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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP043167 Bordetella holmesii strain F594 chromosome, complete genome 0 crisprs cas3,DinG,DEDDh,csa3 0 0 11 0

Results visualization

1. NZ_CP043167
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 917602 : 994820 57 Ralstonia_virus(41.67%) transposase,tRNA NA
DBSCAN-SWA_2 1096603 : 1203392 96 Ralstonia_virus(16.67%) protease,transposase,tRNA NA
DBSCAN-SWA_3 1208179 : 1264585 45 Ralstonia_virus(23.08%) protease,transposase,tRNA NA
DBSCAN-SWA_4 1652956 : 1693309 39 Leptospira_phage(28.57%) transposase,integrase,tRNA attL 1645398:1645414|attR 1690015:1690031
DBSCAN-SWA_5 1711603 : 1755530 37 Leptospira_phage(33.33%) transposase,holin,integrase,tRNA attL 1754098:1754112|attR 1760574:1760588
DBSCAN-SWA_6 1780806 : 1822197 39 Ralstonia_virus(50.0%) transposase NA
DBSCAN-SWA_7 2150411 : 2210534 59 Ralstonia_virus(23.08%) protease,transposase,tRNA NA
DBSCAN-SWA_8 2305657 : 2427168 106 Leptospira_phage(15.15%) protease,transposase,integrase,tRNA attL 2337187:2337246|attR 2358494:2358768
DBSCAN-SWA_9 2472161 : 2535652 49 Ralstonia_virus(25.0%) protease,transposase,tRNA NA
DBSCAN-SWA_10 2567114 : 2633770 58 Leptospira_phage(37.5%) transposase,integrase,tRNA attL 2606577:2606636|attR 2632591:2632948
DBSCAN-SWA_11 2939141 : 3017152 56 Ralstonia_virus(23.08%) protease,transposase,integrase,tRNA attL 2941368:2941427|attR 3014828:3016027
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage