563298.1\|2281649_2282708_+	hypothetical protein	A0A2D1GNS3	Pseudomonas_phage	7.8e-62	43.1
WP_097784591.1\|2282707_2283616_+\|head	head protein	B7SDP1	Haemophilus_phage	1.8e-94	54.7
WP_095501704.1\|2283680_2284091_+	hypothetical protein	NA	NA	NA	NA
WP_097784592.1\|2284090_2284519_+	DUF1320 domain-containing protein	A0A1B0T6F3	Thiobacimonas_phage	8.5e-07	37.5
WP_097784593.1\|2284502_2285156_+	DUF1834 family protein	NA	NA	NA	NA
WP_097784594.1\|2285142_2285343_+	DUF2635 domain-containing protein	NA	NA	NA	NA
WP_100563295.1\|2285342_2286758_+\|tail	phage tail protein	B7SDP8	Haemophilus_phage	9.0e-122	51.7
WP_097784596.1\|2286823_2287201_+\|tail	phage tail protein	A0A0M3LRV6	Mannheimia_phage	1.4e-29	53.3
WP_097784597.1\|2287204_2287612_+	hypothetical protein	NA	NA	NA	NA
WP_095503837.1\|2287611_2287764_+	TetR family transcriptional regulator	NA	NA	NA	NA
WP_100563293.1\|2287903_2290141_+	PRTRC system protein F	A0A0M3LPB6	Mannheimia_phage	1.5e-22	25.8
WP_097784599.1\|2290137_2291469_+	phage morphogenesis protein	A0A0M3LQ21	Mannheimia_phage	7.3e-73	36.6
WP_097784600.1\|2292663_2293326_+\|plate	phage baseplate assembly protein V	A0A0M3LPA3	Mannheimia_phage	6.4e-46	60.4
WP_097784601.1\|2293459_2293807_+	hypothetical protein	A0A0M3LQK5	Mannheimia_phage	3.3e-33	62.1
WP_100563291.1\|2293820_2294873_+\|plate	baseplate J/gp47 family protein	A0A0M3LQN4	Mannheimia_phage	8.5e-93	52.7
WP_100563289.1\|2294876_2295446_+	YmfQ family protein	F6MIL7	Haemophilus_phage	3.7e-34	43.6
2298092:2298120	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP046027

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection