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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP043066 Bordetella holmesii strain J712 chromosome, complete genome 0 crisprs cas3,DinG,DEDDh,csa3 0 0 9 0

Results visualization

1. NZ_CP043066
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1095220 : 1202009 96 Ralstonia_virus(16.67%) transposase,protease,tRNA NA
DBSCAN-SWA_2 1206796 : 1263202 44 Ralstonia_virus(23.08%) transposase,protease,tRNA NA
DBSCAN-SWA_3 1586740 : 1693003 100 Leptospira_phage(14.29%) integrase,transposase,tRNA attL 1644015:1644031|attR 1689681:1689697
DBSCAN-SWA_4 1711297 : 1755224 37 Leptospira_phage(33.33%) integrase,transposase,holin,tRNA attL 1753792:1753806|attR 1760268:1760282
DBSCAN-SWA_5 1780500 : 1821892 38 Ralstonia_virus(50.0%) transposase NA
DBSCAN-SWA_6 2150104 : 2210227 59 Ralstonia_virus(23.08%) transposase,protease,tRNA NA
DBSCAN-SWA_7 2305356 : 2426867 106 Leptospira_phage(15.15%) integrase,transposase,protease,tRNA attL 2336886:2336945|attR 2358193:2358467
DBSCAN-SWA_8 2936309 : 3013369 56 Ralstonia_virus(21.43%) integrase,transposase,tRNA attL 2939164:2939223|attR 2987751:2988321
DBSCAN-SWA_9 3548608 : 3585824 38 Ralstonia_virus(11.11%) transposase,holin,protease,tRNA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage