CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
NZ_CP026013	Klebsiella variicola strain 13450 chromosome, complete genome	3 crisprs	cas3,csa3,DEDDh,RT,DinG,cas3HD,WYL	6
NZ_CP026015	Klebsiella variicola strain 13450 plasmid p13450-3, complete sequence	0 crisprs	NA	5
NZ_CP026016	Klebsiella variicola strain 13450 plasmid p13450-2, complete sequence	0 crisprs	NA	1
NZ_CP026014	Klebsiella variicola strain 13450 plasmid p13450-1, complete sequence	0 crisprs	WYL,RT,csa3	5

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP026013_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP026013_1

629636-629725

Orphan

Consensus_repeat	Method
GTGCCGAACGGTTCCCTCACCCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP026013_1

>merge|NZ_CP026013|1|629636-629725|CRISPRCasFinder
GTGCCGAACGGTTCCCTCACCCAAAGGGCGAGAGGGAAAGGCGGATCGGCATCGGTATTCAAGGCCTGTGCCGAACGGTTCCCTCTCCCA

>NZ_CP026013|1|1|629636-629725|CRISPRCasFinder
GTGCCGAACGGTTCCCTCACCCA	AAGGGCGAGAGGGAAAGGCGGATCGGCATCGGTATTCAAGGCCT
GTGCCGAACGGTTCCCTCTCCCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP026013.1\|WP_004188496.1\|618993_619965_-\|TerC-family-protein	unknown	unknown	gnl\|CDD\|274743
NZ_CP026013.1\|WP_016161856.1\|634040_635075_+\|autoinducer-2-ABC-transporter-permease-LsrC	unknown	unknown	gnl\|CDD\|185330
NZ_CP026013.1\|WP_112293545.1\|620236_621226_-\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP026013.1\|WP_002917723.1\|637985_638282_+\|(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione-isomerase	unknown	unknown	gnl\|CDD\|182494
NZ_CP026013.1\|WP_022066316.1\|632556_634044_+\|autoinducer-2-ABC-transporter-ATP-binding-protein-LsrA	unknown	unknown	gnl\|CDD\|185336
NZ_CP026013.1\|WP_022066317.1\|629736_631329_-\|autoinducer-2-kinase	unknown	unknown	gnl\|CDD\|182853
NZ_CP026013.1\|WP_022066315.1\|635075_636080_+\|autoinducer-2-ABC-transporter-permease-LsrD	unknown	unknown	gnl\|CDD\|184998
NZ_CP026013.1\|WP_012540512.1\|638329_639709_-\|putrescine-aminotransferase	unknown	unknown	gnl\|CDD\|183175
NZ_CP026013.1\|WP_008806578.1\|617514_618762_-\|serine/threonine-transporter-SstT	unknown	unknown	gnl\|CDD\|184190
NZ_CP026013.1\|WP_012540508.1\|631366_632338_-\|transcriptional-regulator-LsrR	unknown	unknown	gnl\|CDD\|237962
NZ_CP026013.1\|WP_008806575.1\|621299_621800_-\|M48-family-metallopeptidase	unknown	unknown	gnl\|CDD\|224368
NZ_CP026013.1\|WP_012967199.1\|637101_637989_+\|3-hydroxy-5-phosphonooxypentane-2,4-dione-thiolase	unknown	unknown	gnl\|CDD\|181306
NZ_CP026013.1\|WP_008806562.1\|639966_640521_-\|PadR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224609
NZ_CP026013.1\|WP_012540503.1\|623651_624518_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NZ_CP026013.1\|WP_008806572.1\|624626_625967_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|236610
NZ_CP026013.1\|WP_012967193.1\|626043_627174_+\|23S-rRNA-(guanine(1835)-N(2))-methyltransferase-RlmG	unknown	unknown	gnl\|CDD\|184963
NZ_CP026013.1\|WP_022066319.1\|621878_623522_-\|glycoside-hydrolase-family-43-protein	unknown	unknown	gnl\|CDD\|350114
NZ_CP026013.1\|WP_008806564.1\|636076_637090_+\|autoinducer-2-ABC-transporter-substrate-binding-protein-LsrB	unknown	unknown	gnl\|CDD\|237961
NZ_CP026013.1\|WP_004181395.1\|627423_629445_-\|NADPH-dependent-2,4-dienoyl-CoA-reductase	unknown	unknown	gnl\|CDD\|239240
NZ_CP026013.1\|WP_008806579.1\|616944_617499_+\|YgjV-family-protein	unknown	unknown	gnl\|CDD\|378474

Protein	Function_ID	Function_description	E-value
NZ_CP026013.1\|WP_004188496.1\|618993_619965_-\|TerC-family-protein	gnl\|CDD\|274743	TIGR03718, R_switched_Alx, integral membrane protein, TerC family. Rfam model RF00080 describes a structured RNA element called the yybP-ykoY leader, or SraF, which may precede one or several genes in a genome. Members of this highly hydrophobic protein family often are preceded by a yybP-ykoY leader, which may serve as a riboswitch. From the larger group of TerC homologs (pfam03741), this subfamily contains TerC itself from Alcaligenes sp. plasmid IncHI2 pMER610 and from Proteus mirabilis. It also contains the alkaline-inducible E. coli protein Alx, which unlike the two TerC examples is preceded by a yybP-ykoY leader.	5.09822e-143
NZ_CP026013.1\|WP_016161856.1\|634040_635075_+\|autoinducer-2-ABC-transporter-permease-LsrC	gnl\|CDD\|185330	PRK15432, PRK15432, autoinducer 2 ABC transporter permease LsrC; Provisional.	0
NZ_CP026013.1\|WP_112293545.1\|620236_621226_-\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	6.74905e-67
NZ_CP026013.1\|WP_002917723.1\|637985_638282_+\|(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione-isomerase	gnl\|CDD\|182494	PRK10486, PRK10486, (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase.	6.90108e-61
NZ_CP026013.1\|WP_022066316.1\|632556_634044_+\|autoinducer-2-ABC-transporter-ATP-binding-protein-LsrA	gnl\|CDD\|185336	PRK15439, PRK15439, autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional.	0
NZ_CP026013.1\|WP_022066317.1\|629736_631329_-\|autoinducer-2-kinase	gnl\|CDD\|182853	PRK10939, PRK10939, autoinducer-2 (AI-2) kinase; Provisional.	0
NZ_CP026013.1\|WP_022066315.1\|635075_636080_+\|autoinducer-2-ABC-transporter-permease-LsrD	gnl\|CDD\|184998	PRK15038, PRK15038, autoinducer 2 ABC transporter permease LsrD.	3.32579e-144
NZ_CP026013.1\|WP_012540512.1\|638329_639709_-\|putrescine-aminotransferase	gnl\|CDD\|183175	PRK11522, PRK11522, putrescine--2-oxoglutarate aminotransferase; Provisional.	0
NZ_CP026013.1\|WP_008806578.1\|617514_618762_-\|serine/threonine-transporter-SstT	gnl\|CDD\|184190	PRK13628, PRK13628, serine/threonine transporter SstT; Provisional.	0
NZ_CP026013.1\|WP_012540508.1\|631366_632338_-\|transcriptional-regulator-LsrR	gnl\|CDD\|237962	PRK15418, PRK15418, transcriptional regulator LsrR; Provisional.	0
NZ_CP026013.1\|WP_008806575.1\|621299_621800_-\|M48-family-metallopeptidase	gnl\|CDD\|224368	COG1451, COG1451, Predicted metal-dependent hydrolase [General function prediction only].	4.53758e-36
NZ_CP026013.1\|WP_012967199.1\|637101_637989_+\|3-hydroxy-5-phosphonooxypentane-2,4-dione-thiolase	gnl\|CDD\|181306	PRK08227, PRK08227, 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase.	0
NZ_CP026013.1\|WP_008806562.1\|639966_640521_-\|PadR-family-transcriptional-regulator	gnl\|CDD\|224609	COG1695, COG1695, Predicted transcriptional regulators [Transcription].	2.3632e-22
NZ_CP026013.1\|WP_012540503.1\|623651_624518_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	1.41737e-18
NZ_CP026013.1\|WP_008806572.1\|624626_625967_+\|MFS-transporter	gnl\|CDD\|236610	PRK09669, PRK09669, putative symporter YagG; Provisional.	0
NZ_CP026013.1\|WP_012967193.1\|626043_627174_+\|23S-rRNA-(guanine(1835)-N(2))-methyltransferase-RlmG	gnl\|CDD\|184963	PRK15001, PRK15001, 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG.	0
NZ_CP026013.1\|WP_022066319.1\|621878_623522_-\|glycoside-hydrolase-family-43-protein	gnl\|CDD\|350114	cd09000, GH43_SXA-like, Glycosyl hydrolase family 43, such as Selenomonas ruminantium beta-D-xylosidase SXA. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized to mainly have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity, including Selenomonas ruminantium (Xsa;Sxa;SXA), Bifidobacterium adolescentis ATCC 15703 (XylC;XynB;BAD_0428) and Bacillus sp. KK-1 XylB. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. These enzymes possess an additional C-terminal beta-sandwich domain that restricts access for substrates to a portion of the active site to form a pocket. The active-site pockets comprise of two subsites, with binding capacity for two monosaccharide moieties and a single route of access for small molecules such as substrate. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.	4.9341e-176
NZ_CP026013.1\|WP_008806564.1\|636076_637090_+\|autoinducer-2-ABC-transporter-substrate-binding-protein-LsrB	gnl\|CDD\|237961	PRK15408, PRK15408, autoinducer 2 ABC transporter substrate-binding protein LsrB.	0
NZ_CP026013.1\|WP_004181395.1\|627423_629445_-\|NADPH-dependent-2,4-dienoyl-CoA-reductase	gnl\|CDD\|239240	cd02930, DCR_FMN, 2,4-dienoyl-CoA reductase (DCR) FMN-binding domain. DCR in E. coli is an iron-sulfur flavoenzyme which contains FMN, FAD, and a 4Fe-4S cluster. It is also a monomer, unlike that of its eukaryotic counterparts which form homotetramers and lack the flavin and iron-sulfur cofactors. Metabolism of unsaturated fatty acids requires auxiliary enzymes in addition to those used in b-oxidation. After a given number of cycles through the b-oxidation pathway, those unsaturated fatty acyl-CoAs with double bonds at even-numbered carbon positions contain 2-trans, 4-cis double bonds that can not be modified by enoyl-CoA hydratase. DCR utilizes NADPH to remove the C4-C5 double bond. DCR can catalyze the reduction of both natural fatty acids with cis double bonds, as well as substrates containing trans double bonds. The reaction is initiated by hybrid transfer from NADPH to FAD, which in turn transfers electrons, one at a time, to FMN via the 4Fe-4S cluster. The fully reduced FMN provides a hydrid ion to the C5 atom of substrate, and Tyr and His are proposed to form a catalytic dyad that protonates the C4 atom of the substrate and completes the reaction.	0
NZ_CP026013.1\|WP_008806579.1\|616944_617499_+\|YgjV-family-protein	gnl\|CDD\|378474	pfam10688, Imp-YgjV, Bacterial inner membrane protein. This is a family of inner membrane proteins. Many of the members are YgjV protein.	1.25182e-58

>NZ_CP026013.1|WP_004181395.1|627423_629445_-|NADPH-dependent-2,4-dienoyl-CoA-reductase
MSRYPSLFAPLELGFTTLKNRVLMGSMHTGLEELPDGAQRLAAFYAERARHGVALIVTGGIAPAPSGVTMAGGAVLNDASHLAHHRHITDAVHQEGGKIALQILHTGRYSYQPALVAPSALQAPINRFTPHELSHDEILTLIDDFAHCAQLAREAGYDGVEVMGSEGYLINEFLAARTNQRDDQWGGDYARRMRFAVEVVKAVRQRAGHDFIIIYRLSMLDLVNDGSTLAEVTELAKAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGAVSIPLITTNRINDPQVAEDILARGDADMVSMARPFLADAEFISKAQDDRADQINTCIGCNQACLDRIFVGKVTSCLVNPRACHETLMPVLPANAPKRLAVVGAGPAGLAFAVNAAARGHHVTLFDALPEIGGQFNIAKQIPGKEEFHETLRYYRTMLDLHGVDLRLNTRVTTDDLLAFDETILATGIAPRLPAIDGIDHPKVLSYLDVLRDKAPVGAKVAIIGCGGIGFDTAMFLSQSGAATSQDIGEFCREWGIDTSLQTAGGLSAEGPQLSKSPRQIVMLQRKASKPGEGLGKTTGWIHRATLLARGVKMIPAVSYEKIDDEGLHVTIGGERQLLAVDQVVICAGQEPRRELADPLRAAGKTVHLIGGCDVAAELDARRAIAQGTKLALAI
>NZ_CP026013.1|WP_012967193.1|626043_627174_+|23S-rRNA-(guanine(1835)-N(2))-methyltransferase-RlmG
MSQAELNGELFTLERFPPNAEEEALQAWEAADEYLLQQVNDVDGLTLIFNDGFGALACALAARNPVSINDSFISELATRHNLRMNGIDEESVRFQDSLSPLPAAPALVLIKVPKQLALLEQQLRALREVVTPETRIIAAAKARDVHNSTLALFEKILGTTTTSLAWKKARLIHCVFTAPKLADAPQTYSWKLDGTPWTIHNHANVFARSGLDIGARFFLQHLPSDLEGEIADLGCGNGVIGLQALAQNPNASVMFTDESHMAVASSRLNVERNLPDDIARCEFMVNNSLSGIEPDRFTAILCNPPFHQQHAITDHIAWQMFNDARRSLKYGGELYVVGNRHLDYFRKLKRAFGNCTTIATNNKFVILKATKVRKQR
>NZ_CP026013.1|WP_008806572.1|624626_625967_+|MFS-transporter
MNTARISIKEKFSYGLGDTGCNLVWQTVMLFMAWFYTDVFGLSPAHMGTMFLAVRVLDAVTDVLMGAVADRTRTKYGQFRPYILWFAIPFGVLCCLTFYTPDLGYSGKLIYAYVSYTLLSLVYTAINVPYCAMINNISNDSRERVSLQSWRFALSTLGGLIVSLTALPLVAWLGKGNLQNGYFYTMMVMGALSIVLFFICFGLTKERYSTDITANNQSSILDDLKTLLANKDWRILFTLNVVNLIAVLFKGGTTLYYVNNIMGRADLGSLLLTTTLASGVVGAMLSPFIFKNIDKVKGFKLSMALEAVLLIAMYFVPAGNVAAIFTLVIIINIIQLAATPLQWSMLSDIIDAEEKRSGKKLSGIVFSTNLFAIKLGIAIGGALVGYLLAWGDYVGGAAQQSASALQMIKLLFTLFPGVLVALLIVIMNRYSLDDKRLSHMAQESGR
>NZ_CP026013.1|WP_012540503.1|623651_624518_-|helix-turn-helix-transcriptional-regulator
MSDESPVFEKIPVGAGELFTLRADNINDFNGINVVPHFHMMDELMWFRESGGSYSIGDEKFTIKNNTLVYVPALLIHEMTLPPAASHKRYLMQFEKEWLEGYDLSLPAAHCGAVVYLSGEEAERLELLLSWCSEFSDFSDSLFRSLMQSVLLHAFNRLKDSVPVTERTHHRYLSELIELLQVINANENFEMTTEEAARRCQWSKSWFSRTFKSAFGISFKKFMLLRKLNIAVNLLTNTDLKISDISQSAGFTDSAYFCLKFKEMMNDTPQSFRHKIRSTDAVGSRAEK
>NZ_CP026013.1|WP_022066319.1|621878_623522_-|glycoside-hydrolase-family-43-protein
MIQNPVFRGFNPDPCICRRGDDYYVAVSSFEWFPGLPVYHSRDLKHWQLLTHVLTDDNNPDLKKLPSAKGIWAPSLTWCEEEKLFYVIYGVMNSMNSRYFDVDNYLITAEEITGPWSAPVYLHSAGFDASILHDHDGRKWIVSLEWETREGYEKPGAICLVEYSPQTHSVIGYPQRIWHGGTDRGCIEAPHLTRRGDYYYLMVAEGGTGYGHSVTMARATEVAGPYQGDPLNPIVTSWPENFNERKDTGHLKPHYFNPETYLQKAGHGSYVETPTGEVWLTHLCSRPFRQELRCPLGRETALQRMEWSEDGWLRLAAGGHLAQHQVEGSRLPPHPFPPKADLDDFDEPRVDNAFYAPRIHFQRFTCLTRKAGYLALRGQESLSSLNKVSLLAKKLTSVYANISTKMDFNPEIYQHSAGLVLYYDNMNYLFLHKTWDETSGAAQLAIIYMDNGERHDDPQKIRLAEGEIYLAIAINGREVQCSWSVDGEHYHPIGAVYDTSHFSDEYSRYGEFTGAFVGMACVDSMLHRKEALFDFFCYRADEDAIIE
>NZ_CP026013.1|WP_008806575.1|621299_621800_-|M48-family-metallopeptidase
MSTLPYLHGYPESLLSQVTTLIEQDRLGEVLQKRYPQGHDVNSDKALYQYTQDLKARFLRGAAPINKVMYDSKIHVLNNALGLHTAISRVQGGKLKAKAEIRVATVFRDAPEAFLRMIVVHELAHLKEKDHNKAFYQLCCHMEPQYHQLEFDTRLWLTHLSLNRSA
>NZ_CP026013.1|WP_112293545.1|620236_621226_-|Gfo/Idh/MocA-family-oxidoreductase
MIRFAVVGTNWITKQFVDAAHETGKYKLTAIYSRSLEQAQAFANDYPVEHLFTSLDELAQSPDVDAVYIASPNSLHFPQTRLFLSHKKHVICEKPLASNLQEVEAAIALAKENNVVLFEAFKTASLPNFLLLKETLPKAGKLRKAFINYCQYSSRYQRYLDGENPNTFNPAFSNGSIMDIGFYCLASAVALWGEPRAVLATASLLDSGVDAQGTVVLSYGDFDVTLHHSKVSDSAIPNEIQGEDGTLVIEKISECQKLAFVPRGGKAQDLTQPQHINTMLYEAETFARLVETQDVNHPGLTVSRITAKLSSEIRRQTGVIFPADTQPLA
>NZ_CP026013.1|WP_004188496.1|618993_619965_-|TerC-family-protein
MNTVGTPLLWGGFAVVVAIMLAIDLLLQGRRGSHSMTMKQAAGWSILWVTLSLLFNAAFWWYLVQTQGRAVADPQALAFLTGYLIEKALAVDNVFVWLMLFSYFAVPPALQRRVLVYGVLGAIVLRTIMIFAGSWLISQFDWLLYVFGAFLLFTGVKMALAKEDDSGIGDKPLVRWIRSHLRMTDKIESERFFTRKNGVLFATPLLLVLILVELSDVIFAVDSIPAIFAVTTDPFIVLTSNLFAILGLRAMYFLLAGVAERFSMLKYGLSVILVFIGVKMLIVDFYHIPVAISLGVVGGILTVTLLINAWVNKQHDKQRKLPE
>NZ_CP026013.1|WP_008806578.1|617514_618762_-|serine/threonine-transporter-SstT
MTTRTPPSGWISRLAQGSLVKQILIGLVLGVLLALVSKPTAIAVGLLGTLFVGALKAVAPVLVLMLVMASIANHQHGQKTSIRPILFLYLLGTFSAALTAVLFSFVFPSTLHLTTAADSITPPSGIVEVLRGLLMSMVSNPIDALLNANYIGILVWAVGLGFALRHGNDTTKNLINDVSHAVTFIVKVVIRFAPLGIFGLVSSTLATTGFETLWGYAQLLLVLVGCMLLVALVINPLLVFWKIRRNPYPLVLTCLRESGVYAFFTRSSAANIPVNMALCEKLNLDRDTYSVSIPLGATINMAGAAITITVLTLAAVHTLNIPVDLPTALLLSVVASLCACGASGVAGGSLLLIPLACNMFGIPNDVAMQVVAVGFIIGVLQDSCETALNSSTDALFTAAACIAEDDQLAKNALRS
>NZ_CP026013.1|WP_008806579.1|616944_617499_+|YgjV-family-protein
MTAYWLAQGVGVIAFLIGITTFINRDERRFRLQLAVYSAIIGVHFFLMGAGSAGMSAGLNALRTVISLRTRSLWVMTVFILLTLILGLGKLQHAMELLPIIGTVASTWALFRCKGLTVRCVMWCSTACWVTHNLWLGSIGGTLIEGSFLIVNGLNIIRFRRMQKRGIDPFKVENAVQEESPSAR
>NZ_CP026013.1|WP_022066317.1|629736_631329_-|autoinducer-2-kinase
MSYLLALDAGTGSIRAVIFDLNGRQLAVGQAEWKHLSVDNVPGSMEFDLTTNWQLACQCIRQALNAAGLSAADIQSVACCSMREGIVLYDRDGEAIWACANVDARASREVAELKEIHDYRFESEVYEVSGQTLALSAMPRLLWLAHHRPDIYRKAATITMISDWLAAKLSGELAVDPSNAGTTGMLDLFSRDWRPALLDMAGLRADMLSPVKETGTLLGAVTEAAAHESGLRAGTPVVMGGGDVQLGCLGLGVVRAGQTAVLGGTFWQQVVNLPQVRTDPQMNIRVNPHVIPGMAQAESISFFTGLTMRWFRDAFCAEEKLIAERLGVDAYSLLEEMASRVPAGSHGVMPIFSDAMHFKQWYHAAPSFINLSIDPEKCNKATLFRALEENAAIVSACNLAQISQFSGVTFESLVFAGGGSKGALWSQILSDVTGLPVRVPVVREATALGCAIAAGTGAGLYGDMASTGERLVSWHREFTPNPQHRELYQEMMSKWQTVYADQLGLVDSGLTTSMWQAPGLERRQRVAPSP
>NZ_CP026013.1|WP_012540508.1|631366_632338_-|transcriptional-regulator-LsrR
MSEKRITEENRYAGLALAEEELVARVAWCYYHDGLTQNDIGERLGLPRLKISRLLEKGRQSGVIRVQINSRYEGCLALESELQQRFGLKIARVLPALNTPPMNTRLGIGAAQSLMGILQPGQLLAVGFGEATMSCLQHLSGFIGSQQVRLVTLSGGVGPYMTGIGQLDAACSVSIIPAPLRVSSAEVAEILRRESSVRDVILAATAADAAVVGIGAIDQRRDATILRSGYISEGEQLMYARKGAVGDILGYFLQADGRPVEGLEIHRELLGVTLDELAQLPTIVGVAGGEEKAQAIYAALTGKRINGLVTEETTARAVLALAS
>NZ_CP026013.1|WP_022066316.1|632556_634044_+|autoinducer-2-ABC-transporter-ATP-binding-protein-LsrA
MKPLLEARQICKQFSGVAVLKGIDFTLGAGQVHALMGGNGAGKSTLMKIIAGVETPDSGELTIGERAFARLNPALAHQLGIYLVPQEPMLFPNLSVRENILFRLPKRADTAPRLQEKLRQLNCQINLDASASTLEVADQQMVEILRGLMREARILILDEPTASLTPGETERLFSQIRALQALDVGIVFISHKLPEIRQLASHISVMRDGAVVLSGETAAYRDEQLINAMTPVSRDHALSDTQKLWLSLPGNRRTQPQDFPVLRVEDLTGEGFIDLNLEIRAGEIVGLAGLVGSGRTEFAETLYGLRPPRAGRIWLENREISRDSTRARLASGLVYLPEDRQVSGLFLDAPVRWNTVMFNQPSWWQQGKREAAVVERYHRALGIKLADGDQPVRTLSGGNQQKVLLARCLEANPLLLIVDEPTRGVDVSARADIYQLLKSVAAQNVAVLMISSDLDEFVGLADRVLVMHQGRYSGELARQAVTVDRMMTLAFGGQA
>NZ_CP026013.1|WP_016161856.1|634040_635075_+|autoinducer-2-ABC-transporter-permease-LsrC
MKTLLKNRELSAFFAIVALFAVLVALNPAYFSLQTLAMIFASSQILCLLALGATLVMLTRNIDVSVGSTVGLCAIAVGVALNNGYGLATAIAFALAIGALAGAFNGLLVVGLRIPAIVATLGTLGLYRGVMLLWTGGKWIEGLPDSLKSLSEPAFIGVSPLGWLVLALLLAGGWLLSRTAFGRDFYAVGDNLAAARQLGVAVNRTRMLAFTLNGMLAACAGIVFAAQIGFVPNQTGSGLEMKAIAACVLGGISLLGGTGTLLGAFLGAFFLTQIDTVLVLFRLPAWWNDFIAGLVLLGVLVLDGRLRQALARHQRALKYSRFQPGNKGGKQVARFPERKSKEVA
>NZ_CP026013.1|WP_022066315.1|635075_636080_+|autoinducer-2-ABC-transporter-permease-LsrD
MKLKLNWESALLALLIAEILLFGALNSRMLDLNMLLFSTSDFICIGIVALPLTLVIISGGIDISLGSTIGLCAIALGVMTQAAWPLWLAVSLTLLLGLLCGLFNAALIHYTGISPLVITLGTLYLYGGGALLLSGMAGATGYEGIGGFPDSFTAIANLTLAGLPLPLVLFAIITFLFWLLAHRGRFGRHLFLLGQNPRAARYAALSVNGIPYVLYGLVGVASAVAALVMVSYFGSARSDLGRDLLMPALTAAVLGGANIYGGSGSILGTALAALLVGYLQQGLQMVGIPNQVSSALSGALLVVVVMGRSLSLHREWVRATWRRLFSHRTIGAQQ
>NZ_CP026013.1|WP_008806564.1|636076_637090_+|autoinducer-2-ABC-transporter-substrate-binding-protein-LsrB
MKTKRILQVSALALAMSVVTAQAADRIAFIPKLVGVGFFTSGGNGAKEAGKALGVDVTYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVKVLTWDSDTKPECRSIYINQGTPQQLGGLLVEMAEKQVSKPAAKVAFFYSSPTVTDQNQWVKEAKAKIEKEHPQWQIVTTQFGYNDATKSLQTAEGILKAYPDLDAIIAPDANALPAAAQAAENLKRQGVAIVGFSTPNVMRPYVERGTVKAFGLWDVVQQGKIAVNVADRLLKKGDLNVGDSVEVKDIGSLKVEPNSVQGYQYEAKGNGIVLLPERVVFSKENINNYDF
>NZ_CP026013.1|WP_012967199.1|637101_637989_+|3-hydroxy-5-phosphonooxypentane-2,4-dione-thiolase
MADLDDIKEGKDFGIDRPQQNTLYTLKGCGSLDWGMQSRMARIFNPHSNRTVMLAFDHGYFQGPTTGLERIDLSIAPLFADTDVLMCTRGVLRSQVPAATNKPVVLRASGGNSILSELSNECVAVAMEDALRLNVCAVAAQVYIGSEYEHQSINNIIKLVDAGNRYGMPVLAVTGVGKEMTRDARYFSLASRIAAEMGAQFVKTYFVEEGFEKVTASCPVPIVIAGGKKLPEHEALEMCWRAIDQGASGVDMGRNIFQSSAPRAMLKAVKKVVHENLNAREAYQFWQEEKQGELK
>NZ_CP026013.1|WP_002917723.1|637985_638282_+|(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione-isomerase
MNVTLVEINIKPERVDEFLEVFRANHEGALQEPGNLRFDVLQDPEVKTRFFIYEAYKDDEAVLAHKKTPHYLACVEKLEEMMSQPRQKRSFIGLLPQV
>NZ_CP026013.1|WP_012540512.1|638329_639709_-|putrescine-aminotransferase
MNRLPSSASALACSAHALNLIEKRTLDHEEMKALNQEVREYFKEHVNPGFLEYRKSVTAGGDYGAVEWQAGGLNTLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVENQLAKQPLHSQELLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAAIKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGDINAMRTMLSECKKTGDDVAAVILEPIQGEGGVILPPQGYLPAVRKLCDEFGALLILDEVQTGMGRTGKMFACEHENVQPDILCLAKALGGGVMPIGATVATEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLTQNLPAQAAQKGDMLLDGFRLLAQEYPDLVNEVRGKGMLMAIEFVDNEIGYDFASEMFRQRVLVAGTLNNAKTIRVEPPLTLTLEQCEQVLKAARKALAALRVSVEEA
>NZ_CP026013.1|WP_008806562.1|639966_640521_-|PadR-family-transcriptional-regulator
MRHHHEEGRGPRGRHGDPSEHGDHGRRGGGRRQRFFGHGELRLIILDILSRNASHGYELIKEIETLTQGNYSPSPGVIYPTLDLLQDQGLISVEDDNGRKKIVISEEGKQLHAENQEHLAHIQERLQARMVGCELRRDPQMKRALENFKAVLDLKVNQQASSAAQLKQIIGIIDRAAMEISQLD

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Crispr_ID: NZ_CP026013_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP026013_2

3974411-3974519

Orphan

Consensus_repeat	Method
AGGGAGAGGGAGCACACCCTAAAAAAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP026013_2

>merge|NZ_CP026013|2|3974411-3974519|CRISPRCasFinder
AGGGAGAGGGAGCACACCCTAAAAAAGGCCATTGTCATTGCCTTTTTGCGTTTACCTTGCCCTCACCCCAACCCTCTCCCACAGGGAGAGGGAGCAAACCCTAAAAAAG

>NZ_CP026013|2|2|3974411-3974519|CRISPRCasFinder
AGGGAGAGGGAGCACACCCTAAAAAAG	GCCATTGTCATTGCCTTTTTGCGTTTACCTTGCCCTCACCCCAACCCTCTCCCAC
AGGGAGAGGGAGCAAACCCTAAAAAAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP026013.1\|WP_012968720.1\|3977101_3978100_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224093
NZ_CP026013.1\|WP_012542475.1\|3964722_3965958_+\|PucR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|377939
NZ_CP026013.1\|WP_008805590.1\|3982803_3984909_-\|carbon-starvation-protein-CstA	unknown	unknown	gnl\|CDD\|184976
NZ_CP026013.1\|WP_016160470.1\|3979762_3980851_+\|oxidoreductase	unknown	unknown	gnl\|CDD\|182570
NZ_CP026013.1\|WP_022065145.1\|3981835_3982138_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|224937
NZ_CP026013.1\|WP_044649636.1\|3967305_3968289_+\|LacI-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380501
NZ_CP026013.1\|WP_022065143.1\|3974671_3975913_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227601
NZ_CP026013.1\|WP_012068432.1\|3980908_3981652_+\|3-oxoacyl-ACP-reductase-FabG	unknown	unknown	gnl\|CDD\|235500
NZ_CP026013.1\|WP_022065136.1\|3963463_3964726_+\|cytosine-permease	unknown	unknown	gnl\|CDD\|236821
NZ_CP026013.1\|WP_002893903.1\|3982513_3982711_-\|YbdD/YjiX-family-protein	unknown	unknown	gnl\|CDD\|225434
NZ_CP026013.1\|WP_008805601.1\|3969330_3970689_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340870
NZ_CP026013.1\|WP_022065141.1\|3972044_3973073_-\|S-methyl-5-thioribose-1-phosphate-isomerase	unknown	unknown	gnl\|CDD\|273112
NZ_CP026013.1\|WP_008805596.1\|3976016_3977081_-\|sugar-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|380528
NZ_CP026013.1\|WP_022065142.1\|3973174_3974374_+\|S-methyl-5-thioribose-kinase	unknown	unknown	gnl\|CDD\|236561
NZ_CP026013.1\|WP_022065144.1\|3978096_3979599_-\|sugar-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224053
NZ_CP026013.1\|WP_008805607.1\|3962403_3963012_-\|methylthioribulose-1-phosphate-dehydratase	unknown	unknown	gnl\|CDD\|236415
NZ_CP026013.1\|WP_008805591.1\|3982112_3982517_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP026013.1\|WP_008805604.1\|3965954_3967193_+\|cytosine-deaminase	unknown	unknown	gnl\|CDD\|181713
NZ_CP026013.1\|WP_022065139.1\|3968410_3969220_+\|inositol-monophosphatase	unknown	unknown	gnl\|CDD\|223559
NZ_CP026013.1\|WP_112293731.1\|3970715_3971984_+\|histidine-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|366031

Protein	Function_ID	Function_description	E-value
NZ_CP026013.1\|WP_012968720.1\|3977101_3978100_-\|ABC-transporter-permease	gnl\|CDD\|224093	COG1172, AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism].	3.65981e-69
NZ_CP026013.1\|WP_012542475.1\|3964722_3965958_+\|PucR-family-transcriptional-regulator	gnl\|CDD\|377939	pfam07905, PucR, Purine catabolism regulatory protein-like family. The bacterial proteins found in this family are similar to the purine catabolism regulatory protein expressed by Bacillus subtilis (PucR). PucR is thought to be a transcriptional activator involved in the induction of the purine degradation pathway, and may contain a LysR-like DNA-binding domain. It is similar to LysR-type regulators in that it represses its own expression. The other members of this family are also annotated as being putative regulatory proteins.	1.78324e-33
NZ_CP026013.1\|WP_008805590.1\|3982803_3984909_-\|carbon-starvation-protein-CstA	gnl\|CDD\|184976	PRK15015, PRK15015, carbon starvation protein CstA.	0
NZ_CP026013.1\|WP_016160470.1\|3979762_3980851_+\|oxidoreductase	gnl\|CDD\|182570	PRK10586, PRK10586, putative oxidoreductase; Provisional.	0
NZ_CP026013.1\|WP_022065145.1\|3981835_3982138_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|224937	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning].	9.18558e-09
NZ_CP026013.1\|WP_044649636.1\|3967305_3968289_+\|LacI-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|380501	cd06278, PBP1_LacI-like, ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. This group includes the ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type 1 periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.	1.15078e-95
NZ_CP026013.1\|WP_022065143.1\|3974671_3975913_-\|hypothetical-protein	gnl\|CDD\|227601	COG5276, COG5276, Uncharacterized conserved protein [Function unknown].	5.2802e-149
NZ_CP026013.1\|WP_012068432.1\|3980908_3981652_+\|3-oxoacyl-ACP-reductase-FabG	gnl\|CDD\|235500	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated.	8.6298e-87
NZ_CP026013.1\|WP_022065136.1\|3963463_3964726_+\|cytosine-permease	gnl\|CDD\|236821	PRK11017, codB, cytosine permease; Provisional.	0
NZ_CP026013.1\|WP_002893903.1\|3982513_3982711_-\|YbdD/YjiX-family-protein	gnl\|CDD\|225434	COG2879, COG2879, Uncharacterized small protein [Function unknown].	1.33159e-37
NZ_CP026013.1\|WP_008805601.1\|3969330_3970689_+\|MFS-transporter	gnl\|CDD\|340870	cd17312, MFS_OPA_SLC37, Organophosphate:Pi antiporter/Solute Carrier family 37 of the Major Facilitator Superfamily of transporters. Organophosphate:Pi antiporters (OPA) are integral membrane proteins responsible for the transport of specific organophosphates or sugar phosphates across biological membranes with the simultaneous translocation of inorganic phosphate into the opposite direction. The OPA family is also called solute carrier family 37 (SLC37) in vertebrates. Members include glucose-6-phosphate (Glc6P) transporter (also called translocase or exchanger), glycerol-3-phosphate permease, 2-phosphonopropionate transporter, phosphoglycerate transporter, as well as membrane sensor protein UhpC from Escherichia coli. UhpC is both a sensor and a transport protein; it recognizes external Glc6P and induces transport by UhpT, and it can also transport Glc6P. Vertebrates contain four SLC37 or sugar-phosphate exchange (SPX) proteins: SLC37A1 (SPX1), SLC37A2 (SPX2), SLC37A3 (SPX3), and SLC37AA4 (SPX4). The OPA/SLC37 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	8.48585e-128
NZ_CP026013.1\|WP_022065141.1\|3972044_3973073_-\|S-methyl-5-thioribose-1-phosphate-isomerase	gnl\|CDD\|273112	TIGR00512, methylthioribose-1-phosphate_isomerase_predicted, S-methyl-5-thioribose-1-phosphate isomerase. The delineation of this family was based in part on a discussion and neighbor-joining phylogenetic study, by Kyrpides and Woese, of archaeal and other proteins homologous to the alpha, beta, and delta subunits of eukaryotic initiation factor 2B (eIF-2B), a five-subunit molecule that catalyzes GTP recycling for eIF-2. This clade is now recognized to include the methionine salvage pathway enzyme MtnA. [Amino acid biosynthesis, Aspartate family].	7.03035e-151
NZ_CP026013.1\|WP_008805596.1\|3976016_3977081_-\|sugar-ABC-transporter-substrate-binding-protein	gnl\|CDD\|380528	cd06305, PBP1_methylthioribose_binding-like, similar to methylthioribose-binding protein of ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type 1 periplasmic binding protein (PBP1) superfamily. Proteins similar to methylthioribose-binding protein of ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type 1 periplasmic binding protein (PBP1) superfamily, which consists of two alpha/beta globular domains connected by a three-stranded hinge. This Venus flytrap-like domain undergoes transition from an open to a closed conformational state upon ligand binding. The sugar-binding domain of the periplasmic proteins in this group is also homologous to the ligand-binding domain of eukaryotic receptors such as metabotropic glutamate receptor (mGluR), DNA-binding transcriptional repressors such as LacI and GalR.	4.03307e-122
NZ_CP026013.1\|WP_022065142.1\|3973174_3974374_+\|S-methyl-5-thioribose-kinase	gnl\|CDD\|236561	PRK09550, mtnK, methylthioribose kinase; Reviewed.	0
NZ_CP026013.1\|WP_022065144.1\|3978096_3979599_-\|sugar-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224053	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism].	0
NZ_CP026013.1\|WP_008805607.1\|3962403_3963012_-\|methylthioribulose-1-phosphate-dehydratase	gnl\|CDD\|236415	PRK09220, PRK09220, methylthioribulose 1-phosphate dehydratase.	1.57474e-138
NZ_CP026013.1\|WP_008805591.1\|3982112_3982517_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	4.5247e-10
NZ_CP026013.1\|WP_008805604.1\|3965954_3967193_+\|cytosine-deaminase	gnl\|CDD\|181713	PRK09230, PRK09230, cytosine deaminase; Provisional.	0
NZ_CP026013.1\|WP_022065139.1\|3968410_3969220_+\|inositol-monophosphatase	gnl\|CDD\|223559	COG0483, SuhB, Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family [Carbohydrate transport and metabolism].	9.5542e-72
NZ_CP026013.1\|WP_112293731.1\|3970715_3971984_+\|histidine-phosphatase-family-protein	gnl\|CDD\|366031	pfam00328, His_Phos_2, Histidine phosphatase superfamily (branch 2). The histidine phosphatase superfamily is so named because catalysis centers on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches.The smaller branch 2 contains predominantly eukaryotic proteins. The catalytic functions in members include phytase, glucose-1-phosphatase and multiple inositol polyphosphate phosphatase. The in vivo roles of the mammalian acid phosphatases in branch 2 are not fully understood, although activity against lysophosphatidic acid and tyrosine-phosphorylated proteins has been demonstrated.	4.26928e-59

>NZ_CP026013.1|WP_022065142.1|3973174_3974374_+|S-methyl-5-thioribose-kinase
MSQYHTFTAHDAVAYAQQFAGIDNPSELVSAQEVGDGNLNLVFKVFDHQGVSRAIVKQALPYVRCVGESWPLTLDRARLEAQTLVAHYQHSPQHTVKIHHFDPELAVMVMEDLSDHRIWRGELIANVYYPQAARQLGDYLAQVLFHTSDFYLHPHEKKAQVAQFSNPAMCEITEDLFFNDPYQIHERNNYPAELEADVAALRDDAQLKLAVAALKHRFFAHAEALLHGDIHSGSIFVAEGSLKAIDAEFGYFGPIGFDIGTAIGNLLLNYCGLPGQLGIRDAAAAREQRLNDIHQLWTTFAERFQALAAEKTRDAALAYPGYASAFLKKVWADAVGFCGSELIRRSVGLSHVADIDTIQDDAMRHECLRHAITLGKALIVLAERIDSVDELLARVRQYS
>NZ_CP026013.1|WP_022065141.1|3972044_3973073_-|S-methyl-5-thioribose-1-phosphate-isomerase
MQTLQTTSLRVSENQLFILDQQALPQEKRWLAADNVALLVDHIHALRVRGAPLIGLSASLLLALLAQRGLNRDALQQALETLRAARPTAVNLMNNLDRMKQALAREDYPQALEAEALRLVEEDKQLCDRIAEAGSALVKPGSRLLTHCNTGGLATAGVGTALGVIALAHRQGKVASVWVDETRPLLQGGRLTAWELGELGVPYQLITDSMAASLMAQGQVDAVWVGADRIAANGDVANKIGTYSLAVLAHYHQIPFYVAAPQTTLDRHCPNGAAIPIEQRAAAEVTGVAGSFGAVQWAPTGAAVYNPAFDVTPAGLVSGWVLDSGVVTPAQVASGAFTPDNE
>NZ_CP026013.1|WP_112293731.1|3970715_3971984_+|histidine-phosphatase-family-protein
MMPARHQGLLRLFIACALPLLALQSAAAADWQLEKVVELSRHGIRPPTAGNREAIEAATGRPWTEWTTHDGELTGHGYAAVVNKGREEGQHYRQLGLLQAGCPTAESIYVRASPLQRTRATAQALVDGAFPGCGVAIHYVSGDADPLFQTDKFAATQTDPARQLAAVKEKAGDLAQRRQALAPAIQLLQQAVCQADKPCPIFDTPWQVEQSKSGKTTISGLSVMAKMVETLRLGWSENLPLSQLAWGKITQARQITALLPLLTENYDLSNDVLYTAQKRGSVLLNAMLDGVKPEATPNVRWLLLVAHDTNIAMVRTLMNFSWQLPGYSRGNIPPGSSLVLERWRNAKSGERYLRVYFQAQGLDDLRRLQTPDAQHPMLRQEWRQPGCRQTDVGTLCPFQAAITALGQRIDRSSAPAVAMVLP
>NZ_CP026013.1|WP_008805601.1|3969330_3970689_+|MFS-transporter
MSGIIAFFRASPPKAGAAFDEQRFRRVRWQTFIAMTLAYVTFYVCRLSFTVAKSALVDLGITPTELGMIGSTLFFSYAIGKLVNGFIADHANVVRYMSLGLLLSAGMNLMMGMTTNALLLAIFWGINGWAQSMGVGPCAVSLARWYGVKERGTFYGIWSTAHNIGEAVTYMVIAAVIAGFGWQMGYLSTAALGAAGVVLLVLFMHDSPQSSGFPSINVIRDEPQEEAEARGSVFKNQLLALRNPALWTLALASAFMYIDRYAVNSWGIFFLEQDKAYSTLEASGIIGVNAIAGIAGTIIAGMLSDRFFPRNRSVMAGFISLLNTAGFALMLWSPHNYYTDILAMIIFGATIGALTCFLGGLIAVDISSRKAAGAALGTIGIASYAGAGLGEFLTGIIIDKTAILENGKTLYDFSTLALFWVGTGLGSALLCFTTAAIVARRHAVERQTSFSS
>NZ_CP026013.1|WP_022065139.1|3968410_3969220_+|inositol-monophosphatase
MQSKESEALQARYRLACELAKAGAELAFEYYQQREALTVDHKGNDLQDVVSVADKRVEAFVKQRIQSAFPQDGFLGEESGTRLPDARILWVVDPIDGTSCFLNGLHTWCLSLAIVADGEPVIGVVYDPNHRELFHALRGHGAWLNDAPIRPHPATTVKEGVMGVGTSHRVTPADFLPFLQALLSDGGMFIRNGSGALMSAWAAAGRLIGYYEPHMNPWDALPGLVLMREAGGASNDFLAQEGIQRGNPLLLASQTLYPQLKKMIPQPLH
>NZ_CP026013.1|WP_044649636.1|3967305_3968289_+|LacI-family-DNA-binding-transcriptional-regulator
MSDKKWIKAEDVARLAGVSRSAVSRTFTPGASVSEKTRQKVLSAAEALGYQVNIIARTMITGSSNFIGIVTAGFDNPFRSKLLAPLVHQLALNGFMPLLMNADDPQQLAPSLKQLLSYHVAGVIITSGAPPLSLAEEYLARKIPVTLINRHADLAGCDRVCSDNAQGAKLVADLFCRRGWQQVGFIGENRENFSTRQRYEAFIARTSGMAVISRFCDGGGYQAGYQAARELVAENPGVQALFCATDMLALGALDGLRDAPAPLPAIVGFDDIPQADWQPYQLTTVQQNTALLAHHAVDLLMTRIARFSLPSRHREVPVKLIIRHSAK
>NZ_CP026013.1|WP_008805604.1|3965954_3967193_+|cytosine-deaminase
MKIINARLRRQEALFTLDLQDGMIHRISAQAAMQSADAGDIDAQGRLAIPPFVEPHIHLDATLTAGEPEWNRSGTLFEGITRWSQRKASITPEDTRQRALKTIGMLRDFGVQHVRTHVDVTDPSLAALKALLAVKQEAADLIDLQIVAFPQEGIESYPDGRGLMTRAIEMGADVVGGIPHYENTRDKGVSSVMFLMDLAQRYGRLVDVHCDEIDDPQSRFLEVLAEEARVRGMGAQVTASHTCAMGSYDNAYCSKLFRLLKASGINFISCPTESIHLQGRFDSWPKRRGVTRVAELDRAGINVCFAQDSIQDPWYPLGNGNILRILDAGLHICHMLGYDDLQRCLDFVTDNSARALCLGDNYGLAEGRPANLLILDAENDYEAVRRQARVLTSIRHGKVILQREVEHIRYPA
>NZ_CP026013.1|WP_012542475.1|3964722_3965958_+|PucR-family-transcriptional-regulator
MSLTVSELLALEGLSALRLRAGKQGLQRAVRWYYVAENEHIAEWIMGGELVFITGINHPRDEANLIQLLMEGKQRGIAGMVILTGEAYIHAIPATLIALADELGIPLIEQPYLLKMVIVTERIGTALVRSENALQSQRDILMQLVTGDYPDLQMLHQRALHQQLDFTRPLRLAALRLEGLSRLFRQFPPEQAEAWLLQAHRSVRQQLQQQLNQQGNPFPLLERSNMFLFLLPDEEGEGFQQKKWLQQWLQALADGEEGLSLLCGLSAPVRQLQGYPRALSQARQALDLCDTLRPTQRISDYQQLGFIKLLSAVSDPALLNDFMHDTLGCLIEPGRKAPWLLLETLETLLQENGNVVRAADRLGLHRNTLHQRIQRIEKLTGYPVSHPQFHLNASVALVIWRLSQNHLQDPP
>NZ_CP026013.1|WP_022065136.1|3963463_3964726_+|cytosine-permease
MSNSNDFPLVEAPAAGRKGVFSIAMVLFSFTFFTGTMFAGGKLGVSFSIVNLLWIAVIGNALLALYAASLGWIAARSGLNTVLMGRFCFGEIGSKLADFILGFAELGWYAWGTATVAISLVKILALPEALTQPLMVLFGILFCVTALVGYKGLDALSRLSVPLMFVLLMVSMYLALHHAGGWQAMTRIAPSDTMTWSAAITMVFGTFASGATQATNWTRLANSSRTAILASMGSFLIGNGLMIVAGAWCAIVYQQADIVEVLILQGLSVAAVIMLCLNLLTIQGPTIYNVSAAACHLLRSERRRTLTLAAAGVGIVLAIGGMYEMLIPFLVLLGSIIPPIGGVILADYWFARGGRYPLLQNARLPRFNWLGLGAYAAGAVVAYLSPWIAPLVGITVSALVYIVLSLLSKRQPAAVAEQEP
>NZ_CP026013.1|WP_008805607.1|3962403_3963012_-|methylthioribulose-1-phosphate-dehydratase
MWQERLAQLVTTCHWIGAKGWAPATGGNMSVRQDDTWCWLSESGRDKGSLTTEDFLQVEIATNQAPSGRKPSAETGLHTLVYRLFPEANVVLHVHTVNATVLSRIEKSDTLALQGYEMQKTLSGQHSHLDTVPVAIFDNDQDIDALAARIADYAQTRPLRYGFLLRGHGLTCWGKDIQEARRQLEGLEFLFECELMRRRYEP
>NZ_CP026013.1|WP_022065143.1|3974671_3975913_-|hypothetical-protein
MSALPSPEYSRNMRLIGHSDQGGRPDGVQLMVHRGFAYIGHMVSQGFSVVDVRDPTRPTTVNYIAAPPGTWNVHLQAHDDLLLVINARDLFADARFADEKVYYTRSVGDTVSDVQDKGWSAGLRIFDISTPAQPREISFLSLNGIGIHRIWYVGGRWAYVSALIDGFTDYIFLTIDLADPRKPEVAGRWWLPGMHQAGGETPDWPQGKRYALHHAIIAGDTAYGSWRDGGLTLLDVKDRTQPTLISHRNWSPPFGGGTHTALPLPDRDLLVVLDEAVLDNQEDGEKLIWLFDIREPANPVSISTFPQPDEIDYVAKGAHFGPHNLHENRPGSFVSSTLIFATYQNAGVRAYDISNPYRPLETGALVPAAPKTMMDTRPGRPQVIQSCDVFVDAQGIIYSTDYNGGLSVIEYLG
>NZ_CP026013.1|WP_008805596.1|3976016_3977081_-|sugar-ABC-transporter-substrate-binding-protein
MKKIALSLMTLGLLQSTAALATAPTPVPAAIAEHSGPIRIAVIRNLGSDDNTTQFVSGALQEGKKLGFKISTFLSNGDDAKFQDFVNQAISQKYDGIILSQGRDPYSTALVKKAVDAGIKVAVFDTAVSGEIPGVTVSQQDDASLTELSFGQLVKDFNGKANIVKLWVAGFPPMERRQAAYQTLLKQNPGIKELESIGAVSSDVQGDTANKVGAILAKYPKGKIDAIWGTWDAFSQGAYKALKENGRTEIKLYSIDISNQDLQLMREAGSPWKVSVAVDPKLIGATNVRLIANKIAGEPTPATYDFKAAAIPQALLAAQPGAVNVASLGKIIPGWGQTEDFIAPWFATLEAKNK
>NZ_CP026013.1|WP_012968720.1|3977101_3978100_-|ABC-transporter-permease
MSKALAVNATVSGRQRFFDFLYKWGMLLTVVLLVAVFGLASDNFLDPFNIINILRSIAIVTVIAIGVSISLTIGGFDLSVGSTASLANALVISLFVWHGLGTTEAILITLALCTLVGLFNAFLIVVLRIPDMLATLASLFVIQGVAMTYSYGGSITENMVLPSGEMAEGTIPAGFGALGQVPTIVIIMLVVTLVAQLALSFTTHGRRMYAIGGNPEAARLSGLRITRYKVAAYVIASLLAGLGGILLASRIGSSQVNAGGGYLMDAVAAAWIGFSLAGSGKPNALGTLVGAVILGVLSNGLVMLSVPYYAMDIIKGLVLAGALALTYFQRRT
>NZ_CP026013.1|WP_022065144.1|3978096_3979599_-|sugar-ABC-transporter-ATP-binding-protein
MSANRLEMHNISLAFYGFQALNKVDFTLHGGSVHALTGANGAGKSTLMAVLCGTHAHYEGEVTINNQPVTIRSPRDAKQLGIHLVQQEVDVALVPGLSIAENIMLDRLAEPGMAFRWSRVRQLAREALAQLDVALDVRRSIDSCTLAEKQQILLARALSHHCRFLILDEPTAPLDQHESERLFAVVRRLQQQGIGVVFISHRIHELKAICDTLTVLRDGRLIESGPMAPLSGEQIVEKMLGHELSDIFPPPRPPHGEEVLLQIDGLHDEALLQDISLRLRKGEILGIAGLAGAGKTELCKALFGASKSRVQRGELNGQPWRPRDPADSVGRGLALVPEERRKEGIFIEEPIAMNLAVSADNSFSRWSLFGHRQAWRWAEEVIARLGVRATGPGQMLRRLSGGNQQKVAIGKWLRSHANVLIFDEPTKGVDVKAKTDLFMLIDGLAREGKGVIYASGEFAELVGLCDRICVLWDGRIVAEIPGAEAREETLLYYSTGGAAA
>NZ_CP026013.1|WP_016160470.1|3979762_3980851_+|oxidoreductase
MSNSDIRVVPGPANYFSHPGSLERLSDFFSADQLSRAVWVYGERALAGAEPFLPAAFHLPEAKKIRFPGHCSERDVAALVQASGDDRAVVIGVGGGALLDSAKVLARRLGVPLVAIPTIAATCAAWTPLSVWYSDAGQALNFEIFDDANFLVLVEPRIILNAPAEYLLAGIGDTLAKWYEAVVLAPQPEALPLTVRLGINGALAIRDVLLASSETALADQRRGDLTQAFRDVVEAIIAGGGMVGGLGERYTRVAAAHAVHNGLTVLPQTDKFLHGTKVAYGILVQSALLAQDDVLAQLVQAYQRFNLPTTLAALEVDINNRTELDRVIAHTLRPGESIHYLPVTLTPEVLRAAFEKVEYFSR
>NZ_CP026013.1|WP_012068432.1|3980908_3981652_+|3-oxoacyl-ACP-reductase-FabG
MQIDLTGKKALVTGASRGLGRAIALSLARAGADVVITYEKSADKAQAVADEIKALGRHGEAVQADSASAQAIQEAVTHAARSLGGLDILVNNAGIARGGPLESMTLADIDALINVNIRGVVIATQEALVHMADGGRIINIGSCLANRVAMPGIAVYAMTKSALNALTRGLARDLGPRGITVNLVHPGPTNSDMNPEDGEQAEAQRQMIAVGHYGQPEDIAAAVTFLASPAAGQISGTGLDVDGGLNA
>NZ_CP026013.1|WP_022065145.1|3981835_3982138_+|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MKIVWSKTADKPFSKIDNRYKSRIKSRLEKMDDKASPISDIKKLSSPENHYRLRLGDYRVIYTFGDPPGDTCYVVAVKRRTTTTYLHEEDTEYDYSVHQG
>NZ_CP026013.1|WP_008805591.1|3982112_3982517_+|helix-turn-helix-transcriptional-regulator
MTIQYIKDEEGKDQYVVIPYSDYFRMRLALLEYDDEDESDWEDIPYESDIYDNVMLPGEVCDVMHKENVSLQAAWRILRGLSQQEVAAKLGISQSAVSQLEALDSRPQKRTREKLAAIYGCTQEQISLYLPKEG
>NZ_CP026013.1|WP_002893903.1|3982513_3982711_-|YbdD/YjiX-family-protein
MFDTLSKAGKYLGQAAKMMIGVPDYDNYVEHMRITHPDQTPMTYEEFFRERQDARYGGKGGAKCC
>NZ_CP026013.1|WP_008805590.1|3982803_3984909_-|carbon-starvation-protein-CstA
MNNSGKYLIWTLLSVIGAFALGYIALNRGEQINALWIVVAAVCVYLIAYRFYGLYIAKTVLGVDPTRMTPAVRHNDGLDYVPTDKKVLFGHHFAAIAGAGPLVGPVLAAQMGYLPGMIWILAGVVLAGAVQDFMVLFVSTRRDGRSLGELVKEEMGPTAGVLALVACFMIMVIILAVLAMIVVKALTHSPWGTYTVAFTIPLAIFMGIYIRYLRPGRIGEVSVIGLVMLVFAIISGGWVAESPTWAPWFDYTGVQLTWILVGYGFVAAVLPVWLLLAPRDYLSTFLKIGTIVGLAIGILIMRPTLTMPALTKFVDGTGPVWSGNLFPFLFITIACGAVSGFHALISSGTTPKMLANEGQACFIGYGGMLMESFVAIMALVAACIIDPGVYFAMNSPMAVLAPAGTTDVVASAAQVVSGWGFSITPDTLHQIASEVGEQSIISRAGGAPTLAVGMAYILHGSLGGLMDVSFWYHFAILFEALFILTAVDAGTRAARFMLQDLLGVISPGLKKTSSLPANLLATALCVLAWGYFLHQGVVDPLGGINTLWPLFGIANQMLAGMALMLCAVVLFKMKRQRYAWVALLPTSWLLICTLTAGWQKSFSPDTKVGFLAIANKFQAMIDSGNIPPQYTESQLAQLVFNNRLDAGLTIFFMIVVVVLALFSIKTALAALKEDKPTAKETPYQAMPADAQTITAQAKRAH

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Crispr_ID: NZ_CP026013_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP026013_3

4713463-4713568

Orphan

Consensus_repeat	Method
GGGAGAGGGTTGGGGTGAGGGCAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP026013_3

>merge|NZ_CP026013|3|4713463-4713568|CRISPRCasFinder
GGGAGAGGGTTGGGGTGAGGGCAAGGTAAATGCAAAAAGGCAACGCAAGTTGCCTTTTTTAGGGTTTGCTCCCTCTCCCACCGGGAGAGGGTTGGGGTGAGGGCAA

>NZ_CP026013|3|3|4713463-4713568|CRISPRCasFinder
GGGAGAGGGTTGGGGTGAGGGCAA	GGTAAATGCAAAAAGGCAACGCAAGTTGCCTTTTTTAGGGTTTGCTCCCTCTCCCACC
GGGAGAGGGTTGGGGTGAGGGCAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP026013.1\|WP_012542918.1\|4709156_4709486_-\|trp-operon-repressor	unknown	unknown	gnl\|CDD\|179289
NZ_CP026013.1\|WP_008807519.1\|4709574_4711512_-\|murein-transglycosylase	unknown	unknown	gnl\|CDD\|183236
NZ_CP026013.1\|WP_002887784.1\|4722583_4723363_-\|deoxyribose-phosphate-aldolase	unknown	unknown	gnl\|CDD\|235387
NZ_CP026013.1\|WP_012542920.1\|4717305_4717953_+\|YtjB-family-periplasmic-protein	unknown	unknown	gnl\|CDD\|236885
NZ_CP026013.1\|WP_022065751.1\|4717952_4718969_+\|lipoate--protein-ligase-LplA	unknown	unknown	gnl\|CDD\|179655
NZ_CP026013.1\|WP_012542917.1\|4706344_4706818_-\|protein-CreA	unknown	unknown	gnl\|CDD\|236752
NZ_CP026013.1\|WP_022065752.1\|4721147_4722470_-\|thymidine-phosphorylase	unknown	unknown	gnl\|CDD\|180276
NZ_CP026013.1\|WP_012968984.1\|4711740_4713408_+\|energy-dependent-translational-throttle-protein-EttA	unknown	unknown	gnl\|CDD\|236992
NZ_CP026013.1\|WP_012542919.1\|4716229_4717201_-\|phosphoserine-phosphatase	unknown	unknown	gnl\|CDD\|182988
NZ_CP026013.1\|WP_022065753.1\|4723779_4724565_-\|TatD-related-deoxyribonuclease	unknown	unknown	gnl\|CDD\|171118
NZ_CP026013.1\|WP_008807517.1\|4708654_4709170_+\|non-canonical-purine-NTP-phosphatase	unknown	unknown	gnl\|CDD\|235336
NZ_CP026013.1\|WP_002887802.1\|4713583_4714816_-\|multifunctional-transcriptional-regulator/nicotinamide-nucleotide-adenylyltransferase/ribosylnicotinamide-kinase-NadR	unknown	unknown	gnl\|CDD\|236151
NZ_CP026013.1\|WP_112293747.1\|4704218_4705643_-\|two-component-system-sensor-histidine-kinase-CreC	unknown	unknown	gnl\|CDD\|236846
NZ_CP026013.1\|WP_016160264.1\|4719871_4721095_-\|phosphopentomutase	unknown	unknown	gnl\|CDD\|235430
NZ_CP026013.1\|WP_002887800.1\|4714837_4716220_-\|DNA-repair-protein-RadA	unknown	unknown	gnl\|CDD\|273067
NZ_CP026013.1\|WP_008807513.1\|4705642_4706332_-\|two-component-system-response-regulator-CreB	unknown	unknown	gnl\|CDD\|236838
NZ_CP026013.1\|WP_008807515.1\|4707027_4707897_+\|MDR-efflux-pump-AcrAB-transcriptional-activator-RobA	unknown	unknown	gnl\|CDD\|185076
NZ_CP026013.1\|WP_002887789.1\|4719049_4719769_-\|purine-nucleoside-phosphorylase	unknown	unknown	gnl\|CDD\|180275
NZ_CP026013.1\|WP_072194058.1\|4702799_4704155_-\|cell-envelope-integrity-protein-CreD	unknown	unknown	gnl\|CDD\|236960
NZ_CP026013.1\|WP_008807516.1\|4707893_4708541_-\|phosphoglycerate-mutase-GpmB	unknown	unknown	gnl\|CDD\|179583

Protein	Function_ID	Function_description	E-value
NZ_CP026013.1\|WP_012542918.1\|4709156_4709486_-\|trp-operon-repressor	gnl\|CDD\|179289	PRK01381, PRK01381, trp operon repressor.	3.49334e-51
NZ_CP026013.1\|WP_008807519.1\|4709574_4711512_-\|murein-transglycosylase	gnl\|CDD\|183236	PRK11619, PRK11619, lytic murein transglycosylase; Provisional.	0
NZ_CP026013.1\|WP_002887784.1\|4722583_4723363_-\|deoxyribose-phosphate-aldolase	gnl\|CDD\|235387	PRK05283, PRK05283, deoxyribose-phosphate aldolase; Provisional.	0
NZ_CP026013.1\|WP_012542920.1\|4717305_4717953_+\|YtjB-family-periplasmic-protein	gnl\|CDD\|236885	PRK11246, PRK11246, YtjB family periplasmic protein.	1.09556e-147
NZ_CP026013.1\|WP_022065751.1\|4717952_4718969_+\|lipoate--protein-ligase-LplA	gnl\|CDD\|179655	PRK03822, lplA, lipoate-protein ligase A; Provisional.	0
NZ_CP026013.1\|WP_012542917.1\|4706344_4706818_-\|protein-CreA	gnl\|CDD\|236752	PRK10756, PRK10756, protein CreA.	4.50228e-120
NZ_CP026013.1\|WP_022065752.1\|4721147_4722470_-\|thymidine-phosphorylase	gnl\|CDD\|180276	PRK05820, deoA, thymidine phosphorylase; Reviewed.	0
NZ_CP026013.1\|WP_012968984.1\|4711740_4713408_+\|energy-dependent-translational-throttle-protein-EttA	gnl\|CDD\|236992	PRK11819, PRK11819, putative ABC transporter ATP-binding protein; Reviewed.	0
NZ_CP026013.1\|WP_012542919.1\|4716229_4717201_-\|phosphoserine-phosphatase	gnl\|CDD\|182988	PRK11133, serB, phosphoserine phosphatase; Provisional.	0
NZ_CP026013.1\|WP_022065753.1\|4723779_4724565_-\|TatD-related-deoxyribonuclease	gnl\|CDD\|171118	PRK11449, PRK11449, metal-dependent hydrolase.	3.80038e-150
NZ_CP026013.1\|WP_008807517.1\|4708654_4709170_+\|non-canonical-purine-NTP-phosphatase	gnl\|CDD\|235336	PRK05074, PRK05074, non-canonical purine NTP phosphatase.	7.98477e-112
NZ_CP026013.1\|WP_002887802.1\|4713583_4714816_-\|multifunctional-transcriptional-regulator/nicotinamide-nucleotide-adenylyltransferase/ribosylnicotinamide-kinase-NadR	gnl\|CDD\|236151	PRK08099, PRK08099, multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR.	0
NZ_CP026013.1\|WP_112293747.1\|4704218_4705643_-\|two-component-system-sensor-histidine-kinase-CreC	gnl\|CDD\|236846	PRK11100, PRK11100, sensory histidine kinase CreC; Provisional.	0
NZ_CP026013.1\|WP_016160264.1\|4719871_4721095_-\|phosphopentomutase	gnl\|CDD\|235430	PRK05362, PRK05362, phosphopentomutase; Provisional.	0
NZ_CP026013.1\|WP_002887800.1\|4714837_4716220_-\|DNA-repair-protein-RadA	gnl\|CDD\|273067	TIGR00416, DNA_repair_protein_RadA_homolog, DNA repair protein RadA. The gene protuct codes for a probable ATP-dependent protease involved in both DNA repair and degradation of proteins, peptides, glycopeptides. Also known as sms. Residues 11-28 of the SEED alignment contain a putative Zn binding domain. Residues 110-117 of the seed contain a putative ATP binding site both documented in Haemophilus (SP:P45266) and in Listeria monocytogenes (SP:Q48761) . for E.coli see ( J. BACTERIOL. 178:5045-5048(1996)). [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP026013.1\|WP_008807513.1\|4705642_4706332_-\|two-component-system-response-regulator-CreB	gnl\|CDD\|236838	PRK11083, PRK11083, DNA-binding response regulator CreB; Provisional.	2.77583e-155
NZ_CP026013.1\|WP_008807515.1\|4707027_4707897_+\|MDR-efflux-pump-AcrAB-transcriptional-activator-RobA	gnl\|CDD\|185076	PRK15121, PRK15121, MDR efflux pump AcrAB transcriptional activator RobA.	0
NZ_CP026013.1\|WP_002887789.1\|4719049_4719769_-\|purine-nucleoside-phosphorylase	gnl\|CDD\|180275	PRK05819, deoD, DeoD-type purine-nucleoside phosphorylase.	7.43873e-174
NZ_CP026013.1\|WP_072194058.1\|4702799_4704155_-\|cell-envelope-integrity-protein-CreD	gnl\|CDD\|236960	PRK11715, PRK11715, cell envelope integrity protein CreD.	0
NZ_CP026013.1\|WP_008807516.1\|4707893_4708541_-\|phosphoglycerate-mutase-GpmB	gnl\|CDD\|179583	PRK03482, PRK03482, phosphoglycerate mutase GpmB.	6.63469e-161

>NZ_CP026013.1|WP_012968984.1|4711740_4713408_+|energy-dependent-translational-throttle-protein-EttA
MAQFVYTMHRVGKVVPPKRHILKNISLSFFPGAKIGVLGLNGAGKSTLLRIMAGIDTEIEGEARPQPGIKIGYLPQEPQLNPEHTVRESVEEAVAEVVNALKGLDEVYAKYAEPDADFDKLAAQQGKFEEIIQAHDGHNLNVQLERAADALRLPDWDAKIANLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLERFLHDFEGTVVAITHDRYFLDNVAGWILELDRGEGIPWEGNYSSWLEQKDQRLAQEASQEAARRKSIEKELEWVRQGAKGRQSKGKARLARFEELNNVEYQKRNETNELFIPPGARLGDKVLEVSHLRKSYGDRVLIDDLSFSVPKGAIVGIIGPNGAGKSTLFRMMSGQEQPDSGTITLGETVKLASVDQFRDAMDNSKTVWEEVSGGLDIMKIGNTEMPSRAYVGRFNFKGVDQGKRVGELSGGERGRLHLAKLLQVGGNVLLLDEPTNDLDIETLRALENALLEFPGCAMVISHDRWFLDRIATHILDYQDEGKVEFFEGNFTEYEEYKKRTLGADALEPKRIKYKRIAK
>NZ_CP026013.1|WP_008807519.1|4709574_4711512_-|murein-transglycosylase
MEKAKKMAWHLLAASVGLLTLSQLAHADSLDEQRNRYAQIKQAWDNRQMDVVDQLMPTLSTYPLYPYLQYRQITDDLMNQPALVVKNFIDANPTLPPARSLRSRFVNELARRSDWRGLLAFSPDKPTSTEAQCNYYYAKLSVGQSQEAWSGAKDLWLTGKNQPGACEPLFSAWRDSGQQDPLAYLERIRLAMKAGNIGLVKSLAQQMPGNYQSIASAVVALANDPNSVLTFARTTGATDFTRQMAAVAFASVARQDVENARLMIPSLVQAQQLNEDQTQELRDIVAWRLMGTDVTEEQAIWRDDAIMRSQSTPLVERRVRMALGTGDRHGLNTWLARLPMEAKEKDEWRYWQADLLLERGRDEEAQAILRSLMQQRGFYPMVAAQRLGEEYTFRIDKASGTIDPALASGPEMARVRELMYWNMDNTARTEWANLVTSRTKSQQAQLARYAFDQHWWDLSVQATIAGKLWDQLEERFPLAYNDLFARYISGKDIPQSYAMAIARQESAWNPKVRSPVGASGLMQIMPGTATHTVSMFSIPGYSGPSQLLDPETNINIGTSYLQYVYQQFGNNRIYASAAYNAGPGRVRTWQGNSAGRIDAVAFVESIPFSETRGYVKNVLSYDAYYRYFMGQQDKLFSDAEWRQRY
>NZ_CP026013.1|WP_012542918.1|4709156_4709486_-|trp-operon-repressor
MTQQSPYSAAVAEQRHQEWLRFVALLQQAYAEDLHLPLLQLMLTPDEREALGTRVRIIEELLRGEMSQRELKNELGAGIATITRGSNSLKSAPAELRQWLEQTLLTSDK
>NZ_CP026013.1|WP_008807517.1|4708654_4709170_+|non-canonical-purine-NTP-phosphatase
MHHVVSATTNPAKIQAILQAFNEIFGEGSCHIESVSVESGVPEQPFGSEETRAGARNRVANARLVQPSADFWVAIEAGIDDGSTFSWVVIESADRRGEARSATLPLPEVILEQVRAGEALGPVMSQYTGIDQIGRKEGAIGVFTGGKLTRSSVYHQAVVLALSPFHNAIYR
>NZ_CP026013.1|WP_008807516.1|4707893_4708541_-|phosphoglycerate-mutase-GpmB
MLQVYLVRHGETQWNAERRIQGQSDSPLTAHGERQAWQVGERARTLGITHIITSDLGRTRRTAEIIAEACGCSVIADARLRELDMGVLEKRHIDSLSDEEEGWRRQLVNGTPDGRIPQGESMQELSERMHAALASCLELPAGSRPLLVSHGIALGCLVSTILGLPAYAERRLRLRNCSISRVDYQQSPWLASGWVVETAGDVSHLDAPAMDELQR
>NZ_CP026013.1|WP_008807515.1|4707027_4707897_+|MDR-efflux-pump-AcrAB-transcriptional-activator-RobA
MDQAGIIRDLLSWLEGHLDQPLSLDNVAAKAGYSKWHLQRMFKDVTGHAIGAYIRARRLSKSAVALRLTARPILDIALQYRFDSQQTFTRAFKKQFSLTPALYRRSPDWSSFGMRPPLRLGEFTLPKHEFVALPTTQLLGVTQSYTCKLEEISDFRNQMRVQFWRDFLGNSPSIPPVLYGLHEPRPSLEKDDEQEVFYTTALTPEMANGHLQNAHPVTLEGGEYVMFTYEGLGTGLQEFILTVYGTCMPMLNLTRRKGLDIERFYPEDENRDQATPIQLRCEYLIPIRR
>NZ_CP026013.1|WP_012542917.1|4706344_4706818_-|protein-CreA
MKYKKFAMGLLLLAGCQMAQAEQIGSVDTVFKWLGPDHKIVVEAFDDPDVQNVTCYISRAKTGGIKGGLGLAEDTSDAAISCQQVGPIELTDKIKNGKSQGDVVFQKRTSLVFKKLQVVRFYDAKRNALVYLTYSDKVVDGSPKNAISAVPIMPWNK
>NZ_CP026013.1|WP_008807513.1|4705642_4706332_-|two-component-system-response-regulator-CreB
MQQPRIWLVEDEQSIADTLVYPLQQEGFQVTVFGRGLPALEAAAHQAPDVAILDVGLPDISGFELCRRMLTRYPALPVLFLTARSDEVDKLLGLEIGADDYIAKPFSPREVCARVRTVLRRLQKFAAPSPVVRVGEFVLDEQAASISWFGQPLNLTRYEFLLLKTLLHAPGRVFSRQQLMELVWSDAWESLDRTVDTHIKTLRAKLRAVNPEVTPINTHRGMGYSLGRG
>NZ_CP026013.1|WP_112293747.1|4704218_4705643_-|two-component-system-sensor-histidine-kinase-CreC
MRIGMRLLLGYFLIVAIAAWFVLSIFVQEVKPGVRGATEGTLNDTATLLAALAREDLQAANPQQGRLAQAFQQLNQQPINAHIGGIKKVRNEYRVYLTDARGKVVFDSSGQATGQDYSRWNDVWLTLRGQYGARSTRSDPHDETSSVMYIAAPVMDKGRIIGVLSVGKPNLAMTPVIKRSERRILWAGGALLGIALLIGVGVVWWINFSIGKLVRYADSVTAERPLPLPEVGSSELRKLAQALESMRVKLEGKNAIENYVYDLTHELKSPLAAIRGAAEILREGPPPEVAARFTDNILAQNTRMQLLVERLLQQARLESRLEIKPQPVSIDALYQRLTEERDIALAAKAITLRWRESGMLVNGDGELLAQALGNLLDNAIDFTPQGGEIALAAEKRNEEVQLSVIDNGCGIPDYALERIFERFYSLPREDGHKSNGLGLAFVREVARLHHGDINLHNRPEGGVVATLRLHRPFT
>NZ_CP026013.1|WP_072194058.1|4702799_4704155_-|cell-envelope-integrity-protein-CreD
MKSPLFWKITTLIGCVVLLSLPLMMVRELINERADYRSEVVDAIEQSTSGSQKLAGPLIAIPVTETLTRMENQKEVNYQRSWEYYWLPESLAVTGKQTVESRRVGIYSGQVWHNALQIKASFDPLRLAALRKTNIVLGQPRLVVSVGDARGIGAIHAPEINGNVLSVEPGLGISGDGAGIHMPMPALAEDNKPLEIAFSLDLNGTGEFSLVPIGRNSELQLTSNWPHPGFLGSFLPTQREVSAAGYRAHWQSSWFANDMGSYFKDDMEIPWSRLPAFSADVMSLADQYQLTDRATKYAILLIGLTFMAFFVFESLTRRPLHPMQYLLVGLSLVLFYLVLLALSEHVGFTAAWLAASLSGAVMNGVYLQAVLRGWRNSLLFVAALLLLDGVMWFLLHSEDSALLLGTGVLVLALSVLMFLTRRVDWYALSLPKGSAPPPPAADDDKLRLWKE
>NZ_CP026013.1|WP_002887802.1|4713583_4714816_-|multifunctional-transcriptional-regulator/nicotinamide-nucleotide-adenylyltransferase/ribosylnicotinamide-kinase-NadR
MSSFDYLKSAIKQKGCTLQQVAEASGMTKGYLSQLLNAKIKSPSAQKLEALHRFLGLEFPRRQKSVGVVFGKFYPLHTGHIYLIQRACSQVDELHIIMGYDDTRDRELFEESAMSQQPTVPDRLRWLLQTFKYQKNIRIHAFNEEGMEPYPHGWDVWSHGIRAFMSEKGIEPNRIYTSEEADAPQYLEHLGIETVLIDPKRTFMNISGGQIRENPFRYWEYIPTEVKPFFVRTVAILGGESSGKSTLVNKLANIFNTTSAWEYGRDYVFSHLGGDEMALQYSDYDKIALGHAQYIDFAVKYANKVAFIDTDFVSTQAFCLKYEGREHPFVQALIDEYRFDLVILLENNTPWVADGLRSLGSSVDRKEFQSLLVSLLKENEIEFVHVKESDYDARFLRCVELVKQLMGEQG
>NZ_CP026013.1|WP_002887800.1|4714837_4716220_-|DNA-repair-protein-RadA
MAKAPKRAFVCNECGADYPRWQGQCSACHAWNTITEMRIAASPQVARNERLSGYAGNAGVSKVQKLSDISLEALPRFSTGFKEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQTLCKLAEGMKTLYVTGEESLQQVAMRAHRLGLPTANLNMLSETSIEQICQIADEEKPQLMVIDSIQVMHMADVQSSPGSVAQVRETAAYLTRFAKTRGVAIVMVGHVTKDGSLAGPKVLEHCIDCSVLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGLREVSNPSAIFLSRGDEITSGSSVMVVWEGTRPLLVEIQALVDHSMMSNPRRVAVGLEQNRLAILLAVLHRHGGLQMADQDVFVNVVGGVKVTETSADLALLLAMVSSLRDRPLPQDLVVFGEVGLAGEIRPVPSGQERISEAAKHGFRRAIVPAANVPKKVPEGMQIFGVKKLSDALSVFDDL
>NZ_CP026013.1|WP_012542919.1|4716229_4717201_-|phosphoserine-phosphatase
MPNSLTWCDLPEDVSLWPGLPLSLSGDEVMPLDYHAGRSGWLLYGRGLNKRRLTDWQRELGAALVIVASWVVEDYQVIRLAGSLTPRATRLAHEAGLDVAPLGKIPHLRTPGLLVMDMDSTAIQIECIDEIAKLAGTGELVSEVTERAMRGELDFTASLRQRVATLKDADATILLQVRDALPLMPGLAQLVLKLETLGWKVAIASGGFTFFAEYLRDKLHLDAVFANELEIRDGKLTGNVLGDIVDAKYKANTLRKLAEKYEIPTAQTVAIGDGANDLPMIKAAGLGIAYHAKPKVNEQAEVTIRHADLMGVFCILSGSMNQK
>NZ_CP026013.1|WP_012542920.1|4717305_4717953_+|YtjB-family-periplasmic-protein
MVRAKLKFRLHRAVIVLICLALLVALMQGASWFSQNSQKQRNPQLEELARTLAQQVVLNLVPLMRSETPDEKRINQLLTQLTHNSRVLDAGVYDEQGDLVARSGESVEVRDRLALDGKKAGGYFNQQIVEPVPGKNGPLGYLRLTLDTHTLATEAKQVDNTTNILRLMLLLSLAIGVVLTRTLLQGKRTRWQQSPFLLTANKPVEDEDDEKKGNL
>NZ_CP026013.1|WP_022065751.1|4717952_4718969_+|lipoate--protein-ligase-LplA
MSTLRLLLSDSYDPWFNLAVEECIFRQMPATQRVLFLWRNADTVVIGRAQNPWKECNTRRMEEDHVRLARRSSGGGAVFHDLGNTCFTFMAGKPEYDKTVSTAIVLAALNSLGVTAEASGRNDLVVKTDSGDRKVSGSAYRETIDRGFHHGTLLLNADLSRLANYLNPDQKKLQAKGITSVRGRVANLVELLPGITHQHICEAIQEAFFNHYGERVDAEVISPDNTPDLPNFAETFARQSSWEWNFGQAPAFSHLLDERFRWGGVELHFDVEKGHITRAQAFTDSLNPAPLEALAARLVGCQYRAEVLQQQCEALVGDFPEQEAELKELSAWIAGSVR
>NZ_CP026013.1|WP_002887789.1|4719049_4719769_-|purine-nucleoside-phosphorylase
MATPHINAEMGDFADVVLMPGDPLRAKHIAETFLEDVREVNNVRGMLGFTGTYKGRKISVMGHGMGIPSCSIYTKELITDFGVKKIIRVGSCGAVREDVKLRDVVIGMGACTDSKVNRLRFKDHDFAAIADFGMVRNAVDAAKALGVDARVGNIFSADLFYTPDPSMFDVMEKYGILGVEMEAAGIYGVAAEFGAKALTICTVSDHIRTHEQTTAAERQTTFNDMIKIALESVLLGDKE
>NZ_CP026013.1|WP_016160264.1|4719871_4721095_-|phosphopentomutase
MKRAFIMVLDSFGIGATEDADRFGDVGADTLGHIAEACAKGEADNGRKGPLNLPNLTRLGLVKAHEGSTGKIAAGMDGNAEVIGAYAWAHELSSGKDTPSGHWEIAGVPVLFDWGYFSDHENSFPQELLDKLVKRANLPGYLGNCHSSGTVILDQLGEEHMKTGKPIFYTSADSVFQIACHEETFGLDKLYELCEIAREELTEGGYNIGRVIARPFIGDKAGNFQRTGNRHDLAVEPPAPTVLQKLVDEKNGHVVSVGKIADIYANCGITKKVKATGLDALFDATIKEMKEAGDETIVFTNFVDFDSSWGHRRDVAGYAAGLELFDRRLPELMELVGEDDILILTADHGCDPTWTGTDHTREHIPVLVYGPKVKPGSLGHRETFADIGQTIAKYFGTSDMEYGKAMF
>NZ_CP026013.1|WP_022065752.1|4721147_4722470_-|thymidine-phosphorylase
MFLAQEIIRKKRDGHALSDEEIRFFINGIRDNTISEGQIAALAMTIFFHDMSMPERVSLTMAMRDSGTVLNWKSLNLNGPIVDKHSTGGVGDVTSLMLGPMVAACGGYVPMISGRGLGHTGGTLDKLEAIPGFDIFPDDNRFREIIKDVGVAIIGQTSSLAPADKRFYATRDITATVDSIPLITASILAKKLAEGLDALVMDVKVGSGAFMPTYELSAALAEAIVGVANGAGVRTTALLTDMNQVLASSAGNAVEVREAVQFLTGEYRNPRLFDVTMALCVEMLISGKLAADDAEARAKLQAVLENGKAAEVFGRMVAAQKGPTDFVENYDHYLPTAMLSKAVYADTEGFISAMDTRALGMAVVSMGGGRRQASDTIDYSVGFTDMARLGDHVDGQRPLAVIHAKDENSWQEAAKAVKAAIKLDDKAPEITPTVYRRITE
>NZ_CP026013.1|WP_002887784.1|4722583_4723363_-|deoxyribose-phosphate-aldolase
MTDLKASSLRALKLMDLTTLNDDDTNEKVIALCHQAKTPVGNTAAVCIYPRFIPIARKTLNEQGTPDIRIATVTNFPHGNDDIDIALAETRAAIAYGADEVDVVFPYRALIAGNEQVGFELVKACKEACAAANVLLKVIIETGELKEEALIRKASEISIKAGADFIKTSTGKVPVNATPESARIMMEVIRDMGVEKTVGFKPAGGVRSAEDAQQFLAIADELFGADWADSRHYRFGASSLLASLLKALGHGDGKSASSY
>NZ_CP026013.1|WP_022065753.1|4723779_4724565_-|TatD-related-deoxyribonuclease
MSHRFIDTHCHFDFPPFAEDETASLARAAQAGVGQIIVPAISAARFNRVLALAAQHEALYAALGMHPIVIEQHADEGLAQLERCLSLRPPKLVAVGEIGLDLYRDDPQFDRQQALLEEQLRLAKRYDLPVILHSRRTHDKLAMLLKKHALPRTGVVHGFAGSLQQAERFVQLGYKIGVGGTITYPRASKTREVMARLPLSALLLETDAPDMPLNGFQGQPNRPEQVARVFDALCELRAEPAPTIEAAVMANTKSLFSALAG

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1185488 : 1192213

Enterobacteria_phage(100.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_112293555.1\|1185488_1187822_-	toprim domain-containing protein	Q7M2A8	Enterobacteria_phage	0.0e+00	83.8
WP_002889897.1\|1187833_1188154_-	hypothetical protein	NA	NA	NA	NA
WP_004177614.1\|1188150_1188411_-	hypothetical protein	NA	NA	NA	NA
WP_112293557.1\|1188482_1188932_-	hypothetical protein	Q7M298	Enterobacteria_phage	9.7e-46	69.0
WP_004177619.1\|1188924_1189224_-	hypothetical protein	Q7M2A0	Enterobacteria_phage	1.7e-25	67.4
WP_064180916.1\|1189213_1189816_-	host cell division inhibitor Icd-like protein	Q7M2A7	Enterobacteria_phage	6.1e-43	70.8
WP_112293558.1\|1190649_1191387_+	glycoprotein 3	Q7M2A2	Enterobacteria_phage	3.8e-71	60.1
WP_112293560.1\|1191383_1191629_+	hypothetical protein	Q7M294	Enterobacteria_phage	1.2e-18	56.8
WP_112293561.1\|1191646_1192213_+	Polarity suppression protein	Q7M2A1	Enterobacteria_phage	8.2e-58	63.8

DBSCAN-SWA_2

1543160 : 1582620

Klebsiella_phage(33.33%)

terminase,holin,head,protease,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012967533.1\|1543160_1543652_-\|protease	serine protease inhibitor ecotin	NA	NA	NA	NA
WP_022064830.1\|1543804_1544914_-	AI-2E family transporter	NA	NA	NA	NA
WP_022064831.1\|1545664_1546573_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_022064832.1\|1546932_1547595_+	HAD-IA family hydrolase	NA	NA	NA	NA
WP_022064833.1\|1547919_1548555_-	hypothetical protein	NA	NA	NA	NA
WP_022065440.1\|1548951_1550217_+	cation:dicarboxylase symporter family transporter	NA	NA	NA	NA
WP_022065441.1\|1550273_1550669_+	RidA family protein	NA	NA	NA	NA
WP_022065442.1\|1550708_1551641_+	ornithine cyclodeaminase family protein	NA	NA	NA	NA
WP_022065443.1\|1551637_1552549_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_022065444.1\|1552645_1553785_+	DSD1 family PLP-dependent enzyme	NA	NA	NA	NA
WP_008803987.1\|1554218_1554407_-	hypothetical protein	NA	NA	NA	NA
WP_004102265.1\|1554477_1554687_-	DUF1471 domain-containing protein	NA	NA	NA	NA
WP_022065445.1\|1555020_1555761_+	amino acid ABC transporter ATP-binding protein	A0A1V0SE00	Indivirus	1.5e-14	32.1
WP_022065446.1\|1555769_1556468_+	ABC transporter permease subunit	NA	NA	NA	NA
WP_016161566.1\|1556477_1557230_+	amino acid ABC transporter permease	NA	NA	NA	NA
WP_022065447.1\|1557219_1558062_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_008803992.1\|1558066_1558606_+	hypothetical protein	NA	NA	NA	NA
WP_022065448.1\|1558800_1559589_+	pyrroline-5-carboxylate reductase	NA	NA	NA	NA
WP_064147087.1\|1560181_1560997_+	hypothetical protein	A0A2H4J8D6	uncultured_Caudovirales_phage	1.5e-49	41.3
WP_108443346.1\|1561095_1562274_-	recombinase	A0A2D1GN00	Marinobacter_phage	2.7e-31	29.8
WP_112293576.1\|1562272_1562470_+	hypothetical protein	Q8SBE4	Shigella_phage	2.3e-12	63.5
WP_112293577.1\|1562709_1563267_+	hypothetical protein	NA	NA	NA	NA
WP_112293579.1\|1563294_1563663_+	serine/threonine protein kinase	A0A2H4FSA1	Methylophilaceae_phage	2.3e-05	30.5
WP_112293580.1\|1564044_1565094_+	site-specific DNA-methyltransferase	A5LH81	Enterobacteria_phage	1.6e-168	76.8
WP_142669431.1\|1565447_1565888_+	hypothetical protein	NA	NA	NA	NA
WP_110226810.1\|1565884_1567174_+	hypothetical protein	NA	NA	NA	NA
WP_032421481.1\|1568257_1568653_+	membrane protein	G8C7V8	Escherichia_phage	5.5e-45	72.3
WP_004899663.1\|1568639_1568921_+\|holin	phage holin family protein	K7PKN9	Enterobacterial_phage	2.9e-32	72.0
WP_086624281.1\|1568920_1569550_+	glycoside hydrolase family 19 protein	F1C591	Cronobacter_phage	2.7e-86	74.4
WP_060598773.1\|1569552_1569828_+	hypothetical protein	G8C7W1	Escherichia_phage	4.1e-15	50.6
WP_072198218.1\|1569778_1569976_+	hypothetical protein	A0A286SGR9	Klebsiella_phage	2.3e-23	91.2
WP_004886681.1\|1570064_1570406_+	cell envelope integrity protein TolA	NA	NA	NA	NA
WP_017880217.1\|1570548_1570794_+	DUF2560 family protein	A0A286N2R1	Klebsiella_phage	1.8e-14	54.3
WP_110226811.1\|1570871_1571411_+	hypothetical protein	NA	NA	NA	NA
WP_112293761.1\|1571869_1573327_+	glycosyltransferase family 2 protein	K7PKP3	Enterobacterial_phage	2.8e-259	87.4
WP_112293582.1\|1573488_1574076_+	hypothetical protein	K7PGW6	Enterobacterial_phage	4.5e-75	66.5
WP_048290404.1\|1574068_1574437_+	HNH endonuclease	S4TTG9	Salmonella_phage	1.8e-50	79.8
WP_065954149.1\|1574616_1575126_+\|terminase	terminase small subunit	S4TNN3	Salmonella_phage	6.0e-52	67.5
WP_049009922.1\|1575885_1576212_+\|head,tail	phage gp6-like head-tail connector protein	S4TSQ3	Salmonella_phage	1.1e-27	60.2
WP_032701061.1\|1576283_1576496_+	hypothetical protein	A0A286S2A5	Klebsiella_phage	1.5e-09	60.0
WP_008806068.1\|1576497_1576848_+\|head	phage head closure protein	A0A286S2A2	Klebsiella_phage	3.9e-34	62.9
WP_008806069.1\|1576840_1577326_+	HK97 gp10 family phage protein	A0A0U3TGT7	Pseudomonas_phage	1.5e-52	65.2
WP_049009917.1\|1577322_1577685_+	DUF3168 domain-containing protein	A0A286S1R1	Klebsiella_phage	3.7e-48	77.7
WP_023343204.1\|1577749_1578232_+	hypothetical protein	Q9MCU9	Escherichia_phage	7.5e-52	58.9
WP_112293584.1\|1578411_1578942_+	KilA-N domain-containing protein	A0A1V0E5P7	Salmonella_phage	7.3e-85	89.7
WP_023343206.1\|1578988_1579372_+	hypothetical protein	A0A286S1N4	Klebsiella_phage	4.1e-53	86.3
WP_112293585.1\|1579374_1579638_+\|tail	phage tail protein	A0A286S1P2	Klebsiella_phage	7.9e-40	89.7
WP_042346245.1\|1579701_1580094_+	hypothetical protein	A0A286S1N7	Klebsiella_phage	3.6e-20	42.2
WP_112293587.1\|1580163_1582620_+	DUF1833 domain-containing protein	A0A286S1S3	Klebsiella_phage	0.0e+00	87.9

DBSCAN-SWA_3

1674390 : 1742431

Escherichia_phage(40.48%)

terminase,holin,capsid,lysis,head,integrase,plate,tail,tRNA,portal

attL 1705874:1705897|attR 1738360:1738383

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_064141735.1\|1674390_1676424_-\|tRNA	methionine--tRNA ligase	A0A1V0S905	Catovirus	7.8e-26	24.4
WP_008804054.1\|1676577_1677687_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA
WP_022064805.1\|1677683_1678145_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_002912749.1\|1678119_1678437_-	nickel/cobalt homeostasis protein RcnB	NA	NA	NA	NA
WP_008804056.1\|1678620_1679520_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004180600.1\|1679509_1680853_-	NCS2 family permease	NA	NA	NA	NA
WP_022064804.1\|1680855_1682667_-	adenine deaminase	NA	NA	NA	NA
WP_008804059.1\|1682790_1683714_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_112293598.1\|1683796_1685773_-	MBL fold metallo-hydrolase	A0A2P0VMX1	Tetraselmis_virus	4.4e-159	45.1
WP_008804061.1\|1685976_1686612_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA
WP_022064803.1\|1686679_1688656_-	MBL fold metallo-hydrolase	A0A2P0VMX1	Tetraselmis_virus	1.1e-160	46.0
WP_012967567.1\|1689018_1689792_+	hydroxyethylthiazole kinase	NA	NA	NA	NA
WP_008804064.1\|1689788_1690589_+	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA
WP_004201578.1\|1690736_1691789_+	class I fructose-bisphosphate aldolase	NA	NA	NA	NA
WP_008804065.1\|1691870_1692812_-	cytochrome c biogenesis protein CcdA	NA	NA	NA	NA
WP_022065385.1\|1693018_1694386_+	mannitol dehydrogenase family protein	NA	NA	NA	NA
WP_022065384.1\|1694395_1695859_+	xylulokinase	NA	NA	NA	NA
WP_008804068.1\|1695929_1697207_+	MFS transporter	NA	NA	NA	NA
WP_022065383.1\|1697255_1697918_+	HAD-IA family hydrolase	NA	NA	NA	NA
WP_112293600.1\|1698215_1699370_+	enolase	NA	NA	NA	NA
WP_022065382.1\|1699489_1701112_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_012541059.1\|1701108_1702146_+	ABC transporter permease	NA	NA	NA	NA
WP_002912641.1\|1702142_1703048_+	ABC transporter permease	NA	NA	NA	NA
WP_022065381.1\|1703019_1703883_+	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	6.9e-08	22.9
WP_012967575.1\|1703893_1704667_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.0e-26	37.2
WP_012541062.1\|1704906_1705800_-	lipid kinase YegS	A0A1V0SBJ0	Catovirus	3.6e-15	29.8
1705874:1705897	attL	NA	NA	NA	NA
WP_004175149.1\|1705981_1706995_-\|integrase	tyrosine-type recombinase/integrase	Q83VS6	Escherichia_phage	8.1e-165	82.8
WP_016831471.1\|1707109_1707409_-	helix-turn-helix transcriptional regulator	Q1JS63	Enterobacteria_phage	5.7e-34	69.7
WP_016831472.1\|1707531_1707807_+	hypothetical protein	Q1JS60	Enterobacteria_phage	4.0e-42	85.7
WP_023323010.1\|1707973_1708474_+	hypothetical protein	M1SV55	Escherichia_phage	1.4e-80	85.5
WP_064141732.1\|1708538_1708754_+	DUF2732 family protein	NA	NA	NA	NA
WP_110247741.1\|1708770_1709046_+	hypothetical protein	S4TP00	Salmonella_phage	7.5e-25	62.8
WP_112293601.1\|1709035_1711339_+	replication endonuclease	A0A0F7LBQ2	Escherichia_phage	0.0e+00	73.7
WP_072061035.1\|1711412_1712660_+	hypothetical protein	NA	NA	NA	NA
WP_096833700.1\|1712646_1714461_+	ATP-binding protein	NA	NA	NA	NA
WP_112293603.1\|1714795_1715839_-\|portal	phage portal protein	M1SV64	Escherichia_phage	7.5e-166	81.8
WP_112293604.1\|1715838_1717608_-\|terminase	terminase ATPase subunit family protein	A0A0F7LCK3	Escherichia_phage	8.2e-306	87.9
WP_112293606.1\|1717773_1718628_+\|capsid	GPO family capsid scaffolding protein	Q94MB7	Escherichia_virus	9.6e-127	80.3
WP_112293607.1\|1718701_1719760_+\|capsid	phage major capsid protein, P2 family	S4TUA6	Salmonella_phage	1.3e-162	83.0
WP_112293609.1\|1719763_1720507_+\|terminase	terminase endonuclease subunit	Q94MJ2	Enterobacteria_phage	4.3e-99	79.5
WP_064141724.1\|1720603_1721110_+\|head	head completion/stabilization protein	U5N0S3	Enterobacteria_phage	2.7e-60	82.8
WP_064141723.1\|1721109_1721313_+\|tail	phage tail protein	A0A0F7LCN2	Escherichia_phage	5.5e-25	80.6
WP_049157366.1\|1721317_1721608_+\|holin	holin	O80308	Escherichia_phage	2.0e-36	83.7
WP_064141722.1\|1721594_1722092_+	glycoside hydrolase family 104 protein	A0A0F7LBS0	Escherichia_phage	7.4e-79	85.8
WP_112293610.1\|1722088_1722520_+\|lysis	LysB family phage lysis regulatory protein	O80310	Escherichia_phage	2.1e-42	66.2
WP_064141720.1\|1722615_1723083_+\|tail	phage tail protein	A0A0F7LA33	Escherichia_phage	2.4e-63	74.2
WP_112293612.1\|1723075_1723531_+	phage virion morphogenesis protein	O80313	Escherichia_phage	5.2e-47	66.0
WP_112293613.1\|1723532_1725062_+	hypothetical protein	NA	NA	NA	NA
WP_064141717.1\|1725150_1725792_+\|plate	phage baseplate assembly protein V	A0A0M4S6F6	Salmonella_phage	1.8e-90	76.5
WP_064141716.1\|1725788_1726136_+\|plate	baseplate assembly protein	A0A0F7LDQ1	Escherichia_phage	1.2e-43	75.7
WP_112293615.1\|1726140_1727049_+\|plate	baseplate assembly protein	F1BUP3	Erwinia_phage	4.9e-113	71.5
WP_064141714.1\|1727041_1727650_+\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	3.8e-53	53.6
WP_112293616.1\|1727646_1729692_+	SGNH/GDSL hydrolase family protein	A0A159B7I7	Klebsiella_phage	2.0e-194	56.9
WP_064141712.1\|1729701_1730457_+	hypothetical protein	A0A159B7L2	Klebsiella_phage	6.7e-108	75.3
WP_112293618.1\|1730499_1731570_+\|tail	phage tail protein	A0A0M3ULH6	Salmonella_phage	5.2e-29	44.7
WP_112293619.1\|1731679_1732861_+\|tail	phage tail sheath protein	A0A0F7LBW9	Escherichia_phage	2.7e-196	86.9
WP_064141809.1\|1732874_1733390_+\|tail	phage major tail tube protein	A0A0F7LDZ1	Escherichia_phage	8.5e-70	76.7
WP_112293621.1\|1733449_1733725_+\|tail	phage tail assembly protein	A0A0F7LDQ8	Escherichia_phage	9.2e-31	76.1
WP_014838982.1\|1733757_1733877_+\|tail	GpE family phage tail protein	A0A0F7LCR6	Escherichia_phage	2.6e-14	89.7
WP_112293623.1\|1733869_1736308_+\|tail	phage tail tape measure protein	Q858U7	Yersinia_virus	2.7e-307	75.1
WP_064141807.1\|1736319_1736799_+\|tail	phage tail protein	A0A0F7LDE8	Escherichia_phage	2.0e-65	77.1
WP_064141806.1\|1736798_1737956_+	phage late control D family protein	Q7Y4C6	Escherichia_virus	1.5e-170	78.4
WP_016831480.1\|1738040_1738262_+	DNA-binding transcriptional regulator	A0A2I8TV89	Erwinia_phage	2.9e-27	72.6
WP_008804076.1\|1738531_1739893_-\|tRNA	tRNA 5-hydroxyuridine modification protein YegQ	Q6DW11	Phage_TP	1.0e-207	94.8
1738360:1738383	attR	NA	NA	NA	NA
WP_004201558.1\|1740209_1740932_-	two-component system response regulator BaeR	W8CYM9	Bacillus_phage	8.3e-31	33.2
WP_008804077.1\|1740928_1742431_-	two-component system sensor histidine kinase BaeS	W8CYF6	Bacillus_phage	8.6e-30	28.3

DBSCAN-SWA_4

2823898 : 2834778

Escherichia_phage(87.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_080883038.1\|2823898_2827006_+	beta-galactosidase	L0N6M2	Herpes_simplex_virus	0.0e+00	59.5
WP_008804978.1\|2827060_2828326_+	MFS transporter	NA	NA	NA	NA
WP_112293660.1\|2828354_2829443_-	AAA family ATPase	A0A077SLJ9	Escherichia_phage	1.1e-207	98.3
WP_008804980.1\|2829529_2829790_-	hypothetical protein	A0A077SK33	Escherichia_phage	3.0e-39	95.3
WP_112293662.1\|2830084_2830945_+	SHV family class A beta-lactamase	A0A077SL40	Escherichia_phage	3.3e-151	96.2
WP_002210513.1\|2830962_2831724_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.9e-134	100.0
WP_014839981.1\|2831985_2832888_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	4.5e-159	99.3
WP_032419518.1\|2832899_2834165_+	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	1.9e-232	99.0
WP_112293663.1\|2834157_2834778_+	aldolase	A0A077SK32	Escherichia_phage	1.2e-113	99.0

DBSCAN-SWA_5

3333740 : 3415909

100

Klebsiella_phage(22.22%)

terminase,holin,transposase,capsid,lysis,head,protease,integrase,tail,portal

attL 3396424:3396439|attR 3422310:3422325

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_047666393.1\|3333740_3334799_-	diguanylate cyclase	A0A127AWB9	Bacillus_phage	9.4e-15	32.2
WP_047666392.1\|3335221_3336646_-\|tail	tail fiber domain-containing protein	A0A0P0IDN1	Klebsiella_phage	4.1e-98	49.2
WP_112293682.1\|3336707_3345407_-	DUF1983 domain-containing protein	Q6UAW1	Klebsiella_phage	1.6e-03	83.9
WP_014907815.1\|3345484_3346405_-	S49 family peptidase	Q6UAX7	Klebsiella_phage	9.6e-149	88.2
WP_023279520.1\|3346441_3347701_-\|portal	phage portal protein	Q6UAX8	Klebsiella_phage	1.8e-222	89.8
WP_017898992.1\|3347700_3347880_-	hypothetical protein	Q6UAX9	Klebsiella_phage	3.1e-11	57.6
WP_064277429.1\|3349271_3350147_+	hypothetical protein	NA	NA	NA	NA
WP_112293766.1\|3350187_3350778_-\|tail	tail assembly protein	Q6UAW2	Klebsiella_phage	1.2e-72	73.4
WP_112293683.1\|3350844_3352506_-\|terminase	terminase large subunit	A0A2H4JB64	uncultured_Caudovirales_phage	0.0e+00	96.9
WP_040211070.1\|3352489_3352846_-\|terminase	phage terminase small subunit P27 family	A0A2H4JHS3	uncultured_Caudovirales_phage	1.6e-59	97.4
WP_044245563.1\|3353121_3353565_-	HNH endonuclease	A0A2H4JAS8	uncultured_Caudovirales_phage	4.9e-50	63.3
WP_016160668.1\|3353564_3353858_-\|head,tail	phage gp6-like head-tail connector protein	A0A2H4JD08	uncultured_Caudovirales_phage	4.2e-42	82.5
WP_040177084.1\|3353850_3354189_-\|head	phage head closure protein	A0A2H4JHK5	uncultured_Caudovirales_phage	1.3e-21	46.8
WP_004174256.1\|3354185_3355421_-\|portal	phage portal protein	A0A2H4JFJ9	uncultured_Caudovirales_phage	1.0e-233	95.9
WP_044245572.1\|3355422_3355983_-\|head,protease	HK97 family phage prohead protease	A0A2H4JB68	uncultured_Caudovirales_phage	1.9e-99	96.8
WP_071583198.1\|3356033_3357200_-\|capsid	phage major capsid protein	A0A2H4JED2	uncultured_Caudovirales_phage	3.7e-198	91.5
WP_112293685.1\|3357441_3358209_+	hypothetical protein	NA	NA	NA	NA
WP_112293768.1\|3358212_3358722_+	hypothetical protein	NA	NA	NA	NA
WP_112293686.1\|3358756_3359017_-	hypothetical protein	NA	NA	NA	NA
WP_112293688.1\|3359231_3360596_-	AAA family ATPase	A0A2H4JFA4	uncultured_Caudovirales_phage	1.4e-244	91.2
WP_112293689.1\|3360592_3360961_-	hypothetical protein	A0A2H4JCX7	uncultured_Caudovirales_phage	9.1e-58	92.6
WP_112293691.1\|3360957_3361212_-	hypothetical protein	NA	NA	NA	NA
WP_112293693.1\|3361204_3361483_-	host cell division inhibitor Icd-like protein	NA	NA	NA	NA
WP_112293694.1\|3361616_3361811_+	toxin-antitoxin system HicB family antitoxin	NA	NA	NA	NA
WP_112293696.1\|3361837_3362659_-	DUF2971 domain-containing protein	NA	NA	NA	NA
WP_112293769.1\|3362895_3363126_-	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_112293698.1\|3363185_3363404_-	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_112293771.1\|3363396_3364632_-\|integrase	site-specific integrase	A0A2H4JB45	uncultured_Caudovirales_phage	1.5e-104	45.9
WP_112293699.1\|3365441_3365876_-\|terminase	phage terminase small subunit P27 family	A0A1J0GV10	Halomonas_phage	9.4e-30	61.9
WP_023289184.1\|3366123_3366555_-	hypothetical protein	Q6UAS0	Klebsiella_phage	1.1e-41	62.0
WP_023297386.1\|3366551_3366875_-	hypothetical protein	NA	NA	NA	NA
WP_032428746.1\|3366826_3367189_-	HNH endonuclease	Q6UAS2	Klebsiella_phage	1.2e-57	83.3
WP_023289182.1\|3367515_3367740_+	hypothetical protein	NA	NA	NA	NA
WP_049115059.1\|3367778_3368216_-	hypothetical protein	NA	NA	NA	NA
WP_016160650.1\|3369165_3369516_-	hypothetical protein	R9TPM9	Aeromonas_phage	7.9e-11	38.1
WP_032432826.1\|3369512_3370010_-	lysozyme	A0A1V0E5Q7	Salmonella_phage	1.1e-77	84.6
WP_016160648.1\|3370009_3370225_-\|lysis	phage S lysis protein	A5LH82	Enterobacteria_phage	2.7e-30	88.7
WP_001352368.1\|3370544_3371753_-\|transposase	IS4-like element ISVsa5 family transposase	A0A0F7LAS3	uncultured_marine_virus	1.8e-235	100.0
WP_139042930.1\|3372480_3372600_+	small membrane protein	NA	NA	NA	NA
WP_004147997.1\|3373368_3373572_+	hypothetical protein	NA	NA	NA	NA
WP_032432828.1\|3373815_3374418_-	hypothetical protein	H9C175	Pectobacterium_phage	4.2e-76	68.1
WP_064149226.1\|3374434_3375466_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	2.4e-95	49.3
WP_016528965.1\|3375665_3376058_-	LexA DNA binding domain-containing protein	K7PHB4	Enterobacterial_phage	6.8e-11	35.6
WP_112293701.1\|3376098_3376389_-	hypothetical protein	H6WRY6	Salmonella_phage	1.0e-16	60.9
WP_012542186.1\|3376400_3376634_-	DinI family protein	K7PM44	Enterobacteria_phage	1.7e-25	71.1
WP_047670012.1\|3377037_3378282_+	hypothetical protein	NA	NA	NA	NA
WP_032444803.1\|3378998_3379481_-	hypothetical protein	NA	NA	NA	NA
WP_016528969.1\|3379725_3380166_-	hypothetical protein	NA	NA	NA	NA
WP_072420414.1\|3380179_3380644_-	replication protein	A0A0U2JGJ0	Escherichia_phage	3.1e-63	72.2
WP_077271747.1\|3380636_3381641_-	DNA-binding protein	A0A0U2RT81	Escherichia_phage	8.6e-34	45.3
WP_046622349.1\|3381700_3382255_-	hypothetical protein	NA	NA	NA	NA
WP_071561166.1\|3382257_3382482_-	Cro/Cl family transcriptional regulator	H6WRX5	Salmonella_phage	1.3e-19	62.5
WP_077257742.1\|3382570_3383008_+	helix-turn-helix domain-containing protein	H6WRX4	Salmonella_phage	1.3e-39	62.2
WP_040234937.1\|3383329_3383644_-	hypothetical protein	NA	NA	NA	NA
WP_074399016.1\|3384033_3384228_+	DUF1482 family protein	NA	NA	NA	NA
WP_014228879.1\|3384270_3384615_+	transcriptional regulator	NA	NA	NA	NA
WP_112293702.1\|3387726_3388107_-	nitrite transporter	A0A286S2A6	Klebsiella_phage	2.9e-67	92.1
WP_023304945.1\|3388117_3388600_-	DUF1833 domain-containing protein	A0A286S2B1	Klebsiella_phage	3.3e-84	97.5
WP_071599323.1\|3388586_3389060_-	hypothetical protein	A0A286S298	Klebsiella_phage	7.8e-54	61.5
WP_085318978.1\|3389059_3391756_-\|tail	phage tail tape measure protein	K7PKR0	Enterobacteria_phage	5.8e-202	62.7
WP_032420719.1\|3391736_3392054_-\|tail	phage tail assembly protein T	A0A0K2FJB3	Enterobacteria_phage	1.4e-19	51.5
WP_020804327.1\|3392074_3392470_-\|tail	phage tail protein	M9NZD7	Enterobacteria_phage	3.7e-09	28.4
WP_023304948.1\|3392512_3392995_-	hypothetical protein	M9NYX0	Enterobacteria_phage	5.7e-60	68.6
WP_020804325.1\|3393002_3393401_-\|tail	phage tail protein	K7PHM6	Enterobacterial_phage	3.2e-40	57.8
WP_020804335.1\|3393397_3393949_-\|tail	phage tail protein	K7P7A8	Enterobacteria_phage	9.1e-54	67.9
WP_020317349.1\|3393938_3394232_-	sugar ABC transporter ATP-binding protein	NA	NA	NA	NA
WP_020804328.1\|3394224_3394551_-	DUF2190 family protein	K7PJY3	Enterobacterial_phage	4.0e-33	65.4
WP_112293703.1\|3394631_3395987_-	hypothetical protein	K7PKX4	Enterobacterial_phage	5.0e-202	60.1
WP_112293704.1\|3395931_3397431_-\|portal	phage portal protein	K7PHM5	Enterobacterial_phage	9.5e-247	83.2
3396424:3396439	attL	NA	NA	NA	NA
WP_014228569.1\|3397427_3397643_-	hypothetical protein	A5LH28	Enterobacteria_phage	7.7e-25	77.1
WP_049095303.1\|3397639_3399748_-\|terminase	phage terminase large subunit family protein	K7PH52	Enterobacterial_phage	0.0e+00	83.6
WP_014228567.1\|3399747_3400239_-	DUF1441 family protein	K7PJY2	Enterobacterial_phage	6.4e-67	84.0
WP_071785246.1\|3400559_3400745_-	hypothetical protein	Q8W634	Enterobacteria_phage	1.9e-11	61.1
WP_107334310.1\|3400811_3401072_-	hypothetical protein	NA	NA	NA	NA
WP_112293706.1\|3401297_3401543_-	DUF2560 family protein	A0A286N2R1	Klebsiella_phage	3.2e-35	97.5
WP_004886681.1\|3401685_3402027_-	cell envelope integrity protein TolA	NA	NA	NA	NA
WP_112293707.1\|3402115_3402310_-	hypothetical protein	A0A286SGR9	Klebsiella_phage	6.7e-20	86.0
WP_112293709.1\|3402263_3402536_-	hypothetical protein	A0A286N2Q8	Klebsiella_phage	5.0e-05	69.2
WP_004886674.1\|3402532_3402880_-	hypothetical protein	A0A286N2Q7	Klebsiella_phage	1.5e-38	78.3
WP_112293710.1\|3402876_3403416_-	glycoside hydrolase family 108 protein	A0A286N2Q6	Klebsiella_phage	3.3e-101	98.3
WP_112293712.1\|3403418_3403766_-\|holin	phage holin, lambda family	Q8SBE1	Shigella_phage	3.0e-39	72.0
WP_108978910.1\|3404020_3404500_+	hypothetical protein	F1C594	Cronobacter_phage	1.3e-40	56.8
WP_024623190.1\|3404582_3405161_-	DUF1133 family protein	A0A0U2S606	Escherichia_phage	9.3e-49	56.1
WP_112293713.1\|3405174_3406155_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	1.9e-134	67.2
WP_023317574.1\|3406167_3406545_-	RusA family crossover junction endodeoxyribonuclease	A0A1C9IIA0	Salmonella_phage	6.7e-48	75.2
WP_112293715.1\|3406554_3407364_-	Dam family site-specific DNA-(adenine-N6)-methyltransferase	A0A1C9II58	Salmonella_phage	6.5e-109	68.5
WP_112293716.1\|3407360_3408275_-	transcriptional regulator	H2DE83	Erwinia_phage	1.4e-30	60.6
WP_112293718.1\|3408231_3408444_-	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	1.1e-15	70.9
WP_000230161.1\|3408681_3409143_-	hypothetical protein	K7PJS5	Enterobacterial_phage	3.8e-69	87.5
WP_001191665.1\|3409177_3409420_-	helix-turn-helix transcriptional regulator	A0A1C9IHV8	Salmonella_phage	1.3e-25	80.3
WP_112293719.1\|3409517_3410213_+	helix-turn-helix transcriptional regulator	Q8HAA0	Salmonella_phage	2.1e-87	71.3
WP_112293721.1\|3410575_3410875_+	hypothetical protein	K7PJS4	Enterobacterial_phage	3.6e-12	46.7
WP_104457818.1\|3410874_3411660_+	hypothetical protein	A4JX52	Burkholderia_virus	3.8e-61	50.2
WP_040164855.1\|3411787_3412132_+	hypothetical protein	NA	NA	NA	NA
WP_048332717.1\|3412124_3412607_+	class I SAM-dependent methyltransferase	H9C170	Pectobacterium_phage	1.4e-71	81.3
WP_040164850.1\|3412603_3412879_+	hypothetical protein	NA	NA	NA	NA
WP_071592590.1\|3412875_3413148_+	hypothetical protein	K7PKM4	Enterobacterial_phage	1.7e-13	47.1
WP_000089156.1\|3413177_3413414_+	excisionase	NA	NA	NA	NA
WP_040164848.1\|3413403_3414546_+\|integrase	tyrosine-type recombinase/integrase	Q77Z02	Phage_21	4.5e-172	81.6
WP_008806032.1\|3414658_3415909_-	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	1.1e-19	92.6
3422310:3422325	attR	NA	NA	NA	NA

DBSCAN-SWA_6

3662135 : 3671582

Brazilian_cedratvirus(16.67%)

tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_022065908.1\|3662135_3663857_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	A0A2R8FG22	Brazilian_cedratvirus	1.5e-14	32.8
WP_008805841.1\|3663896_3664601_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_001040187.1\|3664951_3665170_+	translation initiation factor IF-1	NA	NA	NA	NA
WP_012542332.1\|3665288_3667568_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	3.7e-165	42.0
WP_002896520.1\|3667598_3667916_-\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	2.0e-13	45.7
WP_002896516.1\|3668241_3668463_+	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-16	61.2
WP_008805839.1\|3668529_3670470_-	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	2.9e-38	41.0
WP_008805838.1\|3670466_3671582_-	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.3e-06	52.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP026015

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 7100

Escherichia_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002904004.1\|164_1025_+	class A extended-spectrum beta-lactamase SHV-12	A0A077SL40	Escherichia_phage	2.2e-155	99.3
WP_002210513.1\|1045_1807_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.9e-134	100.0
WP_001067855.1\|2647_3352_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_001549892.1\|3744_3984_-	hypothetical protein	I6PD82	Cronobacter_phage	4.4e-21	55.1
WP_000343760.1\|4085_5306_+\|transposase	ISL3-like element ISKox3 family transposase	NA	NA	NA	NA
WP_001549893.1\|5394_6057_-	hypothetical protein	M9Q1K0	Clostridium_phage	9.7e-10	29.1
WP_000516402.1\|6437_7100_+	peptidyl-arginine deiminase	E5FFJ3	Burkholderia_phage	2.6e-07	25.2

DBSCAN-SWA_2

11700 : 12216

Tupanvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001025390.1\|11700_12216_+	DnaJ domain-containing protein	A0A2K9L588	Tupanvirus	3.3e-05	39.8

DBSCAN-SWA_3

30847 : 36225

Moraxella_phage(25.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001215543.1\|30847_31342_+	thermonuclease family protein	A0A0R6PHV6	Moraxella_phage	8.0e-17	37.3
WP_000517490.1\|31424_32687_+	ATP-binding protein	A0A1V0SKF8	Klosneuvirus	1.3e-07	31.4
WP_004199098.1\|32690_35018_+	type IA DNA topoisomerase	A0A1X9I6W8	Streptococcus_phage	8.6e-37	28.1
WP_089518920.1\|35078_36225_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	7.8e-148	93.0

DBSCAN-SWA_4

45546 : 46563

Escherichia_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001310555.1\|45546_46563_+\|transposase	IS5-like element IS5 family transposase	Q38213	Escherichia_phage	9.8e-187	99.7

DBSCAN-SWA_5

51147 : 53134

uncultured_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004201172.1\|51147_51438_+	co-chaperone GroES	A0A221S322	uncultured_virus	2.1e-17	47.8
WP_004201176.1\|51493_53134_+	chaperonin GroEL	A0A219YK78	uncultured_virus	8.2e-175	62.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP026014

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

26642 : 59994

Escherichia_phage(38.46%)

integrase,transposase

attL 32847:32860|attR 52251:52264

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004220208.1\|26642_27722_+\|transposase	IS481-like element ISKpn28 family transposase	NA	NA	NA	NA
WP_014839920.1\|29433_30708_-	translesion error-prone DNA polymerase V subunit UmuC	F1C5A5	Cronobacter_phage	2.2e-143	58.8
WP_052626781.1\|30716_31073_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	5.0e-21	47.7
WP_014839921.1\|31626_33420_-	AAA family ATPase	NA	NA	NA	NA
32847:32860	attL	NA	NA	NA	NA
WP_014839922.1\|33929_34997_-	SAVED domain-containing protein	NA	NA	NA	NA
WP_042934513.1\|35005_35476_-	hypothetical protein	NA	NA	NA	NA
WP_042934515.1\|35468_37202_-	thiamine biosynthesis protein ThiF	NA	NA	NA	NA
WP_014839923.1\|37198_38242_-	nucleotidyltransferase	NA	NA	NA	NA
WP_014839924.1\|38380_38956_-\|integrase	integrase	NA	NA	NA	NA
WP_001067855.1\|39103_39808_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000792636.1\|39900_40434_+	phospholipase D family protein	A0A1B2LRT6	Wolbachia_phage	5.8e-21	33.9
WP_014839925.1\|40606_40921_-	hypothetical protein	NA	NA	NA	NA
WP_000215515.1\|41175_41532_-	cupin domain-containing protein	NA	NA	NA	NA
WP_001293886.1\|41521_41923_-	DUF86 domain-containing protein	NA	NA	NA	NA
WP_001247892.1\|41919_42210_-	nucleotidyltransferase	NA	NA	NA	NA
WP_000427623.1\|42653_43658_-\|transposase	IS110-like element IS4321 family transposase	NA	NA	NA	NA
WP_014839926.1\|43778_44738_-	cation transporter	A0A1V0SED0	Indivirus	4.5e-08	25.3
WP_011638900.1\|44757_45324_-	recombinase family protein	A0A0C4UR34	Shigella_phage	2.2e-58	64.6
WP_001067855.1\|45428_46133_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_001752509.1\|46459_46960_+	non-heme ferritin-like protein	NA	NA	NA	NA
WP_016947617.1\|47276_48257_-\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	6.8e-185	98.8
WP_000780222.1\|48534_48816_-	helix-turn-helix transcriptional regulator	A0A2I6TC97	Escherichia_phage	1.3e-08	38.0
WP_000493286.1\|48796_49126_-	type II toxin-antitoxin system RelE/ParE family toxin	A0A088CBP5	Shigella_phage	2.4e-09	44.2
WP_001067858.1\|50168_50873_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6
WP_004896925.1\|51757_52300_+	hypothetical protein	NA	NA	NA	NA
52251:52264	attR	NA	NA	NA	NA
WP_000155092.1\|52658_53543_-	Mph(E) family macrolide 2'-phosphotransferase	NA	NA	NA	NA
WP_000052512.1\|53598_55074_-	ABC-F type ribosomal protection protein Msr(E)	A0A1B0RXA0	Streptococcus_phage	2.3e-160	59.0
WP_002001451.1\|55471_56656_-\|transposase	IS4-like element ISEc29 family transposase	A0A0F7LAS3	uncultured_marine_virus	4.5e-50	35.4
WP_002026779.1\|56704_56890_+	hypothetical protein	NA	NA	NA	NA
WP_077252464.1\|57109_57391_+	hypothetical protein	NA	NA	NA	NA
WP_000359986.1\|57371_58145_-	ArmA family 16S rRNA (guanine(1405)-N(7))-methyltransferase	NA	NA	NA	NA
WP_000050481.1\|58452_59994_-\|transposase	IS91 family transposase	NA	NA	NA	NA

DBSCAN-SWA_2

66187 : 89185

Salmonella_phage(50.0%)

integrase,transposase

attL 81541:81554|attR 90300:90313

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001143760.1\|66187_69193_+\|transposase	Tn3-like element Tn3 family transposase	Q1MVP5	Enterobacteria_phage	0.0e+00	100.0
WP_001749986.1\|69496_69949_-	NAD(+)--rifampin ADP-ribosyltransferase Arr-3	NA	NA	NA	NA
WP_032488579.1\|70045_70600_-	aminoglycoside N-acetyltransferase AAC(6')-Ib3	NA	NA	NA	NA
WP_000845048.1\|70891_71905_+\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
WP_001162012.1\|72210_72768_+	recombinase family protein	A0A1B0V7I5	Salmonella_phage	5.8e-48	81.3
WP_048336622.1\|72770_75740_+\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	72.9
WP_000427614.1\|75818_76823_+\|transposase	IS110-like element IS5075 family transposase	NA	NA	NA	NA
WP_014839931.1\|77151_77493_-	hypothetical protein	NA	NA	NA	NA
WP_017900953.1\|78080_78686_+	hypothetical protein	NA	NA	NA	NA
WP_014839932.1\|79257_80142_+	hypothetical protein	A0A1B0VDL5	Salmonella_phage	9.8e-50	41.1
WP_017900676.1\|81038_82100_-	hypothetical protein	NA	NA	NA	NA
81541:81554	attL	NA	NA	NA	NA
WP_017900677.1\|82186_82441_-	transcriptional regulator	NA	NA	NA	NA
WP_014839933.1\|82614_83748_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_024266348.1\|83808_84126_-	hypothetical protein	NA	NA	NA	NA
WP_024266349.1\|84161_85220_-	hypothetical protein	NA	NA	NA	NA
WP_014839934.1\|85223_85547_-	hypothetical protein	NA	NA	NA	NA
WP_014839935.1\|85546_86302_-	hypothetical protein	NA	NA	NA	NA
WP_014839936.1\|86298_87258_-	DNA replication protein	NA	NA	NA	NA
WP_017901130.1\|87716_88160_-	hypothetical protein	NA	NA	NA	NA
WP_042934531.1\|88261_89185_-\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	2.5e-173	97.7
90300:90313	attR	NA	NA	NA	NA

DBSCAN-SWA_3

189368 : 203091

Salmonella_phage(53.85%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014839967.1\|189368_189689_+	hypothetical protein	J9Q750	Salmonella_phage	8.2e-31	53.8
WP_014839968.1\|190370_190574_+	hypothetical protein	K7PLX1	Enterobacteria_phage	2.8e-16	64.2
WP_025999286.1\|190616_191228_+	hypothetical protein	NA	NA	NA	NA
WP_014839969.1\|191292_191538_+	hypothetical protein	S5MQM0	Escherichia_phage	6.1e-18	65.8
WP_062878103.1\|191684_191873_+	hypothetical protein	NA	NA	NA	NA
WP_017900706.1\|191865_192600_+	hypothetical protein	A0A1V0E5L5	Salmonella_phage	9.4e-14	36.3
WP_014839970.1\|192865_193090_+	hypothetical protein	B1GS76	Salmonella_phage	2.3e-08	51.2
WP_017900705.1\|193093_194167_+	hypothetical protein	A6N3G8	Burkholderia_virus	1.1e-18	56.8
WP_017900703.1\|194583_194991_+	hypothetical protein	H6WRY2	Salmonella_phage	3.5e-18	56.1
WP_017900702.1\|194987_195272_+	hypothetical protein	NA	NA	NA	NA
WP_014839971.1\|195761_195974_+	hypothetical protein	J9Q804	Salmonella_phage	3.0e-13	50.0
WP_017900701.1\|196230_196863_+	hypothetical protein	A0A1V0E5L6	Salmonella_phage	1.5e-28	55.9
WP_017900700.1\|196902_197424_+	DUF262 domain-containing protein	A0A2H4FWH2	Salmonella_phage	5.4e-64	68.5
WP_009654227.1\|197516_197804_+	hypothetical protein	NA	NA	NA	NA
WP_009654204.1\|198056_198377_+	hypothetical protein	NA	NA	NA	NA
WP_017900698.1\|198466_198901_+	hypothetical protein	A0A1I9KFG8	Aeromonas_phage	4.3e-06	28.3
WP_017900697.1\|198986_199619_+	hypothetical protein	K4JV11	Caulobacter_phage	8.3e-27	41.2
WP_025999285.1\|199900_200245_+	DUF957 domain-containing protein	NA	NA	NA	NA
WP_017900695.1\|200241_200487_+	hypothetical protein	NA	NA	NA	NA
WP_099501131.1\|200560_200950_+	hypothetical protein	NA	NA	NA	NA
WP_017900693.1\|201849_203091_+	hypothetical protein	A0A2P9HXK7	Yersinia_phage	8.7e-12	29.4

DBSCAN-SWA_4

212037 : 233146

Escherichia_phage(87.5%)

integrase,transposase

attL 207335:207349|attR 236374:236388

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
207335:207349	attL	NA	NA	NA	NA
WP_032447056.1\|212037_214248_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_001067855.1\|216925_217630_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_001067855.1\|220942_221647_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_014839978.1\|222146_222935_+	transcriptional regulator	NA	NA	NA	NA
WP_014839979.1\|222934_223453_+	hypothetical protein	NA	NA	NA	NA
WP_014839980.1\|223457_223874_-	fosfomycin resistance glutathione transferase FosA3	Q2LI91	Bacillus_phage	2.0e-08	35.6
WP_001067855.1\|224259_224964_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_014839981.1\|226597_227500_-	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	4.5e-159	99.3
WP_002210513.1\|227761_228523_+	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.9e-134	100.0
WP_002904004.1\|228543_229404_-	class A extended-spectrum beta-lactamase SHV-12	A0A077SL40	Escherichia_phage	2.2e-155	99.3
WP_001067855.1\|229540_230245_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000427619.1\|232141_233146_+\|transposase	IS110-like element IS5075 family transposase	NA	NA	NA	NA
236374:236388	attR	NA	NA	NA	NA

DBSCAN-SWA_5

237853 : 288802

uncultured_Caudovirales_phage(29.17%)

integrase,transposase

attL 245943:246002|attR 276033:276854

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001553819.1\|237853_240751_+\|transposase	Tn3-like element Tn5403 family transposase	A0A1B0V7H9	Salmonella_phage	4.2e-182	37.8
WP_001493762.1\|241591_242164_-	recombinase family protein	M9Q1K0	Clostridium_phage	3.4e-19	39.4
WP_012477564.1\|242300_242891_-	plasmid pRiA4b ORF-3 family protein	NA	NA	NA	NA
WP_014839983.1\|243325_243940_+	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	8.1e-35	47.4
WP_001516695.1\|244258_244915_-	quinolone resistance pentapeptide repeat protein QnrS1	NA	NA	NA	NA
245943:246002	attL	NA	NA	NA	NA
WP_001067855.1\|245994_246699_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_012477889.1\|247549_247846_-	HigA family addiction module antidote protein	NA	NA	NA	NA
WP_011191340.1\|248500_248749_+	type II toxin-antitoxin system YafQ family toxin	NA	NA	NA	NA
WP_003159185.1\|248877_249444_+	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	7.9e-45	54.3
WP_000845039.1\|249791_250805_-\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
WP_015060105.1\|250957_251698_+	subclass B1 metallo-beta-lactamase IMP-4	NA	NA	NA	NA
WP_048336621.1\|251787_253137_-	group II intron reverse transcriptase/maturase	H7BV81	unidentified_phage	3.3e-12	28.3
WP_000679427.1\|253809_254157_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
WP_000259031.1\|254150_254990_+	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
WP_000050481.1\|255394_256936_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_000359986.1\|257243_258017_+	ArmA family 16S rRNA (guanine(1405)-N(7))-methyltransferase	NA	NA	NA	NA
WP_077252464.1\|257997_258279_-	hypothetical protein	NA	NA	NA	NA
WP_002026779.1\|258498_258684_-	hypothetical protein	NA	NA	NA	NA
WP_002001451.1\|258732_259917_+\|transposase	IS4-like element ISEc29 family transposase	A0A0F7LAS3	uncultured_marine_virus	4.5e-50	35.4
WP_000052512.1\|260315_261791_+	ABC-F type ribosomal protection protein Msr(E)	A0A1B0RXA0	Streptococcus_phage	2.3e-160	59.0
WP_000155092.1\|261846_262731_+	Mph(E) family macrolide 2'-phosphotransferase	NA	NA	NA	NA
WP_004896925.1\|263089_263632_-	hypothetical protein	NA	NA	NA	NA
WP_001067858.1\|264516_265221_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6
WP_004118538.1\|265797_266130_+	multidrug efflux SMR transporter	NA	NA	NA	NA
WP_011977829.1\|266483_267632_-	Na+/H+ antiporter NhaA	A0A2H4J5W3	uncultured_Caudovirales_phage	1.7e-123	65.9
WP_004118534.1\|267906_268281_-	fluoride efflux transporter CrcB	A0A2H4J148	uncultured_Caudovirales_phage	4.5e-28	56.0
WP_001549953.1\|268809_270006_+	MFS transporter	NA	NA	NA	NA
WP_004118529.1\|270077_270905_-	universal stress protein	NA	NA	NA	NA
WP_001549885.1\|270923_272402_-	SulP family inorganic anion transporter	A0A2H4J153	uncultured_Caudovirales_phage	1.6e-198	74.0
WP_001549886.1\|272885_273239_+	metalloregulator ArsR/SmtB family transcription factor	A0A2H4J145	uncultured_Caudovirales_phage	5.9e-22	57.1
WP_001549887.1\|273334_274618_+	arsenic transporter	A0A2H4J144	uncultured_Caudovirales_phage	2.9e-175	74.6
WP_001549888.1\|274667_275096_+	arsenate reductase (glutaredoxin)	A0A2H4J8T1	uncultured_Caudovirales_phage	2.3e-52	70.7
WP_004118521.1\|275153_275876_-	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	1.5e-96	73.0
WP_001067855.1\|276084_276789_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_001239317.1\|276868_277369_+	hypothetical protein	NA	NA	NA	NA
276033:276854	attR	NA	NA	NA	NA
WP_001011939.1\|277518_278160_+	type A-2 chloramphenicol O-acetyltransferase CatII	G3CFL0	Escherichia_phage	7.3e-55	45.9
WP_008126957.1\|278966_281951_+\|transposase	Tn3-like element ISKox2 family transposase	A0A1B0V7H9	Salmonella_phage	8.8e-34	24.7
WP_001330846.1\|282736_282982_-	hypothetical protein	NA	NA	NA	NA
WP_000951934.1\|282987_283179_+	hypothetical protein	NA	NA	NA	NA
WP_000587837.1\|283660_284203_-	AAA family ATPase	NA	NA	NA	NA
WP_000557454.1\|284215_285076_-	aminoglycoside N-acetyltransferase AAC(3)-IId	NA	NA	NA	NA
WP_001339197.1\|285218_286427_+\|transposase	IS4-like element ISVsa5 family transposase	Q9E8P4	Bluetongue_virus	3.0e-235	100.0
WP_001352368.1\|286556_287765_+\|transposase	IS4-like element ISVsa5 family transposase	A0A0F7LAS3	uncultured_marine_virus	1.8e-235	100.0
WP_001389365.1\|288037_288802_+\|transposase	IS6-like element IS6100 family transposase	A0A077SL39	Escherichia_phage	4.3e-86	65.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

4. NZ_CP026016

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

88710 : 99460

Escherichia_phage(37.5%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_137963431.1\|88710_89358_-\|transposase	IS6 family transposase	A0A077SL39	Escherichia_phage	2.2e-35	41.5
WP_153242794.1\|89372_89597_+	hypothetical protein	NA	NA	NA	NA
WP_012539983.1\|90665_91421_+	replication initiation protein RepE	I3WF20	Macacine_betaherpesvirus	1.7e-135	95.2
WP_015632469.1\|92186_93392_+	ParA family protein	A0A077SL49	Escherichia_phage	4.0e-163	69.6
WP_137963433.1\|93388_94366_+	ParB/RepB/Spo0J family partition protein	A0A1B0V750	Salmonella_phage	1.1e-86	55.3
WP_153242796.1\|94447_95719_-	translesion error-prone DNA polymerase V subunit UmuC	F1C5A5	Cronobacter_phage	1.3e-148	63.2
WP_020805749.1\|95718_96150_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	3.6e-29	53.3
WP_072198233.1\|96383_97355_+	StbA family protein	A0A222YXF2	Escherichia_phage	8.2e-74	46.8
WP_060598826.1\|97357_98029_+	Mediator of plasmid stability	NA	NA	NA	NA
WP_048993627.1\|98092_98323_+	hypothetical protein	NA	NA	NA	NA
WP_137963434.1\|98758_99460_+	DNA methylase	A0A2I7RE86	Vibrio_phage	4.6e-26	36.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP026013

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP026015

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP026014

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

4. NZ_CP026016

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection