CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP045540	Proteus mirabilis strain CRE14IB plasmid pIB_NDM_1, complete sequence	0 crisprs	csa3	0	1
NZ_CP045538	Proteus mirabilis strain CRE14IB chromosome, complete genome	3 crisprs	c2c9_V-U4,cas3,DEDDh,DinG,PD-DExK,RT,csa3	2	11
NZ_CP045539	Proteus mirabilis strain CRE14IB plasmid pIB_COL3M, complete sequence	0 crisprs	NA	0	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1508 : 41197

Salmonella_phage(11.76%)

integrase,transposase

attL 27836:27852|attR 41938:41954

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001138073.1\|1508_4481_-\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	73.1
WP_001162012.1\|4483_5041_-	recombinase family protein	A0A1B0V7I5	Salmonella_phage	5.8e-48	81.3
WP_000845039.1\|5346_6360_-\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
WP_004201280.1\|6515_6989_+	trimethoprim-resistant dihydrofolate reductase DfrA14	G3MBI7	Bacillus_virus	8.4e-16	28.9
WP_000237816.1\|7099_7552_+	NAD(+)--rifampin ADP-ribosyltransferase Arr-2	NA	NA	NA	NA
WP_000846390.1\|7847_8648_+	oxacillin-hydrolyzing class D beta-lactamase OXA-10	NA	NA	NA	NA
WP_152964650.1\|8664_9456_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1	NA	NA	NA	NA
WP_000679427.1\|9619_9967_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
WP_000259031.1\|9960_10800_+	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
WP_000050481.1\|11204_12746_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_004993232.1\|13111_13564_+	hypothetical protein	NA	NA	NA	NA
WP_019768104.1\|13625_14108_-	hypothetical protein	NA	NA	NA	NA
WP_014386410.1\|15408_16188_+	APH(3')-VI family aminoglycoside O-phosphotransferase	E4ZFP6	Streptococcus_phage	6.9e-31	34.7
WP_004683689.1\|16354_17365_+\|transposase	IS30-like element ISAba125 family transposase	W5R8L2	Staphylococcus_phage	4.1e-52	38.4
WP_004201164.1\|17465_18278_+	subclass B1 metallo-beta-lactamase NDM-1	NA	NA	NA	NA
WP_000259031.1\|18566_19406_+	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
WP_000376623.1\|19533_20034_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_001339197.1\|21064_22273_+\|transposase	IS4-like element ISVsa5 family transposase	Q9E8P4	Bluetongue_virus	3.0e-235	100.0
WP_000428546.1\|22786_23380_+	tetracyline resistance-associated transcriptional repressor TetC	NA	NA	NA	NA
WP_001089072.1\|23492_24698_-	tetracycline efflux MFS transporter Tet(B)	NA	NA	NA	NA
WP_000088605.1\|24779_25403_+	tetracycline resistance transcriptional repressor TetR(B)	NA	NA	NA	NA
WP_110592899.1\|25380_26061_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_148099023.1\|25993_26419_+	hypothetical protein	NA	NA	NA	NA
WP_024008858.1\|26415_27240_+	patatin family protein	NA	NA	NA	NA
WP_094963231.1\|27298_28504_+	MFS transporter	NA	NA	NA	NA
27836:27852	attL	NA	NA	NA	NA
WP_024008860.1\|28859_30347_+	SulP family inorganic anion transporter	A0A2H4J153	uncultured_Caudovirales_phage	5.2e-213	77.3
WP_024008861.1\|30357_31209_+	universal stress protein	A0A2H4J154	uncultured_Caudovirales_phage	1.5e-50	37.1
WP_109910892.1\|31849_32860_+	translesion error-prone DNA polymerase V subunit UmuC	A0A1W6JNT0	Morganella_phage	9.9e-123	63.9
WP_072070749.1\|33211_34258_+	ParB/RepB/Spo0J family partition protein	D5LGX9	Escherichia_phage	1.0e-29	31.8
WP_023159966.1\|34260_34605_+	single-stranded DNA-binding protein	A0A291LA01	Bordetella_phage	3.6e-08	39.3
WP_048821775.1\|34597_35020_+	hypothetical protein	NA	NA	NA	NA
WP_109910891.1\|35029_35422_+	hypothetical protein	NA	NA	NA	NA
WP_109910890.1\|35771_36140_+	hypothetical protein	NA	NA	NA	NA
WP_096864993.1\|36237_36465_-	DNA partition complex ParG	NA	NA	NA	NA
WP_109910889.1\|36565_37189_-	AAA family ATPase	D4HTX7	Vibrio_phage	1.6e-22	35.4
WP_096864992.1\|37458_37704_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_023159957.1\|37703_38036_+	endoribonuclease MazF	A0A1S5SEX8	Streptococcus_phage	5.6e-06	32.4
WP_096864991.1\|38066_38447_+	hypothetical protein	NA	NA	NA	NA
WP_071547955.1\|38532_38676_-	type I toxin-antitoxin system Hok family toxin	NA	NA	NA	NA
WP_048607643.1\|39040_39838_-	hypothetical protein	NA	NA	NA	NA
WP_163939961.1\|40408_41197_+\|integrase	tyrosine-type recombinase/integrase	A0A1P8DJ76	Virus_Rctr85	6.3e-24	29.3
41938:41954	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP045538

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP045538_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045538_1

206997-207092

Orphan

Consensus_repeat	Method
ATAGCTTAGAAAAATAAGTACTAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP045538_1

>merge|NZ_CP045538|1|206997-207092|CRISPRCasFinder
ATAGCTTAGAAAAATAAGTACTAATATATTTTAAAAGATAAAACAGAATATAAGTTTATTATCTTGAAATAGATAGCTTAGAAAAATAAGTGCTAA

>NZ_CP045538|1|1|206997-207092|CRISPRCasFinder
ATAGCTTAGAAAAATAAGTACTAA	TATATTTTAAAAGATAAAACAGAATATAAGTTTATTATCTTGAAATAG
ATAGCTTAGAAAAATAAGTGCTAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045538.2\|WP_004246355.1\|212860_213187_+\|thioredoxin-TrxA	unknown	unknown	gnl\|CDD\|181812
NZ_CP045538.2\|WP_004246349.1\|217704_218835_+\|UDP-N-acetylglucosamine-2-epimerase-(non-hydrolyzing)	unknown	unknown	gnl\|CDD\|223458
NZ_CP045538.2\|WP_012368696.1\|205409_206885_+\|ketol-acid-reductoisomerase	unknown	unknown	gnl\|CDD\|235368
NZ_CP045538.2\|WP_004249676.1\|200935_202786_+\|dihydroxy-acid-dehydratase	unknown	unknown	gnl\|CDD\|237104
NZ_CP045538.2\|WP_049221746.1\|202789_204364_+\|threonine-ammonia-lyase,-biosynthetic	unknown	unknown	gnl\|CDD\|236417
NZ_CP045538.2\|WP_004253075.1\|207413_207662_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045538.2\|WP_152964440.1\|215401_216493_+\|UDP-N-acetylglucosamine--undecaprenyl-phosphate-N-acetylglucosaminephosphotransferase	unknown	unknown	gnl\|CDD\|237913
NZ_CP045538.2\|WP_017827031.1\|197770_197872_+\|ilv-operon-leader-peptide	unknown	unknown	gnl\|CDD\|170429
NZ_CP045538.2\|WP_004246367.1\|198001_199651_+\|acetolactate-synthase-2-catalytic-subunit	unknown	unknown	gnl\|CDD\|181601
NZ_CP045538.2\|WP_004249673.1\|207834_209856_+\|DNA-helicase-Rep	unknown	unknown	gnl\|CDD\|182838
NZ_CP045538.2\|WP_036920151.1\|195793_197326_-\|YifB-family-Mg-chelatase-like-AAA-ATPase	unknown	unknown	gnl\|CDD\|182120
NZ_CP045538.2\|WP_004246354.1\|213748_215008_+\|transcription-termination-factor-Rho	unknown	unknown	gnl\|CDD\|236490
NZ_CP045538.2\|WP_004246370.1\|195407_195746_+\|DUF413-domain-containing-protein	unknown	unknown	gnl\|CDD\|236825
NZ_CP045538.2\|WP_004249672.1\|211442_212741_-\|ATP-dependent-RNA-helicase-RhlB	unknown	unknown	gnl\|CDD\|235314
NZ_CP045538.2\|WP_004246365.1\|199936_200863_+\|branched-chain-amino-acid-transaminase	unknown	unknown	gnl\|CDD\|235841
NZ_CP045538.2\|WP_004246362.1\|204349_205237_-\|HTH-type-transcriptional-activator-IlvY	unknown	unknown	gnl\|CDD\|236961
NZ_CP045538.2\|WP_004246360.1\|207143_207413_-\|type-II-toxin-antitoxin-system-mRNA-interferase-toxin,-RelE/StbE-family	unknown	unknown	gnl\|CDD\|379750
NZ_CP045538.2\|WP_004246357.1\|209930_211439_-\|guanosine-5'-triphosphate,3'-diphosphate-diphosphatase	unknown	unknown	gnl\|CDD\|236826
NZ_CP045538.2\|WP_004246366.1\|199647_199926_+\|acetolactate-synthase-2-small-subunit	unknown	unknown	gnl\|CDD\|236862
NZ_CP045538.2\|WP_004249670.1\|216516_217575_+\|ECA-polysaccharide-chain-length-modulation-protein	unknown	unknown	gnl\|CDD\|236943

Protein	Function_ID	Function_description	E-value
NZ_CP045538.2\|WP_004246355.1\|212860_213187_+\|thioredoxin-TrxA	gnl\|CDD\|181812	PRK09381, trxA, thioredoxin TrxA.	1.85797e-62
NZ_CP045538.2\|WP_004246349.1\|217704_218835_+\|UDP-N-acetylglucosamine-2-epimerase-(non-hydrolyzing)	gnl\|CDD\|223458	COG0381, WecB, UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane].	0
NZ_CP045538.2\|WP_012368696.1\|205409_206885_+\|ketol-acid-reductoisomerase	gnl\|CDD\|235368	PRK05225, PRK05225, ketol-acid reductoisomerase; Validated.	0
NZ_CP045538.2\|WP_004249676.1\|200935_202786_+\|dihydroxy-acid-dehydratase	gnl\|CDD\|237104	PRK12448, PRK12448, dihydroxy-acid dehydratase; Provisional.	0
NZ_CP045538.2\|WP_049221746.1\|202789_204364_+\|threonine-ammonia-lyase,-biosynthetic	gnl\|CDD\|236417	PRK09224, PRK09224, threonine ammonia-lyase IlvA.	0
NZ_CP045538.2\|WP_152964440.1\|215401_216493_+\|UDP-N-acetylglucosamine--undecaprenyl-phosphate-N-acetylglucosaminephosphotransferase	gnl\|CDD\|237913	PRK15119, PRK15119, UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase.	0
NZ_CP045538.2\|WP_017827031.1\|197770_197872_+\|ilv-operon-leader-peptide	gnl\|CDD\|170429	PRK10424, PRK10424, ilv operon leader peptide.	0.00197669
NZ_CP045538.2\|WP_004246367.1\|198001_199651_+\|acetolactate-synthase-2-catalytic-subunit	gnl\|CDD\|181601	PRK08978, PRK08978, acetolactate synthase 2 catalytic subunit; Reviewed.	0
NZ_CP045538.2\|WP_004249673.1\|207834_209856_+\|DNA-helicase-Rep	gnl\|CDD\|182838	PRK10919, PRK10919, ATP-dependent DNA helicase Rep; Provisional.	0
NZ_CP045538.2\|WP_036920151.1\|195793_197326_-\|YifB-family-Mg-chelatase-like-AAA-ATPase	gnl\|CDD\|182120	PRK09862, PRK09862, ATP-dependent protease.	0
NZ_CP045538.2\|WP_004246354.1\|213748_215008_+\|transcription-termination-factor-Rho	gnl\|CDD\|236490	PRK09376, rho, transcription termination factor Rho; Provisional.	0
NZ_CP045538.2\|WP_004246370.1\|195407_195746_+\|DUF413-domain-containing-protein	gnl\|CDD\|236825	PRK11027, PRK11027, hypothetical protein; Provisional.	1.02914e-69
NZ_CP045538.2\|WP_004249672.1\|211442_212741_-\|ATP-dependent-RNA-helicase-RhlB	gnl\|CDD\|235314	PRK04837, PRK04837, ATP-dependent RNA helicase RhlB; Provisional.	0
NZ_CP045538.2\|WP_004246365.1\|199936_200863_+\|branched-chain-amino-acid-transaminase	gnl\|CDD\|235841	PRK06606, PRK06606, branched-chain amino acid transaminase.	0
NZ_CP045538.2\|WP_004246362.1\|204349_205237_-\|HTH-type-transcriptional-activator-IlvY	gnl\|CDD\|236961	PRK11716, PRK11716, HTH-type transcriptional activator IlvY.	0
NZ_CP045538.2\|WP_004246360.1\|207143_207413_-\|type-II-toxin-antitoxin-system-mRNA-interferase-toxin,-RelE/StbE-family	gnl\|CDD\|379750	pfam15738, YafQ_toxin, Bacterial toxin of type II toxin-antitoxin system, YafQ. YafQ is a family of bacterial toxin ribonucleases of type II toxin-antitoxin systems. The E.coli gene is expressed from the dinB operon. The cognate antitoxin for the E. coli protein is DinJ, in family RelB_antitoxin, pfam02604.	1.15858e-41
NZ_CP045538.2\|WP_004246357.1\|209930_211439_-\|guanosine-5'-triphosphate,3'-diphosphate-diphosphatase	gnl\|CDD\|236826	PRK11031, PRK11031, guanosine-5'-triphosphate,3'-diphosphate diphosphatase.	0
NZ_CP045538.2\|WP_004246366.1\|199647_199926_+\|acetolactate-synthase-2-small-subunit	gnl\|CDD\|236862	PRK11152, ilvM, acetolactate synthase 2 small subunit.	3.08752e-35
NZ_CP045538.2\|WP_004249670.1\|216516_217575_+\|ECA-polysaccharide-chain-length-modulation-protein	gnl\|CDD\|236943	PRK11638, PRK11638, ECA polysaccharide chain length modulation protein.	0

>NZ_CP045538.2|WP_012368696.1|205409_206885_+|ketol-acid-reductoisomerase
MANYFNTLNLRQQLSQLGKCRFMSRDEFADEANYLKGKKVVIVGCGAQGLNQGLNMRDSGLDIAYALRQEAIDEKRASWRRATENGFEVGTYEALIPQADLVVNLTPDKQHSAVVQAVQPLMKSGAALGYSHGFNIVEVGEKIRDDITVVMVAPKCPGTEVREEYKRGFGVPTLIAVHPENDAKGEGMAIAKAWAAATGGHRAGVLESSFVAEVKSDLMGEQTILCGMLQAGSLLCYDKMVAEGVEPGYAGKLIQFGWETITEALKQGGITLMMDRLSNPAKMRAYALSEQLKEIMAPLFAKHMDDIISGKFSETMMADWANDDKNLLTWREETGASAFENYPEYEGKISEQEYFDHGVLMVAMVKAGVELAFDTMIEAGIIAESAYYESLHELPLIANTIARKRLYEMNVVISDTAEYGNYLFSFAAVPMLKEFMTTLQSGDLAKHVPDSGTDNAQLRDINEAIRQHPIEIVGKKLRGYMTDMKKIAVAN
>NZ_CP045538.2|WP_004246362.1|204349_205237_-|HTH-type-transcriptional-activator-IlvY
MDIRDLKLFLHLAESCHFTKTAQAMHVSPSTLSRQIQRLEEQLGHPLFLRDNRQVTLTDAGEQLKRYAQHTLLQYKQLKHTLNQNSPSLSGELRLFCSVTAAYSHLPPILDRFRAENPLVEIKLTTGDAADAVDKVISDEADLGIAGKPEKLPENICFEKIGEIPLVLIAPALPGNVRHLATQEKPDWLNIPFIIPEHGPSRQRIALWFKRHRIQNPLIYATVSGHEAIVSMVALGCGIALIPQVVVDNCPEPVRNRISLLDNISLVEPFELGVCGLHKRLQEPVISAFWRLLHH
>NZ_CP045538.2|WP_049221746.1|202789_204364_+|threonine-ammonia-lyase,-biosynthetic
MAAFRPLTSAPSSAEYLKAALSAPVYEAAVVTPLQEMAKISQRLENTILVKREDRQPVHSFKLRGAYNMIAGLTPEQKAKGVVTASAGNHAQGVALSANRMGVKALIVMPIATADIKVDAVRQFGGEALLYGANFDEAKAKAIALAKEMGYTFVPPFDHPAVIAGQATLAMELLQQDVHLDRIFVPVGGGGLIAGVAVLIKQLMPEIKIIGVEAEDAACLKAALEAGHPVELPRVGLFAEGVAVKRIGDETFRLCQKYVDDVITVDSDAICAAVKDLFEDVRAIAEPSGALALAGLKKYVEEHQIKGERLAHVLSGANVNFHGLRYVSERCELGEKREALFAVTIPEQKGSFLRFCQILGQRIVTEFNYRYSDADPENARIFVGVRLSQGLQERKEIVQQLTEAGYQVSDLSDDEMAKLHVRYMVGGRPNQPLKERLFSFEFPEAPGALMKFLKTLGTYWNITLFHYRSHGTDYGRVLVAFELPETEGRFERHLDALGYEYHDETGNPSFQLFLSPQTASLVVE
>NZ_CP045538.2|WP_004249676.1|200935_202786_+|dihydroxy-acid-dehydratase
MPKYRSATTTHGRNMAGARALWRATGMTDADFGKPIIAVVNSFTQFVPGHVHLRDLGKLVAEQIEAAGGVAKEFNTIAVDDGIAMGHGGMLYSLPSRELIADSVEYMVNAHCADAMVCISNCDKITPGMLMASLRLNIPVIFVSGGPMEAGKTKLSDQLIKLDLVDAMIQGANPNVSDADSEQIERSACPTCGSCSGMFTANSMNCLTEALGLSQPGNGSLLATHADRKTLFINAGKRIVELTKRYYEQDDLSALPRNIAKKEAFENAMILDIAMGGSTNTVLHLLAAAQEGDVDFKMEDIDRLSRQVPHLCKVAPSTQKYHMEDVHRAGGVMGILGELDRAGLLNRNVNNILGLSLPETLAQYDVMLSQDEQVKSMYQAGPAGIRTTKAFSQDCRWPTLDTDREQGCIRSKAHAYSQDGGLAVLSGNLAQDGCIVKTAGVDEDNLVFSGPAKVYESQDDAVEAILGGKVVAGDVVIIRYEGPKGGPGMQEMLYPTSYLKSMGLGKACALITDGRFSGGTSGLSIGHVSPEAANGGIIGLVEEGDIVDINIPNREINLRVDEKTLAARREAQLARGDKAWTPKDRQRQVSFALRAYASLATSADKGAVRDKSKLGG
>NZ_CP045538.2|WP_004246365.1|199936_200863_+|branched-chain-amino-acid-transaminase
MTKQADYIWFNGEMVPWAEAKVHVMSHALHYGTSVFEGVRCYDSHKGPVVFRHREHMQRLHDSAKIYRMPVAQSVDELMEACRETLRKNQLVSAYIRPLVFIGDVGMGVNPPEGYKTDIIIAAFPWGAYLGEEALDKGIDAMVSSWHRAAPNTIPTAAKAGGNYLSSLLVGSEARRHGYQEGIALDVHGYLSEGAGENLFEVKDGVIFTPPFTSSALPGITRDAIIKLAKDLGYEIREQVLSRESLYLADEVFMSGTAAEITPVRSVDGIQVGIGRCGPVTKAIQKAFFGLFTGETEDKYGWLDPVNP
>NZ_CP045538.2|WP_004246366.1|199647_199926_+|acetolactate-synthase-2-small-subunit
MNQHNITIEARFCPEILERILRVIRHRGFHICSMNMNITESNYINLALTVSSQRPVDLLCSQLTKLADVAGIQVLHQQQKEKLQFISALSAM
>NZ_CP045538.2|WP_004246367.1|198001_199651_+|acetolactate-synthase-2-catalytic-subunit
MNGAQWLVQALRKQRVETVFGYPGGAIMPVYDALYDGGVEHVLCRHEQGAAIAAIGFARSTGTTGVCIATSGPGATNVITGLADALLDSVPVVAITGQVASNLIGTDAFQEVDVLGLSLACTKHSFLVSDVNELPRVVSEAFSIAKQGRPGPVLIDITKDVQLADASHLADYPLPQEQEFPYPEHEIAQALQMLAQAKKPILYVGGGVAMSQGVEALRSFVKQTQIPVVSTLKGLGCANAFDANYLGMLGMHGTKAANYAVQRSDLLIAVGARFDDRVTGRLNTFAPNAKVIHIDIDYAELNKLKQAHIALLGDAKVLLPKLSQPLAIEAWQEEVQQLIAEYAWRYDHPGEAIYAPLLLKQLSDAKPENSIVTTDVGQHQMWSAQHMTFDAPENFITSSGLGTMGFGIPAAIGAQIARPDACVICVSGDGSFMMNVQELGTIKRKQLPIKLVLLDNQRLGMVRQWQELFFEQRYSETILTDNPDFVALAKAFDIPGQRITEKAQVAEAIKCLLTSDGPYLLQVSIDDAENVWPLVPPGASNDEMMEKSK
>NZ_CP045538.2|WP_017827031.1|197770_197872_+|ilv-operon-leader-peptide
MNTIVLVISLIIVSVVVIINPLCGAALGRRKAN
>NZ_CP045538.2|WP_036920151.1|195793_197326_-|YifB-family-Mg-chelatase-like-AAA-ATPase
MALAVIYTRASLGISAPLITIEAHISQGLPGLTLVGLPETVVKEAKDRVRSALINSGYSYPAKRITINLSPADLPKEGARYDLPIALAILIASEQLISDKLNSYEFIGELALSGKLQKVNAVIPSILSANKDNRISIISIEHQSEVSLLPNKSALLASHLLDICHHLENNTPLIEAKNNINHKTIENQNNKDISDIIGQNNAKRAAEITAAGNHNILFLGPPGTGKTMLAQRINTLLPPLTAKEALDVLIISSLSNTIHHDGKWPLRPFRAPHHTASAVALTGGGSIPKPGEITLAHHGILFLDELPEFDRRVLDALREPLDARKITISRAKAKISYPANVLLVGALNPSPTGHYQGTHNRTPVKQVLRYLSKVSGPFLDRFDLSVEMPLLPQGALLQSTHTNESSSIIRARVLQARERQFQRSGKLNTYLSSKEIEHFCQLHTEDALFLEETLNKLGLSIRAWHKILRVSRTIADLENEQKIQRNHLIEALSFRAMDRLMIYLQKQLEG
>NZ_CP045538.2|WP_004246370.1|195407_195746_+|DUF413-domain-containing-protein
MAESFITTNRFFDNKHYPRGFSRHGDFTIKEAQILERHGQAFNELDLGKREPATEAEKLFVAMCRGEREAATVEEKIWKKYTSRISRPKRFHTLSGGKPQLDPSDDYTDSDD
>NZ_CP045538.2|WP_004246360.1|207143_207413_-|type-II-toxin-antitoxin-system-mRNA-interferase-toxin,-RelE/StbE-family
MRKVSYSGQFKKDLKLAEKRGKDINKLKEIILLLVQGKRLPAQLKDHPLTGNWKPRRDLHIEPDWLLIYKIDNDTVHFDRTGSHSDLFK
>NZ_CP045538.2|WP_004253075.1|207413_207662_-|hypothetical-protein
MSIKSELIATKVDIELKEAFVAIARNKHRPASQILRDLIRVYVESNQTQPNEKTLNTFAKTDKGDDVFYAEDAHDLFKKLDI
>NZ_CP045538.2|WP_004249673.1|207834_209856_+|DNA-helicase-Rep
MRLNPGQQKAVEYVSGPCLVLAGAGSGKTRVITNKIAYLIRQCRYSAKQIAAVTFTNKAAREMKERVAQTLGKQEAKGLMISTFHTLGLEIIKREYKALGIKSNFSLFDDQDQSALLKELTVDLLEEDKDLLSQLKSQISNWKNDMLTPEQVIGRAQSQQDHTFAECFRRYEQHLLSCNVLDFDDLISKPTLLLRTNEEVRARWQQRIRYLLVDEYQDTNTSQYELVKWLVGERARFTVVGDDDQSIYSWRGARPQNLVLLQKDFPQLNVIKLEQNYRSSGRILKSANILIENNPHVFEKRLFSELGYGDELRVLTANNEEHEAERVAGELIAHHFINKTNYKDYAILYRGNHQSRIFEKYLMQNRIPYRISGETSFFSREEIKDILAYLRVITNPDDDAAFLRIVNKPRREIGPMTIQKLGEWAKVRDKSLFNACFDLGLSQTLTGRGLSALQAFSQWMARIVQQSEREPLLAVRDLLHEMDYESWLYETSSSAKAAEMRMKNINQLFSWMSEMLEGDELHEPMTLSQVVNRFTLRDMMERGETDEELDQVQLMTLHASKGLEFPHVFLVGMEEGILPHQSSIDEDNVEEERRLAYVGITRAQKTLTFTLCKERRQYGELIRPEPSRFLYELPQDDLHWDTNKKKVLSAQEKQEKGQKGVAGLKAMLARHKP
>NZ_CP045538.2|WP_004246357.1|209930_211439_-|guanosine-5'-triphosphate,3'-diphosphate-diphosphatase
MLKSSSLYAAIDLGSNSFHMLVVREIAGSIQVLSRVKRKVRLAAGLNKENELSEQAMERGWQCLRLFSEYLRDIPAEQIRVVATATLRIAKNADIFVAKASEILGNTVHVISGEEEARLIYRGVAHTTGGAEQRLVVDIGGGSTELVTGTGAKTTQLMSLSMGCVTWLERYFSDRSLTEENFAQAQQAAKAILAPVAEKLIQQGWQVCVGASGTVQALQEIMIAQGMDELITLPKLERLKQKAIECGKLEELEIEGLTFERALVFPSGLAILIAIFETLHIENMILAGGALREGLVYGMLHLPIEQDIRQRTLRNIQRRFQIDIEQAHRVQQLAEHFFIQVSKSWQLDNRCRELLSSACALHEIGLSVDFRQAPSHASYLVSHLDLPGYTPAQRRLIASFLRNQKGIIDLAPLNQQNALPINQAYRLVRLLRLAIIFASRRRDDTLPALRLRTEDEKLIITLPHQWIAEHPLRAENLHEEIQLQSYVHWPLMLEEQNNSRIG
>NZ_CP045538.2|WP_004249672.1|211442_212741_-|ATP-dependent-RNA-helicase-RhlB
MSKTYLTEKKFSDFALHPKVIEALEKKGFSNCTQIQALTLPITVKGHDIAGQAQTGTGKTLAFLTSTFHYLLTHPAKEGHEKNQPRALIMAPTRELAVQIYTDAQPLAQSTGIKMGLAYGGDGYDEQLKVLNNGVDIVIGTTGRLIDYVKQGHINLNAIQVVVLDEADRMYDLGFIKDIRWLFRRMPNAAERMNMLFSATLSYRVRELAFEQMNNPEYVEVEPEQKTGFSIKEELFYPSNEEKMRLLQTLIEEEWPERCIIFANTKHRCDDIWAHLAADGHRVGLLTGDVPQKKRLRILEDFTQGNIDILVATDVAARGLHIPSVTHVFNYDLPDDCEDYVHRIGRTGRAGKSGNSISLACEEYALNLPAIETYIQHAIPVSKYNSDALLTDLPEPKRRHRPRQGQPRRNNSAPRRGNNTQRNNRNKRPSHS
>NZ_CP045538.2|WP_004246355.1|212860_213187_+|thioredoxin-TrxA
MSDKILHLSDNTFDVDVLQATGPVLVDFWAEWCGPCKMIAPILDEVATEYAGKLTVAKLNIDENPATAPKYGIRGIPTLILFKNGAVAATKVGALSKTQLKEFLDENI
>NZ_CP045538.2|WP_004246354.1|213748_215008_+|transcription-termination-factor-Rho
MNLTELKNTPVSELIALGENMGLENLARMRKQDIIFSILKQHAKSGEDIFGDGVLEILQDGFGFLRSSDSSYLAGPDDIYVSPSQIRRFNLRTGDTIAGKIRPPKEGERYFALLKVNEVNFDKPENARSKILFENLTPLHANNRLRMERGNGSTEDLTARVLDLAAPIGRGQRGLIVAPPKAGKTMLLQNIAANIAHNYPDCVLMVLLIDERPEEVTEMQRLVKGEVIASTFDEPASRHVQVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPSSGKVLTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDYNRSGTRKEELLTSQDELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNEEFFDFMKRS
>NZ_CP045538.2|WP_152964440.1|215401_216493_+|UDP-N-acetylglucosamine--undecaprenyl-phosphate-N-acetylglucosaminephosphotransferase
MDILKMSTNVFYVFLFSFAFLFVARKVAKKIGLVDKPNYRKRHHGLIPLVGGISVYFGIVFAFYVSDIYIPHKELYLICAGILVFIGALDDRYDISVKIRATIQALVGIAMMVFGGLKLESLGHAFGPWDIHLGPFGYIVTLFAVWAAINAFNMVDGIDGLLGGLSCVSFGALGILLYQSGSSALAFWCFSFIAAILPYIMLNLGVCGKKFKVFMGDAGSTLIGFTIIWLLISSTQVDPHPINAVTALWIIAIPLMDMVAIMYRRLRKGMSPFSPDRQHIHHLIMRAGFTPRQAFVLITLAAAVLAAIGIIGENLSFVPEWVMLALFLLAFVMYGYCIKRAWRVARFIKRYKRRLRKATQLKH
>NZ_CP045538.2|WP_004249670.1|216516_217575_+|ECA-polysaccharide-chain-length-modulation-protein
MNSENNVSRQGFSPDNELDIRGLCCALWSGKRWIIGFALLFALIALGASYLMQPKWSAIAMTERPTVNNLGSYYSQSQFLRNLDTQINPSVTVSQLSIPDEAYQEFVTQISAFDTRREFWLQTDYYKQRKENDAQADAALLDELINNIQFTPADEKKLVNDQLKLIAETANDSSQLLNEYIAFANKRAAEHLNEEVIAAWATRTQSMKALVKRQEMAAQAAYQRQINLLKQSIKVAEKQGISQKQTSIAIDELPDSKLFLLGVPLLQSQLETLMATGPDFDSDYDQNTAMLSTLAVGAKLQDNFQTYRFLRTPEDPVKRDSPRRAFMMVLWGAIGVLVGAGVALVRRSSLKK
>NZ_CP045538.2|WP_004246349.1|217704_218835_+|UDP-N-acetylglucosamine-2-epimerase-(non-hydrolyzing)
MKVLTVFGTRPEAIKMAPLVHALANDDSFEAKVCVTAQHREMLDQVLNLFEIKPDYDLNIMKPGQDLTDITCRILEGLKPVLASFQPDVVLVHGDTTTTMAASLAAFYQQIPVGHVEAGLRTGNLYSPWPEEANRTIAGHLAMYHFAPTETAKLNLVREAVADKNIFVTGNTVIDALFWVSERVMGNQTLLDELAVQYPFIQPERKMILVTGHRRESFGGGFERICQALAEIALAHPDVEVVYPVHLNPNVSEPVKRILHGINNIKLIQPQDYLPFVYLMNHAYLILTDSGGIQEEAPSLGKPVLVMRDTTERPEAVEAGSVRLVGTDTKRIVSEVTSLLTDENAYHQMSKATNPYGDGHACQRILEALKNNQVTL

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Crispr_ID: NZ_CP045538_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045538_2

2834729-2834871

Orphan

Consensus_repeat	Method
GGTGATATCAATTTCACAGGTGG	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP045538_2

>merge|NZ_CP045538|2|2834729-2834871|CRISPRCasFinder
GGTGATATCAATTTCACAGGTGGTGGCGCTGGTAATGTCATTAAATCTGATGTTACACAAGGTGATATCAATTTTACAGGTGGCGGCATAGCAAATGTAATAAAACATAACTCTAATTATGGTAATACCAACTTTACTGGTGG

>NZ_CP045538|2|2|2834729-2834871|CRISPRCasFinder
GGTGATATCAATTTCACAGGTGG	TGGCGCTGGTAATGTCATTAAATCTGATGTTACACAA
GGTGATATCAATTTTACAGGTGG	CGGCATAGCAAATGTAATAAAACATAACTCTAATTAT
GGTAATACCAACTTTACTGGTGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045538.2\|WP_004244080.1\|2850818_2853485_-\|pyruvate-dehydrogenase-(acetyl-transferring),-homodimeric-type	unknown	unknown	gnl\|CDD\|236500
NZ_CP045538.2\|WP_036905140.1\|2827108_2827732_-\|arginine-exporter-ArgO	unknown	unknown	gnl\|CDD\|236463
NZ_CP045538.2\|WP_004248539.1\|2827900_2828761_-\|small-conductance-mechanosensitive-channel-MscS	unknown	unknown	gnl\|CDD\|182386
NZ_CP045538.2\|WP_112842927.1\|2824360_2825344_-\|nucleotidyl-transferase-AbiEii/AbiGii-toxin-family-protein	unknown	unknown	gnl\|CDD\|378065
NZ_CP045538.2\|WP_049220920.1\|2829394_2831992_-\|bifunctional-aconitate-hydratase-2/2-methylisocitrate-dehydratase	unknown	unknown	gnl\|CDD\|236424
NZ_CP045538.2\|WP_060555640.1\|2858617_2859232_+\|dephospho-CoA-kinase	unknown	unknown	gnl\|CDD\|234620
NZ_CP045538.2\|WP_112842925.1\|2848949_2850806_-\|pyruvate-dehydrogenase-complex-dihydrolipoyllysine-residue-acetyltransferase	unknown	unknown	gnl\|CDD\|236999
NZ_CP045538.2\|WP_004248538.1\|2826283_2827018_-\|oxidative-stress-defense-protein	unknown	unknown	gnl\|CDD\|236840
NZ_CP045538.2\|WP_004244077.1\|2847320_2848748_-\|dihydrolipoyl-dehydrogenase	unknown	unknown	gnl\|CDD\|180579
NZ_CP045538.2\|WP_049197544.1\|2853648_2854419_-\|pyruvate-dehydrogenase-complex-transcriptional-repressor-PdhR	unknown	unknown	gnl\|CDD\|181879
NZ_CP045538.2\|WP_112842923.1\|2857140_2858340_+\|transporter	unknown	unknown	gnl\|CDD\|182559
NZ_CP045538.2\|WP_049220917.1\|2825340_2826060_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045538.2\|WP_004244066.1\|2828852_2829224_-\|YacL-family-protein	unknown	unknown	gnl\|CDD\|235372
NZ_CP045538.2\|WP_004250354.1\|2859234_2859987_+\|cell-division-protein-ZapD	unknown	unknown	gnl\|CDD\|235389
NZ_CP045538.2\|WP_162837617.1\|2832665_2832812_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045538.2\|WP_004244059.1\|2823272_2824172_+\|LysR-family-transcriptional-regulator-ArgP	unknown	unknown	gnl\|CDD\|235144
NZ_CP045538.2\|WP_036971246.1\|2855498_2855942_+\|prepilin-peptidase-dependent-pilin	unknown	unknown	gnl\|CDD\|236718
NZ_CP045538.2\|WP_112842924.1\|2856040_2857144_+\|Flp-pilus-assembly-complex-ATPase-component-TadA	unknown	unknown	gnl\|CDD\|236694
NZ_CP045538.2\|WP_046334654.1\|2832812_2833040_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045538.2\|WP_049197516.1\|2854745_2855288_-\|1,6-anhydro-N-acetylmuramyl-L-alanine-amidase-AmpD	unknown	unknown	gnl\|CDD\|236984

Protein	Function_ID	Function_description	E-value
NZ_CP045538.2\|WP_112842925.1\|2848949_2850806_-\|pyruvate-dehydrogenase-complex-dihydrolipoyllysine-residue-acetyltransferase	gnl\|CDD\|236999	PRK11854, aceF, pyruvate dehydrogenase dihydrolipoyltransacetylase; Validated.	0
NZ_CP045538.2\|WP_036905140.1\|2827108_2827732_-\|arginine-exporter-ArgO	gnl\|CDD\|236463	PRK09304, PRK09304, arginine exporter ArgO.	4.13688e-119
NZ_CP045538.2\|WP_004248539.1\|2827900_2828761_-\|small-conductance-mechanosensitive-channel-MscS	gnl\|CDD\|182386	PRK10334, PRK10334, small-conductance mechanosensitive channel MscS.	6.51737e-120
NZ_CP045538.2\|WP_112842927.1\|2824360_2825344_-\|nucleotidyl-transferase-AbiEii/AbiGii-toxin-family-protein	gnl\|CDD\|378065	pfam08843, AbiEii, Nucleotidyl transferase AbiEii toxin, Type IV TA system. This family was recently identified as belonging to the nucleotidyltransferase superfamily. AbiEii is the cognate toxin of the type IV toxin-antitoxin 'innate immunity' bacterial abortive infection (Abi) system that protects bacteria from the spread of a phage infection. The Abi system is activated upon infection with phage to abort the cell thus preventing the spread of phage through viral replication. There are some 20 or more Abis, and they are predominantly plasmid-encoded lactococcal systems. TA, toxin-antitoxin, systems on plasmids function by killing cells that lose the plasmid upon division. AbiE phage resistance systems function as novel Type IV TAs and are widespread in bacteria and archaea. The cognate antitoxin is pfam13338.	4.05985e-25
NZ_CP045538.2\|WP_049220920.1\|2829394_2831992_-\|bifunctional-aconitate-hydratase-2/2-methylisocitrate-dehydratase	gnl\|CDD\|236424	PRK09238, PRK09238, bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Validated.	0
NZ_CP045538.2\|WP_004250354.1\|2859234_2859987_+\|cell-division-protein-ZapD	gnl\|CDD\|235389	PRK05287, PRK05287, cell division protein ZapD.	1.19728e-117
NZ_CP045538.2\|WP_004244080.1\|2850818_2853485_-\|pyruvate-dehydrogenase-(acetyl-transferring),-homodimeric-type	gnl\|CDD\|236500	PRK09405, aceE, pyruvate dehydrogenase subunit E1; Reviewed.	0
NZ_CP045538.2\|WP_004248538.1\|2826283_2827018_-\|oxidative-stress-defense-protein	gnl\|CDD\|236840	PRK11087, PRK11087, oxidative stress defense protein; Provisional.	6.92322e-114
NZ_CP045538.2\|WP_004244077.1\|2847320_2848748_-\|dihydrolipoyl-dehydrogenase	gnl\|CDD\|180579	PRK06467, PRK06467, dihydrolipoamide dehydrogenase; Reviewed.	0
NZ_CP045538.2\|WP_049197544.1\|2853648_2854419_-\|pyruvate-dehydrogenase-complex-transcriptional-repressor-PdhR	gnl\|CDD\|181879	PRK09464, pdhR, pyruvate dehydrogenase complex transcriptional repressor PdhR.	4.16991e-168
NZ_CP045538.2\|WP_112842923.1\|2857140_2858340_+\|transporter	gnl\|CDD\|182559	PRK10573, PRK10573, protein transport protein HofC.	6.51728e-108
NZ_CP045538.2\|WP_060555640.1\|2858617_2859232_+\|dephospho-CoA-kinase	gnl\|CDD\|234620	PRK00081, coaE, dephospho-CoA kinase; Reviewed.	7.63102e-90
NZ_CP045538.2\|WP_004244066.1\|2828852_2829224_-\|YacL-family-protein	gnl\|CDD\|235372	PRK05248, PRK05248, hypothetical protein; Provisional.	9.00597e-61
NZ_CP045538.2\|WP_004244059.1\|2823272_2824172_+\|LysR-family-transcriptional-regulator-ArgP	gnl\|CDD\|235144	PRK03635, PRK03635, ArgP/LysG family DNA-binding transcriptional regulator.	1.29397e-161
NZ_CP045538.2\|WP_036971246.1\|2855498_2855942_+\|prepilin-peptidase-dependent-pilin	gnl\|CDD\|236718	PRK10574, PRK10574, putative major pilin subunit; Provisional.	5.06138e-55
NZ_CP045538.2\|WP_112842924.1\|2856040_2857144_+\|Flp-pilus-assembly-complex-ATPase-component-TadA	gnl\|CDD\|236694	PRK10436, PRK10436, hypothetical protein; Provisional.	2.02199e-179
NZ_CP045538.2\|WP_049197516.1\|2854745_2855288_-\|1,6-anhydro-N-acetylmuramyl-L-alanine-amidase-AmpD	gnl\|CDD\|236984	PRK11789, PRK11789, 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD.	1.83996e-131

>NZ_CP045538.2|WP_046334654.1|2832812_2833040_+|hypothetical-protein
MNHIPASGFIYMASIIKSMLENPCINKEFEKLIAADLLPILQNKTNMTENFTALHLIKKTSNRRIILKKNLFIIN
>NZ_CP045538.2|WP_162837617.1|2832665_2832812_+|hypothetical-protein
MAINEKFVQKTSSINYNNGIFSLYFVGQDPHKIAQGIMPEKDEELALK
>NZ_CP045538.2|WP_049220920.1|2829394_2831992_-|bifunctional-aconitate-hydratase-2/2-methylisocitrate-dehydratase
MLEEYRKHVAERAAEGVVPKPLDATQTAALVELLKSPPKGEEEFLLDLIVNRVPPGVDEAAYVKAGFLTALAKDETTSPLITPEKAVELLGTMQGGYNIHALIEALDNDKLAPIAAKALSHTLLMFDSFYDVEEKAKAGNVYAKQIMQSWADGEWFTERPELAEKITVTVFKVTGETNTDDLSPAPDAWSRPDIPLHALAMLKNAREGIEPDQPGSVGPIKQIEALNKKGFPLAYVGDVVGTGSSRKSATNSVLWFMGDDIPYVPNKRGGGVVLGGKIAPIFFNTMEDAGALPIEVDVSKLNMGDVIDIYPYKGEIRNHETNELLETFALKTEVLIDEVRAGGRIPLIIGRGLTSKARSALGLPPSTLFRHAKAVEQSDRGFSLAQKMVGRACGRDGIRPGEYCEPKMTSVGSQDTTGPMTRDELKDLACLGFSADLVMQSFCHTAAYPKPVDVTTHHTLPDFIMNRGGVSLRPGDGIIHSWLNRMLLPDTVGTGGDSHTRFPIGISFPAGSGLVAFAAATGVMPLDMPESVLVRFKGKMQPGVTLRDLVHAIPLYAIKEGLLTVEKKGKKNIFSGRILEIEGLPELKVEQAFELADASAERSAAGCTIKLDKAPIIEYLQSNIVLLKWMIAEGYGDRRTLERRITAMENWLADPQLLEADADAEYAAVIEIDLNEIKEPILCAPNDPDDARLLSEVANSKIDEVFIGSCMTNIGHFRAAGKLLDQHKGQLPTRLWVAPPTKMDAAQLTEEGYYSVFGKSGARIEVPGCSLCMGNQARVADGATVVSTSTRNFPNRLGTGANVYLASAELAAVASLLGRLPEPQEYLDFINKVDETAEDTYRYLNFDQLEQYTDKATQVIFQTTV
>NZ_CP045538.2|WP_004244066.1|2828852_2829224_-|YacL-family-protein
MDYEFQRDLTGGILARFSMDHEAIGYWLNDEIQGDISLIDQILTEMDEVKGSEKQWQLIGKEYSLSIDDEEIMVRANTLHFETDDLEEGMSYYDNESIAFCGLDDFATMLQKYRLFILENRRS
>NZ_CP045538.2|WP_004248539.1|2827900_2828761_-|small-conductance-mechanosensitive-channel-MscS
MNELPASLDEATGWFVANQELFIQYAVNIVAAFLILFIGLFVAKMVSKGVARILTLRHIDATVVTFLSVLVRYTVIAFTLIAVLGRLGVQTASVIAVLGAAGLAVGLALQGSLSNFAAGVLIVIFRPIRAGEYVMIGAVEGTVRDVQIFSTTLRSADDRIIVIPNSKIISSEVINLSREPNRRTQIIVGVAYDADIDKVKKVLGDVVAQDKRIQHNQGVTIRLHEMAPSSLNFVVRVWTTNDDAWPVYWDLMENFKRALDANNIGIPFPQMDVYMHQAQNTVMKAE
>NZ_CP045538.2|WP_036905140.1|2827108_2827732_-|arginine-exporter-ArgO
MLTTFFQGFLLSAAMILPIGAQNAFVLQQGSKKQYHLMSAFLCALSDVILISGGVFGGSALLSQSEYLLLLITWGGVAFLLWYGWNAFKTAFTKEIELSQHKNQVKSRWRVIVTLVAVTWLNPHVYLDTFVVLGSIGGQLSAELRPWFTFGAVFASISWFFALSLLAAWFSPILSQMTAQRIINLFVGCVMWFIALQLAAQGWKNLF
>NZ_CP045538.2|WP_004248538.1|2826283_2827018_-|oxidative-stress-defense-protein
MKVKAMVLASMLALGAPSIALAGAVPEGPHITTSGNATIKATPDMATLNIQVSEKAKDAAQAKKQVDERVAKYFAFLKENGVTKEDIDAANIRTQPNYEYDKKAERSVINGYTATRTVDVKIKKLDQLNTLLDGALAAGLNEINNVEFGVNDPEQYKAKAREVAIKNAIQQASSVAKGFGADLGAVYSVSYRAPEATPYPIARMKMDAMALSAPSPEAVKETYQQQSIEFKDYVDVVFELKTAK
>NZ_CP045538.2|WP_049220917.1|2825340_2826060_-|hypothetical-protein
MKIKPLVEKEINRFEFGKIFTYRDLTPYLSNPETTVKAVSRLVKNGDIKRFAKGQFYRPKKGIFGEMQLSDTEKLKTFMYQNGKRKGYITGMGLYNRLGLTTQIPKTITIASDKSPQRKDLGTVEVKLVKAKVPVSESNREYLEILDVLSNIKKIPDSNPSEVMKVIAKKLKNIKKDGLYELINLASFYSPVTRALLGLLIENININLALELKKQLNPTTHYRIGLDSYWDNAEEWNIE
>NZ_CP045538.2|WP_112842927.1|2824360_2825344_-|nucleotidyl-transferase-AbiEii/AbiGii-toxin-family-protein
MNLHNNPDVFLELINRTAEYFKIPEVYVEKDYWVTHVLLQLSLSEFRNDFIFKGGTALSKVFGLIKRFSEDVDLAMFNNRGLSSNQIKKCMKAAEETIAAGLTYIQKPDESKGSQFRKVYYKFPRIVSGEFGHASDVILLETNSFTSPEPFSFMPTESLIAEFIKKAQIEGGNEIITRYGLEKFEVNVLDIKRTVAEKILGLVRASSEADPKQALADKIRHIYDLCMIKRNKHYSQFFDSDSLWKMMDIVIQADRDQFREAGQWLDLYIRVCFSPSLVKYGKVSGGFFTANFLNWFMTVIFPLMMKFSAYFPQWPVFCKNGLINKLW
>NZ_CP045538.2|WP_004244059.1|2823272_2824172_+|LysR-family-transcriptional-regulator-ArgP
MKRPDYRALQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENLFGQPLLVRTVPPQPTEQGQKLLALLHQVEMLEEQWLGDENSGSTPLLLSLAVNADSLATWLLPALHPVLTQLPIRLNIQVEDETRTQERLRRGEVVGAISIQPQALPSCLVDQLGALDYLFVASPDFAQRYFANGVTKSSLLKAPAVAFDHLDDMHQAFLQQNFGLSPGSVPCHIVNSSEAFVQLAKQGSTCCMIPHLQIADELKSGELIDLTPGLCQRRMLYWHRFAPESRTMRKVTDALLDYGRKVLKQDEE
>NZ_CP045538.2|WP_004244077.1|2847320_2848748_-|dihydrolipoyl-dehydrogenase
MSTEIKAQVVVLGAGPAGYSAAFRCADLGLDTVLVERHSTLGGVCLNVGCIPSKALLHVAKVIEEAKALSEHGVVFDAPKTDIDKIRIWKDKVISQLTGGLAGMAKGRKVNVVNGEARFTGSHTLSVEGSEGTTTITFENAIVAAGSRPIELPFIPHEDPRVWDSTDALQLKTVPERLLVMGGGIIGLEMGTVYHALGSQIDVVEMFDQVIPAADKDVVKVFTKRISKKFNLMLETKVTAVEAKEDGIYVTMEGKKAPAEPQRYDAVLVAIGRVPNGKLLDAGKAGIEVDDRGFIHVDKQMRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEVISGKKHYFDPKVIPSIAYTEPEVAWVGMTEKEAKEKGVSYEVATFPWAASGRAIASDCADGMTKLIFDKETNRVIGGAIVGSNGGELLGEIGLAIEMGCDAEDIALTIHAHPTLYESIGMAAEVFEGSITDLPNPKAKKKK
>NZ_CP045538.2|WP_112842925.1|2848949_2850806_-|pyruvate-dehydrogenase-complex-dihydrolipoyllysine-residue-acetyltransferase
MSIEIKVPDIGADEVEVTEVMVKVGDRIEEEQSLITVEGDKASMEVPSPQAGIVKEIKIAVGDKVETGSLIMIFDTEEGAQAPAQEAAPAPSAAAPAASELKEVHVPDIGGDEVEVTEVMVNVGDTISEEQSLITVEGDKASMEVPAPFAGVVKEIKIAVGDKVSTGSLIMVFEVAGSAPAPSASAPAPAASAPAASAIKDVNVPDIGGDEVEVTEVMVKVGDTIAEEQSLITVEGDKASMEVPAPFAGVVKEIKIAVGDKVKTGSLIMTFEVAGAAPAAPAASTSAAPAPSAPAKAPASAPAAKEEFVENEAYVHATPVIRRLAREFGVNLAKVKGTGRKGRILREDVQSYVKELIKRAESAPANAGGGLPGMLPWPKVDFSKFGEIEEVELSRIQKISGANLSRNWVMIPHVNLFDEADITEVEEFRKQQNKEAEKKKLDVKITPLVFVMKAAAKALADMPRFNSSISEDGQKLILKKYINIGIAVDTPNGLVVPVFKDVNKKGILELSYELAEVSKKARAGKLTASDMQGGCFTISSLGGIGTTGFAPIVNAPEVAIMGLSRSSMKPVWNGKEFVPRLMLPMSLSFDHRVIDGADGARFITLINQYMSDLRRLVM
>NZ_CP045538.2|WP_004244080.1|2850818_2853485_-|pyruvate-dehydrogenase-(acetyl-transferring),-homodimeric-type
MSDMLKNDVDPIETRDWLQAIDSVIREEGVERAQFLIDQVLKQARNGGLDIALGGSVHSDYINTIPVEDEPAYPGNLELERRIRSAIRWNAVMMVLRASKKDLELGGHMASYQSSATLYEVCFNHFFRAHNDNDGGDLVYFQGHISPGIYARAFLEGRLTEEQLNNFRQEIGGKGLSSYPHPKLMPEFWQFPTVSMGLGPLSAIYQAKFLKYLDHRGLKDTTKQRVYAFLGDGEMDEPESKGAITIAVREKLDNLCFVVNCNLQRLDGPVTGNGKIVNELEGIFAGAGWNVIKVMWGDRWDALLRKDTSGKLIQLMNETLDGDYQTFKSRDGAYVREHFFNRYPETAALVKDMTDDEIWALNRGGHDPKKVFAAFQKAKETKDKPTVILAQTIKGYGMGETAEGKNIAHQVKKMNMDGVKHFRDRFNIPVSDEKVAELPYITFDKDSEEYKYLHARRQELEGYLPARRTRFDEKLEIPTLEDFSQLLEEQSKEISTTIAFVRALNVMLKNKSIKDRLVPIIADEARTFGMEGLFRQIGIYSPNGQQYTPQDREQVAYYKEDVKGQILQEGINELGAGASWLAAATSYSTNNLPMIPFYIYYSMFGFQRIGDLCWAAGDQQARGFLIGGTSGRTTLNGEGLQHEDGHSHIQSLTIPNCISYDPAFAYEVAVIMQDGLERMYGDKQENVYYYITTLNENYHMPAMPAGAEEGIRKGIYKLESLEGAKGKVQLLGSGSILRHVREAAQILSTEYGIGSDVYSVTSFTELARDGQDCERWNMLHPSEEPRVPYIAQIMNDAPAVASTDYMKLFAEQVRTYVPADDYRVLGTDGFGRSDSRENLRHHFEVDTSYVIVAALGELAKRGEIDVKVVEEAIKKYNINPEKVNPRLA
>NZ_CP045538.2|WP_049197544.1|2853648_2854419_-|pyruvate-dehydrogenase-complex-transcriptional-repressor-PdhR
MAYTKIRQPKLSDVIEQQLEHLILEGTLRPGEKLLPERELAKQFDVSRPSLREAIQKLEAKGFLLRRQGGGTFVQDNLWQSFSDPLAQLLSGHPESQFDLLETRHALEGIAAYYAALRGTDDDLERIKASHARIIDAHDKGDIAAESDAVLQYQLIVTEAAHNVVLLHLLRCMVPMLEQNIRQNFEFLYTRKEMLTAVSEHRTQIYQAIINREPEVAREASHRHLAFIEDVLLDMSREHTRRERSLRRLQQHPDLF
>NZ_CP045538.2|WP_049197516.1|2854745_2855288_-|1,6-anhydro-N-acetylmuramyl-L-alanine-amidase-AmpD
MEIKQGWLTGVKHVPSPNYDNRPEGEIPSLLIIHNISLPPGQFGGPYIDQLFTNTLAVDDHPFFNEIAHLRVSAHCLIRRDGEIVQYVPFTARAWHAGVSFYKGREKCNDFSIGIELEGTDECDFTSQQYQQLSTLTQQLIEHYPGIKENITGHSDVAPGRKTDPGPHFNWSYYRALLAK
>NZ_CP045538.2|WP_036971246.1|2855498_2855942_+|prepilin-peptidase-dependent-pilin
MNTLNYHSTENGFTLMELMIVIAIISILSSVAIPAYHGYIQKAALTDVLQTLSPYRSAVELCHYEHQYNQCHADASFMPQQFRSRYLTDIHVANGVISAKGKAQLEGLTIVMTPATNSKETLPQWQINCTSTNTALQTLCHKVFKSH
>NZ_CP045538.2|WP_112842924.1|2856040_2857144_+|Flp-pilus-assembly-complex-ATPase-component-TadA
MNNTIHTATEFIEQLLRHSLAQRVSDLHLEPQQNSLRIRARIDNHLVLFSPPDNKLADEILTRLKILANINIAEKRLPQDGQFNWSYQKNNYSIRVATLPTLYGEKIVLRLMNNLQQPQLAQLGFQTIHLTLLKKYLTQPQGMILVTGPTGSGKTLTLYSCLQYLNKDNRNINSIEDPIELPLQGINQTQITEKAGITFATILRALLRQDPDVIMIGEIRDQQTAEIAIKAAQTGHLVLSTLHTNSTQATLARLANLGIAKDLIDSCVKLIISQRLVRCLCSNCKYPSPEQRNFIINNQQIILPNWQATGCQFCYSGYKGRTAIYDCFELAKQSLPSPYALFNSGIELIKKGITSLDEVYQVVGDIE
>NZ_CP045538.2|WP_112842923.1|2857140_2858340_+|transporter
MKLHFIYRYNALTYQGKWLSGNVVAQSKHEVIDQLIQQQKLPVKIRLYRVILFQNRDKQYRIQLLEQLALLLHSGLALLPALTLLKEECRYLHWQCVLNDIIFHLNQGGALSKQLSRYPLYFPANLTHFIYIGEESGKLDEVLLLQTTQLKNQRDLIKKIIKAFQYPLFLLLTLIVITISMLIYVLPEYQSLYSAFNTELPTLTLTLNRCSQWFSQYSLIILLFILIISYSYYTIKHHSAKFRDIEQRCWLNLPYLGILLRYHQLHIIFQIMTITQQAGLPLLQGLKIITEQLTHSLYQRALTDMIAHITQGKSLSSFMRHNPLFPPICYQFISSAENSGQLQFFCQQLTHWFYHQLEERLDSVKTWLEPILMTLIALITGTLIIAMYLPVLQLGDTIH
>NZ_CP045538.2|WP_060555640.1|2858617_2859232_+|dephospho-CoA-kinase
MTYTVALTGGIGSGKTTIANGFASLGVPLVDADVIARLVVEPDSPGLKALQQHFGDTILLPDGKLNRAQLRHIIFQNQQEKAWVNQLLHPLIQQETQKQIQQIRAPYFIWVVPLLVENKLTHLADRILVVDVTEEEQITRTMQRDGVSRDHVLKILQAQAKREQRLAVADDIIENHDNSLNQDEQIKRLHQHYLELAQKSNTGQ
>NZ_CP045538.2|WP_004250354.1|2859234_2859987_+|cell-division-protein-ZapD
MSEETSTIIFEHPLNEKMRSWLRIENSLIQLNSFQSINSLSSALSFFRAVSEFIEVLDRGEIRAELLKELEKRQKKLQQWLSFPNVDKEIVSHIINELSESACALSKAPRIGQHLKQDKIISLVKQRLSIPGGCCSFDVPTLHLWLNLPQTVRTEKLTCWQEGLYPLQNALNALLTLIRQSDTFKPVLSHSGFYQDSTEEGELLRIKLLASQQIYPQVSGHKNRYAIRFLPLDSEHGTIPSELPFEISCC

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Crispr_ID: NZ_CP045538_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045538_3

3946071-3946210

Orphan

Consensus_repeat	Method
CCCAGTTCCCAACTATTTTGTCA	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP045538_3

>merge|NZ_CP045538|3|3946071-3946210|PILER-CR
AGTTCCAAACTATTTTGTCATTTTTAATTTTCGTATTAGCTTACGACGCTACACCCAGTTCCCATCTATTTTGTCACTCTTCCCTAAATAATCCTTAAAAACTCCATTTCCACCCCTCCCAGTTCCCAACTATTTTGTCC

>NZ_CP045538|3|1|3946071-3946210|PILER-CR
AGTTCCAAACTATTTTGTCATTT	TTAATTTTCGTATTAGCTTACGACGCTACACCC
AGTTCCCATCTATTTTGTCACTC	TTCCCTAAATAATCCTTAAAAACTCCATTTCCACCCCTCCC
AGTTCCCAACTATTTTGTCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045538.2\|WP_112843228.1\|3952728_3953208_+\|Hcp-family-type-VI-secretion-system-effector	unknown	unknown	gnl\|CDD\|213799
NZ_CP045538.2\|WP_001206315.1\|3942033_3942822_-\|ANT(3'')-Ia-family-aminoglycoside-nucleotidyltransferase-AadA1	unknown	unknown	gnl\|CDD\|184296
NZ_CP045538.2\|WP_049220169.1\|3954767_3955580_-\|phosphonoacetaldehyde-hydrolase	unknown	unknown	gnl\|CDD\|184075
NZ_CP045538.2\|WP_112843227.1\|3953231_3953636_-\|DUF1240-domain-containing-protein	unknown	unknown	gnl\|CDD\|336520
NZ_CP045538.2\|WP_000777554.1\|3943498_3943972_-\|trimethoprim-resistant-dihydrofolate-reductase-DfrA1	unknown	unknown	gnl\|CDD\|238127
NZ_CP045538.2\|WP_000497519.1\|3944954_3945281_+\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|131303
NZ_CP045538.2\|WP_112843229.1\|3952196_3952427_-\|YjeO-family-protein	unknown	unknown	gnl\|CDD\|337858
NZ_CP045538.2\|WP_152964394.1\|3937396_3938565_+\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP045538.2\|WP_001353740.1\|3945468_3945708_-\|DUF1819-family-protein	unknown	unknown	gnl\|CDD\|378066
NZ_CP045538.2\|WP_000704156.1\|3942879_3943404_-\|streptothricin-N-acetyltransferase-Sat2	unknown	unknown	gnl\|CDD\|366181
NZ_CP045538.2\|WP_001444089.1\|3941460_3941958_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045538.2\|WP_112843230.1\|3951736_3952141_-\|DUF1240-domain-containing-protein	unknown	unknown	gnl\|CDD\|336520
NZ_CP045538.2\|WP_000071896.1\|3944303_3944840_+\|class-2-integron-integrase-IntI2	unknown	unknown	gnl\|CDD\|131303
NZ_CP045538.2\|WP_020946472.1\|3947722_3949414_+\|putative-2-aminoethylphosphonate-ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|274495
NZ_CP045538.2\|WP_112843226.1\|3953628_3954465_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045538.2\|WP_001271300.1\|3940241_3940619_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045538.2\|WP_000119696.1\|3941028_3941400_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045538.2\|WP_112843251.1\|3949462_3950470_+\|putative-2-aminoethylphosphonate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|274494
NZ_CP045538.2\|WP_049220590.1\|3946633_3947710_+\|putative-2-aminoethylphosphonate-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|274496
NZ_CP045538.2\|WP_036908625.1\|3950534_3951662_+\|TIGR03364-family-FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|132407

Protein	Function_ID	Function_description	E-value
NZ_CP045538.2\|WP_112843228.1\|3952728_3953208_+\|Hcp-family-type-VI-secretion-system-effector	gnl\|CDD\|213799	TIGR03344, VI_effect_Hcp1, type VI secretion system effector, Hcp1 family. This family includes Hcp1 (hemolysin coregulated protein 1), an exported, homohexameric ring-forming virulence protein from Pseudomonas aeruginosa. Hcp1 lacks a conventional signal sequence and is instead exported by means of the type VI secretion system, encoded by a pathogenicity cluster of a class previously designated IAHP (IcmF-associated homologous protein). Homologs of Hcp1, in this protein family, are found in various bacteria of which most but not all are known pathogens. Pathogens may have many multiple members of this family, with three to ten in Erwinia carotovora, Yersinia pestis, uropathogenic Escherichia coli, and the insect pathogen Photorhabdus luminescens. [Cellular processes, Pathogenesis].	1.13388e-59
NZ_CP045538.2\|WP_001206315.1\|3942033_3942822_-\|ANT(3'')-Ia-family-aminoglycoside-nucleotidyltransferase-AadA1	gnl\|CDD\|184296	PRK13746, PRK13746, aminoglycoside resistance protein; Provisional.	1.61477e-174
NZ_CP045538.2\|WP_049220169.1\|3954767_3955580_-\|phosphonoacetaldehyde-hydrolase	gnl\|CDD\|184075	PRK13478, PRK13478, phosphonoacetaldehyde hydrolase; Provisional.	3.79538e-158
NZ_CP045538.2\|WP_000777554.1\|3943498_3943972_-\|trimethoprim-resistant-dihydrofolate-reductase-DfrA1	gnl\|CDD\|238127	cd00209, DHFR, Dihydrofolate reductase (DHFR). Reduces 7,8-dihydrofolate to 5,6,7,8-tetrahydrofolate with NADPH as a cofactor. This is an essential step in the biosynthesis of deoxythymidine phosphate since 5,6,7,8-tetrahydrofolate is required to regenerate 5,10-methylenetetrahydrofolate which is then utilized by thymidylate synthase. Inhibition of DHFR interrupts thymidilate synthesis and DNA replication, inhibitors of DHFR (such as Methotrexate) are used in cancer chemotherapy. 5,6,7,8-tetrahydrofolate also is involved in glycine, serine, and threonine metabolism and aminoacyl-tRNA biosynthesis.	3.39419e-57
NZ_CP045538.2\|WP_000497519.1\|3944954_3945281_+\|tyrosine-type-recombinase/integrase	gnl\|CDD\|131303	TIGR02249, Integrase/recombinase_E2_protein., integron integrase. Members of this family are integrases associated with integrons (and super-integrons), which are systems for incorporating and expressing cassettes of laterally transferred DNA. Incorporation occurs at an attI site. A super-integron, as in Vibrio sp., may include over 100 cassettes. This family belongs to the phage integrase family (pfam00589) that also includes recombinases XerC (TIGR02224) and XerD (TIGR02225), which are bacterial housekeeping proteins. Within this family of integron integrases, some are designated by class, e.g. IntI4, a class 4 integron integrase from Vibrio cholerae N16961. [DNA metabolism, DNA replication, recombination, and repair, Mobile and extrachromosomal element functions, Other].	2.82591e-45
NZ_CP045538.2\|WP_112843229.1\|3952196_3952427_-\|YjeO-family-protein	gnl\|CDD\|337858	pfam10840, DUF2645, Protein of unknown function (DUF2645). This family of proteins appear to be restricted to Enterobacteriaceae. Some members in the family are annotated as YjeO however no function for this protein is currently known.	1.87871e-18
NZ_CP045538.2\|WP_112843227.1\|3953231_3953636_-\|DUF1240-domain-containing-protein	gnl\|CDD\|336520	pfam06836, DUF1240, Protein of unknown function (DUF1240). This family consists of a number of hypothetical putative membrane proteins which seem to be specific to Yersinia pestis. The function of this family is unknown.	3.18933e-32
NZ_CP045538.2\|WP_001353740.1\|3945468_3945708_-\|DUF1819-family-protein	gnl\|CDD\|378066	pfam08849, DUF1819, Putative inner membrane protein (DUF1819). These proteins are functionally uncharacterized. Several are annotated as putative inner membrane proteins.	2.15941e-15
NZ_CP045538.2\|WP_000704156.1\|3942879_3943404_-\|streptothricin-N-acetyltransferase-Sat2	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	4.87486e-19
NZ_CP045538.2\|WP_112843230.1\|3951736_3952141_-\|DUF1240-domain-containing-protein	gnl\|CDD\|336520	pfam06836, DUF1240, Protein of unknown function (DUF1240). This family consists of a number of hypothetical putative membrane proteins which seem to be specific to Yersinia pestis. The function of this family is unknown.	6.48531e-30
NZ_CP045538.2\|WP_000071896.1\|3944303_3944840_+\|class-2-integron-integrase-IntI2	gnl\|CDD\|131303	TIGR02249, Integrase/recombinase_E2_protein., integron integrase. Members of this family are integrases associated with integrons (and super-integrons), which are systems for incorporating and expressing cassettes of laterally transferred DNA. Incorporation occurs at an attI site. A super-integron, as in Vibrio sp., may include over 100 cassettes. This family belongs to the phage integrase family (pfam00589) that also includes recombinases XerC (TIGR02224) and XerD (TIGR02225), which are bacterial housekeeping proteins. Within this family of integron integrases, some are designated by class, e.g. IntI4, a class 4 integron integrase from Vibrio cholerae N16961. [DNA metabolism, DNA replication, recombination, and repair, Mobile and extrachromosomal element functions, Other].	3.54716e-72
NZ_CP045538.2\|WP_020946472.1\|3947722_3949414_+\|putative-2-aminoethylphosphonate-ABC-transporter-permease-subunit	gnl\|CDD\|274495	TIGR03262, PhnU2, putative 2-aminoethylphosphonate ABC transporter, permease protein. [Transport and binding proteins, Amino acids, peptides and amines].	0
NZ_CP045538.2\|WP_152964394.1\|3937396_3938565_+\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	5.53105e-137
NZ_CP045538.2\|WP_112843251.1\|3949462_3950470_+\|putative-2-aminoethylphosphonate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|274494	TIGR03261, phnS2, putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein. This ABC transporter extracellular solute-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely. [Transport and binding proteins, Amino acids, peptides and amines].	0
NZ_CP045538.2\|WP_049220590.1\|3946633_3947710_+\|putative-2-aminoethylphosphonate-ABC-transporter-ATP-binding-protein	gnl\|CDD\|274496	TIGR03265, PhnT2, putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely. [Transport and binding proteins, Amino acids, peptides and amines].	0
NZ_CP045538.2\|WP_036908625.1\|3950534_3951662_+\|TIGR03364-family-FAD-dependent-oxidoreductase	gnl\|CDD\|132407	TIGR03364, putative_secreted_oxidoreductase, FAD dependent oxidoreductase TIGR03364. This clade of FAD dependent oxidoreductases (members of the pfam01266 family) is syntenically associated with a family of proposed phosphonatase-like enzymes (TIGR03351) and is also found (less frequently) in association with phosphonate transporter components. A likely role for this enzyme involves the oxidative deamination of an aminophosphonate differring slightly from 2-aminoethylphosphonate, possibly 1-hydroxy-2-aminoethylphosphonate (see the comments for TIGR03351). Many members of the larger FAD dependent oxidoreductase family act as amino acid oxidative deaminases.	9.47687e-147

>NZ_CP045538.2|WP_001353740.1|3945468_3945708_-|DUF1819-family-protein
MTPFRYNSDLTSGSLQTRECRIITGLLLQELDEAAWDKAMYKENVLQKRTQSTVRRISSALRKRLEHLSSDFWAFAFLC
>NZ_CP045538.2|WP_000497519.1|3944954_3945281_+|tyrosine-type-recombinase/integrase
MFVFPSSTLCNHPYNGKLCRHHLHDSVARKALKAAVQKAGIVSKRVTCHTFRHSFATHLLQAGRDIRTVQELLGHNDVKTTQIYTHVLGQHFAGTTSPADGLMLLINQ
>NZ_CP045538.2|WP_000071896.1|3944303_3944840_+|class-2-integron-integrase-IntI2
MSNSPFLNSIRTDMRQKGYALKTEKTYLHWIKRFILFHKKRHPQTMGSEEVRLFLSSLANSRHVAINTQKIALNALAFLYNRFLQQPLGDIDYIPASKPRRLPSVISANEVQRILQVMDTRNQVIFTLLYGAGLRINECLRLRVKDFDFDNGCITVHDGKGGKSRNSLLPTRLIPAIK
>NZ_CP045538.2|WP_000777554.1|3943498_3943972_-|trimethoprim-resistant-dihydrofolate-reductase-DfrA1
MKLSLMVAISKNGVIGNGPDIPWSAKGEQLLFKAITYNQWLLVGRKTFESMGALPNRKYAVVTRSSFTSDNENVLIFPSIKDALTNLKKITDHVIVSGGGEIYKSLIDQVDTLHISTIDIEPEGDVYFPEIPSNFRPVFTQDFASNINYSYQIWQKG
>NZ_CP045538.2|WP_000704156.1|3942879_3943404_-|streptothricin-N-acetyltransferase-Sat2
MKISVIPEQVAETLDAENHFIVREVFDVHLSDQGFELSTRSVSPYRKDYISDDDSDEDSACYGAFIDQELVGKIELNSTWNDLASIEHIVVSHTHRGKGVAHSLIEFAKKWALSRQLLGIRLETQTNNVPACNLYAKCGFTLGGIDLFTYKTRPQVSNETAMYWYWFSGAQDDA
>NZ_CP045538.2|WP_001206315.1|3942033_3942822_-|ANT(3'')-Ia-family-aminoglycoside-nucleotidyltransferase-AadA1
MREAVIAEVSTQLSEVVGVIERHLEPTLLAVHLYGSAVDGGLKPHSDIDLLVTVTVRLDETTRRALINDLLETSASPGESEILRAVEVTIVVHDDIIPWRYPAKRELQFGEWQRNDILAGIFEPATIDIDLAILLTKAREHSVALVGPAAEELFDPVPEQDLFEALNETLTLWNSPPDWAGDERNVVLTLSRIWYSAVTGKIAPKDVAADWAMERLPAQYQPVILEARQAYLGQEDRLASRADQLEEFVHYVKGEITKVVGK
>NZ_CP045538.2|WP_001444089.1|3941460_3941958_-|hypothetical-protein
MRDLLKVVLSLVLAMASGQALADLPIVLVDEARLPYDYSPSNYDISPSNYDNSISNYDNSPSNYDNSESNYDNSSSNYDNSRNGNRRLIYSANGSRTFAGYYVIANNGTTNFFSTSGKRMFYTPKGGRGVYGGKDGSFCGALVVINGQFSLALTDNGLKIMYLSN
>NZ_CP045538.2|WP_000119696.1|3941028_3941400_-|hypothetical-protein
MSYEPPRDGYTNGYIVDVMYDNRPSKYPAVFRTYVRIPDYVELDNAEELADAIIREVELKEAWLTRVLGNSADPDASVGKWDRRLAQCGGIDEMSSGVQATYFSPNGQLVGLVAYIDAEWMDE
>NZ_CP045538.2|WP_001271300.1|3940241_3940619_-|hypothetical-protein
MSAAKALAYALCDKLESKKVDEVVRNLVSSGWNIREVAWEASSFDHEMPYFDTGRDFDIGFPDTLSSKIEFLTANGSIVQARARLHFKQALIFAKASKHVAALKNSLDYYYGSSVIPPQNHGGYL
>NZ_CP045538.2|WP_152964394.1|3937396_3938565_+|IS3-family-transposase
MKKRNFSAEFRRESAQLVVDQNYTVADAAKAMNVGLSTLTRWVKQLRDERAGKTPKASPITPEQIEIRELKKKIQRIEMENEIFKKGYRALDVRLPEQVSVIGKLRAHYPVATLCCVFGVHRSSYRYRENRPDNPDGRRAVLRSQVQELHGLSHGSAGARSIAVMATHRGFRMGRWLAGRLMKEMGLVSCQQPVHRYKRGGHEHIAIPNHLERQFAVTEPNQVWCGDVTYIWTGKRWAYLAVVLDLFARKPVGWAMSFSPDSKLTTKALEMAWEIRNKPSGLMFHSDQGSHYTSRQFRQLLWRYRIKQSMSRRGNCWDNSPMERFFRSLKNEWVPVTGYISFSEAAHAITDYIVGYYSEVRPHEYNGGLPPNESENQYRKNSKTVANFS
>NZ_CP045538.2|WP_049220590.1|3946633_3947710_+|putative-2-aminoethylphosphonate-ABC-transporter-ATP-binding-protein
MLQFTINSQNGSMPHIRVENIQKRFNQFIALDGVSLEIKQGELVCLLGPSGCGKTTLLRCIAGLETQDHGSIFNYDNNISHLPPQARDYGILFQSYALFPNLTVQQNIAYGLAGQPRNVIKNRVNEMLELVGLQDRKKKYPGELSGGQQQRVALARALAPAPSLLLLDEPMSALDAQVREHLCVELRNLQQSLNITTLMVTHNQDEAMLMADRIAVMNNGKVEQYGSSEEIYNHPQTPFVAEFVGKGNWLPFNRNQHGEAMIGSREVQLKHTAVPHNQGRLFCRPESIKINPIQNKHNQYDANIQNVVFLGSRCIMKFELDHLPGHLLQAEISAAELHSIQNGKVKVTLPANELHIFA
>NZ_CP045538.2|WP_020946472.1|3947722_3949414_+|putative-2-aminoethylphosphonate-ABC-transporter-permease-subunit
MSVIVPTKSINRLDSFFVAGGKLFIICLLTLGVLLPLLAIFWRGFTPDISQGGGFQAAIDLFTSANFLWLVGNSISVSLSVAVITVPLAYLFAYALHRTLIPFKSLWRGISLLPLLAPSMLPGIALVYLFGNQGLLRSLLTESIYGYWGLVLGEVIYTFPHALMILLSALSMSDARLFDAASSLGASSWRTFRSVTWSSSRHGIFAALCLVFTLTITDFGIPVVVGGDYQVLALEAYKAVLGQQQFGRGALIGMLLLLPALLTFGVDVWLRKRQRDAMSSRAQFYLPKANFQRDTLYLIFVMLICALFLLVFGTAVYSSFIQFWPYNLSFSLRHYNFEGLPGGWLAYTNSIILAFYTATIGCFLIFMGAYLIEKTASHSWLNNLLRMLSFVPMAVPGLVLGLGYVFFFNLPNNPLNFLYGSMVLLVLCSIAHFFTTAYMTASTALRQLDKEFEAASLSLKAPLYRHFWRITIPLCLPALLDIYRYLFVSAMTTVSAAIFLYSPDTILAAVAVLNMDDAGNIGGAAAMSTLILTTSAGVSILLSIASQGVIRRTQAWHQREAKQ
>NZ_CP045538.2|WP_112843251.1|3949462_3950470_+|putative-2-aminoethylphosphonate-ABC-transporter-substrate-binding-protein
MLKKLILATSLLFSAGTVFAATEITVYTAIESEQLQAYKQAFEAKYPDIKIKWVRDSTGIITAKLLAEKDRPQADVVWGLAASSLAILKAQNMLEPYAPAQLDDIDVKFRDSNNPPTWVGMDVWAATICYNTIEAQKLGLSKPTSWQDLTKPEYKGKIVMPNPASSGTGFLDVSAWLQIFGEQEGWAYMDKLHQNIGQYVHSGSKPCKMAASGEYPIGISFEYPAIQLKRQGAPLDIILPQEGLGWDIEATAIIKGTNKRDAAQKLADFSASKEAMKLYSANFAVLANTSVPVSQTELPRDYAQRLIKNDFIWAAEKRDTILTEWRKRYDGKRAK
>NZ_CP045538.2|WP_036908625.1|3950534_3951662_+|TIGR03364-family-FAD-dependent-oxidoreductase
MKFDIAVIGAGIIGLSHAYAAAQRGLRVAIFERSYTPVGASVRNFGHGLILGQAPGKMLDLAKNSREIWATMAKQAKFLTRQKGTYLLARTQSEHAVLEAFVDGRAKTYGYDCELLSKTQLATVYGGQLQHHRAALHGKEDQVLFSREAIPQLAAYLGSLANVTSYFSTLVRDIDVDTGALITSNGTFSAEKIIVCSGHDYQTLLADEIKKLDPIVCRLQMLRVTAEQNIGLAHALMTGLSCTHYGAFADLPEAQALAKEIKMQSPLIEQYGIHLLITPTPYGDLIIGDSHEYSLDAQPFNSEEVDNLLIELAEHTLGCSVQVKERWQGVYGAKGKEPISILTPSEKVTAVLMRTGLGMSVGPGLGEQNIRQLFD
>NZ_CP045538.2|WP_112843230.1|3951736_3952141_-|DUF1240-domain-containing-protein
MIKIEPVKLILSSIAILFIAIFSIYISTSYYITYFLMEDRILFSFQTGLLVFATPLILYFSYYSFILGYKKKLQRMNNKVAGICAGIAIVGIVFSFFFSIYVGLDLTSKGYYRCYKSSAFAPNEYVIAKEMCKK
>NZ_CP045538.2|WP_112843229.1|3952196_3952427_-|YjeO-family-protein
MNILSISDYEWMIGEGDIDNLCQLPLNGRYVIEPILILIPCILLLFLEKNTKLRWGYVTITVMYIIWSFYLRFNFC
>NZ_CP045538.2|WP_112843228.1|3952728_3953208_+|Hcp-family-type-VI-secretion-system-effector
MAYPTYLVLKGKNQGLISAGCSTSDSIGNRYQIGHENEIQIISLNYGSFREQNASYRPIVFTKPIDKSSPLLSVALDSNEVLEATFIFYRTSQNGQLEKYYEIKLTGVSLIEISDIFPDSIKDNESMPYQRIQMKYESISRSHLMANTSSYSINSEIIK
>NZ_CP045538.2|WP_112843227.1|3953231_3953636_-|DUF1240-domain-containing-protein
MVKINSPKLYLIAIFLLSLALFCFYDSIIYYKNYFMMKDRILFSFQTGLLFFAAPLIIYFSYLIFICGYTKKTQRMNNKVAGICTGIAIVGIVFSFFFSIYVGLDLTSKGYYRCYKSSAFAPNEYVIAKEMCKK
>NZ_CP045538.2|WP_112843226.1|3953628_3954465_-|hypothetical-protein
MGYVYDTTVIDWDKEYKYANYSIIKEIINNEKDDDNVAAIITVEEAEYILSNESTPTPFKSSKDTLLGTIDFISNFSGNLYEAYRLDRIISEFGNINIRATQYTGPNGNVYIRLSGHPGVRFFLNGTRYLANNPRILFMGVGTQGINDISVGAARFAIVFSAAYRVVELIFKNEYTLVDFFVNVTMDMAKLAISTQISTAIVGGLTTTGLITGGSVIVVSIGVFLIGLAIAYALYKLDDKYQISENIIKALKNNRSKKTTPAYHPDQFFSQWGKFSHG
>NZ_CP045538.2|WP_049220169.1|3954767_3955580_-|phosphonoacetaldehyde-hydrolase
MNKSVEAVILDWAGTVVDFGSFAPTQIFVDAFAQAFNFKISLSEARGPMGMGKIDHIRALLNEPNIRTRWTAQFGHPPSEEEAQHIYCTFMPLQIAQVVHFAKPIEGALEAISTIRAQGIKIGSCSGYPKAVMDVLVPKAAEYGYQPDCVVASDEIAAGSRPGPWMALKNVIELGIMSVARCVKVDDAVTGIAEGLNAGMWTVGLSVSGNEFGATFEQYQTMEQAEIENRKRIAENKLRTAGAHYIIDTLANLPAVIEDINQRIANNQKP

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	NZ_KX774387	Providencia rettgeri strain 30905 plasmid pC131, complete sequence	10387-10419	0	1.0
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	NZ_CP053895	Proteus mirabilis strain JPM24 plasmid pJPM24, complete sequence	72648-72680	0	1.0
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	NZ_KU963389	Escherichia coli strain ECO37 plasmid ECO37P1, complete sequence	15133-15165	0	1.0
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	NZ_CP047288	Proteus cibarius strain G11 plasmid p152, complete sequence	62060-62092	0	1.0
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	NZ_CP044485	Acinetobacter schindleri strain HZE30-1 plasmid pHZE30-1-2, complete sequence	28402-28434	0	1.0
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	NZ_CP025853	Escherichia coli strain 510016 plasmid p510016_36, complete sequence	25816-25848	0	1.0
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	NZ_KT754165	Shigella dysenteriae 1 strain 93-531-1 plasmid p93-531-1, complete sequence	23240-23272	0	1.0
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	NZ_CP053372	Proteus cibarius strain G32 plasmid pG32-177, complete sequence	57315-57347	0	1.0
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	NZ_CP024247	Escherichia coli O27:H7 strain B4103-1 plasmid unnamed2	64739-64771	0	1.0
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	NZ_CP053043	Proteus cibarius strain HNCF44W plasmid pHNCF44W_NDM-1, complete sequence	95158-95190	0	1.0
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	JX469830	Uncultured bacterium plasmid pG527, complete sequence	41349-41381	0	1.0
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	NZ_CP013819	Piscirickettsia salmonis strain AY3800B plasmid p3PS10, complete sequence	10767-10799	0	1.0
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	CP025925	Escherichia coli strain 520873 plasmid p520873_36, complete sequence	13633-13665	0	1.0
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	CP025875	Escherichia coli strain 503458 plasmid p503458_37, complete sequence	10830-10862	0	1.0
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	NZ_CP013795	Piscirickettsia salmonis strain AY6297B plasmid p4PS8, complete sequence	10767-10799	0	1.0
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	NZ_CP023380	Escherichia coli strain 127 plasmid p43, complete sequence	15396-15428	0	1.0
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	NZ_CP011314	Klebsiella pneumoniae subsp. pneumoniae strain 234-12 plasmid pKpn23412-362, complete sequence	172056-172088	0	1.0
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	NC_008357	Pseudomonas aeruginosa plasmid pBS228, complete sequence	68063-68095	0	1.0
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	NZ_CP027138	Escherichia coli strain AR_0369 plasmid unnamed2	74789-74821	0	1.0
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	NZ_CP022673	Shigella sonnei strain 866 plasmid p866, complete sequence	78315-78347	0	1.0
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	NZ_CP045128	Acinetobacter indicus strain XG03 plasmid pXG03-X3, complete sequence	89271-89303	0	1.0
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	NZ_LT985250	Escherichia coli strain 170 plasmid RCS38_p, complete sequence	152291-152323	0	1.0
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	NZ_MK360096	Salmonella enterica strain 13-SA02717 plasmid pSE13-SA02717, complete sequence	17850-17882	0	1.0
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	NZ_CP053897	Providencia rettgeri strain YPR31 plasmid pYPR31, complete sequence	75880-75912	0	1.0
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	NZ_MF150120	Klebsiella pneumoniae strain A64477 plasmid pKP64477d, complete sequence	40084-40116	0	1.0
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	NZ_KX756453	Klebsiella pneumoniae strain 1194/11 plasmid pKP1194a, complete sequence	42453-42485	0	1.0
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	NC_015472	Escherichia coli plasmid pECTm80, complete sequence	13464-13496	0	1.0
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	NZ_CP013800	Piscirickettsia salmonis strain AY6532B plasmid p4PS9, complete sequence	12090-12122	0	1.0
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	MG516911	Proteus mirabilis plasmid pPm60, complete sequence	57128-57160	0	1.0
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	NZ_CP003997	Klebsiella pneumoniae subsp. pneumoniae Kp13 plasmid pKP13d, complete sequence	42619-42651	0	1.0
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	CP054380	Escherichia coli strain SCU-175 plasmid pSCU-175-1, complete sequence	38153-38185	0	1.0
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	NC_002525	Escherichia coli K-12 plasmid R721, complete sequence	10525-10557	0	1.0
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	NZ_CP048015	Acinetobacter towneri strain 205 plasmid pAT205, complete sequence	49215-49247	0	1.0
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	NZ_CP034054	Klebsiella pneumoniae strain KP_NORM_BLD_2015_112126 plasmid unnamed1, complete sequence	140941-140973	0	1.0
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	NZ_CP047114	Proteus mirabilis strain SCBX1.1 plasmid plas1.1.2, complete sequence	46467-46499	0	1.0
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	NZ_CP034046	Klebsiella pneumoniae strain KP_NORM_BLD_2014_104014 plasmid unnamed1, complete sequence	150963-150995	0	1.0
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	NZ_CP027700	Klebsiella pneumoniae strain KP30835 plasmid unnamed5, complete sequence	7471-7503	0	1.0
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	NZ_CP053899	Proteus mirabilis strain YPM35 plasmid pJPM35-1, complete sequence	116699-116731	0	1.0
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	NZ_MK264770	Klebsiella pneumoniae strain KP89 plasmid pKP89, complete sequence	42620-42652	0	1.0
NZ_CP045538_3	3.2\|3946150\|41\|NZ_CP045538\|PILER-CR	3946150-3946190	41	NZ_KX774387	Providencia rettgeri strain 30905 plasmid pC131, complete sequence	10443-10483	0	1.0
NZ_CP045538_3	3.2\|3946150\|41\|NZ_CP045538\|PILER-CR	3946150-3946190	41	NZ_MF150120	Klebsiella pneumoniae strain A64477 plasmid pKP64477d, complete sequence	40020-40060	0	1.0
NZ_CP045538_3	3.2\|3946150\|41\|NZ_CP045538\|PILER-CR	3946150-3946190	41	NZ_CP053895	Proteus mirabilis strain JPM24 plasmid pJPM24, complete sequence	72704-72744	0	1.0
NZ_CP045538_3	3.2\|3946150\|41\|NZ_CP045538\|PILER-CR	3946150-3946190	41	NZ_KX756453	Klebsiella pneumoniae strain 1194/11 plasmid pKP1194a, complete sequence	42389-42429	0	1.0
NZ_CP045538_3	3.2\|3946150\|41\|NZ_CP045538\|PILER-CR	3946150-3946190	41	NZ_KU963389	Escherichia coli strain ECO37 plasmid ECO37P1, complete sequence	15189-15229	0	1.0
NZ_CP045538_3	3.2\|3946150\|41\|NZ_CP045538\|PILER-CR	3946150-3946190	41	NZ_CP047288	Proteus cibarius strain G11 plasmid p152, complete sequence	62116-62156	0	1.0
NZ_CP045538_3	3.2\|3946150\|41\|NZ_CP045538\|PILER-CR	3946150-3946190	41	NC_015472	Escherichia coli plasmid pECTm80, complete sequence	13400-13440	0	1.0
NZ_CP045538_3	3.2\|3946150\|41\|NZ_CP045538\|PILER-CR	3946150-3946190	41	NZ_CP044485	Acinetobacter schindleri strain HZE30-1 plasmid pHZE30-1-2, complete sequence	28458-28498	0	1.0
NZ_CP045538_3	3.2\|3946150\|41\|NZ_CP045538\|PILER-CR	3946150-3946190	41	NZ_CP025853	Escherichia coli strain 510016 plasmid p510016_36, complete sequence	25872-25912	0	1.0
NZ_CP045538_3	3.2\|3946150\|41\|NZ_CP045538\|PILER-CR	3946150-3946190	41	NZ_KT754165	Shigella dysenteriae 1 strain 93-531-1 plasmid p93-531-1, complete sequence	23296-23336	0	1.0
NZ_CP045538_3	3.2\|3946150\|41\|NZ_CP045538\|PILER-CR	3946150-3946190	41	NZ_CP013800	Piscirickettsia salmonis strain AY6532B plasmid p4PS9, complete sequence	12026-12066	0	1.0
NZ_CP045538_3	3.2\|3946150\|41\|NZ_CP045538\|PILER-CR	3946150-3946190	41	NZ_CP053372	Proteus cibarius strain G32 plasmid pG32-177, complete sequence	57371-57411	0	1.0
NZ_CP045538_3	3.2\|3946150\|41\|NZ_CP045538\|PILER-CR	3946150-3946190	41	NZ_CP024247	Escherichia coli O27:H7 strain B4103-1 plasmid unnamed2	64795-64835	0	1.0
NZ_CP045538_3	3.2\|3946150\|41\|NZ_CP045538\|PILER-CR	3946150-3946190	41	NZ_CP053043	Proteus cibarius strain HNCF44W plasmid pHNCF44W_NDM-1, complete sequence	95214-95254	0	1.0
NZ_CP045538_3	3.2\|3946150\|41\|NZ_CP045538\|PILER-CR	3946150-3946190	41	MG516911	Proteus mirabilis plasmid pPm60, complete sequence	57064-57104	0	1.0
NZ_CP045538_3	3.2\|3946150\|41\|NZ_CP045538\|PILER-CR	3946150-3946190	41	JX469830	Uncultured bacterium plasmid pG527, complete sequence	41405-41445	0	1.0
NZ_CP045538_3	3.2\|3946150\|41\|NZ_CP045538\|PILER-CR	3946150-3946190	41	NZ_CP013819	Piscirickettsia salmonis strain AY3800B plasmid p3PS10, complete sequence	10823-10863	0	1.0
NZ_CP045538_3	3.2\|3946150\|41\|NZ_CP045538\|PILER-CR	3946150-3946190	41	NZ_CP003997	Klebsiella pneumoniae subsp. pneumoniae Kp13 plasmid pKP13d, complete sequence	42555-42595	0	1.0
NZ_CP045538_3	3.2\|3946150\|41\|NZ_CP045538\|PILER-CR	3946150-3946190	41	CP025925	Escherichia coli strain 520873 plasmid p520873_36, complete sequence	13689-13729	0	1.0
NZ_CP045538_3	3.2\|3946150\|41\|NZ_CP045538\|PILER-CR	3946150-3946190	41	CP025875	Escherichia coli strain 503458 plasmid p503458_37, complete sequence	10886-10926	0	1.0
NZ_CP045538_3	3.2\|3946150\|41\|NZ_CP045538\|PILER-CR	3946150-3946190	41	NZ_CP013795	Piscirickettsia salmonis strain AY6297B plasmid p4PS8, complete sequence	10823-10863	0	1.0
NZ_CP045538_3	3.2\|3946150\|41\|NZ_CP045538\|PILER-CR	3946150-3946190	41	CP054380	Escherichia coli strain SCU-175 plasmid pSCU-175-1, complete sequence	38089-38129	0	1.0
NZ_CP045538_3	3.2\|3946150\|41\|NZ_CP045538\|PILER-CR	3946150-3946190	41	NC_002525	Escherichia coli K-12 plasmid R721, complete sequence	10461-10501	0	1.0
NZ_CP045538_3	3.2\|3946150\|41\|NZ_CP045538\|PILER-CR	3946150-3946190	41	NZ_CP023380	Escherichia coli strain 127 plasmid p43, complete sequence	15452-15492	0	1.0
NZ_CP045538_3	3.2\|3946150\|41\|NZ_CP045538\|PILER-CR	3946150-3946190	41	NZ_CP011314	Klebsiella pneumoniae subsp. pneumoniae strain 234-12 plasmid pKpn23412-362, complete sequence	172112-172152	0	1.0
NZ_CP045538_3	3.2\|3946150\|41\|NZ_CP045538\|PILER-CR	3946150-3946190	41	NC_008357	Pseudomonas aeruginosa plasmid pBS228, complete sequence	68119-68159	0	1.0
NZ_CP045538_3	3.2\|3946150\|41\|NZ_CP045538\|PILER-CR	3946150-3946190	41	NZ_CP027138	Escherichia coli strain AR_0369 plasmid unnamed2	74845-74885	0	1.0
NZ_CP045538_3	3.2\|3946150\|41\|NZ_CP045538\|PILER-CR	3946150-3946190	41	NZ_CP022673	Shigella sonnei strain 866 plasmid p866, complete sequence	78371-78411	0	1.0
NZ_CP045538_3	3.2\|3946150\|41\|NZ_CP045538\|PILER-CR	3946150-3946190	41	NZ_CP048015	Acinetobacter towneri strain 205 plasmid pAT205, complete sequence	49151-49191	0	1.0
NZ_CP045538_3	3.2\|3946150\|41\|NZ_CP045538\|PILER-CR	3946150-3946190	41	NZ_CP034054	Klebsiella pneumoniae strain KP_NORM_BLD_2015_112126 plasmid unnamed1, complete sequence	140877-140917	0	1.0
NZ_CP045538_3	3.2\|3946150\|41\|NZ_CP045538\|PILER-CR	3946150-3946190	41	NZ_CP047114	Proteus mirabilis strain SCBX1.1 plasmid plas1.1.2, complete sequence	46403-46443	0	1.0
NZ_CP045538_3	3.2\|3946150\|41\|NZ_CP045538\|PILER-CR	3946150-3946190	41	NZ_CP034046	Klebsiella pneumoniae strain KP_NORM_BLD_2014_104014 plasmid unnamed1, complete sequence	150899-150939	0	1.0
NZ_CP045538_3	3.2\|3946150\|41\|NZ_CP045538\|PILER-CR	3946150-3946190	41	NZ_CP045128	Acinetobacter indicus strain XG03 plasmid pXG03-X3, complete sequence	89327-89367	0	1.0
NZ_CP045538_3	3.2\|3946150\|41\|NZ_CP045538\|PILER-CR	3946150-3946190	41	NZ_CP027700	Klebsiella pneumoniae strain KP30835 plasmid unnamed5, complete sequence	7407-7447	0	1.0
NZ_CP045538_3	3.2\|3946150\|41\|NZ_CP045538\|PILER-CR	3946150-3946190	41	NZ_LT985250	Escherichia coli strain 170 plasmid RCS38_p, complete sequence	152347-152387	0	1.0
NZ_CP045538_3	3.2\|3946150\|41\|NZ_CP045538\|PILER-CR	3946150-3946190	41	NZ_MK360096	Salmonella enterica strain 13-SA02717 plasmid pSE13-SA02717, complete sequence	17906-17946	0	1.0
NZ_CP045538_3	3.2\|3946150\|41\|NZ_CP045538\|PILER-CR	3946150-3946190	41	NZ_CP053899	Proteus mirabilis strain YPM35 plasmid pJPM35-1, complete sequence	116635-116675	0	1.0
NZ_CP045538_3	3.2\|3946150\|41\|NZ_CP045538\|PILER-CR	3946150-3946190	41	NZ_MK264770	Klebsiella pneumoniae strain KP89 plasmid pKP89, complete sequence	42556-42596	0	1.0
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	CP052804	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S973 plasmid pN17S0973, complete sequence	113091-113123	2	0.939
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	CP038508	Salmonella enterica subsp. enterica serovar Infantis strain FARPER-219 plasmid p-F219, complete sequence	228634-228666	2	0.939
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	CP052788	Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0611 plasmid pN19S0611, complete sequence	321488-321520	2	0.939
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	CP052786	Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0641 plasmid pN19S0641, complete sequence	10079-10111	2	0.939
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	CP052838	Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S097 plasmid pN16S097, complete sequence	13470-13502	2	0.939
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	CP051676	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1234 plasmid pN16S1234, complete sequence	201786-201818	2	0.939
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	CP052779	Salmonella enterica strain 19TN07GT06K-S plasmid pN19S1233, complete sequence	212524-212556	2	0.939
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	CP052832	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1040 plasmid pN17S1040, complete sequence	277011-277043	2	0.939
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	MN310378	Klebsiella pneumoniae strain A2293 plasmid pA2293-Ct2, complete sequence	73380-73412	2	0.939
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	CP052806	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S816 plasmid pN17S0816, complete sequence	282696-282728	2	0.939
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	CP052818	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1509 plasmid pN17S1509, complete sequence	1788-1820	2	0.939
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	NZ_MH476540	Klebsiella pneumoniae strain KP1276 plasmid pIA/C-KLUC, complete sequence	87104-87136	2	0.939
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	CP052795	Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0125 plasmid pN19S0125, complete sequence	166287-166319	2	0.939
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	NZ_CP047882	Salmonella enterica subsp. enterica serovar Infantis strain 119944 plasmid pESI, complete sequence	264306-264338	2	0.939
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	CP052802	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S976 plasmid pN17S0976, complete sequence	197576-197608	2	0.939
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	CP052840	Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S024 plasmid pN16S024, complete sequence	9544-9576	2	0.939
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	CP052836	Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S103 plasmid pN16S103, complete sequence	222743-222775	2	0.939
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	CP052828	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1126 plasmid pN17S1126, complete sequence	8856-8888	2	0.939
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	CP052826	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1245 plasmid pN17S0637, complete sequence	292607-292639	2	0.939
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	NZ_CP016409	Salmonella enterica subsp. enterica serovar Infantis strain FSIS1502916 plasmid pFSIS1502916, complete sequence	299316-299348	2	0.939
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	NZ_CP016407	Salmonella enterica subsp. enterica serovar Infantis strain FSIS1502169 plasmid pFSIS1502169, complete sequence	299920-299952	2	0.939
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	NZ_CP016413	Salmonella enterica subsp. enterica serovar Infantis strain CVM44454 plasmid pCVM44454, complete sequence	295999-296031	2	0.939
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	NZ_CP016411	Salmonella enterica subsp. enterica serovar Infantis strain N55391 plasmid pN55391, complete sequence	293612-293644	2	0.939
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	CP052814	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S349 plasmid pN17S0349, complete sequence	281790-281822	2	0.939
NZ_CP045538_3	3.1\|3946094\|33\|NZ_CP045538\|PILER-CR	3946094-3946126	33	NZ_MG764552	Klebsiella pneumoniae strain A1763 plasmid pA1763-Ct2, complete sequence	61314-61346	2	0.939
NZ_CP045538_3	3.2\|3946150\|41\|NZ_CP045538\|PILER-CR	3946150-3946190	41	NZ_CP053897	Providencia rettgeri strain YPR31 plasmid pYPR31, complete sequence	75936-75976	2	0.951
NZ_CP045538_3	3.2\|3946150\|41\|NZ_CP045538\|PILER-CR	3946150-3946190	41	MN310378	Klebsiella pneumoniae strain A2293 plasmid pA2293-Ct2, complete sequence	73436-73476	2	0.951
NZ_CP045538_3	3.2\|3946150\|41\|NZ_CP045538\|PILER-CR	3946150-3946190	41	NZ_MH476540	Klebsiella pneumoniae strain KP1276 plasmid pIA/C-KLUC, complete sequence	87160-87200	2	0.951
NZ_CP045538_3	3.2\|3946150\|41\|NZ_CP045538\|PILER-CR	3946150-3946190	41	NZ_MG764552	Klebsiella pneumoniae strain A1763 plasmid pA1763-Ct2, complete sequence	61250-61290	2	0.951

1. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to NZ_KX774387 (Providencia rettgeri strain 30905 plasmid pC131, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

2. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to NZ_CP053895 (Proteus mirabilis strain JPM24 plasmid pJPM24, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

3. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to NZ_KU963389 (Escherichia coli strain ECO37 plasmid ECO37P1, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

4. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to NZ_CP047288 (Proteus cibarius strain G11 plasmid p152, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

5. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to NZ_CP044485 (Acinetobacter schindleri strain HZE30-1 plasmid pHZE30-1-2, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

6. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to NZ_CP025853 (Escherichia coli strain 510016 plasmid p510016_36, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

7. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to NZ_KT754165 (Shigella dysenteriae 1 strain 93-531-1 plasmid p93-531-1, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

8. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to NZ_CP053372 (Proteus cibarius strain G32 plasmid pG32-177, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

9. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to NZ_CP024247 (Escherichia coli O27:H7 strain B4103-1 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

10. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to NZ_CP053043 (Proteus cibarius strain HNCF44W plasmid pHNCF44W_NDM-1, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

11. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to JX469830 (Uncultured bacterium plasmid pG527, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

12. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to NZ_CP013819 (Piscirickettsia salmonis strain AY3800B plasmid p3PS10, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

13. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to CP025925 (Escherichia coli strain 520873 plasmid p520873_36, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

14. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to CP025875 (Escherichia coli strain 503458 plasmid p503458_37, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

15. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to NZ_CP013795 (Piscirickettsia salmonis strain AY6297B plasmid p4PS8, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

16. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to NZ_CP023380 (Escherichia coli strain 127 plasmid p43, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

17. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to NZ_CP011314 (Klebsiella pneumoniae subsp. pneumoniae strain 234-12 plasmid pKpn23412-362, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

18. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to NC_008357 (Pseudomonas aeruginosa plasmid pBS228, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

19. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to NZ_CP027138 (Escherichia coli strain AR_0369 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

20. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to NZ_CP022673 (Shigella sonnei strain 866 plasmid p866, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

21. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to NZ_CP045128 (Acinetobacter indicus strain XG03 plasmid pXG03-X3, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

22. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to NZ_LT985250 (Escherichia coli strain 170 plasmid RCS38_p, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

23. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to NZ_MK360096 (Salmonella enterica strain 13-SA02717 plasmid pSE13-SA02717, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

24. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to NZ_CP053897 (Providencia rettgeri strain YPR31 plasmid pYPR31, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

25. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to NZ_MF150120 (Klebsiella pneumoniae strain A64477 plasmid pKP64477d, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

26. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to NZ_KX756453 (Klebsiella pneumoniae strain 1194/11 plasmid pKP1194a, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

27. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to NC_015472 (Escherichia coli plasmid pECTm80, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

28. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to NZ_CP013800 (Piscirickettsia salmonis strain AY6532B plasmid p4PS9, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

29. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to MG516911 (Proteus mirabilis plasmid pPm60, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

30. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to NZ_CP003997 (Klebsiella pneumoniae subsp. pneumoniae Kp13 plasmid pKP13d, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

31. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to CP054380 (Escherichia coli strain SCU-175 plasmid pSCU-175-1, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

32. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to NC_002525 (Escherichia coli K-12 plasmid R721, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

33. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to NZ_CP048015 (Acinetobacter towneri strain 205 plasmid pAT205, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

34. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to NZ_CP034054 (Klebsiella pneumoniae strain KP_NORM_BLD_2015_112126 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

35. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to NZ_CP047114 (Proteus mirabilis strain SCBX1.1 plasmid plas1.1.2, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

36. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to NZ_CP034046 (Klebsiella pneumoniae strain KP_NORM_BLD_2014_104014 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

37. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to NZ_CP027700 (Klebsiella pneumoniae strain KP30835 plasmid unnamed5, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

38. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to NZ_CP053899 (Proteus mirabilis strain YPM35 plasmid pJPM35-1, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

39. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to NZ_MK264770 (Klebsiella pneumoniae strain KP89 plasmid pKP89, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

40. spacer 3.2|3946150|41|NZ_CP045538|PILER-CR matches to NZ_KX774387 (Providencia rettgeri strain 30905 plasmid pC131, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

41. spacer 3.2|3946150|41|NZ_CP045538|PILER-CR matches to NZ_MF150120 (Klebsiella pneumoniae strain A64477 plasmid pKP64477d, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

42. spacer 3.2|3946150|41|NZ_CP045538|PILER-CR matches to NZ_CP053895 (Proteus mirabilis strain JPM24 plasmid pJPM24, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

43. spacer 3.2|3946150|41|NZ_CP045538|PILER-CR matches to NZ_KX756453 (Klebsiella pneumoniae strain 1194/11 plasmid pKP1194a, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

44. spacer 3.2|3946150|41|NZ_CP045538|PILER-CR matches to NZ_KU963389 (Escherichia coli strain ECO37 plasmid ECO37P1, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

45. spacer 3.2|3946150|41|NZ_CP045538|PILER-CR matches to NZ_CP047288 (Proteus cibarius strain G11 plasmid p152, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

46. spacer 3.2|3946150|41|NZ_CP045538|PILER-CR matches to NC_015472 (Escherichia coli plasmid pECTm80, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

47. spacer 3.2|3946150|41|NZ_CP045538|PILER-CR matches to NZ_CP044485 (Acinetobacter schindleri strain HZE30-1 plasmid pHZE30-1-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

48. spacer 3.2|3946150|41|NZ_CP045538|PILER-CR matches to NZ_CP025853 (Escherichia coli strain 510016 plasmid p510016_36, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

49. spacer 3.2|3946150|41|NZ_CP045538|PILER-CR matches to NZ_KT754165 (Shigella dysenteriae 1 strain 93-531-1 plasmid p93-531-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

50. spacer 3.2|3946150|41|NZ_CP045538|PILER-CR matches to NZ_CP013800 (Piscirickettsia salmonis strain AY6532B plasmid p4PS9, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

51. spacer 3.2|3946150|41|NZ_CP045538|PILER-CR matches to NZ_CP053372 (Proteus cibarius strain G32 plasmid pG32-177, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

52. spacer 3.2|3946150|41|NZ_CP045538|PILER-CR matches to NZ_CP024247 (Escherichia coli O27:H7 strain B4103-1 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

53. spacer 3.2|3946150|41|NZ_CP045538|PILER-CR matches to NZ_CP053043 (Proteus cibarius strain HNCF44W plasmid pHNCF44W_NDM-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

54. spacer 3.2|3946150|41|NZ_CP045538|PILER-CR matches to MG516911 (Proteus mirabilis plasmid pPm60, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

55. spacer 3.2|3946150|41|NZ_CP045538|PILER-CR matches to JX469830 (Uncultured bacterium plasmid pG527, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

56. spacer 3.2|3946150|41|NZ_CP045538|PILER-CR matches to NZ_CP013819 (Piscirickettsia salmonis strain AY3800B plasmid p3PS10, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

57. spacer 3.2|3946150|41|NZ_CP045538|PILER-CR matches to NZ_CP003997 (Klebsiella pneumoniae subsp. pneumoniae Kp13 plasmid pKP13d, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

58. spacer 3.2|3946150|41|NZ_CP045538|PILER-CR matches to CP025925 (Escherichia coli strain 520873 plasmid p520873_36, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

59. spacer 3.2|3946150|41|NZ_CP045538|PILER-CR matches to CP025875 (Escherichia coli strain 503458 plasmid p503458_37, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

60. spacer 3.2|3946150|41|NZ_CP045538|PILER-CR matches to NZ_CP013795 (Piscirickettsia salmonis strain AY6297B plasmid p4PS8, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

61. spacer 3.2|3946150|41|NZ_CP045538|PILER-CR matches to CP054380 (Escherichia coli strain SCU-175 plasmid pSCU-175-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

62. spacer 3.2|3946150|41|NZ_CP045538|PILER-CR matches to NC_002525 (Escherichia coli K-12 plasmid R721, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

63. spacer 3.2|3946150|41|NZ_CP045538|PILER-CR matches to NZ_CP023380 (Escherichia coli strain 127 plasmid p43, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

64. spacer 3.2|3946150|41|NZ_CP045538|PILER-CR matches to NZ_CP011314 (Klebsiella pneumoniae subsp. pneumoniae strain 234-12 plasmid pKpn23412-362, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

65. spacer 3.2|3946150|41|NZ_CP045538|PILER-CR matches to NC_008357 (Pseudomonas aeruginosa plasmid pBS228, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

66. spacer 3.2|3946150|41|NZ_CP045538|PILER-CR matches to NZ_CP027138 (Escherichia coli strain AR_0369 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

67. spacer 3.2|3946150|41|NZ_CP045538|PILER-CR matches to NZ_CP022673 (Shigella sonnei strain 866 plasmid p866, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

68. spacer 3.2|3946150|41|NZ_CP045538|PILER-CR matches to NZ_CP048015 (Acinetobacter towneri strain 205 plasmid pAT205, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

69. spacer 3.2|3946150|41|NZ_CP045538|PILER-CR matches to NZ_CP034054 (Klebsiella pneumoniae strain KP_NORM_BLD_2015_112126 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

70. spacer 3.2|3946150|41|NZ_CP045538|PILER-CR matches to NZ_CP047114 (Proteus mirabilis strain SCBX1.1 plasmid plas1.1.2, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

71. spacer 3.2|3946150|41|NZ_CP045538|PILER-CR matches to NZ_CP034046 (Klebsiella pneumoniae strain KP_NORM_BLD_2014_104014 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

72. spacer 3.2|3946150|41|NZ_CP045538|PILER-CR matches to NZ_CP045128 (Acinetobacter indicus strain XG03 plasmid pXG03-X3, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

73. spacer 3.2|3946150|41|NZ_CP045538|PILER-CR matches to NZ_CP027700 (Klebsiella pneumoniae strain KP30835 plasmid unnamed5, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

74. spacer 3.2|3946150|41|NZ_CP045538|PILER-CR matches to NZ_LT985250 (Escherichia coli strain 170 plasmid RCS38_p, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

75. spacer 3.2|3946150|41|NZ_CP045538|PILER-CR matches to NZ_MK360096 (Salmonella enterica strain 13-SA02717 plasmid pSE13-SA02717, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

76. spacer 3.2|3946150|41|NZ_CP045538|PILER-CR matches to NZ_CP053899 (Proteus mirabilis strain YPM35 plasmid pJPM35-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

77. spacer 3.2|3946150|41|NZ_CP045538|PILER-CR matches to NZ_MK264770 (Klebsiella pneumoniae strain KP89 plasmid pKP89, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

78. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to CP052804 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S973 plasmid pN17S0973, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

79. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to CP038508 (Salmonella enterica subsp. enterica serovar Infantis strain FARPER-219 plasmid p-F219, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

80. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to CP052788 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0611 plasmid pN19S0611, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

81. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to CP052786 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0641 plasmid pN19S0641, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

82. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to CP052838 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S097 plasmid pN16S097, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

83. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to CP051676 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1234 plasmid pN16S1234, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

84. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to CP052779 (Salmonella enterica strain 19TN07GT06K-S plasmid pN19S1233, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

85. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to CP052832 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1040 plasmid pN17S1040, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

86. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to MN310378 (Klebsiella pneumoniae strain A2293 plasmid pA2293-Ct2, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

87. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to CP052806 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S816 plasmid pN17S0816, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

88. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to CP052818 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1509 plasmid pN17S1509, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

89. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to NZ_MH476540 (Klebsiella pneumoniae strain KP1276 plasmid pIA/C-KLUC, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

90. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to CP052795 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0125 plasmid pN19S0125, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

91. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to NZ_CP047882 (Salmonella enterica subsp. enterica serovar Infantis strain 119944 plasmid pESI, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

92. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to CP052802 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S976 plasmid pN17S0976, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

93. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to CP052840 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S024 plasmid pN16S024, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

94. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to CP052836 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S103 plasmid pN16S103, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

95. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to CP052828 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1126 plasmid pN17S1126, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

96. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to CP052826 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1245 plasmid pN17S0637, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

97. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to NZ_CP016409 (Salmonella enterica subsp. enterica serovar Infantis strain FSIS1502916 plasmid pFSIS1502916, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

98. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to NZ_CP016407 (Salmonella enterica subsp. enterica serovar Infantis strain FSIS1502169 plasmid pFSIS1502169, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

99. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to NZ_CP016413 (Salmonella enterica subsp. enterica serovar Infantis strain CVM44454 plasmid pCVM44454, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

100. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to NZ_CP016411 (Salmonella enterica subsp. enterica serovar Infantis strain N55391 plasmid pN55391, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

101. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to CP052814 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S349 plasmid pN17S0349, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

102. spacer 3.1|3946094|33|NZ_CP045538|PILER-CR matches to NZ_MG764552 (Klebsiella pneumoniae strain A1763 plasmid pA1763-Ct2, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

103. spacer 3.2|3946150|41|NZ_CP045538|PILER-CR matches to NZ_CP053897 (Providencia rettgeri strain YPR31 plasmid pYPR31, complete sequence) position: , mismatch: 2, identity: 0.951

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccaccctc	Protospacer
***************************************..

104. spacer 3.2|3946150|41|NZ_CP045538|PILER-CR matches to MN310378 (Klebsiella pneumoniae strain A2293 plasmid pA2293-Ct2, complete sequence) position: , mismatch: 2, identity: 0.951

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctctcccctaaataatccttaaaaaccccatttccacccct	Protospacer
****.*********************.**************

105. spacer 3.2|3946150|41|NZ_CP045538|PILER-CR matches to NZ_MH476540 (Klebsiella pneumoniae strain KP1276 plasmid pIA/C-KLUC, complete sequence) position: , mismatch: 2, identity: 0.951

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctctcccctaaataatccttaaaaaccccatttccacccct	Protospacer
****.*********************.**************

106. spacer 3.2|3946150|41|NZ_CP045538|PILER-CR matches to NZ_MG764552 (Klebsiella pneumoniae strain A1763 plasmid pA1763-Ct2, complete sequence) position: , mismatch: 2, identity: 0.951

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctctcccctaaataatccttaaaaaccccatttccacccct	Protospacer
****.*********************.**************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

51872 : 113152

Salmonella_phage(32.5%)

integrase,head,terminase,tRNA,protease,plate,holin,portal,tail,lysis,capsid

attL 66737:66784|attR 96117:96164

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004246449.1\|51872_52376_-\|tRNA	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	NA	NA	NA	NA
WP_017628693.1\|52387_53554_-	nucleotide sugar dehydrogenase	M1I798	Paramecium_bursaria_Chlorella_virus	3.8e-118	56.9
WP_152964409.1\|53787_54735_-	NAD-dependent epimerase/dehydratase family protein	NA	NA	NA	NA
WP_152964410.1\|55724_56858_-	glycosyltransferase	NA	NA	NA	NA
WP_152964411.1\|56854_57262_-	hypothetical protein	NA	NA	NA	NA
WP_152964412.1\|57991_59119_-	glycosyltransferase	NA	NA	NA	NA
WP_152964413.1\|59085_60252_-	hypothetical protein	NA	NA	NA	NA
WP_152964414.1\|60229_61468_-	oligosaccharide flippase family protein	NA	NA	NA	NA
WP_152964415.1\|61480_61897_-	adenylyltransferase/cytidyltransferase family protein	A0A1V0SGE7	Hokovirus	6.9e-14	43.2
WP_152964416.1\|61893_63414_-	asparagine synthase	A0A1V0SGM7	Hokovirus	9.6e-29	31.1
WP_004249722.1\|63786_65178_-	envelope stress sensor histidine kinase CpxA	W8CYF6	Bacillus_phage	3.4e-20	27.3
WP_004246432.1\|65190_65889_-	envelope stress response regulator transcription factor CpxR	Q6XM27	Feldmannia_irregularis_virus	8.1e-07	31.1
WP_004249721.1\|66072_66639_+	periplasmic heavy metal sensor	NA	NA	NA	NA
66737:66784	attL	NA	NA	NA	NA
WP_113976860.1\|66934_67915_-\|integrase	tyrosine-type recombinase/integrase	A0A0M4RTQ0	Salmonella_phage	9.7e-115	62.9
WP_071233827.1\|67981_68275_-	helix-turn-helix transcriptional regulator	Q1JS37	Enterobacteria_phage	1.1e-26	59.8
WP_152964417.1\|68404_68677_+	hypothetical protein	Q1JS36	Enterobacteria_phage	1.6e-22	56.7
WP_049220106.1\|68678_68867_+	hypothetical protein	NA	NA	NA	NA
WP_152964418.1\|68863_69016_+	hypothetical protein	NA	NA	NA	NA
WP_152964419.1\|69032_69302_+	hypothetical protein	NA	NA	NA	NA
WP_113976858.1\|69351_69747_+	DUF5347 family protein	NA	NA	NA	NA
WP_152964420.1\|69764_70022_+	DUF2732 family protein	NA	NA	NA	NA
WP_012368208.1\|70014_70236_+	TraR/DksA family transcriptional regulator	F1BUS2	Erwinia_phage	2.6e-12	52.1
WP_152964421.1\|70237_71065_+	Dam family site-specific DNA-(adenine-N6)-methyltransferase	F1BUN1	Cronobacter_phage	3.0e-61	47.8
WP_036908532.1\|71064_71388_+	DUF5405 family protein	NA	NA	NA	NA
WP_152964422.1\|71387_73766_+	replication endonuclease	Q7Y4B8	Escherichia_virus	2.7e-163	47.2
WP_152964423.1\|73972_74653_+	hypothetical protein	V9IQL5	Stenotrophomonas_phage	1.4e-16	27.7
WP_152964424.1\|74723_75119_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_152964425.1\|75599_76628_-\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	2.1e-136	68.1
WP_087726283.1\|76627_78382_-\|terminase	terminase ATPase subunit family protein	A0A1S6KZW3	Salmonella_phage	1.8e-260	73.4
WP_152964426.1\|78554_79364_+\|capsid	GPO family capsid scaffolding protein	F1BUR1	Erwinia_phage	1.4e-66	48.8
WP_152964427.1\|79379_80525_+\|capsid	phage major capsid protein, P2 family	E5G6M6	Salmonella_phage	6.8e-128	67.3
WP_087726281.1\|80524_81193_+	hypothetical protein	F1BUQ7	Erwinia_phage	9.4e-45	46.6
WP_109397510.1\|81270_81726_+\|head	head completion/stabilization protein	E5E3S2	Burkholderia_phage	8.4e-29	45.9
WP_012368195.1\|81725_81932_+\|tail	tail protein X	K4PAW7	Burkholderia_phage	1.3e-16	52.9
WP_109397508.1\|81951_82266_+\|holin	holin	NA	NA	NA	NA
WP_168713134.1\|82252_82663_+	M15 family metallopeptidase	K4F776	Cronobacter_phage	8.6e-41	60.5
WP_152964429.1\|82659_83163_+\|lysis	lysis protein	NA	NA	NA	NA
WP_152964430.1\|83137_83575_+\|tail	phage tail protein	E5G6N3	Salmonella_phage	9.2e-33	48.6
WP_152964431.1\|83564_84200_+	phage virion morphogenesis protein	A0A0M4RCU1	Salmonella_phage	4.4e-28	35.3
WP_152964637.1\|84265_84892_+\|plate	phage baseplate assembly protein V	Q6K1H6	Salmonella_virus	5.9e-57	59.1
WP_036907670.1\|84888_85227_+\|plate	baseplate assembly protein	F1BUP4	Erwinia_phage	8.4e-26	49.5
WP_152964432.1\|85226_86135_+\|plate	baseplate assembly protein	A0A0F7LCQ9	Escherichia_phage	2.8e-108	66.6
WP_152964638.1\|86127_86739_+\|tail	phage tail protein I	F1BUP2	Erwinia_phage	6.5e-77	69.4
WP_152964433.1\|86728_88381_+\|tail	phage tail protein	A0A1S6KZZ8	Salmonella_phage	3.3e-59	46.1
WP_152964434.1\|88470_89643_+\|tail	phage tail protein	A0A1S6KZY7	Salmonella_phage	2.1e-164	70.6
WP_152964435.1\|89646_90162_+\|tail	phage major tail tube protein	E5G6P8	Salmonella_phage	2.5e-53	55.6
WP_152964436.1\|90181_90529_+\|tail	phage tail assembly protein	E5G6P9	Salmonella_phage	1.3e-18	54.5
WP_072070684.1\|90489_90663_+\|tail	GpE family phage tail protein	A0A2I8TV82	Erwinia_phage	5.6e-10	52.6
WP_152964437.1\|90655_93490_+\|tail	phage tail tape measure protein	A0A2H4JE61	uncultured_Caudovirales_phage	3.3e-99	38.3
WP_036907694.1\|93489_93954_+\|tail	phage tail protein	E5G6Q2	Salmonella_phage	3.3e-41	61.4
WP_152964438.1\|93953_95054_+	phage late control D family protein	E5G6Q3	Salmonella_phage	4.7e-110	54.7
WP_006536728.1\|95106_95325_+	hypothetical protein	Q53ZE7	Salmonella_virus	2.2e-19	70.3
WP_064505875.1\|95371_95575_-	hypothetical protein	A0A0R6PKG1	Moraxella_phage	6.6e-10	67.4
WP_081353461.1\|95760_95994_+	hypothetical protein	NA	NA	NA	NA
WP_163939956.1\|96229_97015_-	glycosyltransferase family 25 protein	A0A1V0SAA0	Catovirus	2.2e-05	25.7
96117:96164	attR	NA	NA	NA	NA
WP_036895948.1\|98445_99201_-	3-oxoacyl-ACP reductase FabG	NA	NA	NA	NA
WP_004246429.1\|99739_100717_+	6-phosphofructokinase	NA	NA	NA	NA
WP_004249900.1\|101010_102015_+	sulfate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_004249716.1\|102110_102881_-	triose-phosphate isomerase	NA	NA	NA	NA
WP_012368676.1\|102987_103623_-	YiiQ family protein	NA	NA	NA	NA
WP_112843197.1\|103734_104163_+	DUF805 domain-containing protein	NA	NA	NA	NA
WP_004249898.1\|104223_104970_-	ferredoxin--NADP(+) reductase	NA	NA	NA	NA
WP_004246423.1\|105308_106493_+	multidrug efflux MFS transporter EmrD	S4TR35	Salmonella_phage	2.0e-13	24.2
WP_004246422.1\|106602_108135_-	glycerol kinase GlpK	NA	NA	NA	NA
WP_004246421.1\|108177_108993_-	aquaporin	M1HJ75	Acanthocystis_turfacea_Chlorella_virus	2.9e-16	28.4
WP_012368679.1\|109289_109532_+	cell division protein ZapB	NA	NA	NA	NA
WP_004246419.1\|109625_110144_-	ribonuclease E activity regulator RraA	NA	NA	NA	NA
WP_020946557.1\|110252_111170_-	1,4-dihydroxy-2-naphthoate polyprenyltransferase	NA	NA	NA	NA
WP_004246417.1\|111268_112609_-	HslU--HslV peptidase ATPase subunit	A0A191ZC11	Erwinia_phage	8.7e-42	27.1
WP_004246416.1\|112621_113152_-\|protease	ATP-dependent protease subunit HslV	NA	NA	NA	NA

DBSCAN-SWA_2

347339 : 397112

Paramecium_bursaria_Chlorella_virus(12.5%)

tRNA,integrase,transposase

attL 343618:343634|attR 391110:391126

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
343618:343634	attL	NA	NA	NA	NA
WP_152964447.1\|347339_347756_-\|transposase	IS200/IS605 family transposase	A0A1S5RHE3	Helicobacter_phage	2.9e-44	64.8
WP_152964448.1\|347778_348987_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A1B0VCD8	Salmonella_phage	4.4e-186	80.3
WP_004249589.1\|349064_349943_-	U32 family peptidase	NA	NA	NA	NA
WP_004246211.1\|349957_350953_-	U32 family peptidase	NA	NA	NA	NA
WP_004249588.1\|351168_351702_+	SCP2 domain-containing protein	NA	NA	NA	NA
WP_020946636.1\|351695_352199_+	N-acetyltransferase	NA	NA	NA	NA
WP_036894069.1\|352215_352497_-	GIY-YIG nuclease family protein	Q06VJ4	Trichoplusia_ni_ascovirus	6.1e-14	47.2
WP_004246207.1\|352783_353035_+	DUF1471 domain-containing protein	NA	NA	NA	NA
WP_004246206.1\|353150_353591_+	hypothetical protein	NA	NA	NA	NA
WP_004246205.1\|353599_353977_-	hypothetical protein	NA	NA	NA	NA
WP_004246204.1\|354143_354353_-	hypothetical protein	NA	NA	NA	NA
WP_004246203.1\|354379_354844_-	anaerobic ribonucleoside-triphosphate reductase-activating protein	A0A2H5BH04	Vibrio_virus	5.0e-53	60.4
WP_004246202.1\|354848_356987_-	anaerobic ribonucleoside-triphosphate reductase	A0A2I7QNQ7	Vibrio_phage	1.6e-263	63.8
WP_017628758.1\|356976_357291_+	hypothetical protein	NA	NA	NA	NA
WP_004246200.1\|357332_357719_-	RidA family protein	NA	NA	NA	NA
WP_004246198.1\|358056_358515_-	aspartate carbamoyltransferase regulatory subunit	NA	NA	NA	NA
WP_004246197.1\|358528_359464_-	aspartate carbamoyltransferase	M1HWF9	Paramecium_bursaria_Chlorella_virus	2.9e-52	40.5
WP_004252960.1\|359456_359636_-	hypothetical protein	NA	NA	NA	NA
WP_004246195.1\|359815_360820_-	ornithine carbamoyltransferase	NA	NA	NA	NA
WP_004246194.1\|361001_361433_+	ribonuclease E inhibitor RraB	NA	NA	NA	NA
WP_152964449.1\|361529_362399_-	pirin family protein	NA	NA	NA	NA
WP_004246189.1\|362707_362875_-	YhfL family protein	NA	NA	NA	NA
WP_004249583.1\|363289_363799_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_004252953.1\|364199_367088_-\|tRNA	valine--tRNA ligase	A0A1V0SK04	Klosneuvirus	3.7e-146	37.8
WP_004246185.1\|367101_367551_-	DNA polymerase III subunit chi	NA	NA	NA	NA
WP_004246183.1\|367631_369140_-	leucyl aminopeptidase	Q6GYZ8	Mycoplasma_phage	8.3e-49	38.0
WP_004249580.1\|369426_370524_+	LPS export ABC transporter permease LptF	NA	NA	NA	NA
WP_004246180.1\|370523_371603_+	LPS export ABC transporter permease LptG	NA	NA	NA	NA
WP_168713135.1\|371691_372909_-	D-alanyl-D-alanine- carboxypeptidase/endopeptidase AmpH	NA	NA	NA	NA
WP_004915968.1\|374782_376048_+\|integrase	integrase arm-type DNA-binding domain-containing protein	Q7M297	Enterobacteria_phage	1.7e-87	42.2
WP_008913927.1\|376496_376781_+	hypothetical protein	NA	NA	NA	NA
WP_152964450.1\|377107_377692_+	antirestriction protein ArdA	A0A0A8WIV6	Clostridium_phage	1.1e-25	40.9
WP_152964451.1\|378363_379803_-	capsule assembly Wzi family protein	NA	NA	NA	NA
WP_152964452.1\|380733_380931_-	hypothetical protein	NA	NA	NA	NA
WP_152964453.1\|380954_381977_-	UDP-glucose 4-epimerase GalE	A0A2K9L1R4	Tupanvirus	1.1e-89	49.5
WP_113532875.1\|382085_382847_+\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	7.5e-14	33.9
WP_152964454.1\|382874_384953_-	polysaccharide biosynthesis tyrosine autokinase	NA	NA	NA	NA
WP_014657219.1\|384987_385416_-	protein-tyrosine-phosphatase	NA	NA	NA	NA
WP_152964455.1\|385421_386567_-	polysaccharide export protein Wza	NA	NA	NA	NA
WP_042117123.1\|386671_387433_-	glycosyltransferase family 2 protein	A0A1V0SAH6	Catovirus	2.6e-19	46.8
WP_152964456.1\|387436_388603_-	nucleotide sugar dehydrogenase	O41091	Paramecium_bursaria_Chlorella_virus	9.4e-117	55.8
WP_152964457.1\|388633_389482_-	glycosyltransferase	NA	NA	NA	NA
WP_152914939.1\|389481_390261_-	glycosyltransferase	NA	NA	NA	NA
WP_152914938.1\|390250_391384_-	glycosyltransferase	NA	NA	NA	NA
391110:391126	attR	NA	NA	NA	NA
WP_152914937.1\|391385_392261_-	glycosyltransferase	NA	NA	NA	NA
WP_163939957.1\|392260_393448_-	hypothetical protein	NA	NA	NA	NA
WP_163939958.1\|393425_394244_-	hypothetical protein	NA	NA	NA	NA
WP_152964286.1\|394298_395507_-\|transposase	IS4 family transposase	Q9E8P4	Bluetongue_virus	4.8e-233	98.8
WP_152964459.1\|396414_397112_-\|transposase	IS1 family transposase	A0A0U2RK18	Escherichia_phage	1.0e-62	48.5

DBSCAN-SWA_3

1126235 : 1138201

Mycobacterium_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004246075.1\|1126235_1127435_-	glycine betaine/L-proline ABC transporter ATP-binding protein ProV	G3M9Y6	Bacillus_virus	3.8e-28	37.6
WP_004247427.1\|1128043_1129012_-	class 1b ribonucleoside-diphosphate reductase subunit beta	R4TBI6	Mycobacterium_phage	3.5e-133	71.0
WP_075206322.1\|1129037_1131164_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	V9VI16	Lactococcus_phage	1.2e-205	51.3
WP_004246072.1\|1131192_1131597_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	R4JF54	Bacillus_phage	3.7e-12	38.5
WP_004246071.1\|1131608_1131833_-	glutaredoxin-like protein NrdH	V5UN81	Mycobacterium_phage	1.4e-13	47.9
WP_017827772.1\|1132114_1132588_+	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	NA	NA	NA
WP_004246068.1\|1132785_1132995_+	transcription antiterminator/RNA stability regulator CspE	A0A1W6JNX5	Morganella_phage	5.9e-22	74.2
WP_163939955.1\|1133178_1133319_-	hypothetical protein	NA	NA	NA	NA
WP_004246058.1\|1134064_1134439_-	fluoride efflux transporter CrcB	A0A2H4J148	uncultured_Caudovirales_phage	2.7e-25	52.0
WP_004246057.1\|1134454_1135420_-	lipoyl synthase	NA	NA	NA	NA
WP_004246056.1\|1135521_1136166_-	lipoyl(octanoyl) transferase LipB	NA	NA	NA	NA
WP_026090527.1\|1136527_1136791_-	YbeD family protein	NA	NA	NA	NA
WP_004246054.1\|1136989_1138201_-	D-alanyl-D-alanine carboxypeptidase DacA	B6DZZ7	Stx2-converting_phage	8.6e-105	49.1

DBSCAN-SWA_4

1337368 : 1416324

Bacillus_phage(17.65%)

plate,protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004244558.1\|1337368_1337683_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	1.5e-13	44.1
WP_004244559.1\|1337713_1340008_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.3e-170	42.9
WP_004244560.1\|1340127_1340346_-	translation initiation factor IF-1	NA	NA	NA	NA
WP_004247616.1\|1340665_1341358_-\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_112843271.1\|1341359_1343111_-	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	A0A2R8FG22	Brazilian_cedratvirus	3.0e-18	31.2
WP_020945408.1\|1343113_1344883_-	cysteine/glutathione ABC transporter permease/ATP-binding protein CydD	W8CYL7	Bacillus_phage	3.0e-21	23.5
WP_004252032.1\|1345024_1345984_-	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	3.4e-64	45.5
WP_004244566.1\|1346526_1347021_+	leucine-responsive transcriptional regulator Lrp	NA	NA	NA	NA
WP_152964533.1\|1347148_1350946_+	DNA translocase FtsK	A0A218M9A2	Mycobacterium_phage	1.7e-90	49.3
WP_004244569.1\|1351058_1351664_+	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA
WP_012367706.1\|1351674_1353024_+	replication-associated recombination protein A	G3MBE0	Bacillus_virus	1.8e-79	40.6
WP_004244571.1\|1353157_1354447_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	4.1e-97	46.2
WP_004252020.1\|1354626_1354959_-	hypothetical protein	NA	NA	NA	NA
WP_020945410.1\|1355357_1356407_+	ureidoglycolate dehydrogenase	NA	NA	NA	NA
WP_152964534.1\|1356479_1357385_-	hypothetical protein	NA	NA	NA	NA
WP_004244575.1\|1357744_1358485_-	pyruvate formate lyase 1-activating protein	A0A2P0VNQ0	Tetraselmis_virus	2.3e-20	27.0
WP_004244576.1\|1358592_1360875_-	formate C-acetyltransferase	A0A2P0VNR5	Tetraselmis_virus	1.0e-159	41.6
WP_004244577.1\|1360929_1361784_-	formate transporter FocA	NA	NA	NA	NA
WP_152964535.1\|1362453_1364211_-	30S ribosomal protein S12 methylthiotransferase accessory protein YcaO	NA	NA	NA	NA
WP_004244579.1\|1364438_1365476_+	L-asparaginase 2	NA	NA	NA	NA
WP_049221441.1\|1365550_1366825_-	filamentous hemagglutinin N-terminal domain-containing protein	NA	NA	NA	NA
WP_143474787.1\|1366961_1368392_-	MFS transporter	A0A0M3UL24	Mycobacterium_phage	1.2e-07	24.6
WP_004244582.1\|1368528_1369617_+	3-phosphoserine/phosphohydroxythreonine transaminase	M1Q1P2	Streptococcus_phage	5.7e-84	47.0
WP_004252010.1\|1369813_1371100_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_020945417.1\|1371388_1372066_+	(d)CMP kinase	NA	NA	NA	NA
WP_004244586.1\|1372247_1373921_+	30S ribosomal protein S1	NA	NA	NA	NA
WP_004244587.1\|1373985_1374273_+	integration host factor subunit beta	A7KV42	Bacillus_phage	8.4e-11	40.0
WP_143474786.1\|1374694_1377064_+	DNA internalization-related competence protein ComEC/Rec2	Q0H255	Geobacillus_phage	3.6e-22	29.7
WP_004244589.1\|1377100_1378846_+	lipid A ABC transporter ATP-binding protein/permease MsbA	W8CYL7	Bacillus_phage	8.4e-61	30.9
WP_004244590.1\|1378842_1379844_+	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA
WP_004247631.1\|1380339_1380555_+	cold shock domain-containing protein	NA	NA	NA	NA
WP_004244593.1\|1380969_1381149_+	hypothetical protein	NA	NA	NA	NA
WP_004244594.1\|1381153_1381915_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA
WP_046335153.1\|1382038_1382869_-	envelope biogenesis factor ElyC	NA	NA	NA	NA
WP_004244596.1\|1383248_1384022_+\|tRNA	tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM	NA	NA	NA	NA
WP_004244597.1\|1384031_1385354_+	chromosome partition protein MukF	NA	NA	NA	NA
WP_004247634.1\|1385334_1386066_+	chromosome partition protein MukE	NA	NA	NA	NA
WP_152964536.1\|1386062_1390520_+	chromosome partition protein MukB	NA	NA	NA	NA
WP_060554589.1\|1390801_1391455_-	type A chloramphenicol O-acetyltransferase	G3CFL0	Escherichia_phage	2.4e-101	79.9
WP_041701075.1\|1391860_1392574_+	acid phosphatase AphA	NA	NA	NA	NA
WP_112843276.1\|1392916_1394632_+	L,D-transpeptidase	NA	NA	NA	NA
WP_004244605.1\|1394963_1395512_+	YcbK family protein	NA	NA	NA	NA
WP_004247640.1\|1395561_1396212_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_004244607.1\|1396304_1396778_-	Hcp family type VI secretion system effector	NA	NA	NA	NA
WP_004244608.1\|1396868_1398605_-	type VI secretion protein	NA	NA	NA	NA
WP_004244609.1\|1398597_1399953_-	membrane protein	NA	NA	NA	NA
WP_004244610.1\|1399990_1403539_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_152964537.1\|1403541_1405005_-	type VI secretion system protein TssA	NA	NA	NA	NA
WP_004244612.1\|1405010_1405661_-	type VI secretion system-associated protein TagO	NA	NA	NA	NA
WP_004244614.1\|1405662_1406451_-	hypothetical protein	NA	NA	NA	NA
WP_152964538.1\|1406454_1409166_-	type VI secretion system ATPase TssH	K4FB40	Cronobacter_phage	1.4e-83	30.5
WP_004244617.1\|1409174_1409930_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_004247647.1\|1409922_1411281_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_004244619.1\|1411282_1411834_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_004247648.1\|1411835_1413104_-	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA
WP_004244621.1\|1413108_1414146_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_017628432.1\|1414109_1415885_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_004244624.1\|1415892_1416324_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA

DBSCAN-SWA_5

1495853 : 1532205

Pectobacterium_phage(24.32%)

integrase,head,terminase,tRNA,lysis

attL 1486331:1486344|attR 1506294:1506307

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1486331:1486344	attL	NA	NA	NA	NA
WP_060557151.1\|1495853_1497029_-\|integrase	site-specific integrase	A0A2D1GN00	Marinobacter_phage	5.5e-32	32.2
WP_152964545.1\|1497030_1497243_-	hypothetical protein	NA	NA	NA	NA
WP_164527448.1\|1497657_1497828_-	hypothetical protein	NA	NA	NA	NA
WP_004250516.1\|1497855_1498035_-	hypothetical protein	NA	NA	NA	NA
WP_074924453.1\|1498082_1498583_-	siphovirus Gp157 family protein	H9C156	Pectobacterium_phage	2.1e-41	56.4
WP_150452763.1\|1498582_1500550_-	hypothetical protein	H9C157	Pectobacterium_phage	1.0e-115	39.1
WP_004250523.1\|1500562_1500823_-	hypothetical protein	A0A1B1W282	Salmonella_phage	7.9e-08	45.3
WP_036908171.1\|1500822_1501155_-	hypothetical protein	H9C158	Pectobacterium_phage	2.1e-05	39.2
WP_074924455.1\|1501710_1502493_-	DUF4236 domain-containing protein	NA	NA	NA	NA
WP_074924456.1\|1502551_1503205_-	LexA family transcriptional regulator	A5VW98	Enterobacteria_phage	7.7e-76	67.0
WP_074924457.1\|1503286_1503472_+	hypothetical protein	H9C161	Pectobacterium_phage	5.1e-09	49.2
WP_074924458.1\|1503551_1504007_+\|tRNA	tRNA-(guanine-N1)-methyltransferase	H9C162	Pectobacterium_phage	3.8e-29	54.7
WP_004250533.1\|1504024_1504249_+	hypothetical protein	H9C163	Pectobacterium_phage	9.5e-18	55.4
WP_152964546.1\|1504250_1505081_+	replication protein	H9C164	Pectobacterium_phage	4.4e-36	59.3
WP_041701082.1\|1505070_1506489_+	AAA family ATPase	H9C165	Pectobacterium_phage	1.4e-170	61.2
1506294:1506307	attR	NA	NA	NA	NA
WP_049210194.1\|1506543_1506720_+	hypothetical protein	NA	NA	NA	NA
WP_046335187.1\|1506722_1506956_+	hypothetical protein	NA	NA	NA	NA
WP_004250545.1\|1506952_1507564_+	hypothetical protein	H2BDG4	Pseudomonas_virus	7.0e-47	48.0
WP_046335186.1\|1507609_1507948_+	hypothetical protein	H9C172	Pectobacterium_phage	8.7e-31	57.9
WP_152964547.1\|1508025_1508619_+	DUF1367 family protein	K7PKS6	Enterobacteria_phage	6.6e-58	55.3
WP_109910691.1\|1508630_1508942_+	DUF968 domain-containing protein	A0A1I9KFA7	Aeromonas_phage	2.6e-34	69.8
WP_109910690.1\|1508976_1509528_+	DUF1133 family protein	A0A0U2S606	Escherichia_phage	7.5e-32	44.9
WP_152964548.1\|1509643_1510276_-	hypothetical protein	NA	NA	NA	NA
WP_152964549.1\|1510396_1510558_-	hypothetical protein	NA	NA	NA	NA
WP_004250558.1\|1510867_1511137_+	hypothetical protein	A0A2H4FNF0	Salmonella_phage	3.3e-17	47.8
WP_104836572.1\|1511136_1511607_+	lysozyme	A0A1W6JNW4	Morganella_phage	2.9e-48	57.5
WP_109910688.1\|1511749_1512214_+\|lysis	lysis protein	A0A1P8DTG0	Proteus_phage	1.0e-45	76.0
WP_115353734.1\|1512801_1513812_+\|terminase	terminase small subunit	A0A0U2RXW9	Escherichia_phage	6.4e-37	36.1
WP_168713138.1\|1514019_1515624_+	TerL protein	A9YWZ6	Burkholderia_phage	2.1e-199	64.1
WP_088206688.1\|1515628_1517131_+	DUF1073 domain-containing protein	A0A2H4P6S9	Pseudomonas_phage	6.0e-100	42.0
WP_049197370.1\|1517168_1517882_+\|head	head protein	A0A2H5BG15	Pseudoalteromonas_phage	7.9e-34	35.6
WP_087726615.1\|1517878_1519138_+	DUF2213 domain-containing protein	Q6IWU4	Burkholderia_phage	1.2e-45	51.3
WP_049209851.1\|1519137_1519635_+	hypothetical protein	NA	NA	NA	NA
WP_004250578.1\|1519634_1520702_+	DUF2184 domain-containing protein	A0A088C493	Shewanella_sp._phage	1.1e-52	39.3
WP_109023906.1\|1520771_1521113_+	hypothetical protein	Q6IWU7	Burkholderia_phage	2.7e-08	35.5
WP_082151820.1\|1521115_1521547_+	DUF4054 domain-containing protein	Q6IWU8	Burkholderia_phage	1.5e-11	32.4
WP_049256452.1\|1521546_1522005_+	hypothetical protein	Q6IWU9	Burkholderia_phage	1.1e-12	39.6
WP_020945484.1\|1522004_1522376_+	hypothetical protein	NA	NA	NA	NA
WP_109910684.1\|1522362_1522878_+	hypothetical protein	NA	NA	NA	NA
WP_109927582.1\|1522886_1524374_+	DUF3383 domain-containing protein	A0A088C3U1	Shewanella_sp._phage	4.6e-84	38.3
WP_004250586.1\|1524384_1524837_+	hypothetical protein	I7ATP4	Escherichia_phage	5.8e-22	38.1
WP_004250588.1\|1524877_1525336_+	hypothetical protein	Q6IWV4	Burkholderia_phage	6.7e-26	48.5
WP_152964550.1\|1525419_1527714_+	hypothetical protein	A0A2H5BG44	Pseudoalteromonas_phage	6.1e-19	26.2
WP_109910682.1\|1527710_1528238_+	hypothetical protein	NA	NA	NA	NA
WP_109910681.1\|1528237_1528555_+	hypothetical protein	Q6IWP9	Burkholderia_phage	4.3e-08	32.3
WP_109910680.1\|1528520_1529336_+	hypothetical protein	A1Z005	Burkholderia_virus	2.4e-10	26.0
WP_109910679.1\|1529338_1530031_+	hypothetical protein	A1Z003	Burkholderia_virus	5.3e-35	39.4
WP_004250600.1\|1530027_1530372_+	hypothetical protein	NA	NA	NA	NA
WP_109910678.1\|1530364_1531552_+	hypothetical protein	Q6IWQ3	Burkholderia_phage	2.6e-69	40.6
WP_152964551.1\|1531548_1532205_+	DUF2612 domain-containing protein	Q6IWQ4	Burkholderia_phage	9.9e-39	40.3

DBSCAN-SWA_6

1617325 : 1667551

Enterobacteria_phage(29.41%)

integrase,terminase,tRNA,protease,portal,lysis,tail,transposase

attL 1617147:1617162|attR 1660987:1661002

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1617147:1617162	attL	NA	NA	NA	NA
WP_152964561.1\|1617325_1618429_-\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_004247118.1\|1618534_1618987_-	NUDIX hydrolase	NA	NA	NA	NA
WP_020945526.1\|1618979_1619609_-	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
WP_004247120.1\|1619747_1621001_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	1.6e-21	92.6
WP_036894692.1\|1621165_1622461_+	hypothetical protein	NA	NA	NA	NA
WP_152964562.1\|1622457_1623585_-\|integrase	tyrosine-type recombinase/integrase	O21925	Phage_21	8.8e-128	60.9
WP_110229340.1\|1623565_1623808_-	excisionase	NA	NA	NA	NA
WP_108717285.1\|1624064_1624712_-	helix-turn-helix domain-containing protein	H9C160	Pectobacterium_phage	3.7e-46	44.0
WP_063073918.1\|1625042_1626116_+	hypothetical protein	A0A2H4JEZ8	uncultured_Caudovirales_phage	6.4e-27	36.3
WP_129623633.1\|1626128_1626527_+	antitermination protein Q	B6SCZ7	Bacteriophage	1.3e-30	54.5
WP_012367807.1\|1626748_1627009_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_049202015.1\|1627163_1627421_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_004247850.1\|1627426_1627699_-	helix-turn-helix domain-containing protein	A0A2I7S995	Vibrio_phage	1.3e-16	67.2
WP_004247851.1\|1628005_1628212_+	hypothetical protein	NA	NA	NA	NA
WP_109372922.1\|1630241_1630436_+	hypothetical protein	NA	NA	NA	NA
WP_152964563.1\|1630509_1631532_+	site-specific DNA-methyltransferase	A0A1W6JP25	Morganella_phage	6.9e-132	70.1
WP_049210581.1\|1631781_1631979_-	hypothetical protein	NA	NA	NA	NA
WP_152964646.1\|1632124_1632388_+	hypothetical protein	A0A2H4FNF0	Salmonella_phage	1.6e-16	46.5
WP_063073925.1\|1632387_1632858_+	lysozyme	A0A1W6JNW4	Morganella_phage	4.0e-50	59.9
WP_063073926.1\|1633000_1633462_+\|lysis	lysis protein	A0A2H4JHL8	uncultured_Caudovirales_phage	5.5e-12	34.7
WP_063073927.1\|1633701_1634277_+	hypothetical protein	NA	NA	NA	NA
WP_063073928.1\|1634343_1634622_+	hypothetical protein	NA	NA	NA	NA
WP_004247866.1\|1635092_1635605_+	KilA-N domain-containing protein	A0A2H4FQV0	Salmonella_phage	1.1e-58	64.0
WP_126656776.1\|1635617_1636112_+	DUF1441 family protein	A0A291AWV8	Escherichia_phage	1.3e-48	65.6
WP_152964564.1\|1636108_1638211_+\|terminase	phage terminase large subunit family protein	A0A291AWY5	Escherichia_phage	1.7e-294	68.9
WP_004247869.1\|1638207_1638423_+	hypothetical protein	A5LH28	Enterobacteria_phage	1.2e-17	64.3
WP_152964565.1\|1638419_1639910_+\|portal	phage portal protein	K7PHM5	Enterobacterial_phage	1.5e-191	67.4
WP_152964566.1\|1639875_1641906_+\|protease	Clp protease ClpP	S5M7Q8	Escherichia_phage	1.4e-240	62.0
WP_152964567.1\|1641994_1642345_+	DUF2190 family protein	A5LH31	Enterobacteria_phage	5.3e-15	48.6
WP_152964568.1\|1642355_1642628_+	ATP-binding protein	K7PH43	Enterobacteria_phage	3.1e-15	44.9
WP_063073895.1\|1642637_1643201_+\|tail	phage tail protein	K7PMB7	Enterobacterial_phage	6.2e-50	57.1
WP_036973524.1\|1643200_1643596_+\|tail	phage tail protein	A0A2R9YJI2	Escherichia_phage	2.2e-41	59.5
WP_152964569.1\|1643607_1644129_+\|tail	phage tail protein	M9NYX0	Enterobacteria_phage	2.9e-65	74.7
WP_074561718.1\|1644140_1644530_+\|tail	phage minor tail protein G	K7PJY4	Enterobacterial_phage	3.1e-16	41.0
WP_152964570.1\|1644550_1644871_+\|tail	phage tail assembly protein T	K7PHE1	Enterobacteria_phage	3.3e-16	41.5
WP_152964571.1\|1644839_1647833_+\|tail	phage tail tape measure protein	E4WL33	Enterobacteria_phage	8.3e-109	31.5
WP_152964572.1\|1647833_1648163_+\|tail	phage tail protein	A0A0K2FIE9	Enterobacteria_phage	5.1e-28	55.0
WP_152964573.1\|1648183_1648477_+	hypothetical protein	NA	NA	NA	NA
WP_152964574.1\|1648523_1649228_+\|tail	phage minor tail protein L	A5LH40	Enterobacteria_phage	1.6e-66	51.1
WP_110229325.1\|1649249_1649978_+\|tail	phage tail protein	Q6H9T4	Enterobacteria_phage	2.3e-89	61.5
WP_080973411.1\|1649947_1650532_+\|tail	tail assembly protein	K7PH50	Enterobacteria_phage	3.1e-44	48.0
WP_152964575.1\|1650546_1653750_+	DUF1983 domain-containing protein	A0A0P0ZBW1	Stx2-converting_phage	1.9e-276	55.3
WP_049209900.1\|1653739_1654072_+	hypothetical protein	NA	NA	NA	NA
WP_152964576.1\|1654071_1654758_+	hypothetical protein	NA	NA	NA	NA
WP_004247891.1\|1654754_1655021_+	hypothetical protein	NA	NA	NA	NA
WP_152964577.1\|1655037_1655370_+	hypothetical protein	A0A1P8DTJ0	Proteus_phage	5.5e-22	60.8
WP_152964578.1\|1655359_1656634_+	hypothetical protein	A0A2H4PRH0	Proteus_phage	8.2e-98	52.8
WP_108717017.1\|1657440_1658070_-	TIGR02646 family protein	NA	NA	NA	NA
WP_108717016.1\|1658066_1659656_-	AAA family ATPase	C7BGE8	Burkholderia_phage	5.4e-14	34.5
WP_152964579.1\|1659636_1660599_-	RNA-directed DNA polymerase	NA	NA	NA	NA
WP_004247902.1\|1661092_1661257_+	isocitrate dehydrogenase	Q77Z09	Phage_21	1.6e-22	92.6
1660987:1661002	attR	NA	NA	NA	NA
WP_049221303.1\|1662091_1662409_+	hypothetical protein	NA	NA	NA	NA
WP_049221300.1\|1662481_1663642_+	hypothetical protein	NA	NA	NA	NA
WP_152964580.1\|1666390_1667551_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	1.2e-39	37.9

DBSCAN-SWA_7

1910464 : 1920456

Escherichia_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004242885.1\|1910464_1912522_-	potassium-transporting ATPase subunit KdpB	E4ZFI9	Streptococcus_phage	4.8e-31	26.1
WP_004248043.1\|1912533_1914234_-	potassium-transporting ATPase subunit KdpA	NA	NA	NA	NA
WP_004242887.1\|1914569_1915256_+	ankyrin repeat domain-containing protein	NA	NA	NA	NA
WP_004242888.1\|1915255_1915717_+	nucleoside deaminase	S4VYZ2	Pandoravirus	7.0e-15	34.6
WP_004242890.1\|1915769_1916381_-	Tat proofreading chaperone DmsD	A0A077SLS7	Escherichia_phage	7.3e-28	39.1
WP_004242891.1\|1916520_1917381_-	dimethyl sulfoxide reductase anchor subunit family protein	A0A077SK59	Escherichia_phage	3.7e-25	35.5
WP_004242892.1\|1917382_1918000_-	dimethylsulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	2.2e-72	58.6
WP_020945635.1\|1918011_1920456_-	molybdopterin-dependent oxidoreductase	A0A077SK27	Escherichia_phage	3.3e-220	50.4

DBSCAN-SWA_8

2444339 : 2461645

Burkholderia_phage(21.43%)

holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004243609.1\|2444339_2444957_+	dimethylsulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	1.3e-88	67.8
WP_152964242.1\|2444960_2445737_+	dimethyl sulfoxide reductase anchor subunit	A0A077SK59	Escherichia_phage	2.5e-41	39.4
WP_063108406.1\|2445852_2446395_-	DUF924 domain-containing protein	A0A1V0SIY0	Klosneuvirus	3.2e-19	34.7
WP_017628013.1\|2446963_2447143_+	GhoT/OrtT family toxin	NA	NA	NA	NA
WP_112843326.1\|2447298_2447721_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_112843325.1\|2447861_2448098_-	hypothetical protein	F1BUK2	Cronobacter_phage	1.4e-06	33.8
WP_004243615.1\|2449409_2450066_-	DUF2612 domain-containing protein	Q6IWQ4	Burkholderia_phage	2.3e-35	39.9
WP_049197274.1\|2450062_2451250_-	hypothetical protein	A0A2H5BG53	Pseudoalteromonas_phage	1.4e-72	37.9
WP_004243617.1\|2451242_2451587_-	hypothetical protein	NA	NA	NA	NA
WP_049197272.1\|2451583_2452276_-	hypothetical protein	A1Z003	Burkholderia_virus	1.6e-34	37.1
WP_004243622.1\|2452278_2453091_-	hypothetical protein	Q6IWQ0	Burkholderia_phage	9.0e-42	39.2
WP_004243623.1\|2453059_2453380_-	hypothetical protein	NA	NA	NA	NA
WP_004243624.1\|2453392_2453881_-	hypothetical protein	NA	NA	NA	NA
WP_112843323.1\|2453883_2456187_-	hypothetical protein	A0A2H5BG44	Pseudoalteromonas_phage	1.1e-15	23.3
WP_004243627.1\|2456269_2456728_-	hypothetical protein	Q6IWV4	Burkholderia_phage	1.9e-25	48.5
WP_004243628.1\|2456787_2457240_-	hypothetical protein	NA	NA	NA	NA
WP_020945912.1\|2457250_2458738_-	DUF3383 domain-containing protein	A0A088C3U1	Shewanella_sp._phage	1.4e-77	35.7
WP_012368090.1\|2458746_2459259_-	hypothetical protein	NA	NA	NA	NA
WP_112843322.1\|2459740_2460145_-	structural protein	A0A1B1IQT0	uncultured_Mediterranean_phage	3.5e-18	40.8
WP_004248367.1\|2460147_2460447_-\|holin	phage holin, lambda family	A0A1P8DTE4	Proteus_phage	1.9e-21	51.0
WP_112843321.1\|2460829_2461645_-	antitermination protein	M9NZB0	Enterobacteria_phage	2.1e-54	43.1

DBSCAN-SWA_9

2651408 : 2727598

Morganella_phage(19.23%)

integrase,head,tRNA,terminase,protease,tail,portal,lysis,transposase,capsid

attL 2660593:2660610|attR 2741255:2741272

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004248453.1\|2651408_2651939_-\|tRNA	tRNA adenosine(34) deaminase TadA	S4VYT2	Pandoravirus	1.4e-06	31.5
WP_004243886.1\|2652251_2652512_+	YfhL family 4Fe-4S dicluster ferredoxin	A0A1B1IWY9	uncultured_Mediterranean_phage	4.6e-16	47.7
WP_004243887.1\|2652541_2652922_-	holo-ACP synthase	NA	NA	NA	NA
WP_004243888.1\|2652921_2653653_-	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA
WP_004243889.1\|2653722_2654463_-	DNA repair protein RecO	NA	NA	NA	NA
WP_152964250.1\|2654475_2655384_-	GTPase Era	NA	NA	NA	NA
WP_004248457.1\|2655380_2656061_-	ribonuclease III	A0A0P0BX11	Ostreococcus_lucimarinus_virus	8.1e-20	31.9
WP_004248458.1\|2656256_2657228_-	signal peptidase I	NA	NA	NA	NA
WP_004243894.1\|2657242_2659039_-	elongation factor 4	A0A2K9L2P9	Tupanvirus	2.7e-22	41.2
WP_004243895.1\|2659360_2659825_-	SoxR-reducing system protein RseC	NA	NA	NA	NA
WP_004243896.1\|2659837_2660809_-	sigma-E factor regulatory protein RseB	NA	NA	NA	NA
2660593:2660610	attL	NA	NA	NA	NA
WP_004243897.1\|2660857_2661517_-	anti-sigma-E factor RseA	NA	NA	NA	NA
WP_004243899.1\|2661518_2662097_-	RNA polymerase sigma factor RpoE	NA	NA	NA	NA
WP_020945959.1\|2662397_2663156_-\|tRNA	tRNA1(Val) (adenine(37)-N6)-methyltransferase	NA	NA	NA	NA
WP_004248459.1\|2664931_2665315_-	autonomous glycyl radical cofactor GrcA	A0A088FS37	Shigella_phage	2.0e-31	67.0
WP_149127602.1\|2665326_2665551_+	hypothetical protein	NA	NA	NA	NA
WP_012368143.1\|2665649_2666330_+	uracil-DNA glycosylase	A0A076JX67	Equid_alphaherpesvirus	1.7e-57	47.2
WP_004243909.1\|2666421_2667033_-	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_004243910.1\|2667134_2668034_+	NAD(+) kinase	NA	NA	NA	NA
WP_004248462.1\|2668119_2669781_+	DNA repair protein RecN	NA	NA	NA	NA
WP_004243912.1\|2669894_2670257_+	outer membrane protein assembly factor BamE	NA	NA	NA	NA
WP_004243913.1\|2670389_2670683_-	RnfH family protein	NA	NA	NA	NA
WP_004243914.1\|2670675_2671110_-	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA
WP_004243915.1\|2671266_2671749_+	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	4.3e-31	49.4
WP_104836561.1\|2672535_2672910_+	hypothetical protein	NA	NA	NA	NA
WP_104836562.1\|2673300_2673606_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_152964251.1\|2673798_2675097_-	hypothetical protein	A0A1W6JNZ8	Morganella_phage	3.3e-54	31.1
WP_152964252.1\|2675170_2676184_-	hypothetical protein	NA	NA	NA	NA
WP_152964253.1\|2676173_2679911_-	DUF1983 domain-containing protein	Q7Y3Z3	Yersinia_phage	3.6e-186	48.1
WP_049210594.1\|2679911_2680310_-	hypothetical protein	A0A2H4IYI8	uncultured_Caudovirales_phage	4.1e-32	47.7
WP_152964254.1\|2680364_2680640_-	hypothetical protein	NA	NA	NA	NA
WP_152964255.1\|2680653_2681235_-	hypothetical protein	Q7Y3Z7	Yersinia_phage	8.4e-50	50.0
WP_152964256.1\|2681231_2681831_-	hypothetical protein	S4TSP7	Salmonella_phage	6.9e-55	55.4
WP_152964257.1\|2681831_2685134_-\|tail	phage tail tape measure protein	Q6UAW7	Klebsiella_phage	5.4e-194	44.3
WP_017827267.1\|2685390_2685741_-\|tail	phage tail protein	Q6UAW8	Klebsiella_phage	6.2e-16	40.5
WP_152964258.1\|2685740_2686217_-\|tail	phage tail protein	Q7Y403	Yersinia_phage	1.5e-57	75.5
WP_026164627.1\|2686239_2686632_-	hypothetical protein	Q7Y404	Yersinia_phage	1.2e-31	57.9
WP_017827270.1\|2686640_2687030_-	hypothetical protein	Q7Y405	Yersinia_phage	1.0e-30	50.0
WP_071233556.1\|2687016_2687343_-\|head	phage head closure protein	Q7Y406	Yersinia_phage	2.0e-16	45.8
WP_036901048.1\|2687342_2687648_-\|head,tail	phage gp6-like head-tail connector protein	A0A1W6JNZ5	Morganella_phage	1.9e-24	56.2
WP_071233557.1\|2687741_2688950_-\|capsid	phage major capsid protein	U5P0G9	Shigella_phage	2.2e-145	65.7
WP_036904957.1\|2688963_2689614_-\|head,protease	HK97 family phage prohead protease	Q8HAD3	Salmonella_phage	5.6e-95	80.0
WP_071233558.1\|2689585_2690815_-\|portal	phage portal protein	Q8W629	Enterobacteria_phage	2.9e-177	74.0
WP_049219082.1\|2690814_2690994_-	hypothetical protein	A0A1B5FP99	Escherichia_phage	1.2e-10	57.4
WP_152964259.1\|2691003_2692737_-\|terminase	terminase large subunit	A0A1P8DTK0	Proteus_phage	0.0e+00	95.9
WP_049218005.1\|2692740_2693211_-\|terminase	phage terminase small subunit P27 family	A0A1W6JP17	Morganella_phage	7.7e-70	81.4
WP_049218006.1\|2693358_2693556_-	hypothetical protein	A0A1P8DTB8	Proteus_phage	6.4e-26	87.7
WP_087741133.1\|2693552_2693903_-	HNH endonuclease	A0A1P8DTD1	Proteus_phage	2.4e-60	95.6
WP_087741132.1\|2693968_2694334_-	hypothetical protein	A0A1P8DTD7	Proteus_phage	3.3e-44	73.3
WP_049218009.1\|2694380_2694689_-	hypothetical protein	Q8HA83	Salmonella_phage	1.4e-32	65.7
WP_004250565.1\|2695199_2695661_-\|lysis	lysis protein	A0A2H4JHL8	uncultured_Caudovirales_phage	8.5e-13	34.0
WP_049257301.1\|2695803_2696274_-	lysozyme	A0A1W6JNW4	Morganella_phage	2.2e-48	57.5
WP_004250558.1\|2696273_2696543_-	hypothetical protein	A0A2H4FNF0	Salmonella_phage	3.3e-17	47.8
WP_129623577.1\|2696905_2697169_+	DUF1883 domain-containing protein	NA	NA	NA	NA
WP_152964260.1\|2697148_2697328_-	Rrf2 family transcriptional regulator	NA	NA	NA	NA
WP_152964261.1\|2697441_2698464_-	site-specific DNA-methyltransferase	A0A1W6JP25	Morganella_phage	1.8e-132	67.8
WP_152964262.1\|2698537_2698732_-	hypothetical protein	NA	NA	NA	NA
WP_060961278.1\|2698890_2699571_-	hypothetical protein	A0A1W6JP37	Morganella_phage	3.3e-53	50.5
WP_152964263.1\|2699598_2700624_-	DUF968 domain-containing protein	A0A1W6JP62	Morganella_phage	4.4e-86	48.0
WP_152964264.1\|2700620_2701424_-	KilA-N domain-containing protein	A0A1W6JP13	Morganella_phage	8.8e-90	63.1
WP_060961275.1\|2701442_2701829_-	RusA family crossover junction endodeoxyribonuclease	K7PH72	Enterobacteria_phage	2.4e-29	52.4
WP_152964265.1\|2701891_2702293_-	hypothetical protein	NA	NA	NA	NA
WP_152964629.1\|2702289_2702928_-	phage N-6-adenine-methyltransferase	A5LH72	Enterobacteria_phage	5.6e-79	63.6
WP_152964266.1\|2702924_2704046_-	replication protein 15	K7PLZ7	Enterobacterial_phage	5.2e-48	56.6
WP_036904897.1\|2704055_2704235_-	DUF4222 domain-containing protein	A0A1W6JP38	Morganella_phage	8.1e-12	56.9
WP_004251659.1\|2704231_2704405_-	hypothetical protein	NA	NA	NA	NA
WP_036900998.1\|2704492_2704951_-	hypothetical protein	K7PJS5	Enterobacterial_phage	6.0e-27	50.8
WP_036904893.1\|2705019_2705232_-	helix-turn-helix domain-containing protein	Q76H55	Enterobacteria_phage	6.6e-21	65.2
WP_152964267.1\|2705272_2705935_+	helix-turn-helix domain-containing protein	A0A1R3Y604	Salmonella_virus	3.3e-18	54.4
WP_036900991.1\|2706287_2706491_+	hypothetical protein	NA	NA	NA	NA
WP_074924366.1\|2706718_2707615_+	recombination-associated protein RdgC	A0A1W6JP69	Morganella_phage	1.7e-97	59.7
WP_017827302.1\|2708221_2708719_+	single-stranded DNA-binding protein	A0A220NRQ8	Escherichia_phage	7.4e-47	64.9
WP_152964630.1\|2708752_2708932_+	hypothetical protein	A0A1P8DTH9	Proteus_phage	6.8e-27	98.2
WP_152964268.1\|2708934_2709630_+	hypothetical protein	R9VWB9	Serratia_phage	4.4e-61	51.5
WP_064506363.1\|2709629_2710025_+	hypothetical protein	S4TTI6	Salmonella_phage	2.6e-26	53.2
WP_126656794.1\|2710249_2711431_+	DUF3596 domain-containing protein	I6PDJ1	Cronobacter_phage	4.8e-153	69.9
WP_152964269.1\|2711729_2712929_+\|integrase	tyrosine-type recombinase/integrase	A0A1V0E8G8	Vibrio_phage	2.2e-105	47.5
WP_152964270.1\|2713103_2714480_-	SH3 domain-containing protein	NA	NA	NA	NA
WP_152964271.1\|2714701_2716057_-	DUF927 domain-containing protein	NA	NA	NA	NA
WP_152964272.1\|2717701_2718610_-	DUF4435 domain-containing protein	NA	NA	NA	NA
WP_152964273.1\|2718612_2719902_-	AAA family ATPase	NA	NA	NA	NA
WP_152964274.1\|2720527_2720767_-	hypothetical protein	Q7M294	Enterobacteria_phage	1.7e-20	60.5
WP_152964275.1\|2722715_2722943_+	hypothetical protein	NA	NA	NA	NA
WP_152964276.1\|2723876_2724440_+	hypothetical protein	NA	NA	NA	NA
WP_152964277.1\|2726437_2727598_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	1.2e-39	37.9
2741255:2741272	attR	NA	NA	NA	NA

DBSCAN-SWA_10

2987897 : 3065507

106

Morganella_phage(30.16%)

integrase,terminase,tRNA,protease,holin,tail,lysis,capsid

attL 3002442:3002488|attR 3051458:3051504

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_152964300.1\|2987897_2990909_-\|tail	phage tail tape measure protein	A0A2H4P6I1	Salmonella_phage	2.4e-124	35.5
WP_152964301.1\|2990896_2991238_-	hypothetical protein	NA	NA	NA	NA
WP_152964302.1\|2991247_2991424_-	hypothetical protein	NA	NA	NA	NA
WP_152964303.1\|2991631_2992069_-	osmoprotectant transporter ProQ	A0A1W6JPI6	Morganella_phage	3.3e-14	60.3
WP_152964304.1\|2992388_2995136_-	DUF927 domain-containing protein	A0A1W6JPG0	Morganella_phage	4.8e-228	47.8
WP_036907517.1\|2995132_2995477_-	hypothetical protein	A0A1W6JPD8	Morganella_phage	3.7e-45	71.9
WP_152964305.1\|2995491_2996088_-	hypothetical protein	A0A286S1S7	Klebsiella_phage	4.9e-29	38.8
WP_049257504.1\|2996087_2996273_-	hypothetical protein	NA	NA	NA	NA
WP_162837557.1\|2996272_2996446_-	hypothetical protein	NA	NA	NA	NA
WP_046334701.1\|2996442_2997054_-	ORF6N domain-containing protein	A0A1B5FPC0	Escherichia_phage	3.3e-20	46.3
WP_036907509.1\|2997050_2997260_-	hypothetical protein	A0A1W6JPF1	Morganella_phage	4.7e-11	52.2
WP_152964306.1\|2997256_2997451_-	hypothetical protein	NA	NA	NA	NA
WP_151252795.1\|2997453_2997627_-	DUF4222 domain-containing protein	NA	NA	NA	NA
WP_152964632.1\|2997619_2998117_-	host cell division inhibitor Icd-like protein	A0A1W6JPK3	Morganella_phage	3.5e-44	65.2
WP_036907503.1\|2998667_2999261_-	antirepressor protein	A0A1W6JPH8	Morganella_phage	1.5e-81	76.1
WP_036918890.1\|2999273_2999669_-	hypothetical protein	A0A1W6JPH9	Morganella_phage	2.1e-28	56.9
WP_099432957.1\|2999668_2999887_-	AlpA family transcriptional regulator	A0A2H4J8C8	uncultured_Caudovirales_phage	6.6e-08	45.3
WP_099432956.1\|3000127_3000523_-	hypothetical protein	NA	NA	NA	NA
WP_152964307.1\|3000555_3000855_-	hypothetical protein	NA	NA	NA	NA
WP_064497271.1\|3001066_3002278_-\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	2.2e-129	56.0
3002442:3002488	attL	NA	NA	NA	NA
WP_152964308.1\|3002662_3002887_+	DNA polymerase III subunit theta	A0A1P8DTI0	Proteus_phage	8.8e-24	86.6
WP_152964309.1\|3002891_3004232_-	hypothetical protein	A0A1W6JNZ8	Morganella_phage	2.0e-54	31.1
WP_152964252.1\|3004305_3005319_-	hypothetical protein	NA	NA	NA	NA
WP_152964310.1\|3005308_3009487_-	DUF1983 domain-containing protein	A0A1W6JNW2	Morganella_phage	0.0e+00	75.8
WP_036935929.1\|3009486_3010053_-\|tail	tail assembly protein	A0A1W6JP03	Morganella_phage	1.4e-49	77.4
WP_152964311.1\|3009989_3010709_-\|tail	phage tail protein	A0A1W6JNU8	Morganella_phage	2.4e-110	74.0
WP_049199072.1\|3010712_3011411_-\|tail	phage minor tail protein L	A0A1W6JNT8	Morganella_phage	1.8e-115	83.6
WP_063109161.1\|3011407_3011737_-\|tail	phage tail protein	A0A1W6JNT2	Morganella_phage	7.3e-43	72.5
WP_036908263.1\|3011882_3012092_+	hypothetical protein	NA	NA	NA	NA
WP_036908264.1\|3012081_3012306_-	hypothetical protein	NA	NA	NA	NA
WP_152964312.1\|3012321_3015654_-	tape measure protein	A0A1W6JNU2	Morganella_phage	1.3e-214	47.2
WP_135024820.1\|3015718_3016027_-	hypothetical protein	NA	NA	NA	NA
WP_036908824.1\|3016149_3016944_-	hypothetical protein	A0A2I7RX10	Vibrio_phage	8.0e-43	42.7
WP_152964633.1\|3017021_3017591_-	hypothetical protein	H6WRU8	Salmonella_phage	2.0e-32	61.1
WP_135024822.1\|3017661_3017835_-	Arc family DNA-binding protein	NA	NA	NA	NA
WP_135024823.1\|3017990_3018311_+	Arc family DNA-binding protein	H6WRU6	Salmonella_phage	1.8e-14	75.5
WP_072502330.1\|3018366_3018870_-	hypothetical protein	NA	NA	NA	NA
WP_074924196.1\|3018907_3019756_-	hypothetical protein	NA	NA	NA	NA
WP_152964313.1\|3019998_3020691_-	hypothetical protein	A0A1W6JNX2	Morganella_phage	4.0e-91	72.4
WP_152964314.1\|3020740_3021496_-	DNA breaking-rejoining protein	A0A1W6JNT1	Morganella_phage	1.0e-92	68.9
WP_096043088.1\|3021560_3021929_-	hypothetical protein	F1C5E4	Cronobacter_phage	1.1e-10	30.3
WP_096043087.1\|3021925_3022297_-	hypothetical protein	G0ZNE3	Cronobacter_phage	1.1e-39	65.0
WP_004247766.1\|3022298_3022640_-	hypothetical protein	A0A1W6JNW7	Morganella_phage	9.4e-25	52.4
WP_096043086.1\|3022639_3023038_-	hypothetical protein	I6S619	Salmonella_phage	2.3e-54	78.6
WP_004247764.1\|3023094_3023268_-	hypothetical protein	I6R9A3	Salmonella_phage	1.4e-08	51.8
WP_152964315.1\|3023277_3024372_-	hypothetical protein	G0ZND9	Cronobacter_phage	2.0e-145	68.9
WP_152964316.1\|3024388_3024826_-	hypothetical protein	I6S1Q2	Salmonella_phage	6.5e-47	69.9
WP_152964317.1\|3024825_3026103_-	hypothetical protein	A0A1V0E5Q9	Salmonella_phage	1.4e-166	69.4
WP_152964318.1\|3026106_3027036_-\|capsid	minor capsid protein	A0A1V0E5Q2	Salmonella_phage	1.0e-89	55.7
WP_152964319.1\|3026986_3028342_-	DUF1073 domain-containing protein	H6WRT0	Salmonella_phage	1.7e-162	64.2
WP_152964320.1\|3028341_3029586_-\|terminase	PBSX family phage terminase large subunit	A0A1V0E5Q3	Salmonella_phage	1.6e-186	73.8
WP_152964321.1\|3029566_3029989_-	hypothetical protein	A0A068CGC1	Acinetobacter_phage	3.4e-32	63.0
WP_152964322.1\|3030005_3030191_-	hypothetical protein	A0A1W6JNV6	Morganella_phage	3.7e-20	70.5
WP_168713140.1\|3030180_3030342_-	hypothetical protein	NA	NA	NA	NA
WP_049257606.1\|3030384_3030648_-	hypothetical protein	NA	NA	NA	NA
WP_168713141.1\|3030678_3030837_-	hypothetical protein	NA	NA	NA	NA
WP_152964323.1\|3030853_3031636_-	DNA-binding protein	K7PH51	Enterobacterial_phage	1.9e-52	43.3
WP_152964324.1\|3032075_3032531_-\|lysis	lysis protein	A0A1P8DTG0	Proteus_phage	9.8e-54	84.7
WP_036905450.1\|3032527_3032932_-	structural protein	A0A2I7RXE2	Vibrio_phage	1.3e-25	50.0
WP_036906009.1\|3032928_3033225_-\|holin	holin	E7C9S8	Salmonella_phage	1.0e-19	45.4
WP_152964325.1\|3033734_3034574_-	antitermination protein	H6WRZ1	Salmonella_phage	2.0e-60	45.3
WP_152964326.1\|3034570_3034771_-	NinH	A5VW84	Enterobacteria_phage	6.1e-08	50.0
WP_152964327.1\|3034760_3035354_-	recombination protein NinG	A0A1P8DTE0	Proteus_phage	9.4e-89	87.3
WP_152964328.1\|3035325_3035469_-	hypothetical protein	A0A1P8DTE6	Proteus_phage	9.3e-19	91.5
WP_124743777.1\|3035465_3035825_-	hypothetical protein	NA	NA	NA	NA
WP_152964329.1\|3035845_3036289_-	recombination protein NinB	A0A1W6JNZ4	Morganella_phage	7.6e-43	62.4
WP_152964330.1\|3036456_3036648_-	hypothetical protein	NA	NA	NA	NA
WP_152964331.1\|3036858_3037104_-	DUF551 domain-containing protein	NA	NA	NA	NA
WP_152964332.1\|3037549_3037717_-	hypothetical protein	NA	NA	NA	NA
WP_152964333.1\|3037727_3037931_-	hypothetical protein	NA	NA	NA	NA
WP_152964634.1\|3037950_3039327_-	AAA family ATPase	E5AGF0	Erwinia_phage	5.4e-156	58.3
WP_152964635.1\|3039326_3040064_-	hypothetical protein	E5AGE9	Erwinia_phage	3.8e-63	55.9
WP_164484703.1\|3040491_3040668_-	hypothetical protein	NA	NA	NA	NA
WP_152964334.1\|3040764_3041106_-	transcriptional regulator	A0A1P8DTF0	Proteus_phage	9.3e-49	92.8
WP_036895075.1\|3041241_3041427_-	hypothetical protein	A4KWW0	Enterobacteria_phage	2.3e-09	58.3
WP_152964335.1\|3041522_3042233_+	helix-turn-helix domain-containing protein	A4KWV9	Enterobacteria_phage	3.3e-80	62.1
WP_004247718.1\|3042280_3043309_+	hypothetical protein	A4KWR9	Enterobacteria_phage	4.7e-96	53.7
WP_036970054.1\|3043704_3043974_+	hypothetical protein	A0A1P8DTK1	Proteus_phage	6.2e-24	72.5
WP_145930935.1\|3043989_3044478_-	hypothetical protein	NA	NA	NA	NA
WP_102086776.1\|3044986_3045262_+	hypothetical protein	NA	NA	NA	NA
WP_168713142.1\|3045258_3045411_+	hypothetical protein	NA	NA	NA	NA
WP_152964336.1\|3045407_3045728_+	hypothetical protein	NA	NA	NA	NA
WP_152964337.1\|3045729_3046614_+	AAA family ATPase	A0A1B1P9H8	Acinetobacter_phage	6.6e-62	52.4
WP_152964338.1\|3046603_3047107_+	single-stranded DNA-binding protein	A0A0A0P1Q9	Enterobacteria_phage	2.4e-53	84.3
WP_152964339.1\|3047197_3047518_+	hypothetical protein	NA	NA	NA	NA
WP_168713143.1\|3047517_3047691_+	hypothetical protein	NA	NA	NA	NA
WP_152964340.1\|3047690_3047984_+	hypothetical protein	NA	NA	NA	NA
WP_152964341.1\|3047993_3048362_+	hypothetical protein	NA	NA	NA	NA
WP_168713144.1\|3048748_3048922_+	hypothetical protein	NA	NA	NA	NA
WP_152964343.1\|3048914_3049256_+	DUF2591 family protein	A0A2I7QNI7	Vibrio_phage	1.4e-12	37.7
WP_152964344.1\|3049242_3049845_+	DNA methyltransferase	G8C7S6	Escherichia_phage	2.3e-58	56.7
WP_036976956.1\|3049852_3050047_+	hypothetical protein	A0A1P8DTH3	Proteus_phage	3.5e-29	92.2
WP_049206334.1\|3050280_3051438_+\|integrase	site-specific integrase	A0A0M4R586	Salmonella_phage	1.4e-176	75.1
WP_004244243.1\|3051726_3052599_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	5.7e-34	36.8
3051458:3051504	attR	NA	NA	NA	NA
WP_004244244.1\|3052602_3052815_+	ribosome-associated protein YbcJ	NA	NA	NA	NA
WP_004244246.1\|3053450_3054392_+	1-phosphofructokinase	NA	NA	NA	NA
WP_020946115.1\|3054457_3055849_-\|tRNA	cysteine--tRNA ligase	A0A2K9L6B7	Tupanvirus	2.7e-38	32.3
WP_004244249.1\|3056240_3056735_+	peptidylprolyl isomerase B	NA	NA	NA	NA
WP_020946116.1\|3056747_3057470_+	UDP-2,3-diacylglucosamine diphosphatase	NA	NA	NA	NA
WP_020946117.1\|3057602_3058124_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	NA	NA	NA
WP_041701236.1\|3058120_3059188_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
WP_004244255.1\|3059311_3060580_+	MFS transporter	NA	NA	NA	NA
WP_020946119.1\|3060657_3061683_+	mechanosensitive ion channel family protein	NA	NA	NA	NA
WP_004250298.1\|3061782_3064224_-	ABC transporter permease	NA	NA	NA	NA
WP_004250296.1\|3064220_3064907_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.6e-31	33.9
WP_012368271.1\|3064877_3065507_+\|protease	multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1	NA	NA	NA	NA

DBSCAN-SWA_11

3890436 : 3945281

Virus_Rctr41k(18.18%)

integrase,transposase,tRNA

attL 3910521:3910535|attR 3949604:3949618

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004246627.1\|3890436_3891465_+\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
WP_004246625.1\|3891505_3892180_-	6-N-hydroxylaminopurine resistance protein	NA	NA	NA	NA
WP_004249861.1\|3892297_3892921_-	superoxide dismutase [Mn]	Q56AR7	Bacillus_thuringiensis_phage	6.4e-64	58.5
WP_004249862.1\|3893288_3895247_+	acetate--CoA ligase	A0A2H4PQU7	Staphylococcus_phage	3.7e-89	39.1
WP_004246621.1\|3895411_3895723_+	DUF485 domain-containing protein	NA	NA	NA	NA
WP_004246620.1\|3895719_3897375_+	cation acetate symporter	NA	NA	NA	NA
WP_064506089.1\|3897676_3899308_+	phosphoethanolamine transferase	NA	NA	NA	NA
WP_152964391.1\|3899326_3900019_-	LUD domain-containing protein	NA	NA	NA	NA
WP_004246616.1\|3900022_3901441_-	iron-sulfur cluster-binding protein	NA	NA	NA	NA
WP_017628596.1\|3901431_3902169_-	(Fe-S)-binding protein	NA	NA	NA	NA
WP_004249867.1\|3908347_3909034_+	FadR family transcriptional regulator	NA	NA	NA	NA
WP_012368605.1\|3909114_3910512_+	multidrug transporter subunit MdtD	NA	NA	NA	NA
3910521:3910535	attL	NA	NA	NA	NA
WP_004246607.1\|3910593_3911520_-	ribokinase	NA	NA	NA	NA
WP_152964392.1\|3911800_3913300_+	ATPase RavA	A0A0N9PBE1	Sulfolobus_monocaudavirus	1.5e-21	37.3
WP_046335304.1\|3913307_3914765_+	ATPase RavA stimulator ViaA	NA	NA	NA	NA
WP_004246604.1\|3914765_3915758_-	aspartate--ammonia ligase	A0A1C9C5F0	Heterosigma_akashiwo_virus	1.3e-50	37.5
WP_004246603.1\|3915918_3916380_+	transcriptional regulator AsnC	NA	NA	NA	NA
WP_004249871.1\|3916480_3916921_+	FMN-binding protein MioC	NA	NA	NA	NA
WP_152964393.1\|3917300_3919199_+\|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	NA	NA	NA	NA
WP_004246599.1\|3919195_3919822_+	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA	NA	NA	NA
WP_004249988.1\|3920436_3920814_+	F0F1 ATP synthase subunit I	NA	NA	NA	NA
WP_004246597.1\|3920845_3921670_+	F0F1 ATP synthase subunit A	NA	NA	NA	NA
WP_004246596.1\|3921715_3921955_+	F0F1 ATP synthase subunit C	NA	NA	NA	NA
WP_004246595.1\|3922016_3922487_+	F0F1 ATP synthase subunit B	NA	NA	NA	NA
WP_004246594.1\|3922499_3923033_+	F0F1 ATP synthase subunit delta	NA	NA	NA	NA
WP_004246592.1\|3923047_3924589_+	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA
WP_004246591.1\|3924646_3925510_+	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA
WP_004246589.1\|3925544_3926927_+	F0F1 ATP synthase subunit beta	NA	NA	NA	NA
WP_004246588.1\|3926948_3927365_+	F0F1 ATP synthase subunit epsilon	NA	NA	NA	NA
WP_004246587.1\|3927515_3928889_+	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	A0A0N7G7P8	Chrysochromulina_ericina_virus	9.6e-28	32.3
WP_004246586.1\|3929046_3930873_+	glutamine--fructose-6-phosphate transaminase (isomerizing)	M1I9J5	Paramecium_bursaria_Chlorella_virus	1.2e-131	44.6
WP_001029679.1\|3931032_3931854_+\|transposase	heteromeric transposase endonuclease subunit TnsA	NA	NA	NA	NA
WP_000267723.1\|3931840_3933949_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_001276994.1\|3933945_3935613_+	AAA family ATPase	NA	NA	NA	NA
WP_001243518.1\|3935615_3937142_+\|transposase	transposase	NA	NA	NA	NA
WP_152964394.1\|3937396_3938564_+\|transposase	IS3 family transposase	Q716C2	Shigella_phage	6.7e-163	88.2
WP_001271300.1\|3940241_3940619_-	hypothetical protein	NA	NA	NA	NA
WP_000119696.1\|3941028_3941400_-	hypothetical protein	NA	NA	NA	NA
WP_001444089.1\|3941460_3941958_-	hypothetical protein	NA	NA	NA	NA
WP_001206315.1\|3942033_3942822_-	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1	NA	NA	NA	NA
WP_000704156.1\|3942879_3943404_-	streptothricin N-acetyltransferase Sat2	E4ZFP7	Streptococcus_phage	4.2e-16	38.9
WP_000777554.1\|3943498_3943972_-	trimethoprim-resistant dihydrofolate reductase DfrA1	A0A140HLG8	Bacillus_phage	1.6e-19	34.4
WP_000071896.1\|3944303_3944840_+\|integrase	class 2 integron integrase IntI2	A0A1P8DJJ6	Virus_Rctr41k	6.9e-14	34.4
WP_000497519.1\|3944954_3945281_+\|integrase	tyrosine-type recombinase/integrase	A0A1P8DJJ6	Virus_Rctr41k	2.1e-18	52.0
3949604:3949618	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP045540

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP045538

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection