CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP045755	Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000752 plasmid p1CFSAN000752, complete sequence	0 crisprs	NA	0	1
NZ_CP045754	Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000752 chromosome, complete genome	2 crisprs	DinG,DEDDh,cas3,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,WYL,PD-DExK,cas14j	11	4
NZ_CP045756	Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000752 plasmid p2CFSAN000752, complete sequence	0 crisprs	RT	0	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

44460 : 56152

Rhodococcus_phage(12.5%)

integrase,transposase

attL 38266:38279|attR 56186:56199

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
38266:38279	attL	NA	NA	NA	NA
WP_020833575.1\|44460_44967_-	antirestriction protein	A0A1I9S7Y0	Rhodococcus_phage	1.1e-08	28.9
WP_020833576.1\|45372_46152_-	hypothetical protein	NA	NA	NA	NA
WP_020833577.1\|46206_46626_-	DUF1380 domain-containing protein	NA	NA	NA	NA
WP_020833578.1\|46636_46858_-	hypothetical protein	NA	NA	NA	NA
WP_020833579.1\|46857_47535_-	DNA methylase	A0A2I7RE86	Vibrio_phage	1.5e-29	37.4
WP_020833580.1\|47894_48566_+	hypothetical protein	A0A2H4J5W2	uncultured_Caudovirales_phage	8.2e-81	61.3
WP_020833581.1\|49168_50443_+	Y-family DNA polymerase	F1C5A5	Cronobacter_phage	1.3e-156	64.5
WP_077909669.1\|50524_51502_-	ParB/RepB/Spo0J family partition protein	A0A1B0V750	Salmonella_phage	1.1e-83	53.2
WP_000427674.1\|51498_52704_-	ParA family protein	A0A077SL49	Escherichia_phage	1.4e-163	69.6
WP_001749329.1\|53392_53647_-	hypothetical protein	NA	NA	NA	NA
WP_000728920.1\|54277_55219_+\|transposase	Rpn family recombination-promoting nuclease/putative transposase	Q2A0A7	Sodalis_phage	1.4e-73	55.0
WP_020833584.1\|55369_56152_-\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	1.7e-50	90.2
56186:56199	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP045754

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP045754_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045754_1

1390862-1391501

TypeI-E

I-E

Consensus_repeat	Method
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRISPRCasFinder
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	PILER-CR

10 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NZ_CP045754_1

>merge|NZ_CP045754|1|1390862-1391501|CRISPRCasFinder,CRT,PILER-CR
GTGTTTATCCCCGCTGACGCGGGGAACACAGCTGAACAAACGTCAGGCGGGTGTACCAGTTCGGTTTCTCCCGGCTGACGCGGGGAACACGAGCTGGCGAACCTGATGGCGGGCGACGTGGACGGTTTATCCCCGCTGACGCGGGGAACACCCTGAATACTCGCAGCGATTTGCGCGATCTGGCGGTTTATCCCCGCTGGCGCGGGGAACACTTTTGTCCTGAATAGAAGCGTCACAAGAAACTCGGTTTATCCCCGCTGGCGCGGGGAACACGCAGGCGGAATCGGTATTTATCCGACGTTCACACGGTTTATCCCCGCTGGCGCGGGGAACACGTTGCTTGCCGCTGCTCAAGGAGTTTATTTCCCGGTTTATCCCCGCTGGCGCGGGGAACACTTGATAATCGCCAGCTTGACCAGTTTGGCATCCGGTTTATCCCCGCTGGCGCGGGGAACACGGCCTGCAAACAGCACGCGAGCTGATAGTAAGCGGTTTATCCCCGCTGGCGCGGGGAACACATCCGGCGATGCAAGCGCAAGCGGGAAACAATCGGTTTATCCCCGCTGGCGCGGGGAACACGTAAATATCCAGATATATGGACGCCAATTATACGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP045754|1|1|1390862-1391501|CRISPRCasFinder
GTGTTTATCCCCGCTGACGCGGGGAACAC	AGCTGAACAAACGTCAGGCGGGTGTACCAGTT
CGGTTTCTCCCGGCTGACGCGGGGAACAC	GAGCTGGCGAACCTGATGGCGGGCGACGTGGA
CGGTTTATCCCCGCTGACGCGGGGAACAC	CCTGAATACTCGCAGCGATTTGCGCGATCTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTTTGTCCTGAATAGAAGCGTCACAAGAAACT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCAGGCGGAATCGGTATTTATCCGACGTTCACA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTGCTTGCCGCTGCTCAAGGAGTTTATTTCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTGATAATCGCCAGCTTGACCAGTTTGGCATC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGCCTGCAAACAGCACGCGAGCTGATAGTAAG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATCCGGCGATGCAAGCGCAAGCGGGAAACAAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTAAATATCCAGATATATGGACGCCAATTATA
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP045754|1|1|1390862-1391501|CRT
GTGTTTATCCCCGCTGACGCGGGGAACAC	AGCTGAACAAACGTCAGGCGGGTGTACCAGTT
CGGTTTCTCCCGGCTGACGCGGGGAACAC	GAGCTGGCGAACCTGATGGCGGGCGACGTGGA
CGGTTTATCCCCGCTGACGCGGGGAACAC	CCTGAATACTCGCAGCGATTTGCGCGATCTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTTTGTCCTGAATAGAAGCGTCACAAGAAACT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCAGGCGGAATCGGTATTTATCCGACGTTCACA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTGCTTGCCGCTGCTCAAGGAGTTTATTTCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTGATAATCGCCAGCTTGACCAGTTTGGCATC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGCCTGCAAACAGCACGCGAGCTGATAGTAAG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATCCGGCGATGCAAGCGCAAGCGGGAAACAAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTAAATATCCAGATATATGGACGCCAATTATA
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP045754|1|1|1390984-1391501|PILER-CR
CGGTTTATCCCCGCTGACGCGGGGAACAC	CCTGAATACTCGCAGCGATTTGCGCGATCTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTTTGTCCTGAATAGAAGCGTCACAAGAAACT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GCAGGCGGAATCGGTATTTATCCGACGTTCACA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTTGCTTGCCGCTGCTCAAGGAGTTTATTTCC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TTGATAATCGCCAGCTTGACCAGTTTGGCATC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GGCCTGCAAACAGCACGCGAGCTGATAGTAAG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	ATCCGGCGATGCAAGCGCAAGCGGGAAACAAT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	GTAAATATCCAGATATATGGACGCCAATTATA
CGGTTTATCCCCGCTGGCGCGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045754.1\|WP_020839113.1\|1395268_1395817_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP045754.1\|WP_001518648.1\|1391597_1391891_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_CP045754.1\|WP_001645986.1\|1401532_1402267_-\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP045754.1\|WP_020839117.1\|1386600_1387206_-\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NZ_CP045754.1\|WP_000372384.1\|1388641_1389550_-\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP045754.1\|WP_020839116.1\|1391890_1392811_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP045754.1\|WP_020839110.1\|1400491_1401445_+\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
NZ_CP045754.1\|WP_020839118.1\|1384995_1385706_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NZ_CP045754.1\|WP_020839115.1\|1392807_1393458_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
NZ_CP045754.1\|WP_020839111.1\|1397384_1400048_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP045754.1\|WP_001092269.1\|1387192_1388632_-\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP045754.1\|WP_001591403.1\|1394196_1395255_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP045754.1\|WP_001219245.1\|1384516_1384996_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
NZ_CP045754.1\|WP_020839112.1\|1395813_1397373_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_CP045754.1\|WP_000517480.1\|1385724_1386036_-\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
NZ_CP045754.1\|WP_001118109.1\|1386226_1386583_-\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
NZ_CP045754.1\|WP_020839114.1\|1393439_1394186_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NZ_CP045754.1\|WP_001221538.1\|1382728_1383490_-\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NZ_CP045754.1\|WP_000134246.1\|1383470_1384520_-\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NZ_CP045754.1\|WP_000490481.1\|1389800_1390847_+\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299

Protein	Function_ID	Function_description	E-value
NZ_CP045754.1\|WP_020839113.1\|1395268_1395817_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	5.28868e-33
NZ_CP045754.1\|WP_001518648.1\|1391597_1391891_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	1.1867e-62
NZ_CP045754.1\|WP_001645986.1\|1401532_1402267_-\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	1.50033e-138
NZ_CP045754.1\|WP_020839117.1\|1386600_1387206_-\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	4.56869e-145
NZ_CP045754.1\|WP_000372384.1\|1388641_1389550_-\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP045754.1\|WP_020839116.1\|1391890_1392811_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	1.39311e-157
NZ_CP045754.1\|WP_020839110.1\|1400491_1401445_+\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
NZ_CP045754.1\|WP_020839118.1\|1384995_1385706_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	1.27466e-119
NZ_CP045754.1\|WP_020839115.1\|1392807_1393458_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	7.28128e-76
NZ_CP045754.1\|WP_020839111.1\|1397384_1400048_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	0
NZ_CP045754.1\|WP_001092269.1\|1387192_1388632_-\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP045754.1\|WP_001591403.1\|1394196_1395255_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	1.5515e-136
NZ_CP045754.1\|WP_001219245.1\|1384516_1384996_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	3.20925e-104
NZ_CP045754.1\|WP_020839112.1\|1395813_1397373_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	1.08811e-170
NZ_CP045754.1\|WP_000517480.1\|1385724_1386036_-\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	1.08865e-64
NZ_CP045754.1\|WP_001118109.1\|1386226_1386583_-\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	4.85353e-49
NZ_CP045754.1\|WP_020839114.1\|1393439_1394186_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	2.10155e-49
NZ_CP045754.1\|WP_001221538.1\|1382728_1383490_-\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.7078e-146
NZ_CP045754.1\|WP_000134246.1\|1383470_1384520_-\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NZ_CP045754.1\|WP_000490481.1\|1389800_1390847_+\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0

>NZ_CP045754.1|WP_000490481.1|1389800_1390847_+|aminopeptidase
MFSATRRFAVILALGVGFILPAQAASPGPGEIANTQARHIATFFPGRMTGSPAEMLSADYLRQQFTQMGYQSDIRTFNSRFIYTTKDNRKNWHNVTGSTVIAAHEGRVPQQIIIMAHLDTYAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAARLKDIPTHYGIRFIATSGEEEGKLGAENLLKRMSDAEKKNTLLVINLDNLIVGDKLYFNSGKNTPEAVRTLTRDRALAIARRYGIAANTNPGRNPSYPKGTGCCNDAEVFDKAGISVLSVEATNWNLGKKDGYQQRVKNASFPNGNSWHDVRLDNQQHIDKALPGRIERRSRDVVRIMLPLVKELAKAEKTS
>NZ_CP045754.1|WP_000372384.1|1388641_1389550_-|sulfate-adenylyltransferase-subunit-CysD
MDQKRLTHLRQLEAESIHIIREVAAEFANPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYAFRDRTANAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWRNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMVDDDRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESHAQTLPEIIEEMLVSTTSERQGRMIDRDQAGSMELKKRQGYF
>NZ_CP045754.1|WP_001092269.1|1387192_1388632_-|sulfate-adenylyltransferase-subunit-CysN
MNTILAQQIANEGGVEAWMMAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTLQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCDLAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYREETFARIREDYLTFAEQLPGDLDIRFVPLSALEGDNVAAQSANMRWYSGPTLLEVLETVDIQRAVDRQPMRFPVQYVNRPNLDFRGYAGTLASGSVKVGERIKVLPSGVESSVARIVTFDGDKEEACAGEAITLVLNDDIDISRGDLLLAANETLAPARHAAIDVVWMAEQPLAPGQSYDVKLAGKKTRARIEAIRYQIDINNLTQRDVESLPLNGIGLVEMTFDEPLALDIYQQNPVTGGLIFIDRLSNVTVGAGMVRELDERGATPPVEYSAFELELNALVRRHFPHWDARDLLGDKHGAA
>NZ_CP045754.1|WP_020839117.1|1386600_1387206_-|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVAAREQLHGHRGVVLWFTGLSGSGKSTVAGALEEALHQRGVSTYLLDGDNVRHGLCRDLGFSDADRQENIRRVGEVASLMADAGLIVLTAFISPHRAERQLVKERVGHDRFIEIYVNTPLAICEQRDPKGLYKKARAGELRNFTGIDAIYEAPDSPLVHLNGEQLVTNLVSQLLDLLRRRDIIRS
>NZ_CP045754.1|WP_001118109.1|1386226_1386583_-|DUF3561-family-protein
MPGMVKVTGFNMRNSHNITFTRSDAFMVDDDATSAFPGAVVGFVSWLLALGIPFLLYGPNTLFFFLYTWPFFLALMPVSVIIGIALHLLVKGKILFSIMFTLLAVGALFGALFIWLLG
>NZ_CP045754.1|WP_000517480.1|1385724_1386036_-|cell-division-protein-FtsB
MGKLTLLLLALLVWLQYSLWFGKNGIHDYSRVNDDVVAQQATNAKLKARNDQLFAEIDDLNGGQEAIEERARNELSMTKPGETFYRLVPDASKRAATAGQTHR
>NZ_CP045754.1|WP_020839118.1|1384995_1385706_-|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MAATLLDVCAVVPAAGFGRRMQTECPKQYLSIGNKTILEHSVHALLAHPRVTRVVIAISPGDHRFAQLPLANHPQITVVDGGNERADSVLAGLQAVAEAQWVLVHDAARPCLHQDDLARLLAISENSRVGGILASPVRDTMKRGEPGKNAIAHTVERADLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPALVEGRADNIKVTRPEDLALAEFYLTRTIHQEKA
>NZ_CP045754.1|WP_001219245.1|1384516_1384996_-|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDEVNVKATTTEKLGFTGRGEGIACEAVALLMKAAK
>NZ_CP045754.1|WP_000134246.1|1383470_1384520_-|tRNA-pseudouridine(13)-synthase-TruD
MTEFDNLTWLHGKPQGSGLLKANPEDFVVVEDLGFTPDGEGEHILLRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDFSAFQLEGCKVLEYARHKRKLRLGALKGNAFTLVLREISDRRDVETRLQAIRDGGVPNYFGAQRFGIGGSNLQGALRWAQSNAPVRDRNKRSFWLSAARSALFNQIVHQRLKKPDFNQVVDGDALQLAGRGSWFVATSEELPELQRRVDEKELMITASLPGSGEWGTQRAALAFEQDAIAQETVLQSLLLREKVEASRRAMLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAHIAE
>NZ_CP045754.1|WP_001221538.1|1382728_1383490_-|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFDNGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLNGYQHYDTAAAVTCALLRGLSREPLRTGRILNVNVPDLPLAQVKGIRVTRCGSRHPADKVIPQEDPRGNTLYWIGPPGDKYDAGPDTDFAAVDEGYVSVTPLHVDLTAHSAHDVVSDWLDSVGVGTQW
>NZ_CP045754.1|WP_001518648.1|1391597_1391891_-|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMVVVVTENVPPRLRGRLAVWLLEVRAGVYVGDTSKRIREMIWQQITQLGGVGNVVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVENQ
>NZ_CP045754.1|WP_020839116.1|1391890_1392811_-|type-I-E-CRISPR-associated-endonuclease-Cas1
MTFVPLNPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVHLASTVGTLLVWVGEAGVRVYSSGQPGGARADKLLYQAKLALDDDLRLKVVRKMYELRFREPPPARRSVEQLRGIEGSRVRATYALLAKQYGVKWHGRNYDPKDWEKGDVVNRCISAATSCLYGISEAAILAAGYAPAIGFIHSGKPLSFVYDIADIIKFESVVPKAFEIAARHPAEPDKEVRLACRDIFRSSKLTGKLIPLIEEVLAAGEIKPPQPAPDMLPPAIPEPESLGDSGHRGHG
>NZ_CP045754.1|WP_020839115.1|1392807_1393458_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRITLHTSELSPAQLLHLVERGEYVMHQWLWDLFPGGKERQFLYRREELQGAFRFFVLSQEQPAASAIFDVQTRPFAPMLSAGQTLRFNLRANPTVCKNGKRHDLLMEAKRQRKTQGDSQDIWSYQQQAALTWLARQGEQNGFTLRETSVDAYRQQQIRRGKDRQMIQFSSVDYTGVLVINEPALFLQRLAQGYGKSRAFGCGMMMIKPGDDA
>NZ_CP045754.1|WP_020839114.1|1393439_1394186_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MSQYLVFQLHGPMASWGVDAPGEVRHSHDLPSRSALLGLLAAALGIRRDEEERLNAFNRHYQFLLCASGNPRWARDYHTVQMPKEVRKARYFSRREELQDPELLSALISRRDYYTDAWWMIAVSATPDAPYTLAQLQAALQHPVFPLYLGRKSHPLALPLAPQLLEGSAADVLREAYRWYQDQFNALKLPLPGLQNECWWEGEHDGLTANKILRRRDMPLSRQQWLFGERSVNQGPWLRKEDACISQE
>NZ_CP045754.1|WP_001591403.1|1394196_1395255_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRISSQSLKRAWRTSELFEQALAGNIGIRSGRIAREAAQILIESGIDAKKAVEYVKNIANYFGKVKAEKKPKDELTNAETGQLVHISPAEFEGVKALAHRLAEEKRAPKEEELALLRKDRMAVDIAMFGRMLAEKTDFNVEAACQVAHAFGVSETIVEDDFFTAVDDLRQASAEDAGAGHLGETGFGSALFYTYICINKDLLVKNLNDNEELANKTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTDQLNVAVKRITSLHKNMNKVYGQRTDTASFDVMNQQGSMKDVLDFICA
>NZ_CP045754.1|WP_020839113.1|1395268_1395817_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSIVQEDHKATLRKWHEDLQEKRGARASLRRSKTVNEACLSEGFHLLLMQTHSLWKNKADWHVTALAITAILAAHIKFIDERQSFATQLGQKKSGDNPVMSKLRFSRLSAVKNPDELLRHLRRAVQLLDGSVNLISLADDIFRWCQEQDDLLNHHRRQQRPTEFLRIRWALEYYQAGDNEQD
>NZ_CP045754.1|WP_020839112.1|1395813_1397373_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDNFSLLTTLWLPVRFKDGSTGKLAPVNLADENVVDIAATRADLQGAAWQFLLGLLQCSIAPKRYKNWEDIWFDGLHADALHKALAQLEHAFQFGAETPSFMQDFEELPDNKITIASLLPETPGIQTTELNTDHFIKRGVMECFCPHCAALALFSMQLNAPSGGQGYRTGLRGGGPLTTLIELQEYQGERQTPLWRKLWLNVMPQDAADLPLPVVYDAAVFPWLAATRTSEPPAHTITTDEQVNKLQAYWGMPRRIRLDFATIRQGVCNICGNNSDELLIQMLVKNYGVNYDRWRHPLTPHRLQIKNSKGFEPVITQPGGLLWRDWLGLSQENPTEKNTEYPAQVIKVFNARELRNIKVGLWGFGADFKKMKIRCWYEHHFPLLMTEGLIPDLRKATQTATRLLSLLRSALKEAWFANAKGARGDFSFIDIDFWNLTQGRFLNLIHDLENGHKPDERLNKWQRELWLFTRCYFDDHVFTNPYESSDLERIMKARKKYFTSSAEKQSAKAAKAKKQEAAE
>NZ_CP045754.1|WP_020839111.1|1397384_1400048_-|CRISPR-associated-helicase/endonuclease-Cas3
MSIYHYWGKSRRGETNGGDDYHLLCWHSLDVAAVGYWMVINNIYFIDHYLKKLGIQDKEQAAQFFAWILCWHDIGKFAHSFQQLYRHEALNIFNEPTRHYEKIAHTTLGYVLWNSWLSECPELFPPSSLSVRKSKRVMALWMPVTTGHHGRPPEAIQELDHFRQQDKDAARDFLLRIKALFPLITLPEAWDEDEGIDQFQQLSWFISAAVVLADWTGSASRYFPRTAEKMPVDTYWQQALAKAQTAITLFPSAANVSAFTGIETLFPFIQHPTPLQQKALELDINVDGAQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLYFGLPTMATANAMFERMANTWLALYQPDSRPSLILAHSARRLMDRFNQSIWSVTLSGTEEPDEAQPYSQGCAAWFADSNKKALLAEVGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAWMSRILEGLIERQASNGNATILLSATLSQQQRDKLVAAFSRGVRRSVQAPLLGHDDYPWLTQVTQTELISQRVDTRKEVERCVDIGWLHSEEACLERIGEAVEKGNCIAWIRNSVDDAIRIYRQLQLSKVVATENLLLFHSRFAFHDRQRIESQTLNLFGKQSGAQRAGKVIIATQVIEQSLDIDCDEMISDLAPVDLLIQRAGRLQRHIRDRNGLVKKSGQDERETPVLRILAPEWDDAPRENWLSSAMRNSAYVYPDHGRMWLTQRILREQGTIRMPQSARLLIESVYGEDVNMPVGFAKTEQLQEGKVHCDRAFAYQMLLNFAPGYCAEISDSLPEKMSTRLAEESVTLWLAKIVDGVVTPYASGEHAWEMSVLRVRQSWWNKHKDEFEKLDGEPLRKWCAQQHQDKDFATVIVVTDCAACGYSANEGLIGMMGE
>NZ_CP045754.1|WP_020839110.1|1400491_1401445_+|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMDVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGSKMTWHPELLQESISTLRKEVTGNAQIKTAVYEMMRPAEAPDHPLVEWQDSLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFSEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLT
>NZ_CP045754.1|WP_001645986.1|1401532_1402267_-|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVLALAETNAQLETLTAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG

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Crispr_ID: NZ_CP045754_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045754_2

1407623-1408323

TypeI-E

I-E

Consensus_repeat	Method
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRISPRCasFinder
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CRT
CGGTTTATCCCCGCTGGCGCGGGGAACAC	PILER-CR

11 spacers

cas3,cas8e,cse2gr11,cas7

The CRISPR arrays of NZ_CP045754_2

>merge|NZ_CP045754|2|1407623-1408323|CRISPRCasFinder,CRT,PILER-CR
ACGGCTATCCTTGTTGGCGCGGGGAACACATCTTCATATTGCGTGACGCTGCCGATGAACGCGGTTTATCCCCGCTGGCGCGGGGAACACTCTTTATCAGCTAACCATTTCCAGAACTCGTCCGGTTTATCCCCGCTGGCGCGGGGAACACTGCCCGTTCTGCCTCTTCGCACTCTCGATCAACGGTTTATCCCCGCTGGCGCGGGGAACACTGCGTAATGGGCTACCTGAACTTCACATATCCCGGTTTATCCCCGCTAGCGCGGGGAACATATTAAGCGCGCAAAGTTTGGGTTAATTGGACACGGTTTATCCCCGCTGGCGCGGGGAACACCGTATTCGTCACACAGCCCCGTCCAGAAATGACGGTTTATCCCCGCTGGCACGGGGAACACTAACGAACTGAATAAAATGTCAGAAAGTGACGCGGCTTATCCCCGCTGGCGCGGGGAACACGCAGCTTAGCGACGAAATTAAAACCGAACTCACCGGTTTATCCCCGCTGGCGCGGGGAACACTGCCAGTGACTACAGAAGCGTCGCTATCGGGGCGGTTTATCCCCGCTGGCGCGGGGAACACTGCTCAATAACGTCGTAAATAGCGTAAGCTGGCGGTTTATCCCCGCTGGCGCGGGGAACACTATTTCGCCTTCGGCACTGACGTCACCGTCAACGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP045754|2|2|1407623-1408323|CRISPRCasFinder
ACGGCTATCCTTGTTGGCGCGGGGAACAC	ATCTTCATATTGCGTGACGCTGCCGATGAACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTTATCAGCTAACCATTTCCAGAACTCGTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCCCGTTCTGCCTCTTCGCACTCTCGATCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCGTAATGGGCTACCTGAACTTCACATATCC
CGGTTTATCCCCGCTAGCGCGGGGAACAT	ATTAAGCGCGCAAAGTTTGGGTTAATTGGACA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGTATTCGTCACACAGCCCCGTCCAGAAATGA
CGGTTTATCCCCGCTGGCACGGGGAACAC	TAACGAACTGAATAAAATGTCAGAAAGTGACG
CGGCTTATCCCCGCTGGCGCGGGGAACAC	GCAGCTTAGCGACGAAATTAAAACCGAACTCAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCCAGTGACTACAGAAGCGTCGCTATCGGGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCTCAATAACGTCGTAAATAGCGTAAGCTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TATTTCGCCTTCGGCACTGACGTCACCGTCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP045754|2|2|1407623-1408323|CRT
ACGGCTATCCTTGTTGGCGCGGGGAACAC	ATCTTCATATTGCGTGACGCTGCCGATGAACG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTTATCAGCTAACCATTTCCAGAACTCGTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCCCGTTCTGCCTCTTCGCACTCTCGATCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCGTAATGGGCTACCTGAACTTCACATATCC
CGGTTTATCCCCGCTAGCGCGGGGAACAT	ATTAAGCGCGCAAAGTTTGGGTTAATTGGACA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGTATTCGTCACACAGCCCCGTCCAGAAATGA
CGGTTTATCCCCGCTGGCACGGGGAACAC	TAACGAACTGAATAAAATGTCAGAAAGTGACG
CGGCTTATCCCCGCTGGCGCGGGGAACAC	GCAGCTTAGCGACGAAATTAAAACCGAACTCAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCCAGTGACTACAGAAGCGTCGCTATCGGGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCTCAATAACGTCGTAAATAGCGTAAGCTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TATTTCGCCTTCGGCACTGACGTCACCGTCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP045754|2|2|1407684-1408323|PILER-CR
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TCTTTATCAGCTAACCATTTCCAGAACTCGTC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCCCGTTCTGCCTCTTCGCACTCTCGATCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCGTAATGGGCTACCTGAACTTCACATATCC
CGGTTTATCCCCGCTAGCGCGGGGAACAT	ATTAAGCGCGCAAAGTTTGGGTTAATTGGACA
CGGTTTATCCCCGCTGGCGCGGGGAACAC	CGTATTCGTCACACAGCCCCGTCCAGAAATGA
CGGTTTATCCCCGCTGGCACGGGGAACAC	TAACGAACTGAATAAAATGTCAGAAAGTGACG
CGGCTTATCCCCGCTGGCGCGGGGAACAC	GCAGCTTAGCGACGAAATTAAAACCGAACTCAC
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCCAGTGACTACAGAAGCGTCGCTATCGGGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TGCTCAATAACGTCGTAAATAGCGTAAGCTGG
CGGTTTATCCCCGCTGGCGCGGGGAACAC	TATTTCGCCTTCGGCACTGACGTCACCGTCAA
CGGTTTATCCCCGCTGGCGCGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045754.1\|WP_020839113.1\|1395268_1395817_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP045754.1\|WP_000210451.1\|1412672_1413473_-\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NZ_CP045754.1\|WP_001645986.1\|1401532_1402267_-\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP045754.1\|WP_001079648.1\|1419241_1419778_+\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185168
NZ_CP045754.1\|WP_000108313.1\|1406277_1406640_+\|6-carboxytetrahydropterin-synthase-QueD	unknown	unknown	gnl\|CDD\|238264
NZ_CP045754.1\|WP_020839108.1\|1404054_1405854_-\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|182862
NZ_CP045754.1\|WP_020839110.1\|1400491_1401445_+\|SPI-1-type-III-secretion-system-effector-SopD	unknown	unknown	gnl\|CDD\|185277
NZ_CP045754.1\|WP_000036734.1\|1409426_1410725_-\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_CP045754.1\|WP_077909651.1\|1414748_1417448_+\|fimbrial-biogenesis-outer-membrane-usher-protein	unknown	unknown	gnl\|CDD\|185176
NZ_CP045754.1\|WP_000842511.1\|1414081_1414669_+\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185169
NZ_CP045754.1\|WP_000210863.1\|1410807_1412445_-\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_CP045754.1\|WP_020839107.1\|1406727_1407525_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|224158
NZ_CP045754.1\|WP_020839104.1\|1418277_1418760_+\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185178
NZ_CP045754.1\|WP_001591403.1\|1394196_1395255_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP045754.1\|WP_020839109.1\|1402342_1404055_-\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
NZ_CP045754.1\|WP_020839103.1\|1418774_1419245_+\|fimbrial-protein	unknown	unknown	gnl\|CDD\|185179
NZ_CP045754.1\|WP_020839112.1\|1395813_1397373_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_CP045754.1\|WP_020839105.1\|1417460_1418234_+\|fimbria/pilus-periplasmic-chaperone	unknown	unknown	gnl\|CDD\|185177
NZ_CP045754.1\|WP_020839111.1\|1397384_1400048_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP045754.1\|WP_001199961.1\|1408619_1409291_-\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126

Protein	Function_ID	Function_description	E-value
NZ_CP045754.1\|WP_020839113.1\|1395268_1395817_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	5.28868e-33
NZ_CP045754.1\|WP_000210451.1\|1412672_1413473_-\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	3.42454e-158
NZ_CP045754.1\|WP_001645986.1\|1401532_1402267_-\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	1.50033e-138
NZ_CP045754.1\|WP_001079648.1\|1419241_1419778_+\|fimbrial-protein	gnl\|CDD\|185168	PRK15260, PRK15260, fimbrial protein SteF; Provisional.	3.25472e-123
NZ_CP045754.1\|WP_000108313.1\|1406277_1406640_+\|6-carboxytetrahydropterin-synthase-QueD	gnl\|CDD\|238264	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is PTPS which catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin. The functional enzyme is a hexamer of identical subunits.	2.78454e-58
NZ_CP045754.1\|WP_020839108.1\|1404054_1405854_-\|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit	gnl\|CDD\|182862	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit.	0
NZ_CP045754.1\|WP_020839110.1\|1400491_1401445_+\|SPI-1-type-III-secretion-system-effector-SopD	gnl\|CDD\|185277	PRK15379, PRK15379, type III secretion system effector SopD.	0
NZ_CP045754.1\|WP_000036734.1\|1409426_1410725_-\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_CP045754.1\|WP_077909651.1\|1414748_1417448_+\|fimbrial-biogenesis-outer-membrane-usher-protein	gnl\|CDD\|185176	PRK15273, PRK15273, fimbrial biogenesis outer membrane usher protein.	0
NZ_CP045754.1\|WP_000842511.1\|1414081_1414669_+\|fimbrial-protein	gnl\|CDD\|185169	PRK15261, PRK15261, fimbrial protein SteA; Provisional.	6.76622e-100
NZ_CP045754.1\|WP_000210863.1\|1410807_1412445_-\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP045754.1\|WP_020839107.1\|1406727_1407525_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|224158	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only].	6.94953e-101
NZ_CP045754.1\|WP_020839104.1\|1418277_1418760_+\|fimbrial-protein	gnl\|CDD\|185178	PRK15275, PRK15275, putative fimbrial protein SteD; Provisional.	1.30857e-99
NZ_CP045754.1\|WP_001591403.1\|1394196_1395255_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	1.5515e-136
NZ_CP045754.1\|WP_020839109.1\|1402342_1404055_-\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
NZ_CP045754.1\|WP_020839103.1\|1418774_1419245_+\|fimbrial-protein	gnl\|CDD\|185179	PRK15276, PRK15276, putative fimbrial subunit SteE; Provisional.	4.46584e-100
NZ_CP045754.1\|WP_020839112.1\|1395813_1397373_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	1.08811e-170
NZ_CP045754.1\|WP_020839105.1\|1417460_1418234_+\|fimbria/pilus-periplasmic-chaperone	gnl\|CDD\|185177	PRK15274, PRK15274, putative periplasmic fimbrial chaperone protein SteC; Provisional.	0
NZ_CP045754.1\|WP_020839111.1\|1397384_1400048_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	0
NZ_CP045754.1\|WP_001199961.1\|1408619_1409291_-\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	1.43874e-155

>NZ_CP045754.1|WP_020839107.1|1406727_1407525_-|MBL-fold-metallo-hydrolase
MALRIRVLLENHKGAGADKSLKVRPGLSLLVEDESTSILFDTGPDGSFMQNALAMGIDLSDVSAVVLSHGHYDHCGGVPWLPDNSRIICHPDIARERYAAMTFLGITRKIKKLSCEVDYSRYRMMYTRGPLPIGENFIWSGEIPVVAPEAYGIFGGHDAEPDSILDEGVLIYQSTKGLVIITGCGHRGIANIVRHCQNITGIKRIYALVGGFHLRCASPFTMWRVRRFLQEHKPEKLCGCHCTGAWGRLWLPEITAPATGDVLRF
>NZ_CP045754.1|WP_000108313.1|1406277_1406640_+|6-carboxytetrahydropterin-synthase-QueD
MSTTLYKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGEVDPHTGWIMDFADLKAAFKPTYDRLDHYYLNDIPGLSNPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCVYRGE
>NZ_CP045754.1|WP_020839108.1|1404054_1405854_-|NADPH-dependent-assimilatory-sulfite-reductase-flavoprotein-subunit
MTTPAPLTGLLPLNPEQLARLQAATTDLTPEQLAWVSGYFWGVLNPRSGAVAVTPAPEGKMPGVTLISASQTGNARRVAEALRDDLLAANLNVTLVNAGDYKFKQIASEKLLVIVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDVLKSRAPVAAPSQSVATGSVNDIHTSPYTKDAPLAATLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVDGKTLPLAEALEWHFELTVNTANIVENYATLTRSESLLPLVGDKAQLQHYAATTPIVDMVRFSPAQLDAQALIDLLRPLTPRLYSIASAQAEVESEVHITVGVVRYDIEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRSFMQQRAAEGVEGKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLSRIDLAWSRDQKEKIYVQDKLREQGAELWRWINDGAHIYVCGDARRMAADVEKALLEVIAEFGGMDLESADEYLSELRVERRYQRDVY
>NZ_CP045754.1|WP_020839109.1|1402342_1404055_-|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAAQKLEPRHAMLLRCRLPGGVITTTQWQAIDKFSADNTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGATYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVDTFKEEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDDKWHLTLFIENGRILDYPGRPLKTGLLEIAKIHQGEFRITANQNLIIASVPESQKAKIETLARDHGLMNAVSAQRENSMACVSFPTCPLAMAEAERFLPSFTDKVEAILEKHGIPDEHIVMRVTGCPNGCGRAMLAEIGLVGKAPGRYNLHLGGNRIGTRIPRMYQENITEPDILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE
>NZ_CP045754.1|WP_001645986.1|1401532_1402267_-|phosphoadenosine-phosphosulfate-reductase
MSQLDLNALNELPKVDRVLALAETNAQLETLTAEERVAWALENLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYQFIDELTDKLKLNLKVYRAGESPAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELKAQTWFAGLRREQSGSRAHLPVLAIQRGVFKVLPIIDWDNRTVYQYLQKHGLKYHPLWDQGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP045754.1|WP_020839110.1|1400491_1401445_+|SPI-1-type-III-secretion-system-effector-SopD
MPVTLSFGNHQNYTLNESRLAHLLSADKEKAIHMGGWDKVQDHFRAEKKDHALEVLHSIIHGQGRGEPGEMDVNVEDINKIYAFKRLQHLACPAHQDLFTIKMDASQTQFLLMVGDTVISQSNIKDILNISDDAVIESMSREERQLFLQICEVIGSKMTWHPELLQESISTLRKEVTGNAQIKTAVYEMMRPAEAPDHPLVEWQDSLTADEKSMLACINAGNFEPTTQFCKIGYQEVQGEVAFSMMHPCISYLLHSYSPFSEFKPTNSGFLKKLNQDYNDYHAKKMFIDVILEKLYLTHERSLHIGKDGCSRNILLT
>NZ_CP045754.1|WP_020839111.1|1397384_1400048_-|CRISPR-associated-helicase/endonuclease-Cas3
MSIYHYWGKSRRGETNGGDDYHLLCWHSLDVAAVGYWMVINNIYFIDHYLKKLGIQDKEQAAQFFAWILCWHDIGKFAHSFQQLYRHEALNIFNEPTRHYEKIAHTTLGYVLWNSWLSECPELFPPSSLSVRKSKRVMALWMPVTTGHHGRPPEAIQELDHFRQQDKDAARDFLLRIKALFPLITLPEAWDEDEGIDQFQQLSWFISAAVVLADWTGSASRYFPRTAEKMPVDTYWQQALAKAQTAITLFPSAANVSAFTGIETLFPFIQHPTPLQQKALELDINVDGAQLFILEDVTGAGKTEAALILAHRLMAAGKAQGLYFGLPTMATANAMFERMANTWLALYQPDSRPSLILAHSARRLMDRFNQSIWSVTLSGTEEPDEAQPYSQGCAAWFADSNKKALLAEVGVGTLDQAMMAVMPFKHNNLRLLGLSNKILLADEIHACDAWMSRILEGLIERQASNGNATILLSATLSQQQRDKLVAAFSRGVRRSVQAPLLGHDDYPWLTQVTQTELISQRVDTRKEVERCVDIGWLHSEEACLERIGEAVEKGNCIAWIRNSVDDAIRIYRQLQLSKVVATENLLLFHSRFAFHDRQRIESQTLNLFGKQSGAQRAGKVIIATQVIEQSLDIDCDEMISDLAPVDLLIQRAGRLQRHIRDRNGLVKKSGQDERETPVLRILAPEWDDAPRENWLSSAMRNSAYVYPDHGRMWLTQRILREQGTIRMPQSARLLIESVYGEDVNMPVGFAKTEQLQEGKVHCDRAFAYQMLLNFAPGYCAEISDSLPEKMSTRLAEESVTLWLAKIVDGVVTPYASGEHAWEMSVLRVRQSWWNKHKDEFEKLDGEPLRKWCAQQHQDKDFATVIVVTDCAACGYSANEGLIGMMGE
>NZ_CP045754.1|WP_020839112.1|1395813_1397373_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MDNFSLLTTLWLPVRFKDGSTGKLAPVNLADENVVDIAATRADLQGAAWQFLLGLLQCSIAPKRYKNWEDIWFDGLHADALHKALAQLEHAFQFGAETPSFMQDFEELPDNKITIASLLPETPGIQTTELNTDHFIKRGVMECFCPHCAALALFSMQLNAPSGGQGYRTGLRGGGPLTTLIELQEYQGERQTPLWRKLWLNVMPQDAADLPLPVVYDAAVFPWLAATRTSEPPAHTITTDEQVNKLQAYWGMPRRIRLDFATIRQGVCNICGNNSDELLIQMLVKNYGVNYDRWRHPLTPHRLQIKNSKGFEPVITQPGGLLWRDWLGLSQENPTEKNTEYPAQVIKVFNARELRNIKVGLWGFGADFKKMKIRCWYEHHFPLLMTEGLIPDLRKATQTATRLLSLLRSALKEAWFANAKGARGDFSFIDIDFWNLTQGRFLNLIHDLENGHKPDERLNKWQRELWLFTRCYFDDHVFTNPYESSDLERIMKARKKYFTSSAEKQSAKAAKAKKQEAAE
>NZ_CP045754.1|WP_020839113.1|1395268_1395817_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MSIVQEDHKATLRKWHEDLQEKRGARASLRRSKTVNEACLSEGFHLLLMQTHSLWKNKADWHVTALAITAILAAHIKFIDERQSFATQLGQKKSGDNPVMSKLRFSRLSAVKNPDELLRHLRRAVQLLDGSVNLISLADDIFRWCQEQDDLLNHHRRQQRPTEFLRIRWALEYYQAGDNEQD
>NZ_CP045754.1|WP_001591403.1|1394196_1395255_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MTTFIQLHLLTAYPAANLNRDDTGAPKTVVLGGATRLRISSQSLKRAWRTSELFEQALAGNIGIRSGRIAREAAQILIESGIDAKKAVEYVKNIANYFGKVKAEKKPKDELTNAETGQLVHISPAEFEGVKALAHRLAEEKRAPKEEELALLRKDRMAVDIAMFGRMLAEKTDFNVEAACQVAHAFGVSETIVEDDFFTAVDDLRQASAEDAGAGHLGETGFGSALFYTYICINKDLLVKNLNDNEELANKTLRAFTEAALKVSPTGKQNSFASRAYASWALAEKGTDQPRSLAAAFYEPINGTDQLNVAVKRITSLHKNMNKVYGQRTDTASFDVMNQQGSMKDVLDFICA
>NZ_CP045754.1|WP_001199961.1|1408619_1409291_-|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWDKLSDREVSLFSILAKTKESDKWGAASSEDLLAVINRQGYTARHVVITGGEPCIHDLMPLTDLLEKSGFSCQIETSGTHEVRCTPNTWVTVSPKVNMRGGYDVLSQALERANEIKHPVGRVRDIEALDELLATLSDDKPRVIALQPISQKEDATRLCIETCIARNWRLSMQTHKYLNIA
>NZ_CP045754.1|WP_000036734.1|1409426_1410725_-|phosphopyruvate-hydratase
MSKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVGAVNGPIAQAILGKDAKDQAGIDKIMIDLDGTENKSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKGKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>NZ_CP045754.1|WP_000210863.1|1410807_1412445_-|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQLAVDIGREHALFMHLTLVPYLAAAGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISMKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIYEEANPAGEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVTVNIKLIDSQDVETRGVEILKDLDAILIPGGFGYRGVEGKIATARYARENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLSDDSLVRQLYGASTIVERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAANEHQKRQAK
>NZ_CP045754.1|WP_000210451.1|1412672_1413473_-|nucleoside-triphosphate-pyrophosphohydrolase
MTTNHQIDRLLTLMQRLRDPENGCPWDKEQTFASIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFGELSADNSEEALVRWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCSNVGFDWTTLGPVVDKVYEEIDEVMFEARQAVVDQAKLEEEMGDLLFATVNMARHLGTKAELALQKANDKFERRFREVERIVAARGLEMTGVDLETMEEVWQEVKRQEIDL
>NZ_CP045754.1|WP_000842511.1|1414081_1414669_+|fimbrial-protein
MKSSHFCKLAVTASLVMGIVSGAQAAGSNTAKVTFLGNIVDSPCSVTLDTEDQTVNMGSSIGNGTLSNGKTTINNARTFHIDLEGCTWATEKNMNVVFTTGSGTTAATGATDNLALMKTDGTGAISNVSLAIGDAGKNNIKLGDTYTQAIADLDGDSILDEKQSLNFTAWLVGAATGTVGTGEFSSAANVTISYL
>NZ_CP045754.1|WP_077909651.1|1414748_1417448_+|fimbrial-biogenesis-outer-membrane-usher-protein
MMNNTWKSVLCPIACGVGMLLSLSPYSASGKDIEFNTDFLDVKNRDNVNIAQFSRKGFILPGVYLLQIKINGQTLPQEFPVNWVIPEHDPQGSEVCAEPELVTQLGIKPELAEKLVWITHGERQCLAPDSLKGMDFQADLGHSTLLVNLPQAYMEYSDVDWDPPARWDNGIPGIILDYNINNQLRHDQESGSEEQSISGNGTLGANLGAWRLRADWQASYDHRDDDENTSTLHDQSWSRYYAYRALPTLGAKLTLGESYLQSDVFDSFNYIGASVISDDQMLPPKLRGYAPEIVGIARSNAKVKVSWQGRVLYETQVPAGPFRIQDLNQSVSGTLHVTVEEQNGQTQEFDVNTASVPFLTRPGMVRYKMALGRPQDWDHHPITGTFASAEASWGVTNGWSLYGGAIGESNYQAVALGSGKDLGVVGAVAVDITHSIAHMPQDDGFDGETLQGNSYRISYSRDFDEIDSRLTFAGYRFSEKNFMSMSDYLDAKTYHHLNAGHEKERYTVTYNQNFREQGMSAYFSYSRSTFWDSPDQSNYNLSLSWYFDLGSIKNLSASLNGYRSEYNGDKDDGVYISLSVPWGNDSISYNGMFNGSQHRNQLGYSGHSQNGDNWQLHVGQDEQGAQADGYYSHQGALTDIDLSADYEEGSYRSLGMSLRGGMTLTTQGGALHRGSLAGSTRLLVDTDGIADVPVSGNGSPTSTNIFGKAVIADVGSYSRSLARIDLNKLPEKAEATKSVVQITLTEGAIGYRHFDVVSGEKMMAVFRLADGDFPPFGAEVKNERQQQLGLVADDGNAWLAGVKAGETLKVFWDGAAQCEASLPSTFTPELLANALLLPCKMLEGQPPTAPQKSSPLPAQPLIQEHTQTDGQPAAPVATTTQTPPIPLADNHAVNRKDME
>NZ_CP045754.1|WP_020839105.1|1417460_1418234_+|fimbria/pilus-periplasmic-chaperone
MNKTNHFKRQALIASVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQAWLEDDKFAKDTRYFTALPPLQRIEPKSDGQVKVQPLPAAAGLPQDRESLFYFNVREIPPKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLTLTYQGDGVIFDNPTPFYLVISNAGSKGNETASGFKNLLIAPREKVTSPIKGASLGSSPVVSYVDDYGGHRLLVFTCSGNTCKVNEEKTRDAEKKANK
>NZ_CP045754.1|WP_020839104.1|1418277_1418760_+|fimbrial-protein
MLVLLCGGFVTGTEAAGTKTVQLELHLVVTQPPPCTVGGASVEFGDVLTTKVGDASQTKPVGYSLNCDGRASDYLKLQIQGTTTTISGEQVLQTSVQGLGIRIQQAGNKQLVPVGITDWLNFTLSGSNGPELEAVPVKEPTTQLAGGDFNASATLVVDYQ
>NZ_CP045754.1|WP_020839103.1|1418774_1419245_+|fimbrial-protein
MKRVLILTLLITQFACADNLTFHGKLINPPACTINNGETLEVSFGSVIIDNIDGVNYLTEIPWTLTCDSSFRDDALTFTLSYLGTATPYSAKALTTNVPELGIELQQNGTVFPPGTSLTIDESSLPTLKAVPVKQPGKEPAEGDFEAFATLQVDYQ
>NZ_CP045754.1|WP_001079648.1|1419241_1419778_+|fimbrial-protein
MNRIFQTAGHLIGGVMLWAVCNTLPAATPNVHYSGKLVAGACNLVVDNDTMATVDFHTIGSDNFDASGQTTPVPFTLSLQDCKTALANGVLVTFQGVEDSTLPGLLALEPSSEASGFAIGVETVAQQRLDINAVQGTAFMLKEGITTINLQARLQKYAGEDVMPGEFKGSATVSFEYQ

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP045754_2	2.4\|1407835\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1407835-1407866	32	NZ_CP034699	Salmonella enterica subsp. enterica serovar Karamoja strain RSE40 plasmid pRSE40, complete sequence	177960-177991	1	0.969
NZ_CP045754_2	2.4\|1407835\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1407835-1407866	32	NZ_CP034710	Salmonella enterica subsp. enterica serovar Karamoja strain RSE21 plasmid pRSE21, complete sequence	67131-67162	1	0.969
NZ_CP045754_1	1.2\|1390952\|32\|NZ_CP045754\|CRISPRCasFinder,CRT	1390952-1390983	32	NZ_CP041350	Komagataeibacter xylinus strain CGMCC 17276 plasmid pB, complete sequence	279-310	5	0.844
NZ_CP045754_1	1.2\|1390952\|32\|NZ_CP045754\|CRISPRCasFinder,CRT	1390952-1390983	32	NZ_CP014675	Kozakia baliensis strain DSM 14400 plasmid pKB14400_1, complete sequence	171734-171765	6	0.812
NZ_CP045754_1	1.2\|1390952\|32\|NZ_CP045754\|CRISPRCasFinder,CRT	1390952-1390983	32	NZ_CP034470	Pantoea agglomerans strain CFSAN047153 plasmid pCFSAN047153_1, complete sequence	562790-562821	6	0.812
NZ_CP045754_1	1.2\|1390952\|32\|NZ_CP045754\|CRISPRCasFinder,CRT	1390952-1390983	32	NZ_CP034475	Pantoea agglomerans strain CFSAN047154 plasmid pCFSAN047154_1, complete sequence	243956-243987	6	0.812
NZ_CP045754_2	2.11\|1408263\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1408263-1408294	32	NC_019849	Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence	850282-850313	6	0.812
NZ_CP045754_2	2.11\|1408263\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1408263-1408294	32	NC_003078	Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence	887728-887759	6	0.812
NZ_CP045754_2	2.11\|1408263\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1408263-1408294	32	NZ_CP019586	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence	856045-856076	6	0.812
NZ_CP045754_2	2.11\|1408263\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1408263-1408294	32	NC_017326	Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence	835457-835488	6	0.812
NZ_CP045754_2	2.11\|1408263\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1408263-1408294	32	NZ_CP021799	Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence	953948-953979	6	0.812
NZ_CP045754_2	2.11\|1408263\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1408263-1408294	32	NC_017323	Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence	431895-431926	6	0.812
NZ_CP045754_2	2.11\|1408263\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1408263-1408294	32	NZ_CP009146	Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence	843687-843718	6	0.812
NZ_CP045754_2	2.11\|1408263\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1408263-1408294	32	NC_018701	Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence	833486-833517	6	0.812
NZ_CP045754_2	2.11\|1408263\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1408263-1408294	32	NZ_CP021828	Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence	457962-457993	6	0.812
NZ_CP045754_2	2.11\|1408263\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1408263-1408294	32	NZ_CP021802	Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence	1502459-1502490	6	0.812
NZ_CP045754_2	2.11\|1408263\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1408263-1408294	32	NZ_CP021820	Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence	1188725-1188756	6	0.812
NZ_CP045754_2	2.11\|1408263\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1408263-1408294	32	NZ_CP021831	Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence	1094940-1094971	6	0.812
NZ_CP045754_2	2.11\|1408263\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1408263-1408294	32	NZ_CP021823	Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence	574071-574102	6	0.812
NZ_CP045754_2	2.11\|1408263\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1408263-1408294	32	NZ_CP021814	Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence	758103-758134	6	0.812
NZ_CP045754_2	2.11\|1408263\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1408263-1408294	32	NZ_CP021795	Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence	92938-92969	6	0.812
NZ_CP045754_2	2.11\|1408263\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1408263-1408294	32	NZ_CP021810	Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence	1622461-1622492	6	0.812
NZ_CP045754_2	2.11\|1408263\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1408263-1408294	32	NZ_CP021806	Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence	174090-174121	6	0.812
NZ_CP045754_2	2.11\|1408263\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1408263-1408294	32	NZ_CP021218	Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence	996227-996258	6	0.812
NZ_CP045754_2	2.11\|1408263\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1408263-1408294	32	NZ_CP026527	Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence	856529-856560	6	0.812
NZ_CP045754_2	2.11\|1408263\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1408263-1408294	32	NZ_CP019484	Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence	1026857-1026888	6	0.812
NZ_CP045754_2	2.11\|1408263\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1408263-1408294	32	NZ_CP019487	Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence	801217-801248	6	0.812
NZ_CP045754_2	2.11\|1408263\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1408263-1408294	32	NC_020560	Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence	887731-887762	6	0.812
NZ_CP045754_1	1.2\|1390952\|32\|NZ_CP045754\|CRISPRCasFinder,CRT	1390952-1390983	32	NZ_CP041350	Komagataeibacter xylinus strain CGMCC 17276 plasmid pB, complete sequence	180897-180928	7	0.781
NZ_CP045754_1	1.2\|1390952\|32\|NZ_CP045754\|CRISPRCasFinder,CRT	1390952-1390983	32	NZ_CP007796	Azospirillum brasilense strain Az39 plasmid AbAZ39_p3, complete sequence	549969-550000	7	0.781
NZ_CP045754_1	1.2\|1390952\|32\|NZ_CP045754\|CRISPRCasFinder,CRT	1390952-1390983	32	AP021850	Deinococcus grandis ATCC 43672 plasmid: pDEGR-1 DNA, complete genome	10007-10038	7	0.781
NZ_CP045754_1	1.3\|1391013\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1391013-1391044	32	NZ_CP022775	Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence	1129847-1129878	7	0.781
NZ_CP045754_1	1.3\|1391013\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1391013-1391044	32	NZ_CP026091	Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence	1783651-1783682	7	0.781
NZ_CP045754_1	1.3\|1391013\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1391013-1391044	32	NC_014309	Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome	2012965-2012996	7	0.781
NZ_CP045754_1	1.3\|1391013\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1391013-1391044	32	NZ_CP021653	Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence	1726765-1726796	7	0.781
NZ_CP045754_1	1.3\|1391013\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1391013-1391044	32	NC_014310	Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence	1171924-1171955	7	0.781
NZ_CP045754_1	1.3\|1391013\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1391013-1391044	32	NZ_CP022762	Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence	1042739-1042770	7	0.781
NZ_CP045754_1	1.3\|1391013\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1391013-1391044	32	NZ_CP026093	Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence	1783787-1783818	7	0.781
NZ_CP045754_1	1.3\|1391013\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1391013-1391044	32	NZ_CP021767	Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence	1726762-1726793	7	0.781
NZ_CP045754_1	1.3\|1391013\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1391013-1391044	32	NZ_CP012940	Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence	236953-236984	7	0.781
NZ_CP045754_1	1.3\|1391013\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1391013-1391044	32	NZ_CP012944	Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence	148007-148038	7	0.781
NZ_CP045754_1	1.3\|1391013\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1391013-1391044	32	NZ_CP012688	Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence	1726763-1726794	7	0.781
NZ_CP045754_1	1.3\|1391013\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1391013-1391044	32	NZ_CP023017	Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence	1108332-1108363	7	0.781
NZ_CP045754_1	1.3\|1391013\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1391013-1391044	32	NZ_CP014703	Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence	1041836-1041867	7	0.781
NZ_CP045754_1	1.3\|1391013\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1391013-1391044	32	NZ_CP022760	Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence	1074580-1074611	7	0.781
NZ_CP045754_1	1.3\|1391013\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1391013-1391044	32	NZ_CP022789	Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence	1074569-1074600	7	0.781
NZ_CP045754_1	1.3\|1391013\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1391013-1391044	32	NC_017575	Ralstonia solanacearum Po82 megaplasmid, complete sequence	1783312-1783343	7	0.781
NZ_CP045754_1	1.3\|1391013\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1391013-1391044	32	NZ_CP022771	Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence	1042731-1042762	7	0.781
NZ_CP045754_1	1.3\|1391013\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1391013-1391044	32	NZ_CP022777	Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence	1042087-1042118	7	0.781
NZ_CP045754_1	1.3\|1391013\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1391013-1391044	32	NZ_CP022799	Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence	1042722-1042753	7	0.781
NZ_CP045754_1	1.3\|1391013\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1391013-1391044	32	NZ_CP026308	Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence	1783257-1783288	7	0.781
NZ_CP045754_1	1.3\|1391013\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1391013-1391044	32	CP047139	Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence	370077-370108	7	0.781
NZ_CP045754_1	1.3\|1391013\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1391013-1391044	32	NZ_CP051295	Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence	235444-235475	7	0.781
NZ_CP045754_1	1.3\|1391013\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1391013-1391044	32	CP047137	Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence	350195-350226	7	0.781
NZ_CP045754_1	1.3\|1391013\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1391013-1391044	32	NZ_CP022764	Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence	1129950-1129981	7	0.781
NZ_CP045754_1	1.3\|1391013\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1391013-1391044	32	NZ_CP022797	Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence	1129944-1129975	7	0.781
NZ_CP045754_1	1.3\|1391013\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1391013-1391044	32	NZ_CP022758	Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence	1129927-1129958	7	0.781
NZ_CP045754_1	1.7\|1391258\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1391258-1391289	32	NZ_CP023068	Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence	1108376-1108407	7	0.781
NZ_CP045754_2	2.11\|1408263\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1408263-1408294	32	NZ_CP030829	Neorhizobium sp. NCHU2750 plasmid pNCHU2750b, complete sequence	360377-360408	7	0.781
NZ_CP045754_1	1.2\|1390952\|32\|NZ_CP045754\|CRISPRCasFinder,CRT	1390952-1390983	32	NZ_AP017656	Sphingobium cloacae strain JCM 10874 plasmid pSCLO_2, complete sequence	324002-324033	8	0.75
NZ_CP045754_1	1.2\|1390952\|32\|NZ_CP045754\|CRISPRCasFinder,CRT	1390952-1390983	32	NZ_CP022369	Azospirillum sp. TSH58 plasmid TSH58_p05, complete sequence	315007-315038	8	0.75
NZ_CP045754_1	1.2\|1390952\|32\|NZ_CP045754\|CRISPRCasFinder,CRT	1390952-1390983	32	NZ_CP032342	Azospirillum brasilense strain MTCC4038 plasmid p3, complete sequence	285481-285512	8	0.75
NZ_CP045754_1	1.2\|1390952\|32\|NZ_CP045754\|CRISPRCasFinder,CRT	1390952-1390983	32	NZ_CP033321	Azospirillum brasilense strain Cd plasmid p3, complete sequence	122710-122741	8	0.75
NZ_CP045754_1	1.2\|1390952\|32\|NZ_CP045754\|CRISPRCasFinder,CRT	1390952-1390983	32	NZ_CP033315	Azospirillum brasilense strain Sp 7 plasmid p3, complete sequence	412688-412719	8	0.75
NZ_CP045754_1	1.2\|1390952\|32\|NZ_CP045754\|CRISPRCasFinder,CRT	1390952-1390983	32	MF150911	Ralstonia phage DU_RP_II, complete genome	2434-2465	8	0.75
NZ_CP045754_1	1.2\|1390952\|32\|NZ_CP045754\|CRISPRCasFinder,CRT	1390952-1390983	32	MN996301	Ralstonia phage RpY1, complete genome	18901-18932	8	0.75
NZ_CP045754_1	1.2\|1390952\|32\|NZ_CP045754\|CRISPRCasFinder,CRT	1390952-1390983	32	NC_011273	Mycobacterium phage Myrna, complete genome	58326-58357	8	0.75
NZ_CP045754_1	1.6\|1391197\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1391197-1391228	32	JQ680367	Unidentified phage clone 2203_scaffold802 genomic sequence	371-402	8	0.75
NZ_CP045754_1	1.7\|1391258\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1391258-1391289	32	NZ_CP054621	Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence	633490-633521	8	0.75
NZ_CP045754_1	1.7\|1391258\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1391258-1391289	32	MN116494	Klebsiella phage vB_KpnP_Bp5, complete genome	14650-14681	8	0.75
NZ_CP045754_1	1.10\|1391441\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1391441-1391472	32	CP024685	Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-1-490K, complete sequence	101688-101719	8	0.75
NZ_CP045754_2	2.7\|1408018\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1408018-1408049	32	CP024685	Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-1-490K, complete sequence	135469-135500	8	0.75
NZ_CP045754_2	2.7\|1408018\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1408018-1408049	32	NZ_CP031801	Klebsiella pneumoniae strain MSB1_8A-sc-2280397 plasmid unnamed1, complete sequence	11654-11685	8	0.75
NZ_CP045754_2	2.11\|1408263\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1408263-1408294	32	NC_012811	Methylorubrum extorquens AM1 megaplasmid, complete sequence	43093-43124	8	0.75
NZ_CP045754_2	2.11\|1408263\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1408263-1408294	32	NZ_CP053442	Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eD, complete sequence	152052-152083	8	0.75
NZ_CP045754_1	1.2\|1390952\|32\|NZ_CP045754\|CRISPRCasFinder,CRT	1390952-1390983	32	NZ_CP015882	Ensifer adhaerens strain Casida A plasmid pCasidaAB, complete sequence	85269-85300	9	0.719
NZ_CP045754_1	1.2\|1390952\|32\|NZ_CP045754\|CRISPRCasFinder,CRT	1390952-1390983	32	NZ_CP022369	Azospirillum sp. TSH58 plasmid TSH58_p05, complete sequence	181739-181770	9	0.719
NZ_CP045754_1	1.2\|1390952\|32\|NZ_CP045754\|CRISPRCasFinder,CRT	1390952-1390983	32	NZ_CP015040	Rhodovulum sp. P5 plasmid pRGUI01, complete sequence	68741-68772	9	0.719
NZ_CP045754_1	1.2\|1390952\|32\|NZ_CP045754\|CRISPRCasFinder,CRT	1390952-1390983	32	NZ_CP016619	Microvirga ossetica strain V5/3m plasmid unnamed2, complete sequence	942394-942425	9	0.719
NZ_CP045754_1	1.2\|1390952\|32\|NZ_CP045754\|CRISPRCasFinder,CRT	1390952-1390983	32	MH588547	Caulobacter phage CcrSC, complete genome	48931-48962	9	0.719
NZ_CP045754_1	1.7\|1391258\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1391258-1391289	32	MN586053	Arthrobacter phage BeatusComedenti, complete genome	46641-46672	9	0.719
NZ_CP045754_1	1.7\|1391258\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1391258-1391289	32	KT964103	Klebsiella phage vB_KpnP_KpV41, complete genome	15489-15520	9	0.719
NZ_CP045754_1	1.7\|1391258\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1391258-1391289	32	NC_031254	Arthrobacter phage Kitkat, complete genome	46736-46767	9	0.719
NZ_CP045754_2	2.9\|1408141\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1408141-1408172	32	NZ_CP051686	Duganella sp. GN2-R2 plasmid unnamed1, complete sequence	45237-45268	9	0.719
NZ_CP045754_2	2.1\|1407652\|32\|NZ_CP045754\|CRISPRCasFinder,CRT	1407652-1407683	32	NZ_CP054615	Azospirillum oryzae strain KACC 14407 plasmid unnamed1, complete sequence	146919-146950	10	0.688
NZ_CP045754_2	2.3\|1407774\|32\|NZ_CP045754\|CRISPRCasFinder,CRT,PILER-CR	1407774-1407805	32	NZ_CP044072	Pseudomonas oryzihabitans strain FDAARGOS_657 plasmid unnamed1, complete sequence	99817-99848	10	0.688

1. spacer 2.4|1407835|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034699 (Salmonella enterica subsp. enterica serovar Karamoja strain RSE40 plasmid pRSE40, complete sequence) position: , mismatch: 1, identity: 0.969

tgcgtaatgggctacctgaacttcacatatcc	CRISPR spacer
tgcgtagtgggctacctgaacttcacatatcc	Protospacer
******.*************************

2. spacer 2.4|1407835|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034710 (Salmonella enterica subsp. enterica serovar Karamoja strain RSE21 plasmid pRSE21, complete sequence) position: , mismatch: 1, identity: 0.969

tgcgtaatgggctacctgaacttcacatatcc	CRISPR spacer
tgcgtagtgggctacctgaacttcacatatcc	Protospacer
******.*************************

3. spacer 1.2|1390952|32|NZ_CP045754|CRISPRCasFinder,CRT matches to NZ_CP041350 (Komagataeibacter xylinus strain CGMCC 17276 plasmid pB, complete sequence) position: , mismatch: 5, identity: 0.844

gagctgg-cgaacctgatggcgggcgacgtgga	CRISPR spacer
-agcgggccgaacctgatggcgggtaacgtggt	Protospacer
 *** ** ****************..******

4. spacer 1.2|1390952|32|NZ_CP045754|CRISPRCasFinder,CRT matches to NZ_CP014675 (Kozakia baliensis strain DSM 14400 plasmid pKB14400_1, complete sequence) position: , mismatch: 6, identity: 0.812

gagctggcgaacctgatggcgggcgacgtgga	CRISPR spacer
gcggggccgaacctgatggcgggcaacgtggt	Protospacer
* *  * *****************.******

5. spacer 1.2|1390952|32|NZ_CP045754|CRISPRCasFinder,CRT matches to NZ_CP034470 (Pantoea agglomerans strain CFSAN047153 plasmid pCFSAN047153_1, complete sequence) position: , mismatch: 6, identity: 0.812

gagctggcgaacctgatggcgggcgacgtgga	CRISPR spacer
gtgctggcgagcctgatggcgggcgcactgaa	Protospacer
* ********.**************   **.*

6. spacer 1.2|1390952|32|NZ_CP045754|CRISPRCasFinder,CRT matches to NZ_CP034475 (Pantoea agglomerans strain CFSAN047154 plasmid pCFSAN047154_1, complete sequence) position: , mismatch: 6, identity: 0.812

gagctggcgaacctgatggcgggcgacgtgga	CRISPR spacer
gtgctggcgagcctgatggcgggcgcactgaa	Protospacer
* ********.**************   **.*

7. spacer 2.11|1408263|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to NC_019849 (Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

8. spacer 2.11|1408263|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to NC_003078 (Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

9. spacer 2.11|1408263|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019586 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

10. spacer 2.11|1408263|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to NC_017326 (Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

11. spacer 2.11|1408263|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021799 (Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

12. spacer 2.11|1408263|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to NC_017323 (Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

13. spacer 2.11|1408263|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009146 (Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

14. spacer 2.11|1408263|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to NC_018701 (Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

15. spacer 2.11|1408263|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021828 (Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

16. spacer 2.11|1408263|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021802 (Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

17. spacer 2.11|1408263|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021820 (Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

18. spacer 2.11|1408263|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021831 (Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

19. spacer 2.11|1408263|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021823 (Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

20. spacer 2.11|1408263|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021814 (Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

21. spacer 2.11|1408263|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021795 (Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

22. spacer 2.11|1408263|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021810 (Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

23. spacer 2.11|1408263|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021806 (Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

24. spacer 2.11|1408263|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021218 (Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

25. spacer 2.11|1408263|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026527 (Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

26. spacer 2.11|1408263|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019484 (Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

27. spacer 2.11|1408263|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019487 (Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

28. spacer 2.11|1408263|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to NC_020560 (Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence) position: , mismatch: 6, identity: 0.812

tatttcgc--cttcggcactgacgtcaccgtcaa	CRISPR spacer
--ttccgccgcttcggctccgacgtcaccgtcat	Protospacer
  **.***  ******* *.*************

29. spacer 1.2|1390952|32|NZ_CP045754|CRISPRCasFinder,CRT matches to NZ_CP041350 (Komagataeibacter xylinus strain CGMCC 17276 plasmid pB, complete sequence) position: , mismatch: 7, identity: 0.781

gagctggcgaacctgatggcgggcgacgtgga	CRISPR spacer
gcggggccgaacctgatggcgggtaacgtggt	Protospacer
* *  * ****************..******

30. spacer 1.2|1390952|32|NZ_CP045754|CRISPRCasFinder,CRT matches to NZ_CP007796 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p3, complete sequence) position: , mismatch: 7, identity: 0.781

gagctggcgaacctgatggcgggcgacgtgga	CRISPR spacer
gcgctggagcacctgatggcgggcggtctcga	Protospacer
* ***** * ***************.. * **

31. spacer 1.2|1390952|32|NZ_CP045754|CRISPRCasFinder,CRT matches to AP021850 (Deinococcus grandis ATCC 43672 plasmid: pDEGR-1 DNA, complete genome) position: , mismatch: 7, identity: 0.781

gagctggcgaacctgatggcgggcg---acgtgga	CRISPR spacer
gcgctggcgtacctgatcgcgggcgggcacct---	Protospacer
* ******* ******* *******   ** *

32. spacer 1.3|1391013|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022775 (Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

cctgaatactcgcagcgatttgcgcgatctgg	CRISPR spacer
cctggggcatcgcagcgatttccgcgacctgg	Protospacer
****..   ************ *****.****

33. spacer 1.3|1391013|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026091 (Ralstonia solanacearum strain IBSBF 2570 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

cctgaatactcgcagcgatttgcgcgatctgg	CRISPR spacer
cctggggcgtcgcagcgatttccgcgacctgg	Protospacer
****..   ************ *****.****

34. spacer 1.3|1391013|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to NC_014309 (Ralstonia solanacearum CFBP2957 plasmid RCFBPv3_mp, complete genome) position: , mismatch: 7, identity: 0.781

cctgaatactcgcagcgatttgcgcgatctgg	CRISPR spacer
cctggggcgtcgcagcgatttccgcgacctgg	Protospacer
****..   ************ *****.****

35. spacer 1.3|1391013|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021653 (Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

cctgaatactcgcagcgatttgcgcgatctgg	CRISPR spacer
cctggggcgtcgcagcgatttccgcgacctgg	Protospacer
****..   ************ *****.****

36. spacer 1.3|1391013|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 7, identity: 0.781

cctgaatactcgcagcgatttgcgcgatctgg	CRISPR spacer
cctggggcgtcgcagcgatttccgcgacctgg	Protospacer
****..   ************ *****.****

37. spacer 1.3|1391013|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022762 (Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

cctgaatactcgcagcgatttgcgcgatctgg	CRISPR spacer
cctggggcatcgcagcgatttccgcgacctgg	Protospacer
****..   ************ *****.****

38. spacer 1.3|1391013|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026093 (Ralstonia solanacearum strain SFC plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

cctgaatactcgcagcgatttgcgcgatctgg	CRISPR spacer
cctggggcgtcgcagcgatttccgcgacctgg	Protospacer
****..   ************ *****.****

39. spacer 1.3|1391013|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021767 (Ralstonia solanacearum strain RS 489 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

cctgaatactcgcagcgatttgcgcgatctgg	CRISPR spacer
cctggggcgtcgcagcgatttccgcgacctgg	Protospacer
****..   ************ *****.****

40. spacer 1.3|1391013|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012940 (Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

cctgaatactcgcagcgatttgcgcgatctgg	CRISPR spacer
cctggggcgtcgcagcgatttccgcgacctgg	Protospacer
****..   ************ *****.****

41. spacer 1.3|1391013|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012944 (Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

cctgaatactcgcagcgatttgcgcgatctgg	CRISPR spacer
cctggggcgtcgcagcgatttccgcgacctgg	Protospacer
****..   ************ *****.****

42. spacer 1.3|1391013|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012688 (Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

cctgaatactcgcagcgatttgcgcgatctgg	CRISPR spacer
cctggggcgtcgcagcgatttccgcgacctgg	Protospacer
****..   ************ *****.****

43. spacer 1.3|1391013|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023017 (Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

cctgaatactcgcagcgatttgcgcgatctgg	CRISPR spacer
cctggggcatcgcagcgatttccgcgacctgg	Protospacer
****..   ************ *****.****

44. spacer 1.3|1391013|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014703 (Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence) position: , mismatch: 7, identity: 0.781

cctgaatactcgcagcgatttgcgcgatctgg	CRISPR spacer
cctggggcatcgcagcgatttccgcgacctgg	Protospacer
****..   ************ *****.****

45. spacer 1.3|1391013|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022760 (Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

cctgaatactcgcagcgatttgcgcgatctgg	CRISPR spacer
cctggggcgtcgcagcgatttccgcgacctgg	Protospacer
****..   ************ *****.****

46. spacer 1.3|1391013|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022789 (Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

cctgaatactcgcagcgatttgcgcgatctgg	CRISPR spacer
cctggggcgtcgcagcgatttccgcgacctgg	Protospacer
****..   ************ *****.****

47. spacer 1.3|1391013|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to NC_017575 (Ralstonia solanacearum Po82 megaplasmid, complete sequence) position: , mismatch: 7, identity: 0.781

cctgaatactcgcagcgatttgcgcgatctgg	CRISPR spacer
cctggggcgtcgcagcgatttccgcgacctgg	Protospacer
****..   ************ *****.****

48. spacer 1.3|1391013|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022771 (Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

cctgaatactcgcagcgatttgcgcgatctgg	CRISPR spacer
cctggggcatcgcagcgatttccgcgacctgg	Protospacer
****..   ************ *****.****

49. spacer 1.3|1391013|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022777 (Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

cctgaatactcgcagcgatttgcgcgatctgg	CRISPR spacer
cctggggcatcgcagcgatttccgcgacctgg	Protospacer
****..   ************ *****.****

50. spacer 1.3|1391013|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022799 (Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

cctgaatactcgcagcgatttgcgcgatctgg	CRISPR spacer
cctggggcatcgcagcgatttccgcgacctgg	Protospacer
****..   ************ *****.****

51. spacer 1.3|1391013|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026308 (Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

cctgaatactcgcagcgatttgcgcgatctgg	CRISPR spacer
cctggggcgtcgcagcgatttccgcgacctgg	Protospacer
****..   ************ *****.****

52. spacer 1.3|1391013|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to CP047139 (Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

cctgaatactcgcagcgatttgcgcgatctgg	CRISPR spacer
cctggggcgtcgcagcgatttccgcgacctgg	Protospacer
****..   ************ *****.****

53. spacer 1.3|1391013|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP051295 (Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence) position: , mismatch: 7, identity: 0.781

cctgaatactcgcagcgatttgcgcgatctgg	CRISPR spacer
cctggggcgtcgcagcgatttccgcgacctgg	Protospacer
****..   ************ *****.****

54. spacer 1.3|1391013|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to CP047137 (Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

cctgaatactcgcagcgatttgcgcgatctgg	CRISPR spacer
cctggggcgtcgcagcgatttccgcgacctgg	Protospacer
****..   ************ *****.****

55. spacer 1.3|1391013|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022764 (Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

cctgaatactcgcagcgatttgcgcgatctgg	CRISPR spacer
cctggggcatcgcagcgatttccgcgacctgg	Protospacer
****..   ************ *****.****

56. spacer 1.3|1391013|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022797 (Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

cctgaatactcgcagcgatttgcgcgatctgg	CRISPR spacer
cctggggcatcgcagcgatttccgcgacctgg	Protospacer
****..   ************ *****.****

57. spacer 1.3|1391013|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022758 (Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

cctgaatactcgcagcgatttgcgcgatctgg	CRISPR spacer
cctggggcatcgcagcgatttccgcgacctgg	Protospacer
****..   ************ *****.****

58. spacer 1.7|1391258|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023068 (Ensifer sojae CCBAU 05684 plasmid pSJ05684b, complete sequence) position: , mismatch: 7, identity: 0.781

ttgataatcgccagcttgaccagt-ttggcatc	CRISPR spacer
ttgataatcgccagctcgaccagcaccggcgc-	Protospacer
****************.******. ..***..

59. spacer 2.11|1408263|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030829 (Neorhizobium sp. NCHU2750 plasmid pNCHU2750b, complete sequence) position: , mismatch: 7, identity: 0.781

tatttcgccttcggcactgacgtcaccgtcaa	CRISPR spacer
tacgtcgccttcggcaatgtcgtcaccgaaga	Protospacer
**. ************ ** ********  .*

60. spacer 1.2|1390952|32|NZ_CP045754|CRISPRCasFinder,CRT matches to NZ_AP017656 (Sphingobium cloacae strain JCM 10874 plasmid pSCLO_2, complete sequence) position: , mismatch: 8, identity: 0.75

gagctggcgaacctgatggcgggcgacgtgga	CRISPR spacer
gccgtggcgatcctgatagcgggcgacctcgg	Protospacer
*   ****** ******.********* * *.

61. spacer 1.2|1390952|32|NZ_CP045754|CRISPRCasFinder,CRT matches to NZ_CP022369 (Azospirillum sp. TSH58 plasmid TSH58_p05, complete sequence) position: , mismatch: 8, identity: 0.75

gagctggcgaacctgatggcgggcgacgtgga	CRISPR spacer
acgctggagcacctgatggcgggcggtctcga	Protospacer
. ***** * ***************.. * **

62. spacer 1.2|1390952|32|NZ_CP045754|CRISPRCasFinder,CRT matches to NZ_CP032342 (Azospirillum brasilense strain MTCC4038 plasmid p3, complete sequence) position: , mismatch: 8, identity: 0.75

gagctggcgaacctgatggcgggcgacgtgga	CRISPR spacer
acgctggagcacctgatggcgggcggtctcga	Protospacer
. ***** * ***************.. * **

63. spacer 1.2|1390952|32|NZ_CP045754|CRISPRCasFinder,CRT matches to NZ_CP033321 (Azospirillum brasilense strain Cd plasmid p3, complete sequence) position: , mismatch: 8, identity: 0.75

gagctggcgaacctgatggcgggcgacgtgga	CRISPR spacer
acgctggagcacctgatggcgggcggtctcga	Protospacer
. ***** * ***************.. * **

64. spacer 1.2|1390952|32|NZ_CP045754|CRISPRCasFinder,CRT matches to NZ_CP033315 (Azospirillum brasilense strain Sp 7 plasmid p3, complete sequence) position: , mismatch: 8, identity: 0.75

gagctggcgaacctgatggcgggcgacgtgga	CRISPR spacer
acgctggagcacctgatggcgggcggtctcga	Protospacer
. ***** * ***************.. * **

65. spacer 1.2|1390952|32|NZ_CP045754|CRISPRCasFinder,CRT matches to MF150911 (Ralstonia phage DU_RP_II, complete genome) position: , mismatch: 8, identity: 0.75

gagctggcgaacctgatggcgggcgacgtgga	CRISPR spacer
caggcgcgcaaccggatggcggccgacgtgga	Protospacer
 ** .*   **** ******** *********

66. spacer 1.2|1390952|32|NZ_CP045754|CRISPRCasFinder,CRT matches to MN996301 (Ralstonia phage RpY1, complete genome) position: , mismatch: 8, identity: 0.75

gagctggcgaacctgatggcgggcgacgtgga	CRISPR spacer
caggcgcgcaaccggatggcggccgacgtgga	Protospacer
 ** .*   **** ******** *********

67. spacer 1.2|1390952|32|NZ_CP045754|CRISPRCasFinder,CRT matches to NC_011273 (Mycobacterium phage Myrna, complete genome) position: , mismatch: 8, identity: 0.75

gagctggcgaacctgatggcgggcgacgtgga	CRISPR spacer
gacggcgtgaacctggtggcaggcgacgtggt	Protospacer
**    *.*******.****.**********

68. spacer 1.6|1391197|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to JQ680367 (Unidentified phage clone 2203_scaffold802 genomic sequence) position: , mismatch: 8, identity: 0.75

gttgcttgccgctgctcaaggagtttatttcc	CRISPR spacer
cttgcctgccgctgctcaaggcgttcaagcgc	Protospacer
 ****.*************** ***.*  . *

69. spacer 1.7|1391258|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054621 (Azospirillum oryzae strain KACC 14407 plasmid unnamed6, complete sequence) position: , mismatch: 8, identity: 0.75

--ttgataatcgccagcttgaccagtttggcatc	CRISPR spacer
cggcggtga--gccagcttgacctgcttggcatc	Protospacer
   .*.*.*  ************ *.********

70. spacer 1.7|1391258|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to MN116494 (Klebsiella phage vB_KpnP_Bp5, complete genome) position: , mismatch: 8, identity: 0.75

ttgataatcgccagcttgaccagtttggcatc	CRISPR spacer
tataggaccgccagcttgtccagtttgtcata	Protospacer
*  * .*.********** ******** ***

71. spacer 1.10|1391441|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to CP024685 (Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-1-490K, complete sequence) position: , mismatch: 8, identity: 0.75

gtaaatatccagatatatggacgccaattata	CRISPR spacer
gtaaatatccagatatttagacgaaagataat	Protospacer
**************** *.****  *. **

72. spacer 2.7|1408018|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to CP024685 (Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-1-490K, complete sequence) position: , mismatch: 8, identity: 0.75

taacgaactgaataaaatgtcagaaagtgacg	CRISPR spacer
ggcagaactgaataaaatgtctgatagtgaat	Protospacer
 .  ***************** ** *****

73. spacer 2.7|1408018|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031801 (Klebsiella pneumoniae strain MSB1_8A-sc-2280397 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

taacgaactgaataaaatgtcagaaagtgacg	CRISPR spacer
aaatgaactgaatacaatgtcagacacgcgcg	Protospacer
 **.********** ********* *   .**

74. spacer 2.11|1408263|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to NC_012811 (Methylorubrum extorquens AM1 megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.75

tatttcgccttcggcactgacgtcaccgtcaa	CRISPR spacer
tcgaacaccttcgtcacggacgtcaccgtcga	Protospacer
*    *.****** *** ************.*

75. spacer 2.11|1408263|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053442 (Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eD, complete sequence) position: , mismatch: 8, identity: 0.75

tatttcgccttcggcactgacgtcaccgtcaa	CRISPR spacer
cattgcgccttcggcacggacgtccaccagaa	Protospacer
.*** ************ ******  *   **

76. spacer 1.2|1390952|32|NZ_CP045754|CRISPRCasFinder,CRT matches to NZ_CP015882 (Ensifer adhaerens strain Casida A plasmid pCasidaAB, complete sequence) position: , mismatch: 9, identity: 0.719

gagctggcgaacctgatggcgggcgacgtgga	CRISPR spacer
tggtcaatgaccctgatggcgcgcgacgtgga	Protospacer
 .*.....** ********** **********

77. spacer 1.2|1390952|32|NZ_CP045754|CRISPRCasFinder,CRT matches to NZ_CP022369 (Azospirillum sp. TSH58 plasmid TSH58_p05, complete sequence) position: , mismatch: 9, identity: 0.719

gagctggcgaacctgatggcgggcgacgtgga	CRISPR spacer
gccggggcgagcctgatggcgggcgccgggct	Protospacer
*    *****.************** ** *

78. spacer 1.2|1390952|32|NZ_CP045754|CRISPRCasFinder,CRT matches to NZ_CP015040 (Rhodovulum sp. P5 plasmid pRGUI01, complete sequence) position: , mismatch: 9, identity: 0.719

gagctggcgaacctgatggcgggcgacgtgga	CRISPR spacer
ccgtcgatgaacctgatcgcgggcgaggtggc	Protospacer
  *..*..********* ******** ****

79. spacer 1.2|1390952|32|NZ_CP045754|CRISPRCasFinder,CRT matches to NZ_CP016619 (Microvirga ossetica strain V5/3m plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

gagctggcgaacctgatggcgggcgacgtgga	CRISPR spacer
cttctggcgaacctcatcgcgggcgatgatgt	Protospacer
   *********** ** ********.*  *

80. spacer 1.2|1390952|32|NZ_CP045754|CRISPRCasFinder,CRT matches to MH588547 (Caulobacter phage CcrSC, complete genome) position: , mismatch: 9, identity: 0.719

gagctggcgaacctgatggcgggcgacgtgga	CRISPR spacer
agtctggcgaccctggtggcgggcgatatcgc	Protospacer
.. ******* ****.**********..* *

81. spacer 1.7|1391258|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to MN586053 (Arthrobacter phage BeatusComedenti, complete genome) position: , mismatch: 9, identity: 0.719

ttgataatcgccagcttgaccagtttggcatc	CRISPR spacer
ttgatgatccccagcttgaccagacgctccac	Protospacer
*****.*** ************* .   *  *

82. spacer 1.7|1391258|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to KT964103 (Klebsiella phage vB_KpnP_KpV41, complete genome) position: , mismatch: 9, identity: 0.719

ttgataatcgccagcttgaccagtttggcatc	CRISPR spacer
tatagggccgccagcttgtccagtttgtcata	Protospacer
*  * ...********** ******** ***

83. spacer 1.7|1391258|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to NC_031254 (Arthrobacter phage Kitkat, complete genome) position: , mismatch: 9, identity: 0.719

ttgataatcgccagcttgaccagtttggcatc	CRISPR spacer
ttgatgatccccagcttgaccagacgctccac	Protospacer
*****.*** ************* .   *  *

84. spacer 2.9|1408141|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP051686 (Duganella sp. GN2-R2 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tgccagtgactacagaagcgtcgctatcgggg	CRISPR spacer
cacgcctgactaccgaagtgtcgctatcggac	Protospacer
..*   ******* ****.***********.

85. spacer 2.1|1407652|32|NZ_CP045754|CRISPRCasFinder,CRT matches to NZ_CP054615 (Azospirillum oryzae strain KACC 14407 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

atcttcatattgcgtgacgctgccgatgaacg	CRISPR spacer
tgccggatatggcgtgacgatgccgatgatgt	Protospacer
  *.  **** ******** *********

86. spacer 2.3|1407774|32|NZ_CP045754|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP044072 (Pseudomonas oryzihabitans strain FDAARGOS_657 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

tgcccgttctgcctcttcgcactctcgatcaa	CRISPR spacer
tgcccgttctgtctcttggcactgccaccttc	Protospacer
***********.***** ***** .*. ..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

504802 : 515418

Morganella_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001157322.1\|504802_506233_-	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	1.0e-104	57.4
WP_017441839.1\|506306_507002_-	phosphohydrolase	A0A1D6Y7U0	Golden_Marseillevirus	2.8e-07	27.1
WP_020839257.1\|507081_507393_-	hypothetical protein	NA	NA	NA	NA
WP_020839256.1\|508042_509254_+	porin	Q1MVN1	Enterobacteria_phage	3.4e-109	56.5
WP_024131163.1\|509513_509702_-	hypothetical protein	NA	NA	NA	NA
WP_000208509.1\|509712_509925_-	cold-shock protein	A0A1W6JNX5	Morganella_phage	3.9e-21	70.0
WP_017465541.1\|510379_511648_-	Y-family DNA polymerase	I6RSM4	Salmonella_phage	3.5e-226	91.7
WP_000394197.1\|511650_512070_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	8.5e-36	60.5
WP_001532308.1\|512196_512358_-	hypothetical protein	NA	NA	NA	NA
WP_017465540.1\|512838_513636_+	DgsA anti-repressor MtfA	NA	NA	NA	NA
WP_001736108.1\|514007_514298_+	DUF4102 domain-containing protein	B7SYF8	Stenotrophomonas_phage	3.0e-08	49.1
WP_017465538.1\|514944_515418_+	peptidase	A0A0F6TJ61	Escherichia_coli_O157_typing_phage	1.6e-38	76.6

DBSCAN-SWA_2

682113 : 691284

Enterobacteria_phage(66.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000195334.1\|682113_684147_+\|tRNA	methionine--tRNA ligase	A0A1V0SDF2	Indivirus	1.0e-54	27.6
WP_000703137.1\|684387_684846_+	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	8.4e-53	72.5
WP_001197951.1\|685017_685548_+	YehR family lipoprotein	NA	NA	NA	NA
WP_000950413.1\|685604_686072_-	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	3.9e-74	90.3
WP_000598637.1\|686118_686838_-	two-component system response regulator BtsR	NA	NA	NA	NA
WP_000272850.1\|686834_688520_-	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	4.8e-279	91.3
WP_001240418.1\|688742_689474_+	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	4.5e-101	87.9
WP_001261696.1\|689533_689641_+	protein YohO	NA	NA	NA	NA
WP_000824854.1\|689621_690353_-	ABC transporter permease	NA	NA	NA	NA
WP_000569168.1\|690336_691284_-	ABC transporter ATP-binding protein	F2Y1V5	Organic_Lake_phycodnavirus	2.8e-10	27.8

DBSCAN-SWA_3

3077012 : 3087666

Enterobacteria_phage(55.56%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000152566.1\|3077012_3078032_-	NAD(P)-dependent alcohol dehydrogenase	A0A0G2Y405	Acanthamoeba_polyphaga_mimivirus	1.7e-42	30.1
WP_020839656.1\|3078502_3079762_+	DUF4102 domain-containing protein	B7SYF8	Stenotrophomonas_phage	3.7e-74	41.2
WP_000970946.1\|3079815_3080811_-	site-specific DNA-methyltransferase	S0A236	Cellulophaga_phage	3.5e-19	24.2
WP_010376679.1\|3080866_3081103_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_020839655.1\|3081099_3081663_+	type II restriction endonuclease PvuII	A0A1B0UXL9	Roseobacter_phage	5.5e-30	42.9
WP_020839654.1\|3081882_3082449_-	phage polarity suppression protein	Q7M2A1	Enterobacteria_phage	2.6e-56	62.7
WP_000984205.1\|3082465_3082711_-	transcriptional regulator	Q7M294	Enterobacteria_phage	1.6e-31	77.8
WP_020839652.1\|3082707_3083445_-	hypothetical protein	Q7M2A2	Enterobacteria_phage	3.1e-81	65.7
WP_020839651.1\|3084225_3084777_+	ash family protein	Q7M2A7	Enterobacteria_phage	1.1e-35	71.3
WP_001604623.1\|3084773_3085001_+	hypothetical protein	NA	NA	NA	NA
WP_000743150.1\|3084997_3085318_+	hypothetical protein	NA	NA	NA	NA
WP_020839650.1\|3085332_3087666_+	DNA primase	Q7M2A8	Enterobacteria_phage	0.0e+00	84.3

DBSCAN-SWA_4

4220738 : 4321666

Enterobacteria_phage(32.69%)

tRNA,holin,transposase,integrase,portal,terminase,tail,lysis,protease,capsid,head

attL 4216182:4216198|attR 4296192:4296208

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4216182:4216198	attL	NA	NA	NA	NA
WP_001154028.1\|4220738_4221542_+\|tRNA	tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM	NA	NA	NA	NA
WP_001288828.1\|4221534_4222857_+	chromosome partition protein MukF	NA	NA	NA	NA
WP_000060025.1\|4222837_4223542_+	chromosome partition protein MukE	NA	NA	NA	NA
WP_017440920.1\|4223541_4228008_+	chromosome partition protein MukB	NA	NA	NA	NA
WP_020839442.1\|4228352_4230176_+	L,D-transpeptidase	NA	NA	NA	NA
WP_000357052.1\|4230435_4230984_+	YcbK family protein	A0A0K1LKR7	Rhodobacter_phage	1.2e-05	33.7
WP_001109471.1\|4231011_4231659_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_000462653.1\|4231720_4232911_-	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA
WP_020839441.1\|4233095_4234187_-	porin OmpF	Q1MVN1	Enterobacteria_phage	2.8e-99	51.5
WP_000117867.1\|4234792_4236193_-\|tRNA	asparagine--tRNA ligase	A0A2K9V902	Bandra_megavirus	4.5e-81	35.8
WP_000762343.1\|4236393_4236855_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
WP_000544857.1\|4237172_4238387_+	diaminopropionate ammonia-lyase	NA	NA	NA	NA
WP_020839440.1\|4238632_4240066_+	sodium:alanine symporter family protein	NA	NA	NA	NA
WP_000191404.1\|4240146_4241349_-	nicotinate phosphoribosyltransferase	NA	NA	NA	NA
WP_001262314.1\|4241543_4242836_-\|integrase	site-specific integrase	S4TSP2	Salmonella_phage	1.3e-252	99.5
WP_000065276.1\|4242880_4243129_-	excisionase family protein	S4TND0	Salmonella_phage	4.7e-42	100.0
WP_001237031.1\|4243169_4243409_-	DUF4060 family protein	S4TR31	Salmonella_phage	2.0e-37	100.0
WP_077906096.1\|4243451_4244609_-	recombinase RecT	S4TTE8	Salmonella_phage	6.7e-216	98.7
WP_000023724.1\|4244571_4247751_-	DNA breaking-rejoining protein	H6WRX1	Salmonella_phage	0.0e+00	68.2
WP_000799631.1\|4247880_4248216_-	hypothetical protein	NA	NA	NA	NA
WP_000613375.1\|4248290_4248575_-	hypothetical protein	K7PGY4	Enterobacteria_phage	1.7e-08	53.2
WP_024135615.1\|4249005_4249185_+	hypothetical protein	NA	NA	NA	NA
WP_001224472.1\|4249628_4250054_-	helix-turn-helix domain-containing protein	K7PH71	Enterobacterial_phage	1.2e-13	56.3
WP_001033909.1\|4250150_4250405_+	helix-turn-helix transcriptional regulator	K7PKH4	Enterobacteria_phage	1.2e-16	59.4
WP_001669257.1\|4250391_4250886_+	hypothetical protein	NA	NA	NA	NA
WP_001617851.1\|4250930_4251794_+	hypothetical protein	A0A088CD36	Shigella_phage	1.2e-31	58.5
WP_000788952.1\|4251800_4252553_+	DNA replication protein DnaC	A0A088CBP4	Shigella_phage	1.7e-103	77.0
WP_000089413.1\|4252570_4252966_+	DUF977 family protein	A0A088CBK9	Shigella_phage	2.0e-18	39.3
WP_001669261.1\|4253395_4253887_+	DUF1076 domain-containing protein	B6DZB9	Enterobacteria_phage	9.7e-23	51.5
WP_024135617.1\|4254106_4254412_+	hypothetical protein	NA	NA	NA	NA
WP_000940758.1\|4254475_4255075_+	DUF1367 family protein	A0A0U2RT94	Escherichia_phage	6.1e-96	82.9
WP_000784707.1\|4255071_4255299_+	DNA breaking-rejoining protein	A0A0M4RU10	Salmonella_phage	6.6e-19	76.8
WP_001617856.1\|4255295_4255442_+	YlcG family protein	A0A0M5M7B2	Salmonella_phage	4.3e-19	97.9
WP_020839436.1\|4255431_4256229_+	antitermination protein	A0A0M4S661	Salmonella_phage	3.4e-150	99.2
WP_001534733.1\|4256627_4256753_+	hypothetical protein	NA	NA	NA	NA
WP_000798706.1\|4256888_4257338_-	lipoprotein	NA	NA	NA	NA
WP_001110788.1\|4257698_4258385_-	PipA/GogA/GtgA family type III secretion system effector	Q9MBM2	Phage_Gifsy-1	5.1e-131	98.7
WP_001574216.1\|4258660_4258990_+\|holin	phage holin, lambda family	A0A0M3ULK9	Salmonella_phage	5.8e-56	100.0
WP_000984587.1\|4258973_4259426_+	lysozyme	A0A0M4R365	Salmonella_phage	5.1e-79	98.0
WP_001533543.1\|4259443_4259896_+\|lysis	lysis protein	A0A0M4RD57	Salmonella_phage	2.9e-66	92.7
WP_000669693.1\|4260131_4260533_-	hypothetical protein	NA	NA	NA	NA
WP_001102153.1\|4260818_4261364_+\|terminase	terminase small subunit	A0A0U2S671	Escherichia_phage	1.5e-56	80.6
WP_000623086.1\|4261335_4263267_+\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	2.0e-257	65.4
WP_000201416.1\|4263250_4263454_+\|head,tail	head-tail joining protein	K7PM10	Enterobacteria_phage	2.1e-16	70.8
WP_000831820.1\|4263450_4265031_+\|portal	phage portal protein	K7P6U7	Enterobacteria_phage	1.2e-188	62.8
WP_001189495.1\|4265020_4266517_+	S49 family peptidase	A0A0K2FI53	Enterobacteria_phage	3.3e-98	52.9
WP_000011260.1\|4266529_4266877_+\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	9.2e-20	52.7
WP_000522566.1\|4266931_4267960_+\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	1.7e-114	61.1
WP_000201486.1\|4268017_4268377_+	DNA packaging protein	NA	NA	NA	NA
WP_000083292.1\|4268387_4268771_+\|tail	tail attachment protein	A0A0K2FJB7	Enterobacteria_phage	1.2e-28	55.6
WP_000817265.1\|4268803_4269934_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	Q9G0F2	Phage_Gifsy-1	4.0e-213	98.1
WP_000677089.1\|4270042_4270621_+\|tail	phage tail protein	A5LH33	Enterobacteria_phage	3.7e-82	80.2
WP_000033885.1\|4270617_4271019_+\|tail	tail protein	Q9G0F3	Phage_Gifsy-1	8.1e-52	100.0
WP_000971954.1\|4271026_4271773_+\|tail	tail protein	A0A291AWU6	Escherichia_phage	1.9e-99	76.9
WP_000479607.1\|4271823_4272219_+\|tail	phage minor tail protein G	A5LH36	Enterobacteria_phage	2.3e-30	56.5
WP_010989052.1\|4272215_4272554_+\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	1.3e-31	62.4
WP_000372075.1\|4272525_4275621_+\|tail	phage tail tape measure protein	A0A291AWX1	Escherichia_phage	4.8e-277	61.7
WP_000447370.1\|4275623_4275953_+\|tail	phage tail protein	A5LH39	Enterobacteria_phage	7.3e-43	71.3
WP_001152686.1\|4275962_4276661_+\|tail	phage minor tail protein L	A0A1B5FP81	Escherichia_phage	1.6e-103	75.9
WP_000662738.1\|4276667_4277405_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	9.8e-128	84.2
WP_001750110.1\|4277302_4277950_+\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	1.6e-89	78.1
WP_000514902.1\|4278011_4281374_+	host specificity protein J	K7PKJ2	Enterobacteria_phage	0.0e+00	79.5
WP_000178849.1\|4281412_4281655_+	hypothetical protein	NA	NA	NA	NA
WP_023193196.1\|4281708_4284204_+\|tail	Gifsy-2 prophage tail fiber protein	E5G6P0	Salmonella_phage	7.3e-159	76.1
WP_000143168.1\|4284203_4284785_+\|tail	tail fiber assembly protein	A0A0M4RTP2	Salmonella_phage	3.3e-94	88.9
WP_010835411.1\|4285614_4287105_-	type III secretion effector GogB	Q9MBM1	Phage_Gifsy-1	1.6e-254	98.6
WP_001536069.1\|4287672_4288473_-	hypothetical protein	NA	NA	NA	NA
WP_000497440.1\|4288948_4289155_-	DinI-like family protein	S4TNM0	Salmonella_phage	1.8e-31	100.0
WP_020839435.1\|4289581_4292194_+	aminopeptidase N	A0A0P0IY26	Acinetobacter_phage	2.2e-20	22.8
WP_000291723.1\|4292401_4293412_+	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA
WP_001220671.1\|4293577_4294120_+	cell division protein ZapC	NA	NA	NA	NA
WP_000224075.1\|4294116_4295226_-	MOSC domain-containing protein	NA	NA	NA	NA
WP_020839434.1\|4295324_4297433_+	bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL	NA	NA	NA	NA
4296192:4296208	attR	NA	NA	NA	NA
WP_000053044.1\|4297445_4299353_+	ABC transporter ATP-binding protein	A0A2K9L3Z8	Tupanvirus	2.4e-53	29.8
WP_000333153.1\|4299367_4300621_+	membrane integrity-associated transporter subunit PqiA	NA	NA	NA	NA
WP_000433416.1\|4300625_4302266_+	intermembrane transport protein PqiB	NA	NA	NA	NA
WP_000759136.1\|4302262_4302826_+	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA
WP_001537784.1\|4303081_4303249_+	ribosome modulation factor	NA	NA	NA	NA
WP_000227928.1\|4303348_4303867_-	bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase	NA	NA	NA	NA
WP_000156448.1\|4303935_4305696_-\|protease	Lon protease family protein	NA	NA	NA	NA
WP_000877172.1\|4305881_4306334_+	macrodomain Ter protein MatP	NA	NA	NA	NA
WP_023193195.1\|4306405_4307458_-	porin OmpA	NA	NA	NA	NA
WP_000288732.1\|4307813_4308323_-	cell division inhibitor SulA	NA	NA	NA	NA
WP_001202375.1\|4308539_4309145_+	TfoX/Sxy family DNA transformation protein	NA	NA	NA	NA
WP_000950869.1\|4309131_4311285_-	TIGR01666 family membrane protein	NA	NA	NA	NA
WP_001261222.1\|4311303_4311750_-	YccF domain-containing protein	NA	NA	NA	NA
WP_023193194.1\|4311873_4313928_+	DNA helicase IV	A7KV33	Bacillus_phage	3.2e-19	27.3
WP_000424187.1\|4313963_4314422_-	methylglyoxal synthase	NA	NA	NA	NA
WP_000847719.1\|4314516_4315179_-	DUF2057 family protein	NA	NA	NA	NA
WP_000975203.1\|4315349_4315766_+	CoA-binding protein	NA	NA	NA	NA
WP_000561983.1\|4315810_4316128_-	heat shock protein HspQ	NA	NA	NA	NA
WP_000140480.1\|4316185_4317397_-	23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI	NA	NA	NA	NA
WP_000859416.1\|4317611_4318160_+	YbhB/YbcL family Raf kinase inhibitor-like protein	NA	NA	NA	NA
WP_017465795.1\|4318185_4318965_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_000072884.1\|4319013_4319295_+	acylphosphatase	NA	NA	NA	NA
WP_000904446.1\|4319291_4319621_-	sulfurtransferase TusE	NA	NA	NA	NA
WP_000374046.1\|4319707_4320367_-\|protease	FtsH protease modulator YccA	A0A2H4JFM9	uncultured_Caudovirales_phage	2.7e-44	52.4
WP_020839432.1\|4320985_4321666_-\|protease	type III secretion system effector protease PipA	Q9MBM0	Phage_Gifsy-2	3.4e-82	71.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP045755

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP045754

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection