CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP045767	Pseudomonas sp. CFSAN084952 chromosome, complete genome	9 crisprs	csa3,DEDDh,DinG,cas3,WYL	0	1	10	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP045767_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045767_1

147604-147769

Orphan

Consensus_repeat	Method
GCTGAGTTCGGATTCCGAACCCAG	CRISPRCasFinder
GCTGAGTTCGGATTCCGAACTCAG	CRT
GCTGAGTTCGGATTCCGAACTCAG	PILER-CR

3 spacers

The CRISPR arrays of NZ_CP045767_1

>merge|NZ_CP045767|1|147604-147769|CRISPRCasFinder,CRT,PILER-CR
TATGAGTTCGGATTCCGAACTGAGTCCGAACTCAGTGATTTACGGCTGAGTTCGGATTCCGAACCCAGCTCAAAAGCGATTCGCTTATCGTTGGATTCGCTGAGTTCGGATTCCGAACTCAGGGTGGAGGCAGCTATATTTTGCTGAGTTCGGATGCCGAACTCGG

>NZ_CP045767|1|1|147604-147769|CRISPRCasFinder
TATGAGTTCGGATTCCGAACTGAG	TCCGAACTCAGTGATTTACG
GCTGAGTTCGGATTCCGAACCCAG	CTCAAAAGCGATTCGCTTATCGTTGGATTC
GCTGAGTTCGGATTCCGAACTCAG	GGTGGAGGCAGCTATATTTT
GCTGAGTTCGGATGCCGAACTCGG

>NZ_CP045767|1|1|147604-147769|CRT
TATGAGTTCGGATTCCGAACTGAG	TCCGAACTCAGTGATTTACG
GCTGAGTTCGGATTCCGAACCCAG	CTCAAAAGCGATTCGCTTATCGTTGGATTC
GCTGAGTTCGGATTCCGAACTCAG	GGTGGAGGCAGCTATATTTT
GCTGAGTTCGGATGCCGAACTCGG

>NZ_CP045767|1|1|147648-147769|PILER-CR
GCTGAGTTCGGATTCCGAACCCAG	CTCAAAAGCGATTCGCTTATCGTTGGATTC
GCTGAGTTCGGATTCCGAACTCAG	GGTGGAGGCAGCTATATTTT
GCTGAGTTCGGATGCCGAACTCGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045767.1\|WP_153649461.1\|148435_149143_-\|DUF2857-family-protein	unknown	unknown	gnl\|CDD\|378591
NZ_CP045767.1\|WP_056791344.1\|154483_154702_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|271309
NZ_CP045767.1\|WP_153649454.1\|144088_144241_-\|CrpP-family-protein	unknown	unknown	unknown
NZ_CP045767.1\|WP_153649457.1\|145320_145860_-\|DUF3158-family-protein	unknown	unknown	gnl\|CDD\|314329
NZ_CP045767.1\|WP_153649451.1\|138100_140056_-\|ATP-dependent-helicase	unknown	unknown	gnl\|CDD\|350677
NZ_CP045767.1\|WP_153649462.1\|149170_150949_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|213858
NZ_CP045767.1\|WP_153649468.1\|155401_156103_-\|DUF2786-domain-containing-protein	unknown	unknown	gnl\|CDD\|378525
NZ_CP045767.1\|WP_153649463.1\|151216_152218_-\|nucleoid-associated-protein-YejK	unknown	unknown	gnl\|CDD\|178993
NZ_CP045767.1\|WP_153649467.1\|154691_155405_-\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|379158
NZ_CP045767.1\|WP_153649456.1\|144849_145305_-\|single-stranded-DNA-binding-protein	unknown	unknown	gnl\|CDD\|169261
NZ_CP045767.1\|WP_153649450.1\|136795_137935_-\|pilus-assembly-protein-PilL	unknown	unknown	gnl\|CDD\|163460
NZ_CP045767.1\|WP_153649458.1\|145865_146591_-\|TIGR03761-family-integrating-conjugative-element-protein	unknown	unknown	gnl\|CDD\|274771
NZ_CP045767.1\|WP_153649452.1\|140052_141933_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379539
NZ_CP045767.1\|WP_153649466.1\|153137_154487_-\|replicative-DNA-helicase	unknown	unknown	gnl\|CDD\|273206
NZ_CP045767.1\|WP_153649455.1\|144302_144746_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045767.1\|WP_153649453.1\|142041_143946_-\|type-I-DNA-topoisomerase	unknown	unknown	gnl\|CDD\|223624
NZ_CP045767.1\|WP_153649459.1\|146598_147012_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045767.1\|WP_153649465.1\|152453_152975_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045767.1\|WP_020303012.1\|150945_151182_-\|Arc-family-DNA-binding-protein	unknown	unknown	gnl\|CDD\|367702
NZ_CP045767.1\|WP_153649464.1\|152217_152457_-\|type-II-toxin-antitoxin-system-HicA-family-toxin	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP045767.1\|WP_153649461.1\|148435_149143_-\|DUF2857-family-protein	gnl\|CDD\|378591	pfam11198, DUF2857, Protein of unknown function (DUF2857). This is a bacterial family of uncharacterized proteins.	7.51514e-57
NZ_CP045767.1\|WP_153649457.1\|145320_145860_-\|DUF3158-family-protein	gnl\|CDD\|314329	pfam11358, DUF3158, Protein of unknown function (DUF3158). Some members in this family of proteins are annotated as integrase regulator R however this cannot be confirmed. This family of proteins with unknown function appear to be restricted to Proteobacteria.	2.65901e-75
NZ_CP045767.1\|WP_153649451.1\|138100_140056_-\|ATP-dependent-helicase	gnl\|CDD\|350677	cd17919, DEXHc_Snf, DEXH/Q-box helicase domain of DEAD-like helicase Snf family proteins. Sucrose Non-Fermenting (SNF) proteins DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	4.6327e-40
NZ_CP045767.1\|WP_153649462.1\|149170_150949_-\|transcriptional-regulator	gnl\|CDD\|213858	TIGR03764, ICE_PFGI_1_parB, integrating conjugative element, PFGI_1 class, ParB family protein. Members of this protein family carry the ParB-type nuclease domain and are found in integrating conjugative elements (ICE) in the same class as PFGI-1 of Pseudomonas fluorescens Pf-5.	1.2078e-145
NZ_CP045767.1\|WP_153649463.1\|151216_152218_-\|nucleoid-associated-protein-YejK	gnl\|CDD\|178993	PRK00378, PRK00378, nucleoid-associated protein NdpA; Validated.	0
NZ_CP045767.1\|WP_153649467.1\|154691_155405_-\|HNH-endonuclease	gnl\|CDD\|379158	pfam13392, HNH_3, HNH endonuclease. This is a zinc-binding loop of Fold group 7 as found in endo-deoxy-ribonucleases and HNH nucleases.	1.42754e-11
NZ_CP045767.1\|WP_153649456.1\|144849_145305_-\|single-stranded-DNA-binding-protein	gnl\|CDD\|169261	PRK08182, PRK08182, single-stranded DNA-binding protein; Provisional.	1.7252e-66
NZ_CP045767.1\|WP_153649450.1\|136795_137935_-\|pilus-assembly-protein-PilL	gnl\|CDD\|163460	TIGR03748, conj_PilL, conjugative transfer region protein, TIGR03748 family. This model describes the conserved N-terminal region of a variable length protein family associated with laterally transfered regions flanked by markers of conjugative plasmid integration and/or transposition. Most members of the family have the lipoprotein signal peptide motif. A member of the family from a pathogenicity island in Salmonella enterica serovar Dublin strain was designated PilL for nomenclature consistency with a neighboring gene for the pilin structural protein PilS. However, the species distribution of this protein family tracks much better with markers of conjugal transfer than with markers of PilS-like pilin structure. [Mobile and extrachromosomal element functions, Plasmid functions].	1.61963e-54
NZ_CP045767.1\|WP_153649458.1\|145865_146591_-\|TIGR03761-family-integrating-conjugative-element-protein	gnl\|CDD\|274771	TIGR03761, ICE_PFL4669, integrating conjugative element protein, PFL_4669 family. Members of this protein family, such as PFL4669, are found in integrating conjugative elements (ICE) of the PFGI-1 class as in Pseudomonas fluorescens.	2.81438e-109
NZ_CP045767.1\|WP_153649452.1\|140052_141933_-\|hypothetical-protein	gnl\|CDD\|379539	pfam14284, PcfJ, PcfJ-like protein. The PcfJ-like protein family includes the E. faecalis PcfJ protein, which is functionally uncharacterized. It is found in bacteria and viruses, and is typically between 159 and 170 amino acids in length. There is a conserved HCV sequence motif.	0.000330465
NZ_CP045767.1\|WP_153649466.1\|153137_154487_-\|replicative-DNA-helicase	gnl\|CDD\|273206	TIGR00665, DnaB, replicative DNA helicase. This model describes the helicase DnaB, a homohexameric protein required for DNA replication. The homohexamer can form a ring around a single strand of DNA near a replication fork. An intein of > 400 residues is found at a conserved location in DnaB of Synechocystis PCC6803, Rhodothermus marinus (both experimentally confirmed), and Mycobacterium tuberculosis. The intein removes itself by a self-splicing reaction. The seed alignment contains inteins so that the model built from the seed alignment will model a low cost at common intein insertion sites. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP045767.1\|WP_153649468.1\|155401_156103_-\|DUF2786-domain-containing-protein	gnl\|CDD\|378525	pfam10979, DUF2786, Protein of unknown function (DUF2786). This family of proteins has no known function.	1.71511e-07
NZ_CP045767.1\|WP_153649453.1\|142041_143946_-\|type-I-DNA-topoisomerase	gnl\|CDD\|223624	COG0550, TopA, Topoisomerase IA [DNA replication, recombination, and repair].	3.10313e-175
NZ_CP045767.1\|WP_056791344.1\|154483_154702_-\|hypothetical-protein	gnl\|CDD\|271309	cd14776, HmpEc-globin-like, Globin domain of Escherichia coli flavohemoglobin (Hmp) and related proteins. Flavohemoglobins (flavoHbs) function primarily as nitric oxide dioxygenases (NODs, EC 1.14.12.17), converting NO and O2 to inert NO3- (nitrate). They have an N-terminal globin domain and a C-terminal ferredoxin reductase-like NAD- and FAD-binding domain, and use the reducing power of cellular NAD(P)H to drive regeneration of the ferrous heme. They protect from nitrosative stress (the broad range of cellular toxicities caused by NO), and modulate NO signaling pathways. This subfamily includes Vibrio fischeri Hmp and E.coli Hmp. NO scavenging by flavoHb affects the swarming behavior of Escherichia coli, and protects against NO during initiation of the squid-Vibrio symbiosis. E.coli Hmp can catalyze the reduction of several alkylhydroperoxide substrates into their corresponding alcohols using NADH as an electron donor, and it has been suggested that it participates in the repair of the lipid membrane oxidative damage generated during oxidative/nitrosative stress.	0.00678829
NZ_CP045767.1\|WP_020303012.1\|150945_151182_-\|Arc-family-DNA-binding-protein	gnl\|CDD\|367702	pfam03869, Arc, Arc-like DNA binding domain. Arc repressor act by he cooperative binding of two Arc repressor dimers to a 21-base-pair operator site. Each Arc dimer uses an antiparallel beta-sheet to recognize bases in the major groove.	1.13539e-06

>NZ_CP045767.1|WP_153649459.1|146598_147012_-|hypothetical-protein
MIDVATSPSDVGHITQPRPMIDVATSPSDVGHITPPGSEIGVGSELGDSARITQPRYQIGWCIELGVAARNTQPRSKTDGGTQPRSDKNDVTQAVGPPRLFLYIDASTNPLPSDYGFIAASVAAQLQHGHVNPLSKE
>NZ_CP045767.1|WP_153649458.1|145865_146591_-|TIGR03761-family-integrating-conjugative-element-protein
MADNYRLNIGSLRSDVKLTLHTHHAARIWMGRPKNDVKVGIIGLSGFCTVVNRMSRGAQQDDPYSDWWMIQLEEKIRDSKEALKTIEDRLDTAMASLPPAISISENLSIQPVSLPLYIANPLGFQAVYLLTNYDEIVRRILLAQHVGLVGRHDMETWIDEGAAVLRRLFGLAQIYKYSGAARDDFAANNAKAEAARKMYERYGELPQDILEGTRRSNFAPPIIRGQQQSEASDHFDDAEEG
>NZ_CP045767.1|WP_153649457.1|145320_145860_-|DUF3158-family-protein
MGQTSSEDGVLQQTAFRPLQQDAFQRLQQAASLKGLLKPFKGKGELSQFADLCRVQESELKALAQEVLSQARRYPFTLVPVRLTEQNTQAGTQFLRWQQVTDRRMGVGVWADMMGSSRTPETMLQDLYAMELQRITLNMQMSLMHSIAKQAAECAEKMGQAEAVYTARLQQLTNQTQHP
>NZ_CP045767.1|WP_153649456.1|144849_145305_-|single-stranded-DNA-binding-protein
MSTPVQGWEGNIGSTPEFKEFPNGNKDPRRLMRVNVYFDNSIPDGKGGFEDRGGFWANVEWWHKDAEHYSHLFQKGMRVIVSGRAVMDRWEKDGEENAALKVQASRVAILPHRIASVTLSPSQSQGSPSRDQSSPQPVPDFEDYPDPDRPF
>NZ_CP045767.1|WP_153649455.1|144302_144746_-|hypothetical-protein
MRDDDEVRCPDGWLLVAADHPTLGRLYWRYCDESDVNAADFYGITDNIRLASWIKAGWRDKDVWADDYSDMNSFVARRFIQELLNPDRHDTNYFELFNWDDESEDLELYGDLHDLQRRSGQSVEFFVHWLRAANWFDIPAPGCNTLP
>NZ_CP045767.1|WP_153649454.1|144088_144241_-|CrpP-family-protein
MGDNAFLPKTSDKRSCNNPHLTVIATGAAAARKGLRVYDCPYQHPAMGAS
>NZ_CP045767.1|WP_153649453.1|142041_143946_-|type-I-DNA-topoisomerase
MKLLIIEAPGKLKKLQPMMKKLRPGEDWQVVASGGHIRDLPAKGQDDSMITTGVRKNYTPVYEILDKSARAVKTIKAAAKQASEIYLATDPDREGESISWHIQQVLAVKNYKRITFNEITLKRVEEALANPRQIDLNRVASQECRRVLDRLVGYLVTQELRRLMGKPTSAGRVQSPAVFLVVLREREIRNFQVINHFGVRLFFADVSRGTTWFAEWQPVPDFASKDFPYVQDSNLAQHVAGTRNVVVESCEDRKAERHPPAPFISSTLQQAASNALKWDPDKTMQVAQRLYEQGVITYHRTDNPNVPDEAMEDIRTVANALGMKVVNERRTFKAAEGAQEGHPAITPTYWSERSAGENDDELALYKLIWARALASQLEAAIYDVRTAKLLAVGPGGKALRFTASGKTLCHPGWLKLLKGDDTDEDEDAEANNPVPALSPKQILAVHSGELLKKKTQPPSRYTKASLIKEMERRGIGRPSTFASILKNITSKGLIEEKSRKLVPAPLGEETIAKLEGFFSFVELDFTRELERDLDKIAQGQDTYGAVVARLHKRLEEELSQQHGMPSVPMSSGSRPAVATGDFNCPKCNQPLVRRQKKGDGGYDFWGCTGFKSNGCKVSFPTLNGKPDLKKPRGM
>NZ_CP045767.1|WP_153649452.1|140052_141933_-|hypothetical-protein
MSVQKRQSVLGLRILAPKLEKFSDRQIEVAQTWALHFQISHSLLTSFIEHYLNSNVHSRCWCVAWDSTNAQTRQVLARIGNQLQYFDGQQLMACKIVTKDRVHKKKPSVQVAQQLVMRFKGRWFADVLLTSFCKSARAAAVALAVEDLGSFIRKGSDASVSNNRYFNPRTQFYLKQIGSTLKQYRQCLDQELLFAIRSAQCPSPKLYNWLAQGDRTRRMQALKAQPVLVPLLVLANQWPWPWDEEQKIFLESPWNELQEFRPILCDDDYYVESRECLMGRITDTGLPLIDILAWLLQAPRTSVRYLGQQRVYDTGSALTRINREGPETPWHRLLLGASMVNRRPSTKTHWKTFFALLDKIPYQLLEQTKDWSRLFSGCPTEWSNPDWLQIADRLQDLNDVFNSVDESDGPDARDALQKINSFIGTATYHQIANLVDGFHLALIDIREALDAADPQTKADSSTPWKTLLNSNDTLLVSPNGLQIVELKCPADLDAEHRALGHCIDGYDYSAYRGNCRLFSVRENGQSLASAEVQLDESAWGEAPAKLTPKHLVTTQLRGLGNRTPKSGSRVDRAYQWFWAKVKSGELEVNLEWPDQTLSMSRYTNRNRKKLHAQACAEWINLRLSRT
>NZ_CP045767.1|WP_153649451.1|138100_140056_-|ATP-dependent-helicase
MSRPRLMNRQQDLVEKVIFDGYDFGILLQYVEGANRLFLERDGFYIRRAEHPKHRYWRMPKGKLLDDLDLLFHRLMELTESRFNESWQTFSSKLAAAQKSPDRQAFTWGLTFRIAPLAQGGILLSGDYHPGAVAVSRRMHGVFLGQSKSWRIDSTAELVRSNLILELGLSEDQFEILDTVQELLTDGSIVPADEVTRISLGGPPQERAAPVGHEDVSTDVYLAAVPSIQRTEFTSEQIDQALTGHSLLDHQPAGIRHLLQRTSALLADDMGLGKTRQAIIAAAIRAGDGPILVITLSTLIINWQREIQMVYPEARIGLQVFDPSLQWTIINYERLGDYVLQAGHFEVMIIDEAHRLKEPTAAWTRHGFDIAAKVPNRYLLTGTPVLNRESELHTLLRLSGHPVGKLSLKEFCEQFAGSPEFRKNLREAIGDWMLRRRKDVLTELKGKQRQTLPVELSVEERREYDRIRLEDRPSLARLGSLRQLLEQVKVRVVMELLCELDVEDKVILFCEFKDTVSTLRAQCEKAEYGCVTVVGSDSLGKRQKAIDRFQSDPDTRVFAATTSAAGTGNNLTAANYVMFLGLPWTPGLQDQAEDRAYRNGQLRMVVVKIPLVENTIDQMLWQMLLDKRQLASDLIEPDAAANARSELVNYL
>NZ_CP045767.1|WP_153649450.1|136795_137935_-|pilus-assembly-protein-PilL
MIRHFTTLSLLALVASCATHTPQTPKPAFDSSRNPDMLTPDLYPSGAVPEKEPVVRYGRYTLVSTLPDSGQRDLMAQIIDISIPANMHPNVRDAMQYVVDRSGYTLCSPDTGHVNILYTRPLPAAQYKLGPMTLRNTLQVLAGPAWQVKVDEVNRQVCYVLRPGYQLPETSRTAPTQVAAISVPPTPSAAATPKNTTSGETPSTVVVAAVPSPAPIKTAPAAPADATPVSTPAVPAKDGSITTSSGKSTSSPAATSPINASTTQPASIGKSGNVASSTSVAPKPALAVVTAPKPLAQIWTATTGSTLRQTVEAWAARAKWTLIWKVDDLDYPIDAPLRFEGSFEEAIKEIFPLYDSAPRSFVVDGSPAQLVLYIAERKK
>NZ_CP045767.1|WP_153649461.1|148435_149143_-|DUF2857-family-protein
MSKTPINEAILSQVLHHMRNGQLRRCIEMGLEPEILAQLQQPSVLSLLLNTPVSWCSVTIDGDMVKKLLTGAQRSDEEVRMIERALRLGATTQMLQQFFGLSPQDVALQRLVIGVTARRGRWREFSEEMDAQLWYRWTHLMKEHQVELDDSLALLDVAMLVAEELNAPQGADSTEGTETLSLAIIWHRVQSWIRDGLYPPSHPNAGFTKGLKLVSSANHQLALPVVTMGQGDNDL
>NZ_CP045767.1|WP_153649462.1|149170_150949_-|transcriptional-regulator
MKPSLAQSMKEKLQLPGFESKSPAAARLSDPIVDTPMLLTLDETLPYDENPRTTRNPKYDDIKESIRQRGLDTPPPVTRKPGEEKFRIRNGGNTRLAILNELYRETGDEKFFRFHCLFRPWDAVRGEIISLTGHLAENDLQGQLLFIERAIGVDKARALYEEEAGESISQRELVRRLAADGYPVSQPHISRMQDTIRYLLPVVPALLYSGLGFDRITKLLGLRKSALQCWERNYQEHEKTPSLEFETVFQDVLSQFEGDAEEFLFQRFQDELIAQLQKPLHLGYEKILLEITQNQDQLRRSTPILELPQPTITFGSVPQGVSTTEGGNNPPQNPAQQSSAPQTGGTIQTSTTQQISKEPSKPQLTPPPLEQMSPEEQKSRLDGHVASPVKTSARVEKMKREVAALDGEILPDFAANALVAIPVQAGGLNPISDLWYIEREIDNPVTLRQHIAQLAREVASSVKAPGEFLDVNGGVGFSYRHPSEDVEVTATAQHTLTLLQSLSGSIAIALKMIQQQPELQAEQAGSLADFEFAAGLGQILLGQPSAKDQSPENENRLGDGALVKLFRIIRLARRLIDLEIKSMANNGPNSLS
>NZ_CP045767.1|WP_020303012.1|150945_151182_-|Arc-family-DNA-binding-protein
MSNETKRQLEEKFVVRLPDGMRERIALQARENTRSMNSEIVHRLEATAGLEAALDRAHKIIDQLLAAAPANEQAGARV
>NZ_CP045767.1|WP_153649463.1|151216_152218_-|nucleoid-associated-protein-YejK
MPIRHCIVHLIDKKPDGTPAVLHASQHELANSQALENMLSDFNEAYNAKQGKAWGFFHTESGAHPFSGWLKMYFDGNQDFTQFSLEAVEHLQRLMEESNLSTGGHVLFTHYQQGMTDYLAIALLHHREGVTVTDDLDVSPSRHLDLGQLHLAARINVSEWQKNKQSKQYISFIKGKSGKKFSEYFRDFIGCQEGVDGPGETRTLLKAFSDFVESEDLPNESAREKTKTLVDYASSQAKLGEPMGLEELSSLIDEDRPKAFYDHIRNKDYGLSPEIPADKRTLNQFRRFTGRAEGLSIRFEAHLLGNKIEYDEASSTLTIKGLPTQLSDQLKRR
>NZ_CP045767.1|WP_153649464.1|152217_152457_-|type-II-toxin-antitoxin-system-HicA-family-toxin
MNASRLRGQHENLRHLVEFAEANGWTVSRTHGGHIKFTKAGLGSIYTSSTSSDHRSGLNAKARLRRADRTQSQRTQDAI
>NZ_CP045767.1|WP_153649465.1|152453_152975_-|hypothetical-protein
MHSNASLFPSIHAGAGFEASAVVHAYKTGINPVELDALAQAIGRLTRDHSTVVPLSMRGDLLEFQKLGYIEVSETASSTLTVELLCAGALLSSYFWSVWVPRHLQSCSLKVAVMSHLQHPEPVQHCSVVFRVPGAREATRHFLHELGTKFPGDQAEIIAIQAGNVLADKDVDQ
>NZ_CP045767.1|WP_153649466.1|153137_154487_-|replicative-DNA-helicase
MNHLDLSPPHSVEAEQGVLGGLLLDNNAWDLVADKLEYSDFFRHDHRLLFETIASLADKAIPFDIVTVHDALKNPDQAGGLAYLAELAKNTPSVANIEHYAFIVRNRSQLRQLMSLGYQCSREATDPQADATEVQESIEQQLFALGEGKSASEFVNINKCLTAVVEQIDEHFNGDVVVTGVPSGLDDLDEMTSGFQEADLIILGARPSMGKTSLALNFVDTALQAKPDRTVQVFSMEMPAKALLYRLMAILGHLDLGKLLKGRLDDEDWPKLTAAVSRINSYGERLVIDDSSGLTPGAIRAKSRRAARRFGHPSLILIDYLQLMRCPGQENRANEISAISQALKALAKEMNCPVVALSQLNRELERRPNKRPINADLRDSGAIEQDADVIMFVYRDEKYHPETEHKGIAEIIIGKARNGPTGTVRTAFIPHQTRFANLSANSGWQGVQP
>NZ_CP045767.1|WP_056791344.1|154483_154702_-|hypothetical-protein
MKNKIEDLRNHLFATIEGLLDPDKPMELDRAKAVAEVAQVMINSAKVEVAMVKALDAVSGSGFMQIGQEPLK
>NZ_CP045767.1|WP_153649467.1|154691_155405_-|HNH-endonuclease
MTRQCLSPLAKATLEHARSQLGLMPVQKHHIWSEAEERMLIARYPNETTQALADEIGLSVYQVYAKAKRLGISKSAEFLSSNLCGRFDGSSGTEHRFAKGMTPWNKGVKGLPSLGRMATTQFKAGNRPENWLPVGSLRTTPDGYQQRKITDTGYPPVDWQGVHILLWEEHYGPVPINQCVCFKDGNKAHIALDNLELLTRAERMRRNTIHRYPEELKTLIRAVGKLNRTIREAEHEK
>NZ_CP045767.1|WP_153649468.1|155401_156103_-|DUF2786-domain-containing-protein
MMDKQRVLEKVAKCFALANSNGASPNEVETALRQARNLMKQYNLEAIEVAAHTVDEASVATHTRRAPQDWLHLLAQTCARAFDCQHIAYYNPLQGWSFKFLGKGISPELTAHAYSALLHQLVAARREHVAQQKRCQLKTKRRRGALFAEGWINAVSYKVAEFAGSMDSETSKAISAYLEHHHPMLKTFEIQSREAKGHDTGSLTAGWKQGQNVRLHHGVGKTGHTALISGGGQ

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Crispr_ID: NZ_CP045767_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045767_2

930742-930840

Unclear

Consensus_repeat	Method
AGCTGGCTTGCCTGCGATGACGGCCTG	CRISPRCasFinder

1 spacers

cas3

The CRISPR arrays of NZ_CP045767_2

>merge|NZ_CP045767|2|930742-930840|CRISPRCasFinder
AGCTGGCTTGCCTGCGATGACGGCCTGCCAGCCGACACCTATCGATCTGATGCCCCGCGTTCAACCTGTGGGAGCTGGCTTGCCTGCGATGGCGGCCTG

>NZ_CP045767|2|2|930742-930840|CRISPRCasFinder
AGCTGGCTTGCCTGCGATGACGGCCTG	CCAGCCGACACCTATCGATCTGATGCCCCGCGTTCAACCTGTGGG
AGCTGGCTTGCCTGCGATGGCGGCCTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045767.1\|WP_153649484.1\|927353_929975_+\|type-I-DNA-topoisomerase	unknown	unknown	gnl\|CDD\|236048
NZ_CP045767.1\|WP_032903150.1\|934826_937517_-\|DEAD/DEAH-box-helicase	unknown	unknown	gnl\|CDD\|350770
NZ_CP045767.1\|WP_005786162.1\|931515_931989_-\|CDP-glycerol--UDP-pyrophosphoryl-N--acetylglucosaminyl-N-acetylmannosamine-glycerophosphotransferase	unknown	unknown	gnl\|CDD\|227691
NZ_CP045767.1\|WP_003189650.1\|925728_926904_+\|acetyl-CoA-C-acyltransferase-FadA	unknown	unknown	gnl\|CDD\|181592
NZ_CP045767.1\|WP_032873405.1\|941893_943357_+\|glyceraldehyde-3-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|236219
NZ_CP045767.1\|WP_020302894.1\|919976_921899_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|236861
NZ_CP045767.1\|WP_014717511.1\|931245_931479_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045767.1\|WP_014717515.1\|937526_938093_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371320
NZ_CP045767.1\|WP_003172575.1\|931999_932608_-\|transcriptional-repressor-LexA	unknown	unknown	gnl\|CDD\|234688
NZ_CP045767.1\|WP_014717512.1\|932871_933579_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380065
NZ_CP045767.1\|WP_003189651.1\|927002_927239_+\|DUF1653-domain-containing-protein	unknown	unknown	gnl\|CDD\|377930
NZ_CP045767.1\|WP_032903148.1\|938103_941553_-\|transcription-repair-coupling-factor	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|224118
NZ_CP045767.1\|WP_153649485.1\|932606_932768_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045767.1\|WP_032903154.1\|915972_917769_+\|ABC-transporter-ATP-binding-protein/permease	unknown	unknown	gnl\|CDD\|131259
NZ_CP045767.1\|WP_019818247.1\|922627_923065_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045767.1\|WP_019818244.1\|933714_934725_+\|beta-N-acetylhexosaminidase	unknown	unknown	gnl\|CDD\|235417
NZ_CP045767.1\|WP_014717508.1\|922081_922522_-\|universal-stress-protein	unknown	unknown	gnl\|CDD\|366180
NZ_CP045767.1\|WP_032903152.1\|923551_925699_+\|fatty-acid-oxidation-complex-subunit-alpha-FadB	unknown	unknown	gnl\|CDD\|183293
NZ_CP045767.1\|WP_003189653.1\|930194_930716_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045767.1\|WP_014717506.1\|917834_919763_-\|transglycosylase-SLT-domain-containing-protein	unknown	unknown	gnl\|CDD\|183236

Protein	Function_ID	Function_description	E-value
NZ_CP045767.1\|WP_153649484.1\|927353_929975_+\|type-I-DNA-topoisomerase	gnl\|CDD\|236048	PRK07561, PRK07561, DNA topoisomerase I subunit omega; Validated.	0
NZ_CP045767.1\|WP_032903150.1\|934826_937517_-\|DEAD/DEAH-box-helicase	gnl\|CDD\|350770	cd18012, DEXQc_arch_SWI2_SNF2, DEAQ-box helicase domain of archaeal and bacterial SNF2-related proteins. Proteins belonging to SNF2 family of DNA dependent ATPases are important members of the chromatin remodeling complexes that are implicated in epigenetic control of gene expression. The Snf2 family comprises a large group of ATP-hydrolyzing proteins that are ubiquitous in eukaryotes, but also present in eubacteria and archaea. Archaeal SWI2 and SNF2 are members of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	7.99157e-109
NZ_CP045767.1\|WP_003189650.1\|925728_926904_+\|acetyl-CoA-C-acyltransferase-FadA	gnl\|CDD\|181592	PRK08947, fadA, 3-ketoacyl-CoA thiolase; Reviewed.	0
NZ_CP045767.1\|WP_032873405.1\|941893_943357_+\|glyceraldehyde-3-phosphate-dehydrogenase	gnl\|CDD\|236219	PRK08289, PRK08289, glyceraldehyde-3-phosphate dehydrogenase; Reviewed.	0
NZ_CP045767.1\|WP_019818244.1\|933714_934725_+\|beta-N-acetylhexosaminidase	gnl\|CDD\|235417	PRK05337, PRK05337, beta-hexosaminidase; Provisional.	0
NZ_CP045767.1\|WP_014717515.1\|937526_938093_-\|hypothetical-protein	gnl\|CDD\|371320	pfam10972, CsiV, Peptidoglycan-binding protein, CsiV. CsiV, a small periplasmic protein (cell-shape integrity in Vibrio), is essential for growth of Vibrio cholerae in the presence of DAA, non-canonical amino-acids, the typical components of peptidoglycan side-chains in Vibrio cholerae. CsiV interacts with LpoA, the lipoprotein activator of penicillin-binding-protein1A that is necessary for mediating the assembly of peptidoglycan. CsiV acts through LpoA to promote peptidoglycan biogenesis in V. cholerae and other vibrio species as well as in the other genera where this protein is found.	5.91242e-36
NZ_CP045767.1\|WP_003172575.1\|931999_932608_-\|transcriptional-repressor-LexA	gnl\|CDD\|234688	PRK00215, PRK00215, transcriptional repressor LexA.	2.07254e-112
NZ_CP045767.1\|WP_014717512.1\|932871_933579_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|380065	pfam17939, TetR_C_30, Tetracyclin repressor-like, C-terminal domain. TetR family regulators are involved in the transcriptional control of multidrug efflux pumps, pathways for the biosynthesis of antibiotics, response to osmotic stress and toxic chemicals, control of catabolic pathways, differentiation processes, and pathogenicity. The TetR proteins identified in overm ultiple genera of bacteria and archaea share a common helix-turn-helix (HTH) structure in their DNA-binding domain. However, TetR proteins can work in different ways: they can bind a target operator directly to exert their effect (e.g. TetR binds Tet(A) gene to repress it in the absence of tetracycline), or they can be involved in complex regulatory cascades in which the TetR protein can either be modulated by another regulator or TetR can trigger the cellular response. TetR regulates the expression of the membrane-associated tetracycline resistance protein, TetA, which exports the tetracycline antibiotic out of the cell before it can attach to the ribosomes and inhibit protein synthesis. TetR blocks transcription from the genes encoding both TetA and TetR in the absence of antibiotic. The C-terminal domain is multi-helical and is interlocked in the homodimer with the helix-turn-helix (HTH) DNA-binding domain. This entry represents the C-terminal domain present in the Pseudomonas aeruginosa PsrA which regulates the fadBA5 beta-oxidation operon. Functional analysis of PsrA indicated its importance in regulating b-oxidative enzymes. It has also been suggested that PsrA, a member of the TetR family of repressors, could affect global gene expression including activation of rpoS.	1.13288e-24
NZ_CP045767.1\|WP_003189651.1\|927002_927239_+\|DUF1653-domain-containing-protein	gnl\|CDD\|377930	pfam07866, DUF1653, Protein of unknown function (DUF1653). This is a family of hypothetical bacterial proteins of unknown function.	6.03977e-35
NZ_CP045767.1\|WP_032903148.1\|938103_941553_-\|transcription-repair-coupling-factor	gnl\|CDD\|224118	COG1197, Mfd, Transcription-repair coupling factor (superfamily II helicase) [DNA replication, recombination, and repair / Transcription].	0
NZ_CP045767.1\|WP_032903154.1\|915972_917769_+\|ABC-transporter-ATP-binding-protein/permease	gnl\|CDD\|131259	TIGR02204, system_ATPase_and_permease_component, ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.	0
NZ_CP045767.1\|WP_005786162.1\|931515_931989_-\|CDP-glycerol--UDP-pyrophosphoryl-N--acetylglucosaminyl-N-acetylmannosamine-glycerophosphotransferase	gnl\|CDD\|227691	COG5404, SulA, SOS-response cell division inhibitor, blocks FtsZ ring formation [Cell division and chromosome partitioning].	2.75487e-32
NZ_CP045767.1\|WP_014717508.1\|922081_922522_-\|universal-stress-protein	gnl\|CDD\|366180	pfam00582, Usp, Universal stress protein family. The universal stress protein UspA is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. UspA enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae UspA reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, though UspA lacks ATP-binding activity.	8.09085e-35
NZ_CP045767.1\|WP_032903152.1\|923551_925699_+\|fatty-acid-oxidation-complex-subunit-alpha-FadB	gnl\|CDD\|183293	PRK11730, fadB, fatty acid oxidation complex subunit alpha FadB.	0
NZ_CP045767.1\|WP_020302894.1\|919976_921899_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|236861	PRK11147, PRK11147, ABC transporter ATPase component; Reviewed.	0
NZ_CP045767.1\|WP_014717506.1\|917834_919763_-\|transglycosylase-SLT-domain-containing-protein	gnl\|CDD\|183236	PRK11619, PRK11619, lytic murein transglycosylase; Provisional.	1.81968e-109

>NZ_CP045767.1|WP_003189653.1|930194_930716_+|hypothetical-protein
MANELYTRTNQKIYFAGLSLEALGRAEEGKEMNAIALVQAGREAALFHLYGALLGLCHEIAGFYRLPQAGAPRAEMIMNREVLDSMAIPELAELVEMAQSPDSWVARLLKAHADMFQPPRIPHVPKGDVTQPLIVAVALEQDEPKPLSREELEGWRQELKKMALRFREGLNEC
>NZ_CP045767.1|WP_153649484.1|927353_929975_+|type-I-DNA-topoisomerase
MGKSLVIVESPAKAKTINKYLGNEYVVKSSIGHIRDLPTSGSASASKEPAAKRGKAAAGEGPVLTPKEKARKQLVSRMGVDPDHGWKAKYEILPGKEKVIEELRRLAKDADTIYLATDLDREGEAIAWHLREAIGGDDSRYKRVVFNEITKKAIQEAFSKPGELDIDRVNAQQARRFLDRVVGYMVSPLLWAKIARGLSAGRVQSVAVKLVVEREREIRAFIPEEYWEVHADLGTAKGANVRFEVAREKGEAFKPLNEAQAMAALEKLKASSYSIVKREDKPTSSKPSAPFITSTLQQAASNRLGFGVKKTMMIAQRLYEAGYITYMRTDSTNLSQDAVAMARTYIESEFGKTYLPEKPNVYSSKEGAQEAHEAIRPSDANTTPAKLSGMERDAERLYELIWRQFLACQMLPAQYLSTTVSVGAGDFELRAKGRILKFDGYTRVMPQIAKPGDDDVLPDMAQGDTLKLIKLDPSQHFTKPPARYSEASLVKEMEKRGIGRPSTYAAIISTIQDRGYVALHNRRFYSEKMGDIVTERLSESFSNLMDYGFTAGMEENLDDVAQGERDWKNVLDEFYGDFKKKLEVAENPENGMRANQPVMTDIPCTTCGRPMQIRTASTGVFLGCSGYSLPPKERCKATVNLVPGDEIAADDEGESESLVLRGKHRCPICSTAMDAYLLDEKHKLHICGNNPDCNGYEIEEGTYRIKGYEGPSLECDKCGSEMQLKTGRFGKFFGCTNPTCKNTRKLLKSGDAAPPKMDPVKMPELKCEKVNDTYILRDGASGLFLAASQFPKNRETRAPLVMEIVPHKDEIDPKYHFLCEAPKKDPDGRPAVIRYSRKTKEQYVQTEVDGKPTGWKAFYDGGKWKVEDKRQGA
>NZ_CP045767.1|WP_003189651.1|927002_927239_+|DUF1653-domain-containing-protein
MKVEPGLYQHYKGPQYRVFSVARHSETEEEVVFYQALYGEYGFWVRPLSMFLETVEVDGEQVPRFALVTAEPSLFTGQ
>NZ_CP045767.1|WP_003189650.1|925728_926904_+|acetyl-CoA-C-acyltransferase-FadA
MSLNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKVLERNTKVDPNEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTAAGQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHMGHVSMMHGVDPNPHMSLYAAKASGMMGLTAEMLGKMHGITREAQDAFGLRSHQLAHKATVEGKFKDEIIPMNGYDENGFLKLFDYDETIRPDTTLESLAALKPAFNPKGGTVTAGTSSQITDGASCMIVMSAQRAQDLGIQPLAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLSISDIDFFELNEAFAAQALPVLKDLKVLDKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQNGGNLGVATMCIGLGQGISTVFERV
>NZ_CP045767.1|WP_032903152.1|923551_925699_+|fatty-acid-oxidation-complex-subunit-alpha-FadB
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDTIKADASVKGVIVSSGKDVFIVGADITEFVDNFKLPDAELVAGNLEANKIFSDFEDLNVPTVAAINGIALGGGLEMCLAADFRVMSATAKIGLPEVKLGIYPGFGGTVRLPRLIGADNAIEWIAAGKENKAEDALKVGAVDAVVAPDKLAEAALNLIKGAISGEFDYKAKRQPKLEKLKLNAIEQMMSFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAAQSLIGLFLNDQELKKKAKAYDEIAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQAVLAEVEAQVKDDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSELAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYEAKRLGQKNGKGFYAYEADKKGKQKKVADPSVHEVLAPVIYEQREVSDEDIINWMMIALCLETVRCLEDGIVETAAEADMGLVYGIGFPPFRGGALRYIDSIGVTEFVALADKYADLGPLYHPTAKLREMAKNGQSFFG
>NZ_CP045767.1|WP_019818247.1|922627_923065_+|hypothetical-protein
MTVWIVVSILAVVLSPLVWLRPSRQQSGRMALRMEARRIGLAMQLAPQEWPHWLKQEPPSPCAQYCRPRRGSAPATWSYWQLEPGLWVNQWREPCVDEKLLPHFATLPANVYKVEADKQMIALYWGEKGDASVLKDIDTLLKALA
>NZ_CP045767.1|WP_014717508.1|922081_922522_-|universal-stress-protein
MPYEHILVAVDLTEECDPVIKRAQESAIANGAKLSLVHIVEPMAMAFGGDVPMDLSQLQQQQFDQAKERLDRLILKYPHLKKEDCHLTYGQPRQEIHHLAKEKACDLIVVGSHGRHGLALLLGSTANDVLHGAPCDVLAVKLIKSP
>NZ_CP045767.1|WP_020302894.1|919976_921899_+|ATP-binding-cassette-domain-containing-protein
MTLLKFSDVSLAFGAMPLLDKVSWQIARGERVCIIGRNGTGKSSMMKLVKGDQKPDDGSVWRAPGLKIGELPQELPVADGRTVFDVVAEGLDGVGELLAQYHHLAQNCVTEEDLDKLMHVQQDLEARDGWRLQQLVDSTLSRLQLPADKTLAELSGGWRRRVLLAQALVSEPDLLLLDEPTNHLDIGAIAWLEEAIKDFQGAVLFITHDRAFLQSLATRILELDRGGLIDWNGDYASFLVHKEAALAAEETANALFDKKLAQEEVWIRQGIKARRTRNEGRVRALKALRVERSERRERTGKANIQLDTADKSGKQVMVLENVSFHHPDGPFLIKDFSMVLQRGDRIGLLGANGTGKTTLLKLMLSGLQPTSGKVEEGTRIDVAYFDQLRHQLDLEKTVIDNVAEGRDFIDIDGQSRHVLSYLGDFLFSPQRARTPVKALSGGERARLLLAKLFSKPANLLVLDEPTNDLDVETLELLEEVLLTFNGTVLMVSHDREFLDNVVTSTLVFEGEGKVREYVGGYQDWLRQGGSPRLLGVTESKSGKADLNTAVVAPAAAEAPAPAADAAPAKKKLSYKLQRELEALPGDIDAKEQQIAAVEAEMADAGFYLRPAAETAKVIASLETLNQELEALVERWAELDA
>NZ_CP045767.1|WP_014717506.1|917834_919763_-|transglycosylase-SLT-domain-containing-protein
MRSRLFNFLSCLLLSATAVQSAQAVDLTTQRQYYDQAKRALAKGDSGPYMQYSQALADYPLTPYLAYDELTARLKTASNEEIEQFLAKHGDLPQANWMKLRWLRWLAERGDWQTFEKYYDTKLNFVELDCLHGQYQLSHNLKAEGYKTAEKLWMTGKSQPAACDATFGQWAAAGQLTEQKIWERTKLAAEARNYALANSLVKTLPTLGAQGRLMVDVAQKPDMLSDPSRFQPATEAMSDAVGLGLRRLARQDPDKAMSLLDGYASSMHFSRDEKVSIAREIGLTLAKRFDPRALEVMTKYDPELRDNTVSEWRLRLLLRLARWEDAYQLTRKLPQDLATTNRWRYWQARSLELAEPKNPQALVLYKNVAKERDFYGFLAADRSKAPYQLNNKPLVMSQALVNKVRNTPGVRRALEFYARGQIVDGRREWYHVSRHFNRDEMVAQAKLAYDMKWYFPAIRTISQAQYWDDLDIRFPMAHRDTLVREAKVRGLHSSWIFAITRQESAFMDDARSGVGASGLMQLMPGTAKETARKFSIPLASPAQVLDPDKNIQLGAAYLSQVHSQFNGNRVLASAAYNAGPGRVRQWLRGADHLSFDVWVESIPFDETRQYVQNVLSYSVIYGQKLNSPQPLVDWHERYFDDQ
>NZ_CP045767.1|WP_032903154.1|915972_917769_+|ABC-transporter-ATP-binding-protein/permease
MFSIRQRRAIRLASRFIAPYRWQALGALLALIVTAGITLSMGQGIRLLVDQGFMTQSPHLLNQSIGLFMLLVLGLAVGTFTRFYLVSWIGERVVADIRRQVFNHLIYLHPGFYENNRSSEIQSRLTTDTTLLQSVIGSSLSLFLRNALMVIGGIVLLFITNPKLTSIVVVALPLVLAPILIFGRRVRSLSRLSQDRIADVGSYVAETLGQIKTVQAYNHQVQDEQRFAATVEDAFVTARKRILQRSWLITLVIMLVLGAVGVMLWVGGMDVISGRISGGELAAFVFYSLIVGSAVGTLSEVLGELQRAAGAAERIGELLQSGNEIQAPATGGVRLPERVSGRMELQDLRFSYPSRPDSYAIDGLNLTINPGETLALVGPSGAGKSTIFDLLLRFYDPQQGRILLEGQPLTELDPLDLRRHFALVSQSPALFFGSVEDNIRYGNPSATTAQVEAAARIAHAHDFILQMPDGYQTHLGESGQGLSGGQRQRLAIARALLVDAPILLLDEATSALDAQSEHLIQQALPQLMQGRTTLVIAHRLATVKNADRIAVMDQGKLVAVGTHQQLIASNPLYARLAALQFSADPVGGGLPPIAADQQ
>NZ_CP045767.1|WP_014717511.1|931245_931479_+|hypothetical-protein
MPTSFLEIVELPDGRIELRRAEDEGSLVILDFSEDAKVFLQGQHVEVAKAMLSVGVQMAGRLAEGEPEKDEGPRVLH
>NZ_CP045767.1|WP_005786162.1|931515_931989_-|CDP-glycerol--UDP-pyrophosphoryl-N--acetylglucosaminyl-N-acetylmannosamine-glycerophosphotransferase
MQLVHTPQHTQLSLFEAFMAQPLAPILKETVEAPWGGEPEAFSELSLRGAAESCLNLLAPILRELSEDQDARWLTLIAPPASLTQAWLRDAGLNRERILLLQPRGAQSAQQLTCEALRLGRSHTVVSWLNPLNASAKQQLISAARTGDAQSLNIRLG
>NZ_CP045767.1|WP_003172575.1|931999_932608_-|transcriptional-repressor-LexA
MLKLTPRQAEILAFIKRCLDDNGYPPTRAEIALELGFKSPNAAEEHLKALARKGAIEMTPGASRGIRIPGFEAKADESTLPIIGRVAAGAPILAQQHVEESCNINPTFFHPRADYLLRVHGMSMKDVGIFDGDLLAVHTTREARNGQIVVARIGDEVTVKRFKREGSKVWLLAENPEFAPIEVNLKDQDLVIEGLSVGVIRR
>NZ_CP045767.1|WP_153649485.1|932606_932768_+|hypothetical-protein
MLIALSFYTVTGIIYSELRLAIILFSGPAGRSSVNRPTEQKRRSLHSCKDVIK
>NZ_CP045767.1|WP_014717512.1|932871_933579_+|TetR/AcrR-family-transcriptional-regulator
MAQSETVERILDAAEQLFAEKGFAETSLRLITSKAGVNLAAVNYHFGSKKALIQAVFSRFLGPFCTSLDRELERRQAKADHKPSLEELLEILVEQALVVQPRSGNDLSIFMRLLGLAFSQSQGHLRRYLEDMYGKVFRRYMLLVNEAAPRIPPIELFWRVHFMLGAAAFSMSGIKALRAIAETDFGVNTSIEQVMRLMVPFLAAGMRAETGVSDPAMAAAQLRPRSKTVPVAAKV
>NZ_CP045767.1|WP_019818244.1|933714_934725_+|beta-N-acetylhexosaminidase
MTAALQGSLMVDVAGTWLTAEDRHLLRQPEVGGLIIFARNIEHPRQVRELSAAIRAVRPDLLLAVDQEGGRVQRLRQGFVRLPAMRALADNPNAEYLAEQCGWIMATEVLAVGLDLSFAPVLDLDYQRSAVVGTRAFEGDPERAAVLAGAFIRGMNSAGMAATGKHFPGHGWAEADSHVAIPNDERSLEQIRANDLVPFARLSKQLAAVMPAHVIYPQVDAQPAGFSRRWLQDILRGELQFDGVIFSDDLSMAGAHVVGDAASRIEAALTAGCDMGLVCNDRAAAELALSAAQRMKVTPSARIARMRGQAVASTDYKQDPRWLTALTALRDAQLID
>NZ_CP045767.1|WP_032903150.1|934826_937517_-|DEAD/DEAH-box-helicase
MPLTSSLTKPLAPSWANRFKEQSLERGRRYALENRVRIVECGDSTITASCEGSGGNVYRQTISLRESAKGLLILVDSRCTCPVHTNCKHIAAVLLKVQETLAYPAAAQDAQLLEKLQAVLENRVVLPQVVMDDVQPVPRLWLASVEFSAFEPRNGKMQRYIQHRAALSFNYLGNYVSGQKNADIIVRQETQSLRIKRHPEQEQAYREHLRLLGFKIATRQSKALPESAGELFEMVNDSAWLNFTLNVSPTLRAEGWELQIDEDFGFDLSPVDDWYATVDEGPERDWFDLELGIIVNGERLSLLPILLNLMRSHTEILNPEKLARRRDEELILVNIPGLPNGHGPLQVALPYGRLKPVLATLGEFYLQEAGTTALRLAKADAIRLNPLEDLPLQWEGGEKIRNFAQRLRDIKDFTCVAPEGLNATLRPYQLEGLSWMQSLRQLEVGGILADDMGLGKTLQTLAHILTEKNAGRLDRPCMVVMPTSLIPNWLDEAAHFTPQLRVQALYGAGRKKHFANLNDYDLLLTTYALLPKDIEQLAALPLHVLILDEAQYIKNPSSKAAQAARELNARQRLCLSGTPLENHLGELWSLFHFLLPGWLGDVKSFNRDYRVPIEKRASDVRLQHLNGRIKPFLLRRTKEQVATELPPKTEIIHWVDLNEAQRDVYETMRLAMDKKVRDEITRKGVARSQIIILEALLKLRQVCCDLRLVNDATLPARGSSSGKLDSLMDMLDELFAEGRRILLFSQFTSMLSLIEAELKKRGIAYALLTGQTRDRRTPVKDFQSGKLQIFLISLKAGGVGLNLTEADTVIHYDPWWNPATENQATDRAYRIGQEKPVFVYKMIARGTVEEKIQHLQKEKSDLAAGVLDGRTTGDWQLGNEEIEALFAPLPNKQEKR
>NZ_CP045767.1|WP_014717515.1|937526_938093_-|hypothetical-protein
MRVFRILSLLLVVLAPSAFADSLYQVEMILVRQNAEPVINSRAAPENWDAGAPRLGERMSPPRLGNIVDKLRADANYTVLAHKAWEQNLGEQAVKVAITDGQEQFGQFPIEGVLSLQLGRFTDIDADFWINQFDGNGSVIASEHLSQKDVRTKNNQLNYLDGGHLALLIKITSLTAKPPSAPPPDLQD
>NZ_CP045767.1|WP_032903148.1|938103_941553_-|transcription-repair-coupling-factor
MPVLRLPLLPAAAGKQHWGNLPGAALSLAIAEAASAAKRFTLLLTADSQSAERLEQELSFFAPDLPVLHFPDWETLPYDLFSPHQDIISQRIASLYRLPELAHGVLVVPITTALHRLAPTKFLLGSSLVLDVGQKLDVEQMRTRLEASGYRCVDTVYEHGEFAVRGALIDLFPMGSKLPYRIDLFDDEIETLRTFDPENQRSIDKVDSIKLLPAREFPLQKDAVTRFKARFRERFDVDFRRCPIFQDLSSGITPAGIEYYLPLFFDETSTLFDYLPQDTQVFSLPGIEQAAENFWNDVRNRYEERRVDPSRPLLPPAELFLPVEDCFARLKNWPRVIASQQDVDAGSGRERFPASALPDLAIQAKATQPLEALSNFLGDFPGRVLFTAESAGRREVLLELLERLKLRPKTVDSWPDFVASKERLAITIAPLDEGLRLDDPALALIAESPLFGQRVMQRRRREKRADANNDAVIKNLTELREGAPVVHIDHGVGRYLGLQTLEIDNQAAEFLTLEYAEGAKLYVPVANLHLIARYTGSDDALAPLHRLGSETWQKAKRKAAEQVRDVAAELLDIYARRAAREGYAFADPKADYATFSAGFAFEETPDQQTTIEAVRADMLAPKPMDRLVCGDVGFGKTEVAMRAAFIAVHGGRQVAILVPTTLLAQQHYNSFRDRFADWPVTVEVMSRFKSAKEVNAAVADLAEGKIDIVIGTHKLLSDDVKIKNLGLVIIDEEHRFGVRQKEQLKALRSEVDILTLTATPIPRTLNMAVSGMRDLSIIATPPARRLSVRTFVMEQNKSTVKEALLRELLRGGQVYYLHNDVKTIEKCAADLAELVPEARIAIGHGQMRERELEQVMSDFYHKRFNVLIASTIIETGIDVPSANTIIIERADKFGLAQLHQLRGRVGRSHHQAYAYLLTPPRQQITSDAEKRLEAIANTQDLGAGFVLATNDLEIRGAGELLGDGQSGQIQAVGFTLYMEMLERAVKAIRKGEQPNLDQPLGGGPEINLRLPALIPEDYLPDVHARLILYKRIASAADEEGLKDLQVEMIDRFGLLPEPTKNLVRLTLLKLQAEQLGIKKVDAGPQGGRIEFEAQTPVDPLVLIKLIQGQPNRYKFEGATLFKFMVPMERAEERFNTLEALFERLIPKSV
>NZ_CP045767.1|WP_032873405.1|941893_943357_+|glyceraldehyde-3-phosphate-dehydrogenase
MWKVPVTQKPDQCLGEWIDREALAEAMIPLIGQLYRNNNVVSSIYGRSLINQSVIAILKAHRFARHRSADDSELSVHETFPLLKAMSELKLGAASVDLGKLAYKFRKEGAGRTAEQFVREEMADVVGQQNAAARKGTDVVLYGFGRIGRLLARILIEKTGGGDGLRLRAIVVRKGAENDLTKRASLLRRDSVHGSFNGTITIDEENNTITANGNLIQVIYAKNPTEVDYTQYGIQNALLVDNTGVWRDAEGLGQHLACPGVDRVVLTAPGKGKLKNIVHGINHAEITADDKIVSAASCTTNAIVPVLKAVNDKFGIVNGHVETVHSYTNDQNLIDNFHKGDRRGRSAALNMVITETGAATAAAKALPELAGKLTGNAIRVPTPNVSMAILNLNLEKAATREEMNEYLRYMALHSDLHKQIDFVNSQEVVSTDFVGSRHAGVVDAEATITQDNRVVLYVWYDNEFGYSCQVVRVMEDMAGVNPPAFPR

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Crispr_ID: NZ_CP045767_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045767_3

1182972-1183078

Orphan

Consensus_repeat	Method
ATCCAACTGTGGGAGCTGGCTTGCCTGCGATGACG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045767_3

>merge|NZ_CP045767|3|1182972-1183078|CRISPRCasFinder
ATCCAACTGTGGGAGCTGGCTTGCCTGCGATGACGGCTTGACAGCCGACGCCTATCTACATGACACCCCGCAATCCAAATGTGGGAGCTGGCTTGCCTGCGATGACG

>NZ_CP045767|3|3|1182972-1183078|CRISPRCasFinder
ATCCAACTGTGGGAGCTGGCTTGCCTGCGATGACG	GCTTGACAGCCGACGCCTATCTACATGACACCCCGCA
ATCCAAATGTGGGAGCTGGCTTGCCTGCGATGACG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045767.1\|WP_019816697.1\|1187330_1188149_+\|DUF4892-domain-containing-protein	unknown	unknown	gnl\|CDD\|374449
NZ_CP045767.1\|WP_032902993.1\|1183352_1185002_+\|AMP-binding-protein	unknown	unknown	gnl\|CDD\|341255
NZ_CP045767.1\|WP_003190068.1\|1191549_1192248_+\|orotidine-5'-phosphate-decarboxylase	unknown	unknown	gnl\|CDD\|234695
NZ_CP045767.1\|WP_020301704.1\|1178747_1180829_-\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|238657
NZ_CP045767.1\|WP_014717756.1\|1190525_1191290_-\|response-regulator	unknown	unknown	gnl\|CDD\|223816
NZ_CP045767.1\|WP_003190033.1\|1173921_1175142_-\|beta-ketoacyl-ACP-synthase-I	unknown	unknown	gnl\|CDD\|181184
NZ_CP045767.1\|WP_032902995.1\|1185573_1186377_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_CP045767.1\|WP_020301701.1\|1172109_1173735_+\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|223910
NZ_CP045767.1\|WP_014717747.1\|1181063_1182089_+\|NAD(P)H-dependent-glycerol-3-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|234629
NZ_CP045767.1\|WP_014717748.1\|1182099_1182447_+\|DUF4389-domain-containing-protein	unknown	unknown	gnl\|CDD\|379561
NZ_CP045767.1\|WP_032902998.1\|1189494_1190526_-\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|236531
NZ_CP045767.1\|WP_032902990.1\|1170990_1172013_+\|amidohydrolase-family-protein	unknown	unknown	gnl\|CDD\|368185
NZ_CP045767.1\|WP_032902999.1\|1192371_1193379_-\|NADP-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|176190
NZ_CP045767.1\|WP_014717751.1\|1185032_1185476_+\|hotdog-fold-thioesterase	unknown	unknown	gnl\|CDD\|182360
NZ_CP045767.1\|WP_020301703.1\|1177816_1178746_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|225531
NZ_CP045767.1\|WP_003190063.1\|1188222_1189287_+\|AI-2E-family-transporter	unknown	unknown	gnl\|CDD\|182881
NZ_CP045767.1\|WP_014717744.1\|1175918_1177820_-\|response-regulator	unknown	unknown	gnl\|CDD\|274362
NZ_CP045767.1\|WP_032902996.1\|1186373_1187228_+\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|366166
NZ_CP045767.1\|WP_014717749.1\|1182443_1182893_+\|phosphohistidine-phosphatase-SixA	unknown	unknown	gnl\|CDD\|224973
NZ_CP045767.1\|WP_003190035.1\|1175153_1175669_-\|3-hydroxyacyl-[acyl-carrier-protein]-dehydratase-FabA	unknown	unknown	gnl\|CDD\|179953

Protein	Function_ID	Function_description	E-value
NZ_CP045767.1\|WP_019816697.1\|1187330_1188149_+\|DUF4892-domain-containing-protein	gnl\|CDD\|374449	pfam16234, DUF4892, Domain of unknown function (DUF4892). This family consists of uncharacterized proteins around 270 residues in length and is mainly found in various Pseudomonas aeruginosa species. The function of this family is unknown.	2.94789e-100
NZ_CP045767.1\|WP_032902993.1\|1183352_1185002_+\|AMP-binding-protein	gnl\|CDD\|341255	cd05932, LC_FACS_bac, Bacterial long-chain fatty acid CoA synthetase (LC-FACS), including Marinobacter hydrocarbonoclasticus isoprenoid Coenzyme A synthetase. The members of this family are bacterial long-chain fatty acid CoA synthetase. Marinobacter hydrocarbonoclasticus isoprenoid Coenzyme A synthetase in this family is involved in the synthesis of isoprenoid wax ester storage compounds when grown on phytol as the sole carbon source. LC-FACS catalyzes the formation of fatty acyl-CoA in a two-step reaction: the formation of a fatty acyl-AMP molecule as an intermediate, and the formation of a fatty acyl-CoA. Free fatty acids must be "activated" to their CoA thioesters before participating in most catabolic and anabolic reactions.	0
NZ_CP045767.1\|WP_003190068.1\|1191549_1192248_+\|orotidine-5'-phosphate-decarboxylase	gnl\|CDD\|234695	PRK00230, PRK00230, orotidine-5'-phosphate decarboxylase.	4.87177e-130
NZ_CP045767.1\|WP_020301704.1\|1178747_1180829_-\|TonB-dependent-receptor	gnl\|CDD\|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	1.73093e-30
NZ_CP045767.1\|WP_014717756.1\|1190525_1191290_-\|response-regulator	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	1.4331e-75
NZ_CP045767.1\|WP_003190033.1\|1173921_1175142_-\|beta-ketoacyl-ACP-synthase-I	gnl\|CDD\|181184	PRK07967, PRK07967, beta-ketoacyl-ACP synthase I.	0
NZ_CP045767.1\|WP_032902995.1\|1185573_1186377_+\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	2.22673e-13
NZ_CP045767.1\|WP_020301701.1\|1172109_1173735_+\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	2.02558e-65
NZ_CP045767.1\|WP_014717747.1\|1181063_1182089_+\|NAD(P)H-dependent-glycerol-3-phosphate-dehydrogenase	gnl\|CDD\|234629	PRK00094, gpsA, NAD(P)H-dependent glycerol-3-phosphate dehydrogenase.	2.00718e-169
NZ_CP045767.1\|WP_014717748.1\|1182099_1182447_+\|DUF4389-domain-containing-protein	gnl\|CDD\|379561	pfam14333, DUF4389, Domain of unknown function (DUF4389). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and archaea. Proteins in this family are typically between 104 and 223 amino acids in length. There is a single completely conserved residue R that may be functionally important.	6.8723e-29
NZ_CP045767.1\|WP_032902998.1\|1189494_1190526_-\|HAMP-domain-containing-protein	gnl\|CDD\|236531	PRK09467, envZ, osmolarity sensor protein; Provisional.	8.28855e-45
NZ_CP045767.1\|WP_032902990.1\|1170990_1172013_+\|amidohydrolase-family-protein	gnl\|CDD\|368185	pfam04909, Amidohydro_2, Amidohydrolase. These proteins are amidohydrolases that are related to pfam01979.	4.66585e-12
NZ_CP045767.1\|WP_032902999.1\|1192371_1193379_-\|NADP-dependent-oxidoreductase	gnl\|CDD\|176190	cd05288, PGDH, Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.	0
NZ_CP045767.1\|WP_014717751.1\|1185032_1185476_+\|hotdog-fold-thioesterase	gnl\|CDD\|182360	PRK10293, PRK10293, 1,4-dihydroxy-2-naphthoyl-CoA hydrolase.	1.79885e-47
NZ_CP045767.1\|WP_020301703.1\|1177816_1178746_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|225531	COG2984, COG2984, ABC-type uncharacterized transport system, periplasmic component [General function prediction only].	1.1391e-31
NZ_CP045767.1\|WP_003190063.1\|1188222_1189287_+\|AI-2E-family-transporter	gnl\|CDD\|182881	PRK10983, PRK10983, AI-2E family transporter YdiK.	7.71645e-69
NZ_CP045767.1\|WP_014717744.1\|1175918_1177820_-\|response-regulator	gnl\|CDD\|274362	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS. This protein, TorS, is part of a regulatory system for the torCAD operon that encodes the pterin molybdenum cofactor-containing enzyme trimethylamine-N-oxide (TMAO) reductase (TorA), a cognate chaperone (TorD), and a penta-haem cytochrome (TorC). TorS works together with the inducer-binding protein TorT and the response regulator TorR. TorS contains histidine kinase ATPase (pfam02518), HAMP (pfam00672), phosphoacceptor (pfam00512), and phosphotransfer (pfam01627) domains and a response regulator receiver domain (pfam00072). [Signal transduction, Two-component systems].	5.17402e-94
NZ_CP045767.1\|WP_032902996.1\|1186373_1187228_+\|alpha/beta-fold-hydrolase	gnl\|CDD\|366166	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes.	4.07099e-21
NZ_CP045767.1\|WP_014717749.1\|1182443_1182893_+\|phosphohistidine-phosphatase-SixA	gnl\|CDD\|224973	COG2062, SixA, Phosphohistidine phosphatase SixA [Signal transduction mechanisms].	2.05651e-33
NZ_CP045767.1\|WP_003190035.1\|1175153_1175669_-\|3-hydroxyacyl-[acyl-carrier-protein]-dehydratase-FabA	gnl\|CDD\|179953	PRK05174, PRK05174, bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase.	2.63383e-129

>NZ_CP045767.1|WP_014717749.1|1182443_1182893_+|phosphohistidine-phosphatase-SixA
MKVWILRHGEAEGHAPTDAERNLTEHGRAEVLRSAAHLIGQPLGAIIASPYVRAQQTAQLVRDVLGFQPEIRTVPWLTPDGDVQRVLEKLDSDDDVLLVSHQPLVGSLISFLQHGHQRQPQPMYTASLAELEGDFPLAGLMSLVGVKNP
>NZ_CP045767.1|WP_014717748.1|1182099_1182447_+|DUF4389-domain-containing-protein
MNDPKAAPPYESIVLRILWMLVFALVWQVAQFLLGALVVVQLIYRLVYGAPNLGLMNFGDSLSQFLAQIGRFGSFHTEQKPWPFADWPTPRAPEGEAAHSVPPAPHPVRDEEPKL
>NZ_CP045767.1|WP_014717747.1|1181063_1182089_+|NAD(P)H-dependent-glycerol-3-phosphate-dehydrogenase
MTEQRPIAVLGGGSFGTAVANLLAENGHAVRQWMRDPEQAEAIRVHRENPRYLKGIKIHPAVEPVTDLLDTLTACDLCFVALPSSALRSVLAPHAERLAGKLLVSLTKGIEAHTFKLMSEILTEIAPQARIGVLSGPNLAREVAEHALTATVVASEDEALCERVQAVLHGRTFRVYASADRFGVELGGALKNVYAIIAGMAVALGMGENTKSMLITRALAEMTRFAVNQGANPMTFLGLAGVGDLIVTCSSPKSRNYQVGFALGQGLSLEEAVTRLGEVAEGVNTLKVLKAKAQEVGVYMPLVAGLHAILFEGRTLNQVIELLMRAEPKTDVDFISTSGFN
>NZ_CP045767.1|WP_020301704.1|1178747_1180829_-|TonB-dependent-receptor
MLVCATCAQADDLFLDSQPLPQVLTATRLKQSAAAVPGSMTVIDSELIKASGARDISELLRLVPGMMVGYTSGNQASVNYHGTSASDARRMQVLIDGRSVYRAGLATVDWSDIPVAMEDIERIEVFRGPNTVSYGANALMAVVNILTRSPANSQGSRIKVVRGERGINDFYASQGVGWETGDLRLSLSGQQDDGFDSDAAGADRRDGRRLNRFSLAVSQTLNGQQSLDWQLNVKEGTNQRPYTYTPVFAGITEGGSNSDATAKDYAGSLRWNFDFNPDHSLYIQGSAQQWDRKQIWKACDAKVSFSPELTQLWQLNPNYAEQLARHMDTYSQGSAPPGSAAEQALANQVLGQWRNGANQSVCGDIDQSARESRYDVEIQDTLSLSDSLRLVSGMNYRYDRADSETYFNGTLDDTTWRLFGHLEWRASEHWLLQGGAMYEDTHLSGNSLTPRVAVNYLINPRHGLRAVYSEAIRSPDMFENNVNWSYRVTNLSSPTYGQNAGQYFVVTRGPGNLDKELMRSRELGYNGFFAELGLNVDVKLFYDEITDMISSPLRNNQYIASNANSSRFTGAESQFDWRVSSADRLRLTYAYVDATSSNPLDKAQTARNSGSAGWLREWGQGWSSALFYYGDDALNQYRFQRVDLRVAKRIAVGKTNVELAGMLQQRLDNQPTTWADNNYDHRHVLYFSAELDF
>NZ_CP045767.1|WP_020301703.1|1177816_1178746_-|ABC-transporter-substrate-binding-protein
MADQSRMTRLLVSRLWRRGLLLACLLLAAPAWSASILLTAAEDGAGVRAFTQALAQQRPNDQVSFTPLNELPAPRDLPASTRLILLDLPGLDWRLQDAQGPPALVLRISRLQARQRLGNTHPAKISLLWSDPPLERQLRLIVHILPQAQRVGVLYDAGSEFLLRELMQAAKPIGLEIVPQLWDNTSDSRPLQNLFKNSDVLLGLDDPNLYNPKTVKNLLLSSYARQLPLVGPNAGFVRAGSLASTYSDQADWLAVLDHLLDQPPANWPHTLYPEHFKVVGNPQVARSLGIEQVDEVAVAARLAEGEQRP
>NZ_CP045767.1|WP_014717744.1|1175918_1177820_-|response-regulator
MTLRRRWDINTRTQLITLGPALLLTLLLITFFTFVRIQDLRQELDHTGQLIANQLAPATEYGVISGNNDVLESLLRATLATPHVRFLEIQDSAENILVYVEQPSERHDRSLSVKVFQAPIRLQHIQLNNDFFQDNLNEPKAPRADYLGRVIVGMSNDAFSQRQQEILFKAGILALFALLFTFLLARRLSASLSKPISAMGHAVKAIQQGDYKTPLPIVDDSELGDLSRHINNLAEGLHQASREQQQAMAQLIQTREEAERANNAKSDFLAMMSHELRTPMNGVLGMLQLLETTEMTEEQTEYAALASESTEHLLKVINDILDFSRIERAALELEHIPFNLADLISSCAQAFQHSAQQRGLSLELPIPMGLEALRVRGDPTRIRQILVNLIGNALKFTEHGSVTVEPHWQTLDHELLWFTCTVRDSGIGISAERLDLMFDAFQQADSSISRRYGGTGLGLPIARTLAERMGGTLRAQSEEGRGSVFTLEIPLAIDQQHVPVAAPDALGKASAGDGRHVLLVEDNPVNRTVVEAMLRSLGFEVSLATDGAEAIRSAESLIFTAILMDCRLPLIDGYEATRQIRQLPGCADLPIIALTANALQGDREACLAAGMNDYLAKPFKRTDLQQILQRWVQ
>NZ_CP045767.1|WP_003190035.1|1175153_1175669_-|3-hydroxyacyl-[acyl-carrier-protein]-dehydratase-FabA
MTKQNAFTREDLLRCSRGELFGPGNAQLPAPNMLMVDRITHISEEGGKYGKGELVAELDITPDLWFFACHFEGDPVMPGCLGLDAMWQLVGFYLGWQGLPGRGRALGSGEVKFFGQVLPSAKKVTYNIQIKRVLKGKLNLAIADGSVTVDGREIYTAEGLRVGVFTSTDNF
>NZ_CP045767.1|WP_003190033.1|1173921_1175142_-|beta-ketoacyl-ACP-synthase-I
MRRVVITGLGIVSCLGNDKETVTANLRASRPGIRFNPEYAEMGLRSQVSGSIDLPLEELIDRKIYRFVGHAAAYAYLAMKDAIADSGLSEDQVSNVRTGLIAGSGGASTLNQMEALDILREKGVKRVGPYRVTRTMGSTVSACLATPFQIKGVNYSISSACATSAHCIGTAVEQIQLGKQDIVFAGGGEEEHWSQSFLFDAMGALSTQYNETPEKASRAYDAKRDGFVIAGGGGMVVVEELEHALARGAKIYAEIVGYGATSDGYDMVAPSGEGAIRCMQMAMSTVDTPIDYLNTHGTSTPVGDAKEMEGVRAVFGDKAPKISSTKSLSGHSLGAAGVHEAIYCLLMMEGNFMAGSANIDEIDPVVADMPILTKTVENAKIDTVMSNSFGFGGTNATLVLKRWQGK
>NZ_CP045767.1|WP_020301701.1|1172109_1173735_+|methyl-accepting-chemotaxis-protein
MNIRSLNIAPRAGLGFGVLALMVFVLGGFALLQMANMRQQSDQVETNWLPSVMAVGEMNQDVLRIRALTLRLLVNRDPQAVAQNEQKIAEIKTGLHHAEGVYEALIVLPEERVLFDRFKVEEQQYLQRQEQVVGLSKANRLEEAIAVVNGEMNQMADQMAVTLRELVNLNKSSANEAARLAQQVFSQSRVWVMTMIGVTALITIGLAVWLTRSIVLPLAQSLKVAQGVASGDLTGDIRLSGSDEPARLQQALKRMQESLRDTIRRISESSNQLASASEELSCVTEDATRGLHQQNQEIEQAATAVNQMTVAVEEVASNAVATSQASRESDRIAQQGREQVQQTVVSIEALATDVTANVTQVEALAQKVYGISTVLDVIRSIAEQTNLLALNAAIEAARAGDAGRGFAVVADEVRALAHRTQQSTQEIEQMISGIQQGTDQAVSSMQQSNTRARSTLEIAKSAGMALEEIASAFTLINERNLVIASASEQQAAVAREVDRNLMNIRDLAHQTSTGANQTSAASQELSRLAVDLNSMVARFSV
>NZ_CP045767.1|WP_032902990.1|1170990_1172013_+|amidohydrolase-family-protein
MSGTRLSLALLLAISSLAAQARDYAYSDAHLHYVDFFQESAGMDKLLKAMADNRIEHVMISGIPVAKKWHEDEPKRPRYYAGDDADAYWYSATDVIVAAAVNKLSPAQRQHFHPFLAGFNPNDKNSAAHIQRMLDLNPGLWQGIGEVFTRHDDLTALTSGDTPRANNEAMTRIYHLAAENDLPVMLHSNITSKRERNPLYLAEVEQPLRNHPHTRFIWAHAGTSKEIHRHQVQMEFLLPTLARLLEAYPNLYIDLSWSMLTPYLLDDAGKPRSQWVALVERFPDRFMLGSDVVGRFNKLGKEMRRFDPFLDALPEDVAHKVARDNFLAILPKPHRDGDAR
>NZ_CP045767.1|WP_032902993.1|1183352_1185002_+|AMP-binding-protein
MPVAFRLPLQVFFEREARHPRKVFLVQPIGGGEVQALTWGDVGHQVRCAAHWLRARELPQGSHIALISKNCAHWIIADLAIWMAGHVSVPLYPNLTADSVAHVLTHSQARLALIGKLDDWSAMAPGIPAGVPTISLPLCPDGAFDFNWANLQACSPIQDNPLPDADSLATIIYTSGTTGLPKGVMHSFGALGCAATRGTELFGLGEDDRLLSYLPLCHVAERMFVEMASIYTGQTVFFAESLETFLTDLRRARPTALFGVPRIWTKFQLGVYAKIPEKRLDTLLRLPFIGKRVGHKVLAGLGLDALRIALSGAAPVPEALLRWYQRLGLDVLEVYGMTENCGYSHVCRPGGQTLGWIGQPCPGVQVRIDPSGEVQVHSGATMLGYFKDPQKTADTLTADGFLRTGDKGEQDADGRLRLTGRLKEIFKTSKGKYVAPAPIENRLAEHARIEQVCVVGEGLSAPIGLCVLSAPGEDRQALGSGLERWLAQVNAGLDKHERMGQLVVVKDHWAVENGFLTPTLKIKRNVIESTYGPQLQAWSARAETVLWQD
>NZ_CP045767.1|WP_014717751.1|1185032_1185476_+|hotdog-fold-thioesterase
MSLWRTQPNIEHLNAIQKNTIGEMLDIRFESFDDESLTASMVVDHRTHQPYGLLHGGASVVLAESVGSMAAYLCIDASKFYCVGLEVNANHLRGVRSGRVTAVAKAIHIGRTTQVWDIRLSSDEGKASCVSRLTMAVVPLGEQPPAR
>NZ_CP045767.1|WP_032902995.1|1185573_1186377_+|alpha/beta-hydrolase
MSQHVFFTHANGFPSATYGKLFAALAPEYAVAHLPQHGHDPRFPVDDNWQNLVDELIHHLEQQPEPVWGVGHSLGGVLHLHAAMRCPHLYRGVVMLDSPVLTRADRWVIRAAKRFGFIDRLTPAGRTLGRREEFTDLDTARSYFAGKTLFRGFDPDCFDAYLQHGLQQVGDRLRLRFDPATEISIYRGVPHTSPGQVRQLKVPLAVVRGRQSQVVMRHHASGVDRLPMGEMLTMPGGHMFPLERPQDTAALIKNLFARWQARERSCA
>NZ_CP045767.1|WP_032902996.1|1186373_1187228_+|alpha/beta-fold-hydrolase
MSTPVEEVRLSLPHIELAAHLFGAEDGLPVIALHGWLDNANSFARLAPKLHGLRIVALDMAGHGHSAHRPAGAGYALWDYVYDVLQVAEQLGWKRFALLGHSLGAIVSLVLAGALPERVTHLGLIDGVIPPTASGENAAERLGMALQAQLSLQDKRKPVYNSLDRAVEARMKGVVAVSREAAQLLAQRGLMPVPGGYTWRSDSRLTLASPMRLTDEQAMAFVRRVGCPTQLVVAADGMLAKHSELLSQLPFTVTTLPGGHHLHLNDEPGAALVADCFNRFFSTP
>NZ_CP045767.1|WP_019816697.1|1187330_1188149_+|DUF4892-domain-containing-protein
MSLGKGCIRALGLCCFSPLVFAADLPGSQDLPAVARQVDAQIVDYRPAEDKERIYPMGAIRKISGQLRYEGQAIARGPATAITYELPAEHSSSAAFTATREALQAKGAQLLFWCKARDCGESSLWANEVFGNAKLVGADGQQEYLLLRLAAPQDNSLVALYGITRGNRRAYLHVEQLDASAPLGNLLPTSATLLRELKSTGELDFPALGAEPDDTWLTLISRALNLDTTLRVSLSGPHTEAWRQALVEKGVRTARLETGAGETQGLHLHLIR
>NZ_CP045767.1|WP_003190063.1|1188222_1189287_+|AI-2E-family-transporter
MLNNDRLLVQILLLVLFGASFWVMAPFWSALFWGAVLAFASWPLMRLLTRWLGGRESLAAGILTLGWMLLVAVPLVWLGFNLADHVRDAVALIKDIQVDGLPEAPTWLGSIPFVGERLVATWDSIDQQGAALMVSIKPYLGQVGNWLLARSAQIGGGILELTLSLVFVFFFYRDGPRLAMFVHRLLERLIGERAGYYIELVAGTVQRVVNGVIGTAAAQALLALIGFLIAGVPGALVLGIVTFLLSLIPMGPPLVWIPATAWLAWKGDYTYAVFLGVWGTFVISGVDNVLKPYLISRGGNLPLVIVLLGVFGGLIAFGFIGLFIGPTLLAVAYSLLTDWSASQAQVRREDKPCN
>NZ_CP045767.1|WP_032902998.1|1189494_1190526_-|HAMP-domain-containing-protein
MRAPFNTLFGRLFGLLLVAIVLAHVLAFFWFHHYGPPPPPRAAFVEQPDGSLTPLRKAPRPWFGGPVVPLTFQFISLIIAAWYGAKLLSRPIQRLSAAAERLSVDLDSPPLVETGPREARQAASTFNLMQKRIREQVSQRARMLGAVSHDLRTPLSRLKLRLEQIEDPKLQGQMRQDLDDMIGMLDATLSYLHEQRTSETRHWLDVQALVESLSENAQDQGRDVQFAGTCTPLQVQPMALRSCLNNLIDNALRYAGTARVELADSRGALVIRVIDHGPGIAADKREAVFEPFFRLEGSRNRNSGGVGLGMTIAREAVERLGGHLSLEDTPGGGLTAVMWLPRG
>NZ_CP045767.1|WP_014717756.1|1190525_1191290_-|response-regulator
MHTPCDPVNEAPKDAVIAEDKRWNTRALIVDDDVPIRELLIDYLARFNILASGVTDGTAMRQAMQAETFDVVVLDLMLPGEDGLTLCRWLRAESDIPILMLTARCEPTDRIIGLELGADDYMSKPFEPRELVARIQTILRRVRDDRTEQRANIRFDTWRLNSVLRQLVADDGLVVPLSNAEFRLLWVFIERPRRVLSREQLLDAARGRSIEAFDRSIDLLVSRLRQKLGDDPKAPQLIKTVRGEGYLFDARDIG
>NZ_CP045767.1|WP_003190068.1|1191549_1192248_+|orotidine-5'-phosphate-decarboxylase
MSVCQTPIIVALDYPTRDAALKLADQLDPKLCRVKVGKELFTSCAAEIVGTLRDKGFEVFLDLKFHDIPNTTAMAVKAAAEMGVWMVNVHCSGGLRMMSACREVLEQRSGPKPLLIGVTVLTSMEREDLAGIGLDIEPQVQVLRLAALAQKAGLDGLVCSALEAQALKNAHPSLQLVTPGIRPTGSAQDDQRRILTPRQALDAGSDYLVIGRPISQAADPAKALAAVVAEIA
>NZ_CP045767.1|WP_032902999.1|1192371_1193379_-|NADP-dependent-oxidoreductase
MTAQTNRQFLLAKRPVGAATRETFTYQEVPVGEPQEGQVLVRNEYLSLDPAMRGWMNEGKSYIPPVGIGEVMRALGVGKVIASKHPNFAVGDYVNGALGVQDYFLGEPRGFYKVDPKLAPLPRYLSALGMTGMTAYFALLDTGAPKTGDTVVISGAAGAVGSIAGQIAKLKGCRVVGIAGGAEKCKFLVDELGFDAAIDYKNEDVPAALKRECPKGVDVYFDNVGGDILDAVLSRLALKARVVICGAISQYNSKEAVKGPANYLSLLVNRARMEGFVVMDHAANFAAAGQEMAGWMAQGKLKSKEDIVEGLETFPETLMKLFNGENFGKLVLKVS

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Crispr_ID: NZ_CP045767_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045767_4

1314299-1314395

Orphan

Consensus_repeat	Method
CACCCCGCAATCCAACTGTGGGAGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045767_4

>merge|NZ_CP045767|4|1314299-1314395|CRISPRCasFinder
CACCCCGCAATCCAACTGTGGGAGCTGGCTTGCCTGCGATGACGGCATGCCAGCCGACGCCTATCTACTTGGCACCCCGCAATCAAACTGTGGGAGC

>NZ_CP045767|4|4|1314299-1314395|CRISPRCasFinder
CACCCCGCAATCCAACTGTGGGAGC	TGGCTTGCCTGCGATGACGGCATGCCAGCCGACGCCTATCTACTTGG
CACCCCGCAATCAAACTGTGGGAGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045767.1\|WP_020301885.1\|1323019_1325413_+\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|227113
NZ_CP045767.1\|WP_014717843.1\|1311960_1312911_-\|DUF4880-domain-containing-protein	unknown	unknown	gnl\|CDD\|236622
NZ_CP045767.1\|WP_032903766.1\|1304309_1305137_-\|polysaccharide-export-protein	unknown	unknown	gnl\|CDD\|224512
NZ_CP045767.1\|WP_020301884.1\|1320963_1321365_+\|cytochrome-c	unknown	unknown	gnl\|CDD\|365823
NZ_CP045767.1\|WP_032903768.1\|1306054_1307515_-\|mannose-1-phosphate-guanylyltransferase/mannose-6-phosphate-isomerase	unknown	unknown	gnl\|CDD\|273648
NZ_CP045767.1\|WP_014717844.1\|1312897_1313413_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|171561
NZ_CP045767.1\|WP_032903767.1\|1305143_1306055_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|366154
NZ_CP045767.1\|WP_032903771.1\|1321444_1321945_+\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|171560
NZ_CP045767.1\|WP_020301883.1\|1320015_1320816_-\|glucose-1-dehydrogenase	unknown	unknown	gnl\|CDD\|187616
NZ_CP045767.1\|WP_014717849.1\|1318196_1320023_-\|glycoside-hydrolase-family-15-protein	unknown	unknown	gnl\|CDD\|225922
NZ_CP045767.1\|WP_014717848.1\|1317297_1318209_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_CP045767.1\|WP_014717841.1\|1307514_1308954_-\|undecaprenyl-phosphate-glucose-phosphotransferase	unknown	unknown	gnl\|CDD\|274396
NZ_CP045767.1\|WP_014717845.1\|1313582_1314212_+\|LysE-family-translocator	unknown	unknown	gnl\|CDD\|224199
NZ_CP045767.1\|WP_019818712.1\|1315573_1316254_-\|DJ-1/PfpI-family-protein	unknown	unknown	gnl\|CDD\|153233
NZ_CP045767.1\|WP_032903770.1\|1316343_1317312_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|227311
NZ_CP045767.1\|WP_032903772.1\|1321971_1322922_+\|FecR-family-protein	unknown	unknown	gnl\|CDD\|226235
NZ_CP045767.1\|WP_020302539.1\|1302259_1304239_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225747
NZ_CP045767.1\|WP_032903764.1\|1301078_1302260_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|340849
NZ_CP045767.1\|WP_153649496.1\|1309369_1311856_-\|TonB-dependent-siderophore-receptor	unknown	unknown	gnl\|CDD\|227114
NZ_CP045767.1\|WP_019818714.1\|1315153_1315408_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP045767.1\|WP_020301885.1\|1323019_1325413_+\|TonB-dependent-receptor	gnl\|CDD\|227113	COG4772, FecA, Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism].	0
NZ_CP045767.1\|WP_014717843.1\|1311960_1312911_-\|DUF4880-domain-containing-protein	gnl\|CDD\|236622	PRK09774, PRK09774, fec operon regulator FecR; Reviewed.	4.22287e-81
NZ_CP045767.1\|WP_032903766.1\|1304309_1305137_-\|polysaccharide-export-protein	gnl\|CDD\|224512	COG1596, Wza, Periplasmic protein involved in polysaccharide export, contains SLBB domain of b-grasp fold [Cell wall/membrane/envelope biogenesis].	1.26993e-27
NZ_CP045767.1\|WP_020301884.1\|1320963_1321365_+\|cytochrome-c	gnl\|CDD\|365823	pfam00034, Cytochrom_C, Cytochrome c. The Pfam entry does not include all Prosite members. The cytochrome 556 and cytochrome c' families are not included. All these are now in a new clan together. The C-terminus of DUF989, pfam06181, has now been merged into this family.	7.0508e-06
NZ_CP045767.1\|WP_032903768.1\|1306054_1307515_-\|mannose-1-phosphate-guanylyltransferase/mannose-6-phosphate-isomerase	gnl\|CDD\|273648	TIGR01479, Mannose-1-phosphate_guanylyltransferase, mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase. This enzyme is known to be bifunctional, as both mannose-6-phosphate isomerase (EC 5.3.1.8) (PMI) and mannose-1-phosphate guanylyltransferase (EC 2.7.7.22) in Pseudomonas aeruginosa, Xanthomonas campestris, and Gluconacetobacter xylinus. The literature on the enzyme from E. coli attributes mannose-6-phosphate isomerase activity to an adjacent gene, but the present sequence has not been shown to lack the activity. The PMI domain is C-terminal. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides].	0
NZ_CP045767.1\|WP_014717844.1\|1312897_1313413_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|171561	PRK12528, PRK12528, RNA polymerase sigma factor; Provisional.	2.00168e-59
NZ_CP045767.1\|WP_032903767.1\|1305143_1306055_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|366154	pfam00535, Glycos_transf_2, Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.	3.83311e-18
NZ_CP045767.1\|WP_032903771.1\|1321444_1321945_+\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|171560	PRK12527, PRK12527, RNA polymerase sigma factor; Reviewed.	2.66455e-37
NZ_CP045767.1\|WP_020301883.1\|1320015_1320816_-\|glucose-1-dehydrogenase	gnl\|CDD\|187616	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs. GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs.	1.74011e-132
NZ_CP045767.1\|WP_014717849.1\|1318196_1320023_-\|glycoside-hydrolase-family-15-protein	gnl\|CDD\|225922	COG3387, SGA1, Glucoamylase and related glycosyl hydrolases [Carbohydrate transport and metabolism].	4.47326e-113
NZ_CP045767.1\|WP_014717848.1\|1317297_1318209_-\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	1.319e-28
NZ_CP045767.1\|WP_014717841.1\|1307514_1308954_-\|undecaprenyl-phosphate-glucose-phosphotransferase	gnl\|CDD\|274396	TIGR03023, Sugar_transferase., Undecaprenyl-phosphate glucose phosphotransferase. This family of proteins encompasses the E. coli WcaJ protein involved in colanic acid biosynthesis, the Methylobacillus EpsB protein involved in methanolan biosynthesis, as well as the GumD protein involved in the biosynthesis of xanthan. All of these are closely related to the well-characterized WbaP (formerly RfbP) protein, which is the first enzyme in O-antigen biosynthesis in Salmonella typhimurium. The enzyme transfers galactose from UDP-galactose (NOTE: not glucose) to a polyprenyl carrier (utilizing the highly conserved C-terminal sugar transferase domain, pfam02397) a reaction which takes place at the cytoplasmic face of the inner membrane. The N-terminal hydrophobic domain is then believed to facilitate the "flippase" function of transferring the liposaccharide unit from the cytoplasmic face to the periplasmic face of the inner membrane. Most of these genes are found within large operons dedicated to the production of complex exopolysaccharides such as the enterobacterial O-antigen. Colanic acid biosynthesis utilizes a glucose-undecaprenyl carrier, knockout of EpsB abolishes incorporation of UDP-glucose into the lipid phase, and the C-terminal portion of GumD has been shown to be responsible for the glucosyl-1-transferase activity.	3.19294e-164
NZ_CP045767.1\|WP_014717845.1\|1313582_1314212_+\|LysE-family-translocator	gnl\|CDD\|224199	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism].	7.17944e-33
NZ_CP045767.1\|WP_019818712.1\|1315573_1316254_-\|DJ-1/PfpI-family-protein	gnl\|CDD\|153233	cd03139, GATase1_PfpI_2, Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus. Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus. PfpI is an ATP-independent intracellular proteases which may hydrolyze small peptides to provide a nutritional source. Only Cys of the catalytic triad typical of GATase1 domains is conserved in this group. This Cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow.	4.4415e-87
NZ_CP045767.1\|WP_032903770.1\|1316343_1317312_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|227311	COG4977, COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain [Transcription].	1.40311e-83
NZ_CP045767.1\|WP_032903772.1\|1321971_1322922_+\|FecR-family-protein	gnl\|CDD\|226235	COG3712, FecR, periplasmic ferric-dicitrate binding protein FecR, regulates iron transport through sigma-19 [Inorganic ion transport and metabolism, Signal transduction mechanisms].	6.94412e-67
NZ_CP045767.1\|WP_020302539.1\|1302259_1304239_-\|hypothetical-protein	gnl\|CDD\|225747	COG3206, GumC, Uncharacterized protein involved in exopolysaccharide biosynthesis [Cell envelope biogenesis, outer membrane].	5.5894e-39
NZ_CP045767.1\|WP_032903764.1\|1301078_1302260_-\|glycosyltransferase	gnl\|CDD\|340849	cd03822, GT4_mannosyltransferase-like, mannosyltransferases of glycosyltransferase family 4 and similar proteins. This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.	2.83985e-69
NZ_CP045767.1\|WP_153649496.1\|1309369_1311856_-\|TonB-dependent-siderophore-receptor	gnl\|CDD\|227114	COG4773, FhuE, Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism].	0

>NZ_CP045767.1|WP_014717845.1|1313582_1314212_+|LysE-family-translocator
MISLVTLGVFSGAVLLLLLSPGPNMAFVISQGVTHGWRGGVASALGIGVADLLLTALTAMGVTALVASWPPAFDLIRYAGVIYLLWLAFKTLQKRPGLDTAHVGRVALGRVFLQAMLNSLLNPKALLFFMVFLPQFVRPEAGPIALQLMVLGGVLTLIASVFHMLLGLFGGALSRFFAKRTKSAWLQKWGLAAVLTALAVRLAVMSRPA
>NZ_CP045767.1|WP_014717844.1|1312897_1313413_-|sigma-70-family-RNA-polymerase-sigma-factor
MSSNHPLDLAAIGQLYQAHHSWLRGWLSRRTGCHERAADLAQDTFVRLLNARQQQTLQQPRAYLSSIARSLMIDQYRRRELERAYLESLAHFAQMEVPSEETRLLILDSLERIDRLLDQLKPRVREAFLLAQLDGLTCPQIALRLGVSKATVERDLSKALHACYRLRYADS
>NZ_CP045767.1|WP_014717843.1|1311960_1312911_-|DUF4880-domain-containing-protein
MPTPDSRLVDQAIQWMIKLRYNTADDASTAAFEQWLQTSEAHQQAWQRVATLNDDFNHLPAHVSRHALDGARRHISRREGLKMLGLFAGAAGLAWLGRDYTPLPALMADYRTATGERRWVALEDGSKVQLNSASAVDITSSAEQRLVNLRQGEILINTGVDRRPLWVHTRDGYLRALGTRLLVREEPQGTLLAVQQGAVAVFADRHDGTARQVIKPGEQVVFNRSGIRPSPNNGLDPWAWSDGVISAHNMRLEDFLAELGRYRNGLLRCSEAVAGLRVSGTYQLDDTDQVLKLVAQSLAIDVTYRSRYWVTVSARV
>NZ_CP045767.1|WP_153649496.1|1309369_1311856_-|TonB-dependent-siderophore-receptor
MQAFPSKRSPLRHALNATLLGACVAASALPYTASAQEPGSERQARAWNIAPGPLAGALDQFARQAGISLSYDAGSVAGKSSPGLSGTLAPQQALNRLLQGQGLQAQSQGQNAWLLLPQQQAGSTLNLGATTITGDRLGATTEGTGSYTTGAVTIGKGEHSLRRTPQSVSVMTRKLMDDQNITTIDQLLERTPGITSYESPMGGKYFYSRGFKMLGQYQFDGVPLDIGKDYVQADSFSANMAIYDRVEVLKGAAGMLKGAGTASGAVNFVRKRPQDKPTTSLGLSAGTWDNYHTEFDTGGPLNDSGTVRGRAAVSQQNRGSYMDLAKRQDQAFYAALDMDVSPDTTLGFGASYEDVDSTPCWSGLPRYRDGKSLGLSRSTCLGQAWNDWQSQRTTLFADLTHHFNDDWKLKVSAVHSRNLQDIKYAASESTVDYGNPAPTLTSYAALLDYDHKDYGLDAYIDGQFEAVGLQHELILGANGSRGTQDDVYAIRNLPQRQSVFNPNHHFPEPADDTFWPNMYRGGTVKETATQYGAYATLRLRLAEPLMLVLGSRVSWYENRRESLNLAWGEWTDQDARTKETGVVTPFAALIYDLNDNLSVYTSYADIFQPQSSYATVSGSALKPKMGENYELGIKGEWFDGRLNSSLALFRAVEKNAAQTDFETRCGSSSDGYCYTDTGKVRAQGVEAELSGELIERLQVFGGYTYTQTKNLKNIDSAAEGAVSNTYVPRHMLRLWGDYQLDGALSKWTVGAGVNAQSSNYRLQTIKLEQAGYALWNARLAYQVDDTWTVALNGNNLFDKNYYQTVGTSGWGNLYGEPRNLTLSLKGNF
>NZ_CP045767.1|WP_014717841.1|1307514_1308954_-|undecaprenyl-phosphate-glucose-phosphotransferase
MRGKSSVDSLFLTRPGFVEFFVVFVKLIHGLTAVVPAIILLFYPDPVAEHMRNHYLGLLVFFALLTIILFQALGVYSEDLFSNRLRFRVMLVAWVSAFCILLFMYQILLLFPQLSPRNLAAWFSMSLVLFGVERILMLRLYRHLMDNGKFLQRTVILGFTDTAVHVAEHLSRNSDIRSGLIGFIDDRTERIPKELSRLPLLGNTRDLEKLIRSEQVNQVMITLPWAAEQRINGLVKRLRQMSVNVMLVPDMAALRYGHNRITDVGGILMFNTSQLPLRGWSPFIKRCEDLLLASIGLLLLSPVMLVTAIAIKLDSKGPVLFRQKRFGYNDNLIRVFKFRSMYVEQTDLNAENQTTRQDPRITRVGRIIRKTSIDELPQLFNVLLGNMSMVGPRPHATATKAAGIPFEQAVSEYSSRHRVKPGITGWAQINGYRGETDTLFKIQKRVEYDLEYIAKWSVWLDLYIVFMTVPAVLSTKEVY
>NZ_CP045767.1|WP_032903768.1|1306054_1307515_-|mannose-1-phosphate-guanylyltransferase/mannose-6-phosphate-isomerase
MNPLNGLIPCIISGGSGTRLWPVSRQNMPKPFMRMRDDQSLLQKTFLRASHLPGVDSILTVTNRDLLFRTLDDYRAVNTQRLGLDLLLEPFGRNTAAAIAVAALHVQEHFGADAQLLVMPADHLVLDEDAFAQAVEKARALAEAGYLVTFGIQPDRAETGFGYIEQGPALGAGFRVQRFVEKPDQATAQGYLDGGKHLWNAGMFCFKAATLLEELASHAPAVLEAAKAALEHSQSLQNSSSRQRELSPEGFGTAPDISIDVALMEKSAQVAVVPCDIGWSDIGSWEALRQLTPSDDNGNQINGEAILHDVHNCYIDSPKRVLGAVGVRDLIIVDTPDALLIADAHRSQDVRHIVAELKRQNHPAFSLHRTVTRPWGTYTVLEESTRFKIKRIVVKPKGSLSLQMHHHRSEHWVVVSGAAMITNGEREILLNMNESTYIPAGHKHRLTNPGIIDLVMIEVQSGEYLGEDDIVRYDDIYGRAPVEVKP
>NZ_CP045767.1|WP_032903767.1|1305143_1306055_-|glycosyltransferase-family-2-protein
MRTSLIIPTRNAASHLDRLLPALRMQTLQPDEMLVVDSASSDDTVARFREFGARVEVIDARDFNHGGTRRWASEQVGGDALIVMTQDAIPATAETFANLISELQLEPLNGVAYGRQLPHPGAGVLGAQSRHFNYPAASRTKRLDDAAQLGIKTCFSSDSFSVYRRSALSAVGGFPQDVIGSEDAYVAARMLLAGYQVRYAASAQVYHSHDYRLLEEFRRYFDIGVFYGREPWIRQAFGDAGGEGKRYVLAELHALREANALYRAPEVVVRSAFKLLGYRLGHLERHLPNALKRRLGMFSTYWT
>NZ_CP045767.1|WP_032903766.1|1304309_1305137_-|polysaccharide-export-protein
MKTINRRFRLTLLGLLSTSIWLAGCSTPARVPLPDNTTLKAGHQAALTLADLPPPQVLIQSGDSLRIVRDAQEPAAADDMTIFVVRPDGVISVPNIGRVKAALRTPEDLGKEITEKYKRIYREPAVTVNIASAPSNKVFIGGAVSNPAFFDLAGNVSVEQALLSSGGVLPSADASNVALLRTGPDGKYRTYFISLESMLTNPNHPRVALQRGDLIFVPQSGIGATVEAVDMYFTKLFPINKGIGIGLNYDLNKSDVKNSGNTIYNNPTINAGQGL
>NZ_CP045767.1|WP_020302539.1|1302259_1304239_-|hypothetical-protein
MIEIRSLRDLLRLFFIYRREFKLAVITTIVVAVLGAFLLPARYESDARLLVKPGRDNTTLPIEAANRQTLIAPSTQHDPIVDEEKMLTGRPIVHIVAERYMAMTAEPPQGFWKVTKFYIKKGVGEVINGIRSVLQFVGLAEKQSPLERLATSLEKNFTAGHEPGSSVIEISFTWDDPAVAQKIVEEWVNAYLEERARILGRKSLHTFYETERAKVAENIQSLKDQLQGRLKQIDSISVDARLKNLTNQIDRVTDAKVSAQNQISGIRSLLANASQQIKSQPADVVTMRETSLNPTQLDLKRQLNALQVERARLLRTYLPGTPQVNQIEQNIRDMEALSAQEATRLERSQNTAPNSLVINVKQQMIDAQLQERKLAGEIENYDKTLAELRAQRDQAMTDEPQLNTLSQQLRTAEKSYALYSDNLEQARIDHELDNSQISNIALIEHATLNPARVFPKSLLMLLFAIPAGVAVGLLTIYVLYLLDQRIHDGTRLQEMFHVPLWSSIPDVQDATPAAVTASLYRLYSLLPLDRIAAEGFALGLTSARHGEGVTFIASQLKRLLEERGHRVSVDGASAPTPGEVLLLDASALSSNPQAFLTLRRADQIVLVIEARTSTVPTIENAVSLLTTAFGKVDGMILNRRRFEVPAKVLARLNSWRGAA
>NZ_CP045767.1|WP_032903764.1|1301078_1302260_-|glycosyltransferase
MRIALLAPLPPEQTGIADYAAHLRHALIEQGLEVVTPLAGCLELPEQLKRLQAFDWRGVDLVHAELGGGRFGEFQALEYLRRAQPHLPLTATVHDPERLIWRRAKLFFPLTLLERLPHPLPHAAALLADPLTLHEERRLAKGMRRLITLTRLGGDCLRQRMGLRPQQVAVIAHGNLPIVPQALPPLAPLRLLYFGFIYRGKGIEDLLQALAQSLAAHPQCRSQVRLTLAGGTAPEMTFDPAGNYLDGLREQISALHLEDVVDWQLDLPSAQIPSTIQAHHVMVLPYRESKKLSFLGQMRGTSGALSWANACGRGVITSNARAFAEEVAGGNGITYQQGDTASLSNALSRLILDPQQAQQWAARAGEIGHQRQWANTAQRFAELFRDACEEPLR
>NZ_CP045767.1|WP_019818714.1|1315153_1315408_+|hypothetical-protein
MIKDSPNPPSDSNLLFTLHPNLDTETLLVNASQDLDSINAIAAHLAFEVEGSQRSVVLGICRMVEGVQLLVDRVVEGGGETRAQ
>NZ_CP045767.1|WP_019818712.1|1315573_1316254_-|DJ-1/PfpI-family-protein
MTLQIGFLLFPGIQQLDLTGPYDVLGSLPDVKLHLVWKDLAPITSSTGLVFTPTITYADCPNLDVLCVPGGAGVGPLMEDPQTLDFLKAQAQTVRYMTSVCTGSLVLGAAGLLRGRKATTHWAYHHLLAPLGAIPVQERVVRDGNLFTGGGITAGIDFALTLAAELYSEAAAQLVQLQIEYAPAPPFDSGRPETAPRHVLEEANKRTVESRRVRGEIVARAAARLG
>NZ_CP045767.1|WP_032903770.1|1316343_1317312_+|helix-turn-helix-domain-containing-protein
MPKIIHVLAFENAQVLDVTGPLQVFASANDLARQRGLPLPYAVNVIATQAGPVMTSAGLALLAELLPAIDQPCDTLVIAGGWGVYGVAEDPTLVQWVRDKSLHTRRMASVCTGAFLLAASGLLDGCRVATHWTRCEELARKFPALTVEANPIFIQQGAVWTSAGVTAGIDLCLALVEDDLGRAIALEVARHLVVFLKRPGGQSQFSVTLSLQKSDSRFAELHAWIADNLTLDLSIATLAAQAGMSERSFVRHYRTETGQTPARAVELIRVENARRQLADSTTSIKRIAMQCGFGCEETLRRSFLRALSVTPQAYRERFSPLQ
>NZ_CP045767.1|WP_014717848.1|1317297_1318209_-|alpha/beta-hydrolase
MATVTSPAPLLYVRTTLLDVAYETHGPIDGEPVILLHGFPYDPRGYDDIAPVLAERGYRVLVPYLRGYGPTRFINTQVMRSGQQAALAKDLLDFMDALSIPQATLAGFDWGGRAACIVAALWPQRVRGLVTGDGYNIQAISQSLKPRPPETEHRLWYQYYFHTQRGVDGLTANRRELCQLLWTLWSPSWAEGPSRYALTAPSFDNPDFVEVVIHSYRHRFMYAPGDPALEYIEQALVPQPAISVPSISLCGADDGVGPPPLVDDDVEHFSGFYRRQVLPGVGHNVFQEAPQVTLEALLELLER
>NZ_CP045767.1|WP_014717849.1|1318196_1320023_-|glycoside-hydrolase-family-15-protein
MVDFKNEPQSAIDAHGIIGDMRSAALVNDRGSIDFFCWPEFDSPSVFCALLDTPEAGTFQLTPDLPNARREQIYLPDTNVLQTRWLSDEAVVEITDLLTVSENVDELPLLIRRVRVVSGKATIHLSCAVRHDYARAATEAKAEAASVVFTANGQPGLRLTGSQPLTLQDNTAIATFTLAQDEGAEFVLGGQEDARVTNDCTDLYLERTLKFWRGWISQSNYRGRWREMVNRSALALKLLTSRKHGAIIAAATFGLPETPGGERNWDYRYTWIRDASFTVYAFMRLGFVEEANAYMRWLRGRVSDCCGQPTKINILYGIDGRQELPETTLDHLSGHGGAQPVRVGNEAFDQIQLDIYGELMDAVYLVNKYGEAISHQGWKHTVEVVDQVCEIWNRKDVGIWEMRGEQHHFLHSRLMCWVALDRAIRLASKRSLPAPFARWDQTRQAIYADIWSNFWNEERGHFVQHIGSTALDGSMLLMPLVRFVAATDPRWLATLEAIQKSLVRDGMVYRYRNDDSQIDGLQGVEGAFAACSFWYVECLARAGQVEKAHLEFEQLLRYANPLGLYAEEFDSQARHLGNTPQALSHLALISAATFLDRKLSGEKTVWQP
>NZ_CP045767.1|WP_020301883.1|1320015_1320816_-|glucose-1-dehydrogenase
MQISLQQQVALVTGASSGIGAGAAKALAAAGAAVVLNYNSQAAPAEALAAQINANGGRALAIGGDVSKEADVERLFAQTLDAFGHLDILVANSGLQKDANLVDMTLEDWNTVIGVNLTGQFLCARAAVRIFNRQGVREGVSRAAGKIIHMSSVHQIIPWAGHVNYAASKGGVEMLMRTLAQEVSEQRIRINGIAPGAIRTAINRAATEGAAEQELLKLIPYGRVGDVEDVANAVVWLASDASDYVVGSTLFIDGGMSLYPEFRGNG
>NZ_CP045767.1|WP_020301884.1|1320963_1321365_+|cytochrome-c
MQARADTRLIKLLVSGVLAVLSLTQTALCLADNSNGKTLYLQRCAVCHGSDIKGTGPLAKKSNPPTPDLTTAAFKKRLHEYPGVIVSSVILRPNGNLIPKTLQDNGVKIAPHAWSVKDFRDLHQYMSEVISNK
>NZ_CP045767.1|WP_032903771.1|1321444_1321945_+|sigma-70-family-RNA-polymerase-sigma-factor
MIPQPPRRTGFFEHYEELIGTWTRRLRNRQQAEDLAHDTFVRVLESAACEVAQPRAYLHQTARNIAVDAYRREDRRETLTLQVADHSTPHSSDPEHYMHAIQLADAIERALAELPLNCRRIFIWQKIEGLTQQEIATRLGLSKNMVEKYMIRTLRHLRDRLDASAP
>NZ_CP045767.1|WP_032903772.1|1321971_1322922_+|FecR-family-protein
MDNRVRDEAAQWFVRLQDGPLSAQERQRFDAWRRSQPAHQYEIDVLQGLWSATDLLPKARLQALGDAPTERLGRRALLRYAVAARVVAVAVGLGAYSGLGQPKPYNAEFSTRLGEHRQVTLPDGSVMDLNSRSVVAVRYEKSRRGVELKQGEAMFSVQHDAERPFVVAAGAGQVTVTGTRFDVRREADQTRVAVEAGTVKVQGRASDHIVTLTAGRGTHVDPQGQVAAAYAVNPEELTAWRSGKLVFNNATLVDVAREVSRYREQPLRVSTAAVGNLRLTSVFKSSDTDALLKALPHILPVALRTLPDGSQEIISR
>NZ_CP045767.1|WP_020301885.1|1323019_1325413_+|TonB-dependent-receptor
MKKLALHNNKISRWAPLALAVAISTAQAAEGIHIRAQSLGAALSQLGQQTSLQVFFSPDMVAGKQAPAVDGNLSPEQALRQLLQGSGLDYQIDAGSVTLRPVRSGTGEAGSPLELGVTDIKVVGDWLADADAEVVQNHPGARTVIRREAMVEQGAMNVGDVLRRVPGVQVQESNGTGGSDISLNVGVRGLTSRLSPRSTVLIDGVPAAFAPYGQPQLSMAPISAGNLESIDVVRGAGSVRYGPQNVGGVINFVTRAIPQDFSGDVGTTLQTSAHGGWKHVENAFIGGTADNGIGAALLYSGVNGNGYRNSNNGNDIDDVIFKTHWAPTDQDDFSLNFHYYDASADMPGGLTQKQFDANPYQSVRDWDNFSGRRKDISFKYIRQIDDRTQAEVLTYYSDSFRGSNIANRDLKTLSSYPRTYYTFGIEPRVSHVFDLGPSTQEVSVGYRYLKEGMHEEATSLNLVNNVPTPGGQSDGHVYQDRTGGTEANAFYIDNKIDIGKWTITPGIRFEDIRTEWHDRPVVALNGKRTEEKRREVHNNEPLPALSVMYHVSDAWKLFANYETSFGSLQYFQLGQGGTGDQTANGLNPEKAKTYEVGTRYNDSVWGGEVTLFYIDFSDELQYVSNDVGWTNLGATKHSGIEASAHYDLSNLDPRLDGLTANAGFTYTKATSEGDVPFKGRDLPLYSRQVATLGLRYDVNHWTHNLDVYAQSGQRAPGTGTTYITQGTADGQYGDIPGYVSVNVRSGYDFGAQLSNLKLGVGVKNVFDQQHYTRSSDNNAGLYLGEPRTFFVQASVGF

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Crispr_ID: NZ_CP045767_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045767_5

1354283-1354386

Orphan

Consensus_repeat	Method
CGATCCAACTGTGGGAGCTGGCTCGCCTGCGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045767_5

>merge|NZ_CP045767|5|1354283-1354386|CRISPRCasFinder
CGATCCAACTGTGGGAGCTGGCTCGCCTGCGATGGCGGCCTGCCAGGCGACGGCTATCTACCTGACACCCCACGATCCAACTGTGGGAGCTGGCTTGCCTGCGA

>NZ_CP045767|5|5|1354283-1354386|CRISPRCasFinder
CGATCCAACTGTGGGAGCTGGCTCGCCTGCGA	TGGCGGCCTGCCAGGCGACGGCTATCTACCTGACACCCCA
CGATCCAACTGTGGGAGCTGGCTTGCCTGCGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045767.1\|WP_014717952.1\|1356838_1357348_+\|DUF1993-domain-containing-protein	unknown	unknown	gnl\|CDD\|370447
NZ_CP045767.1\|WP_032903784.1\|1352188_1352371_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045767.1\|WP_003190275.1\|1346428_1347751_+\|TRAP-transporter-large-permease-subunit	unknown	unknown	gnl\|CDD\|224967
NZ_CP045767.1\|WP_032903782.1\|1349632_1350946_-\|tRNA-5-hydroxyuridine-modification-protein-YegQ	unknown	unknown	gnl\|CDD\|237969
NZ_CP045767.1\|WP_032903696.1\|1357528_1360789_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045767.1\|WP_014717956.1\|1363481_1364384_-\|transcriptional-activator-NhaR	unknown	unknown	gnl\|CDD\|176120
NZ_CP045767.1\|WP_153649497.1\|1355399_1355693_-\|transposase	unknown	unknown	gnl\|CDD\|366690
NZ_CP045767.1\|WP_014717950.1\|1353421_1354240_+\|shikimate-5-dehydrogenase	unknown	unknown	gnl\|CDD\|183587
NZ_CP045767.1\|WP_019818667.1\|1344054_1346202_-\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|223910
NZ_CP045767.1\|WP_014717958.1\|1364801_1365551_+\|TerC-family-protein	unknown	unknown	gnl\|CDD\|223930
NZ_CP045767.1\|WP_032903698.1\|1356070_1356721_-\|DUF480-domain-containing-protein	unknown	unknown	gnl\|CDD\|377312
NZ_CP045767.1\|WP_014717944.1\|1342612_1343926_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|340430
NZ_CP045767.1\|WP_014717949.1\|1352462_1352657_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045767.1\|WP_014717957.1\|1364518_1364770_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045767.1\|WP_014717954.1\|1360860_1362081_-\|serine/threonine-transporter-SstT	unknown	unknown	gnl\|CDD\|184190
NZ_CP045767.1\|WP_020302054.1\|1362322_1363477_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|225371
NZ_CP045767.1\|WP_019818663.1\|1351117_1352185_+\|AI-2E-family-transporter	unknown	unknown	gnl\|CDD\|223701
NZ_CP045767.1\|WP_032892489.1\|1347930_1349610_+\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|223910
NZ_CP045767.1\|WP_138726256.1\|1354539_1355424_-\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP045767.1\|WP_019818659.1\|1352890_1353265_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371451

Protein	Function_ID	Function_description	E-value
NZ_CP045767.1\|WP_014717952.1\|1356838_1357348_+\|DUF1993-domain-containing-protein	gnl\|CDD\|370447	pfam09351, DUF1993, Domain of unknown function (DUF1993). This family of proteins are functionally uncharacterized.	4.8924e-89
NZ_CP045767.1\|WP_003190275.1\|1346428_1347751_+\|TRAP-transporter-large-permease-subunit	gnl\|CDD\|224967	COG2056, COG2056, Predicted permease [General function prediction only].	0
NZ_CP045767.1\|WP_032903698.1\|1356070_1356721_-\|DUF480-domain-containing-protein	gnl\|CDD\|377312	pfam04337, DUF480, Protein of unknown function, DUF480. This family consists of several proteins of uncharacterized function.	3.62476e-73
NZ_CP045767.1\|WP_014717956.1\|1363481_1364384_-\|transcriptional-activator-NhaR	gnl\|CDD\|176120	cd08429, PBP2_NhaR, The C-terminal substrate binding domain of LysR-type transcriptional activator of the nhaA gene, encoding Na+/H+ antiporter, contains the type 2 periplasmic binding fold. NhaR is a positive regulator of the LysR family and is known to be an activator of the nhaA gene encoding a Na(+)/H(+) antiporter. In Escherichia coli, NhaA is the vital antiporter that protects against high sodium stress, and it is essential for growth in high sodium levels, while NhaB becomes essential only if NhaA is not available. The nhaA gene of nhaAR operon is induced by monovalent cations. The nhaR of the operon activates nhaAR, as well as the osmC transcription which is induced at elevated osmolarity. OsmC is transcribed from the two overlapping promoters (osmCp1 and osmP2) and that NhaR is shown to activate only the expression of osmCp1. NhaR also activates the transcription of the pgaABCD operon which is required for production of the biofilm adhesion, poly-beta-1,6-N-acetyl-d-glucosamine (PGA) .Thus, it is suggested that NhaR has an extended role in promoting bacterial survival. This substrate-binding domain has significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	8.39283e-121
NZ_CP045767.1\|WP_153649497.1\|1355399_1355693_-\|transposase	gnl\|CDD\|366690	pfam01527, HTH_Tnp_1, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family consists of various E. coli insertion elements and other bacterial transposases some of which are members of the IS3 family.	3.52483e-07
NZ_CP045767.1\|WP_014717950.1\|1353421_1354240_+\|shikimate-5-dehydrogenase	gnl\|CDD\|183587	PRK12550, PRK12550, shikimate 5-dehydrogenase; Reviewed.	0
NZ_CP045767.1\|WP_019818667.1\|1344054_1346202_-\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	4.79648e-80
NZ_CP045767.1\|WP_014717958.1\|1364801_1365551_+\|TerC-family-protein	gnl\|CDD\|223930	COG0861, TerC, Membrane protein TerC, possibly involved in tellurium resistance [Inorganic ion transport and metabolism].	4.27189e-75
NZ_CP045767.1\|WP_032903782.1\|1349632_1350946_-\|tRNA-5-hydroxyuridine-modification-protein-YegQ	gnl\|CDD\|237969	PRK15452, PRK15452, putative protease; Provisional.	0
NZ_CP045767.1\|WP_014717944.1\|1342612_1343926_+\|sensor-histidine-kinase	gnl\|CDD\|340430	cd16954, HATPase_PhoQ-like, Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Escherichia coli PhoQ and Providencia stuartii AarG. This family includes histidine kinase-like ATPase (HATPase) domain of two-component sensor histidine kinases similar to Escherichia coli PhoQ and Providencia stuartii AarG. PhoQ is the histidine kinase (HK) of the PhoP-PhoQ two-component regulatory system (TCS), which responds to the levels of Mg2+ and Ca2+, controls virulence, mediates the adaptation to Mg2+-limiting environments, and regulates numerous cellular activities. Providencia stuartii AarG is a putative sensor kinase which controls the expression of the 2'-N-acetyltransferase and an intrinsic multiple antibiotic resistance (Mar) response in Providencia stuartii. The AarG product is similar to PhoQ in that it is able to restore wild-type levels of resistance to a Salmonella typhimurium phoQ mutant. However, the expression of the 2'-N-acetyltransferase gene and of aarP (a gene encoding a transcriptional activator of 2'-N-acetyltransferase) are not significantly affected by the levels of Mg2+ or Ca2+. Most proteins in this group contain a histidine kinase dimerization and phosphoacceptor domain (HisKA); some have an accessory HAMP sensor domain, and some have an intracellular membrane -interaction PhoQ sensor domain.	5.58716e-49
NZ_CP045767.1\|WP_014717954.1\|1360860_1362081_-\|serine/threonine-transporter-SstT	gnl\|CDD\|184190	PRK13628, PRK13628, serine/threonine transporter SstT; Provisional.	0
NZ_CP045767.1\|WP_020302054.1\|1362322_1363477_+\|MFS-transporter	gnl\|CDD\|225371	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism].	3.76574e-78
NZ_CP045767.1\|WP_019818663.1\|1351117_1352185_+\|AI-2E-family-transporter	gnl\|CDD\|223701	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only].	1.37159e-43
NZ_CP045767.1\|WP_032892489.1\|1347930_1349610_+\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	3.59657e-75
NZ_CP045767.1\|WP_138726256.1\|1354539_1355424_-\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	2.25352e-55
NZ_CP045767.1\|WP_019818659.1\|1352890_1353265_-\|hypothetical-protein	gnl\|CDD\|371451	pfam11285, DUF3086, Protein of unknown function (DUF3086). This family of proteins with unknown function appears to be restricted to Cyanobacteria.	0.00387162

>NZ_CP045767.1|WP_014717950.1|1353421_1354240_+|shikimate-5-dehydrogenase
MQMHPNKDTQLCMSLSARPGNFGLRFHNHLYEQLGLNFYYKAFSSQDLPGAIGGIRALGVRGCGVSMPFKEAAIALVDELDDSVQAIDSLNTIVNTNGHLKAYNTDYIAIEQLLKKHAVPKDSSFALRGSGGMAKAVASALRDGGYANGVIVARNEVAGQALARNLGYAWQADLGSLRPQMLINVTPIGMTGGAEADALAFDAEAIDQAETVFDVVAIPAETPLIVRGRAQGKRVITGLEVIAIQALEQFVLYTGVRPTQEQFEAAVAFARS
>NZ_CP045767.1|WP_019818659.1|1352890_1353265_-|hypothetical-protein
MTIMRKLPRIALLIGALAMAGQASAHGGGWGGPAVFGALVGAAVVGSVVASQPREVYVQQPVYVQPQPVYAAPPPVYYAPPPPVYVQQQVYYRPAPVYYGPPRGYYGPPRGYYGPPHGYYRHGW
>NZ_CP045767.1|WP_014717949.1|1352462_1352657_-|hypothetical-protein
MPTQNPHRTAGLCTSSKVYNALTELKHLEGHRSAKFLALLAENLVRKGLLSEHEVVNMLDQVVD
>NZ_CP045767.1|WP_032903784.1|1352188_1352371_-|hypothetical-protein
MPTVQIMSVIGSAVPAPLRKLGLLACWYVVRDGEPISGPLTSLSDAETQRRMATDFSLEA
>NZ_CP045767.1|WP_019818663.1|1351117_1352185_+|AI-2E-family-transporter
MNQTNLQFKTLLLLLALVTVAFIWILLPFYGAVFWAVILGIIFAPMQRRLQQRFSWNRNLTSLTTLMVCLVIAILPVIITSALLVQEGATLYKNIESGKLDVAGYIEQFKNVLPPYFQQLLDRFGMGNLEGLREKVVKGAMQGSQFFASQAFSFGQGTFDFLVSFFIMLYLLFFLLRDGPELVRKVRTAVPLAEPQKRRLQLKFNRVVRATVKGNVLVAVTQGALGGLIFWFLDIPSALLWAVLMAFLSLLPAVGAGLVWGPVAVYFLLSGSIWQGVVLGLFGVFVIGLVDNVLRPILVGKDTKMPDYLILISTLGGLSVFGLNGFVIGPLVAALFMSCWALFVETKPRVKLPLP
>NZ_CP045767.1|WP_032903782.1|1349632_1350946_-|tRNA-5-hydroxyuridine-modification-protein-YegQ
MPSMIAPELLAPAGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFDHANLALGIQEAHDQGKRFYVVVNIAPHNAKLKTFLKDLAPVIAMGPDALIMSDPGLIMLVRQHFPQMPIHLSVQANTVNWASVAFWQQQGICRVILSRELSLEEIGEIRQQVPAMELEVFVHGALCMAYSGRCLLSGYMNKRDANQGTCTNACRWKYQATPAVENATGDIVHEYQPTLGIGTPTDQVFLLQEANRPDEPMPAFEDEHGTYIMNAKDLRAVQHVERLAQMGVHSLKIEGRTKSHFYCARTTQVYRQAIDDAVAGRAFDRGLMTNLESLAQRGYTEGFLRRHVHDEYQNYQNGSSVSERQQFVGELTGERRGALAEVKVKNRFALGDHLELMTPAGNFHFDLPSLHNAKGESIEVAPGDGHTVYVPIPAQMDLRFGLLMRDV
>NZ_CP045767.1|WP_032892489.1|1347930_1349610_+|methyl-accepting-chemotaxis-protein
MRLSLKAKVLALAVVPVLLFAVVISLTTVWILQGQARNEVDETRQRLLNDAKATLQGYVEVAMTTIKPLYDAAAPGDSAARAQVVKLLSNTSYGKDGYFFGYDSETIRLFKGNSPDGVGKSFKDNRDPNGVYVNRDLVKVGKDGTHYLQYSSTQPGQTELVPKLGYTEYLPKWDMVIGTSVNLDGIDAQVAVVQAKVEKRMQGVLLSILGVAVVVLLVIAAVGMLLANTILRPLHLMKANLDDIAAGEGDLTRRLAITSQDELGDLAGAFNRFVDKIHGLVRQITDMTAQLTGLVSQVSDQAQRSEQAMERQRHETDQVATAINQMSSAAHEVARSAQGAAVAAQQTDAEGQAAKRVVDGSIAQIHALVNDIRSSGVSLDSLQQDVSSIVSVLGVIRSIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALASRTQTSTQEIQGMIDRLQKGTEAAVDAMRRSSDAGDGTSAQANQAGASLDTMAQLIGTINSMNAQIASAAEEQTAVAEEINRSVHQIAVAVDSVADETQLGAQTSRSLADLGQRLGQLVGQFRI
>NZ_CP045767.1|WP_003190275.1|1346428_1347751_+|TRAP-transporter-large-permease-subunit
MINAVIAAVGTMLVLSLSRVHVVIAIIVGALVGGLTGGLGIEATLKAFNGGLGGGATVALSYALLGAFAVAIAKSGLAHALADKALLLVDRQDASGGNHVKWLLIGLLWVVAIASQNILPIHIAFIPLLVPPLLYVLTKLQLDRRLIACVMTFGLITPYMFLPVGFGNIFLNQILLANVAKSGVDISGVNVTHAMGLPALGMVVGLLVAVLISYRKKRVYDLKKIERVEQVAVQYNPLTLLVAGLAIASAFIIQLWLDSMIIGALAGFLIFSVSGIVRWRDTDDLFTEGMKMMAMIGFIMIASSGFAEVLKATGDVNSLVQASAAFIGHSRGVGALLMLLVGLLVTMGIGSSFSTVPILAAIFVPLCVQLGFSPVAIVCIVGTAGALGDAGSPASDSTLGPTSGLNIDGQHHHIWDTVVPTFLHYNLPLLAFGWLAAMTL
>NZ_CP045767.1|WP_019818667.1|1344054_1346202_-|methyl-accepting-chemotaxis-protein
MSLRQLSIQWKITLLAGLCLLGIVTLLVGLSLYRMAQSSQQVKASSMQMLDEAAQSRIEAQGEVQALGIRQQFMDAYQYGHGFSRQVLFLREQAEKRFLDAFDTREDLTRQVKAALQANPDLLGLSLVFEANALDGKDELFANQAELGSNDKGRFALYWSQPTPGKITSMALPESDMADTSIGPSGEKANAWFTCPRTTLKPCVIEPYFYVIDGQNVLMTSIVFPLMVNGKVIASLSVDINLNSLQAVSQQASQKLYDGQTQVSILSPTGLLAGYSPDASKLSQRLEQVDPASGAQLTSALASSTQTHSLRTDHQLKVLAPFAPIPGGKAWGVLLDVPEKVLVAPAEALKNQLDADNAKGTLLELGLGLLAAVVGLILVWLMARSVTRPILGVAHMLEDIASGEGDLTRRLAYAKQDELGQLAGWFNRFLDKLQPIIAEVKRSVQDARGTADQSAAIATQTSAGMEQQYRQVDQVATASHEMSATAQDVARSAAQAAQAARDADQATRQGLTVIDRTTANIGELAADMSTAMTQVEGLAANSEQIGSVLEVIRGIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLARRTQESVEETRLVIEQLQTGTSDVVGSMGNSYRQAQGSVEQVGQAVTALRQIGDAVTVISDMNLQIASAAEEQSAVAEEINSNVATIRDVTESLSEQANESARVSQALNSLANQQQGLMDQFRV
>NZ_CP045767.1|WP_014717944.1|1342612_1343926_+|sensor-histidine-kinase
MRSIQRRLSLGLISVMVIVGVVLAQTSLWLFEAGLQRYLEAGLRNDSENLLVALVRGPNGVQLDEQRLSPAYQRPFSGHYFRIDFADVHWRSRSLWDQELPRLPVAGLKGNLQLGPEGQQLLVLRSDYKRFGQSISISVAQDYTPVRESFRLMRQVGLVMGLAALLLVLILQRVTVRRALRPLETARNQIAQLQQGQRSQLDTQVPLELEPLVAQINHLLAHTEDSLKRSRNALGNLGHALKTPLAVLLSAASSDALKDHPQLSQLLREQLEQVQQRLNRELNRARLAGDALPGALFDCEQELPGLLATLRMIHGEHLDLSYQVAPGLQLPWDREDLLELLGNLLDNACKWADAEVRLSVSETPQGYRLAVEDDGPGIPEAQRDQVFSRGARLDEQRVGHGLGLGIVRDIVEVWGGVLQLQESELGGLKVLIQLPRR
>NZ_CP045767.1|WP_138726256.1|1354539_1355424_-|IS3-family-transposase
MLRQRVQVRYAFVAAERTQYPVRMLCRVMEVSTSGFYDYTHRQPRPDPDAQIRIELRSVYAASRHTYGRPRLVAALRQKSYAVGHKRVSRLMQEEGIHGKSKRGFRPCTTDSNHYLPVANNVVARQFAIDNPTPTWVSDITYLPTREGWLYLAVVLSIQTRQILGYSLSDRMPDGLVESAFLNAWSACSGTSGAVFHSDQGRQYASSKFRLALAKKDFKQSMSRKGNCWDNAVAESFFATLKREEAFGVYPTKKQAQLSIASYVHGFYNSSRLHSALGYRSPNEYAKSLRQKTG
>NZ_CP045767.1|WP_153649497.1|1355399_1355693_-|transposase
MYPSTRRNYTDEFKTQAVALAESVGRTEAARQLEMSVKTLDNWVNATRKGQPLSSPERKPITKEDSELARLRAEVAELKMEREILKTAAVFFARESR
>NZ_CP045767.1|WP_032903698.1|1356070_1356721_-|DUF480-domain-containing-protein
MTAEHDTDTPEPRLNSTEIRILGCLIEKQATNPETYPLTLNALVLACNQKTSREPVMNLSQGQVGQSLRALEGQGFTRLVMGSRADRWEHRVDKALELVPAQVILTGLLFLRGPQTVNELLTRSGRMHDFEDAEQVVHQLERLIARGLALLVPRQAGQREDRYTHALGDPADIEAIMTARGNPVERSAGAVSVERIEELEARIAALEERLTQLEQV
>NZ_CP045767.1|WP_014717952.1|1356838_1357348_+|DUF1993-domain-containing-protein
MTISLYAASIPVFKQMLNALSDVLNKAEAHASAKNIEPNALLQARLFPDMFPLVRQVQIAVDFAKGVSARLAEIEVPKYEDNEVTFADLQALIAKVLAFVDTIKPEQIDGKEGIEIITRPGTPKEKRFSGQSYLLTYGLPQFFFHITTAYALLRHNGVEVGKRDYMGAF
>NZ_CP045767.1|WP_032903696.1|1357528_1360789_+|hypothetical-protein
MQLSSSALTSTTHNAYFEDTRNTSVSQDSSSRSFATSRTRREAPGNEAVLSTSDRAQADSELAARYAEALESRARDEHTIIPNIPDASSLGQWRTQLRNTFEDPYLAYVLKRQGLDPTTMEIAPDGTLSVKEKNGAIARFTLKDHPRWALYAGPILAALKAYAPDGISYSAVRAESVPLKLIAQFYGETIHNDSTEDRARAQALQKNNAFATSGVGQARSEETLMLQKQQLADRRDLQAFQDALVEANAKVGKYLDQQERLHQSNLSFRPGFQPPYDREAGFLSYLQSQLFTIGPESGFHLDNQPMAGRQVNLLQFMTANGWKHPVNTEEMRQIGLSLAELQYPQRRQDLGGGLAWPTPLDTTQQQAIYDAVSYNAMGLPEFDQLKLSQNAFGYLTQTIQWSEAELKDPRQAILRLLQSPAAQSLGEALRDKFEGVGSVEDWVLSALQIGLNQDALWKPGEKNKVAGFDLSARENWGKPLSFVLKGLTDHLSKSYGGNAPVAAYLPLSHHAPELLVKDVPDHVTYGSPGWVSLKSIVAKAEMRSPGVAATKTYEQLLKDDLRPIDDAGIQVEALAAREGLIHWAVADGAIEKREDNNYTDEEIERAGVLANERFELLTTASEAQRTILHSRSELGLSILRARFPEETYGKIDFEKKTIYPTEKHRDLKGPYSILDIYSAPQQHVRWFSNDPAVPIEKIAADVHEMGSLNEAFESHVLEYFDGFKDAMSVNVKHQMSLLPQEDQEALQHGALKIYGEEKVTQTITSAGYKIQYDVSETEEVKSSSVFLETLHKGKKRIYEFNPATGGLQHRADLAEGLKTGLQGEWSPVATNKPKVRVRSNTKISEINANDSAERKERESKLQTSSPTQAFSSQRTQHIADAVTRHFFRADERETVVNAARGVTTFDTEVTEFEKIQAVTRALIPGASALHSFQQGRVGEGLKFLAFDVFGFVVAGAGAVGKISKIAKVGGQLGRGGVTGRLGRAFISAANPFAGGAAIGTRGLTAFSSVVGKLSLGWKSVAANISVNRVFQHKPKNVMVGTSAGEDATKIIAQLDSVSGKWYRFNPQTNERYGMPLQGFTAATSPS
>NZ_CP045767.1|WP_014717954.1|1360860_1362081_-|serine/threonine-transporter-SstT
MTAAPSLLQRLMRVSLVTQIVIGLIAGIVLALLFPEAARATGFIGKVFVTALKAVAPILVFVLVMASIANHKHGQETHIRPILFLYLLGTFSAAVVAVVASMLFPSALVLVTHDATVSAPGGIGEVLQSLLLSVVDNPVSALMNANFIGILAWAIGMGIAIRHAGETTRTVLDDLSNGVTLIVRVVIRFAPLGIFGLVASTLATSGFGALLGYAHLLVVLIGCMLFVALVINPAIVFWKLRRNPYPLVLMCLRESGITAFFTRSSAANIPVNLALSKRLGLHEDTYSVSIPLGATINMAGAAITITVLTLAAVHTLGITVDLPTAVLLSVVAAICACGASGVAGGSLLLIPLACSLFGIPSEIAMQVVAVGFIIGVLQDSAETALNSSTDVLFTAAACLGKEDQTA
>NZ_CP045767.1|WP_020302054.1|1362322_1363477_+|MFS-transporter
MLFPILLLSAAGFTVLTTEFVIVGLLPSIARDLNVSVSQAGLLVTLFAFTVAAFGPFLTAYCARFPRKRLFISILIMFAAANTVAALAPNIWVMALARLIPALGLPVFWALASETAVDIVGPEFAGRAIEKIGFGIVCATVFGIPVGTLISDMFGWRTAFAVLAVIALAKALLLYVYLPVTPAKHQQASLRSQFKILRSPVMQGHILLSILVFSGMFTAYTYLADILERLAGFDGTLVGWCLMGFGAVGLIGNSLGGRAVDRHPLIASMVFCGFMIAGMVAVVPAIHSTIGLAAAMAVWGVTQAAMFLVSHVRLMKAAPHAPAFAASLNIAGANLGIGLGAMVGGHVIDTLGLGSLGFAASGFILVSILLALWLMTAKPTALNA
>NZ_CP045767.1|WP_014717956.1|1363481_1364384_-|transcriptional-activator-NhaR
MLNYRQLHYFWVVAKTGSIVRACEQLNLTPQTISGQISLLEQTFGIALFQRVGRQLELTEAGRQALPYAEQMFQTGNELEAMLRAQPDEQQIPFRVGVADVVPKSIVYRLIAPTMELSEPIRITCREDKLERLLADLAIQRLDLVISDSPMPTHLDIKGYSQKLGECGISFFATQTLADQHGGDFPQCLQGAPLLIPGAETVVRSRLQRWFAEQQIQPRIIGEFDDSALMQAFGQSGSGIFIAPSVIADEVVRQYGVALIGQTDAVTESFYAISVERKVKHPGIVAITEGARRELFTALP
>NZ_CP045767.1|WP_014717957.1|1364518_1364770_+|hypothetical-protein
MKLNSLGAASLLALSLIGVSGCDQVEKSAQQVLGKATESAKQAIDDTHKAAEQALSEATQGLISPEKQEKDAENAAESDTKET
>NZ_CP045767.1|WP_014717958.1|1364801_1365551_+|TerC-family-protein
MDYLLQLAASPTAWVALATLIVMEIVLGIDNLIFISILTNKLPEKHRAKARRIGISMALILRLGLLSTIAFIVQLTTPVFEVFGQAFSWKDMILIAGGLFLVWKATTEIHHSMDPEPEEKATVSNTVTIGFAAAIGQILMLDLVFSIDSIITAVGMTEHLPIMIIAVVVSVIVMLVAAEPLAKFINDNPTVVMLALGFLIMIGMTLIAEGFGAHVPKGYVYAAMAFSAAIECLNIARRNRHARLLAARQ

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Crispr_ID: NZ_CP045767_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045767_6

1748328-1748422

Orphan

Consensus_repeat	Method
GGCTTGCCTGCGAAGGCGGCCTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045767_6

>merge|NZ_CP045767|6|1748328-1748422|CRISPRCasFinder
GGCTTGCCTGCGAAGGCGGCCTGAAGGCCGACACCTATCTATCTGACCCTACGCGATCCAAATGTGGGAGCTGGCTTGCCTGCGAAGGCGGCCTG

>NZ_CP045767|6|6|1748328-1748422|CRISPRCasFinder
GGCTTGCCTGCGAAGGCGGCCTG	AAGGCCGACACCTATCTATCTGACCCTACGCGATCCAAATGTGGGAGCT
GGCTTGCCTGCGAAGGCGGCCTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045767.1\|WP_014718149.1\|1747708_1748200_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP045767.1\|WP_020301876.1\|1749004_1750420_-\|cytosine-permease	unknown	unknown	gnl\|CDD\|271377
NZ_CP045767.1\|WP_032903519.1\|1758840_1759722_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176114
NZ_CP045767.1\|WP_014718154.1\|1753626_1754037_-\|RidA-family-protein	unknown	unknown	gnl\|CDD\|223329
NZ_CP045767.1\|WP_014718157.1\|1756157_1757996_+\|amidohydrolase	unknown	unknown	gnl\|CDD\|224490
NZ_CP045767.1\|WP_032903520.1\|1754060_1755350_-\|SidA/IucD/PvdA-family-monooxygenase	unknown	unknown	gnl\|CDD\|274942
NZ_CP045767.1\|WP_014718145.1\|1743591_1744728_-\|PAS-domain-containing-sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_CP045767.1\|WP_014718146.1\|1744717_1745533_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_CP045767.1\|WP_003191905.1\|1758025_1758643_+\|hydrolase	unknown	unknown	gnl\|CDD\|238494
NZ_CP045767.1\|WP_020301857.1\|1740861_1741659_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187602
NZ_CP045767.1\|WP_032903523.1\|1742791_1743595_+\|diaminopimelate-epimerase	unknown	unknown	gnl\|CDD\|234768
NZ_CP045767.1\|WP_032903522.1\|1750670_1751582_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176104
NZ_CP045767.1\|WP_032903526.1\|1739839_1740850_+\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381378
NZ_CP045767.1\|WP_153649610.1\|1755570_1756161_+\|antibiotic-biosynthesis-monooxygenase	unknown	unknown	gnl\|CDD\|225765
NZ_CP045767.1\|WP_014718148.1\|1746980_1747379_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045767.1\|WP_032903524.1\|1742137_1742635_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|223718
NZ_CP045767.1\|WP_014718152.1\|1751795_1752941_-\|acetylornithine-deacetylase	unknown	unknown	gnl\|CDD\|236039
NZ_CP045767.1\|WP_032903521.1\|1752937_1753615_-\|DUF1028-domain-containing-protein	unknown	unknown	gnl\|CDD\|377639
NZ_CP045767.1\|WP_032903525.1\|1741684_1742095_+\|SRPBCC-family-protein	unknown	unknown	gnl\|CDD\|176863
NZ_CP045767.1\|WP_020301862.1\|1745665_1746859_+\|YgcG-family-protein	unknown	unknown	gnl\|CDD\|224429

Protein	Function_ID	Function_description	E-value
NZ_CP045767.1\|WP_014718149.1\|1747708_1748200_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	6.4858e-12
NZ_CP045767.1\|WP_020301876.1\|1749004_1750420_-\|cytosine-permease	gnl\|CDD\|271377	cd11484, SLC-NCS1sbd_CobB-like, nucleobase-cation-symport-1 (NCS1) transporter CobB-like; solute-binding domain. This NCS1 subfamily includes Escherichia coli CodB (cytosine permease), and the Saccharomyces cerevisiae transporters: Fcy21p (Purine-cytosine permease), and vitamin B6 transporter Tpn1. NCS1s are essential components of salvage pathways for nucleobases and related metabolites; their known substrates include allantoin, uracil, thiamine, and nicotinamide riboside. NCS1s belong to a superfamily which also contains the solute carrier 5 family sodium/glucose transporters (SLC5s), and solute carrier 6 family neurotransmitter transporters (SLC6s).	4.63561e-71
NZ_CP045767.1\|WP_032903519.1\|1758840_1759722_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176114	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain. This CD includes the substrate binding domain of LysR-type transcriptional regulator (LTTR) CrgA and its related homologs. The LTTRs are acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes such as amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to name a few. In contrast to the tetrameric form of other LTTRs, CrgA from Neisseria meningitides assembles into an octameric ring, which can bind up to four 63-bp DNA oligonucleotides. Phylogenetic cluster analysis further showed that the CrgA-like regulators form a subclass of the LTTRs that function as octamers. The CrgA is an auto-repressor of its own gene and activates the expression of the mdaB gene which coding for an NADPH-quinone reductase and that its action is increased by MBL (alpha-methylene-gamma-butyrolactone), an inducer of NADPH-quinone oxidoreductase. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	6.52311e-86
NZ_CP045767.1\|WP_014718154.1\|1753626_1754037_-\|RidA-family-protein	gnl\|CDD\|223329	COG0251, TdcF, Putative translation initiation inhibitor, yjgF family [Translation, ribosomal structure and biogenesis].	2.59228e-35
NZ_CP045767.1\|WP_014718157.1\|1756157_1757996_+\|amidohydrolase	gnl\|CDD\|224490	COG1574, COG1574, Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only].	0
NZ_CP045767.1\|WP_032903520.1\|1754060_1755350_-\|SidA/IucD/PvdA-family-monooxygenase	gnl\|CDD\|274942	TIGR04046, predicted_flavoprotein_involved_in_K+_transport, flavin-dependent oxidoreductase, MSMEG_0569 family. Members of this protein family belong to a conserved seven-gene biosynthetic cluster found sparsely in Cyanobacteria, Proteobacteria, and Actinobacteria. Distant homologies to characterized proteins suggest that members are enzymes dependent on a flavinoid cofactor.	2.08541e-125
NZ_CP045767.1\|WP_014718145.1\|1743591_1744728_-\|PAS-domain-containing-sensor-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	9.24411e-39
NZ_CP045767.1\|WP_014718146.1\|1744717_1745533_-\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	1.45104e-29
NZ_CP045767.1\|WP_003191905.1\|1758025_1758643_+\|hydrolase	gnl\|CDD\|238494	cd01012, YcaC_related, YcaC related amidohydrolases; E.coli YcaC is an homooctameric hydrolase with unknown specificity. Despite its weak sequence similarity, it is structurally related to other amidohydrolases and shares conserved active site residues with them. Multimerisation interface seems not to be conserved in all members.	1.81509e-69
NZ_CP045767.1\|WP_032903526.1\|1739839_1740850_+\|aldo/keto-reductase	gnl\|CDD\|381378	cd19152, AKR_AKR15A, AKR15A family of aldo-keto reductase. The AKR15 family includes Microbacterium luteolum pyridoxal 4-dehydrogenase (PLD), Pseudomonas sp. D-threo-aldose 1-dehydrogenase (FDH), and similar proteins. PLD (EC1.1.1.107) catalyzes irreversible oxidation of pyridoxal. FDH(EC1.1.1.122), also called (2S,3R)-aldose dehydrogenase, or L-fucose dehydrogenase, catalyzes the oxidation of L-fucose to L-fuconolactone in the presence of NADP(+). It is also active against L-galactose, and to a much lesser degree, D-arabinose. FDH (EC1.1.1.122), also called (2S,3R)-aldose dehydrogenase, or L-fucose dehydrogenase, catalyzes the oxidation of L-fucose to L-fuconolactone in the presence of NADP(+). It is also active against L-galactose, and to a much lesser degree, D-arabinose.	1.42918e-146
NZ_CP045767.1\|WP_032903523.1\|1742791_1743595_+\|diaminopimelate-epimerase	gnl\|CDD\|234768	PRK00450, dapF, diaminopimelate epimerase; Provisional.	9.68618e-85
NZ_CP045767.1\|WP_020301857.1\|1740861_1741659_+\|SDR-family-oxidoreductase	gnl\|CDD\|187602	cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR. This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs.	1.14522e-49
NZ_CP045767.1\|WP_153649610.1\|1755570_1756161_+\|antibiotic-biosynthesis-monooxygenase	gnl\|CDD\|225765	COG3224, COG3224, Uncharacterized protein conserved in bacteria [Function unknown].	2.47707e-32
NZ_CP045767.1\|WP_032903522.1\|1750670_1751582_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176104	cd08412, PBP2_PAO1_like, The C-terminal substrate-binding domain of putative LysR-type transcriptional regulator PAO1-like, a member of the type 2 periplasmic binding fold protein superfamily. This family includes the C-terminal substrate domain of a putative LysR-type transcriptional regulator from the plant pathogen Pseudomonas aeruginosa PAO1and its closely related homologs. The LysR-type transcriptional regulators (LTTRs) are composed of two functional domains joined by a linker helix involved in oligomerization: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal substrate-binding domain, which is structurally homologous to the type 2 periplasmic binding proteins. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcriptional repressor undergoes a conformational change upon substrate binding which in turn changes the DNA binding affinity of the repressor. The genes controlled by the LTTRs have diverse functional roles including amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of N2 fixing bacteria, and synthesis of virulence factors, to a name a few. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the substrate-binding domains from ionotropic glutamate receptors, LysR-like transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	7.54952e-84
NZ_CP045767.1\|WP_032903524.1\|1742137_1742635_-\|AAA-family-ATPase	gnl\|CDD\|223718	COG0645, COG0645, Predicted kinase [General function prediction only].	8.22142e-15
NZ_CP045767.1\|WP_014718152.1\|1751795_1752941_-\|acetylornithine-deacetylase	gnl\|CDD\|236039	PRK07522, PRK07522, acetylornithine deacetylase; Provisional.	0
NZ_CP045767.1\|WP_032903521.1\|1752937_1753615_-\|DUF1028-domain-containing-protein	gnl\|CDD\|377639	pfam06267, DUF1028, Family of unknown function (DUF1028). Family of bacterial and archaeal proteins with unknown function. Some members are associated with a C-terminal peptidoglycan binding domain. So perhaps this could be an enzyme involved in peptidoglycan metabolism.	7.52511e-85
NZ_CP045767.1\|WP_032903525.1\|1741684_1742095_+\|SRPBCC-family-protein	gnl\|CDD\|176863	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins. The PYR/PYL/RCAR-like family belongs to the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain superfamily of proteins that bind hydrophobic ligands. SRPBCC domains have a deep hydrophobic ligand-binding pocket. PYR/PYL/RCAR plant proteins are receptors involved in signal transduction. They bind abscisic acid (ABA) and mediate its signaling. ABA is a vital plant hormone, which regulates plant growth, development, and response to environmental stresses. Upon binding ABA, these plant proteins interact with a type 2C protein phosphatase (PP2C), such as ABI1 and ABI2, and inhibit their activity. When ABA is bound, a loop (designated the gate/CL2 loop) closes over the ligand binding pocket, resulting in the weakening of the inactive PYL dimer and facilitating type 2C protein phosphatase binding. In the ABA:PYL1:ABI1 complex, the gate blocks substrate access to the phosphatase active site. A conserved Trp from PP2C inserts into PYL to lock the receptor in a closed formation. This group also contains Methylobacterium extorquens AM1 MxaD. The mxaD gene is located within the mxaFJGIR(S)ACKLDEHB cluster which encodes proteins involved in methanol oxidation. MxaD may participate in the periplasmic electron transport chain for oxidation of methanol. Mutants lacking MxaD exhibit a reduced growth on methanol, and a lower rate of respiration with methanol.	1.20697e-42
NZ_CP045767.1\|WP_020301862.1\|1745665_1746859_+\|YgcG-family-protein	gnl\|CDD\|224429	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only].	3.66308e-53

>NZ_CP045767.1|WP_014718149.1|1747708_1748200_-|GNAT-family-N-acetyltransferase
MPTLTLRNALPTDAARCFEIETSAYEGDEAATLEKITTRIAQYPEGFLILEEDGAVVGFINSGCAHEVVMSDEAFKELVGHVAEAPNVVIMSVVVDPAHQGKGYAKRLMTEFVQRMQAMGKRTLHLMCKAQHVPLYRAMGYTYVRPSPSDHGGMAWHEMVKTL
>NZ_CP045767.1|WP_014718148.1|1746980_1747379_-|hypothetical-protein
MSSINGSAPFVPAYQPAAKHPIDNDVPRKNSLDKQAGEDAEVSNGKGGWKNIGNATRDHANRTRLDRNFLPSDKKTVDDAQVNTRAGYHGTGTLPAFPTWDDKALNDSASNALRQPIDFEIKPDGNGGWTKA
>NZ_CP045767.1|WP_020301862.1|1745665_1746859_+|YgcG-family-protein
MIVLVRQSVFSLLALVFSSLFIAAHADTSPIGVALDQRVIDLTNTLDSGTVLRLKQQLADLEQRKGAQVAVLLVPTTGSSGIEDYANQLFRAWKLGRKDVNDGILLVVAKADRTVRIEVGYGLEGIVTDLLAHRIIEERLTPAFRQGDFAGGIQQGVSALVVLVDGGDLPEVAGPGINPQFFAILAAFVLGALAGTLIAAGKLHWRRALIIAVAATLLLTVLAGGRDWPMFLVAMPLTLLIGGALFGALWQVRTLFYGVIGLLGYILGLVVANHYVDVSFTHWLLWPLGVLVVLGLYLVLVLLMRQTWRTSRAGFSVRLLAAVAVYGVAGQVMDGDRDAWLLAFPIASFVALIIFGKVGEGSGSGGGSSSGSSGSSTSSSSSGGGGSSGGGGASGSW
>NZ_CP045767.1|WP_014718146.1|1744717_1745533_-|alpha/beta-hydrolase
MDLRHRNNIHVMGHGPSTLVFSHGFGCNQAMWNALAPHFLERFRVVLYDLVGAGLSDLSAFDKTKYSRLDGYAHDLNEIIDAYAQGPVILVGHSVSAMIGTLADRFLPGRIAAHVMIGPSPRYIDTEEYVGGFQRDDIDDLLDTLDSNYLGWSSAMAPVIMGAPTQPHLSEALTESFCRTEPDIAKQFARVTFLSDNRQDVFGLTTPVLILQSTDDLIAPVAVGEYLHAVLPNSTYCLVENVGHCPHMSAPQACATAMDRFLAPWAAADAR
>NZ_CP045767.1|WP_014718145.1|1743591_1744728_-|PAS-domain-containing-sensor-histidine-kinase
MPVDPLFDSAACALAVTQEDGTILHVNPRLCDWLGFTAAQLLGRRFQDLLAMGGRIFYQTHLAPMLRMHGSVTEVKLDIRHCNGHKVTVLLNANRRQQPDGVVYDLALFGTTDRDKYERELLNAHKQAEALLQEKTATELALQQAQAELSEAYAIAQRRALFAEQMVAIVSHDLKNPLTAIRMASDFLQRGERTAKERQLLGHIGQSSERAHRMIADLLDFTQARVGQGITIKPQPLDLHSVIHRSVDELRVAFPKATLVHHAEGQGDACLDADRVQQMIGNLVANSVAYGDLLQPITITSRLGDNTCAVAVHNHGPAIPQTLLAGLFEPMTRGTDQGSDVRSVGLGLYIVRELARVHGGDVAVSSCASAGTTFTVKF
>NZ_CP045767.1|WP_032903523.1|1742791_1743595_+|diaminopimelate-epimerase
MTLPFVKMHAHGDDFIIIDRRGEDNPITAQIARHLGNRRTGIGFNQLAVVLDCEEAAARVQFWNPDGTRLQTCGSATRGVADRLMHEAGTQSIVLGSDRGLLTCTRADGQRVSVDMGPPSLDWASVPLARAMDTCVLPIDGQPAACSMGNPHCTFFVEDVTALDIEAMGPSLEVHPLFPARTNVHFVQVLDRGHIRLRIWERGGGVPLGSGSCCCAAVVNGIRRGLLDERVEVQCDGGAVTVQWDGRGGVILTGRVEPIMQGTAYLY
>NZ_CP045767.1|WP_032903524.1|1742137_1742635_-|AAA-family-ATPase
MLIVFSGLPGSGKTTIARELARQLGAVYLRIDVIEQALREAAVLVGDVGASGYAVANALALSNLRLGQRVIADCVNPVKDSRDAWQAVATAAGVALINIEVVCTDQQAHRRRVEGRVGDIPGLVPPTWESVQAHEYERWETPPFRLDTAQMTSAEAVAAALLHIG
>NZ_CP045767.1|WP_032903525.1|1741684_1742095_+|SRPBCC-family-protein
MATASSVIEIAVSADQVWQLIGGFNSLPDWLPLIAKSEPSEGGRVRHLTTADGGAIVERLQTFDNVARTYSYTIEASPFPVSAYLATLQVEALTDTSAKVTWSGVFTPAAGTTEAQVEALFAGVYEGGLEALRGNF
>NZ_CP045767.1|WP_020301857.1|1740861_1741659_+|SDR-family-oxidoreductase
MKIDVSGKVAIVSGSTAGIGLGISQALAQSGATVVVIGRDAGKVDDALASIRQAVPAAQLRGVVADLGTVEGAQKLFAAEPRADILVNNLGIFDAVDFFDAPDSEWARFYEVNVISGVRLARHYVPGMVEQGWGRVIFVSSESGVATPADMINYGVTKSANLAVSHGLAKRLAGTGVTVNAILPGPTFTDGLEHMLKDATAESGRSAREEADVFVRHARPTSIIQRAANVDEVANLVAYIASPLSSATTGAALRVDGGVVDSMAI
>NZ_CP045767.1|WP_032903526.1|1739839_1740850_+|aldo/keto-reductase
MSLKDTLPGVLGFGTAPLGNMFRAIPEEEAQATVEAAWSHGVRYFDTAPFYGSGLSEIRLGQALSNYHRDDYVLSTKVGRVILDEVEETARDLGEKSGVFEHGRPNKIINDYSADATLRSIEDSLTRLQTDRLDIVWVHDIAQDFYGDQWLEYFNQARTGAFKVLTRLREQGVIKAWGLGVNRVEPCELTLDLAEAQPDGFLLAGRYTLLDHDRALQRLMDAAHAQQVEIVVGGPYSSGILAGGAHFEYQQAGPAIIAKVEQIKAIAQAFGVSIKAAALQFSLAHPAVAAVIPGASRPGRIAEDVAALSEQIPAAFWQALREAGLISDRAPLPLSR
>NZ_CP045767.1|WP_020301876.1|1749004_1750420_-|cytosine-permease
MVTTATSSAPLIEKHTIGYVPPEDRHGKVRDLFTLWFGGNIAPLPIVTGALGVQLFHLNLVWGIVAILVGHLVGGVLMALHSAQGPQMGIPQMIQSRAQFGSLGALLVVVIAGVMYIGFFASNIVLAGKSLHGVVDAVPVPVGIVIGAIGSGIIGIIGYRFIHVLNRIGTWVLGAGIVLGFGYIFTHVQTTDFLTRGSFNISGWLATVSLAALWQIAFAPYVSDYSRYLPADVPVAATFWTTYLGSALGSSLAFIFGAVAVLATPVGMDTMDAVKLATGAIGPLMLVLFLLSVISHNALNLYGAVLSIITLVQTFAYRWIPTAKSRAVISIIVLAACSIAAVFASQDFIGHFVDMVLVLLVVLVPWTAINLIDFYAIHKGQYDIASIFRVDGGIYGKYNPQALLAYAVGIVVQIPFMNTPLYVGPISQHINGADLSWVVGLVVTSPLYFWLASRDSAYKRRMDSGKLVSGV
>NZ_CP045767.1|WP_032903522.1|1750670_1751582_+|LysR-family-transcriptional-regulator
MAAYNLRQLRYFVTTAECGSVAEASRKLYIAQPSVSTAIKQLEDSFGVQLFIRHHAQGVSLTPSGARFYRKALELLRVAHEFEQNALADNDVVAGQIDIGCFETVAPLYLPCLIAGFKARWPGVEIRIRDGEQQELVQALTAGSIDVAMLFEHDLGSTIETTPLMPPQQPYALLPADHRFAQQAKVSLADLVLEPMILLDVLPSRTYFVSIFEERGLTPNIVFSSPSIEMVRGMVGRGFGFSILVTKPFSEYTYDGQKVVCIPLVETVTGSGLSAVWLRRAPLTKPVQLFVDYCREELARLLG
>NZ_CP045767.1|WP_014718152.1|1751795_1752941_-|acetylornithine-deacetylase
MSRSRDLLETLVGFDTTSRESNLQLIEYVRDYLAGLGVTSELVYNAQRSKANLFASIGPVELPGIVLSGHTDVVPVDGQPWSLPPFTLTERDGKLFGRGTADMKGYIACVLALVPALVKAPLRLPVHIALSYDEEVGCLGVRSLLAVLEQRPVKPMLCIIGEPTELKPVLGHKGKLAMRCDVQGQACHSAYAPSGVNAIEHAAELIGELGRIGQRLRARQDPRFDPPFSTVQTGMINGGKALNIVPADCRFDFEVRALPSMDPGEVAEELQAYARQQVLPRMQAVSKQSSIRFTELSAYPGLVTDERSQAAQLIATFCDSQAFGTVAFGTEGGLFDAVGIPTVVCGPGSMDQGHKPDEFVSLEQLDGCDAMLQRLLGFIST
>NZ_CP045767.1|WP_032903521.1|1752937_1753615_-|DUF1028-domain-containing-protein
MTFSIVGRCAETGQLGIAISSSSIAVGARCPWLRPGVGAVSTQNITLPALGPDVLDGLEQGLAPADAVDKALTRHGYSQYRQLTAIDHLGRSVHFSGSQTLGTHHAVSGEQCVAAGNMLAAPEVITAMVTAFEQGEGQLADRLLAAMHAAIAAGGEAGPVHSAALVVVGELTWPIINLRVDWADEAPIGELQKLWDAYRPQVQDYIDRALAPDRSPGYGVAGDDR
>NZ_CP045767.1|WP_014718154.1|1753626_1754037_-|RidA-family-protein
MPTHTRIRMFNTKETYPNQSLDNDLCQAVRAGNTVYVRGQVGTDFDGNLVGLGDPRAQAEQAMKNVKQLLEEAGSDLSHIVKTTTYLIDPRYREPVYQEVGKWLKGVFPISTGLVVSALGQPQWLMEIDVIAVIPE
>NZ_CP045767.1|WP_032903520.1|1754060_1755350_-|SidA/IucD/PvdA-family-monooxygenase
MTVAITKIDTLVVGAGQAGVAMSEHLSKQGVPHLVLERSRIAERWRTGRWDSLVANGPAWHDRFPGLHFDDVPADGFAPKERVADYFEAYARKFNAPIRTGVDVTSVVRNEGRPGFTVHTSEGVIEANRVVAATGPFQKPVIPAIAPKDTALHQIHSADYRNPGQLPAGAVLVVGAGSSGVQIADELQRSGRQVYLSVGAHDRPPRAYRNRDFCWWLGVLGEWDQAAMKPGREHVTIAVSGAHGGKTIDFRELAQQGMTLVGLTHAFDGTVATFQPNLVENLARGDENYLALLDAADAYIERNGLDLPLEPEARRVFPDAECIKQPILTLDLAEAGITSIIWATGFAVDYSWLQVDAFDAAGKPQHQRGVSSEAGIYFLGLPWQSRRGSSFIWGVWHDAKYVADHIAIQRQYLEYREAAPVARQSPVSA
>NZ_CP045767.1|WP_153649610.1|1755570_1756161_+|antibiotic-biosynthesis-monooxygenase
MESTANTRPDEVVTLVVKHRVKPGFEVEYEAWLRRIVRIAGERPGHLGVDVVRSQQNGMALFTCVLRYSSTNALELWLGSPQRQALIDEAAPMLADGDQTEIGAANEFWFTPQAEGGAKPPRWKQTVVSLFVILPQTLLLPFIWGPILRLHPFLSNYVVSTFLVTLTIVLLVVYLLMPAATRLFAPWLEASVKETL
>NZ_CP045767.1|WP_014718157.1|1756157_1757996_+|amidohydrolase
MNADLILFNGQFHTVDRENPRATAVAIHQGRFVAVGTDGEAMALRGSGTQVIDLKGRTVIPGLNDSHLHLIRGGLNYNLELRWEGVPSLADALRMLKDQADRTPTPQWVRVVGGWNEFQFAEKRMPTLEELNQAAPDTPVFVLHLYDRALLNRAALRVAGYTKDTPNPPGGEIVRDSNGNPTGMLVARPNAMILYSTLAKGPKLPLEYQVNSTRQFMRELNRLGLTSAIDAGGGFQNYPDDYAVIEQLAKDQQLTVRIAYNLFTQKPKEELSDFKHWTGSVTLHQGDDYLRHNGAGEMLVFSAADFEDFLEPRPDLPLTMEQELEPVVRHLVEQRWPFRLHATYDESISRMLDVFEKVNRDIPFNGLPWFFDHAETITPKNIERVRALGGGIAIQDRMAFQGEYFVERYGAKAAEATPPIKRMLAEGVPVGAGTDATRVSSYNPWTSLYWMVSGRTVGGLELHAEGLPRLTALELFTHGSAWFSSEQGKKGQIKVGQLADVAALSADFFSVEEEAIKWIESVLTVVGGKVVYGAGDFEDFAPPRVPVLPDWSPVVKVPGHWRPTSPMQAQVHQCSGPCGVHAHSHEKARLSSVPVSDFQGFWGAFGCSCFAF
>NZ_CP045767.1|WP_003191905.1|1758025_1758643_+|hydrolase
MTYKRLNKDDAVVLLVDHQTGLISLVQDFSPNEFKNNVLALADVAKFFNLPTILTTSFESGPNGPLVPELKELFPDAPYIPRPGQINAWDNEDFVKAVKATGRKQIIIAGVVTDVCVAFPTLCALDEGFEVFVVTDASGTFNETVQQAAWARMTAAGAQLVNWFSVACELQVDWRNDMEGLANLLSPRIPNYRNLMNSYSAFAAK
>NZ_CP045767.1|WP_032903519.1|1758840_1759722_+|LysR-family-transcriptional-regulator
MNPFEDMRLFCQVMESGSFTAAAEQLGLSKQFVSRRLIQLEDRLGVRLLNRSTRRLDVTPLGQSYYESALRLLGEVEQVEQGIAGQNSEPRGTIRLSAPLSFAMAHLGCLLPLFLRQHPQVCVEVDLSDRPVDLIGEGYDLVLRIGTLEDSTLIARRIAAIERVYCASPDYLALRGTPLKPEDLTTHDCLPYGHGRQVQWRFKGKVQALSVSGRMRVNNGDLLRDTAIAGLGVTYLPTFIVSEALKDGRLVKVLEDFAPEALTLSAVYPQHRQSSRPVQALVEFLRERLASGC

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Crispr_ID: NZ_CP045767_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045767_7

1775742-1775842

Orphan

Consensus_repeat	Method
CCAATGTGGGAGCTGGCTTGCCTGCGAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045767_7

>merge|NZ_CP045767|7|1775742-1775842|CRISPRCasFinder
CCAATGTGGGAGCTGGCTTGCCTGCGATGACGGCCTGACAGCCGACATTTACCTACCAGACACCCCCGCAATCCAACTGTGGGAGCTGGCTTGCCTGCGAT

>NZ_CP045767|7|7|1775742-1775842|CRISPRCasFinder
CCAATGTGGGAGCTGGCTTGCCTGCGAT	GACGGCCTGACAGCCGACATTTACCTACCAGACACCCCCGCAATC
CAACTGTGGGAGCTGGCTTGCCTGCGAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045767.1\|WP_014718165.1\|1767572_1768019_+\|protein-TolR	unknown	unknown	gnl\|CDD\|274306
NZ_CP045767.1\|WP_032901906.1\|1774792_1775698_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_CP045767.1\|WP_153649965.1\|1775932_1777225_-\|IS4-family-transposase	unknown	unknown	gnl\|CDD\|376573
NZ_CP045767.1\|WP_020302077.1\|1779794_1780955_+\|alpha-hydroxy-acid-oxidizing-protein	unknown	unknown	gnl\|CDD\|376451
NZ_CP045767.1\|WP_153649611.1\|1777442_1777736_+\|transposase	unknown	unknown	gnl\|CDD\|366690
NZ_CP045767.1\|WP_014718160.1\|1760747_1761662_-\|GGDEF-domain-containing-protein	unknown	unknown	gnl\|CDD\|143635
NZ_CP045767.1\|WP_032903886.1\|1781147_1782074_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223999
NZ_CP045767.1\|WP_020302881.1\|1772387_1773971_-\|transferase	unknown	unknown	gnl\|CDD\|238793
NZ_CP045767.1\|WP_014718164.1\|1766864_1767557_+\|protein-TolQ	unknown	unknown	gnl\|CDD\|131843
NZ_CP045767.1\|WP_032903516.1\|1764951_1766817_+\|phytase	unknown	unknown	gnl\|CDD\|226698
NZ_CP045767.1\|WP_032903517.1\|1762405_1764916_+\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|273804
NZ_CP045767.1\|WP_020302880.1\|1771330_1772305_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270276
NZ_CP045767.1\|WP_020302080.1\|1783119_1783707_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|184971
NZ_CP045767.1\|WP_102666992.1\|1773967_1774585_-\|cysteine-dioxygenase	unknown	unknown	gnl\|CDD\|227840
NZ_CP045767.1\|WP_003191873.1\|1784919_1785534_+\|translesion-DNA-synthesis-associated-protein-ImuA	unknown	unknown	gnl\|CDD\|380271
NZ_CP045767.1\|WP_020302079.1\|1782227_1783091_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|212491
NZ_CP045767.1\|WP_020301598.1\|1784302_1784920_+\|repressor-LexA	unknown	unknown	gnl\|CDD\|171489
NZ_CP045767.1\|WP_138726256.1\|1777711_1778596_+\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP045767.1\|WP_032903515.1\|1768015_1768771_+\|energy-transducer-TonB	unknown	unknown	gnl\|CDD\|367555
NZ_CP045767.1\|WP_032903888.1\|1778888_1779674_-\|DeoR/GlpR-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224268

Protein	Function_ID	Function_description	E-value
NZ_CP045767.1\|WP_014718165.1\|1767572_1768019_+\|protein-TolR	gnl\|CDD\|274306	TIGR02801, Protein_TolR, TolR protein. The model describes the inner membrane protein TolR, part of the TolR/TolQ complex that transduces energy from the proton-motive force, through TolA, to an outer membrane complex made up of TolB and Pal (peptidoglycan-associated lipoprotein). The complex is required to maintain outer membrane integrity, and defects may cause a defect in the import of some organic compounds in addition to the resulting morphologic. While several gene pairs homologous to talR and tolQ may be found in a single genome, but the scope of this model is set to favor finding only bone fide TolR, supported by operon structure as well as by score. [Transport and binding proteins, Other, Cellular processes, Pathogenesis].	7.92365e-48
NZ_CP045767.1\|WP_032901906.1\|1774792_1775698_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	2.1116e-45
NZ_CP045767.1\|WP_153649965.1\|1775932_1777225_-\|IS4-family-transposase	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	4.24476e-07
NZ_CP045767.1\|WP_020302077.1\|1779794_1780955_+\|alpha-hydroxy-acid-oxidizing-protein	gnl\|CDD\|376451	pfam01070, FMN_dh, FMN-dependent dehydrogenase.	5.78239e-175
NZ_CP045767.1\|WP_153649611.1\|1777442_1777736_+\|transposase	gnl\|CDD\|366690	pfam01527, HTH_Tnp_1, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family consists of various E. coli insertion elements and other bacterial transposases some of which are members of the IS3 family.	2.86556e-07
NZ_CP045767.1\|WP_014718160.1\|1760747_1761662_-\|GGDEF-domain-containing-protein	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	2.4758e-33
NZ_CP045767.1\|WP_032903886.1\|1781147_1782074_-\|alpha/beta-hydrolase	gnl\|CDD\|223999	COG1073, COG1073, Hydrolases of the alpha/beta superfamily [General function prediction only].	1.21371e-19
NZ_CP045767.1\|WP_020302881.1\|1772387_1773971_-\|transferase	gnl\|CDD\|238793	cd01535, 4RHOD_Repeat_4, Member of the Rhodanese Homology Domain superfamily, repeat 4. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 4th repeat which, in general, contains the putative catalytic Cys residue.	3.36374e-72
NZ_CP045767.1\|WP_014718164.1\|1766864_1767557_+\|protein-TolQ	gnl\|CDD\|131843	TIGR02796, Protein_TolQ, TolQ protein. TolQ is one of the essential components of the Tol-Pal system. Together with TolR, it harnesses protonmotive force to energize TolA, which spans the periplasm to reach the complex of TolB and Pal at the outer member. The tol-pal system proves to be important for maintaining outer membrane integrity. Gene pairs similar to the TolQ and TolR gene pair often number several per genome, but this model describes specificially TolQ per se, as found in tol-pal operons. A close homolog, excluded from this model, is ExbB of the ExbB/ExbD/TonB protein complex, which powers transport of siderophores and vitamin B12 across the bacterial outer membrane. The Tol-Pal system is exploited by colicin and filamentous phage DNA to enter the cell. It is also implicated in pathogenesis in several bacterial species [Transport and binding proteins, Other, Cellular processes, Pathogenesis].	3.17357e-81
NZ_CP045767.1\|WP_032903516.1\|1764951_1766817_+\|phytase	gnl\|CDD\|226698	COG4247, Phy, 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase) [Lipid metabolism].	2.33541e-94
NZ_CP045767.1\|WP_032903517.1\|1762405_1764916_+\|TonB-dependent-receptor	gnl\|CDD\|273804	TIGR01782, TonB-dependent_receptor, TonB-dependent receptor. This model represents a family of TonB-dependent outer-membrane receptors which are found mainly in Xanthomonas and Caulobacter. These appear to represent the expansion of a paralogous family in that the 22 X. axonopodis (21 in X. campestris) and 18 C. crescentus sequences are more closely related to each other than any of the many TonB-dependent receptors found in other species. In fact, the Crescentus and Xanthomonas sequences are inseparable on a phylogenetic tree using a PAM-weighted neighbor-joining method, indicating that one of the two genuses may have acquired this set of receptors from the other. The mechanism by which this family is shared between Xanthomonas, a gamma proteobacterial plant pathogen and Caulobacter, an alpha proteobacterial aquatic organism is unclear. [Transport and binding proteins, Porins].	0
NZ_CP045767.1\|WP_020302880.1\|1771330_1772305_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|270276	cd13558, PBP2_SsuA_like_2, Putative substrate binding domain of sulfonate binding protein, the type 2 periplasmic binding protein fold. This subfamily includes the periplasmic component of putative ABC-type sulfonate transport system similar to SsuA. These domains are found in eubacterial SsuA proteins that serve as initial receptors in the ABC transport of bicarbonate, nitrate, taurine, or a wide range of aliphatic sulfonates, while other closest homologs are involved in thiamine (vitamin B1) biosynthetic pathway and desulfurization (DszB). After binding the ligand, SsuA interacts with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The SsuA proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	2.44181e-95
NZ_CP045767.1\|WP_020302080.1\|1783119_1783707_+\|hypothetical-protein	gnl\|CDD\|184971	PRK15009, PRK15009, GDP-mannose pyrophosphatase NudK; Provisional.	9.61174e-74
NZ_CP045767.1\|WP_102666992.1\|1773967_1774585_-\|cysteine-dioxygenase	gnl\|CDD\|227840	COG5553, COG5553, Predicted metal-dependent enzyme of the double-stranded beta helix superfamily [General function prediction only].	1.30409e-59
NZ_CP045767.1\|WP_003191873.1\|1784919_1785534_+\|translesion-DNA-synthesis-associated-protein-ImuA	gnl\|CDD\|380271	NF033429, ImuA_translesion, translesion DNA synthesis-associated protein ImuA. A three-gene cassette encoding ImuA, ImuB, and ImuC (""inducible mutagenesis"") is induced by DNA damage, is capable of DNA synthesis across DNA damage lesions, and consequently is associated with mutagenesis. This family, ImuA (previously misnamed SulA in Pseudomonas putida) shows some homology to SulA itself and to RecA. ImuB resembles Y-family polymerases but may be catalytically inactive. ImuC is a C-family polymerase, and catalytically active.	6.17104e-80
NZ_CP045767.1\|WP_020302079.1\|1782227_1783091_+\|SDR-family-oxidoreductase	gnl\|CDD\|212491	cd05233, SDR_c, classical (c) SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	1.13325e-46
NZ_CP045767.1\|WP_020301598.1\|1784302_1784920_+\|repressor-LexA	gnl\|CDD\|171489	PRK12423, PRK12423, LexA repressor; Provisional.	5.3144e-130
NZ_CP045767.1\|WP_138726256.1\|1777711_1778596_+\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	2.25352e-55
NZ_CP045767.1\|WP_032903515.1\|1768015_1768771_+\|energy-transducer-TonB	gnl\|CDD\|367555	pfam03544, TonB_C, Gram-negative bacterial TonB protein C-terminal. The TonB_C domain is the well-characterized C-terminal region of the TonB receptor molecule. This protein is bound to an inner membrane-bound protein ExbB via a globular domain and has a flexible middle region that is likely to help in positioning the C-terminal domain into the iron-transporter barrel in the outer membrane. TonB_C interacts with the N-terminal TonB box of the outer membrane transporter that binds the Fe3+-siderophore complex. The barrel of the transporter, consisting of 22 beta-sheets and an inside plug, binds the iron complex in the barrel entrance.	6.78069e-14
NZ_CP045767.1\|WP_032903888.1\|1778888_1779674_-\|DeoR/GlpR-transcriptional-regulator	gnl\|CDD\|224268	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism].	4.21087e-75

>NZ_CP045767.1|WP_032901906.1|1774792_1775698_+|LysR-family-transcriptional-regulator
MKIDDIDAFVEVIRCQSISHAAASLQLTQPAITRRVQNFEQALGVELFDRNTKPLKPTLIGTRVYEQCRLILREMDALRELVATDAPPTGVLRLGVPQTIGDVVLLDALKHLRSEYADLRAQVATGWGSQLVGKIERGELDAAVALFPAGKIFPDNLIGESIGKMELVVVCAKAQLPKKPCKLADVYQSGWILNPDGCGFRAGLQRTLSDQGLALRVNLETFGTELQLGLVADGLGLGLVPRPLLERSAHREQLAAMPLKDFKPVMDLWLIYPHFLGNLQGPVDAFGQWVADALHKIRSAA
>NZ_CP045767.1|WP_102666992.1|1773967_1774585_-|cysteine-dioxygenase
MVMTQARHPERLRAFIGALAELIDGNPREGDLLHRGGKLLAQLVSHDDWLPDEFAQPDPERYQQFLLHADSRQRFSVVSFVWGPGQRTPIHDHRVWGLIGMLRGAEVSQGFARAPGGSLVAQGEPVQLLPGQVEAVSPKVGDIHQVSNAHGDQVSISIHVYGANIGAVRRAVYQPDGSEKLFISGYSNAYLPNIWDLSKEKSPAL
>NZ_CP045767.1|WP_020302881.1|1772387_1773971_-|transferase
MTTLSTRSFAQIRQALLAREEVALIDVREEAPFAEAHPLFAANIPLSKLELEVYARIPRRDTQVTLYDNGEGLAQRAAEHLVALGYTQVSLLEDGLDGWRRAGGELFIDVNVPSKAFGELVENQRHTPSLAAEEVQALLDSQADVVVLDARRFDEYQTMSIPTGISVPGAELVLRARELAPDPATRIIVNCAGRTRSIIGTQSLINAGLPNPVAALRNGTIGWTLAGQTLAHGQARRFAPTSENHRQLAAQKARGVADKAGVKRATLNDLHRWQQDATRTTYLFDVRTVEEFEAGHLPGARATPGGQLVQETDHVASVRGARLVLVDDDGVRANMSASWLAQLGWQVYVLDDLQAEHFSERGAWVAPVPPPPQAELISPHTLADWLGHGDTQVLDFTASANYVKRHIPGAWWVLRAQLPEALSKVPSAQRYVLTCGSSQLARLAVPEVEALTGKPVFLLQDGTAGWIQAQLPLESGESHLASPRIDRYRRPYEGTDNPREAMQAYLDWEFGLVEQLARDGTHGFYVI
>NZ_CP045767.1|WP_020302880.1|1771330_1772305_-|ABC-transporter-substrate-binding-protein
MLYAIPFKRLLLGAALALGLLSTVQAGDLQPLRVANQKSTIKALLEASGESQNVPYEIKWSEFPSASPLGEALNAGAVDVGALGDAPYVFALGAGASIKVISIIHAEGRNTTALLVPKDSPIKTAADLKGKKIVTGRGSIGHYLAIKALNDAGLTTQDVQFIFLLPAESRLVLDNGTADAWATWDPYTTVVTSQSNARVLVSGKHLLSNHLYFAATGQAIADKRVQLDDFVARIDRAYAWANTHPEQYAAAQAKITGLPLAVHIEVAKDTHLSPVTIDDTVIHGLQATADTYVKEGLLSKHIDVSQGFDSSFNAKRIPLEQASR
>NZ_CP045767.1|WP_032903515.1|1768015_1768771_+|energy-transducer-TonB
MTVMIMHSPALALAPDSDGFWRKSLAASLAVALHGAVAVALMLGWSTERPGGPAPRVMHTQWVVLPAPAPAPTPEPVAVALPEPVAIPVPTKPTVDPQVQAQKLEKAALARKRVEEKKLEQQQQRMATEQRNQALEQQRLSQARAASEKARAAVPVPTPAFDSRQYQPLSKAAPDYPERALDKNIEGDCSVEYTVNTQGHVENPKVLDGCHPLFIRPSLAAANTFRYQPRIVDGKAVAVPAVRNTFHYRIK
>NZ_CP045767.1|WP_014718165.1|1767572_1768019_+|protein-TolR
MLIRPQRKHGPKAEMNVVPYIDVMLVLLVIFMVTAPMLTQGVKIELPKVAAEALATDTRQQILTLSVKADGGYYWNLGGELDTRQQTDSAVTLEEMSAKVMQVVAARSDTQVYIRADDNAGYGRVVAAMAVLQKGGISNLGLVTEAPQ
>NZ_CP045767.1|WP_014718164.1|1766864_1767557_+|protein-TolQ
MHATMEHMTIWSLISDASLLVKAVMVTLLLASLLSWYLIIQRSSVLRGLERQLDGFLARFRVASDLQPLYRETVQAGEGGVAPIFIAGMQEYQHLHHHDPAVLEGVERALQVAITEQELELEKGLQFLATVGSVSPYIGLFGTVWGIMNSFLGLSQVQQATLSTVAPGIAEALIATAIGLFAAIPAVVAYNRFAARSQTLLTRYYAFGNELQVHLHRTLRGTSNNLAVAA
>NZ_CP045767.1|WP_032903516.1|1764951_1766817_+|phytase
MRISKLCLLVVLVSSANAFATDLPLTPWAPSLNAQAVAFLPGGTQRVAASARDGLLLLDDNGVELARFKGRFSSLDTRTAGTQSLIASLDNDRQQALLIGLDGAGKTWGTPLYLPPRDFAVNSLCLYRDATANLFVFLVGEEGKGEQWLVGNGATLLAQAQRVRSLPLPPSAQYCQVDDATERLVVNEQNVGWWAYPAHPEAEVKRTPVALFDDPQREAGVMALVPGGMLALDPKTAQLHLFQQVGERWVEQPSLALPGLKEPEQLAIQGRQVLVRDDNSGQLYQGRLDWQATPVPVAPILAQVAALRQTEPVGRQGDAADDPAIWIHPETPAKSRVLGTNKKQGLLAYDLDGKLLQELAVGRLNNVDLRPGFKLGTHTVDLAVASNRDRNSLSLFSIDRQSGELREAGEVSTPLKDIYGICLYQPASGELYAFANDKDGTFLQYRLSAPAGRVQGELVRQFKVDSQPEGCVADDQRQRLFIGEEDVGVWAMDARADQPAMLTSVINVGPQLHADVEGLALYQSPARDYLVVSSQGNDSYLVLDAEPPFAVRGALRVGLNAAAGIDGASETDGLEVTAVNLGGPWSQGMLVVQDGRKRMPEQAQNFKFVPWAEVSRALKLP
>NZ_CP045767.1|WP_032903517.1|1762405_1764916_+|TonB-dependent-receptor
MYKRTGLVSFTLTALALAIACERLNAAEAATEHVDVVGQAAAIDSALKEQRSSDSIKSVVHADGVAQLPDENVAEAVQRLPGISVERDQGEGRFVSVRGLGPDLNSVTINGTLVPSPESERRAVALDVLPSELVQSLSVIKTLTPDMDANSLGGTVDVKSLSAFDHKGLFYTGSTEASYDKNTHQTSPKFSGAASNRFSLGDGIDNFGVAAALSWQKRDFGSDNVETGGAWDFTNGARLNEFEQRDYDISRERAGGGLNFDYKPDDLSSYYLRTLYSRYKDTETRNAASLEFADPQAPGELGEAEGKRKLKNREETQQIQSYVLGGERLLGLWTLSGQAGYSRSSEDSPGHIAGATFDGGDFADSGFYDKAKPRPIVGSGFYDPANFSLDKVDWEKQHTQDTEKNLRLDLARDYDLRGYASQFKFGGKVSRRHKDNDLEAWVYKDLDEEGLSDEQLNLTQFQKGSVDYRLGRFGPGISASNIRQLIGGLNRDDFYDPTESTVNDFTIREDINAGYLMNTVDIDDWRFIAGMRYEGTEFEAKGTGATDGQFSATETKRRYHHWLPGLHARYQIDKNTQVRAAWTKSVVRPTFGQLAPGFVIDDDEATFGNPDLKPLESSNLDLGIEHFMGRAGTVSAFVFYKDIQNFVYNTDVAGTGAWANFAEAHTFANGDSAKLYGLELAYSQKFDWLPAPWNGLMIGANSTFSRSSADIEGFDSASGRNRKRNISLPNQSDTVGNLMLGWEDDTLSLRLSANYKSAYLYELASINDKAHDLHVDAQTFVDFSARYSLTKNLQVSFEAQNLTDESYFVYTGHRSYNGQYEEYGPTYKLGLTFTHF
>NZ_CP045767.1|WP_014718160.1|1760747_1761662_-|GGDEF-domain-containing-protein
MFSVLKPHRWKLALLLIAANLGLLLHLACGELKSVSEWVWLDIIGEGGSALLALIWLGLVLKSRPAGRVTQYLALGLSCIFFSWWIDSLDEFIRLPDSVSWDHWLESGPMPVGMILLTIGIYHWHHEQLAISAQMEKRERLFREHRLFDKLTPLAGADYLKRQLIDSLRDSQAQQQPLSLLALDLDNFATINQVYGHAEGDAVLQAVSHVLLLNLRRQDLLCRLAGDRFVVLLPNTGERQAQGLALELQHAVQSLAHKTRQQGERLQLAATTAVAMALQESPHELLTRLNMGLARAKQPLAKSA
>NZ_CP045767.1|WP_153649965.1|1775932_1777225_-|IS4-family-transposase
MAKLALQQAIAPEWIFEEHRQRQYSRELLFSTIIKLMSLVSLGLRPSLHAAARQLEDLPVSLAALYDKISRTEPALLRALITGCAQRLAPTIRELGCTAMLPGWQVRVVDGNHLASTEKRLGALRNERGAARPGFSVVAYDPDLDQVVDLQACEDAYASERVCVLPLLANAEPGQVWLADRLYCTLPVMEACEQVQTCFVIRQQAKHPRLIQEGEWQEPVPVETGTVREQIIQVKGGYQCRRVELTLHSPTDSGDSSLMFWSNLPESVSAQQIAELYRRRWSIEGMFQRLEAILESEIETLGSPKAALLGFATAVLAYNVLAVLKRSVEQAHRDTQPEGWEASIYHLAVQVRSGYEGMQIALPSEHFPVIPLEKLAQHLLALARNIQPKQVAKSPRGPKVPKPKTWVKGTAVNAHVSTDRIIKAAKTKRP
>NZ_CP045767.1|WP_153649611.1|1777442_1777736_+|transposase
MYPSTRRNYTDEFKTQAVALAESVGRTEAARQLEMSVKTLDNWVNATRKGQPLSSPERKPITKEDSELARLRAEVAGLKMEREILKKAAVFFARESR
>NZ_CP045767.1|WP_138726256.1|1777711_1778596_+|IS3-family-transposase
MLRQRVQVRYAFVAAERTQYPVRMLCRVMEVSTSGFYDYTHRQPRPDPDAQIRIELRSVYAASRHTYGRPRLVAALRQKSYAVGHKRVSRLMQEEGIHGKSKRGFRPCTTDSNHYLPVANNVVARQFAIDNPTPTWVSDITYLPTREGWLYLAVVLSIQTRQILGYSLSDRMPDGLVESAFLNAWSACSGTSGAVFHSDQGRQYASSKFRLALAKKDFKQSMSRKGNCWDNAVAESFFATLKREEAFGVYPTKKQAQLSIASYVHGFYNSSRLHSALGYRSPNEYAKSLRQKTG
>NZ_CP045767.1|WP_032903888.1|1778888_1779674_-|DeoR/GlpR-transcriptional-regulator
MHNTHQAIDLPSLRKQKILLLLERDGKVTASELVEHFAVSQDTIRRDLGELAAAGLLQRVHGGALPRPKDTGKDFFTRVGETNEVKRHLARVAAERVEDGQIVLFDSGSTTLQIAQCLPHALHLTVVTPSPMIAIALADHPHIKVILAGGQLNPATLSTGGHEAVRLIQSVKADLLFTGVCALHPQVGITSLHFGEVAVKQALLDSASHVIAVTTSDKLGAVEPFVVAPCSRIHTLITEWDAPDVQAYEQLGLQVQQVDVQ
>NZ_CP045767.1|WP_020302077.1|1779794_1780955_+|alpha-hydroxy-acid-oxidizing-protein
MPLITTIEDLRKLAQKRVPRMFYDYADSGSWTESTYRANETDFARIKFRQRVARNIDERSIRASMIGQDMAMPVALAPTGLAGMQHADGEILTARAAAAFGLRYTLSTMSICSLEDIAEHVGQPFWFQLYVMRDRGFIEQLIERAKAAGVDALVLTLDLQILGQRHKDLINGLSAPPKLTLPNILNMMTKPRWVMGMLGTQRRGFGNIVGHVKGVADMSSLSSWTAQQFDPRLSWDDVAWIKRCWGGKLIIKGILDVEDARLAADCGADALVVSNHGGRQLDGAPSSISQLPAIVEAVGNRIEVWLDGGIRSGQDVLKAMALGAKGTMIGRPHLYGLGAMGEAGVTKALDIIARELDVSMALCGYKDIREVNREILLPGTFPGSTA
>NZ_CP045767.1|WP_032903886.1|1781147_1782074_-|alpha/beta-hydrolase
MSSASMPRRGLRWFVWLCMAVLIVGLPVGCAVLQHKERELVFRIEPGTAGWYTGLPKAVQEFELKPASFKAGQNIHGWWYPAANKDAPAILYLHGVRWNLTGQLFRIEQLHALGFSVLAIDYRGFGQSQGDLPSEATVYEDARIAWERFQTLQPDPGKRLIYGHSLGGAVAIDLAAELGKQVPLPVRGLVIESTFTSLADVATAVANTSLPVRWLLSQKFDSIDKIADIHMPLLVVHGLDDRYVPPRFSQQLFEAAQQPKHLLLVPGASHNNSMNLAGRSYGQALENLMRTKMPAQVVTHSTGRDNAS
>NZ_CP045767.1|WP_020302079.1|1782227_1783091_+|SDR-family-oxidoreductase
MDFTGKTAIVTGGARGLGLSYARALAQAGARVVISDIGADNVGTGTDASVVQQAAEALRAEGLMVAGHGGDLSTDEGCRQLISYTLETFGQLDILIHNAGWVGYQPITELDAAFLQRAMDINLYAPLWLCKHAWPHLLRSCAPRIILTTSDRAMYAQYEQTGLVAYSAGKMAQVGIMNALSHEGAEAGVLVNAISPVAKTRMWGVTQEPDELKPDWVTPGVLFLASRQCTDTGYILRASNGQFTATRFSENPGVDYPRNLARIKAGSAEEVAAAWSHIKQPPTQATT
>NZ_CP045767.1|WP_020302080.1|1783119_1783707_+|hypothetical-protein
MNDSPVRITAEETLSDNWYLLKKYSFDLRRRDGSWQAQTREVYDRGNGATILLYNREQRTVLLIRQFRMPTFVNDYPGYLIEAAAGLLDNASAEERIRLEAEEETGYRVGHVEKIYAAFMSPGSVTERIHFFIGEYQPGDRVGAGGGLEEEGEDIEVLELGFEQALAMVQSGEIVDGKTIMLLQHLELRMLKEGW
>NZ_CP045767.1|WP_020301598.1|1784302_1784920_+|repressor-LexA
MYSMTNLTPRRTAILTFIRERIAQQGQPPSLAEIAEAFGFASRSVARKHVVALTEAGFIEVNPNQARGIRLLNQPARPEWLDVPVLGRVAAGRPIGADAEVHSRLQLDPATFAKTPDYLLRVQGDSMIEDGILDGDLVGVRRTAEALNGQIVVARLDGDVTIKRFERHGDRVRLLPRNPAYQPIVVGPEQDLAIEGVFCGLVRQG
>NZ_CP045767.1|WP_003191873.1|1784919_1785534_+|translesion-DNA-synthesis-associated-protein-ImuA
MGAVVALDSLFNGGRVWKGRPAAPPASVHPTGLAALDAVLPSGGWPESALSEILMAQDGVGELQLVLPTLARLSALGERIVLVAPPYTPYPHAWQNAGVDVRQLSIIRAEERDALWAVEQCLRSGSCGAVLCWPRKADDRALRRLQVAAETGQTLAFAWRSLSEAINASPAALRLAVEARPAQVRVLKCRGGLAHPAPIALAGH

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Crispr_ID: NZ_CP045767_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045767_8

2822122-2822218

Orphan

Consensus_repeat	Method
TCGCAGGCAAGCCAGCTCCCACAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045767_8

>merge|NZ_CP045767|8|2822122-2822218|CRISPRCasFinder
TCGCAGGCAAGCCAGCTCCCACAGTTGGATCGTTGGGGTGTCGGGTAGATAGGCGTCGGCTGGCGGGCCGCCTTCGCAGGCAAGCCAGCGCCCACAG

>NZ_CP045767|8|8|2822122-2822218|CRISPRCasFinder
TCGCAGGCAAGCCAGCTCCCACAG	TTGGATCGTTGGGGTGTCGGGTAGATAGGCGTCGGCTGGCGGGCCGCCT
TCGCAGGCAAGCCAGCGCCCACAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045767.1\|WP_014718743.1\|2809429_2810752_-\|sigma-54-dependent-Fis-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225114
NZ_CP045767.1\|WP_032901665.1\|2829340_2831467_+\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|238657
NZ_CP045767.1\|WP_032901660.1\|2811424_2812249_-\|Cof-type-HAD-IIB-family-hydrolase	unknown	unknown	gnl\|CDD\|369792
NZ_CP045767.1\|WP_014718751.1\|2819906_2820398_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP045767.1\|WP_003190879.1\|2815342_2817085_+\|phosphoethanolamine-transferase-CptA	unknown	unknown	gnl\|CDD\|333729
NZ_CP045767.1\|WP_019817573.1\|2813765_2814749_-\|decarboxylating-6-phosphogluconate-dehydrogenase	unknown	unknown	gnl\|CDD\|236582
NZ_CP045767.1\|WP_032901662.1\|2822225_2823677_-\|efflux-transporter-outer-membrane-subunit	unknown	unknown	gnl\|CDD\|273830
NZ_CP045767.1\|WP_032872432.1\|2833608_2833884_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368629
NZ_CP045767.1\|WP_014718744.1\|2811096_2811357_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045767.1\|WP_032901666.1\|2832763_2833234_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045767.1\|WP_032901681.1\|2820563_2821670_-\|cell-division-protein-ZapE	unknown	unknown	gnl\|CDD\|224402
NZ_CP045767.1\|WP_032901664.1\|2826846_2828013_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|273776
NZ_CP045767.1\|WP_014718759.1\|2831624_2832632_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270359
NZ_CP045767.1\|WP_019817572.1\|2812245_2813769_-\|glucose-6-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|237233
NZ_CP045767.1\|WP_014718756.1\|2828327_2828765_-\|DUF3995-domain-containing-protein	unknown	unknown	gnl\|CDD\|372505
NZ_CP045767.1\|WP_032901661.1\|2817213_2819451_+\|TonB-dependent-siderophore-receptor	unknown	unknown	gnl\|CDD\|227114
NZ_CP045767.1\|WP_014718757.1\|2828858_2829248_+\|DUF2946-domain-containing-protein	unknown	unknown	gnl\|CDD\|371400
NZ_CP045767.1\|WP_014718750.1\|2819592_2819805_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045767.1\|WP_014718762.1\|2833994_2834225_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045767.1\|WP_032901663.1\|2823673_2826850_-\|efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223911

Protein	Function_ID	Function_description	E-value
NZ_CP045767.1\|WP_014718743.1\|2809429_2810752_-\|sigma-54-dependent-Fis-family-transcriptional-regulator	gnl\|CDD\|225114	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms].	1.58635e-163
NZ_CP045767.1\|WP_032901660.1\|2811424_2812249_-\|Cof-type-HAD-IIB-family-hydrolase	gnl\|CDD\|369792	pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase. This family contains haloacid dehalogenase-like hydrolase enzymes.	3.24787e-70
NZ_CP045767.1\|WP_014718751.1\|2819906_2820398_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	2.79332e-16
NZ_CP045767.1\|WP_003190879.1\|2815342_2817085_+\|phosphoethanolamine-transferase-CptA	gnl\|CDD\|333729	NF012179, CptA, phosphoethanolamine transferase CptA.	0
NZ_CP045767.1\|WP_019817573.1\|2813765_2814749_-\|decarboxylating-6-phosphogluconate-dehydrogenase	gnl\|CDD\|236582	PRK09599, PRK09599, NADP-dependent phosphogluconate dehydrogenase.	0
NZ_CP045767.1\|WP_032901662.1\|2822225_2823677_-\|efflux-transporter-outer-membrane-subunit	gnl\|CDD\|273830	TIGR01845, Outer_membrane_protein_OprM, efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family. Members of this model comprise a subfamily of the Outer Membrane Factor (TCDB 1.B.17) porins. OMF proteins operate in conjunction with a primary transporter of the RND, MFS, ABC, or PET systems, and a MFP (membrane fusion protein) to tranport substrates across membranes. The complex thus formed allows transport (export) of various solutes (heavy metal cations; drugs, oligosaccharides, proteins, etc.) across the two envelopes of the Gram-negative bacterial cell envelope in a single energy-coupled step. Current data suggest that the OMF (and not the MFP) is largely responsible for the formation of both the trans-outer membrane and trans-periplasmic channels. The roles played by the MFP have yet to be determined. [Cellular processes, Detoxification, Transport and binding proteins, Porins].	1.89312e-72
NZ_CP045767.1\|WP_032901665.1\|2829340_2831467_+\|TonB-dependent-receptor	gnl\|CDD\|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	2.83441e-71
NZ_CP045767.1\|WP_032901681.1\|2820563_2821670_-\|cell-division-protein-ZapE	gnl\|CDD\|224402	COG1485, COG1485, Predicted ATPase [General function prediction only].	2.9364e-139
NZ_CP045767.1\|WP_032901664.1\|2826846_2828013_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	8.02793e-79
NZ_CP045767.1\|WP_014718759.1\|2831624_2832632_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|270359	cd13641, PBP2_HisX_like, Substrate-binding domain of ABC-type histidine transporter involves in betaine and proline uptake; the type 2 periplasmic-binding protein fold. This subfamily is part of a high affinity multicomponent binding-protein-dependent transport system specific to certain quaternary ammonium compounds for osmoregulation. The periplasmic substrate-binding domain, which is often fused to the permease component of the ATP-binding cassette transporter complex, is involved in uptake of osmoprotectants (also termed compatible solutes) such as glycine betaine, proline betaine, choline, and carnitine. Many microorganisms accumulate these compatible solutes in response to high osmolarity to offset the loss of cell water. This domain belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	9.2145e-115
NZ_CP045767.1\|WP_019817572.1\|2812245_2813769_-\|glucose-6-phosphate-dehydrogenase	gnl\|CDD\|237233	PRK12853, PRK12853, glucose-6-phosphate dehydrogenase.	0
NZ_CP045767.1\|WP_014718756.1\|2828327_2828765_-\|DUF3995-domain-containing-protein	gnl\|CDD\|372505	pfam13160, DUF3995, Protein of unknown function (DUF3995). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 138 and 149 amino acids in length. There are two completely conserved residues (W and P) that may be functionally important.	7.97696e-19
NZ_CP045767.1\|WP_032901661.1\|2817213_2819451_+\|TonB-dependent-siderophore-receptor	gnl\|CDD\|227114	COG4773, FhuE, Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism].	0
NZ_CP045767.1\|WP_014718757.1\|2828858_2829248_+\|DUF2946-domain-containing-protein	gnl\|CDD\|371400	pfam11162, DUF2946, Protein of unknown function (DUF2946). This family of proteins has no known function.	2.36346e-06
NZ_CP045767.1\|WP_032872432.1\|2833608_2833884_+\|hypothetical-protein	gnl\|CDD\|368629	pfam05826, Phospholip_A2_2, Phospholipase A2. This family consists of several phospholipase A2 like proteins mostly from insects.	0.00338206
NZ_CP045767.1\|WP_032901663.1\|2823673_2826850_-\|efflux-RND-transporter-permease-subunit	gnl\|CDD\|223911	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms].	0

>NZ_CP045767.1|WP_032901681.1|2820563_2821670_-|cell-division-protein-ZapE
MTFDSPLAAYQHAIAQPGFVADDAQRRAVQALQACHEALHQGRSSIAGVYLWGPVGRGKTWLMDQFYQSLHVPARRQHFHHFMAWVHQRLFQLTGTQDPLQALARELSQAVRVLCFDELFVNDIGDAIILGRLFQVMFEEGVVMVCTSNQPPDQLYADGFNRERFLPGIDALKQHMQVVAVDGGEDHRLHPGVGMQRYWVNQPEALAAVFRQLSQGQAVNSVAVSVGHRTIMTVQASDTVLWCRYADLCEQPLAAMDFMLVCDRFHAILLGDVPNLSAQIRPGRIARGTEDGAERVVAGDRELPQLSVHDDSVRRFIALVDECYDRKVPLFIDAAVPLHSLYTEGYLEFPFRRTLSRLQEMQLQRFAT
>NZ_CP045767.1|WP_014718751.1|2819906_2820398_-|GNAT-family-N-acetyltransferase
MDTPDILVLQASYTNAVHADAIGLLLNSYAEDPMGGGHSLPADLLQQLPAELAKRPHAFSVLAFVGGEPAGLVNCFEGFSTFACRPLVNVHDVMVKEQFRGLGLSQKMLQKVEEIARQRGCCKITLEVLEGNALAQSAYRKFGFDDSVFDPAHGRMLFWHKPL
>NZ_CP045767.1|WP_014718750.1|2819592_2819805_+|hypothetical-protein
MKMSTLILASLMTLTSAAAFAEGGAERSKEFYNNFSFIQEKTHGKAEQQVASADGKSVKSETVDQAQPNS
>NZ_CP045767.1|WP_032901661.1|2817213_2819451_+|TonB-dependent-siderophore-receptor
MFAPFTRSMTFTLGLFSLALSPDSLADTDPDTAPAKALELGATTISADSLGATTEHTGAYTTGSMNTATRLNLSVKETPQSISVVTRQQMDDFNLNTLTDVLRQTTGVNVQHYDSDRVYYSARGYGISNFQVDGMLNTFGYMKTDADTIIYDRIEVVRGATGLTTGAGDPSATVNMVRKRPTAHWQAKTGISGASHDNYYSYVDVGGPLAFDGKLRGRSVLAYRDSQSFRDNYGLQRAVGYGILEGDLSDDTVLAVGFDYQDKQVQGTSWGTVPYWNSQGGKARLPRSTNMAAHWSSWPLTDKTTFATLDHRLGGDWHLKAAYTHRQSDTDGKVYYGGAGFPNPDRSGMTAWASHMRGTSRMEAIDLNLAGSYTLLGREHALMMGYGEAAQRDVSPFMRSDLPASYYPIQDWKHMGGIGKFTDQVTDLKGEHSKKQQKAGYLATRLSLTDRLHAVLGSRYGSWELESAEPKYDANDQLTASGKTSQTHNDMWTPYAGLLYDITPQYTVYASYTDIFKPQDYRDANKKYLEPVVGSNYEVGLKGSVLNERLNLAAAYFWSTQDNVAERDDSVPPNPVTGEEYYRSGGKGNKVNGFELEAAGEITPDWNLTAGYTYTHSVNGSDKRNNTSQPLNLVKISSAYRLPGAWRNLTVGGAVNWQSETYDFSNRPTGQRNGEGRPITTRAKITQQGYTVVNLMSRYQFDEQVSASVNVNNLFDKKYYERVGFYNGVYWGEPRSVTLALDWKL
>NZ_CP045767.1|WP_003190879.1|2815342_2817085_+|phosphoethanolamine-transferase-CptA
MAMFKRSTTTAKGFDWAGLGWLFLFFWYFSGITQLLIQLTGTSGFSGFRQAFFMSALWLAPMLLFPRRTRLLAALIGVVLWACSMASLGYFFIYQQEFSQSVIFIMFESNISEAGEYATQYFAWWIVLAFIAHTAFAIFLWTRLRPVYLPRGQSIVAAIAIVLAVVGYPLVKQIATSETMELAIDRFETRIEPAVPWQMIVAYRRYTEQLDNMQGMLTSASKIPPLNNLKDSMAGQPSTLVLVIGESTNRQRMSLYGYPRNTTPELDKLRDQLAVFDNVITPRPYTIEALQQVLTFADEENPDLYLKTPSIVSVMKQAGYKTFWITNQQTMTKRNTMLTTFSEQADEQVYLNNNRNQNARQYDGDVLAPFSKALADTAERKFIVVHLLGTHMSYQYRYPPTFDKFTDRQGVPAGVSDAQLPTYNSYDNAVLYNDFVVSSLIKDYAKTDPNGFLLYLSDHGEDVFDSAGHDTLGRNEGKPTAPMYTIPFMAYASPKWRESHDWSFAGDLQRPYSSSQLIHTWADMAGLSFDELDHSKSLVSDSFKPRPLLIGNPYETKQKALIDFSLIKPKKADGAEVVAK
>NZ_CP045767.1|WP_019817573.1|2813765_2814749_-|decarboxylating-6-phosphogluconate-dehydrogenase
MQLGIIGLGRMGGNIARRLMLNGHTTVVYDRNEAFVKALSEEGATGVADLKALVAGLQKPRAVWVMLPAGAPTEDTINALSELLEDGDVIIDGGNTNYKDDVRRGKALAEKGLHYVDVGTSGGVWGLERGYCMMIGGDTETVNRLDPIFKSLAPGLGNIPRTKDRSASADPRAEQGYIHAGPAGSGHFVKMIHNGIEYGMMQAFAEGFDILKTKNSENLPEDQRFDLNVGDIAEVWRRGSVVSSWLLDLTADALATDPKLDGYSGSVADSGEGRWTIEAAMEQAVPVPVLSTSLFARFRSRQQSTYGDKMLSAMRFGFGGHVETSKK
>NZ_CP045767.1|WP_019817572.1|2812245_2813769_-|glucose-6-phosphate-dehydrogenase
MTVNGKKPKAEPAPPTTLFLFGAHGDLVKRLLMPALYNLSRDGLLGDGLRIVGVDHNAISDADFAKKLEDFIRTEASSKVRGNAENALDPALWAQLAKGISYVEGDFLDDSTYADIASKIADSGTANAVFYLATAPRFFSEVVQRLGSAGLLNETDDGFRRVVIEKPFGSDLATAEALNACLLKVMSEKQIYRIDHYLGKETVQNILVSRFSNVLFEAFWNNHYIDHVQITAAETVGVETRGNFFEKTGTLRDMVPNHLFQLLAMVAMEPPAAFGADAVRGEKAKVVGAIRPWSLEDARANSVRGQYTAGEIAGKPLPGYREEANVAPDSSTETFVALKVMIDNWRWVGVPFYLRTGKRMSIRDTEIVICFKQAPYAQFRDTEVDELKPTYLKIQIQPNEGMWFDLLAKQPGPTLEMANIELGFDYKDFFEMQPSTGYETLIYDCMTGDQTLFQRADNIENGWRAVQPFLDAWKEDDGIQAYKAGEDGPAAADALLARDGRAWHSLG
>NZ_CP045767.1|WP_032901660.1|2811424_2812249_-|Cof-type-HAD-IIB-family-hydrolase
MSDATIHPIRFVLSDVDGTLLHPDHSLSQRTADAIRAMREAGVLFSLASGRPPKAMRHLIETFGIDVPVAGFNGGTLVNPDGSILVAHHLPAEAALITLALFSAEPDVEVWVFADGDWLRRDPPGPMVQREADGLGYGPVVVESFEPYLDRVDKIVAASNNTQLLVELEAQLQPKVQGLAQVSRSQPVYLDVTAMLANKGEALKTLAEHLGVPLAQTAAIGDGGNDPAMFHVAGLSIAMGQAEETVKRQANVVTGSNVEDGAAEAFERFILAAR
>NZ_CP045767.1|WP_014718744.1|2811096_2811357_+|hypothetical-protein
MNAPLRINEALLIADRAFQPFQCVAWHDGVGALSLSVIDRTNTRIGSKQLSCTAYTDPAQLENLLLQARAELDKDGHQLQSWAMPK
>NZ_CP045767.1|WP_014718743.1|2809429_2810752_-|sigma-54-dependent-Fis-family-transcriptional-regulator
MIATPAQRRLLVVDPCDDCHGLLPGLRTAGWEVDSCALEAVGERSCDVGLLRLQRDHLERPEAVKELIGRSGTEWIAVLSQDVLRLQNVGDFVCEWFFDFHTLPFDVSRVQVTLGRAFGMARLRGKGYAPVDEPHELLGESRPIRELRKLLSKLAPTESPVLIRGDSGTGKELVAKTLHRQSQRHAKPFVAINCGAIPEHLIQSELFGHEKGAFTGAHQRKIGRIEAANGGTLFLDEIGDLPMELQANLLRFLQEKHIERVGGSQPIPVDVRVLAATHVNLEAAVEKGAFREDLYYRLNVLQVVTAPLRERHGDVAMLANHFSRFYSQETGRRPRSFSEEALVAMGQHPWPGNVRELANRVRRGLVLAEGRQIEAADLGLQGQQAMSAPMATLEDYKHRAERQALCDVLNRHSDNLSVAARVLGISRPTFYRLLHKHQIR
>NZ_CP045767.1|WP_032901662.1|2822225_2823677_-|efflux-transporter-outer-membrane-subunit
MKQAYPAFLLSLTLLAGCGSVGPDYSAPVLPAAQRATSFGAPIAGLGPGEVEVQWWQVFDEPALSQLIQQALAANHDIGIAAARLDEAKALLRESRQGFLPSGGAALGYEHRQRSEVETPFGEQRSIETTRAAVDAAWEIDLFGRVRRSVEAAQAQAGSRQALLRSVQASVAATVAATWFELQGIEAEQAVVADISQSQRDSLGLVGQMVSVGAATEFDRLRAEALLRNVEAVAPDLERRRAKSTNALAVLLGQAPQGFKPPLARPGRETLNLRTLQVGDPAGLLARRADIAAAERTLAAATAQIGVETAGLYPDIQVQGSIGLLAGSLSALGDAGMQSNFIAPVIRWSLLDTGRVRARIAASEARTQAALIAYDQTVLRALQETDDAFQANRTAGNALGLRLLEAAANREAASFARERFAQGEGVYLDVLEAERADFTSRRALTAARTEQRLAVVGIYKALGGGWEICERAGQACKGATVLR
>NZ_CP045767.1|WP_032901663.1|2823673_2826850_-|efflux-RND-transporter-permease-subunit
MSFPRFFIDRPIFAIVLSVLMMIGGIVAFFHLPLSEYPAVTPPTVQVTASYPGANPQVIAETVAAPLEQVITGVEGMLYMTSQSATDGRMILTATFAQGTNADMAQIQVQNRVSRALPRLPEEVQRLGVVTQKTSPDILMVVHLLSPDQRYDPLYISNYAYLQVRDELSRLPGINDVLVWGAGEYSMRLWLDPDLIAARGLTAGDVIAAVREQNVQVAAGSVGQAPDSTAAFQVTVNTLGRLTDEEQFGDIIIRTGDNGQVTRLRDVARIEMGADAYALRSLLDGEPAVALQIIQSPGANALDVAQSVRETMQRLQTNFPEGLVSRIAYDPTVFVRASLESVAITLMEAILLVVIVVVVFLRNWRASLIPLMAVPVSIIGTFAVMHLMGFSLNTLSLFGLVLSIGIVVDDAIVVVENVERHIENGEEPMQAARRAMGEVTGPIIAITSVLAAVFIPTAFLSGLQGEFYRQFALTIAISTILSAVNSLTLSPALAGLLLRPRHAALVHDPRSLRGRATRLLEVLGRPFQRAPQAYGNTVRKVVGRRGVALLAYGGLLALTWFGFNAVPAGFVPMQDKYYLVGIAQLPNAASLERTDAVVRQMSKIALDEPGVESVVAFPGLSVNGFVNVPNAAVMFVMLDPFKERTSPDMAAVAIAGRLQAKFASIPDGFLGVFPPPPVPGLGVTGGFKLQVEDRGGVGLEALVQQTQVLMTKATESGQVAGLMTSLDVNAPQLNVDIDRTQVKSQGVRLADVFESLQVYLGSLYVNDFNRFGRTYKVTAQADADHRMQAEAIGRLQVRNAVGDMLPLSAFVTVTPSSGPDRVIHYNGYPSADISGGAMPGVSSGQAVALMERLAQEVLPEGVTYEWTDLTYQQKLAGSSALFIFPLCVLLAYLILAAQYNSWLLPLAVLLIVPMCLLSAILGVWLVEGDNNVFVQIGLVVLVGLAAKNAILIVEFARSLEAEGASPLEAVIHACQLRLRPILMTSLAFIAGVVPLVFASGAGAEMRHAMGVAVFAGMLGVTLFGLFLTPVFYVVMRSLALRVQRQGASPKVQLKESAS
>NZ_CP045767.1|WP_032901664.1|2826846_2828013_-|efflux-RND-transporter-periplasmic-adaptor-subunit
MYTKPVSLITGVLAVALTLGGCSDNSPPAAAAKPPGVPVAQVVARAVTPFVEYTGSLTAIDQVQLRPRVSGYLQSVSVPEGQFVAKGSPLFVIDPRMFQAAVNAAKARLREAEANALLAQAEHGRAEQLYAKKVVARDRLDTAVASLNAGRAQVEAARAALDTAQLDLSYTRVTAPISGRIDRALVTEGNYVTRGETALTTIVSIDPLHVYFDVDERTYLHSLAATRQHAGAKGEQAAKVMVAMLNDTTYARAGRVDFLANSADRKTGTVRVRAVVENPDGRLTPGLFAKVKLDTGAAQPRVLIADHSIGTDQGRRYVLVVGEGDKTEYRPVELGPVVDGLRIIEQGLQPGERIVVKGLVRPGMQVTPLAASIEGKPLEAPLAVGGVQ
>NZ_CP045767.1|WP_014718756.1|2828327_2828765_-|DUF3995-domain-containing-protein
MSFVIARWIVGVFTFISMVHLYWAAGGKLGSLAAIPQLPGEFASGPRPAFKPSALGTFLVAMGLVAIALLVCLRAGLYFSPVSHGALQWGISAIAVLMFARAIGDSELVGFFKKVGGSRFARLDTYFYSPLCLVLGAGLLVVAWT
>NZ_CP045767.1|WP_014718757.1|2828858_2829248_+|DUF2946-domain-containing-protein
MKLARADRSLIAWMLYCCVLFNVFACSIGHGQRVGMQLNGISGQFCTVDPRTQAPLPSNSTDENLPTLSKAFGCPLCSTGGMGPALNSHLNVAVLPQPHAPPAAVVLAADIPARFTWPAANPRAPPALA
>NZ_CP045767.1|WP_032901665.1|2829340_2831467_+|TonB-dependent-receptor
MKHLPLLAGLFGCLPVCASALELAPTTIDGEQSAEPGLALDQSSGMASRLGLSVRETPASVAIANRNDIERHGAKTFRDAANTLPGVNASAPPGFGGFVSYRGFTSSQITQMFNGINVATGLARPVDAWIYDRVELVGGPSSLINGAGSVGGSLNYVTKLANREEQAIEGQLSYGSYDTAGLAFGLNHALTEPGAEVQHYARLDVSRNTHHSYIDRDQRDAWSVAFSLLSDLTPNLSHTLALEYQDEHEDSPYWGTPVLNPKAGELKIDKHNRFNNYNVADGRYEQRTIWARSIIDYRINDSTTLKNTLYHLDSQRDYRNLETYQYNADNSAVNRSTAYQVRHQGEQNGNQFELRHDTSVFGLATTWSGGFEYKVNSTTNSPLNVPGKSTVDPNHYDPGHFYDIPGTQPGFVKDKTNQVTTKALFVENRLGLTDKLSLLTGLRYDAIDLDVTNHRTLTATNPRHFKRSWEPVTGRVGLTYQFIPSANVYVQYSTAVEQPNTTTQVFDVSTGKQWEIGSKFDYLQGRGSATVAAYKIERKDFAVTDPLDPTNSIPVGAQSSKGIELASSLHITPRLLAEGNFAWVDAQYDEFNEKTASGEVVSRKGNTPTNVPKRVGNLWLTYDFAEDWQGGVDARYVAQVYADNANTQTVPAYTLFGTFLRYKLDANTSVTGRVRNLTNEVYAEFAHVSPAYYLGSPRTFELAVHTKF
>NZ_CP045767.1|WP_014718759.1|2831624_2832632_-|ABC-transporter-substrate-binding-protein
MKGLKSLLAMGLTTLSLSLPVSAAQAPVHFADLNWESGSLITEVLRFIVEKGYDLPTDTLPGTTITLETALAKNDIQVIGEEWAGRSPVWVKAQAEGKVAGLGDIVKGATEGWWVPEYVVKGDPSKGLKPLAPDLKSVQDLARYKDVFKDPESPGKGRFLNSPIGWTSEVVNKQKLKAYGLDDSYVNFRSGSGAALDAEIASSIRRGKPVLFYYWSPTPLMGRYKLIQLEEPPFDADAWKTLTDADNPNPKPTRSLASKLSIGVSTPFQQEHPQIAQFFEKVEFPIEPLNKALATMSEHHTPPREVAQAFLKEHPQVWKAWLTEDVAQKIEASLQ
>NZ_CP045767.1|WP_032901666.1|2832763_2833234_-|hypothetical-protein
MAVSNLDMHALFVLGDLRAKLVKQFQSRFVYVTEQTPEGIYIAEIDTEAALVVDDKPRLELKVGDHFRAAVLPSREGGKFELRFRDIKLTVYGIGDYAFVSSNEGQGIVFKEGHSVMLVFAAHDQLQEGLTKTLKAVTGKAAKWRKGELVTFKASE
>NZ_CP045767.1|WP_032872432.1|2833608_2833884_+|hypothetical-protein
MQRRQHDATSFHTRSPCPDEQQYYCLLNLNGYSNSVLYQVVPAGKNFFHILEVPSGKIKGFRSDHIKACELAKSLEAKLYASGGGIVSSPG
>NZ_CP045767.1|WP_014718762.1|2833994_2834225_+|hypothetical-protein
MTEFDIGEFIIHGDAREVDGEFQAVIIMRAKPPLNKVTAHQVEKDRWFKTADAAAVAGKEAAKALKAAVDCGALNS

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Crispr_ID: NZ_CP045767_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045767_9

4222643-4222738

Orphan

Consensus_repeat	Method
GATCGTGGGGTGTCAGGTAGATAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045767_9

>merge|NZ_CP045767|9|4222643-4222738|CRISPRCasFinder
GATCGTGGGGTGTCAGGTAGATAGCCGTCGGCTGGCAAGCCGTCATCGCAGGCAAGCCAGCTCCCACAGTTGGATCGTGGGGTGTCAGGTAGATAG

>NZ_CP045767|9|9|4222643-4222738|CRISPRCasFinder
GATCGTGGGGTGTCAGGTAGATAG	CCGTCGGCTGGCAAGCCGTCATCGCAGGCAAGCCAGCTCCCACAGTTG
GATCGTGGGGTGTCAGGTAGATAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045767.1\|WP_032902734.1\|4215322_4216654_+\|DUF58-domain-containing-protein	unknown	unknown	gnl\|CDD\|224635
NZ_CP045767.1\|WP_014719746.1\|4226211_4227531_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340925
NZ_CP045767.1\|WP_014719745.1\|4224616_4225942_+\|sigma-54-dependent-Fis-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225114
NZ_CP045767.1\|WP_003193907.1\|4220658_4222182_+\|fumarate-hydratase	unknown	unknown	gnl\|CDD\|224862
NZ_CP045767.1\|WP_014719748.1\|4228604_4229237_+\|flavin-reductase-family-protein	unknown	unknown	gnl\|CDD\|224766
NZ_CP045767.1\|WP_019821226.1\|4216706_4217066_-\|PilZ-domain-containing-protein	unknown	unknown	gnl\|CDD\|377796
NZ_CP045767.1\|WP_032902728.1\|4232830_4233565_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP045767.1\|WP_003193903.1\|4217287_4217662_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045767.1\|WP_020302719.1\|4219500_4220442_-\|iron-sulfur-binding-ferredoxin-reductase	unknown	unknown	gnl\|CDD\|235575
NZ_CP045767.1\|WP_032902732.1\|4222856_4224623_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|226654
NZ_CP045767.1\|WP_003193904.1\|4217835_4219287_+\|pyruvate-kinase	unknown	unknown	gnl\|CDD\|235619
NZ_CP045767.1\|WP_014719750.1\|4231371_4232841_-\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|236531
NZ_CP045767.1\|WP_032902736.1\|4214319_4215315_+\|MoxR-family-ATPase	unknown	unknown	gnl\|CDD\|223786
NZ_CP045767.1\|WP_019821231.1\|4210672_4211653_+\|stage-II-sporulation-protein-M	unknown	unknown	gnl\|CDD\|224219
NZ_CP045767.1\|WP_019817341.1\|4227671_4228427_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227049
NZ_CP045767.1\|WP_014719739.1\|4213165_4214323_+\|DUF4350-domain-containing-protein	unknown	unknown	gnl\|CDD\|379527
NZ_CP045767.1\|WP_032902737.1\|4211639_4213169_+\|DUF4129-domain-containing-protein	unknown	unknown	gnl\|CDD\|379261
NZ_CP045767.1\|WP_019817340.1\|4229362_4229608_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045767.1\|WP_032902730.1\|4229649_4229991_-\|antibiotic-biosynthesis-monooxygenase	unknown	unknown	gnl\|CDD\|367760
NZ_CP045767.1\|WP_003193916.1\|4230318_4231248_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|377694

Protein	Function_ID	Function_description	E-value
NZ_CP045767.1\|WP_032902734.1\|4215322_4216654_+\|DUF58-domain-containing-protein	gnl\|CDD\|224635	COG1721, COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only].	5.99068e-67
NZ_CP045767.1\|WP_014719746.1\|4226211_4227531_+\|MFS-transporter	gnl\|CDD\|340925	cd17367, MFS_KgtP, Alpha-ketoglutarate permease of the Major Facilitator Superfamily of transporters. This subfamily includes Escherichia coli alpha-ketoglutarate permease (KgtP) and similar proteins. KgtP is a constitutively expressed proton symporter that functions in the uptake of alpha-ketoglutarate across the boundary membrane. Also included is a putative transporter from Pseudomonas aeruginosa named dicarboxylic acid transporter PcaT. The KgtP subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	0
NZ_CP045767.1\|WP_020302719.1\|4219500_4220442_-\|iron-sulfur-binding-ferredoxin-reductase	gnl\|CDD\|235575	PRK05713, PRK05713, iron-sulfur-binding ferredoxin reductase.	0
NZ_CP045767.1\|WP_003193907.1\|4220658_4222182_+\|fumarate-hydratase	gnl\|CDD\|224862	COG1951, TtdA, Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain [Energy production and conversion].	8.39593e-145
NZ_CP045767.1\|WP_014719748.1\|4228604_4229237_+\|flavin-reductase-family-protein	gnl\|CDD\|224766	COG1853, COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family [General function prediction only].	1.97597e-40
NZ_CP045767.1\|WP_019821226.1\|4216706_4217066_-\|PilZ-domain-containing-protein	gnl\|CDD\|377796	pfam07238, PilZ, PilZ domain. PilZ is a c-di-GMP binding domain which is found C terminal to pfam07317. Proteins which contain PilZ are known to interact with the flagellar switch-complex proteins FliG and FliM. This interaction results in a reduction of torque generation and induces CCW motor bias. This domain forms a beta barrel structure.	4.76656e-05
NZ_CP045767.1\|WP_032902728.1\|4232830_4233565_-\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	4.40205e-80
NZ_CP045767.1\|WP_014719745.1\|4224616_4225942_+\|sigma-54-dependent-Fis-family-transcriptional-regulator	gnl\|CDD\|225114	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms].	0
NZ_CP045767.1\|WP_032902732.1\|4222856_4224623_+\|sensor-histidine-kinase	gnl\|CDD\|226654	COG4191, COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms].	0
NZ_CP045767.1\|WP_003193904.1\|4217835_4219287_+\|pyruvate-kinase	gnl\|CDD\|235619	PRK05826, PRK05826, pyruvate kinase; Provisional.	0
NZ_CP045767.1\|WP_014719750.1\|4231371_4232841_-\|HAMP-domain-containing-protein	gnl\|CDD\|236531	PRK09467, envZ, osmolarity sensor protein; Provisional.	1.52353e-46
NZ_CP045767.1\|WP_032902736.1\|4214319_4215315_+\|MoxR-family-ATPase	gnl\|CDD\|223786	COG0714, COG0714, MoxR-like ATPases [General function prediction only].	1.03245e-94
NZ_CP045767.1\|WP_019821231.1\|4210672_4211653_+\|stage-II-sporulation-protein-M	gnl\|CDD\|224219	COG1300, SpoIIM, Uncharacterized membrane protein [Function unknown].	5.17621e-46
NZ_CP045767.1\|WP_019817341.1\|4227671_4228427_-\|hypothetical-protein	gnl\|CDD\|227049	COG4705, COG4705, Uncharacterized membrane-anchored protein conserved in bacteria [Function unknown].	1.80347e-91
NZ_CP045767.1\|WP_014719739.1\|4213165_4214323_+\|DUF4350-domain-containing-protein	gnl\|CDD\|379527	pfam14258, DUF4350, Domain of unknown function (DUF4350). This domain family is found in bacteria, archaea and eukaryotes, and is approximately 70 amino acids in length.	9.18509e-08
NZ_CP045767.1\|WP_032902737.1\|4211639_4213169_+\|DUF4129-domain-containing-protein	gnl\|CDD\|379261	pfam13559, DUF4129, Domain of unknown function (DUF4129). This presumed domain is found at the C-terminus of proteins that contain a transglutaminase core domain. The function of this domain is unknown. The domain has a conserved TXXE motif.	4.73731e-05
NZ_CP045767.1\|WP_032902730.1\|4229649_4229991_-\|antibiotic-biosynthesis-monooxygenase	gnl\|CDD\|367760	pfam03992, ABM, Antibiotic biosynthesis monooxygenase. This domain is found in monooxygenases involved in the biosynthesis of several antibiotics by Streptomyces species. It's occurrence as a repeat in Streptomyces coelicolor SCO1909 is suggestive that the other proteins function as multimers. There is also a conserved histidine which is likely to be an active site residue.	7.84851e-11
NZ_CP045767.1\|WP_003193916.1\|4230318_4231248_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|377694	pfam06719, AraC_N, AraC-type transcriptional regulator N-terminus. This family represents the N-terminus of bacterial ARAC-type transcriptional regulators. In E. coli, these regulate the L-arabinose operon through sensing the presence of arabinose, and when the sugar is present, transmitting this information from the arabinose-binding domains to the protein's DNA-binding domains. This family might represent the N-terminal arm of the protein, which binds to the C-terminal DNA binding domains to hold them in a state where the protein prefers to loop and remain non-activating. All family members contain the pfam00165 domain.	3.48757e-57

>NZ_CP045767.1|WP_003193907.1|4220658_4222182_+|fumarate-hydratase
MTVIKQDDLIQSVADALQFISYYHPVDFIQAMHEAYLREESPAARDSIAQILINSRMCATGHRPICQDTGIVTVFVRVGMDVRWDGATMGLDDMINEGVRRAYNLPENVLRASILADPAGARKNTKDNTPAVIHYSIVPGNTVEVDVAAKGGGSENKSKMAMLNPSDSIVDWVLKTVPTMGAGWCPPGMLGIGIGGTAEKAAVMAKEVLMESIDIHELKKRGPQNRIEEMRLELFEKVNQLGIGAQGLGGLTTVLDVKIMDYPTHAASLPVCMIPNCAATRHAHFVLDGSGPASLEAPPLDAYPEIVWEAGPSARRVNLDTLTPEEVQSWKPGETVLLNGKMLTGRDAAHKRMVEMLNKGETLPVDLKGRFIYYVGPVDPVREEVVGPAGPTTATRMDKFTRQILEQTGLLGMIGKSERGPTAIEAIKDHKAVYLMAVGGAAYLVAQAIKKSRVVAFAELGMEAIYEFDVKDMPVTVAVDSKGESVHITGPAIWQKKISDSLAVEVQ
>NZ_CP045767.1|WP_020302719.1|4219500_4220442_-|iron-sulfur-binding-ferredoxin-reductase
MPELYVGERHWSVTPGSNLLDALNQAGVAVPFSCRAGSCHACLVRCEGEVDDQQPEALSPTQRQQGWRLACQCRVIADLKVDAFDPQRDGLPAQVVGADWLSSTVLRLRLQPERALRYRAGQHLVLWAGQVARPYSLASLPQEEPYLEFHIDCRQPGAFSDAARQLKVGDPVCLGELRGGALHYDPDWQSRPLWLLASGTGLGPLWGVLREALRQDHQGEIRVIHLAHEAEAHYLAEPLAALAAQHGHLTVELWTAAQLQPALAQLRLVSRHTLALLCGHPASVEAFSKRLFLAGLPRNQLLADVFLARPFTL
>NZ_CP045767.1|WP_003193904.1|4217835_4219287_+|pyruvate-kinase
MSVRRTKIVATLGPASNSPEVLEQLILAGLDVARLNFSHGTPDEHKARAKLVRDLAAKHGRFVALLGDLQGPKIRIAKFTNKRIELKIGDKFTFSTSHPLTEGTQDVVGIDYPDLVKDCGVGDELLLDDGRVVMRVDTATPTELNCTVIIGGPLSDHKGINRRGGGLTAPALTEKDKADIKLAAEMEVDYLAVSFPRDAADMEYARKLRDEAGGTAWLVAKIERAEAVADDETLDGLIKASDAVMVARGDLGVEIGDAELIGIQKKIILHARRHNKAVIVATQMMESMIQNPMPTRAEVSDVANAVLDYTDAVMLSAESAAGPYPLEAVQAMARICVGAEKHPTSKTSSHRIGKVFESCDQSIALAAMYTANHFPGVKAIIALTESGYTPLIMSRIRSSVPIYAFTPHREAQARAAMFRGVYTIPFDPASLAPNEVSQKAIDELVKRGVVEKGDWVILTKGDSYHTTGGTNGMKILHVGDPQV
>NZ_CP045767.1|WP_003193903.1|4217287_4217662_-|hypothetical-protein
MRILLVAALAVSVVGCTRWSMDHHLNNAYRAYGVGDCQRVTLELSQVDRESRTRRYVQPEVSMLRGQCLERQKLFVDAAQTYQFIIGHYPSSEYAYRARARLDTLQQLGHLPAAGLAKPRPASL
>NZ_CP045767.1|WP_019821226.1|4216706_4217066_-|PilZ-domain-containing-protein
MFTERRIERHQLPYFLQVFNRITDKPIGYLGNVSENGLMLISSLPMMTEVDFELRLKVPVAQGEFKAIDLTATCLWSHEDVTPQHYDSGFSVLEAPEEYRHLINALLQYFSFYPLQASV
>NZ_CP045767.1|WP_032902734.1|4215322_4216654_+|DUF58-domain-containing-protein
MKPTRLLLTWLGVLLGLNILLGASAALQFKVPATLHSVAWGLLLALLLLAMLDAARLRRRPSVRVYRTLPGSLALGRWEEIRLCLEHDYPQPLTVQVFDHVPDGLAVENLPQSIQLRPGERAELGYRVRPLRRGHFHFSRCELLLPSPLGLWSARRWVETHDATRVYPDFARLYGAQLRGVDNWLSQLGVRQHQRRGLGLEFHQLREFREGDSLRQIDWKATARQRTPIAREYQDERDQQIVFMLDCGQHMRSQDDELSHFDHALNACLLLSYVALRQGDAVGLCTFASNQPRYLKPVKGSGQLNLLLNAVYDLQTTRKTADYQAAASQLLARQKRRALVIIVTNLRDEEDEALMAAVQRIGRHHRVLVASLREEVLDQLRQTPVQTLPEALAYSGTIDYLNTRNQRHDRLSAHGLSVLDTLPSALGAGLVTRYLEWKKAGVF
>NZ_CP045767.1|WP_032902736.1|4214319_4215315_+|MoxR-family-ATPase
MSDSPLATALTAENLQQASQQAQALRVELRKAVIGQDPVIDDVLTALIAGGHVLLEGVPGLGKTLLVRALARCFGGDFARIQFTPDLMPSDVTGHAVYDLQTEQFKLRKGPLFTHLLLADEINRAPAKTQAALLEAMQERQVTLEGEALPIGQPFMVLATQNPIEQEGTYPLPEAELDRFMLKVRMDYPDALQELDMVREVTRSSKADMLEVQPLRTVLQAEDVVTMQQIASDLPLDEQVLDYAVRLARATRSWPGLAIGAGPRASIALVRGARARALLRGGEFVTPDDIKGCALAVLRHRVRIAPELDIDGLEVDQVLQQLLDQIAAPRQ
>NZ_CP045767.1|WP_014719739.1|4213165_4214323_+|DUF4350-domain-containing-protein
MNRALLWTALLLACLVGAGGLYAWHKAIPYEEVVDRGPSPEARANPYLAAEHFLRQHGLVVAHAKGLERLAELPAKGHSLLLLGERSNMTPRQVDQLLGWAKAGGHLLLVAEALWDEEAGTSGDLLLDRLTIRQTLSDTFDEPVPPRKKTKPDLTKLYVDNETAPAYFSFDTYFNLTDPKHLAQFSANSAQSSHLMQLDLGQGRVTVITDSDLWKTTDIGNHDNAWLLWYLNQGTDVTLLFNSDTDDLFTLLLRYFPQALVALVALLALGLWQAGMRQGPIQTPAPKARRQLQEHLQASADFLLRRSGQGTLLQALRHDILRAARRRHPGFEHLDASEQRQVLEHLTRQPPHIISQALEPVALKRLSSADFSRQVAHLQTLRNAL
>NZ_CP045767.1|WP_032902737.1|4211639_4213169_+|DUF4129-domain-containing-protein
MRLTDASVVIRPRTSWEAMDLGVLMAREHRVLLMGSWALVSLPVFSLLTVLLWNYPSLVMFLFWWLKPAFDRLPLYILSKALFGEPPSLKQAVRQWPQLLKGQLFASLTWRRLSMSRSFTLPVSQLEGLDGDARQRRLGVLLQRNAGAARWLTTIGVHMEIGLWFGGMTLFYLFIPQQVELDWDWQRLIFASASDVLWLEHLSNAFYALVLVFWEPIYVACGFSLYLNRRTVLEAWDLELVFRRLRQRLSNVAPLLLLVVGLALLHISPPTMADETTAHKPLSTQAASQSIQALLEKPPFKNPETVTRYRFGEEKAPVKNKATGDGKLPGWLQALLDNLNSDTFKYVAKTLEILLWSLVIGGLALVCWRYREWLRTFVSRLGPTRTAAPSPVPAQLFGLELGTETLPEDIASTAEQLWPTHPREALGLLYRGLLSRLLHEFDLPLTSADTEGQVLERVHHLQQPQLLAFSDELTRHWQNLAYGHRLPPSSAQQKLCSDWRALFSDGAGQ
>NZ_CP045767.1|WP_019821231.1|4210672_4211653_+|stage-II-sporulation-protein-M
MKQSLFESRHQRQWHTFAEQLTQLEQGKAKAADVADFPHQYRRLCQHLALAQQRGYSSYLVDTLQQLALRGHQQLYRHRSQLTANILAFLLADFPRLVREQWRFVLIAGLLFFGSLVGIALLVYLFPDLIYSIISPQQVADMQGMYNPDASRLGRAAERAASEDWMMFGYYVMHNIGIAFQTFAAGLLFGLGSVFFLIFNGLVIGAVSGHLTDIGYGQTFWSFVIGHGAFELSAITLAGAAGLQLGWSLVAPGRLARSEALRLAARKSVRMLCGVMVFLLIAAFIEAYWSSTTRIEPWIKYAVGAALWLLVAAYLSLAGRSRHAPD
>NZ_CP045767.1|WP_032902732.1|4222856_4224623_+|sensor-histidine-kinase
MIVIPRPLRLTFYSLLIIAGAVLAAALATRHAERQALVDDAARANQQLALYANSLHTLIERYRALPAVLALDSEMISALKGPLDATTQDRLNRKLERINGAAQSSTLELMDRTGLAVAASNWNLPSSYVGHNYAFRPYFSQTLSHGTGRFYAVGVTTGIPGYFLSSAVVDEHEQFLGAMVVKLEFPELEREWAQGNDLLLVSDARGIVFIANQPGWRYRNLRPLSENDLAELKATRQYDKKQLQPLDTQPLQRFDENSHLIRVGGPDGNANYIWESLPLKREGWTLHLLRKPQFAFEDQRNAGLAAAGSWLALVFLVLFLSQRWRLARLRQRSREELEQLVEERTQALRTAQDGLVQSAKLAALGQMSAALAHEINQPLTAQRMQLATLRLLLDHGRVDDAYKALTPLDDMLTRMAALTGHLKTFARKSPSGLREKLDLATVVDQSLHLLDARLRDEAIGVVLDLTRPAWVRGDAIRLEQVLINLLRNALDAMADKPRKRLEIRLHADQQLWQLSVCDSGGGIAEEHLSSVFDPFFTTKPVGDGLGLGLAVSYAIVHELGGRLSAANRGDGATFTLTLPIALETPDLC
>NZ_CP045767.1|WP_014719745.1|4224616_4225942_+|sigma-54-dependent-Fis-family-transcriptional-regulator
MLNAVIVVDDEASIRTAVEQWLSLSGFDVQLFSRAEECLAQLPKDFAGVILSDVRMPGLSGLELLAEVQRRDADLPVILLTGHGDVPMAVEAMRDGAYDFLEKPFSPDALLNSLRRALDKRGLILENRRLHQQADHRAQLESSLLGVSKGLQSLRRQVLDLASLPVNVLIRGETGSGKELVARCLHDFGPRAKKPFVALNCAAIPEQLFEAELFGHESGAFTGAHGKRIGKLEYAHGGTLFLDEIESMPLAQQVKLLRVLQEQKLERLGSNQSIQVDLRIIAATKPDLLEEARAGRFREDLAYRLNVAQLRLPPLRERREDIPLLYEHFAQSAAERLGRQVEPLSGPQLGRLLSHDWPGNVRELANVAERQVLGLDEPEPQGIEAGQSLAAQQEAFEAHCLKAALTRHKGDIKAVLAELQLPRRTFNEKMQRHGLVREMFV
>NZ_CP045767.1|WP_014719746.1|4226211_4227531_+|MFS-transporter
MDNSNTVPLGSTAAKAQERTTSSRIKSIFSGSVGNMVEWYDWYVYAAFSLYFAKAFFPKGDTTAQLLNTAAIFAVGFLMRPIGGWLMGLYADKVGRKKALMASVYLMCFGSLLIALSPGYEIIGIGAPILLVFARLLQGLSVGGEYGTSATYLSEMATKERRGFYSSFQYVTLISGQLIALAVLIVLQQVLTTEQLYAWGWRIPFAIGALCAVVALYLRRGMEETESFTKKEKAKESAMRTLMRHPKELMTVVGLTMGGTLAFYTYTTYMQKYLVNTVGMSISDSTTISAATLFLFMCLQPIIGGLSDKIGRRPILIAFGVLGTLFTVPILTTLHTIQSWWGAFFLIMAALIIVSGYTSINAVVKAELFPTEIRALGVGLPYALTVSIFGGTAEYIALWFKSIGMETGYYWYVTACIAVSLMVYVTMKDTRKHSRITTD
>NZ_CP045767.1|WP_019817341.1|4227671_4228427_-|hypothetical-protein
MNKLPQITLAFWVMKICATTLGETAGDLLSMTLNVGYAISSMILISVFLVTLVTQLWSKTYNPVLYWIVILSTSTAGTTMSDFMDRTLGLGYATGSMILIVILMIIFALWHLSGDSLNVNKVQTFRGELFYWMAILFSNTLGTALGDFLADDSGLGFAGGALLIGSTIAAVVVLKYFTRISSVLLFWVAFVLTRPFGATLGDFLTKPHEKGGLDFGTIGSSAVLAAVLVVMIAGASYAQRRYGRNEAAELS
>NZ_CP045767.1|WP_014719748.1|4228604_4229237_+|flavin-reductase-family-protein
MPDDIHFYEPANGHGLPHDPFNAIVGPRPIGWISSHDREGRLNLAPYSFFNAFNYIPPIIGFSSVGRKDSLNNIEQTGEFVWNLATRPLAEQMNQSCAAVSPEVNEFELSGLTPVASKIVGVPRVGESPVSFECKVTQIIQLQRADQQLVPSWLVLGEVVAVHIAKWLLKDGIYDTAAAEPILRGGGPADYFQLGPEALFKMYRPGATKP
>NZ_CP045767.1|WP_019817340.1|4229362_4229608_-|hypothetical-protein
MARKQFAHHEAVSAVVPGEGGYSAAVAVKALDGMGAPRFHKILDGQTFKTASDADDAATLQLEHLVDVDAEGQLTWATAER
>NZ_CP045767.1|WP_032902730.1|4229649_4229991_-|antibiotic-biosynthesis-monooxygenase
MSTPIPASHMAFIRARSGCGTELGARLSSLIEPGRQAQGCLQFSLQHSQVDPDVWLVSGFWSSEQAMSAYFNSPALMIFTELLNDMVVRSMDFQTFTDASAAQAYGEYLQLAG
>NZ_CP045767.1|WP_003193916.1|4230318_4231248_+|AraC-family-transcriptional-regulator
MPSPESKPVPLDAEMEKQRAELASIVHRHTWEDGSYGTAITSLYLNRHNAPRDFMPVLVEPALCILASGSKEVRLADEIFAYDPLNYLVFSVAMPVAGRIIDATAEDPNLSVRINIDPAQLTALIAEAGPMGVPSRPTSRGMYVDRIDHALLDAVLRLTRLLDTPKDIAMLAPLINREILYRLLRGPQGYRLYEIAVANSQSHRVSQAITWLNGNYEQPLRIDDLAKEVNLSVSTLHHRFKAITAMSPLQYQKQLRLQEARRLMIAEGLEASAAGYRVGYESPSQFSREYSRLFGAPPLRDLARLRQSI
>NZ_CP045767.1|WP_014719750.1|4231371_4232841_-|HAMP-domain-containing-protein
MPTEALNERRRRFPVPRSLLGRMLLLTLLAVLFAQALSSVIWVSQLRATQLEGLVTSARSLAHSMTASVSYFRSLPVAYRPLVLDQLRSMGGTRFVVTLNDRPLDMQLLPETPRKQAVLVAVDEVLRQTLGADVHISVEFVSAEDLRIFNAGLKLDELPRSWAHYALTLEPVNPPVLVTQIQLAPGEWLYIASLLPEPYTSLEEQGLPSQQVWFIVLTSGFLLLFIGLLVHWQSRPLKRLARAARDMSLGADVEPVAEGGGSEVVEVGRAFNAMRERISRYLTERSQLFSAISHDLRTPITRLRLRVELLEDENLQNKFGRDLDELELLVKGALQCVKDTDIHENIQPVDLNHVLECLVEPYLAPHGNGRVTLDGAALSAYPGKPLALKRCIGNLIDNALKYGQNAHLHIEDDGAQFILHVDDEGPGVPQQRLEQVFEPHFRLAGQQQGYGLGLGIARNIAHSHGGEVSLQNLREGGLRVTLQLPRTLD
>NZ_CP045767.1|WP_032902728.1|4232830_4233565_-|response-regulator-transcription-factor
MSVISKSILLVDDDQEIRELLQTYLSRAGFQVRGVSDGAGFRQAMNEAPCDLVILDVMLPDEDGFSLCRWIRQHPRQAQVPIIMLTASSDEADRVIGLELGADDYIGKPFSPRELQARIKALLRRCQFGQERSSGGDVWGFDEWRLDMISHRLFHVDGEEVILSGADFALLKLFLDHPQQILDRDTIGNATRGRDLMPLDRIVDMAVSRLRQRLRDTEKPPRLIRTVRGSGYQLAASVVAGNAH

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP045767_1	1.2\|147672\|30\|NZ_CP045767\|CRISPRCasFinder,CRT,PILER-CR	147672-147701	30	MN693359	Marine virus AFVG_25M82, complete genome	21144-21173	8	0.733

1. spacer 1.2|147672|30|NZ_CP045767|CRISPRCasFinder,CRT,PILER-CR matches to MN693359 (Marine virus AFVG_25M82, complete genome) position: , mismatch: 8, identity: 0.733

ctcaaaagcgattcgcttatcgttggattc	CRISPR spacer
agtaaaagcaattcgcttatcgttgcgaac	Protospacer
  .******.*************** .  *

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

547311 : 632576

uncultured_Caudovirales_phage(22.58%)

holin,tail,plate,tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014717137.1\|547311_547782_+\|tRNA	Cys-tRNA(Pro) deacylase	NA	NA	NA	NA
WP_032903291.1\|547915_549025_-	ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	1.9e-21	39.1
WP_014717139.1\|549021_549942_-	ornithine carbamoyltransferase	A0A1J0F9B8	Only_Syngen_Nebraska_virus	7.1e-19	27.4
WP_014717140.1\|550375_552484_+	molybdopterin oxidoreductase family protein	NA	NA	NA	NA
WP_014717141.1\|552561_552900_+	Grx4 family monothiol glutaredoxin	NA	NA	NA	NA
WP_012722487.1\|552968_553439_-	bacterioferritin	NA	NA	NA	NA
WP_003188977.1\|553640_553859_-	bacterioferritin-associated ferredoxin	NA	NA	NA	NA
WP_003172097.1\|554102_554705_+	peroxiredoxin	NA	NA	NA	NA
WP_003188980.1\|554769_555441_-	ribonuclease T	NA	NA	NA	NA
WP_014717142.1\|555437_556484_-	dihydroorotase	NA	NA	NA	NA
WP_032903290.1\|556640_557549_+	OmpA family protein	NA	NA	NA	NA
WP_003188984.1\|557677_558895_+	argininosuccinate synthase	NA	NA	NA	NA
WP_003188986.1\|559503_560136_+	response regulator transcription factor	NA	NA	NA	NA
WP_014717144.1\|560219_560402_-	hypothetical protein	NA	NA	NA	NA
WP_003188989.1\|560509_561148_-	endonuclease III	NA	NA	NA	NA
WP_019817697.1\|561208_562177_-	electron transport complex subunit RsxB	NA	NA	NA	NA
WP_032903287.1\|562264_564316_-\|tRNA	methionine--tRNA ligase	NA	NA	NA	NA
WP_032903285.1\|564489_565584_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA
WP_014717148.1\|566106_566430_-	ferredoxin family protein	NA	NA	NA	NA
WP_020301168.1\|566572_569164_-	DNA mismatch repair protein MutS	A0A1V0SJ67	Klosneuvirus	5.1e-30	22.0
WP_080643468.1\|569378_569579_-	DUF3077 domain-containing protein	NA	NA	NA	NA
WP_032903284.1\|570032_572720_+	phosphoenolpyruvate carboxylase	NA	NA	NA	NA
WP_108538567.1\|572784_573840_+	hydroxyacid dehydrogenase	M1NSB9	Streptococcus_phage	1.9e-20	35.8
WP_020301165.1\|573867_574521_+	RraA family protein	NA	NA	NA	NA
WP_032903392.1\|574562_574757_+	ultraviolet light resistance protein B	NA	NA	NA	NA
WP_032903281.1\|574818_575190_-	hypothetical protein	NA	NA	NA	NA
WP_014717156.1\|575182_575671_-	DUF4065 domain-containing protein	D0UIM3	Aggregatibacter_phage	3.8e-27	44.5
WP_014717157.1\|575905_576640_+	helix-turn-helix transcriptional regulator	B5TK58	Pseudomonas_phage	6.3e-119	87.7
WP_005785384.1\|577230_577569_+\|holin	pyocin R2, holin	B5TK61	Pseudomonas_phage	1.4e-44	85.4
WP_014717158.1\|577592_578108_+	hypothetical protein	NA	NA	NA	NA
WP_014717159.1\|578111_578723_+\|plate	phage baseplate assembly protein V	A0A2H4JBW8	uncultured_Caudovirales_phage	3.8e-45	53.8
WP_014717160.1\|578732_579065_+\|plate	phage baseplate protein	A0A2H4JI46	uncultured_Caudovirales_phage	5.1e-36	67.3
WP_014717161.1\|579061_580057_+\|plate	baseplate J protein	A0A2H4JC04	uncultured_Caudovirales_phage	3.2e-113	64.4
WP_032903280.1\|580053_580692_+\|tail	phage tail protein I	A0A2H4JDK0	uncultured_Caudovirales_phage	1.6e-38	52.5
WP_032903278.1\|580688_581225_+\|tail	tail fiber protein	A2I2X8	Vibrio_virus	9.5e-48	60.7
WP_032903276.1\|581314_582067_+	hypothetical protein	NA	NA	NA	NA
WP_032903274.1\|582078_582315_+	hypothetical protein	M4NK32	Synechococcus_phage	2.3e-06	45.0
WP_014717166.1\|582576_583743_+\|tail	tail protein	B0ZSG8	Halomonas_phage	7.2e-125	57.0
WP_014717167.1\|583742_584249_+\|tail	phage tail protein	Q6R4W3	Vibrio_virus	2.2e-22	34.5
WP_014717168.1\|584429_585002_+\|tail	phage tail assembly protein	B0ZSH0	Halomonas_phage	1.6e-29	39.3
WP_081036835.1\|585211_587353_+\|tail	phage tail tape measure protein	NA	NA	NA	NA
WP_014717171.1\|587352_587736_+\|tail	phage tail protein	A0A2H4JAC8	uncultured_Caudovirales_phage	1.3e-35	58.3
WP_014717172.1\|587728_587941_+\|tail	tail protein	A0A2H4JGD9	uncultured_Caudovirales_phage	4.0e-18	65.7
WP_032903272.1\|587950_588952_+\|tail	phage-like tail protein	A0A2H4JH05	uncultured_Caudovirales_phage	3.0e-95	52.4
WP_014717174.1\|588974_589532_+	glycoside hydrolase family 19 protein	B5TK83	Pseudomonas_phage	1.6e-74	72.1
WP_020301157.1\|589684_590185_+	CinA family protein	B5TK85	Pseudomonas_phage	1.8e-69	82.5
WP_014717176.1\|590268_591327_+	recombinase RecA	A0A0S2MVG1	Bacillus_phage	2.4e-111	62.4
WP_020301156.1\|591335_591803_+	recombination regulator RecX	NA	NA	NA	NA
WP_020301155.1\|591864_592977_-	TIGR00730 family Rossman fold protein	NA	NA	NA	NA
WP_014717179.1\|593271_593706_-	hypothetical protein	NA	NA	NA	NA
WP_032903391.1\|593884_594604_+	DTW domain-containing protein	NA	NA	NA	NA
WP_003189050.1\|594855_595506_+	response regulator transcription factor	NA	NA	NA	NA
WP_019817716.1\|595581_595944_+	diacylglycerol kinase	NA	NA	NA	NA
WP_016977932.1\|595947_596934_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_003189055.1\|596999_597779_+	ferredoxin--NADP reductase	NA	NA	NA	NA
WP_032903271.1\|597911_598607_-\|tRNA	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	NA	NA	NA	NA
WP_005785469.1\|598611_599073_-	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	2.6e-38	52.0
WP_032903270.1\|599141_599852_-	RNA-binding protein S4	NA	NA	NA	NA
WP_020301153.1\|600059_600530_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_003231334.1\|600630_601971_-	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA
WP_014717185.1\|602152_602488_-	putative addiction module antidote protein	NA	NA	NA	NA
WP_032903269.1\|602484_602808_-	type II toxin-antitoxin system RelE/ParE family toxin	A0A141GEX6	Brucella_phage	2.4e-14	39.8
WP_032903268.1\|603221_605123_+	potassium transporter Kup	M1IAJ4	Acanthocystis_turfacea_Chlorella_virus	1.7e-75	33.3
WP_032903266.1\|605258_606365_+	NADH:flavin oxidoreductase/NADH oxidase	NA	NA	NA	NA
WP_014717189.1\|606468_607005_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_014717190.1\|607210_607396_+	hypothetical protein	NA	NA	NA	NA
WP_014717191.1\|607450_609076_-	glucan biosynthesis protein D	NA	NA	NA	NA
WP_020301150.1\|609380_610088_+	tellurite resistance TerB family protein	NA	NA	NA	NA
WP_014717193.1\|610298_611921_+	methyl-accepting chemotaxis protein	NA	NA	NA	NA
WP_020301149.1\|611920_612433_+	purine-binding chemotaxis protein CheW	NA	NA	NA	NA
WP_020301148.1\|612429_613692_+	chemotaxis-related methyltransferase	NA	NA	NA	NA
WP_032903264.1\|613688_614390_+	purine-binding chemotaxis protein CheW	NA	NA	NA	NA
WP_032903262.1\|614386_616663_+	hybrid sensor histidine kinase/response regulator	Q56AR1	Bacillus_thuringiensis_phage	7.4e-09	27.4
WP_003189079.1\|616659_617670_+	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA
WP_014717198.1\|617722_618724_+	PleD family two-component system response regulator	A0A127AWB9	Bacillus_phage	1.6e-16	35.2
WP_096001736.1\|618899_619994_+	peptide chain release factor 2	A0A0S4KWG0	Pseudomonas_phage	2.0e-07	46.6
WP_003189082.1\|620074_621577_+\|tRNA	lysine--tRNA ligase	A0A2K9KZX5	Tupanvirus	5.5e-85	39.4
WP_014717200.1\|621720_622437_+	TetR family transcriptional regulator	NA	NA	NA	NA
WP_014717201.1\|622532_623810_+	flavohemoglobin expression-modulating QEGLA motif protein	NA	NA	NA	NA
WP_014717202.1\|623902_624808_+	alpha/beta hydrolase	A0A1C9C5K3	Heterosigma_akashiwo_virus	1.3e-09	30.0
WP_003172217.1\|624804_625131_+	hypothetical protein	NA	NA	NA	NA
WP_014717203.1\|625282_625639_+	hypothetical protein	NA	NA	NA	NA
WP_003189093.1\|626130_626916_-	OmpA family protein	NA	NA	NA	NA
WP_003189094.1\|626972_627398_-	DUF4398 domain-containing protein	NA	NA	NA	NA
WP_014717206.1\|627681_628026_-	hypothetical protein	NA	NA	NA	NA
WP_032903260.1\|628225_630871_+	phosphoenolpyruvate carboxylase	NA	NA	NA	NA
WP_003189104.1\|631151_631799_+	adenylate kinase	A0A2K9L833	Tupanvirus	8.6e-11	32.5
WP_019817729.1\|631889_632576_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	NA	NA	NA	NA

DBSCAN-SWA_2

690271 : 698716

Synechococcus_phage(28.57%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014717243.1\|690271_691384_+	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	E3SJ82	Synechococcus_phage	4.3e-34	30.4
WP_020300971.1\|691392_692238_+	S-formylglutathione hydrolase	NA	NA	NA	NA
WP_003189207.1\|692292_692766_+	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA
WP_032903247.1\|692762_693821_+\|tRNA	tRNA pseudouridine(13) synthase TruD	NA	NA	NA	NA
WP_014717247.1\|693808_694558_+	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	5.5e-62	49.4
WP_003189211.1\|694557_695235_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	3.1e-43	53.1
WP_032893170.1\|695444_696281_+	peptidoglycan DD-metalloendopeptidase family protein	A0A0S2SXL7	Bacillus_phage	8.2e-06	33.3
WP_032903246.1\|696387_697395_+	RNA polymerase sigma factor RpoS	G8CLC7	Synechococcus_phage	3.0e-34	35.8
WP_002554837.1\|697551_697761_-	cold-shock protein	Q9AZD3	Lactococcus_phage	2.2e-16	66.7
WP_003189215.1\|698149_698716_+	dCTP deaminase	S5VM63	Pseudomonas_phage	3.7e-74	73.3

DBSCAN-SWA_3

1534813 : 1588931

Bacillus_phage(33.33%)

protease,transposase,integrase

attL 1526752:1526767|attR 1557407:1557422

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1526752:1526767	attL	NA	NA	NA	NA
WP_153649588.1\|1534813_1535182_-\|protease	AprI/Inh family metalloprotease inhibitor	NA	NA	NA	NA
WP_153649589.1\|1536320_1537289_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_153649590.1\|1537550_1538375_-	alpha/beta hydrolase fold domain-containing protein	NA	NA	NA	NA
WP_153649591.1\|1538463_1539876_-\|protease	matrixin family metalloprotease	NA	NA	NA	NA
WP_153649592.1\|1540213_1540501_+	hypothetical protein	NA	NA	NA	NA
WP_153649593.1\|1540611_1541820_+	family 10 glycosylhydrolase	NA	NA	NA	NA
WP_153649594.1\|1541822_1542599_+	N-acetylmuramoyl-L-alanine amidase	A0A076YN96	Rhizobium_phage	3.3e-09	27.0
WP_153649595.1\|1543637_1543907_+	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA
WP_153649596.1\|1544180_1544387_-\|transposase	IS3 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	3.4e-14	60.0
WP_153649597.1\|1545837_1546215_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	A0A1B1P773	Bacillus_phage	1.1e-29	57.0
WP_153649598.1\|1546150_1546636_-	helix-turn-helix domain-containing protein	A0A1B1P776	Bacillus_phage	1.2e-09	31.7
WP_153649599.1\|1547572_1548553_+\|transposase	IS5 family transposase	A0A077K814	Ralstonia_phage	3.6e-85	52.1
WP_032903481.1\|1549498_1549780_-	lipoprotein	NA	NA	NA	NA
WP_032903482.1\|1549852_1550269_-	hypothetical protein	NA	NA	NA	NA
WP_019821450.1\|1550311_1550920_-	hypothetical protein	NA	NA	NA	NA
WP_014718001.1\|1551352_1551652_-	hypothetical protein	NA	NA	NA	NA
WP_014718002.1\|1552562_1553531_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_032903484.1\|1553633_1554881_+	MFS transporter	NA	NA	NA	NA
WP_153649600.1\|1554999_1556709_+	polyurethanase	NA	NA	NA	NA
WP_032903486.1\|1556916_1558191_-	glycoside hydrolase 68 family protein	NA	NA	NA	NA
1557407:1557422	attR	NA	NA	NA	NA
WP_020303199.1\|1558396_1559275_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_014718007.1\|1559430_1559856_+	glyoxalase	NA	NA	NA	NA
WP_153649601.1\|1559968_1561174_+	cation:dicarboxylase symporter family transporter	NA	NA	NA	NA
WP_020303201.1\|1561278_1561860_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_032903487.1\|1561916_1563044_+	alkene reductase	NA	NA	NA	NA
WP_032892370.1\|1563088_1563832_+	SDR family oxidoreductase	W8CYX9	Bacillus_phage	2.1e-08	42.3
WP_014718012.1\|1563924_1564311_+	nuclear transport factor 2 family protein	NA	NA	NA	NA
WP_003190416.1\|1564624_1564846_+	hypothetical protein	NA	NA	NA	NA
WP_032903488.1\|1564860_1565376_+	hypothetical protein	NA	NA	NA	NA
WP_108538450.1\|1565391_1569537_-	PAS domain S-box protein	Q6XLV6	Feldmannia_irregularis_virus	4.7e-17	25.5
WP_014718015.1\|1569845_1570703_+	SDR family oxidoreductase	A0A2N9QUX2	Trichoplusia_ni_ascovirus	1.8e-69	49.8
WP_019821471.1\|1570961_1571201_-	hypothetical protein	NA	NA	NA	NA
WP_003190423.1\|1571197_1571455_-	hypothetical protein	NA	NA	NA	NA
WP_020303208.1\|1571557_1571839_-	hypothetical protein	NA	NA	NA	NA
WP_032903514.1\|1572012_1573302_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_014718018.1\|1573383_1574148_-	OBAP family protein	NA	NA	NA	NA
WP_014718020.1\|1575434_1575833_-	low affinity iron permease family protein	A0A1C9EHA1	Mycobacterium_phage	9.6e-05	35.4
WP_019821476.1\|1575955_1576456_+	CinA family protein	NA	NA	NA	NA
WP_020303212.1\|1576475_1576754_-	hypothetical protein	NA	NA	NA	NA
WP_003190434.1\|1576759_1577014_-	hypothetical protein	NA	NA	NA	NA
WP_003190457.1\|1577262_1577445_-	general stress protein	NA	NA	NA	NA
WP_032903490.1\|1577766_1577997_+	hypothetical protein	NA	NA	NA	NA
WP_014718025.1\|1578162_1579047_+	manganese catalase family protein	NA	NA	NA	NA
WP_019821478.1\|1579110_1579620_+	ferritin-like domain-containing protein	NA	NA	NA	NA
WP_032903491.1\|1579749_1581306_+	response regulator	NA	NA	NA	NA
WP_032903492.1\|1581472_1582369_-	protoheme IX farnesyltransferase	NA	NA	NA	NA
WP_032903493.1\|1582326_1582665_-	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA
WP_020303216.1\|1582666_1583281_-	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA
WP_032903494.1\|1583284_1585258_-	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA
WP_014718031.1\|1585260_1586184_-	ubiquinol oxidase subunit II	NA	NA	NA	NA
WP_020303217.1\|1586581_1586896_+	hypothetical protein	NA	NA	NA	NA
WP_003190473.1\|1587370_1587640_+	hypothetical protein	NA	NA	NA	NA
WP_032903495.1\|1587695_1587905_-	hypothetical protein	NA	NA	NA	NA
WP_032903496.1\|1588116_1588350_-	DUF2934 domain-containing protein	NA	NA	NA	NA
WP_014718035.1\|1588379_1588931_-\|protease	Clp protease	NA	NA	NA	NA

DBSCAN-SWA_4

3022589 : 3028808

uncultured_Caudovirales_phage(83.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003192069.1\|3022589_3022982_+	sulfurtransferase complex subunit TusD	A0A2H4JA39	uncultured_Caudovirales_phage	3.3e-58	86.2
WP_032902851.1\|3022983_3023334_+	sulfurtransferase complex subunit TusC	A0A2H4J8C0	uncultured_Caudovirales_phage	3.4e-38	67.8
WP_020302956.1\|3023333_3023612_+	sulfurtransferase complex subunit TusB	A0A2H4JG28	uncultured_Caudovirales_phage	4.0e-26	58.6
WP_014718893.1\|3023608_3023944_+	TusE/DsrC/DsvC family sulfur relay protein	A0A2H4J8B6	uncultured_Caudovirales_phage	8.0e-45	78.4
WP_014718894.1\|3023940_3024942_+	glycosyl transferase family protein	A0A2H4JBY5	uncultured_Caudovirales_phage	3.5e-168	86.3
WP_032902849.1\|3025030_3026026_+	glutathione S-transferase family protein	NA	NA	NA	NA
WP_014718896.1\|3026132_3027527_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA
WP_019816715.1\|3027527_3028808_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	4.1e-97	53.5

DBSCAN-SWA_5

3143327 : 3176271

Mollivirus(16.67%)

protease,coat

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014718965.1\|3143327_3144248_-\|coat	spore coat U domain-containing protein	NA	NA	NA	NA
WP_050587238.1\|3144325_3146674_-	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_014718967.1\|3146746_3147535_-	molecular chaperone	NA	NA	NA	NA
WP_014718968.1\|3147560_3148049_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_003192220.1\|3148051_3148594_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_014718969.1\|3148612_3149158_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_093114405.1\|3149151_3149643_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_032903447.1\|3149833_3150928_+	cell division protein ZapE	NA	NA	NA	NA
WP_032903446.1\|3150965_3152264_+	protein kinase	A0A0M4JT11	Mollivirus	4.4e-06	27.7
WP_020302352.1\|3152386_3153091_-	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_020302353.1\|3153200_3154526_-	MFS transporter	NA	NA	NA	NA
WP_014718974.1\|3154784_3155675_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_014718975.1\|3155650_3156505_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_032903445.1\|3156617_3157727_+	2-aminoethylphosphonate--pyruvate transaminase	NA	NA	NA	NA
WP_014718977.1\|3157755_3158583_+	phosphonoacetaldehyde hydrolase	NA	NA	NA	NA
WP_014718978.1\|3158697_3159252_+	cytochrome b	A0A0U2QLA7	Escherichia_phage	9.6e-19	43.3
WP_032903444.1\|3159403_3160294_-	pyridoxal-phosphate dependent enzyme	NA	NA	NA	NA
WP_019819476.1\|3160351_3162391_-	NADPH-dependent 2,4-dienoyl-CoA reductase	NA	NA	NA	NA
WP_019819478.1\|3162602_3163733_+	hydrolase	NA	NA	NA	NA
WP_032903443.1\|3163737_3164772_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_014718983.1\|3165138_3165930_-	DUF2242 domain-containing protein	NA	NA	NA	NA
WP_019819482.1\|3166018_3166945_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_020302358.1\|3167034_3168216_+	MFS transporter	NA	NA	NA	NA
WP_032903442.1\|3168334_3169678_+	Na+/H+ antiporter NhaA	A0A2H4J5W3	uncultured_Caudovirales_phage	6.5e-61	39.3
WP_020302360.1\|3169878_3171753_-	peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA
WP_003174819.1\|3171981_3172254_-	HU family DNA-binding protein	A3E2K9	Sodalis_phage	1.8e-18	59.6
WP_003192252.1\|3172403_3174800_-	endopeptidase La	A0A0R6PGP8	Moraxella_phage	1.2e-219	51.6
WP_003192254.1\|3174987_3176271_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	1.6e-138	59.7

DBSCAN-SWA_6

3318465 : 3357034

uncultured_Caudovirales_phage(42.22%)

tail,head,lysis,coat

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014719121.1\|3318465_3319158_-	aquaporin Z	A0A1B1ISL4	uncultured_Mediterranean_phage	5.8e-05	46.6
WP_153649787.1\|3320402_3320762_+	hypothetical protein	A0A2H4IZV2	uncultured_Caudovirales_phage	8.6e-53	91.5
WP_153649788.1\|3320742_3321270_-\|lysis	lysis protein	A0A2H4IZW4	uncultured_Caudovirales_phage	2.1e-55	70.1
WP_153649789.1\|3321269_3321695_-	cell wall hydrolase	A0A2D1GNI1	Pseudomonas_phage	9.4e-75	92.2
WP_019816795.1\|3321751_3322006_-	hypothetical protein	A0A1W6JT87	Pseudomonas_phage	7.2e-14	51.4
WP_153649790.1\|3322292_3322823_-	hypothetical protein	A0A2H4J2B7	uncultured_Caudovirales_phage	1.3e-09	29.6
WP_032903613.1\|3322851_3323499_-	hypothetical protein	A0A2H4IY64	uncultured_phage	1.9e-103	85.1
WP_153649791.1\|3323824_3327646_-	DUF1983 domain-containing protein	A0A1B0VMH5	Pseudomonas_phage	0.0e+00	74.7
WP_153649792.1\|3327705_3328299_-\|tail	tail assembly protein	A0A1B0VMI5	Pseudomonas_phage	5.3e-100	95.4
WP_153649793.1\|3328354_3328777_-	hypothetical protein	A0A1B0VMH3	Pseudomonas_phage	1.2e-66	93.6
WP_153649794.1\|3328794_3329385_-	hypothetical protein	NA	NA	NA	NA
WP_153649795.1\|3329861_3330110_+	hypothetical protein	NA	NA	NA	NA
WP_153649796.1\|3330111_3330279_-	hypothetical protein	NA	NA	NA	NA
WP_153649797.1\|3330313_3331069_-\|tail	phage tail protein	A0A2H4J1J7	uncultured_Caudovirales_phage	1.8e-137	87.6
WP_153649798.1\|3331071_3331824_-\|tail	phage minor tail protein L	A0A1B0VNE0	Pseudomonas_phage	8.1e-138	91.2
WP_058409918.1\|3331833_3332172_-\|tail	phage tail protein	A0A1B0VMG7	Pseudomonas_phage	1.1e-54	83.9
WP_153649799.1\|3332171_3335213_-\|tail	phage tail tape measure protein	A0A1B0VMG8	Pseudomonas_phage	1.5e-201	43.6
WP_153649800.1\|3335240_3335483_-	hypothetical protein	A0A2H4J4F7	uncultured_Caudovirales_phage	5.8e-21	56.0
WP_153649801.1\|3335560_3335941_-	hypothetical protein	A0A2H4IYQ5	uncultured_Caudovirales_phage	1.5e-26	49.6
WP_153649802.1\|3335943_3336615_-\|tail	phage tail protein	A0A0H5BBY3	Pseudomonas_phage	3.8e-46	44.7
WP_153649803.1\|3336683_3337103_-	hypothetical protein	A0A1B0VMI0	Pseudomonas_phage	3.4e-61	85.4
WP_153649804.1\|3337099_3337744_-	hypothetical protein	A0A1B0VMI1	Pseudomonas_phage	1.0e-88	77.0
WP_153649805.1\|3337745_3338138_-	hypothetical protein	A0A2H4IZB5	uncultured_Caudovirales_phage	3.0e-43	67.7
WP_153649806.1\|3338140_3338518_-	hypothetical protein	A0A2H4J0N2	uncultured_Caudovirales_phage	4.9e-43	75.2
WP_153649807.1\|3338528_3338834_-	hypothetical protein	A0A2H4J0G3	uncultured_Caudovirales_phage	4.6e-23	46.2
WP_153649808.1\|3338890_3339868_-\|coat	phage coat protein	A0A2H4JIE6	uncultured_Caudovirales_phage	1.8e-153	82.5
WP_153649809.1\|3339871_3340609_-	hypothetical protein	A0A2H4J0I7	uncultured_Caudovirales_phage	7.8e-93	74.4
WP_153649810.1\|3340718_3341357_-	hypothetical protein	NA	NA	NA	NA
WP_153649811.1\|3341424_3341907_-	hypothetical protein	A0A1B0VND3	Pseudomonas_phage	2.0e-20	33.5
WP_153649978.1\|3341915_3342962_-\|head	phage head morphogenesis protein	A0A2H4J3G9	uncultured_Caudovirales_phage	1.1e-132	70.7
WP_153649812.1\|3342945_3344406_-	DUF4055 domain-containing protein	A0A2H4J0H4	uncultured_Caudovirales_phage	7.1e-231	80.5
WP_153649813.1\|3344405_3345743_-	hypothetical protein	A0A2H4GY89	Pseudomonas_phage	1.9e-177	70.3
WP_153649814.1\|3346287_3346911_-	hypothetical protein	A0A1B0VRJ1	Pseudomonas_phage	7.8e-110	92.8
WP_153649815.1\|3346920_3347172_-	hypothetical protein	NA	NA	NA	NA
WP_153649816.1\|3347168_3347360_-	hypothetical protein	NA	NA	NA	NA
WP_153649817.1\|3347411_3347708_-	hypothetical protein	A0A291LAS5	Pseudomonas_phage	5.1e-11	37.8
WP_153649818.1\|3347757_3348093_-	hypothetical protein	A0A193GYR7	Enterobacter_phage	1.7e-07	36.5
WP_010211438.1\|3348089_3348428_-	hypothetical protein	A0A088FVG2	Escherichia_phage	2.0e-19	47.3
WP_153649819.1\|3349100_3349400_-	hypothetical protein	NA	NA	NA	NA
WP_153649820.1\|3349557_3350238_-	hypothetical protein	A0A2H4J9G7	uncultured_Caudovirales_phage	4.7e-84	70.9
WP_153649821.1\|3350234_3350816_-	recombination protein NinG	A0A125RNK9	Pseudomonas_phage	2.9e-74	69.6
WP_153649822.1\|3350812_3350968_-	hypothetical protein	A0A1B0VMF9	Pseudomonas_phage	4.9e-05	58.2
WP_153649823.1\|3350967_3351384_-	NinB family protein	A0A2H4J1T9	uncultured_Caudovirales_phage	1.3e-73	96.4
WP_153649824.1\|3351380_3351857_-	hypothetical protein	A0A0A0RPB2	Escherichia_phage	1.8e-18	35.0
WP_153649825.1\|3351853_3352372_-	hypothetical protein	A0A1B0VNB4	Pseudomonas_phage	2.7e-31	64.7
WP_153649826.1\|3352368_3352707_-	hypothetical protein	A0A173GBU4	Salmonella_phage	3.9e-07	61.9
WP_153649827.1\|3352703_3352892_-	DUF1382 family protein	A0A2H4J9M2	uncultured_Caudovirales_phage	4.8e-23	88.7
WP_153649828.1\|3352891_3353698_-	AAA family ATPase	A0A2H4J3E5	uncultured_Caudovirales_phage	8.2e-104	68.5
WP_153649829.1\|3353687_3354494_-	phage replication protein	A0A2H4J580	uncultured_Caudovirales_phage	3.3e-68	54.2
WP_153649830.1\|3354493_3355351_-	Rha family transcriptional regulator	A0A2H4J111	uncultured_Caudovirales_phage	5.8e-55	70.1
WP_153649831.1\|3355420_3356035_-	hypothetical protein	NA	NA	NA	NA
WP_153649832.1\|3356085_3356265_-	Cro/Cl family transcriptional regulator	R9TPV3	Vibrio_phage	4.3e-05	46.9
WP_153649833.1\|3356374_3357034_+	helix-turn-helix domain-containing protein	K7PM82	Enterobacteria_phage	3.3e-42	49.2

DBSCAN-SWA_7

3361480 : 3372348

uncultured_Caudovirales_phage(36.36%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_153649840.1\|3361480_3362005_+	hypothetical protein	A0A2I7R165	Vibrio_phage	2.0e-05	27.7
WP_153649841.1\|3362110_3362422_+	hypothetical protein	A0A2H4J404	uncultured_Caudovirales_phage	1.9e-24	74.7
WP_034097476.1\|3362399_3362636_+	hypothetical protein	NA	NA	NA	NA
WP_090403828.1\|3362625_3362853_+	hypothetical protein	NA	NA	NA	NA
WP_034097471.1\|3362955_3364071_+	hypothetical protein	NA	NA	NA	NA
WP_034097470.1\|3364124_3365090_+	recombinase RecT	A0A193GYL3	Enterobacter_phage	1.7e-71	57.3
WP_034097469.1\|3365089_3365752_+	exonuclease	A0A0U2BXF3	Paracoccus_phage	3.8e-30	37.8
WP_153649842.1\|3365754_3365997_+	hypothetical protein	A0A2H4J1H1	uncultured_Caudovirales_phage	8.1e-31	88.8
WP_153649843.1\|3365993_3366464_+	hypothetical protein	A0A2H4J101	uncultured_Caudovirales_phage	3.4e-73	88.7
WP_153649844.1\|3366533_3366845_+	hypothetical protein	A0A2H4JAQ1	uncultured_Caudovirales_phage	2.7e-10	43.7
WP_153649845.1\|3366902_3367115_-	hypothetical protein	NA	NA	NA	NA
WP_153649846.1\|3367490_3367979_+	HNH endonuclease	W6MVN6	Pseudomonas_phage	7.6e-28	45.1
WP_153649847.1\|3367985_3370034_+	DNA cytosine methyltransferase	Q5QF27	Pseudomonas_virus	2.8e-217	57.5
WP_153649848.1\|3370030_3370315_-	hypothetical protein	NA	NA	NA	NA
WP_153649849.1\|3370445_3370748_+	DUF4406 domain-containing protein	A0A2K8I958	Pseudomonas_phage	6.8e-19	49.0
WP_153649850.1\|3370748_3371396_-	hypothetical protein	NA	NA	NA	NA
WP_153649851.1\|3371487_3372348_+	hypothetical protein	Q5QF30	Pseudomonas_virus	2.7e-36	43.0

DBSCAN-SWA_8

4917359 : 4966712

Tupanvirus(20.0%)

protease,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014720226.1\|4917359_4917860_-\|protease	ATP-dependent zinc protease	NA	NA	NA	NA
WP_014720227.1\|4918031_4918928_+	acyltransferase	NA	NA	NA	NA
WP_130175537.1\|4918961_4919240_-	hypothetical protein	NA	NA	NA	NA
WP_020302147.1\|4919413_4919986_-	DUF2780 domain-containing protein	NA	NA	NA	NA
WP_019817428.1\|4920122_4920581_+	hypothetical protein	NA	NA	NA	NA
WP_014720230.1\|4920776_4921976_-	formaldehyde dehydrogenase, glutathione-independent	A0A2K9L7I1	Tupanvirus	1.1e-11	29.7
WP_014720231.1\|4922159_4923017_-	formyltetrahydrofolate deformylase	NA	NA	NA	NA
WP_014720232.1\|4923142_4923775_-	sarcosine oxidase subunit gamma family protein	NA	NA	NA	NA
WP_019817431.1\|4923911_4926929_-	sarcosine oxidase subunit alpha	NA	NA	NA	NA
WP_003194855.1\|4926925_4927228_-	sarcosine oxidase subunit delta	NA	NA	NA	NA
WP_003176546.1\|4927243_4928494_-	sarcosine oxidase subunit beta	NA	NA	NA	NA
WP_017738444.1\|4928516_4929770_-	serine hydroxymethyltransferase	A0A240F3L3	Aeromonas_phage	1.7e-100	52.7
WP_014720234.1\|4930006_4930735_-	conjugal transfer protein TraX	NA	NA	NA	NA
WP_014720235.1\|4930825_4931866_+	low specificity L-threonine aldolase	NA	NA	NA	NA
WP_014720236.1\|4932059_4932260_+	hypothetical protein	NA	NA	NA	NA
WP_020302143.1\|4932391_4932925_+	hypothetical protein	NA	NA	NA	NA
WP_014720237.1\|4933681_4934782_-	glycine-betaine demethylase subunit GbcB	NA	NA	NA	NA
WP_032902310.1\|4935064_4936360_+	glycine-betaine demethylase subunit GbcA	NA	NA	NA	NA
WP_032902342.1\|4937208_4937979_-	electron transfer flavoprotein subunit beta	NA	NA	NA	NA
WP_014720242.1\|4937989_4939210_-	electron transfer flavoprotein subunit alpha/FixB family protein	NA	NA	NA	NA
WP_019817451.1\|4939209_4941153_-	dimethylglycine demethylation protein DgcB	NA	NA	NA	NA
WP_003194876.1\|4941290_4943351_-	dimethylglycine demethylation protein DgcA	NA	NA	NA	NA
WP_008033249.1\|4943366_4943897_-	hypothetical protein	NA	NA	NA	NA
WP_032879065.1\|4943975_4944953_-	membrane dipeptidase	NA	NA	NA	NA
WP_014720247.1\|4945171_4945573_+	DUF1311 domain-containing protein	NA	NA	NA	NA
WP_014720249.1\|4946768_4947185_+	DUF3010 family protein	NA	NA	NA	NA
WP_014720250.1\|4947216_4948395_-	ATP-binding protein	NA	NA	NA	NA
WP_032902306.1\|4948463_4949408_-	GlxA family transcriptional regulator	NA	NA	NA	NA
WP_032902304.1\|4949603_4950548_+\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_032902302.1\|4950636_4951524_+	3-keto-5-aminohexanoate cleavage protein	NA	NA	NA	NA
WP_014720254.1\|4951599_4952565_+	L-carnitine dehydrogenase	NA	NA	NA	NA
WP_014720255.1\|4952667_4953162_+	4-hydroxybenzoyl-CoA thioesterase	NA	NA	NA	NA
WP_014720256.1\|4953385_4953649_+	hypothetical protein	NA	NA	NA	NA
WP_003194907.1\|4953736_4954840_-	GlxA family transcriptional regulator	NA	NA	NA	NA
WP_014720257.1\|4955365_4956742_-	L-serine ammonia-lyase	NA	NA	NA	NA
WP_019817457.1\|4957158_4958106_+\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003194913.1\|4958175_4959021_+\|holin	choline ABC transporter permease subunit	NA	NA	NA	NA
WP_014720259.1\|4959017_4960196_+\|holin	choline ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	3.5e-26	36.8
WP_014720260.1\|4960353_4962345_-	BCCT family transporter	A0A2I7QNT1	Vibrio_phage	1.5e-18	26.4
WP_003194919.1\|4962677_4963271_+	transcriptional regulator BetI	NA	NA	NA	NA
WP_014720261.1\|4963381_4964854_+	betaine-aldehyde dehydrogenase	NA	NA	NA	NA
WP_014720262.1\|4965008_4966712_+\|holin	choline dehydrogenase	A0A1V0SI18	Klosneuvirus	2.9e-50	30.3

DBSCAN-SWA_9

5029351 : 5039844

Bacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032902285.1\|5029351_5029591_-	hypothetical protein	B5TK57	Pseudomonas_phage	9.2e-11	57.6
WP_032902283.1\|5030027_5030315_+	HigA family addiction module antidote protein	A0A0M3LPV0	Mannheimia_phage	1.1e-18	51.7
WP_003195048.1\|5030451_5030907_-	chemotaxis protein CheW	NA	NA	NA	NA
WP_032902281.1\|5030899_5036719_-	response regulator	W8CYM9	Bacillus_phage	3.7e-12	35.9
WP_020301916.1\|5036894_5038946_-	type IV pilus biogenesis protein	A0A2H4J162	uncultured_Caudovirales_phage	9.3e-19	40.3
WP_020301917.1\|5038942_5039467_-	type IV pili signal transduction protein/twitching mobility protein	Q56AR1	Bacillus_thuringiensis_phage	5.1e-06	35.1
WP_014720320.1\|5039478_5039844_-	response regulator	W8CYM9	Bacillus_phage	1.1e-12	33.3

DBSCAN-SWA_10

5669952 : 5680731

Pseudomonas_phage(83.33%)

integrase,tail

attL 5661199:5661214|attR 5682562:5682577

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
5661199:5661214	attL	NA	NA	NA	NA
WP_153649915.1\|5669952_5670537_-\|tail	tail assembly protein	A0A2H4J1H0	uncultured_Caudovirales_phage	2.2e-58	64.9
WP_010214208.1\|5670533_5671112_-\|tail	tail assembly protein	A0A1B0VMI5	Pseudomonas_phage	3.9e-71	71.2
WP_153649916.1\|5671120_5671501_-	hypothetical protein	A0A1B0VML3	Pseudomonas_phage	5.2e-32	54.5
WP_153649917.1\|5671607_5672216_-	hypothetical protein	A0A1B0VMK2	Pseudomonas_phage	4.0e-103	94.5
WP_153649918.1\|5672212_5672521_-	hypothetical protein	A0A1B0VML7	Pseudomonas_phage	2.0e-42	82.4
WP_153649919.1\|5672517_5672880_-	hypothetical protein	NA	NA	NA	NA
WP_061434832.1\|5672876_5674670_-	DUF927 domain-containing protein	A0A1B0VP75	Pseudomonas_phage	0.0e+00	92.2
WP_153649920.1\|5674656_5675538_-	toprim domain-containing protein	A0A1B0VML8	Pseudomonas_phage	1.5e-146	92.8
WP_153649921.1\|5675534_5675762_-	hypothetical protein	A0A1B0VRK9	Pseudomonas_phage	1.4e-32	92.0
WP_153649922.1\|5675754_5676042_-	hypothetical protein	A0A1B0VMJ4	Pseudomonas_phage	1.4e-42	93.3
WP_153649923.1\|5676142_5676652_-	hypothetical protein	NA	NA	NA	NA
WP_153649924.1\|5676648_5676912_-	hypothetical protein	A0A1B0VMJ2	Pseudomonas_phage	4.0e-23	69.9
WP_153649925.1\|5677384_5677858_-	hypothetical protein	A0A1B0VMK9	Pseudomonas_phage	5.8e-65	80.8
WP_092278013.1\|5677854_5678154_-	hypothetical protein	NA	NA	NA	NA
WP_094774316.1\|5678153_5678423_-	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_010214186.1\|5678583_5679336_-	hypothetical protein	NA	NA	NA	NA
WP_153649926.1\|5679495_5680731_-\|integrase	tyrosine-type recombinase/integrase	A0A2H4JAT5	uncultured_Caudovirales_phage	7.7e-77	42.3
5682562:5682577	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP045767

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CRISPR-Cas detection and classification

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Click the colored protein region to show detailed information

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection