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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP045948 Salmonella enterica subsp. enterica serovar Typhimurium strain AUSMDU00010530 plasmid pAUSMDU00010530_01, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP045947 Salmonella enterica subsp. enterica serovar Typhimurium strain AUSMDU00010530 chromosome, complete genome 4 crisprs PD-DExK,WYL,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,cas3,cas14j,DEDDh,DinG,RT 2 38 12 0

Results visualization

1. NZ_CP045947
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP045947_1 598292-598392 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP045947_2 947438-948748 TypeI-E I-E
21 spacers
cse2gr11,cas7,cas5,cas6e

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP045947_3 964879-966191 TypeI-E I-E
21 spacers
cas2,cas1,cas6e,cas5,cas7,cse2gr11

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP045947_4 966265-966842 TypeI-E I-E
9 spacers
cas2,cas1,cas6e,cas5,cas7,cse2gr11

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP045947_3 3.1|964907|33|NZ_CP045947|PILER-CR 964907-964939 33 NZ_CP045947.1 1788458-1788490 0 1.0
NZ_CP045947_3 3.21|964908|32|NZ_CP045947|CRISPRCasFinder,CRT 964908-964939 32 NZ_CP045947.1 1788458-1788489 0 1.0

1. spacer 3.1|964907|33|NZ_CP045947|PILER-CR matches to position: 1788458-1788490, mismatch: 0, identity: 1.0 

tcccaccgcgctgattaacgacggactgttaca	CRISPR spacer
tcccaccgcgctgattaacgacggactgttaca	Protospacer
*********************************

2. spacer 3.21|964908|32|NZ_CP045947|CRISPRCasFinder,CRT matches to position: 1788458-1788489, mismatch: 0, identity: 1.0 

cccaccgcgctgattaacgacggactgttaca	CRISPR spacer
cccaccgcgctgattaacgacggactgttaca	Protospacer
********************************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP045947_2 2.17|948447|32|NZ_CP045947|PILER-CR 948447-948478 32 NZ_CP034699 Salmonella enterica subsp. enterica serovar Karamoja strain RSE40 plasmid pRSE40, complete sequence 177960-177991 1 0.969
NZ_CP045947_2 2.17|948447|32|NZ_CP045947|PILER-CR 948447-948478 32 NZ_CP034710 Salmonella enterica subsp. enterica serovar Karamoja strain RSE21 plasmid pRSE21, complete sequence 67131-67162 1 0.969
NZ_CP045947_2 2.27|948444|32|NZ_CP045947|CRISPRCasFinder,CRT 948444-948475 32 NZ_CP034699 Salmonella enterica subsp. enterica serovar Karamoja strain RSE40 plasmid pRSE40, complete sequence 177960-177991 1 0.969
NZ_CP045947_2 2.27|948444|32|NZ_CP045947|CRISPRCasFinder,CRT 948444-948475 32 NZ_CP034710 Salmonella enterica subsp. enterica serovar Karamoja strain RSE21 plasmid pRSE21, complete sequence 67131-67162 1 0.969
NZ_CP045947_3 3.20|966067|33|NZ_CP045947|PILER-CR 966067-966099 33 CP051275 Salmonella phage SW-37, complete genome 24294-24326 1 0.97
NZ_CP045947_3 3.20|966067|33|NZ_CP045947|PILER-CR 966067-966099 33 KC139516 Salmonella phage FSL SP-016, partial genome 43971-44003 1 0.97
NZ_CP045947_3 3.40|966068|32|NZ_CP045947|CRISPRCasFinder,CRT 966068-966099 32 CP051275 Salmonella phage SW-37, complete genome 24295-24326 1 0.969
NZ_CP045947_3 3.40|966068|32|NZ_CP045947|CRISPRCasFinder,CRT 966068-966099 32 KC139516 Salmonella phage FSL SP-016, partial genome 43971-44002 1 0.969
NZ_CP045947_2 2.21|948077|32|NZ_CP045947|CRISPRCasFinder,CRT 948077-948108 32 NZ_CP030204 Salmonella enterica strain SA20083530 plasmid pSA20083530.1, complete sequence 130783-130814 2 0.938
NZ_CP045947_3 3.40|966068|32|NZ_CP045947|CRISPRCasFinder,CRT 966068-966099 32 JQ182729 Enterobacterial phage mEp390, complete genome 23951-23982 3 0.906
NZ_CP045947_2 2.11|948077|35|NZ_CP045947|PILER-CR 948077-948111 35 NZ_CP030204 Salmonella enterica strain SA20083530 plasmid pSA20083530.1, complete sequence 130780-130814 4 0.886
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 NC_008269 Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence 509804-509835 5 0.844
NZ_CP045947_3 3.9|965396|33|NZ_CP045947|PILER-CR 965396-965428 33 NC_008269 Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence 509803-509835 6 0.818
NZ_CP045947_3 3.18|965945|33|NZ_CP045947|PILER-CR 965945-965977 33 MT774487 Salmonella phage MG40, complete genome 21745-21777 6 0.818
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 NZ_CP025013 Rhizobium leguminosarum strain Norway plasmid pRLN1, complete sequence 336397-336428 6 0.812
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 NC_019201 Streptomyces sp. x4(2010) plasmid pTSC1, complete sequence 254-285 6 0.812
NZ_CP045947_3 3.38|965946|32|NZ_CP045947|CRISPRCasFinder,CRT 965946-965977 32 MT774487 Salmonella phage MG40, complete genome 21746-21777 6 0.812
NZ_CP045947_2 2.3|947589|32|NZ_CP045947|PILER-CR,CRISPRCasFinder,CRT 947589-947620 32 NC_011366 Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG202, complete sequence 208454-208485 7 0.781
NZ_CP045947_2 2.3|947589|32|NZ_CP045947|PILER-CR,CRISPRCasFinder,CRT 947589-947620 32 NC_017958 Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence 449563-449594 7 0.781
NZ_CP045947_2 2.3|947589|32|NZ_CP045947|PILER-CR,CRISPRCasFinder,CRT 947589-947620 32 NZ_CP035001 Rhizobium acidisoli strain FH23 plasmid pRapFH23c, complete sequence 167100-167131 7 0.781
NZ_CP045947_3 3.9|965396|33|NZ_CP045947|PILER-CR 965396-965428 33 NZ_CP025013 Rhizobium leguminosarum strain Norway plasmid pRLN1, complete sequence 336396-336428 7 0.788
NZ_CP045947_3 3.9|965396|33|NZ_CP045947|PILER-CR 965396-965428 33 MT758688 Mycobacterium phage CELFI, complete genome 74684-74716 7 0.788
NZ_CP045947_3 3.9|965396|33|NZ_CP045947|PILER-CR 965396-965428 33 MH509446 Gordonia phage DelRio, complete genome 6228-6260 7 0.788
NZ_CP045947_3 3.18|965945|33|NZ_CP045947|PILER-CR 965945-965977 33 JQ288021 Salmonella phage SPN3UB, complete genome 39452-39484 7 0.788
NZ_CP045947_3 3.18|965945|33|NZ_CP045947|PILER-CR 965945-965977 33 MH370364 Salmonella phage S107, complete genome 29958-29990 7 0.788
NZ_CP045947_3 3.18|965945|33|NZ_CP045947|PILER-CR 965945-965977 33 MH370382 Salmonella phage S135, complete genome 29958-29990 7 0.788
NZ_CP045947_3 3.18|965945|33|NZ_CP045947|PILER-CR 965945-965977 33 MH370383 Salmonella phage S137, complete genome 29958-29990 7 0.788
NZ_CP045947_3 3.21|964908|32|NZ_CP045947|CRISPRCasFinder,CRT 964908-964939 32 NZ_CP014127 Pantoea vagans strain FDAARGOS_160 plasmid unnamed2, complete sequence 282797-282828 7 0.781
NZ_CP045947_3 3.21|964908|32|NZ_CP045947|CRISPRCasFinder,CRT 964908-964939 32 NZ_CP028350 Pantoea vagans strain PV989 plasmid pPV989-508, complete sequence 226270-226301 7 0.781
NZ_CP045947_3 3.21|964908|32|NZ_CP045947|CRISPRCasFinder,CRT 964908-964939 32 NC_014258 Pantoea vagans C9-1 plasmid pPag3, complete sequence 345037-345068 7 0.781
NZ_CP045947_3 3.21|964908|32|NZ_CP045947|CRISPRCasFinder,CRT 964908-964939 32 NZ_CP038854 Pantoea vagans strain LMG 24199 plasmid unnamed1, complete sequence 185633-185664 7 0.781
NZ_CP045947_3 3.26|965213|32|NZ_CP045947|CRISPRCasFinder,CRT 965213-965244 32 MN693183 Marine virus AFVG_25M360, complete genome 30035-30066 7 0.781
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 MH509446 Gordonia phage DelRio, complete genome 6223-6254 7 0.781
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 MH509446 Gordonia phage DelRio, complete genome 6229-6260 7 0.781
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 MT758688 Mycobacterium phage CELFI, complete genome 74684-74715 7 0.781
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 NC_006363 Nocardia farcinica IFM 10152 plasmid pNF2, complete sequence 85980-86011 7 0.781
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 NZ_LN868942 Nocardia farcinica strain NCTC11134 plasmid 5, complete sequence 39475-39506 7 0.781
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 NZ_CP031420 Nocardia farcinica strain W6977 plasmid unnamed2, complete sequence 10466-10497 7 0.781
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 NZ_CP029452 Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence 619925-619956 7 0.781
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 NC_008697 Nocardioides sp. JS614 plasmid pNOCA01, complete sequence 117019-117050 7 0.781
NZ_CP045947_3 3.33|965641|32|NZ_CP045947|CRISPRCasFinder,CRT 965641-965672 32 NZ_CP024773 Bacillus thuringiensis LM1212 plasmid pLM2, complete sequence 29048-29079 7 0.781
NZ_CP045947_3 3.33|965641|32|NZ_CP045947|CRISPRCasFinder,CRT 965641-965672 32 NZ_CP041075 Bacillus tropicus strain LM1212-W3 plasmid p2, complete sequence 142294-142325 7 0.781
NZ_CP045947_3 3.35|965763|32|NZ_CP045947|CRISPRCasFinder,CRT 965763-965794 32 NZ_CP054841 Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence 535406-535437 7 0.781
NZ_CP045947_3 3.36|965824|32|NZ_CP045947|CRISPRCasFinder,CRT 965824-965855 32 NZ_CP054841 Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence 535406-535437 7 0.781
NZ_CP045947_3 3.38|965946|32|NZ_CP045947|CRISPRCasFinder,CRT 965946-965977 32 JQ288021 Salmonella phage SPN3UB, complete genome 39452-39483 7 0.781
NZ_CP045947_3 3.38|965946|32|NZ_CP045947|CRISPRCasFinder,CRT 965946-965977 32 MH370364 Salmonella phage S107, complete genome 29959-29990 7 0.781
NZ_CP045947_3 3.38|965946|32|NZ_CP045947|CRISPRCasFinder,CRT 965946-965977 32 MH370382 Salmonella phage S135, complete genome 29959-29990 7 0.781
NZ_CP045947_3 3.38|965946|32|NZ_CP045947|CRISPRCasFinder,CRT 965946-965977 32 MH370383 Salmonella phage S137, complete genome 29959-29990 7 0.781
NZ_CP045947_4 4.1|966294|32|NZ_CP045947|PILER-CR,CRISPRCasFinder,CRT 966294-966325 32 NZ_CP013929 Alteromonas mediterranea strain UM8 plasmid pAMEDUM8_300, complete sequence 188177-188208 7 0.781
NZ_CP045947_4 4.1|966294|32|NZ_CP045947|PILER-CR,CRISPRCasFinder,CRT 966294-966325 32 CP013931 Alteromonas mediterranea strain U10 plasmid pAMED10_300, complete sequence 192938-192969 7 0.781
NZ_CP045947_4 4.1|966294|32|NZ_CP045947|PILER-CR,CRISPRCasFinder,CRT 966294-966325 32 NC_019394 Alteromonas mediterranea DE1 plasmid pAMDE1, complete sequence 188204-188235 7 0.781
NZ_CP045947_2 2.8|947894|32|NZ_CP045947|PILER-CR,CRISPRCasFinder,CRT 947894-947925 32 CP001770 Spirosoma linguale DSM 74 plasmid pSLIN01, complete sequence 145771-145802 8 0.75
NZ_CP045947_2 2.9|947955|32|NZ_CP045947|PILER-CR,CRISPRCasFinder,CRT 947955-947986 32 LQ277707 Sequence 2 from Patent WO2016071503 12422-12453 8 0.75
NZ_CP045947_2 2.9|947955|32|NZ_CP045947|PILER-CR,CRISPRCasFinder,CRT 947955-947986 32 LZ998055 JP 2017534684-A/2: Phage Therapy 12422-12453 8 0.75
NZ_CP045947_2 2.14|948264|32|NZ_CP045947|PILER-CR 948264-948295 32 CP024685 Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-1-490K, complete sequence 135469-135500 8 0.75
NZ_CP045947_2 2.14|948264|32|NZ_CP045947|PILER-CR 948264-948295 32 NZ_CP031801 Klebsiella pneumoniae strain MSB1_8A-sc-2280397 plasmid unnamed1, complete sequence 11654-11685 8 0.75
NZ_CP045947_2 2.24|948261|32|NZ_CP045947|CRISPRCasFinder,CRT 948261-948292 32 CP024685 Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-1-490K, complete sequence 135469-135500 8 0.75
NZ_CP045947_2 2.24|948261|32|NZ_CP045947|CRISPRCasFinder,CRT 948261-948292 32 NZ_CP031801 Klebsiella pneumoniae strain MSB1_8A-sc-2280397 plasmid unnamed1, complete sequence 11654-11685 8 0.75
NZ_CP045947_3 3.1|964907|33|NZ_CP045947|PILER-CR 964907-964939 33 NZ_CP014127 Pantoea vagans strain FDAARGOS_160 plasmid unnamed2, complete sequence 282797-282829 8 0.758
NZ_CP045947_3 3.1|964907|33|NZ_CP045947|PILER-CR 964907-964939 33 NZ_CP028350 Pantoea vagans strain PV989 plasmid pPV989-508, complete sequence 226270-226302 8 0.758
NZ_CP045947_3 3.1|964907|33|NZ_CP045947|PILER-CR 964907-964939 33 NC_014258 Pantoea vagans C9-1 plasmid pPag3, complete sequence 345036-345068 8 0.758
NZ_CP045947_3 3.1|964907|33|NZ_CP045947|PILER-CR 964907-964939 33 NZ_CP038854 Pantoea vagans strain LMG 24199 plasmid unnamed1, complete sequence 185633-185665 8 0.758
NZ_CP045947_3 3.9|965396|33|NZ_CP045947|PILER-CR 965396-965428 33 NC_008269 Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence 509809-509841 8 0.758
NZ_CP045947_3 3.9|965396|33|NZ_CP045947|PILER-CR 965396-965428 33 NC_006363 Nocardia farcinica IFM 10152 plasmid pNF2, complete sequence 85980-86012 8 0.758
NZ_CP045947_3 3.9|965396|33|NZ_CP045947|PILER-CR 965396-965428 33 NZ_LN868942 Nocardia farcinica strain NCTC11134 plasmid 5, complete sequence 39475-39507 8 0.758
NZ_CP045947_3 3.9|965396|33|NZ_CP045947|PILER-CR 965396-965428 33 NZ_CP031420 Nocardia farcinica strain W6977 plasmid unnamed2, complete sequence 10465-10497 8 0.758
NZ_CP045947_3 3.9|965396|33|NZ_CP045947|PILER-CR 965396-965428 33 NZ_CP029452 Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence 619924-619956 8 0.758
NZ_CP045947_3 3.13|965640|33|NZ_CP045947|PILER-CR 965640-965672 33 NZ_CP041075 Bacillus tropicus strain LM1212-W3 plasmid p2, complete sequence 142293-142325 8 0.758
NZ_CP045947_3 3.13|965640|33|NZ_CP045947|PILER-CR 965640-965672 33 NZ_CP024773 Bacillus thuringiensis LM1212 plasmid pLM2, complete sequence 29048-29080 8 0.758
NZ_CP045947_3 3.21|964908|32|NZ_CP045947|CRISPRCasFinder,CRT 964908-964939 32 MK524494 Mycobacterium phage Rabbs, complete genome 19994-20025 8 0.75
NZ_CP045947_3 3.21|964908|32|NZ_CP045947|CRISPRCasFinder,CRT 964908-964939 32 KX641266 Mycobacterium phage Terror, complete genome 20003-20034 8 0.75
NZ_CP045947_3 3.21|964908|32|NZ_CP045947|CRISPRCasFinder,CRT 964908-964939 32 NC_031102 Mycobacterium phage Sneeze, complete genome 19993-20024 8 0.75
NZ_CP045947_3 3.21|964908|32|NZ_CP045947|CRISPRCasFinder,CRT 964908-964939 32 KX641265 Mycobacterium phage Taheera, complete genome 20003-20034 8 0.75
NZ_CP045947_3 3.21|964908|32|NZ_CP045947|CRISPRCasFinder,CRT 964908-964939 32 NC_014811 Mycolicibacterium gilvum Spyr1 plasmid pMSPYR101, complete sequence 50736-50767 8 0.75
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 NZ_CP025013 Rhizobium leguminosarum strain Norway plasmid pRLN1, complete sequence 336385-336416 8 0.75
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 NC_008269 Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence 509810-509841 8 0.75
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 JQ807255 Environmental Halophage eHP-36, partial genome 3413-3444 8 0.75
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 MH509446 Gordonia phage DelRio, complete genome 6235-6266 8 0.75
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 NZ_CP029452 Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence 619931-619962 8 0.75
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 MK359319 Gordonia phage Parada, complete genome 5938-5969 8 0.75
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 MK359319 Gordonia phage Parada, complete genome 5926-5957 8 0.75
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 MK376958 Gordonia phage Brylie, complete genome 5938-5969 8 0.75
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 MK376958 Gordonia phage Brylie, complete genome 5926-5957 8 0.75
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 MH399781 Gordonia phage Nadeem, complete genome 5938-5969 8 0.75
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 MH399781 Gordonia phage Nadeem, complete genome 5926-5957 8 0.75
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 MK967392 Gordonia phage GrandSlam, complete genome 5971-6002 8 0.75
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 MK967392 Gordonia phage GrandSlam, complete genome 5959-5990 8 0.75
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 MK279893 Gordonia phage WheatThin, complete genome 5938-5969 8 0.75
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 MK279893 Gordonia phage WheatThin, complete genome 5926-5957 8 0.75
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 MT701595 Streptomyces phage Shaeky, complete genome 29602-29633 8 0.75
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 NC_031247 Gordonia phage BetterKatz, complete genome 6191-6222 8 0.75
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 NC_031247 Gordonia phage BetterKatz, complete genome 6179-6210 8 0.75
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 MK305885 Gordonia phage Mulch, complete genome 5938-5969 8 0.75
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 MK305885 Gordonia phage Mulch, complete genome 5926-5957 8 0.75
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 NZ_CP014599 Yangia sp. CCB-MM3 plasmid unnamed3, complete sequence 68312-68343 8 0.75
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 MG269973 TM7 phage DolZOral124_53_65, complete genome 38250-38281 8 0.75
NZ_CP045947_3 3.30|965458|32|NZ_CP045947|CRISPRCasFinder,CRT 965458-965489 32 AP013976 Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C7-MedDCM-OCT-S26-C28, *** SEQUENCING IN PROGRESS *** 6246-6277 8 0.75
NZ_CP045947_3 3.30|965458|32|NZ_CP045947|CRISPRCasFinder,CRT 965458-965489 32 JX536274 Uncultured Mediterranean phage MEDS5 group fosmid MedDCM-OCT-S15-C5, complete sequence 3959-3990 8 0.75
NZ_CP045947_3 3.34|965702|32|NZ_CP045947|CRISPRCasFinder,CRT 965702-965733 32 NZ_CP016179 Vibrio breoganii strain FF50 plasmid unnamed1, complete sequence 203354-203385 8 0.75
NZ_CP045947_4 4.2|966355|32|NZ_CP045947|PILER-CR,CRISPRCasFinder,CRT 966355-966386 32 NZ_CP016489 Synechococcus sp. PCC 8807 plasmid unnamed6, complete sequence 8862-8893 8 0.75
NZ_CP045947_4 4.2|966355|32|NZ_CP045947|PILER-CR,CRISPRCasFinder,CRT 966355-966386 32 NZ_CP016476 Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence 151600-151631 8 0.75
NZ_CP045947_4 4.8|966721|32|NZ_CP045947|PILER-CR,CRISPRCasFinder,CRT 966721-966752 32 MN855803 Bacteriophage sp. isolate 108, partial genome 10057-10088 8 0.75
NZ_CP045947_2 2.2|947528|32|NZ_CP045947|PILER-CR,CRISPRCasFinder,CRT 947528-947559 32 MN693046 Marine virus AFVG_25M413, complete genome 4323-4354 9 0.719
NZ_CP045947_2 2.2|947528|32|NZ_CP045947|PILER-CR,CRISPRCasFinder,CRT 947528-947559 32 MN693008 Marine virus AFVG_117M9, complete genome 4316-4347 9 0.719
NZ_CP045947_2 2.3|947589|32|NZ_CP045947|PILER-CR,CRISPRCasFinder,CRT 947589-947620 32 DQ674738 Aeromonas phage phiO18P, complete genome 15707-15738 9 0.719
NZ_CP045947_2 2.3|947589|32|NZ_CP045947|PILER-CR,CRISPRCasFinder,CRT 947589-947620 32 NZ_CP031166 Euzebya sp. DY32-46 plasmid pEDY32-46I, complete sequence 380725-380756 9 0.719
NZ_CP045947_2 2.3|947589|32|NZ_CP045947|PILER-CR,CRISPRCasFinder,CRT 947589-947620 32 NZ_CP022367 Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence 153785-153816 9 0.719
NZ_CP045947_2 2.6|947772|32|NZ_CP045947|PILER-CR,CRISPRCasFinder,CRT 947772-947803 32 MN694645 Marine virus AFVG_250M761, complete genome 31050-31081 9 0.719
NZ_CP045947_2 2.7|947833|32|NZ_CP045947|PILER-CR,CRISPRCasFinder,CRT 947833-947864 32 MN062720 Microbacterium phage FuzzBuster, complete genome 19374-19405 9 0.719
NZ_CP045947_2 2.12|948141|32|NZ_CP045947|PILER-CR 948141-948172 32 NZ_CP051686 Duganella sp. GN2-R2 plasmid unnamed1, complete sequence 45237-45268 9 0.719
NZ_CP045947_2 2.22|948138|32|NZ_CP045947|CRISPRCasFinder,CRT 948138-948169 32 NZ_CP051686 Duganella sp. GN2-R2 plasmid unnamed1, complete sequence 45237-45268 9 0.719
NZ_CP045947_3 3.1|964907|33|NZ_CP045947|PILER-CR 964907-964939 33 MK524494 Mycobacterium phage Rabbs, complete genome 19993-20025 9 0.727
NZ_CP045947_3 3.1|964907|33|NZ_CP045947|PILER-CR 964907-964939 33 KX641266 Mycobacterium phage Terror, complete genome 20002-20034 9 0.727
NZ_CP045947_3 3.1|964907|33|NZ_CP045947|PILER-CR 964907-964939 33 NC_031102 Mycobacterium phage Sneeze, complete genome 19992-20024 9 0.727
NZ_CP045947_3 3.1|964907|33|NZ_CP045947|PILER-CR 964907-964939 33 KX641265 Mycobacterium phage Taheera, complete genome 20002-20034 9 0.727
NZ_CP045947_3 3.9|965396|33|NZ_CP045947|PILER-CR 965396-965428 33 MH509446 Gordonia phage DelRio, complete genome 6234-6266 9 0.727
NZ_CP045947_3 3.9|965396|33|NZ_CP045947|PILER-CR 965396-965428 33 NZ_CP029452 Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence 619930-619962 9 0.727
NZ_CP045947_3 3.9|965396|33|NZ_CP045947|PILER-CR 965396-965428 33 MK359319 Gordonia phage Parada, complete genome 5937-5969 9 0.727
NZ_CP045947_3 3.9|965396|33|NZ_CP045947|PILER-CR 965396-965428 33 MK376958 Gordonia phage Brylie, complete genome 5937-5969 9 0.727
NZ_CP045947_3 3.9|965396|33|NZ_CP045947|PILER-CR 965396-965428 33 MH399781 Gordonia phage Nadeem, complete genome 5937-5969 9 0.727
NZ_CP045947_3 3.9|965396|33|NZ_CP045947|PILER-CR 965396-965428 33 MK967392 Gordonia phage GrandSlam, complete genome 5970-6002 9 0.727
NZ_CP045947_3 3.9|965396|33|NZ_CP045947|PILER-CR 965396-965428 33 MK279893 Gordonia phage WheatThin, complete genome 5937-5969 9 0.727
NZ_CP045947_3 3.9|965396|33|NZ_CP045947|PILER-CR 965396-965428 33 MT701595 Streptomyces phage Shaeky, complete genome 29601-29633 9 0.727
NZ_CP045947_3 3.9|965396|33|NZ_CP045947|PILER-CR 965396-965428 33 NC_031247 Gordonia phage BetterKatz, complete genome 6190-6222 9 0.727
NZ_CP045947_3 3.9|965396|33|NZ_CP045947|PILER-CR 965396-965428 33 MK305885 Gordonia phage Mulch, complete genome 5937-5969 9 0.727
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 NZ_CP028537 Enterobacter hormaechei strain SCEH020042 plasmid pQnrB4_020042, complete sequence 45644-45675 9 0.719
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 NZ_AP023191 Escherichia coli strain TUM18530 plasmid pMTY18530-1_lncHI2, complete sequence 47035-47066 9 0.719
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 MN539017 Salmonella sp. strain PJM1 plasmid pPJM1, complete sequence 71637-71668 9 0.719
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 MN539018 Salmonella sp. strain OYZ4 plasmid pOYZ4, complete sequence 121312-121343 9 0.719
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 MT077888 Escherichia coli plasmid p65, complete sequence 47129-47160 9 0.719
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 NC_009838 Escherichia coli APEC O1 plasmid pAPEC-O1-R, complete sequence 46533-46564 9 0.719
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 NZ_CP044306 Escherichia coli strain C27A plasmid pC27A-CTX-M-55, complete sequence 130757-130788 9 0.719
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 NZ_CP039170 Salmonella enterica subsp. enterica serovar Goldcoast strain Sal-5364 plasmid pSal-5364, complete sequence 69620-69651 9 0.719
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 CP048299 Salmonella enterica subsp. enterica serovar Schwarzengrund strain WAPHL_SAL-A00527 plasmid pN1566-2, complete sequence 195977-196008 9 0.719
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 CP048303 Salmonella enterica subsp. enterica serovar Schwarzengrund strain WAPHL-SAL-A00375 plasmid p28945-2, complete sequence 41265-41296 9 0.719
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 NZ_CP037959 Salmonella enterica subsp. enterica serovar Goldcoast strain R18.0877 plasmid pR18.0877_278k, complete sequence 45076-45107 9 0.719
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 NZ_CP039861 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014880 plasmid p16-6773.1, complete sequence 239710-239741 9 0.719
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 NZ_CP048776 Salmonella enterica subsp. enterica serovar Agona strain SG17-135 plasmid pSG17-135-HI2, complete sequence 45076-45107 9 0.719
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 NC_019114 Salmonella enterica subsp. enterica serovar Heidelberg plasmid pSH111_227, complete sequence 43326-43357 9 0.719
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 NZ_AP023198 Escherichia coli strain TUM18780 plasmid pMTY18780-1_lncHI2, complete sequence 47035-47066 9 0.719
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 NZ_CP043223 Salmonella enterica subsp. enterica serovar Bredeney strain SA20114778WT plasmid pET1.1-IncH, complete sequence 5926-5957 9 0.719
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 NZ_CP043223 Salmonella enterica subsp. enterica serovar Bredeney strain SA20114778WT plasmid pET1.1-IncH, complete sequence 240147-240178 9 0.719
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 NZ_CP027411 Salmonella enterica strain FDAARGOS_319 plasmid unnamed, complete sequence 73185-73216 9 0.719
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 JQ807227 Environmental Halophage eHP-6, partial genome 2886-2917 9 0.719
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 NZ_CP029452 Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence 619919-619950 9 0.719
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 NC_019201 Streptomyces sp. x4(2010) plasmid pTSC1, complete sequence 248-279 9 0.719
NZ_CP045947_3 3.31|965519|32|NZ_CP045947|CRISPRCasFinder,CRT 965519-965550 32 MT162468 Synechococcus phage S-H25, complete genome 69929-69960 9 0.719
NZ_CP045947_3 3.38|965946|32|NZ_CP045947|CRISPRCasFinder,CRT 965946-965977 32 MK448228 Klebsiella phage ST15-VIM1phi2.1, complete genome 32866-32897 9 0.719
NZ_CP045947_2 2.7|947833|32|NZ_CP045947|PILER-CR,CRISPRCasFinder,CRT 947833-947864 32 NZ_CP019257 Escherichia coli strain 13TMH22 plasmid p13TMH22-1, complete sequence 20006-20037 10 0.688
NZ_CP045947_2 2.7|947833|32|NZ_CP045947|PILER-CR,CRISPRCasFinder,CRT 947833-947864 32 NZ_CP019274 Escherichia coli strain 13P477T plasmid p13P477T-1, complete sequence 9024-9055 10 0.688
NZ_CP045947_2 2.7|947833|32|NZ_CP045947|PILER-CR,CRISPRCasFinder,CRT 947833-947864 32 NZ_CP019275 Escherichia coli strain 13P477T plasmid p13P477T-2, complete sequence 27130-27161 10 0.688
NZ_CP045947_2 2.7|947833|32|NZ_CP045947|PILER-CR,CRISPRCasFinder,CRT 947833-947864 32 NZ_CP019279 Escherichia coli strain 13P477T plasmid p13P477T-6, complete sequence 19363-19394 10 0.688
NZ_CP045947_2 2.7|947833|32|NZ_CP045947|PILER-CR,CRISPRCasFinder,CRT 947833-947864 32 NZ_CP019246 Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence 23427-23458 10 0.688
NZ_CP045947_2 2.7|947833|32|NZ_CP045947|PILER-CR,CRISPRCasFinder,CRT 947833-947864 32 NC_049342 Escherichia phage 500465-1, complete genome 24342-24373 10 0.688
NZ_CP045947_2 2.7|947833|32|NZ_CP045947|PILER-CR,CRISPRCasFinder,CRT 947833-947864 32 KY271398 Klebsiella phage 4 LV-2017, complete genome 28240-28271 10 0.688
NZ_CP045947_2 2.7|947833|32|NZ_CP045947|PILER-CR,CRISPRCasFinder,CRT 947833-947864 32 CP025900 Escherichia phage sp., complete genome 24342-24373 10 0.688
NZ_CP045947_2 2.18|948508|32|NZ_CP045947|PILER-CR 948508-948539 32 NZ_CP044072 Pseudomonas oryzihabitans strain FDAARGOS_657 plasmid unnamed1, complete sequence 99817-99848 10 0.688
NZ_CP045947_2 2.28|948505|32|NZ_CP045947|CRISPRCasFinder,CRT 948505-948536 32 NZ_CP044072 Pseudomonas oryzihabitans strain FDAARGOS_657 plasmid unnamed1, complete sequence 99817-99848 10 0.688
NZ_CP045947_2 2.31|948688|32|NZ_CP045947|CRISPRCasFinder,CRT 948688-948719 32 NZ_CP054615 Azospirillum oryzae strain KACC 14407 plasmid unnamed1, complete sequence 146919-146950 10 0.688
NZ_CP045947_3 3.9|965396|33|NZ_CP045947|PILER-CR 965396-965428 33 NZ_CP045074 Paracoccus kondratievae strain BJQ0001 plasmid unnamed1, complete sequence 452409-452441 10 0.697
NZ_CP045947_3 3.10|965457|33|NZ_CP045947|PILER-CR 965457-965489 33 NZ_CP020539 Sphingobium herbicidovorans strain MH plasmid pMSHV, complete sequence 53255-53287 10 0.697
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 NZ_KY689633 Escherichia coli strain 100R plasmid p100R, complete sequence 90192-90223 10 0.688
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 NZ_KY689632 Escherichia coli strain 19-M12 plasmid p19M12, complete sequence 93444-93475 10 0.688
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 NZ_CP045446 Salmonella enterica subsp. enterica serovar Schwarzengrund strain 9355 plasmid p280_9355, complete sequence 47441-47472 10 0.688
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 NZ_KU743384 Escherichia coli strain SA26 plasmid pSA26-MCR-1, complete sequence 181822-181853 10 0.688
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 NZ_KU254578 Escherichia coli strain YD786 plasmid pYD786-1, complete sequence 164955-164986 10 0.688
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 NZ_KX129782 Escherichia coli strain S38 plasmid pS38, complete sequence 46429-46460 10 0.688
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 NZ_CP015833 Escherichia coli O157 strain 180-PT54 plasmid unnamed, complete sequence 45081-45112 10 0.688
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 LT221036 Yersinia pseudotuberculosis strain Yps.F1, plasmid pYps.F1 complete sequence 41890-41921 10 0.688
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 CP019195 Salmonella enterica subsp. enterica serovar Senftenberg str. ATCC 43845 plasmid pATCC43845, complete sequence 98508-98539 10 0.688
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 NZ_CP045449 Salmonella enterica subsp. enterica serovar Schwarzengrund strain 12888 plasmid p280_12888, complete sequence 47440-47471 10 0.688
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 NZ_CP015096 Pelagibaca abyssi strain JLT2014 plasmid pPABY8, complete sequence 24746-24777 10 0.688
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 MN732922 Escherichia coli strain 49K plasmid unnamed, complete sequence 70876-70907 10 0.688
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 NZ_CP020493 Salmonella enterica subsp. enterica strain 08-00436 plasmid pSE08-00436-1, complete sequence 47996-48027 10 0.688
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 CP031284 Escherichia fergusonii strain 40A plasmid p280_40A, complete sequence 60929-60960 10 0.688
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 CP042895 Escherichia coli strain CFSAN061772 plasmid pCFSAN061772_02, complete sequence 106230-106261 10 0.688
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 NZ_CP022735 Escherichia coli strain SA186 plasmid pSA186_MCR1, complete sequence 61639-61670 10 0.688
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 CP042898 Escherichia coli strain CFSAN061771 plasmid pCFSAN061771_02, complete sequence 125697-125728 10 0.688
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 NZ_CP022165 Escherichia coli strain M160133 plasmid pM160133_p1, complete sequence 45079-45110 10 0.688
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 NZ_CP012931 Salmonella enterica subsp. enterica serovar Heidelberg strain N13-01290 plasmid pN13-01290_23, complete sequence 119619-119650 10 0.688
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 NZ_CP023143 Escherichia coli strain CFSAN061770 plasmid pEGY1-MCR-1, complete sequence 136443-136474 10 0.688
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 NZ_CP026936 Escherichia coli strain CFS3292 plasmid pCFS3292-1, complete sequence 46428-46459 10 0.688
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 NZ_CP025402 Escherichia coli strain MS8345 plasmid pMS8345A, complete sequence 182643-182674 10 0.688
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 NZ_CP026933 Escherichia coli strain CFS3273 plasmid pCFS3273-1, complete sequence 46278-46309 10 0.688
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 NZ_MH924589 Escherichia coli strain RDB9 plasmid pRDB9, complete sequence 197026-197057 10 0.688
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 NZ_MH208235 Escherichia coli strain APECA2 plasmid pJMA2, complete sequence 166860-166891 10 0.688
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 NZ_MK169211 Escherichia coli strain DUK14-2 plasmid pMOO-32, complete sequence 46091-46122 10 0.688
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 NZ_CP016838 Salmonella enterica subsp. enterica serovar Senftenberg strain 775W (ATCC 43845) plasmid pSSE-ATCC-43845, complete sequence 46820-46851 10 0.688
NZ_CP045947_3 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT 965397-965428 32 NZ_CP045074 Paracoccus kondratievae strain BJQ0001 plasmid unnamed1, complete sequence 452410-452441 10 0.688
NZ_CP045947_3 3.30|965458|32|NZ_CP045947|CRISPRCasFinder,CRT 965458-965489 32 NZ_CP020539 Sphingobium herbicidovorans strain MH plasmid pMSHV, complete sequence 53255-53286 10 0.688
NZ_CP045947_3 3.31|965519|32|NZ_CP045947|CRISPRCasFinder,CRT 965519-965550 32 LN681539 Clostridium phage phiCD505, complete genome 8933-8964 10 0.688
NZ_CP045947_3 3.31|965519|32|NZ_CP045947|CRISPRCasFinder,CRT 965519-965550 32 JX145341 Clostridium phage phiMMP02, complete genome 8932-8963 10 0.688
NZ_CP045947_3 3.31|965519|32|NZ_CP045947|CRISPRCasFinder,CRT 965519-965550 32 NC_011398 Clostridium phage phiCD27, complete genome 8924-8955 10 0.688
NZ_CP045947_3 3.31|965519|32|NZ_CP045947|CRISPRCasFinder,CRT 965519-965550 32 NC_048642 Clostridium phage CDKM9, complete genome 8871-8902 10 0.688
NZ_CP045947_3 3.31|965519|32|NZ_CP045947|CRISPRCasFinder,CRT 965519-965550 32 KX228400 Clostridium phage CDKM15, complete genome 9066-9097 10 0.688
NZ_CP045947_3 3.40|966068|32|NZ_CP045947|CRISPRCasFinder,CRT 966068-966099 32 NZ_AP022571 Mycolicibacterium poriferae strain JCM 12603 plasmid pJCM12603, complete sequence 153476-153507 10 0.688
NZ_CP045947_4 4.9|966782|32|NZ_CP045947|CRISPRCasFinder,CRT 966782-966813 32 NC_016113 Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence 1151729-1151760 10 0.688
NZ_CP045947_4 4.9|966782|32|NZ_CP045947|CRISPRCasFinder,CRT 966782-966813 32 NC_017585 Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence 661429-661460 10 0.688
NZ_CP045947_2 2.3|947589|32|NZ_CP045947|PILER-CR,CRISPRCasFinder,CRT 947589-947620 32 NZ_CP054036 Rhizobium sp. JKLM13E plasmid pPR13E05, complete sequence 234768-234799 11 0.656
NZ_CP045947_2 2.3|947589|32|NZ_CP045947|PILER-CR,CRISPRCasFinder,CRT 947589-947620 32 NZ_CP022568 Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK04, complete sequence 299431-299462 11 0.656
NZ_CP045947_3 3.9|965396|33|NZ_CP045947|PILER-CR 965396-965428 33 NC_019201 Streptomyces sp. x4(2010) plasmid pTSC1, complete sequence 248-280 11 0.667

1. spacer 2.17|948447|32|NZ_CP045947|PILER-CR matches to NZ_CP034699 (Salmonella enterica subsp. enterica serovar Karamoja strain RSE40 plasmid pRSE40, complete sequence) position: , mismatch: 1, identity: 0.969 

ggatatgtgaagttcaggtagcccattacgca	CRISPR spacer
ggatatgtgaagttcaggtagcccactacgca	Protospacer
*************************.******

2. spacer 2.17|948447|32|NZ_CP045947|PILER-CR matches to NZ_CP034710 (Salmonella enterica subsp. enterica serovar Karamoja strain RSE21 plasmid pRSE21, complete sequence) position: , mismatch: 1, identity: 0.969 

ggatatgtgaagttcaggtagcccattacgca	CRISPR spacer
ggatatgtgaagttcaggtagcccactacgca	Protospacer
*************************.******

3. spacer 2.27|948444|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NZ_CP034699 (Salmonella enterica subsp. enterica serovar Karamoja strain RSE40 plasmid pRSE40, complete sequence) position: , mismatch: 1, identity: 0.969 

ggatatgtgaagttcaggtagcccattacgca	CRISPR spacer
ggatatgtgaagttcaggtagcccactacgca	Protospacer
*************************.******

4. spacer 2.27|948444|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NZ_CP034710 (Salmonella enterica subsp. enterica serovar Karamoja strain RSE21 plasmid pRSE21, complete sequence) position: , mismatch: 1, identity: 0.969 

ggatatgtgaagttcaggtagcccattacgca	CRISPR spacer
ggatatgtgaagttcaggtagcccactacgca	Protospacer
*************************.******

5. spacer 3.20|966067|33|NZ_CP045947|PILER-CR matches to CP051275 (Salmonella phage SW-37, complete genome) position: , mismatch: 1, identity: 0.97 

gccacgttcggcgatgttggccccatcggtcca	CRISPR spacer
gccacgttcggcgatgttggccccatcggtccg	Protospacer
********************************.

6. spacer 3.20|966067|33|NZ_CP045947|PILER-CR matches to KC139516 (Salmonella phage FSL SP-016, partial genome) position: , mismatch: 1, identity: 0.97 

gccacgttcggcgatgttggccccatcggtcca	CRISPR spacer
gccacattcggcgatgttggccccatcggtcca	Protospacer
*****.***************************

7. spacer 3.40|966068|32|NZ_CP045947|CRISPRCasFinder,CRT matches to CP051275 (Salmonella phage SW-37, complete genome) position: , mismatch: 1, identity: 0.969 

ccacgttcggcgatgttggccccatcggtcca	CRISPR spacer
ccacgttcggcgatgttggccccatcggtccg	Protospacer
*******************************.

8. spacer 3.40|966068|32|NZ_CP045947|CRISPRCasFinder,CRT matches to KC139516 (Salmonella phage FSL SP-016, partial genome) position: , mismatch: 1, identity: 0.969 

ccacgttcggcgatgttggccccatcggtcca	CRISPR spacer
ccacattcggcgatgttggccccatcggtcca	Protospacer
****.***************************

9. spacer 2.21|948077|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NZ_CP030204 (Salmonella enterica strain SA20083530 plasmid pSA20083530.1, complete sequence) position: , mismatch: 2, identity: 0.938 

aaacgaaagaggctatgcggttgtttatcggt	CRISPR spacer
aaacgaaagaggccatgcgattgtttatcggt	Protospacer
*************.*****.************

10. spacer 3.40|966068|32|NZ_CP045947|CRISPRCasFinder,CRT matches to JQ182729 (Enterobacterial phage mEp390, complete genome) position: , mismatch: 3, identity: 0.906 

ccacgttcggcgatgttggccccatcggtcca	CRISPR spacer
ctacgttcggtgatgttggccccataggtcca	Protospacer
*.********.************** ******

11. spacer 2.11|948077|35|NZ_CP045947|PILER-CR matches to NZ_CP030204 (Salmonella enterica strain SA20083530 plasmid pSA20083530.1, complete sequence) position: , mismatch: 4, identity: 0.886 

tcgaaacgaaagaggctatgcggttgtttatcggt	CRISPR spacer
atgaaacgaaagaggccatgcgattgtttatcggt	Protospacer
 .**************.*****.************

12. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NC_008269 (Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence) position: , mismatch: 5, identity: 0.844 

cgtcactaccgagaccgagaccgagaccgaga	CRISPR spacer
ccagacaaccgagaccgagaccgagacccaga	Protospacer
*   ** ********************* ***

13. spacer 3.9|965396|33|NZ_CP045947|PILER-CR matches to NC_008269 (Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence) position: , mismatch: 6, identity: 0.818 

gcgtcactaccgagaccgagaccgagaccgaga	CRISPR spacer
cccagacaaccgagaccgagaccgagacccaga	Protospacer
 *   ** ********************* ***

14. spacer 3.18|965945|33|NZ_CP045947|PILER-CR matches to MT774487 (Salmonella phage MG40, complete genome) position: , mismatch: 6, identity: 0.818 

ggtcgttcatcaggcactaccggcactttctgg	CRISPR spacer
gccatttcatcaggcactaccggcactggctgg	Protospacer
* .  **********************  ****

15. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NZ_CP025013 (Rhizobium leguminosarum strain Norway plasmid pRLN1, complete sequence) position: , mismatch: 6, identity: 0.812 

cgtcactaccgagaccgagaccgagaccgaga	CRISPR spacer
gaccgagaccgagaccgagaccgagaccgaga	Protospacer
 ..*.  *************************

16. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NC_019201 (Streptomyces sp. x4(2010) plasmid pTSC1, complete sequence) position: , mismatch: 6, identity: 0.812 

cgtcactac-cgagaccgagaccgagaccgaga	CRISPR spacer
-gcccccacgcgagactgagaccgagactgaga	Protospacer
 *.* *.** ******.***********.****

17. spacer 3.38|965946|32|NZ_CP045947|CRISPRCasFinder,CRT matches to MT774487 (Salmonella phage MG40, complete genome) position: , mismatch: 6, identity: 0.812 

gtcgttcatcaggcactaccggcactttctgg	CRISPR spacer
ccatttcatcaggcactaccggcactggctgg	Protospacer
 .  **********************  ****

18. spacer 2.3|947589|32|NZ_CP045947|PILER-CR,CRISPRCasFinder,CRT matches to NC_011366 (Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG202, complete sequence) position: , mismatch: 7, identity: 0.781 

ccggcatcagcgccgatccgttcatagtgccc---	CRISPR spacer
tcggcaccagcgccgatccggtca---tgctcgaa	Protospacer
.*****.************* ***   ***.*

19. spacer 2.3|947589|32|NZ_CP045947|PILER-CR,CRISPRCasFinder,CRT matches to NC_017958 (Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence) position: , mismatch: 7, identity: 0.781 

ccggcatcagcgccgatccgttcatagtgccc	CRISPR spacer
ccggcatcaccgccgatcctttcaccgccgcc	Protospacer
********* ********* ****. *.  **

20. spacer 2.3|947589|32|NZ_CP045947|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035001 (Rhizobium acidisoli strain FH23 plasmid pRapFH23c, complete sequence) position: , mismatch: 7, identity: 0.781 

ccggcatcagcgccgatccgttcatagtgccc---	CRISPR spacer
tcggcaccagcgccgatccggtca---tgctcgaa	Protospacer
.*****.************* ***   ***.*

21. spacer 3.9|965396|33|NZ_CP045947|PILER-CR matches to NZ_CP025013 (Rhizobium leguminosarum strain Norway plasmid pRLN1, complete sequence) position: , mismatch: 7, identity: 0.788 

gcgtcactaccgagaccgagaccgagaccgaga	CRISPR spacer
agaccgagaccgagaccgagaccgagaccgaga	Protospacer
. ..*.  *************************

22. spacer 3.9|965396|33|NZ_CP045947|PILER-CR matches to MT758688 (Mycobacterium phage CELFI, complete genome) position: , mismatch: 7, identity: 0.788 

gcgtcactaccgagaccgagaccgagaccgaga	CRISPR spacer
gcaacgggaccgagaccgggaccgggaccgaga	Protospacer
**. *.  **********.*****.********

23. spacer 3.9|965396|33|NZ_CP045947|PILER-CR matches to MH509446 (Gordonia phage DelRio, complete genome) position: , mismatch: 7, identity: 0.788 

gcgtcactaccgagaccgagaccgagaccgaga	CRISPR spacer
gcaccgagaccgcgaccgagaccgaaaccgaga	Protospacer
**..*.  **** ************.*******

24. spacer 3.18|965945|33|NZ_CP045947|PILER-CR matches to JQ288021 (Salmonella phage SPN3UB, complete genome) position: , mismatch: 7, identity: 0.788 

ggtcgttcatcaggcactaccggcactttctgg	CRISPR spacer
gccatttcatcaggcactaccggcactggctgc	Protospacer
* .  **********************  ***

25. spacer 3.18|965945|33|NZ_CP045947|PILER-CR matches to MH370364 (Salmonella phage S107, complete genome) position: , mismatch: 7, identity: 0.788 

ggtcgttcatcaggcactaccggcactttctgg	CRISPR spacer
gccatttcatcaggcactaccggcactggctgc	Protospacer
* .  **********************  ***

26. spacer 3.18|965945|33|NZ_CP045947|PILER-CR matches to MH370382 (Salmonella phage S135, complete genome) position: , mismatch: 7, identity: 0.788 

ggtcgttcatcaggcactaccggcactttctgg	CRISPR spacer
gccatttcatcaggcactaccggcactggctgc	Protospacer
* .  **********************  ***

27. spacer 3.18|965945|33|NZ_CP045947|PILER-CR matches to MH370383 (Salmonella phage S137, complete genome) position: , mismatch: 7, identity: 0.788 

ggtcgttcatcaggcactaccggcactttctgg	CRISPR spacer
gccatttcatcaggcactaccggcactggctgc	Protospacer
* .  **********************  ***

28. spacer 3.21|964908|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NZ_CP014127 (Pantoea vagans strain FDAARGOS_160 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781 

cccaccgcgctgattaacgacggactgttaca	CRISPR spacer
ggcaccgggctgattaacgccggactgtatcg	Protospacer
  ***** *********** ********  *.

29. spacer 3.21|964908|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NZ_CP028350 (Pantoea vagans strain PV989 plasmid pPV989-508, complete sequence) position: , mismatch: 7, identity: 0.781 

cccaccgcgctgattaacgacggactgttaca	CRISPR spacer
ggcaccgggctgattaacgccggactgtatcg	Protospacer
  ***** *********** ********  *.

30. spacer 3.21|964908|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NC_014258 (Pantoea vagans C9-1 plasmid pPag3, complete sequence) position: , mismatch: 7, identity: 0.781 

cccaccgcgctgattaacgacggactgttaca	CRISPR spacer
ggcaccgggctgattaacgccggactgtatcg	Protospacer
  ***** *********** ********  *.

31. spacer 3.21|964908|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NZ_CP038854 (Pantoea vagans strain LMG 24199 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781 

cccaccgcgctgattaacgacggactgttaca	CRISPR spacer
ggcaccgggctgattaacgccggactgtatcg	Protospacer
  ***** *********** ********  *.

32. spacer 3.26|965213|32|NZ_CP045947|CRISPRCasFinder,CRT matches to MN693183 (Marine virus AFVG_25M360, complete genome) position: , mismatch: 7, identity: 0.781 

ccattattcaaccctccaggctc-gcgccggct	CRISPR spacer
ccattattcaaccctccaaactctgaatccgc-	Protospacer
******************..*** * ..* **

33. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to MH509446 (Gordonia phage DelRio, complete genome) position: , mismatch: 7, identity: 0.781 

cgtcactaccgagaccgagaccgagaccgaga	CRISPR spacer
cgagggcaccgagaccgcgaccgagaccgaaa	Protospacer
**  . .********** ************.*

34. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to MH509446 (Gordonia phage DelRio, complete genome) position: , mismatch: 7, identity: 0.781 

cgtcactaccgagaccgagaccgagaccgaga	CRISPR spacer
caccgagaccgcgaccgagaccgaaaccgaga	Protospacer
*..*.  **** ************.*******

35. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to MT758688 (Mycobacterium phage CELFI, complete genome) position: , mismatch: 7, identity: 0.781 

cgtcactaccgagaccgagaccgagaccgaga	CRISPR spacer
caacgggaccgagaccgggaccgggaccgaga	Protospacer
*. *.  **********.*****.********

36. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NC_006363 (Nocardia farcinica IFM 10152 plasmid pNF2, complete sequence) position: , mismatch: 7, identity: 0.781 

cgtcactaccgagaccgagaccgagaccgaga	CRISPR spacer
catccgcaccgagaccgcgaccgagatcgagc	Protospacer
*.**  .********** ********.****

37. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NZ_LN868942 (Nocardia farcinica strain NCTC11134 plasmid 5, complete sequence) position: , mismatch: 7, identity: 0.781 

cgtcactaccgagaccgagaccgagaccgaga	CRISPR spacer
catccgcaccgagaccgcgaccgagatcgagc	Protospacer
*.**  .********** ********.****

38. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NZ_CP031420 (Nocardia farcinica strain W6977 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781 

cgtcactaccgagaccgagaccgagaccgaga	CRISPR spacer
catccgcaccgagaccgcgaccgagatcgagc	Protospacer
*.**  .********** ********.****

39. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 7, identity: 0.781 

cgtcactaccgagaccgagaccgagaccgaga	CRISPR spacer
cgccgaggccgagaccgaggccgaggccgaga	Protospacer
**.*.  .***********.*****.******

40. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NC_008697 (Nocardioides sp. JS614 plasmid pNOCA01, complete sequence) position: , mismatch: 7, identity: 0.781 

cgtcactaccgagaccgagaccgagaccgaga	CRISPR spacer
cgccgccgccgagaccgaggccgaggccgagg	Protospacer
**.*.*..***********.*****.*****.

41. spacer 3.33|965641|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NZ_CP024773 (Bacillus thuringiensis LM1212 plasmid pLM2, complete sequence) position: , mismatch: 7, identity: 0.781 

ttacgtgtttattcatctgttgcattagattc	CRISPR spacer
attggtgtttcttcatctattgcattagaagc	Protospacer
 *  ****** *******.**********  *

42. spacer 3.33|965641|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NZ_CP041075 (Bacillus tropicus strain LM1212-W3 plasmid p2, complete sequence) position: , mismatch: 7, identity: 0.781 

ttacgtgtttattcatctgttgcattagattc	CRISPR spacer
attggtgtttcttcatctattgcattagaagc	Protospacer
 *  ****** *******.**********  *

43. spacer 3.35|965763|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NZ_CP054841 (Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781 

acgccccgaatgtgtttgcctcgcccgctgcc	CRISPR spacer
gcgacctgaatgtgtttgcctcgcgccgtggc	Protospacer
.** **.***************** *  ** *

44. spacer 3.36|965824|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NZ_CP054841 (Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781 

acgccccgaatgtgtttgcctcgcccgctgcc	CRISPR spacer
gcgacctgaatgtgtttgcctcgcgccgtggc	Protospacer
.** **.***************** *  ** *

45. spacer 3.38|965946|32|NZ_CP045947|CRISPRCasFinder,CRT matches to JQ288021 (Salmonella phage SPN3UB, complete genome) position: , mismatch: 7, identity: 0.781 

gtcgttcatcaggcactaccggcactttctgg	CRISPR spacer
ccatttcatcaggcactaccggcactggctgc	Protospacer
 .  **********************  ***

46. spacer 3.38|965946|32|NZ_CP045947|CRISPRCasFinder,CRT matches to MH370364 (Salmonella phage S107, complete genome) position: , mismatch: 7, identity: 0.781 

gtcgttcatcaggcactaccggcactttctgg	CRISPR spacer
ccatttcatcaggcactaccggcactggctgc	Protospacer
 .  **********************  ***

47. spacer 3.38|965946|32|NZ_CP045947|CRISPRCasFinder,CRT matches to MH370382 (Salmonella phage S135, complete genome) position: , mismatch: 7, identity: 0.781 

gtcgttcatcaggcactaccggcactttctgg	CRISPR spacer
ccatttcatcaggcactaccggcactggctgc	Protospacer
 .  **********************  ***

48. spacer 3.38|965946|32|NZ_CP045947|CRISPRCasFinder,CRT matches to MH370383 (Salmonella phage S137, complete genome) position: , mismatch: 7, identity: 0.781 

gtcgttcatcaggcactaccggcactttctgg	CRISPR spacer
ccatttcatcaggcactaccggcactggctgc	Protospacer
 .  **********************  ***

49. spacer 4.1|966294|32|NZ_CP045947|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013929 (Alteromonas mediterranea strain UM8 plasmid pAMEDUM8_300, complete sequence) position: , mismatch: 7, identity: 0.781 

agccgtttccgctaaatacccc--cgcagtgatt	CRISPR spacer
ccccgatttcgctaaatacccccgcgcagcga--	Protospacer
  *** **.*************  *****.**

50. spacer 4.1|966294|32|NZ_CP045947|PILER-CR,CRISPRCasFinder,CRT matches to CP013931 (Alteromonas mediterranea strain U10 plasmid pAMED10_300, complete sequence) position: , mismatch: 7, identity: 0.781 

agccgtttccgctaaatacccc--cgcagtgatt	CRISPR spacer
ccccgatttcgctaaatacccccgcgcagcga--	Protospacer
  *** **.*************  *****.**

51. spacer 4.1|966294|32|NZ_CP045947|PILER-CR,CRISPRCasFinder,CRT matches to NC_019394 (Alteromonas mediterranea DE1 plasmid pAMDE1, complete sequence) position: , mismatch: 7, identity: 0.781 

agccgtttccgctaaatacccc--cgcagtgatt	CRISPR spacer
ccccgatttcgctaaatacccccgcgcagcga--	Protospacer
  *** **.*************  *****.**

52. spacer 2.8|947894|32|NZ_CP045947|PILER-CR,CRISPRCasFinder,CRT matches to CP001770 (Spirosoma linguale DSM 74 plasmid pSLIN01, complete sequence) position: , mismatch: 8, identity: 0.75 

cggaggatggaatatttccgaggctggcgatt	CRISPR spacer
tgggagatggaatacttccggggctggcaacc	Protospacer
.**..*********.*****.*******.*..

53. spacer 2.9|947955|32|NZ_CP045947|PILER-CR,CRISPRCasFinder,CRT matches to LQ277707 (Sequence 2 from Patent WO2016071503) position: , mismatch: 8, identity: 0.75 

atgccggaacgctgatggcgtttgacatgagc----	CRISPR spacer
ttgccggaacgctattggcgtttg----cagccttt	Protospacer
 ************. *********     ***

54. spacer 2.9|947955|32|NZ_CP045947|PILER-CR,CRISPRCasFinder,CRT matches to LZ998055 (JP 2017534684-A/2: Phage Therapy) position: , mismatch: 8, identity: 0.75 

atgccggaacgctgatggcgtttgacatgagc----	CRISPR spacer
ttgccggaacgctattggcgtttg----cagccttt	Protospacer
 ************. *********     ***

55. spacer 2.14|948264|32|NZ_CP045947|PILER-CR matches to CP024685 (Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-1-490K, complete sequence) position: , mismatch: 8, identity: 0.75 

cgtcactttctgacattttattcagttcgtta	CRISPR spacer
attcactatcagacattttattcagttctgcc	Protospacer
  ***** ** *****************  .

56. spacer 2.14|948264|32|NZ_CP045947|PILER-CR matches to NZ_CP031801 (Klebsiella pneumoniae strain MSB1_8A-sc-2280397 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75 

cgtcactttctgacattttattcagttcgtta	CRISPR spacer
cgcgcgtgtctgacattgtattcagttcattt	Protospacer
**.   * ********* **********.**

57. spacer 2.24|948261|32|NZ_CP045947|CRISPRCasFinder,CRT matches to CP024685 (Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-1-490K, complete sequence) position: , mismatch: 8, identity: 0.75 

cgtcactttctgacattttattcagttcgtta	CRISPR spacer
attcactatcagacattttattcagttctgcc	Protospacer
  ***** ** *****************  .

58. spacer 2.24|948261|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NZ_CP031801 (Klebsiella pneumoniae strain MSB1_8A-sc-2280397 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75 

cgtcactttctgacattttattcagttcgtta	CRISPR spacer
cgcgcgtgtctgacattgtattcagttcattt	Protospacer
**.   * ********* **********.**

59. spacer 3.1|964907|33|NZ_CP045947|PILER-CR matches to NZ_CP014127 (Pantoea vagans strain FDAARGOS_160 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.758 

tcccaccgcgctgattaacgacggactgttaca	CRISPR spacer
cggcaccgggctgattaacgccggactgtatcg	Protospacer
.  ***** *********** ********  *.

60. spacer 3.1|964907|33|NZ_CP045947|PILER-CR matches to NZ_CP028350 (Pantoea vagans strain PV989 plasmid pPV989-508, complete sequence) position: , mismatch: 8, identity: 0.758 

tcccaccgcgctgattaacgacggactgttaca	CRISPR spacer
cggcaccgggctgattaacgccggactgtatcg	Protospacer
.  ***** *********** ********  *.

61. spacer 3.1|964907|33|NZ_CP045947|PILER-CR matches to NC_014258 (Pantoea vagans C9-1 plasmid pPag3, complete sequence) position: , mismatch: 8, identity: 0.758 

tcccaccgcgctgattaacgacggactgttaca	CRISPR spacer
cggcaccgggctgattaacgccggactgtatcg	Protospacer
.  ***** *********** ********  *.

62. spacer 3.1|964907|33|NZ_CP045947|PILER-CR matches to NZ_CP038854 (Pantoea vagans strain LMG 24199 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.758 

tcccaccgcgctgattaacgacggactgttaca	CRISPR spacer
cggcaccgggctgattaacgccggactgtatcg	Protospacer
.  ***** *********** ********  *.

63. spacer 3.9|965396|33|NZ_CP045947|PILER-CR matches to NC_008269 (Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence) position: , mismatch: 8, identity: 0.758 

gcgtcactaccgagaccgagaccgagaccgaga------	CRISPR spacer
------caaccgagaccgagaccgagacccagacccagt	Protospacer
      * ********************* ***

64. spacer 3.9|965396|33|NZ_CP045947|PILER-CR matches to NC_006363 (Nocardia farcinica IFM 10152 plasmid pNF2, complete sequence) position: , mismatch: 8, identity: 0.758 

gcgtcactaccgagaccgagaccgagaccgaga	CRISPR spacer
ccatccgcaccgagaccgcgaccgagatcgagc	Protospacer
 *.**  .********** ********.****

65. spacer 3.9|965396|33|NZ_CP045947|PILER-CR matches to NZ_LN868942 (Nocardia farcinica strain NCTC11134 plasmid 5, complete sequence) position: , mismatch: 8, identity: 0.758 

gcgtcactaccgagaccgagaccgagaccgaga	CRISPR spacer
ccatccgcaccgagaccgcgaccgagatcgagc	Protospacer
 *.**  .********** ********.****

66. spacer 3.9|965396|33|NZ_CP045947|PILER-CR matches to NZ_CP031420 (Nocardia farcinica strain W6977 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.758 

gcgtcactaccgagaccgagaccgagaccgaga	CRISPR spacer
ccatccgcaccgagaccgcgaccgagatcgagc	Protospacer
 *.**  .********** ********.****

67. spacer 3.9|965396|33|NZ_CP045947|PILER-CR matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 8, identity: 0.758 

gcgtcactaccgagaccgagaccgagaccgaga	CRISPR spacer
acgccgaggccgagaccgaggccgaggccgaga	Protospacer
.**.*.  .***********.*****.******

68. spacer 3.13|965640|33|NZ_CP045947|PILER-CR matches to NZ_CP041075 (Bacillus tropicus strain LM1212-W3 plasmid p2, complete sequence) position: , mismatch: 8, identity: 0.758 

gttacgtgtttattcatctgttgcattagattc	CRISPR spacer
aattggtgtttcttcatctattgcattagaagc	Protospacer
. *  ****** *******.**********  *

69. spacer 3.13|965640|33|NZ_CP045947|PILER-CR matches to NZ_CP024773 (Bacillus thuringiensis LM1212 plasmid pLM2, complete sequence) position: , mismatch: 8, identity: 0.758 

gttacgtgtttattcatctgttgcattagattc	CRISPR spacer
aattggtgtttcttcatctattgcattagaagc	Protospacer
. *  ****** *******.**********  *

70. spacer 3.21|964908|32|NZ_CP045947|CRISPRCasFinder,CRT matches to MK524494 (Mycobacterium phage Rabbs, complete genome) position: , mismatch: 8, identity: 0.75 

cccaccgcgctgattaacgacggactgttaca	CRISPR spacer
catatcgcgctggtcaacgacggactgttggg	Protospacer
* .*.*******.*.**************. .

71. spacer 3.21|964908|32|NZ_CP045947|CRISPRCasFinder,CRT matches to KX641266 (Mycobacterium phage Terror, complete genome) position: , mismatch: 8, identity: 0.75 

cccaccgcgctgattaacgacggactgttaca	CRISPR spacer
catatcgcgctggtcaacgacggactgttggg	Protospacer
* .*.*******.*.**************. .

72. spacer 3.21|964908|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NC_031102 (Mycobacterium phage Sneeze, complete genome) position: , mismatch: 8, identity: 0.75 

cccaccgcgctgattaacgacggactgttaca	CRISPR spacer
catatcgcgctggtcaacgacggactgttggg	Protospacer
* .*.*******.*.**************. .

73. spacer 3.21|964908|32|NZ_CP045947|CRISPRCasFinder,CRT matches to KX641265 (Mycobacterium phage Taheera, complete genome) position: , mismatch: 8, identity: 0.75 

cccaccgcgctgattaacgacggactgttaca	CRISPR spacer
catatcgcgctggtcaacgacggactgttggg	Protospacer
* .*.*******.*.**************. .

74. spacer 3.21|964908|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NC_014811 (Mycolicibacterium gilvum Spyr1 plasmid pMSPYR101, complete sequence) position: , mismatch: 8, identity: 0.75 

cccaccgcgctgattaacgacggactgttaca	CRISPR spacer
gccaccgcgctgatcaacgccggagtctccct	Protospacer
 *************.**** **** * *. *

75. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NZ_CP025013 (Rhizobium leguminosarum strain Norway plasmid pRLN1, complete sequence) position: , mismatch: 8, identity: 0.75 

cgtcactaccgagaccgagaccgagaccgaga	CRISPR spacer
aagcgtcgtcgagaccgagaccgagaccgaga	Protospacer
 . *.....***********************

76. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NC_008269 (Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence) position: , mismatch: 8, identity: 0.75 

cgtcactaccgagaccgagaccgagaccgaga------	CRISPR spacer
------aaccgagaccgagaccgagacccagacccagt	Protospacer
       ********************* ***

77. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to JQ807255 (Environmental Halophage eHP-36, partial genome) position: , mismatch: 8, identity: 0.75 

cgtcactaccgagaccgagaccgagaccgaga	CRISPR spacer
cactggaaccgagaccgagaccgagaccgatg	Protospacer
*....  *********************** .

78. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to MH509446 (Gordonia phage DelRio, complete genome) position: , mismatch: 8, identity: 0.75 

cgtcactaccgagaccgagaccgagaccgaga	CRISPR spacer
gaccgcgaccgagaccgaaaccgagacggagt	Protospacer
 ..*.* ***********.******** ***

79. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 8, identity: 0.75 

cgtcactaccgagaccgagaccgagaccgaga	CRISPR spacer
ggccgagaccgaggccgaggccgagaccgagg	Protospacer
 *.*.  ******.*****.***********.

80. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to MK359319 (Gordonia phage Parada, complete genome) position: , mismatch: 8, identity: 0.75 

cgtcactaccgagaccgagaccgagaccgaga	CRISPR spacer
gacctcgaccgagaccgaaaccgagacggagt	Protospacer
 ..* * ***********.******** ***

81. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to MK359319 (Gordonia phage Parada, complete genome) position: , mismatch: 8, identity: 0.75 

cgtcactaccgagaccgagaccgagaccgaga	CRISPR spacer
cgagggcaccgagacctcgaccgagaccgaaa	Protospacer
**  . .*********  ************.*

82. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to MK376958 (Gordonia phage Brylie, complete genome) position: , mismatch: 8, identity: 0.75 

cgtcactaccgagaccgagaccgagaccgaga	CRISPR spacer
gacctcgaccgagaccgaaaccgagacggagt	Protospacer
 ..* * ***********.******** ***

83. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to MK376958 (Gordonia phage Brylie, complete genome) position: , mismatch: 8, identity: 0.75 

cgtcactaccgagaccgagaccgagaccgaga	CRISPR spacer
cgagggcaccgagacctcgaccgagaccgaaa	Protospacer
**  . .*********  ************.*

84. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to MH399781 (Gordonia phage Nadeem, complete genome) position: , mismatch: 8, identity: 0.75 

cgtcactaccgagaccgagaccgagaccgaga	CRISPR spacer
gacctcgaccgagaccgaaaccgagacggagt	Protospacer
 ..* * ***********.******** ***

85. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to MH399781 (Gordonia phage Nadeem, complete genome) position: , mismatch: 8, identity: 0.75 

cgtcactaccgagaccgagaccgagaccgaga	CRISPR spacer
cgagggcaccgagacctcgaccgagaccgaaa	Protospacer
**  . .*********  ************.*

86. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to MK967392 (Gordonia phage GrandSlam, complete genome) position: , mismatch: 8, identity: 0.75 

cgtcactaccgagaccgagaccgagaccgaga	CRISPR spacer
gacctcgaccgagaccgaaaccgagacggagt	Protospacer
 ..* * ***********.******** ***

87. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to MK967392 (Gordonia phage GrandSlam, complete genome) position: , mismatch: 8, identity: 0.75 

cgtcactaccgagaccgagaccgagaccgaga	CRISPR spacer
cgagggcaccgagacctcgaccgagaccgaaa	Protospacer
**  . .*********  ************.*

88. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to MK279893 (Gordonia phage WheatThin, complete genome) position: , mismatch: 8, identity: 0.75 

cgtcactaccgagaccgagaccgagaccgaga	CRISPR spacer
gacctcgaccgagaccgaaaccgagacggagt	Protospacer
 ..* * ***********.******** ***

89. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to MK279893 (Gordonia phage WheatThin, complete genome) position: , mismatch: 8, identity: 0.75 

cgtcactaccgagaccgagaccgagaccgaga	CRISPR spacer
cgagggcaccgagacctcgaccgagaccgaaa	Protospacer
**  . .*********  ************.*

90. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to MT701595 (Streptomyces phage Shaeky, complete genome) position: , mismatch: 8, identity: 0.75 

cgtcactaccgagaccgagaccgagaccgaga	CRISPR spacer
cgaggacaccgagaccgaggccgaggccgagg	Protospacer
**  . .************.*****.*****.

91. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NC_031247 (Gordonia phage BetterKatz, complete genome) position: , mismatch: 8, identity: 0.75 

cgtcactaccgagaccgagaccgagaccgaga	CRISPR spacer
gacctcgaccgagaccgaaaccgagacggagt	Protospacer
 ..* * ***********.******** ***

92. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NC_031247 (Gordonia phage BetterKatz, complete genome) position: , mismatch: 8, identity: 0.75 

cgtcactaccgagaccgagaccgagaccgaga	CRISPR spacer
cgaaggcaccgagacctcgaccgagaccgaaa	Protospacer
**  . .*********  ************.*

93. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to MK305885 (Gordonia phage Mulch, complete genome) position: , mismatch: 8, identity: 0.75 

cgtcactaccgagaccgagaccgagaccgaga	CRISPR spacer
gacctcgaccgagaccgaaaccgagacggagt	Protospacer
 ..* * ***********.******** ***

94. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to MK305885 (Gordonia phage Mulch, complete genome) position: , mismatch: 8, identity: 0.75 

cgtcactaccgagaccgagaccgagaccgaga	CRISPR spacer
cgagggcaccgagacctcgaccgagaccgaaa	Protospacer
**  . .*********  ************.*

95. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NZ_CP014599 (Yangia sp. CCB-MM3 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.75 

cgtcactaccgagaccgagaccgagaccgaga	CRISPR spacer
ctacagcaccaagaccgagaccgagacggaat	Protospacer
*  ** .***.**************** **.

96. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to MG269973 (TM7 phage DolZOral124_53_65, complete genome) position: , mismatch: 8, identity: 0.75 

-----cgtcactaccgagaccgagaccgagaccgaga	CRISPR spacer
acaagcgt-----ccgaaaccgaaaccgagaccgagc	Protospacer
     ***     ****.*****.************

97. spacer 3.30|965458|32|NZ_CP045947|CRISPRCasFinder,CRT matches to AP013976 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C7-MedDCM-OCT-S26-C28, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.75 

ccgctgacgcactggatcaacctgacgcaacg	CRISPR spacer
acgcatcagcactggatcaagctggcgcaact	Protospacer
 ***    ************ ***.******

98. spacer 3.30|965458|32|NZ_CP045947|CRISPRCasFinder,CRT matches to JX536274 (Uncultured Mediterranean phage MEDS5 group fosmid MedDCM-OCT-S15-C5, complete sequence) position: , mismatch: 8, identity: 0.75 

ccgctgacgcactggatcaacctgacgcaacg	CRISPR spacer
acgcatcagcactggatcaagctggcgcaact	Protospacer
 ***    ************ ***.******

99. spacer 3.34|965702|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NZ_CP016179 (Vibrio breoganii strain FF50 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75 

gaggcgtac-----aggctgttagatgagaaattacc	CRISPR spacer
-----atactaataaggctgtttgatgcgaaattacc	Protospacer
     .***     ******** **** *********

100. spacer 4.2|966355|32|NZ_CP045947|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016489 (Synechococcus sp. PCC 8807 plasmid unnamed6, complete sequence) position: , mismatch: 8, identity: 0.75 

ttcttgaatatgattgcgggtatatgtggata	CRISPR spacer
ctcttgaatatgattgcgggtttagatttacc	Protospacer
.******************** ** .*  *.

101. spacer 4.2|966355|32|NZ_CP045947|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016476 (Synechococcus sp. PCC 7003 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75 

ttcttgaatatgattgcgggtatatgtggata	CRISPR spacer
ctcttgaatatgattgcgggtttagatttacc	Protospacer
.******************** ** .*  *.

102. spacer 4.8|966721|32|NZ_CP045947|PILER-CR,CRISPRCasFinder,CRT matches to MN855803 (Bacteriophage sp. isolate 108, partial genome) position: , mismatch: 8, identity: 0.75 

ggttaaccaggggtttttccccactatttcgc	CRISPR spacer
aggtaacgaggggtttttccccaatattgaaa	Protospacer
.* **** *************** ****  .

103. spacer 2.2|947528|32|NZ_CP045947|PILER-CR,CRISPRCasFinder,CRT matches to MN693046 (Marine virus AFVG_25M413, complete genome) position: , mismatch: 9, identity: 0.719 

gcgaggtcaataaaaaatggtgtggctttacc	CRISPR spacer
ttagggtcaacaaaaaatggtgtggtttcaga	Protospacer
 ...******.**************.**.*

104. spacer 2.2|947528|32|NZ_CP045947|PILER-CR,CRISPRCasFinder,CRT matches to MN693008 (Marine virus AFVG_117M9, complete genome) position: , mismatch: 9, identity: 0.719 

gcgaggtcaataaaaaatggtgtggctttacc	CRISPR spacer
ttagggtcaacaaaaaatggtgtggtttcaga	Protospacer
 ...******.**************.**.*

105. spacer 2.3|947589|32|NZ_CP045947|PILER-CR,CRISPRCasFinder,CRT matches to DQ674738 (Aeromonas phage phiO18P, complete genome) position: , mismatch: 9, identity: 0.719 

ccggcatcagcgccgatccgttcatagtgccc	CRISPR spacer
ccggcatcagcgccgagcagttcagcaaactg	Protospacer
**************** * *****  . .*.

106. spacer 2.3|947589|32|NZ_CP045947|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031166 (Euzebya sp. DY32-46 plasmid pEDY32-46I, complete sequence) position: , mismatch: 9, identity: 0.719 

ccggcatcagcgccgatccgttcatagtgccc	CRISPR spacer
gcggcatcagcgccgaccggttcaccgtcagg	Protospacer
 ***************.* *****. **

107. spacer 2.3|947589|32|NZ_CP045947|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 9, identity: 0.719 

ccggcatcagcgccgatccgttcatagtgccc	CRISPR spacer
ccggcatgagcgccgatcagttcgacgccctg	Protospacer
******* ********** ****.  *. *.

108. spacer 2.6|947772|32|NZ_CP045947|PILER-CR,CRISPRCasFinder,CRT matches to MN694645 (Marine virus AFVG_250M761, complete genome) position: , mismatch: 9, identity: 0.719 

aacaggaacaggaaaaaaaagatttgtccggt	CRISPR spacer
tacagtaacaggaaaaaaaggattaatgatgc	Protospacer
 **** *************.**** .*   *.

109. spacer 2.7|947833|32|NZ_CP045947|PILER-CR,CRISPRCasFinder,CRT matches to MN062720 (Microbacterium phage FuzzBuster, complete genome) position: , mismatch: 9, identity: 0.719 

cagatcctcaacggtcaggctgtttagttcct	CRISPR spacer
cagatcgtcaacggtcagcctgtccaggagga	Protospacer
****** *********** ****..**

110. spacer 2.12|948141|32|NZ_CP045947|PILER-CR matches to NZ_CP051686 (Duganella sp. GN2-R2 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719 

ccccgatagcgacgcttctgtagtcactggca	CRISPR spacer
gtccgatagcgacacttcggtagtcaggcgtg	Protospacer
 .***********.**** *******   *..

111. spacer 2.22|948138|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NZ_CP051686 (Duganella sp. GN2-R2 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719 

ccccgatagcgacgcttctgtagtcactggca	CRISPR spacer
gtccgatagcgacacttcggtagtcaggcgtg	Protospacer
 .***********.**** *******   *..

112. spacer 3.1|964907|33|NZ_CP045947|PILER-CR matches to MK524494 (Mycobacterium phage Rabbs, complete genome) position: , mismatch: 9, identity: 0.727 

tcccaccgcgctgattaacgacggactgttaca	CRISPR spacer
ccatatcgcgctggtcaacgacggactgttggg	Protospacer
.* .*.*******.*.**************. .

113. spacer 3.1|964907|33|NZ_CP045947|PILER-CR matches to KX641266 (Mycobacterium phage Terror, complete genome) position: , mismatch: 9, identity: 0.727 

tcccaccgcgctgattaacgacggactgttaca	CRISPR spacer
ccatatcgcgctggtcaacgacggactgttggg	Protospacer
.* .*.*******.*.**************. .

114. spacer 3.1|964907|33|NZ_CP045947|PILER-CR matches to NC_031102 (Mycobacterium phage Sneeze, complete genome) position: , mismatch: 9, identity: 0.727 

tcccaccgcgctgattaacgacggactgttaca	CRISPR spacer
ccatatcgcgctggtcaacgacggactgttggg	Protospacer
.* .*.*******.*.**************. .

115. spacer 3.1|964907|33|NZ_CP045947|PILER-CR matches to KX641265 (Mycobacterium phage Taheera, complete genome) position: , mismatch: 9, identity: 0.727 

tcccaccgcgctgattaacgacggactgttaca	CRISPR spacer
ccatatcgcgctggtcaacgacggactgttggg	Protospacer
.* .*.*******.*.**************. .

116. spacer 3.9|965396|33|NZ_CP045947|PILER-CR matches to MH509446 (Gordonia phage DelRio, complete genome) position: , mismatch: 9, identity: 0.727 

gcgtcactaccgagaccgagaccgagaccgaga	CRISPR spacer
agaccgcgaccgagaccgaaaccgagacggagt	Protospacer
. ..*.* ***********.******** ***

117. spacer 3.9|965396|33|NZ_CP045947|PILER-CR matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 9, identity: 0.727 

gcgtcactaccgagaccgagaccgagaccgaga	CRISPR spacer
aggccgagaccgaggccgaggccgagaccgagg	Protospacer
. *.*.  ******.*****.***********.

118. spacer 3.9|965396|33|NZ_CP045947|PILER-CR matches to MK359319 (Gordonia phage Parada, complete genome) position: , mismatch: 9, identity: 0.727 

gcgtcactaccgagaccgagaccgagaccgaga	CRISPR spacer
agacctcgaccgagaccgaaaccgagacggagt	Protospacer
. ..* * ***********.******** ***

119. spacer 3.9|965396|33|NZ_CP045947|PILER-CR matches to MK376958 (Gordonia phage Brylie, complete genome) position: , mismatch: 9, identity: 0.727 

gcgtcactaccgagaccgagaccgagaccgaga	CRISPR spacer
agacctcgaccgagaccgaaaccgagacggagt	Protospacer
. ..* * ***********.******** ***

120. spacer 3.9|965396|33|NZ_CP045947|PILER-CR matches to MH399781 (Gordonia phage Nadeem, complete genome) position: , mismatch: 9, identity: 0.727 

gcgtcactaccgagaccgagaccgagaccgaga	CRISPR spacer
agacctcgaccgagaccgaaaccgagacggagt	Protospacer
. ..* * ***********.******** ***

121. spacer 3.9|965396|33|NZ_CP045947|PILER-CR matches to MK967392 (Gordonia phage GrandSlam, complete genome) position: , mismatch: 9, identity: 0.727 

gcgtcactaccgagaccgagaccgagaccgaga	CRISPR spacer
agacctcgaccgagaccgaaaccgagacggagt	Protospacer
. ..* * ***********.******** ***

122. spacer 3.9|965396|33|NZ_CP045947|PILER-CR matches to MK279893 (Gordonia phage WheatThin, complete genome) position: , mismatch: 9, identity: 0.727 

gcgtcactaccgagaccgagaccgagaccgaga	CRISPR spacer
agacctcgaccgagaccgaaaccgagacggagt	Protospacer
. ..* * ***********.******** ***

123. spacer 3.9|965396|33|NZ_CP045947|PILER-CR matches to MT701595 (Streptomyces phage Shaeky, complete genome) position: , mismatch: 9, identity: 0.727 

gcgtcactaccgagaccgagaccgagaccgaga	CRISPR spacer
ccgaggacaccgagaccgaggccgaggccgagg	Protospacer
 **  . .************.*****.*****.

124. spacer 3.9|965396|33|NZ_CP045947|PILER-CR matches to NC_031247 (Gordonia phage BetterKatz, complete genome) position: , mismatch: 9, identity: 0.727 

gcgtcactaccgagaccgagaccgagaccgaga	CRISPR spacer
agacctcgaccgagaccgaaaccgagacggagt	Protospacer
. ..* * ***********.******** ***

125. spacer 3.9|965396|33|NZ_CP045947|PILER-CR matches to MK305885 (Gordonia phage Mulch, complete genome) position: , mismatch: 9, identity: 0.727 

gcgtcactaccgagaccgagaccgagaccgaga	CRISPR spacer
agacctcgaccgagaccgaaaccgagacggagt	Protospacer
. ..* * ***********.******** ***

126. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NZ_CP028537 (Enterobacter hormaechei strain SCEH020042 plasmid pQnrB4_020042, complete sequence) position: , mismatch: 9, identity: 0.719 

cgtcactaccgagaccgagaccgagaccgaga------	CRISPR spacer
------atccgagaccgagaccgagaccgataccgaat	Protospacer
        ********************** *

127. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NZ_AP023191 (Escherichia coli strain TUM18530 plasmid pMTY18530-1_lncHI2, complete sequence) position: , mismatch: 9, identity: 0.719 

cgtcactaccgagaccgagaccgagaccgaga------	CRISPR spacer
------atccgagaccgagaccgagaccgataccgaat	Protospacer
        ********************** *

128. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to MN539017 (Salmonella sp. strain PJM1 plasmid pPJM1, complete sequence) position: , mismatch: 9, identity: 0.719 

cgtcactaccgagaccgagaccgagaccgaga------	CRISPR spacer
------atccgagaccgagaccgagaccgataccgaat	Protospacer
        ********************** *

129. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to MN539018 (Salmonella sp. strain OYZ4 plasmid pOYZ4, complete sequence) position: , mismatch: 9, identity: 0.719 

cgtcactaccgagaccgagaccgagaccgaga------	CRISPR spacer
------atccgagaccgagaccgagaccgataccgaat	Protospacer
        ********************** *

130. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to MT077888 (Escherichia coli plasmid p65, complete sequence) position: , mismatch: 9, identity: 0.719 

cgtcactaccgagaccgagaccgagaccgaga------	CRISPR spacer
------atccgagaccgagaccgagaccgataccgaat	Protospacer
        ********************** *

131. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NC_009838 (Escherichia coli APEC O1 plasmid pAPEC-O1-R, complete sequence) position: , mismatch: 9, identity: 0.719 

cgtcactaccgagaccgagaccgagaccgaga------	CRISPR spacer
------atccgagaccgagaccgagaccgataccgaat	Protospacer
        ********************** *

132. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NZ_CP044306 (Escherichia coli strain C27A plasmid pC27A-CTX-M-55, complete sequence) position: , mismatch: 9, identity: 0.719 

cgtcactaccgagaccgagaccgagaccgaga------	CRISPR spacer
------atccgagaccgagaccgagaccgataccgaat	Protospacer
        ********************** *

133. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NZ_CP039170 (Salmonella enterica subsp. enterica serovar Goldcoast strain Sal-5364 plasmid pSal-5364, complete sequence) position: , mismatch: 9, identity: 0.719 

cgtcactaccgagaccgagaccgagaccgaga------	CRISPR spacer
------atccgagaccgagaccgagaccgataccgaat	Protospacer
        ********************** *

134. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to CP048299 (Salmonella enterica subsp. enterica serovar Schwarzengrund strain WAPHL_SAL-A00527 plasmid pN1566-2, complete sequence) position: , mismatch: 9, identity: 0.719 

cgtcactaccgagaccgagaccgagaccgaga------	CRISPR spacer
------atccgagaccgagaccgagaccgataccgaat	Protospacer
        ********************** *

135. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to CP048303 (Salmonella enterica subsp. enterica serovar Schwarzengrund strain WAPHL-SAL-A00375 plasmid p28945-2, complete sequence) position: , mismatch: 9, identity: 0.719 

cgtcactaccgagaccgagaccgagaccgaga------	CRISPR spacer
------atccgagaccgagaccgagaccgataccgaat	Protospacer
        ********************** *

136. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NZ_CP037959 (Salmonella enterica subsp. enterica serovar Goldcoast strain R18.0877 plasmid pR18.0877_278k, complete sequence) position: , mismatch: 9, identity: 0.719 

cgtcactaccgagaccgagaccgagaccgaga------	CRISPR spacer
------atccgagaccgagaccgagaccgataccgaat	Protospacer
        ********************** *

137. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NZ_CP039861 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014880 plasmid p16-6773.1, complete sequence) position: , mismatch: 9, identity: 0.719 

cgtcactaccgagaccgagaccgagaccgaga------	CRISPR spacer
------atccgagaccgagaccgagaccgataccgaat	Protospacer
        ********************** *

138. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NZ_CP048776 (Salmonella enterica subsp. enterica serovar Agona strain SG17-135 plasmid pSG17-135-HI2, complete sequence) position: , mismatch: 9, identity: 0.719 

cgtcactaccgagaccgagaccgagaccgaga------	CRISPR spacer
------atccgagaccgagaccgagaccgataccgaat	Protospacer
        ********************** *

139. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NC_019114 (Salmonella enterica subsp. enterica serovar Heidelberg plasmid pSH111_227, complete sequence) position: , mismatch: 9, identity: 0.719 

cgtcactaccgagaccgagaccgagaccgaga------	CRISPR spacer
------atccgagaccgagaccgagaccgataccgaat	Protospacer
        ********************** *

140. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NZ_AP023198 (Escherichia coli strain TUM18780 plasmid pMTY18780-1_lncHI2, complete sequence) position: , mismatch: 9, identity: 0.719 

cgtcactaccgagaccgagaccgagaccgaga------	CRISPR spacer
------atccgagaccgagaccgagaccgataccgaat	Protospacer
        ********************** *

141. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NZ_CP043223 (Salmonella enterica subsp. enterica serovar Bredeney strain SA20114778WT plasmid pET1.1-IncH, complete sequence) position: , mismatch: 9, identity: 0.719 

cgtcactaccgagaccgagaccgagaccgaga------	CRISPR spacer
------atccgagaccgagaccgagaccgataccgaat	Protospacer
        ********************** *

142. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NZ_CP043223 (Salmonella enterica subsp. enterica serovar Bredeney strain SA20114778WT plasmid pET1.1-IncH, complete sequence) position: , mismatch: 9, identity: 0.719 

cgtcactaccgagaccgagaccgagaccgaga------	CRISPR spacer
------atccgagaccgagaccgagaccgataccgaat	Protospacer
        ********************** *

143. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NZ_CP027411 (Salmonella enterica strain FDAARGOS_319 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719 

cgtcactaccgagaccgagaccgagaccgaga------	CRISPR spacer
------atccgagaccgagaccgagaccgataccgaat	Protospacer
        ********************** *

144. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to JQ807227 (Environmental Halophage eHP-6, partial genome) position: , mismatch: 9, identity: 0.719 

cgtcactaccgagaccgagaccgagaccgaga	CRISPR spacer
cactggaaccgggaccgagaccgagaccgatg	Protospacer
*....  ****.****************** .

145. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 9, identity: 0.719 

cgtcactaccgagaccgagaccgagaccgaga	CRISPR spacer
caccgacgccgaggccgagaccgaggccgagg	Protospacer
*..*. ..*****.***********.*****.

146. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NC_019201 (Streptomyces sp. x4(2010) plasmid pTSC1, complete sequence) position: , mismatch: 9, identity: 0.719 

cgtcactaccgagaccgagaccgagaccgaga	CRISPR spacer
acgcgagactgagaccgagactgagaccgagc	Protospacer
   *.  **.***********.*********

147. spacer 3.31|965519|32|NZ_CP045947|CRISPRCasFinder,CRT matches to MT162468 (Synechococcus phage S-H25, complete genome) position: , mismatch: 9, identity: 0.719 

ttgcag----ggcgatattgttgttggtgaatggga	CRISPR spacer
----aacactgacgatattattgttggtgattgggg	Protospacer
    *.    *.*******.********** ****.

148. spacer 3.38|965946|32|NZ_CP045947|CRISPRCasFinder,CRT matches to MK448228 (Klebsiella phage ST15-VIM1phi2.1, complete genome) position: , mismatch: 9, identity: 0.719 

gtcgttcatcaggcactaccggcactttctgg	CRISPR spacer
tgagttcatccggcactaccggcgctggatgc	Protospacer
   ******* ************.**   **

149. spacer 2.7|947833|32|NZ_CP045947|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019257 (Escherichia coli strain 13TMH22 plasmid p13TMH22-1, complete sequence) position: , mismatch: 10, identity: 0.688 

cagatcctcaacggtcaggctgtttagttcct	CRISPR spacer
cagatcgtcaaccgtcaggctgtcggtaaacc	Protospacer
****** ***** **********. .    *.

150. spacer 2.7|947833|32|NZ_CP045947|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019274 (Escherichia coli strain 13P477T plasmid p13P477T-1, complete sequence) position: , mismatch: 10, identity: 0.688 

cagatcctcaacggtcaggctgtttagttcct	CRISPR spacer
cagatcgtcaaccgtcaggctgtcggtaaacc	Protospacer
****** ***** **********. .    *.

151. spacer 2.7|947833|32|NZ_CP045947|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019275 (Escherichia coli strain 13P477T plasmid p13P477T-2, complete sequence) position: , mismatch: 10, identity: 0.688 

cagatcctcaacggtcaggctgtttagttcct	CRISPR spacer
cagatcgtcaaccgtcaggctgtcggtaaacc	Protospacer
****** ***** **********. .    *.

152. spacer 2.7|947833|32|NZ_CP045947|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019279 (Escherichia coli strain 13P477T plasmid p13P477T-6, complete sequence) position: , mismatch: 10, identity: 0.688 

cagatcctcaacggtcaggctgtttagttcct	CRISPR spacer
cagatcgtcaaccgtcaggctgtcggtaaacc	Protospacer
****** ***** **********. .    *.

153. spacer 2.7|947833|32|NZ_CP045947|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019246 (Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence) position: , mismatch: 10, identity: 0.688 

cagatcctcaacggtcaggctgtttagttcct	CRISPR spacer
cagatcgtcaaccgtcaggctgtcggtaaacc	Protospacer
****** ***** **********. .    *.

154. spacer 2.7|947833|32|NZ_CP045947|PILER-CR,CRISPRCasFinder,CRT matches to NC_049342 (Escherichia phage 500465-1, complete genome) position: , mismatch: 10, identity: 0.688 

cagatcctcaacggtcaggctgtttagttcct	CRISPR spacer
cagatcgtcaaccgtcaggctgtcggtaaacc	Protospacer
****** ***** **********. .    *.

155. spacer 2.7|947833|32|NZ_CP045947|PILER-CR,CRISPRCasFinder,CRT matches to KY271398 (Klebsiella phage 4 LV-2017, complete genome) position: , mismatch: 10, identity: 0.688 

cagatcctcaacggtcaggctgtttagttcct	CRISPR spacer
cagatcgtcaaccgtcaggctgtcggtaaacc	Protospacer
****** ***** **********. .    *.

156. spacer 2.7|947833|32|NZ_CP045947|PILER-CR,CRISPRCasFinder,CRT matches to CP025900 (Escherichia phage sp., complete genome) position: , mismatch: 10, identity: 0.688 

cagatcctcaacggtcaggctgtttagttcct	CRISPR spacer
cagatcgtcaaccgtcaggctgtcggtaaacc	Protospacer
****** ***** **********. .    *.

157. spacer 2.18|948508|32|NZ_CP045947|PILER-CR matches to NZ_CP044072 (Pseudomonas oryzihabitans strain FDAARGOS_657 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688 

ttgatcgagagtgcgaagaggcagaacgggca	CRISPR spacer
gaaggtggcagtgccaagagacagaacgggca	Protospacer
  .. .*. ***** *****.***********

158. spacer 2.28|948505|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NZ_CP044072 (Pseudomonas oryzihabitans strain FDAARGOS_657 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688 

ttgatcgagagtgcgaagaggcagaacgggca	CRISPR spacer
gaaggtggcagtgccaagagacagaacgggca	Protospacer
  .. .*. ***** *****.***********

159. spacer 2.31|948688|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NZ_CP054615 (Azospirillum oryzae strain KACC 14407 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688 

cgttcatcggcagcgtcacgcaatatgaagat	CRISPR spacer
acatcatcggcatcgtcacgccatatccggca	Protospacer
   ********* ******** ****  .*

160. spacer 3.9|965396|33|NZ_CP045947|PILER-CR matches to NZ_CP045074 (Paracoccus kondratievae strain BJQ0001 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.697 

gcgtcactaccgagaccgagaccgagaccgaga	CRISPR spacer
gcgccacaaccgagaccgagaccgggctgcgcg	Protospacer
***.*** ****************.* .  . .

161. spacer 3.10|965457|33|NZ_CP045947|PILER-CR matches to NZ_CP020539 (Sphingobium herbicidovorans strain MH plasmid pMSHV, complete sequence) position: , mismatch: 10, identity: 0.697 

gccgctgacgcactggatcaacctgacgcaacg	CRISPR spacer
gaatctgacgcacttgatcaacctggcgtttga	Protospacer
*   ********** **********.**.   .

162. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NZ_KY689633 (Escherichia coli strain 100R plasmid p100R, complete sequence) position: , mismatch: 10, identity: 0.688 

cgtcactaccgagaccgagaccgagaccgaga------	CRISPR spacer
------atccgagaccgagaccgataccgataccgata	Protospacer
        **************** ***** *

163. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NZ_KY689632 (Escherichia coli strain 19-M12 plasmid p19M12, complete sequence) position: , mismatch: 10, identity: 0.688 

cgtcactaccgagaccgagaccgagaccgaga------	CRISPR spacer
------atccgagaccgagaccgataccgataccgata	Protospacer
        **************** ***** *

164. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NZ_CP045446 (Salmonella enterica subsp. enterica serovar Schwarzengrund strain 9355 plasmid p280_9355, complete sequence) position: , mismatch: 10, identity: 0.688 

cgtcactaccgagaccgagaccgagaccgaga------	CRISPR spacer
------atccgagaccgagaccgataccgataccgata	Protospacer
        **************** ***** *

165. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NZ_KU743384 (Escherichia coli strain SA26 plasmid pSA26-MCR-1, complete sequence) position: , mismatch: 10, identity: 0.688 

cgtcactaccgagaccgagaccgagaccgaga------	CRISPR spacer
------atccgagaccgagaccgataccgataccgata	Protospacer
        **************** ***** *

166. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NZ_KU254578 (Escherichia coli strain YD786 plasmid pYD786-1, complete sequence) position: , mismatch: 10, identity: 0.688 

cgtcactaccgagaccgagaccgagaccgaga------	CRISPR spacer
------atccgagaccgagaccgataccgataccgata	Protospacer
        **************** ***** *

167. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NZ_KX129782 (Escherichia coli strain S38 plasmid pS38, complete sequence) position: , mismatch: 10, identity: 0.688 

cgtcactaccgagaccgagaccgagaccgaga------	CRISPR spacer
------atccgagaccgagaccgataccgataccgata	Protospacer
        **************** ***** *

168. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NZ_CP015833 (Escherichia coli O157 strain 180-PT54 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688 

cgtcactaccgagaccgagaccgagaccgaga------	CRISPR spacer
------atccgagaccgagaccgataccgataccgata	Protospacer
        **************** ***** *

169. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to LT221036 (Yersinia pseudotuberculosis strain Yps.F1, plasmid pYps.F1 complete sequence) position: , mismatch: 10, identity: 0.688 

cgtcactaccgagaccgagaccgagaccgaga------	CRISPR spacer
------atccgagaccgagaccgataccgataccgata	Protospacer
        **************** ***** *

170. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to CP019195 (Salmonella enterica subsp. enterica serovar Senftenberg str. ATCC 43845 plasmid pATCC43845, complete sequence) position: , mismatch: 10, identity: 0.688 

cgtcactaccgagaccgagaccgagaccgaga------	CRISPR spacer
------atccgagaccgagaccgataccgataccgata	Protospacer
        **************** ***** *

171. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NZ_CP045449 (Salmonella enterica subsp. enterica serovar Schwarzengrund strain 12888 plasmid p280_12888, complete sequence) position: , mismatch: 10, identity: 0.688 

cgtcactaccgagaccgagaccgagaccgaga------	CRISPR spacer
------atccgagaccgagaccgataccgataccgata	Protospacer
        **************** ***** *

172. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NZ_CP015096 (Pelagibaca abyssi strain JLT2014 plasmid pPABY8, complete sequence) position: , mismatch: 10, identity: 0.688 

cgtcactaccgagaccgagaccgagaccgaga------	CRISPR spacer
------gaccgaggccgagaccgaggacgagaccgagg	Protospacer
       ******.***********. *****

173. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to MN732922 (Escherichia coli strain 49K plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688 

cgtcactaccgagaccgagaccgagaccgaga------	CRISPR spacer
------atccgagaccgagaccgataccgataccgata	Protospacer
        **************** ***** *

174. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NZ_CP020493 (Salmonella enterica subsp. enterica strain 08-00436 plasmid pSE08-00436-1, complete sequence) position: , mismatch: 10, identity: 0.688 

cgtcactaccgagaccgagaccgagaccgaga------	CRISPR spacer
------atccgagaccgagaccgataccgataccgata	Protospacer
        **************** ***** *

175. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to CP031284 (Escherichia fergusonii strain 40A plasmid p280_40A, complete sequence) position: , mismatch: 10, identity: 0.688 

cgtcactaccgagaccgagaccgagaccgaga------	CRISPR spacer
------atccgagaccgagaccgataccgataccgata	Protospacer
        **************** ***** *

176. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to CP042895 (Escherichia coli strain CFSAN061772 plasmid pCFSAN061772_02, complete sequence) position: , mismatch: 10, identity: 0.688 

cgtcactaccgagaccgagaccgagaccgaga------	CRISPR spacer
------atccgagaccgagaccgataccgataccgata	Protospacer
        **************** ***** *

177. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NZ_CP022735 (Escherichia coli strain SA186 plasmid pSA186_MCR1, complete sequence) position: , mismatch: 10, identity: 0.688 

cgtcactaccgagaccgagaccgagaccgaga------	CRISPR spacer
------atccgagaccgagaccgataccgataccgata	Protospacer
        **************** ***** *

178. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to CP042898 (Escherichia coli strain CFSAN061771 plasmid pCFSAN061771_02, complete sequence) position: , mismatch: 10, identity: 0.688 

cgtcactaccgagaccgagaccgagaccgaga------	CRISPR spacer
------atccgagaccgagaccgataccgataccgata	Protospacer
        **************** ***** *

179. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NZ_CP022165 (Escherichia coli strain M160133 plasmid pM160133_p1, complete sequence) position: , mismatch: 10, identity: 0.688 

cgtcactaccgagaccgagaccgagaccgaga------	CRISPR spacer
------atccgagaccgagaccgataccgataccgata	Protospacer
        **************** ***** *

180. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NZ_CP012931 (Salmonella enterica subsp. enterica serovar Heidelberg strain N13-01290 plasmid pN13-01290_23, complete sequence) position: , mismatch: 10, identity: 0.688 

cgtcactaccgagaccgagaccgagaccgaga------	CRISPR spacer
------atccgagaccgagaccgataccgataccgata	Protospacer
        **************** ***** *

181. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NZ_CP023143 (Escherichia coli strain CFSAN061770 plasmid pEGY1-MCR-1, complete sequence) position: , mismatch: 10, identity: 0.688 

cgtcactaccgagaccgagaccgagaccgaga------	CRISPR spacer
------atccgagaccgagaccgataccgataccgata	Protospacer
        **************** ***** *

182. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NZ_CP026936 (Escherichia coli strain CFS3292 plasmid pCFS3292-1, complete sequence) position: , mismatch: 10, identity: 0.688 

cgtcactaccgagaccgagaccgagaccgaga------	CRISPR spacer
------atccgagaccgagaccgataccgataccgata	Protospacer
        **************** ***** *

183. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NZ_CP025402 (Escherichia coli strain MS8345 plasmid pMS8345A, complete sequence) position: , mismatch: 10, identity: 0.688 

cgtcactaccgagaccgagaccgagaccgaga------	CRISPR spacer
------atccgagaccgagaccgataccgataccgata	Protospacer
        **************** ***** *

184. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NZ_CP026933 (Escherichia coli strain CFS3273 plasmid pCFS3273-1, complete sequence) position: , mismatch: 10, identity: 0.688 

cgtcactaccgagaccgagaccgagaccgaga------	CRISPR spacer
------atccgagaccgagaccgataccgataccgata	Protospacer
        **************** ***** *

185. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NZ_MH924589 (Escherichia coli strain RDB9 plasmid pRDB9, complete sequence) position: , mismatch: 10, identity: 0.688 

cgtcactaccgagaccgagaccgagaccgaga------	CRISPR spacer
------atccgagaccgagaccgataccgataccgata	Protospacer
        **************** ***** *

186. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NZ_MH208235 (Escherichia coli strain APECA2 plasmid pJMA2, complete sequence) position: , mismatch: 10, identity: 0.688 

cgtcactaccgagaccgagaccgagaccgaga------	CRISPR spacer
------atccgagaccgagaccgataccgataccgata	Protospacer
        **************** ***** *

187. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NZ_MK169211 (Escherichia coli strain DUK14-2 plasmid pMOO-32, complete sequence) position: , mismatch: 10, identity: 0.688 

cgtcactaccgagaccgagaccgagaccgaga------	CRISPR spacer
------atccgagaccgagaccgataccgataccgata	Protospacer
        **************** ***** *

188. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NZ_CP016838 (Salmonella enterica subsp. enterica serovar Senftenberg strain 775W (ATCC 43845) plasmid pSSE-ATCC-43845, complete sequence) position: , mismatch: 10, identity: 0.688 

cgtcactaccgagaccgagaccgagaccgaga------	CRISPR spacer
------atccgagaccgagaccgataccgataccgata	Protospacer
        **************** ***** *

189. spacer 3.29|965397|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NZ_CP045074 (Paracoccus kondratievae strain BJQ0001 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688 

cgtcactaccgagaccgagaccgagaccgaga	CRISPR spacer
cgccacaaccgagaccgagaccgggctgcgcg	Protospacer
**.*** ****************.* .  . .

190. spacer 3.30|965458|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NZ_CP020539 (Sphingobium herbicidovorans strain MH plasmid pMSHV, complete sequence) position: , mismatch: 10, identity: 0.688 

ccgctgacgcactggatcaacctgacgcaacg	CRISPR spacer
aatctgacgcacttgatcaacctggcgtttga	Protospacer
   ********** **********.**.   .

191. spacer 3.31|965519|32|NZ_CP045947|CRISPRCasFinder,CRT matches to LN681539 (Clostridium phage phiCD505, complete genome) position: , mismatch: 10, identity: 0.688 

ttgcagggcgatattgttgttggtgaatggga	CRISPR spacer
agtgaaaatgatattgttgttgaggaatggga	Protospacer
    *....*************. ********

192. spacer 3.31|965519|32|NZ_CP045947|CRISPRCasFinder,CRT matches to JX145341 (Clostridium phage phiMMP02, complete genome) position: , mismatch: 10, identity: 0.688 

ttgcagggcgatattgttgttggtgaatggga	CRISPR spacer
agtgaaaatgatattgttgttgaggaatggga	Protospacer
    *....*************. ********

193. spacer 3.31|965519|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NC_011398 (Clostridium phage phiCD27, complete genome) position: , mismatch: 10, identity: 0.688 

ttgcagggcgatattgttgttggtgaatggga	CRISPR spacer
agtgaaaatgatattgttgttgaggaatggga	Protospacer
    *....*************. ********

194. spacer 3.31|965519|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NC_048642 (Clostridium phage CDKM9, complete genome) position: , mismatch: 10, identity: 0.688 

ttgcagggcgatattgttgttggtgaatggga	CRISPR spacer
agtgaaaatgatattgttgttgaggaatggga	Protospacer
    *....*************. ********

195. spacer 3.31|965519|32|NZ_CP045947|CRISPRCasFinder,CRT matches to KX228400 (Clostridium phage CDKM15, complete genome) position: , mismatch: 10, identity: 0.688 

ttgcagggcgatattgttgttggtgaatggga	CRISPR spacer
agtgaaaatgatattgttgttgaggaatggga	Protospacer
    *....*************. ********

196. spacer 3.40|966068|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NZ_AP022571 (Mycolicibacterium poriferae strain JCM 12603 plasmid pJCM12603, complete sequence) position: , mismatch: 10, identity: 0.688 

ccacgttcggcgatgttggccccatcggtcca	CRISPR spacer
actcgttcggcgatgtggcccccatccaggtg	Protospacer
 * ************* * ******* .  ..

197. spacer 4.9|966782|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 10, identity: 0.688 

aggggcgttccgcagtcgacaagggctgaaaa	CRISPR spacer
ccgggcggtccgcagtcgacgagggtgaggga	Protospacer
  ***** ************.****. ....*

198. spacer 4.9|966782|32|NZ_CP045947|CRISPRCasFinder,CRT matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 10, identity: 0.688 

aggggcgttccgcagtcgacaagggctgaaaa	CRISPR spacer
ccgggcggtccgcagtcgacgagggtgaggga	Protospacer
  ***** ************.****. ....*

199. spacer 2.3|947589|32|NZ_CP045947|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054036 (Rhizobium sp. JKLM13E plasmid pPR13E05, complete sequence) position: , mismatch: 11, identity: 0.656 

ccggcatcagcgccgatccgttcatagtgccc	CRISPR spacer
ttccgatcagcgccgatccgctcctagtctat	Protospacer
..   ***************.** **** . .

200. spacer 2.3|947589|32|NZ_CP045947|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022568 (Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK04, complete sequence) position: , mismatch: 11, identity: 0.656 

ccggcatcagcgccgatccgttcatagtgccc	CRISPR spacer
ttccgatcagcgccgatccgctcctagtctat	Protospacer
..   ***************.** **** . .

201. spacer 3.9|965396|33|NZ_CP045947|PILER-CR matches to NC_019201 (Streptomyces sp. x4(2010) plasmid pTSC1, complete sequence) position: , mismatch: 11, identity: 0.667 

gcgtcactaccgagaccgagaccgagaccgaga------	CRISPR spacer
------cacgcgagactgagaccgagactgagaccgagc	Protospacer
      *   ******.***********.****

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1127483 : 1153273 29 Escherichia_phage(37.5%) transposase,integrase attL 1127419:1127478|attR 1152831:1153652
DBSCAN-SWA_2 1233718 : 1309116 88 Salmonella_phage(43.1%) tail,tRNA,portal,protease,lysis,holin,transposase,head,capsid,integrase,terminase attL 1225799:1225815|attR 1314963:1314979
DBSCAN-SWA_3 1662700 : 1692173 32 Salmonella_phage(38.46%) tail,holin,protease NA
DBSCAN-SWA_4 1764225 : 1773396 10 Enterobacteria_phage(66.67%) tRNA NA
DBSCAN-SWA_5 1841704 : 1852210 10 Enterobacteria_phage(37.5%) NA NA
DBSCAN-SWA_6 1938204 : 1988891 71 Salmonella_phage(80.3%) tail,portal,plate,protease,holin,head,capsid,integrase,terminase attL 1932782:1932796|attR 1948912:1948926
DBSCAN-SWA_7 2092935 : 2099744 11 Salmonella_phage(33.33%) tail,integrase attL 2095145:2095167|attR 2104860:2104882
DBSCAN-SWA_8 2886278 : 2977195 91 Salmonella_phage(58.7%) tail,tRNA,protease,lysis,holin,integrase,terminase attL 2910372:2910391|attR 2974268:2974287
DBSCAN-SWA_9 3027258 : 3035990 7 Enterobacteria_phage(14.29%) transposase,protease NA
DBSCAN-SWA_10 3654560 : 3666562 14 Enterobacteria_phage(33.33%) integrase attL 3645128:3645141|attR 3663788:3663801
DBSCAN-SWA_11 4501323 : 4545187 63 Shigella_phage(44.07%) tail,tRNA,portal,plate,protease,holin,head,capsid,integrase,terminase attL 4503457:4503471|attR 4506863:4506877
DBSCAN-SWA_12 4571636 : 4592056 26 Burkholderia_phage(45.0%) tail,plate NA

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage