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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP042213 Enterococcus faecalis strain L15 chromosome, complete genome 5 crisprs csa3,cas3,cas9,cas1,cas2,csn2,cas14j,DinG,DEDDh,RT 1 10 9 4
NZ_CP042215 Enterococcus faecalis strain L15 plasmid pL15-A, complete sequence 0 crisprs NA 0 0 4 0
NZ_CP042214 Enterococcus faecalis strain L15 plasmid pL15, complete sequence 0 crisprs NA 0 0 1 0

Results visualization

1. NZ_CP042213
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP042213_1 526927-527426 TypeII II-A,II-B
7 spacers
csn2,cas2,cas1,cas9

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP042213_2 892435-892529 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP042213_3 1815279-1815710 Orphan II-A,II-B
6 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP042213_4 1835216-1835326 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP042213_5 2716570-2716643 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP042213_1 1.2|527031|30|NZ_CP042213|CRISPRCasFinder,CRT 527031-527060 30 NZ_CP042213.1 2294886-2294915 1 0.967

1. spacer 1.2|527031|30|NZ_CP042213|CRISPRCasFinder,CRT matches to position: 2294886-2294915, mismatch: 1, identity: 0.967

cagcgccggaaaagtagcaagccccacagt	CRISPR spacer
cagcgccggaaaagtagcaatccccacagt	Protospacer
******************** *********

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP042213_3 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT 1815315-1815344 30 MF157411 Escherichia coli strain EC1000 plasmid pCR2, complete sequence 304-333 0 1.0
NZ_CP042213_3 3.5|1815579|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR 1815579-1815608 30 NC_028671 Enterococcus phage vB_EfaS_IME197, complete genome 35468-35497 1 0.967
NZ_CP042213_3 3.4|1815513|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR 1815513-1815542 30 CP016195 Bacillus thuringiensis serovar coreanensis strain ST7 plasmid pST7-1, complete sequence 223010-223039 5 0.833
NZ_CP042213_1 1.4|527163|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR 527163-527192 30 NZ_CP043436 Campylobacter fetus subsp. venerealis NCTC 10354 plasmid p3226, complete sequence 10209-10238 6 0.8
NZ_CP042213_1 1.4|527163|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR 527163-527192 30 NZ_CP014570 Campylobacter fetus subsp. venerealis strain 01/165 plasmid mp2, complete sequence 14813-14842 6 0.8
NZ_CP042213_1 1.4|527163|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR 527163-527192 30 NZ_CP008809 Campylobacter fetus subsp. fetus 04/554 plasmid pCFF04554, complete sequence 2921-2950 6 0.8
NZ_CP042213_1 1.4|527163|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR 527163-527192 30 NZ_CP008812 Campylobacter fetus subsp. venerealis 97/608 plasmid pCFV97608-2, complete sequence 10382-10411 6 0.8
NZ_CP042213_3 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT 1815315-1815344 30 MK496783 Capybara microvirus Cap3_SP_410, complete genome 3412-3441 6 0.8
NZ_CP042213_3 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT 1815315-1815344 30 MN693358 Marine virus AFVG_25M395, complete genome 6141-6170 6 0.8
NZ_CP042213_3 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT 1815315-1815344 30 MN694190 Marine virus AFVG_250M608, complete genome 30089-30118 6 0.8
NZ_CP042213_3 3.2|1815381|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR 1815381-1815410 30 KJ608189 UNVERIFIED: Leuconostoc phage LLC-1, partial genome 10095-10124 6 0.8
NZ_CP042213_3 3.4|1815513|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR 1815513-1815542 30 MH319764 Marine virus AG-345-P14 Ga0172274_11 genomic sequence 11101-11130 6 0.8
NZ_CP042213_3 3.5|1815579|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR 1815579-1815608 30 NC_019735 Crinalium epipsammum PCC 9333 plasmid pCRI9333.04, complete sequence 24640-24669 6 0.8
NZ_CP042213_1 1.7|527361|30|NZ_CP042213|CRISPRCasFinder,CRT 527361-527390 30 NZ_CP031270 Staphylococcus warneri strain 16A plasmid unnamed1, complete sequence 9754-9783 7 0.767
NZ_CP042213_1 1.7|527361|30|NZ_CP042213|CRISPRCasFinder,CRT 527361-527390 30 NZ_CP031270 Staphylococcus warneri strain 16A plasmid unnamed1, complete sequence 20272-20301 7 0.767
NZ_CP042213_3 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT 1815315-1815344 30 NC_014502 Gloeothece verrucosa PCC 7822 plasmid Cy782203, complete sequence 268334-268363 7 0.767
NZ_CP042213_3 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT 1815315-1815344 30 NZ_CP032754 Lactobacillus plantarum subsp. argentoratensis strain DSM 16365 plasmid unnamed3, complete sequence 26827-26856 7 0.767
NZ_CP042213_3 3.4|1815513|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR 1815513-1815542 30 CP034667 Proteus vulgaris strain PvSC3 plasmid pPvSC3, complete sequence 88090-88119 7 0.767
NZ_CP042213_3 3.4|1815513|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR 1815513-1815542 30 NC_025249 Lactococcus lactis subsp. cremoris MG1363 plasmid pFI430, complete sequence 26320-26349 7 0.767
NZ_CP042213_3 3.5|1815579|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR 1815579-1815608 30 MN855764 Siphoviridae sp. isolate 508, partial genome 26661-26690 7 0.767
NZ_CP042213_3 3.6|1815645|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR 1815645-1815674 30 MN103543 Pseudomonas phage vB_PaeM_PS119XW, complete genome 289766-289795 7 0.767
NZ_CP042213_1 1.3|527097|30|NZ_CP042213|CRISPRCasFinder,CRT 527097-527126 30 NZ_CP010111 Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence 134723-134752 8 0.733
NZ_CP042213_1 1.5|527229|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR 527229-527258 30 NZ_CP053022 Sphingobium yanoikuyae strain YC-XJ2 plasmid p-A-Sy, complete sequence 219326-219355 8 0.733
NZ_CP042213_1 1.5|527229|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR 527229-527258 30 NZ_CP053224 Sphingobium sp. RSMS plasmid pRSMS1, complete sequence 48396-48425 8 0.733
NZ_CP042213_1 1.5|527229|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR 527229-527258 30 NZ_CP020539 Sphingobium herbicidovorans strain MH plasmid pMSHV, complete sequence 710636-710665 8 0.733
NZ_CP042213_1 1.7|527361|30|NZ_CP042213|CRISPRCasFinder,CRT 527361-527390 30 NZ_CP031904 Escherichia coli O104:H4 strain FWSEC0009 plasmid unnamed19, complete sequence 60569-60598 8 0.733
NZ_CP042213_1 1.7|527361|30|NZ_CP042213|CRISPRCasFinder,CRT 527361-527390 30 NC_018654 Escherichia coli O104:H4 str. 2009EL-2050 plasmid pAA-09EL50, complete sequence 17881-17910 8 0.733
NZ_CP042213_1 1.7|527361|30|NZ_CP042213|CRISPRCasFinder,CRT 527361-527390 30 NZ_CP023530 Escherichia coli strain FDAARGOS_401 plasmid unnamed, complete sequence 6482-6511 8 0.733
NZ_CP042213_1 1.7|527361|30|NZ_CP042213|CRISPRCasFinder,CRT 527361-527390 30 NZ_CP041001 Escherichia coli strain FDAARGOS_772 plasmid unnamed1, complete sequence 63459-63488 8 0.733
NZ_CP042213_1 1.7|527361|30|NZ_CP042213|CRISPRCasFinder,CRT 527361-527390 30 CP025574 Escherichia coli strain E-1246 plasmid pE1246_1, complete sequence 51314-51343 8 0.733
NZ_CP042213_1 1.7|527361|30|NZ_CP042213|CRISPRCasFinder,CRT 527361-527390 30 NZ_CP023533 Escherichia coli strain FDAARGOS_403 plasmid unnamed2, complete sequence 24355-24384 8 0.733
NZ_CP042213_1 1.7|527361|30|NZ_CP042213|CRISPRCasFinder,CRT 527361-527390 30 NZ_CP027392 Escherichia coli O104:H4 strain FDAARGOS_349 plasmid unnamed2, complete sequence 4511-4540 8 0.733
NZ_CP042213_1 1.7|527361|30|NZ_CP042213|CRISPRCasFinder,CRT 527361-527390 30 NZ_CP023062 Escherichia coli strain FORC_069 plasmid pFORC69, complete sequence 55180-55209 8 0.733
NZ_CP042213_1 1.7|527361|30|NZ_CP042213|CRISPRCasFinder,CRT 527361-527390 30 NZ_CP023552 Escherichia coli strain FORC_043 plasmid pFORC43, complete sequence 47364-47393 8 0.733
NZ_CP042213_1 1.7|527361|30|NZ_CP042213|CRISPRCasFinder,CRT 527361-527390 30 NZ_KY706108 Escherichia coli strain pAA-ST131 plasmid ESBL20150001, complete sequence 60040-60069 8 0.733
NZ_CP042213_1 1.7|527361|30|NZ_CP042213|CRISPRCasFinder,CRT 527361-527390 30 NC_011752 Escherichia coli 55989 plasmid 55989p, complete sequence 49973-50002 8 0.733
NZ_CP042213_1 1.7|527361|30|NZ_CP042213|CRISPRCasFinder,CRT 527361-527390 30 CP042952 Escherichia coli strain D8-1 plasmid pD8-1_1, complete sequence 67474-67503 8 0.733
NZ_CP042213_1 1.7|527361|30|NZ_CP042213|CRISPRCasFinder,CRT 527361-527390 30 NZ_CP026724 Escherichia coli strain 266917_2 plasmid p266917_2_01, complete sequence 101148-101177 8 0.733
NZ_CP042213_1 1.7|527361|30|NZ_CP042213|CRISPRCasFinder,CRT 527361-527390 30 CP051693 Escherichia coli strain SCU-318 plasmid pSCU-318-1, complete sequence 31503-31532 8 0.733
NZ_CP042213_1 1.7|527361|30|NZ_CP042213|CRISPRCasFinder,CRT 527361-527390 30 NC_019000 Escherichia coli plasmid pHUSEC41-2, complete sequence 51056-51085 8 0.733
NZ_CP042213_1 1.7|527361|30|NZ_CP042213|CRISPRCasFinder,CRT 527361-527390 30 NZ_CP009053 Escherichia coli NCCP15648 plasmid p15648-3, complete sequence 55603-55632 8 0.733
NZ_CP042213_1 1.7|527361|30|NZ_CP042213|CRISPRCasFinder,CRT 527361-527390 30 NC_018666 Escherichia coli O104:H4 str. 2011C-3493 plasmid pAA-EA11, complete sequence 10746-10775 8 0.733
NZ_CP042213_1 1.7|527361|30|NZ_CP042213|CRISPRCasFinder,CRT 527361-527390 30 NC_018662 Escherichia coli O104:H4 str. 2009EL-2071 plasmid pAA-09EL71, complete sequence 58558-58587 8 0.733
NZ_CP042213_1 1.7|527361|30|NZ_CP042213|CRISPRCasFinder,CRT 527361-527390 30 NZ_CP013186 Escherichia coli strain FORC_029 plasmid FORC_029p, complete sequence 39899-39928 8 0.733
NZ_CP042213_1 1.7|527361|30|NZ_CP042213|CRISPRCasFinder,CRT 527361-527390 30 NZ_CP022087 Escherichia coli O104:H4 strain FDAARGOS_348 plasmid unnamed2, complete sequence 40046-40075 8 0.733
NZ_CP042213_1 1.7|527361|30|NZ_CP042213|CRISPRCasFinder,CRT 527361-527390 30 CP049615 Escherichia coli O157:H7 strain K1516 plasmid pK1516-3, complete sequence 17811-17840 8 0.733
NZ_CP042213_1 1.7|527361|30|NZ_CP042213|CRISPRCasFinder,CRT 527361-527390 30 NC_022743 Escherichia coli plasmid pHUSEC2011-2, complete sequence 53979-54008 8 0.733
NZ_CP042213_1 1.7|527361|30|NZ_CP042213|CRISPRCasFinder,CRT 527361-527390 30 KU886273 Freshwater phage uvFW-CGR-AMD-COM-C455, complete genome 26680-26709 8 0.733
NZ_CP042213_3 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT 1815315-1815344 30 NZ_CP028270 Pediococcus pentosaceus strain SRCM102740 plasmid unnamed1, complete sequence 22740-22769 8 0.733
NZ_CP042213_3 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT 1815315-1815344 30 NZ_CP028267 Pediococcus pentosaceus strain SRCM102739 plasmid unnamed1, complete sequence 9446-9475 8 0.733
NZ_CP042213_3 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT 1815315-1815344 30 NZ_CP015919 Pediococcus pentosaceus strain wikim20 plasmid pKPP01, complete sequence 11178-11207 8 0.733
NZ_CP042213_3 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT 1815315-1815344 30 NZ_CP021931 Lactobacillus plantarum strain TMW 1.1308 plasmid pL11308-1, complete sequence 27801-27830 8 0.733
NZ_CP042213_3 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT 1815315-1815344 30 NZ_CP024059 Lactobacillus plantarum strain KACC 92189 plasmid unnamed1 53320-53349 8 0.733
NZ_CP042213_3 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT 1815315-1815344 30 NZ_CP028265 Pediococcus pentosaceus strain SRCM102738 plasmid unnamed1, complete sequence 32031-32060 8 0.733
NZ_CP042213_3 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT 1815315-1815344 30 NZ_CP018326 Lactobacillus plantarum subsp. plantarum strain TS12 plasmid pLP12-2, complete sequence 38976-39005 8 0.733
NZ_CP042213_3 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT 1815315-1815344 30 NZ_CP019582 Lactobacillus helveticus strain LH5 plasmid pCBTLH5_1, complete sequence 10189-10218 8 0.733
NZ_CP042213_3 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT 1815315-1815344 30 NZ_CP035308 Lactobacillus helveticus strain IDCC3801 plasmid pHel23910, complete sequence 20537-20566 8 0.733
NZ_CP042213_3 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT 1815315-1815344 30 NZ_CP029972 Lactobacillus kefiri strain DH5 plasmid pDH5, complete sequence 6123-6152 8 0.733
NZ_CP042213_3 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT 1815315-1815344 30 NZ_CP029967 Lactobacillus curvatus strain ZJUNIT8 plasmid pnunamed1, complete sequence 28417-28446 8 0.733
NZ_CP042213_3 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT 1815315-1815344 30 LT615366 Enterococcus phage VPE25 genome assembly, chromosome: VPE25 14742-14771 8 0.733
NZ_CP042213_3 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT 1815315-1815344 30 LT546029 Enterococcus phage VFW genome assembly, chromosome: VFW 14675-14704 8 0.733
NZ_CP042213_3 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT 1815315-1815344 30 LT546030 Enterococcus phage VPE25 genome assembly, chromosome: I 14742-14771 8 0.733
NZ_CP042213_3 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT 1815315-1815344 30 MT119360 Enterococcus phage nattely, complete genome 14821-14850 8 0.733
NZ_CP042213_3 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT 1815315-1815344 30 NZ_CP037431 Lactobacillus plantarum strain EM plasmid pEM2, complete sequence 20908-20937 8 0.733
NZ_CP042213_3 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT 1815315-1815344 30 NZ_CP025692 Lactobacillus plantarum strain IRG1 plasmid pIRG102, complete sequence 133-162 8 0.733
NZ_CP042213_3 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT 1815315-1815344 30 NZ_CP035559 Lactobacillus plantarum strain SRCM103297 plasmid unnamed3 24727-24756 8 0.733
NZ_CP042213_3 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT 1815315-1815344 30 NZ_CP035572 Lactobacillus plantarum strain SRCM103303 plasmid unnamed1 22589-22618 8 0.733
NZ_CP042213_3 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT 1815315-1815344 30 NZ_CP035175 Lactobacillus plantarum strain SRCM103426 plasmid unnamed1 87952-87981 8 0.733
NZ_CP042213_3 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT 1815315-1815344 30 NZ_CP018327 Lactobacillus plantarum subsp. plantarum strain TS12 plasmid pLP12-3, complete sequence 992-1021 8 0.733
NZ_CP042213_3 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT 1815315-1815344 30 NZ_CP035116 Lactobacillus plantarum strain SRCM103295 plasmid unnamed3 94597-94626 8 0.733
NZ_CP042213_3 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT 1815315-1815344 30 NZ_CP018798 Lactobacillus parabuchneri strain FAM21731 plasmid pFAM21731.2, complete sequence 27103-27132 8 0.733
NZ_CP042213_3 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT 1815315-1815344 30 NZ_CP025415 Lactobacillus plantarum strain X7021 plasmid unnamed3, complete sequence 13215-13244 8 0.733
NZ_CP042213_3 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT 1815315-1815344 30 NZ_CP021928 Pediococcus pentosaceus strain SRCM100194 plasmid pPP194-2, complete sequence 6938-6967 8 0.733
NZ_CP042213_3 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT 1815315-1815344 30 NZ_CP035145 Lactobacillus plantarum strain SRCM103357 plasmid unnamed2 36987-37016 8 0.733
NZ_CP042213_3 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT 1815315-1815344 30 NZ_CP050806 Lactobacillus plantarum strain SPC-SNU 72-2 plasmid pLBP752, complete sequence 19494-19523 8 0.733
NZ_CP042213_3 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT 1815315-1815344 30 NZ_CP028277 Lactobacillus plantarum strain SRCM100995 plasmid unnamed2, complete sequence 54324-54353 8 0.733
NZ_CP042213_3 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT 1815315-1815344 30 NZ_CP013152 Lactobacillus plantarum strain MF1298 plasmid pMF1298-4, complete sequence 22761-22790 8 0.733
NZ_CP042213_3 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT 1815315-1815344 30 MT119361 Enterococus phage vipetofem, complete genome 70537-70566 8 0.733
NZ_CP042213_3 3.2|1815381|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR 1815381-1815410 30 NZ_CP046399 Bacillus sp. A260 plasmid unnamed11, complete sequence 84398-84427 8 0.733
NZ_CP042213_3 3.2|1815381|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR 1815381-1815410 30 KT852578 Bacillus phage BMBtp1, complete genome 15755-15784 8 0.733
NZ_CP042213_3 3.4|1815513|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR 1815513-1815542 30 NZ_CP013139 Pseudoalteromonas sp. Bsw20308 plasmid pPBSW1, complete sequence 100420-100449 8 0.733
NZ_CP042213_3 3.4|1815513|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR 1815513-1815542 30 MN693692 Marine virus AFVG_250M675, complete genome 38024-38053 8 0.733
NZ_CP042213_3 3.5|1815579|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR 1815579-1815608 30 AP017992 Planktothrix agardhii NIES-204 plasmid plasmid1 DNA, complete sequence 63387-63416 8 0.733
NZ_CP042213_3 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT 1815315-1815344 30 NZ_CP047122 Lactobacillus hilgardii strain FLUB plasmid unnamed1 39415-39444 9 0.7
NZ_CP042213_3 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT 1815315-1815344 30 KM359505 Prochlorococcus phage P-TIM68, complete genome 108590-108619 9 0.7
NZ_CP042213_3 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT 1815315-1815344 30 KY971610 Pseudomonas phage PspYZU05, complete genome 121642-121671 9 0.7
NZ_CP042213_3 3.2|1815381|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR 1815381-1815410 30 NZ_CP018746 Borreliella garinii strain CIP 103362 isolate 20047 plasmid unnamed1 5295-5324 9 0.7
NZ_CP042213_3 3.2|1815381|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR 1815381-1815410 30 NZ_CP028865 Borreliella garinii strain 20047 plasmid lp36, complete sequence 31704-31733 9 0.7
NZ_CP042213_3 3.2|1815381|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR 1815381-1815410 30 NC_001856 Borreliella burgdorferi B31 plasmid lp38, complete sequence 5294-5323 9 0.7
NZ_CP042213_3 3.2|1815381|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR 1815381-1815410 30 NZ_CP019853 Borreliella burgdorferi plasmid lp38, complete sequence 5294-5323 9 0.7
NZ_CP042213_3 3.2|1815381|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR 1815381-1815410 30 NZ_CP019764 Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_lp38, complete sequence 5294-5323 9 0.7
NZ_CP042213_3 3.2|1815381|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR 1815381-1815410 30 NC_017240 Borreliella afzelii PKo plasmid lp32-10, complete sequence 24097-24126 9 0.7
NZ_CP042213_3 3.6|1815645|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR 1815645-1815674 30 NC_031070 Bacillus phage Nemo, complete genome 41580-41609 9 0.7
NZ_CP042213_3 3.6|1815645|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR 1815645-1815674 30 MK599315 Pseudomonas phage PA1C, complete genome 289790-289819 9 0.7
NZ_CP042213_3 3.6|1815645|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR 1815645-1815674 30 MH638311 Bacillus phage OmnioDeoPrimus, complete genome 41513-41542 9 0.7
NZ_CP042213_3 3.6|1815645|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR 1815645-1815674 30 MF288918 Bacillus phage Bubs, complete genome 41610-41639 9 0.7
NZ_CP042213_3 3.6|1815645|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR 1815645-1815674 30 MN693104 Marine virus AFVG_25M237, complete genome 15240-15269 9 0.7
NZ_CP042213_1 1.1|526963|32|NZ_CP042213|CRISPRCasFinder,CRT 526963-526994 32 NC_020062 Rhizobium tropici CIAT 899 plasmid pRtrCIAT899c, complete sequence 1915425-1915456 10 0.688

1. spacer 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT matches to MF157411 (Escherichia coli strain EC1000 plasmid pCR2, complete sequence) position: , mismatch: 0, identity: 1.0

aggggagaaaaagccaaatcaaaaaagttt	CRISPR spacer
aggggagaaaaagccaaatcaaaaaagttt	Protospacer
******************************

2. spacer 3.5|1815579|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR matches to NC_028671 (Enterococcus phage vB_EfaS_IME197, complete genome) position: , mismatch: 1, identity: 0.967

gcatcaatcaaaattccctcaatcacataa	CRISPR spacer
gcatcaatcaaaattccctcgatcacataa	Protospacer
********************.*********

3. spacer 3.4|1815513|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR matches to CP016195 (Bacillus thuringiensis serovar coreanensis strain ST7 plasmid pST7-1, complete sequence) position: , mismatch: 5, identity: 0.833

aagcaagaatagtaagaactacaaaaatgc	CRISPR spacer
aacgaagaagagtaagtactacaaaaatga	Protospacer
**  ***** ****** ************ 

4. spacer 1.4|527163|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP043436 (Campylobacter fetus subsp. venerealis NCTC 10354 plasmid p3226, complete sequence) position: , mismatch: 6, identity: 0.8

tgttttaaattcatacataacgaaacatgt-	CRISPR spacer
tgttttaaattcatccataac-atttatatt	Protospacer
************** ****** *  .**.* 

5. spacer 1.4|527163|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014570 (Campylobacter fetus subsp. venerealis strain 01/165 plasmid mp2, complete sequence) position: , mismatch: 6, identity: 0.8

tgttttaaattcatacataacgaaacatgt-	CRISPR spacer
tgttttaaattcatccataac-atttatatt	Protospacer
************** ****** *  .**.* 

6. spacer 1.4|527163|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP008809 (Campylobacter fetus subsp. fetus 04/554 plasmid pCFF04554, complete sequence) position: , mismatch: 6, identity: 0.8

tgttttaaattcatacataacgaaacatgt-	CRISPR spacer
tgttttaaattcatccataac-atttatatt	Protospacer
************** ****** *  .**.* 

7. spacer 1.4|527163|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP008812 (Campylobacter fetus subsp. venerealis 97/608 plasmid pCFV97608-2, complete sequence) position: , mismatch: 6, identity: 0.8

tgttttaaattcatacataacgaaacatgt-	CRISPR spacer
tgttttaaattcatccataac-atttatatt	Protospacer
************** ****** *  .**.* 

8. spacer 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT matches to MK496783 (Capybara microvirus Cap3_SP_410, complete genome) position: , mismatch: 6, identity: 0.8

aggggagaaaaagccaaatcaaaaaagttt	CRISPR spacer
agggcagaaaaagccaaatcaagaattatc	Protospacer
**** *****************.**   *.

9. spacer 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT matches to MN693358 (Marine virus AFVG_25M395, complete genome) position: , mismatch: 6, identity: 0.8

aggggagaaaaagccaaatcaaaaaagttt	CRISPR spacer
aacgcacaaaaagcccaatcaaaaaagatt	Protospacer
*. * * ******** *********** **

10. spacer 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT matches to MN694190 (Marine virus AFVG_250M608, complete genome) position: , mismatch: 6, identity: 0.8

aggggagaaaaagccaaatcaaaaaagttt	CRISPR spacer
tggagtgcgaaagccaaatcaaaaaaggtt	Protospacer
 **.* * .****************** **

11. spacer 3.2|1815381|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR matches to KJ608189 (UNVERIFIED: Leuconostoc phage LLC-1, partial genome) position: , mismatch: 6, identity: 0.8

tgtttttaatattgccgtcttttaaataag	CRISPR spacer
cgtttataatattgccgtctttgtcagaag	Protospacer
.**** ****************   * ***

12. spacer 3.4|1815513|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR matches to MH319764 (Marine virus AG-345-P14 Ga0172274_11 genomic sequence) position: , mismatch: 6, identity: 0.8

aagcaagaatagtaagaact-acaaaaatgc	CRISPR spacer
aagcaagaatagaaagaactaacatgggtg-	Protospacer
************ ******* *** ...** 

13. spacer 3.5|1815579|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR matches to NC_019735 (Crinalium epipsammum PCC 9333 plasmid pCRI9333.04, complete sequence) position: , mismatch: 6, identity: 0.8

gcatcaatcaaaattccctcaatcacataa	CRISPR spacer
gcatcaatcagaatttcctcaatagcttca	Protospacer
**********.****.******* .* * *

14. spacer 1.7|527361|30|NZ_CP042213|CRISPRCasFinder,CRT matches to NZ_CP031270 (Staphylococcus warneri strain 16A plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

tctaatgagcattcattacatatgtagaac	CRISPR spacer
ttaaatgagcattcattacttatatacatt	Protospacer
*. **************** ***.** * .

15. spacer 1.7|527361|30|NZ_CP042213|CRISPRCasFinder,CRT matches to NZ_CP031270 (Staphylococcus warneri strain 16A plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

tctaatgagcattcattacatatgtagaac	CRISPR spacer
ttaaatgagcattcattacttatatacatt	Protospacer
*. **************** ***.** * .

16. spacer 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT matches to NC_014502 (Gloeothece verrucosa PCC 7822 plasmid Cy782203, complete sequence) position: , mismatch: 7, identity: 0.767

aggggagaaaaagccaaatcaaaaaagttt	CRISPR spacer
aatcaacaaaaagccaaaacaaaaaagtta	Protospacer
*.  .* *********** ********** 

17. spacer 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT matches to NZ_CP032754 (Lactobacillus plantarum subsp. argentoratensis strain DSM 16365 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.767

aggggagaaaaagccaaatcaaaaaagttt	CRISPR spacer
aattgagaaaaaggcaaatcaaaaatttct	Protospacer
*.  ********* ***********  *.*

18. spacer 3.4|1815513|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR matches to CP034667 (Proteus vulgaris strain PvSC3 plasmid pPvSC3, complete sequence) position: , mismatch: 7, identity: 0.767

aagcaagaatagtaagaactacaaaaatgc	CRISPR spacer
atgagtaaaaagtaagaactacaaaaatgg	Protospacer
* * . .** ******************* 

19. spacer 3.4|1815513|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR matches to NC_025249 (Lactococcus lactis subsp. cremoris MG1363 plasmid pFI430, complete sequence) position: , mismatch: 7, identity: 0.767

aagcaagaatagtaagaactacaaaaatgc	CRISPR spacer
attaaagaaaaggaagaactacaaaaatcg	Protospacer
*   ***** ** ***************  

20. spacer 3.5|1815579|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR matches to MN855764 (Siphoviridae sp. isolate 508, partial genome) position: , mismatch: 7, identity: 0.767

gcatcaatcaaaattccctcaatcacataa	CRISPR spacer
gaacttaagaaaattcactcaatcacataa	Protospacer
* *.. *  ******* *************

21. spacer 3.6|1815645|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR matches to MN103543 (Pseudomonas phage vB_PaeM_PS119XW, complete genome) position: , mismatch: 7, identity: 0.767

gaagatggtagcgaagttattgtaaatccc	CRISPR spacer
atagatggtagtaaagttattgtaattgac	Protospacer
. *********..************ *  *

22. spacer 1.3|527097|30|NZ_CP042213|CRISPRCasFinder,CRT matches to NZ_CP010111 (Bacillus thuringiensis serovar indiana strain HD521 plasmid pBTHD521-5, complete sequence) position: , mismatch: 8, identity: 0.733

acgtgccttcaaatccaaaaaaggtttgtt	CRISPR spacer
aaacaacttcaaatcctaaaaaggattgta	Protospacer
* ... ********** ******* **** 

23. spacer 1.5|527229|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053022 (Sphingobium yanoikuyae strain YC-XJ2 plasmid p-A-Sy, complete sequence) position: , mismatch: 8, identity: 0.733

ttagaaaa---gacgtgacagagcaaacagcgc	CRISPR spacer
---gagcgtctgacgtgacagaggaaacagcga	Protospacer
   **. .   ************ ******** 

24. spacer 1.5|527229|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053224 (Sphingobium sp. RSMS plasmid pRSMS1, complete sequence) position: , mismatch: 8, identity: 0.733

ttagaaaa---gacgtgacagagcaaacagcgc	CRISPR spacer
---gagcgtctgacgtgacagaggaaacagcga	Protospacer
   **. .   ************ ******** 

25. spacer 1.5|527229|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020539 (Sphingobium herbicidovorans strain MH plasmid pMSHV, complete sequence) position: , mismatch: 8, identity: 0.733

ttagaaaa---gacgtgacagagcaaacagcgc	CRISPR spacer
---gagcgtctgacgtgacagaggaaacagcga	Protospacer
   **. .   ************ ******** 

26. spacer 1.7|527361|30|NZ_CP042213|CRISPRCasFinder,CRT matches to NZ_CP031904 (Escherichia coli O104:H4 strain FWSEC0009 plasmid unnamed19, complete sequence) position: , mismatch: 8, identity: 0.733

tctaatgagcattcattacatatgtagaac	CRISPR spacer
caaaatcagcattcattacatatgtaacta	Protospacer
.  *** *******************.   

27. spacer 1.7|527361|30|NZ_CP042213|CRISPRCasFinder,CRT matches to NC_018654 (Escherichia coli O104:H4 str. 2009EL-2050 plasmid pAA-09EL50, complete sequence) position: , mismatch: 8, identity: 0.733

tctaatgagcattcattacatatgtagaac	CRISPR spacer
caaaatcagcattcattacatatgtaacta	Protospacer
.  *** *******************.   

28. spacer 1.7|527361|30|NZ_CP042213|CRISPRCasFinder,CRT matches to NZ_CP023530 (Escherichia coli strain FDAARGOS_401 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

tctaatgagcattcattacatatgtagaac	CRISPR spacer
caaaatcagcattcattacatatgtaacta	Protospacer
.  *** *******************.   

29. spacer 1.7|527361|30|NZ_CP042213|CRISPRCasFinder,CRT matches to NZ_CP041001 (Escherichia coli strain FDAARGOS_772 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

tctaatgagcattcattacatatgtagaac	CRISPR spacer
caaaatcagcattcattacatatgtaacta	Protospacer
.  *** *******************.   

30. spacer 1.7|527361|30|NZ_CP042213|CRISPRCasFinder,CRT matches to CP025574 (Escherichia coli strain E-1246 plasmid pE1246_1, complete sequence) position: , mismatch: 8, identity: 0.733

tctaatgagcattcattacatatgtagaac	CRISPR spacer
caaaatcagcattcattacatatgtaacta	Protospacer
.  *** *******************.   

31. spacer 1.7|527361|30|NZ_CP042213|CRISPRCasFinder,CRT matches to NZ_CP023533 (Escherichia coli strain FDAARGOS_403 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.733

tctaatgagcattcattacatatgtagaac	CRISPR spacer
caaaatcagcattcattacatatgtaacta	Protospacer
.  *** *******************.   

32. spacer 1.7|527361|30|NZ_CP042213|CRISPRCasFinder,CRT matches to NZ_CP027392 (Escherichia coli O104:H4 strain FDAARGOS_349 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.733

tctaatgagcattcattacatatgtagaac	CRISPR spacer
caaaatcagcattcattacatatgtaacta	Protospacer
.  *** *******************.   

33. spacer 1.7|527361|30|NZ_CP042213|CRISPRCasFinder,CRT matches to NZ_CP023062 (Escherichia coli strain FORC_069 plasmid pFORC69, complete sequence) position: , mismatch: 8, identity: 0.733

tctaatgagcattcattacatatgtagaac	CRISPR spacer
caaaatcagcattcattacatatgtaacta	Protospacer
.  *** *******************.   

34. spacer 1.7|527361|30|NZ_CP042213|CRISPRCasFinder,CRT matches to NZ_CP023552 (Escherichia coli strain FORC_043 plasmid pFORC43, complete sequence) position: , mismatch: 8, identity: 0.733

tctaatgagcattcattacatatgtagaac	CRISPR spacer
caaaatcagcattcattacatatgtaacta	Protospacer
.  *** *******************.   

35. spacer 1.7|527361|30|NZ_CP042213|CRISPRCasFinder,CRT matches to NZ_KY706108 (Escherichia coli strain pAA-ST131 plasmid ESBL20150001, complete sequence) position: , mismatch: 8, identity: 0.733

tctaatgagcattcattacatatgtagaac	CRISPR spacer
caaaatcagcattcattacatatgtaacta	Protospacer
.  *** *******************.   

36. spacer 1.7|527361|30|NZ_CP042213|CRISPRCasFinder,CRT matches to NC_011752 (Escherichia coli 55989 plasmid 55989p, complete sequence) position: , mismatch: 8, identity: 0.733

tctaatgagcattcattacatatgtagaac	CRISPR spacer
caaaatcagcattcattacatatgtaacta	Protospacer
.  *** *******************.   

37. spacer 1.7|527361|30|NZ_CP042213|CRISPRCasFinder,CRT matches to CP042952 (Escherichia coli strain D8-1 plasmid pD8-1_1, complete sequence) position: , mismatch: 8, identity: 0.733

tctaatgagcattcattacatatgtagaac	CRISPR spacer
caaaatcagcattcattacatatgtaacta	Protospacer
.  *** *******************.   

38. spacer 1.7|527361|30|NZ_CP042213|CRISPRCasFinder,CRT matches to NZ_CP026724 (Escherichia coli strain 266917_2 plasmid p266917_2_01, complete sequence) position: , mismatch: 8, identity: 0.733

tctaatgagcattcattacatatgtagaac	CRISPR spacer
caaaatcagcattcattacatatgtaacta	Protospacer
.  *** *******************.   

39. spacer 1.7|527361|30|NZ_CP042213|CRISPRCasFinder,CRT matches to CP051693 (Escherichia coli strain SCU-318 plasmid pSCU-318-1, complete sequence) position: , mismatch: 8, identity: 0.733

tctaatgagcattcattacatatgtagaac	CRISPR spacer
caaaatcagcattcattacatatgtaacta	Protospacer
.  *** *******************.   

40. spacer 1.7|527361|30|NZ_CP042213|CRISPRCasFinder,CRT matches to NC_019000 (Escherichia coli plasmid pHUSEC41-2, complete sequence) position: , mismatch: 8, identity: 0.733

tctaatgagcattcattacatatgtagaac	CRISPR spacer
caaaatcagcattcattacatatgtaacta	Protospacer
.  *** *******************.   

41. spacer 1.7|527361|30|NZ_CP042213|CRISPRCasFinder,CRT matches to NZ_CP009053 (Escherichia coli NCCP15648 plasmid p15648-3, complete sequence) position: , mismatch: 8, identity: 0.733

tctaatgagcattcattacatatgtagaac	CRISPR spacer
caaaatcagcattcattacatatgtaacta	Protospacer
.  *** *******************.   

42. spacer 1.7|527361|30|NZ_CP042213|CRISPRCasFinder,CRT matches to NC_018666 (Escherichia coli O104:H4 str. 2011C-3493 plasmid pAA-EA11, complete sequence) position: , mismatch: 8, identity: 0.733

tctaatgagcattcattacatatgtagaac	CRISPR spacer
caaaatcagcattcattacatatgtaacta	Protospacer
.  *** *******************.   

43. spacer 1.7|527361|30|NZ_CP042213|CRISPRCasFinder,CRT matches to NC_018662 (Escherichia coli O104:H4 str. 2009EL-2071 plasmid pAA-09EL71, complete sequence) position: , mismatch: 8, identity: 0.733

tctaatgagcattcattacatatgtagaac	CRISPR spacer
caaaatcagcattcattacatatgtaacta	Protospacer
.  *** *******************.   

44. spacer 1.7|527361|30|NZ_CP042213|CRISPRCasFinder,CRT matches to NZ_CP013186 (Escherichia coli strain FORC_029 plasmid FORC_029p, complete sequence) position: , mismatch: 8, identity: 0.733

tctaatgagcattcattacatatgtagaac	CRISPR spacer
caaaatcagcattcattacatatgtaacta	Protospacer
.  *** *******************.   

45. spacer 1.7|527361|30|NZ_CP042213|CRISPRCasFinder,CRT matches to NZ_CP022087 (Escherichia coli O104:H4 strain FDAARGOS_348 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.733

tctaatgagcattcattacatatgtagaac	CRISPR spacer
caaaatcagcattcattacatatgtaacta	Protospacer
.  *** *******************.   

46. spacer 1.7|527361|30|NZ_CP042213|CRISPRCasFinder,CRT matches to CP049615 (Escherichia coli O157:H7 strain K1516 plasmid pK1516-3, complete sequence) position: , mismatch: 8, identity: 0.733

tctaatgagcattcattacatatgtagaac	CRISPR spacer
caaaatcagcattcattacatatgtaacta	Protospacer
.  *** *******************.   

47. spacer 1.7|527361|30|NZ_CP042213|CRISPRCasFinder,CRT matches to NC_022743 (Escherichia coli plasmid pHUSEC2011-2, complete sequence) position: , mismatch: 8, identity: 0.733

tctaatgagcattcattacatatgtagaac	CRISPR spacer
caaaatcagcattcattacatatgtaacta	Protospacer
.  *** *******************.   

48. spacer 1.7|527361|30|NZ_CP042213|CRISPRCasFinder,CRT matches to KU886273 (Freshwater phage uvFW-CGR-AMD-COM-C455, complete genome) position: , mismatch: 8, identity: 0.733

tctaatgagcattcattacatatgtagaac	CRISPR spacer
ttgggctagtattcattacaaatgtagaac	Protospacer
*. ... **.********** *********

49. spacer 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT matches to NZ_CP028270 (Pediococcus pentosaceus strain SRCM102740 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

aggggagaaaaagccaaatcaaaaaagttt	CRISPR spacer
aattgagaaaaaggcaaatcaaaaattcct	Protospacer
*.  ********* ***********  ..*

50. spacer 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT matches to NZ_CP028267 (Pediococcus pentosaceus strain SRCM102739 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

aggggagaaaaagccaaatcaaaaaagttt	CRISPR spacer
aattgagaaaaaggcaaatcaaaaattcct	Protospacer
*.  ********* ***********  ..*

51. spacer 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT matches to NZ_CP015919 (Pediococcus pentosaceus strain wikim20 plasmid pKPP01, complete sequence) position: , mismatch: 8, identity: 0.733

aggggagaaaaagccaaatcaaaaaagttt	CRISPR spacer
aattgagaaaaaggcaaatcaaaaattcct	Protospacer
*.  ********* ***********  ..*

52. spacer 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT matches to NZ_CP021931 (Lactobacillus plantarum strain TMW 1.1308 plasmid pL11308-1, complete sequence) position: , mismatch: 8, identity: 0.733

aggggagaaaaagccaaatcaaaaaagttt	CRISPR spacer
aattgagaaaaaggcaaatcaaaaattcct	Protospacer
*.  ********* ***********  ..*

53. spacer 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT matches to NZ_CP024059 (Lactobacillus plantarum strain KACC 92189 plasmid unnamed1) position: , mismatch: 8, identity: 0.733

aggggagaaaaagccaaatcaaaaaagttt	CRISPR spacer
aattgagaaaaaggcaaatcaaaaattcct	Protospacer
*.  ********* ***********  ..*

54. spacer 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT matches to NZ_CP028265 (Pediococcus pentosaceus strain SRCM102738 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

aggggagaaaaagccaaatcaaaaaagttt	CRISPR spacer
aattgagaaaaaggcaaatcaaaaattcct	Protospacer
*.  ********* ***********  ..*

55. spacer 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT matches to NZ_CP018326 (Lactobacillus plantarum subsp. plantarum strain TS12 plasmid pLP12-2, complete sequence) position: , mismatch: 8, identity: 0.733

aggggagaaaaagccaaatcaaaaaagttt	CRISPR spacer
aattgagaaaaaggcaaatcaaaaattcct	Protospacer
*.  ********* ***********  ..*

56. spacer 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT matches to NZ_CP019582 (Lactobacillus helveticus strain LH5 plasmid pCBTLH5_1, complete sequence) position: , mismatch: 8, identity: 0.733

aggggagaaaaagccaaatcaaaaaagttt	CRISPR spacer
aattgagaaaaaggcaaatcaaaaattcct	Protospacer
*.  ********* ***********  ..*

57. spacer 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT matches to NZ_CP035308 (Lactobacillus helveticus strain IDCC3801 plasmid pHel23910, complete sequence) position: , mismatch: 8, identity: 0.733

aggggagaaaaagccaaatcaaaaaagttt	CRISPR spacer
aattgagaaaaaggcaaatcaaaaattcct	Protospacer
*.  ********* ***********  ..*

58. spacer 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT matches to NZ_CP029972 (Lactobacillus kefiri strain DH5 plasmid pDH5, complete sequence) position: , mismatch: 8, identity: 0.733

aggggagaaaaagccaaatcaaaaaagttt	CRISPR spacer
aattgagaaaaaggcaaatcaaaaattcct	Protospacer
*.  ********* ***********  ..*

59. spacer 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT matches to NZ_CP029967 (Lactobacillus curvatus strain ZJUNIT8 plasmid pnunamed1, complete sequence) position: , mismatch: 8, identity: 0.733

aggggagaaaaagccaaatcaaaaaagttt	CRISPR spacer
aattgagaaaaaggcaaatcaaaaattcct	Protospacer
*.  ********* ***********  ..*

60. spacer 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT matches to LT615366 (Enterococcus phage VPE25 genome assembly, chromosome: VPE25) position: , mismatch: 8, identity: 0.733

aggggagaaaaagccaaatcaaaaaagttt	CRISPR spacer
cgaaaagaaaaagccaaatcacaagagtag	Protospacer
 *...**************** **.***  

61. spacer 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT matches to LT546029 (Enterococcus phage VFW genome assembly, chromosome: VFW) position: , mismatch: 8, identity: 0.733

aggggagaaaaagccaaatcaaaaaagttt	CRISPR spacer
cgaaaagaaaaagccaaatcacaagagtag	Protospacer
 *...**************** **.***  

62. spacer 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT matches to LT546030 (Enterococcus phage VPE25 genome assembly, chromosome: I) position: , mismatch: 8, identity: 0.733

aggggagaaaaagccaaatcaaaaaagttt	CRISPR spacer
cgaaaagaaaaagccaaatcacaagagtag	Protospacer
 *...**************** **.***  

63. spacer 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT matches to MT119360 (Enterococcus phage nattely, complete genome) position: , mismatch: 8, identity: 0.733

aggggagaaaaagccaaatcaaaaaagttt	CRISPR spacer
cgaaaagaaaaagccaaatcacaagagtag	Protospacer
 *...**************** **.***  

64. spacer 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT matches to NZ_CP037431 (Lactobacillus plantarum strain EM plasmid pEM2, complete sequence) position: , mismatch: 8, identity: 0.733

aggggagaaaaagccaaatcaaaaaagttt	CRISPR spacer
aattgagaaaaaggcaaatcaaaaattcct	Protospacer
*.  ********* ***********  ..*

65. spacer 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT matches to NZ_CP025692 (Lactobacillus plantarum strain IRG1 plasmid pIRG102, complete sequence) position: , mismatch: 8, identity: 0.733

aggggagaaaaagccaaatcaaaaaagttt	CRISPR spacer
aattgagaaaaaggcaaatcaaaaattcct	Protospacer
*.  ********* ***********  ..*

66. spacer 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT matches to NZ_CP035559 (Lactobacillus plantarum strain SRCM103297 plasmid unnamed3) position: , mismatch: 8, identity: 0.733

aggggagaaaaagccaaatcaaaaaagttt	CRISPR spacer
aattgagaaaaaggcaaatcaaaaattcct	Protospacer
*.  ********* ***********  ..*

67. spacer 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT matches to NZ_CP035572 (Lactobacillus plantarum strain SRCM103303 plasmid unnamed1) position: , mismatch: 8, identity: 0.733

aggggagaaaaagccaaatcaaaaaagttt	CRISPR spacer
aattgagaaaaaggcaaatcaaaaattcct	Protospacer
*.  ********* ***********  ..*

68. spacer 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT matches to NZ_CP035175 (Lactobacillus plantarum strain SRCM103426 plasmid unnamed1) position: , mismatch: 8, identity: 0.733

aggggagaaaaagccaaatcaaaaaagttt	CRISPR spacer
aattgagaaaaaggcaaatcaaaaattcct	Protospacer
*.  ********* ***********  ..*

69. spacer 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT matches to NZ_CP018327 (Lactobacillus plantarum subsp. plantarum strain TS12 plasmid pLP12-3, complete sequence) position: , mismatch: 8, identity: 0.733

aggggagaaaaagccaaatcaaaaaagttt	CRISPR spacer
aattgagaaaaaggcaaatcaaaaattcct	Protospacer
*.  ********* ***********  ..*

70. spacer 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT matches to NZ_CP035116 (Lactobacillus plantarum strain SRCM103295 plasmid unnamed3) position: , mismatch: 8, identity: 0.733

aggggagaaaaagccaaatcaaaaaagttt	CRISPR spacer
aattgagaaaaaggcaaatcaaaaattcct	Protospacer
*.  ********* ***********  ..*

71. spacer 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT matches to NZ_CP018798 (Lactobacillus parabuchneri strain FAM21731 plasmid pFAM21731.2, complete sequence) position: , mismatch: 8, identity: 0.733

aggggagaaaaagccaaatcaaaaaagttt	CRISPR spacer
aattgagaaaaaggcaaatcaaaaattcct	Protospacer
*.  ********* ***********  ..*

72. spacer 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT matches to NZ_CP025415 (Lactobacillus plantarum strain X7021 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.733

aggggagaaaaagccaaatcaaaaaagttt	CRISPR spacer
aattgagaaaaaggcaaatcaaaaattcct	Protospacer
*.  ********* ***********  ..*

73. spacer 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT matches to NZ_CP021928 (Pediococcus pentosaceus strain SRCM100194 plasmid pPP194-2, complete sequence) position: , mismatch: 8, identity: 0.733

aggggagaaaaagccaaatcaaaaaagttt	CRISPR spacer
aattgagaaaaaggcaaatcaaaaattcct	Protospacer
*.  ********* ***********  ..*

74. spacer 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT matches to NZ_CP035145 (Lactobacillus plantarum strain SRCM103357 plasmid unnamed2) position: , mismatch: 8, identity: 0.733

aggggagaaaaagccaaatcaaaaaagttt	CRISPR spacer
aattgagaaaaaggcaaatcaaaaattcct	Protospacer
*.  ********* ***********  ..*

75. spacer 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT matches to NZ_CP050806 (Lactobacillus plantarum strain SPC-SNU 72-2 plasmid pLBP752, complete sequence) position: , mismatch: 8, identity: 0.733

aggggagaaaaagccaaatcaaaaaagttt	CRISPR spacer
aattgagaaaaaggcaaatcaaaaattcct	Protospacer
*.  ********* ***********  ..*

76. spacer 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT matches to NZ_CP028277 (Lactobacillus plantarum strain SRCM100995 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.733

aggggagaaaaagccaaatcaaaaaagttt	CRISPR spacer
aattgagaaaaaggcaaatcaaaaattcct	Protospacer
*.  ********* ***********  ..*

77. spacer 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT matches to NZ_CP013152 (Lactobacillus plantarum strain MF1298 plasmid pMF1298-4, complete sequence) position: , mismatch: 8, identity: 0.733

aggggagaaaaagccaaatcaaaaaagttt	CRISPR spacer
aattgagaaaaaggcaaatcaaaaattcct	Protospacer
*.  ********* ***********  ..*

78. spacer 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT matches to MT119361 (Enterococus phage vipetofem, complete genome) position: , mismatch: 8, identity: 0.733

aggggagaaaaagccaaatcaaaaaagttt	CRISPR spacer
cgaaaagaaaaagccaaatcacaagagtag	Protospacer
 *...**************** **.***  

79. spacer 3.2|1815381|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046399 (Bacillus sp. A260 plasmid unnamed11, complete sequence) position: , mismatch: 8, identity: 0.733

tgtttttaatattgccgtcttttaaataag	CRISPR spacer
attttttaatatagccttcttttaaagtta	Protospacer
  ********** *** *********   .

80. spacer 3.2|1815381|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR matches to KT852578 (Bacillus phage BMBtp1, complete genome) position: , mismatch: 8, identity: 0.733

tgtttttaatattgccgtcttttaaataag	CRISPR spacer
ctattttaatattgccctcttttacatctc	Protospacer
.  ************* ******* **   

81. spacer 3.4|1815513|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013139 (Pseudoalteromonas sp. Bsw20308 plasmid pPBSW1, complete sequence) position: , mismatch: 8, identity: 0.733

aagcaagaatagtaagaactacaaaaatgc	CRISPR spacer
atactgctatagtaagaactataaaaatga	Protospacer
* .* .  *************.******* 

82. spacer 3.4|1815513|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR matches to MN693692 (Marine virus AFVG_250M675, complete genome) position: , mismatch: 8, identity: 0.733

aagcaagaatagtaagaactacaaaaatgc------	CRISPR spacer
aagcaagaatagcaagaact------aagctttatt	Protospacer
************.*******      * **      

83. spacer 3.5|1815579|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR matches to AP017992 (Planktothrix agardhii NIES-204 plasmid plasmid1 DNA, complete sequence) position: , mismatch: 8, identity: 0.733

gcatcaatcaaaattccctcaatcacataa	CRISPR spacer
ccggactccataattccctcaatcacataa	Protospacer
 *.    .** *******************

84. spacer 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT matches to NZ_CP047122 (Lactobacillus hilgardii strain FLUB plasmid unnamed1) position: , mismatch: 9, identity: 0.7

aggggagaaaaagccaaatcaaaaaagttt	CRISPR spacer
taacatctcaaagccaaatcaaaaaagttt	Protospacer
 .. .    *********************

85. spacer 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT matches to KM359505 (Prochlorococcus phage P-TIM68, complete genome) position: , mismatch: 9, identity: 0.7

aggggagaaaaagccaaatcaaaaaagttt	CRISPR spacer
caaagagaaaaagcaaaattaaaaaaggaa	Protospacer
 ...********** ****.*******   

86. spacer 3.1|1815315|30|NZ_CP042213|CRISPRCasFinder,CRT matches to KY971610 (Pseudomonas phage PspYZU05, complete genome) position: , mismatch: 9, identity: 0.7

aggggagaaaaagccaaatcaaaaaagttt	CRISPR spacer
gaaagagaaaaagcaaaatcaaaaacctaa	Protospacer
....********** **********  *  

87. spacer 3.2|1815381|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018746 (Borreliella garinii strain CIP 103362 isolate 20047 plasmid unnamed1) position: , mismatch: 9, identity: 0.7

tgtttttaatattgccgtcttttaaataag	CRISPR spacer
atcttttaataatgccttcttttaaacttt	Protospacer
  .******** **** *********.   

88. spacer 3.2|1815381|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP028865 (Borreliella garinii strain 20047 plasmid lp36, complete sequence) position: , mismatch: 9, identity: 0.7

tgtttttaatattgccgtcttttaaataag	CRISPR spacer
atcttttaataatgccttcttttaaacttt	Protospacer
  .******** **** *********.   

89. spacer 3.2|1815381|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR matches to NC_001856 (Borreliella burgdorferi B31 plasmid lp38, complete sequence) position: , mismatch: 9, identity: 0.7

tgtttttaatattgccgtcttttaaataag	CRISPR spacer
atcttttaataatgccttcttttaaaattt	Protospacer
  .******** **** *********    

90. spacer 3.2|1815381|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019853 (Borreliella burgdorferi plasmid lp38, complete sequence) position: , mismatch: 9, identity: 0.7

tgtttttaatattgccgtcttttaaataag	CRISPR spacer
atcttttaataatgccttcttttaaaattt	Protospacer
  .******** **** *********    

91. spacer 3.2|1815381|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019764 (Borreliella burgdorferi strain B31_NRZ isolate B31 plasmid p_lp38, complete sequence) position: , mismatch: 9, identity: 0.7

tgtttttaatattgccgtcttttaaataag	CRISPR spacer
atcttttaataatgccttcttttaaaattt	Protospacer
  .******** **** *********    

92. spacer 3.2|1815381|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR matches to NC_017240 (Borreliella afzelii PKo plasmid lp32-10, complete sequence) position: , mismatch: 9, identity: 0.7

tgtttttaatattgccgtcttttaaataag	CRISPR spacer
atcttttaataatgccttcttttaaacttt	Protospacer
  .******** **** *********.   

93. spacer 3.6|1815645|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR matches to NC_031070 (Bacillus phage Nemo, complete genome) position: , mismatch: 9, identity: 0.7

gaagatggtagcgaagttattgtaaatccc	CRISPR spacer
atcaatggtagcgaagttgttgttaatgga	Protospacer
.  .**************.**** ***   

94. spacer 3.6|1815645|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR matches to MK599315 (Pseudomonas phage PA1C, complete genome) position: , mismatch: 9, identity: 0.7

gaagatggtagcgaagttattgtaaatccc	CRISPR spacer
atagatggtagtaaagttattgtaatcgat	Protospacer
. *********..************ .  .

95. spacer 3.6|1815645|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR matches to MH638311 (Bacillus phage OmnioDeoPrimus, complete genome) position: , mismatch: 9, identity: 0.7

gaagatggtagcgaagttattgtaaatccc	CRISPR spacer
atcaatggtagcgaagttgttgttaatgga	Protospacer
.  .**************.**** ***   

96. spacer 3.6|1815645|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR matches to MF288918 (Bacillus phage Bubs, complete genome) position: , mismatch: 9, identity: 0.7

gaagatggtagcgaagttattgtaaatccc	CRISPR spacer
atcaatggtagcgaagttgttgttaatgga	Protospacer
.  .**************.**** ***   

97. spacer 3.6|1815645|30|NZ_CP042213|CRISPRCasFinder,CRT,PILER-CR matches to MN693104 (Marine virus AFVG_25M237, complete genome) position: , mismatch: 9, identity: 0.7

gaagatggtagcgaagttattgtaaatccc	CRISPR spacer
gctatcggtagcggagttattgtaaatgat	Protospacer
*  . .*******.*************  .

98. spacer 1.1|526963|32|NZ_CP042213|CRISPRCasFinder,CRT matches to NC_020062 (Rhizobium tropici CIAT 899 plasmid pRtrCIAT899c, complete sequence) position: , mismatch: 10, identity: 0.688

actgctcattcgttttctcctcctaacacgct	CRISPR spacer
actgctcattcgtttccccctccgcgaattgc	Protospacer
***************.*.*****  . *.  .

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 768545 : 776466 11 Planktothrix_phage(16.67%) transposase NA
DBSCAN-SWA_2 1140589 : 1158360 21 Enterococcus_phage(42.86%) holin,tail NA
DBSCAN-SWA_3 1579763 : 1588407 9 Synechococcus_phage(50.0%) NA NA
DBSCAN-SWA_4 1737707 : 1778048 47 Enterococcus_phage(31.25%) portal,terminase,plate,holin,tRNA,head,tail NA
DBSCAN-SWA_5 1781995 : 1793589 21 Enterococcus_phage(80.0%) integrase attL 1772477:1772490|attR 1795390:1795403
DBSCAN-SWA_6 1833644 : 1844778 12 Enterococcus_phage(50.0%) holin NA
DBSCAN-SWA_7 1863046 : 1876744 31 Enterococcus_phage(57.89%) NA NA
DBSCAN-SWA_8 2236923 : 2318262 92 Enterococcus_phage(27.08%) portal,protease,terminase,holin,tRNA,capsid,tail NA
DBSCAN-SWA_9 2386765 : 2396506 11 Streptococcus_phage(57.14%) NA NA
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Click the colored protein region to show detailed information
Click the colored protein region to show detailed information
Click the colored protein region to show detailed information
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
NZ_CP042213.1|WP_002359487.1|2315661_2316126_+|hypothetical-protein 2315661_2316126_+ 154 aa aa NA NA NA 2236923-2318262 yes
NZ_CP042213.1|WP_002359485.1|2316207_2316789_+|hypothetical-protein 2316207_2316789_+ 193 aa aa NA NA NA 2236923-2318262 yes
NZ_CP042213.1|WP_002400150.1|2312895_2313210_-|hypothetical-protein 2312895_2313210_- 104 aa aa NA NA NA 2236923-2318262 yes
NZ_CP042213.1|WP_153246809.1|2313952_2314510_+|hypothetical-protein 2313952_2314510_+ 185 aa aa NA NA NA 2236923-2318262 yes
2. NZ_CP042215
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 6799 11 Listeria_phage(20.0%) NA NA
DBSCAN-SWA_2 13352 : 19407 4 Organic_Lake_phycodnavirus(33.33%) transposase NA
DBSCAN-SWA_3 22658 : 28844 9 Escherichia_phage(33.33%) NA NA
DBSCAN-SWA_4 60241 : 61855 3 Streptococcus_phage(100.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. NZ_CP042214
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 25465 : 69758 49 Streptococcus_phage(77.27%) integrase,protease,bacteriocin,transposase attL 37613:37627|attR 70892:70906
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage