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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP045018 Klebsiella pneumoniae subsp. pneumoniae strain BK13048 plasmid pBK13048-3, complete sequence 0 crisprs DEDDh 0 0 1 0
NZ_CP045020 Klebsiella pneumoniae subsp. pneumoniae strain BK13048 plasmid pBK13048-6, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP045022 Klebsiella pneumoniae subsp. pneumoniae strain BK13048 plasmid pBK13048-KPC14, complete sequence 0 crisprs NA 0 0 1 0
NZ_CP045017 Klebsiella pneumoniae subsp. pneumoniae strain BK13048 plasmid pBK13048-2, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP045021 Klebsiella pneumoniae subsp. pneumoniae strain BK13048 plasmid pBK13048-7, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP045015 Klebsiella pneumoniae subsp. pneumoniae strain BK13048 chromosome, complete genome 1 crisprs csa3,cas3,DEDDh,DinG,WYL 0 0 8 0
NZ_CP045016 Klebsiella pneumoniae subsp. pneumoniae strain BK13048 plasmid pBK13048-1, complete sequence 0 crisprs DEDDh 0 0 1 0
NZ_CP045019 Klebsiella pneumoniae subsp. pneumoniae strain BK13048 plasmid pBK13048-5, complete sequence 0 crisprs NA 0 0 1 0

Results visualization

1. NZ_CP045018
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 51534 57 Klebsiella_phage(85.71%) terminase,tail,capsid,head,portal NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP045016
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 28378 : 46251 19 Escherichia_phage(37.5%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. NZ_CP045022
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 8059 9 Burkholderia_phage(50.0%) transposase,integrase attL 2184:2201|attR 8776:8793
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
4. NZ_CP045019
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 9246 9 Escherichia_phage(57.14%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
5. NZ_CP045015
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP045015_1 4383276-4383370 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1604292 : 1611197 6 Planktothrix_phage(33.33%) NA NA
DBSCAN-SWA_2 1725615 : 1768259 61 Klebsiella_phage(47.17%) capsid,tail,portal,protease,head,integrase,holin,terminase attL 1725441:1725500|attR 1763257:1763321
DBSCAN-SWA_3 2615310 : 2626198 10 Escherichia_phage(87.5%) NA NA
DBSCAN-SWA_4 2897245 : 2918500 29 Pseudomonas_phage(27.27%) holin,tail,terminase NA
DBSCAN-SWA_5 2922932 : 2938564 23 Salmonella_phage(47.37%) integrase attL 2921690:2921703|attR 2938853:2938866
DBSCAN-SWA_6 3057936 : 3104074 56 Enterobacteria_phage(54.55%) capsid,tail,portal,plate,head,integrase,terminase,tRNA attL 3063164:3063181|attR 3100340:3100357
DBSCAN-SWA_7 3366392 : 3375866 8 Brazilian_cedratvirus(16.67%) protease,tRNA NA
DBSCAN-SWA_8 3858264 : 3909648 75 Cronobacter_phage(27.08%) lysis,head,integrase,terminase,tRNA attL 3857747:3857793|attR 3906719:3906765
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage