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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP040267 Escherichia coli strain 631 plasmid pEc631_4, complete sequence 0 crisprs csa3 0 0 0 0
NZ_CP040263 Escherichia coli strain 631 chromosome, complete genome 5 crisprs csa3,PD-DExK,WYL,RT,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,cas14j,DinG 0 20 13 0
NZ_CP040268 Escherichia coli strain 631 plasmid pEc631_5, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP040264 Escherichia coli strain 631 plasmid pEc631_1, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP040265 Escherichia coli strain 631 plasmid pEc631_2, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP040266 Escherichia coli strain 631 plasmid pEc631_3, complete sequence 0 crisprs cas2 0 0 0 0

Results visualization

1. NZ_CP040263
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP040263_1 1130245-1131005 Orphan I-E
12 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP040263_2 1158143-1158781 TypeI-E I-E
10 spacers
cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP040263_3 1618263-1618358 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP040263_4 2445068-2445191 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP040263_5 3141915-3142006 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP040263_1 1.1|1130274|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1130274-1130305 32 NZ_CP048306 Escherichia coli strain 9 plasmid p009_B, complete sequence 85745-85776 0 1.0
NZ_CP040263_2 2.2|1158233|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1158233-1158264 32 LC542972 Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence 246388-246419 0 1.0
NZ_CP040263_2 2.3|1158294|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1158294-1158325 32 LC542972 Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence 246449-246480 0 1.0
NZ_CP040263_2 2.4|1158355|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1158355-1158386 32 LC542972 Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence 246510-246541 0 1.0
NZ_CP040263_2 2.5|1158416|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1158416-1158447 32 LC542972 Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence 246571-246602 0 1.0
NZ_CP040263_2 2.6|1158477|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1158477-1158508 32 LC542972 Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence 246632-246663 0 1.0
NZ_CP040263_2 2.7|1158538|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1158538-1158569 32 LC542972 Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence 246693-246724 0 1.0
NZ_CP040263_2 2.8|1158599|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1158599-1158630 32 LC542972 Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence 246754-246785 0 1.0
NZ_CP040263_2 2.9|1158660|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1158660-1158691 32 LC542972 Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence 246815-246846 0 1.0
NZ_CP040263_2 2.10|1158721|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1158721-1158752 32 LC542972 Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence 246876-246907 0 1.0
NZ_CP040263_1 1.1|1130274|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1130274-1130305 32 NZ_CP025883 Escherichia coli strain 503440 plasmid p503440_100, complete sequence 74209-74240 1 0.969
NZ_CP040263_1 1.1|1130274|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1130274-1130305 32 NZ_CP025894 Escherichia coli strain 503025 plasmid p503025_100, complete sequence 77020-77051 1 0.969
NZ_CP040263_1 1.1|1130274|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1130274-1130305 32 NZ_CP025868 Escherichia coli strain 504211 plasmid p504211_100, complete sequence 18988-19019 1 0.969
NZ_CP040263_1 1.1|1130274|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1130274-1130305 32 CP043018 Escherichia coli strain 388808_gen plasmid unnamed3, complete sequence 7820-7851 1 0.969
NZ_CP040263_1 1.1|1130274|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1130274-1130305 32 NZ_CP023851 Escherichia coli strain 4/0 plasmid p4_0.2, complete sequence 85863-85894 1 0.969
NZ_CP040263_1 1.1|1130274|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1130274-1130305 32 NZ_AP017612 Escherichia coli strain 20Ec-P-124 plasmid pMRY16-002_2, complete sequence 84770-84801 1 0.969
NZ_CP040263_1 1.1|1130274|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1130274-1130305 32 NZ_CP025870 Escherichia coli strain 503829 plasmid p503829_100, complete sequence 91177-91208 1 0.969
NZ_CP040263_1 1.1|1130274|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1130274-1130305 32 NZ_CP028430 Escherichia coli strain RM9131 plasmid pRM9131-1, complete sequence 36203-36234 1 0.969
NZ_CP040263_1 1.1|1130274|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1130274-1130305 32 NZ_CP053233 Escherichia coli strain SCU-306 plasmid pSCU-306-2, complete sequence 88329-88360 1 0.969
NZ_CP040263_1 1.1|1130274|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1130274-1130305 32 NZ_CP019013 Escherichia coli strain Ecol_AZ162 plasmid pECAZ162_2, complete sequence 33813-33844 1 0.969
NZ_CP040263_1 1.1|1130274|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1130274-1130305 32 CP025897 Escherichia coli strain 500465 plasmid p500465_152, complete sequence 147147-147178 1 0.969
NZ_CP040263_1 1.1|1130274|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1130274-1130305 32 NZ_CP019027 Escherichia coli strain Ecol_881 plasmid pEC881_2, complete sequence 57925-57956 1 0.969
NZ_CP040263_1 1.1|1130274|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1130274-1130305 32 NZ_CP019002 Escherichia coli strain Ecol_AZ155 plasmid pECAZ155_2, complete sequence 69838-69869 1 0.969
NZ_CP040263_1 1.1|1130274|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1130274-1130305 32 NZ_CP028433 Escherichia coli strain RM9975 plasmid pRM9975-1, complete sequence 94312-94343 1 0.969
NZ_CP040263_1 1.1|1130274|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1130274-1130305 32 NZ_CP012114 Escherichia coli strain PSUO78 plasmid pPSUO78_2, complete sequence 89288-89319 1 0.969
NZ_CP040263_1 1.1|1130274|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1130274-1130305 32 MK972693 Salmonella phage SI23, complete genome 20077-20108 1 0.969
NZ_CP040263_1 1.1|1130274|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1130274-1130305 32 MK770415 Salmonella phage SF11, complete genome 1521-1552 1 0.969
NZ_CP040263_1 1.1|1130274|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1130274-1130305 32 MK972694 Salmonella phage SE22, complete genome 41165-41196 1 0.969
NZ_CP040263_1 1.1|1130274|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1130274-1130305 32 MK770414 Salmonella phage SE16, complete genome 5417-5448 1 0.969
NZ_CP040263_1 1.1|1130274|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1130274-1130305 32 MK972686 Salmonella phage SF3, complete genome 24871-24902 1 0.969
NZ_CP040263_1 1.1|1130274|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1130274-1130305 32 MK972685 Salmonella phage SE10, complete genome 26090-26121 1 0.969
NZ_CP040263_1 1.1|1130274|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1130274-1130305 32 MK972687 Salmonella phage SE1 (in:P22virus), complete genome 16364-16395 1 0.969
NZ_CP040263_1 1.1|1130274|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1130274-1130305 32 MT740315 Escherichia phage JEP4, complete genome 24063-24094 1 0.969
NZ_CP040263_1 1.1|1130274|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1130274-1130305 32 MK972692 Salmonella phage SE21, complete genome 40301-40332 1 0.969
NZ_CP040263_1 1.1|1130274|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1130274-1130305 32 MF356679 Escherichia phage D6, complete genome 78029-78060 1 0.969
NZ_CP040263_3 3.1|1618293|36|NZ_CP040263|CRISPRCasFinder 1618293-1618328 36 NC_016160 Escherichia phage HK75, complete genome 28586-28621 1 0.972
NZ_CP040263_3 3.1|1618293|36|NZ_CP040263|CRISPRCasFinder 1618293-1618328 36 NC_019705 Enterobacteria phage mEpX2, complete genome 29040-29075 1 0.972
NZ_CP040263_3 3.1|1618293|36|NZ_CP040263|CRISPRCasFinder 1618293-1618328 36 NC_019769 Enterobacteria phage HK542, complete genome 29169-29204 1 0.972
NZ_CP040263_3 3.1|1618293|36|NZ_CP040263|CRISPRCasFinder 1618293-1618328 36 NC_019719 Enterobacteria phage HK633, complete genome 31734-31769 1 0.972
NZ_CP040263_3 3.1|1618293|36|NZ_CP040263|CRISPRCasFinder 1618293-1618328 36 JF974339 Enterobacteria phage IME10, complete genome 9717-9752 1 0.972
NZ_CP040263_5 5.1|3141941|40|NZ_CP040263|CRISPRCasFinder 3141941-3141980 40 NZ_CP041417 Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence 47951-47990 1 0.975
NZ_CP040263_1 1.11|1130884|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1130884-1130915 32 KT898133 Aeromonas phage phiARM81ld, complete genome 45655-45686 2 0.938
NZ_CP040263_3 3.1|1618293|36|NZ_CP040263|CRISPRCasFinder 1618293-1618328 36 NC_019715 Enterobacterial phage mEp234, complete genome 30402-30437 2 0.944
NZ_CP040263_3 3.1|1618293|36|NZ_CP040263|CRISPRCasFinder 1618293-1618328 36 NC_019768 Enterobacteria phage HK106, complete genome 32698-32733 2 0.944
NZ_CP040263_3 3.1|1618293|36|NZ_CP040263|CRISPRCasFinder 1618293-1618328 36 NC_019711 Enterobacteria phage HK629, complete genome 37163-37198 2 0.944
NZ_CP040263_3 3.1|1618293|36|NZ_CP040263|CRISPRCasFinder 1618293-1618328 36 KY979108 Escherichia phage ECP1, complete genome 421-456 2 0.944
NZ_CP040263_3 3.1|1618293|36|NZ_CP040263|CRISPRCasFinder 1618293-1618328 36 NC_005344 Enterobacteria phage Sf6, complete genome 28404-28439 2 0.944
NZ_CP040263_4 4.1|2445111|38|NZ_CP040263|CRISPRCasFinder 2445111-2445148 38 NZ_CP043437 Enterobacter sp. LU1 plasmid unnamed 113727-113764 2 0.947
NZ_CP040263_2 2.5|1158416|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1158416-1158447 32 MN855767 Bacteriophage sp. isolate 11, complete genome 31880-31911 5 0.844
NZ_CP040263_3 3.1|1618293|36|NZ_CP040263|CRISPRCasFinder 1618293-1618328 36 MN855766 Bacteriophage sp. isolate 10, complete genome 5830-5865 5 0.861
NZ_CP040263_1 1.2|1130335|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1130335-1130366 32 NZ_CP006570 Sodalis praecaptivus strain HS1 plasmid pHS1, complete sequence 200247-200278 6 0.812
NZ_CP040263_2 2.7|1158538|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1158538-1158569 32 NC_013855 Azospirillum sp. B510 plasmid pAB510a, complete sequence 100800-100831 6 0.812
NZ_CP040263_2 2.9|1158660|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1158660-1158691 32 NZ_CP045381 Labrenzia sp. THAF35 plasmid pTHAF35_a, complete sequence 394835-394866 6 0.812
NZ_CP040263_2 2.9|1158660|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1158660-1158691 32 NZ_CP019631 Labrenzia aggregata strain RMAR6-6 plasmid unnamed1, complete sequence 62722-62753 6 0.812
NZ_CP040263_1 1.2|1130335|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1130335-1130366 32 NZ_CP047145 Streptomyces sp. HF10 plasmid plas1, complete sequence 69691-69722 7 0.781
NZ_CP040263_2 2.2|1158233|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1158233-1158264 32 NZ_CP036405 Komagataeibacter saccharivorans strain JH1 plasmid p221732, complete sequence 83754-83785 7 0.781
NZ_CP040263_2 2.2|1158233|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1158233-1158264 32 NZ_CP023037 Komagataeibacter saccharivorans strain CV1 plasmid unnamed1, complete sequence 128632-128663 7 0.781
NZ_CP040263_2 2.5|1158416|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1158416-1158447 32 NZ_AP017656 Sphingobium cloacae strain JCM 10874 plasmid pSCLO_2, complete sequence 103191-103222 7 0.781
NZ_CP040263_2 2.9|1158660|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1158660-1158691 32 NZ_CP050254 Orbus sp. IPMB12 plasmid pIPMB12, complete sequence 17842-17873 7 0.781
NZ_CP040263_1 1.1|1130274|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1130274-1130305 32 MK820013 Vibrio phage vB_VpaP_MGD2, complete genome 24310-24341 8 0.75
NZ_CP040263_1 1.2|1130335|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1130335-1130366 32 NZ_AP017656 Sphingobium cloacae strain JCM 10874 plasmid pSCLO_2, complete sequence 234032-234063 8 0.75
NZ_CP040263_1 1.2|1130335|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1130335-1130366 32 NZ_CP011450 Sphingomonas sanxanigenens DSM 19645 = NX02 plasmid pNXO2, complete sequence 59722-59753 8 0.75
NZ_CP040263_1 1.9|1130762|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1130762-1130793 32 MN855880 Siphoviridae sp. isolate 369, complete genome 5249-5280 8 0.75
NZ_CP040263_1 1.11|1130884|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1130884-1130915 32 MN901520 Halorubrum coriense virus Hardycor2, complete genome 16524-16555 8 0.75
NZ_CP040263_2 2.1|1158172|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1158172-1158203 32 MG925351 Mycobacterium phage MPlant7149, complete genome 32515-32546 8 0.75
NZ_CP040263_2 2.7|1158538|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1158538-1158569 32 NZ_CP016821 Rhodococcus sp. p52 plasmid pDF01, complete sequence 123752-123783 8 0.75
NZ_CP040263_2 2.7|1158538|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1158538-1158569 32 NZ_CP016821 Rhodococcus sp. p52 plasmid pDF01, complete sequence 136491-136522 8 0.75
NZ_CP040263_1 1.2|1130335|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1130335-1130366 32 NZ_CP011515 Mitsuaria sp. 7 plasmid, complete sequence 162356-162387 9 0.719
NZ_CP040263_1 1.9|1130762|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1130762-1130793 32 NZ_CP016463 Bosea sp. RAC05 plasmid pBSY19_1, complete sequence 542861-542892 9 0.719
NZ_CP040263_2 2.2|1158233|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1158233-1158264 32 NZ_AP022593 Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence 2552746-2552777 9 0.719
NZ_CP040263_2 2.6|1158477|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1158477-1158508 32 NZ_CP020900 Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRphaBra5d, complete sequence 178777-178808 9 0.719
NZ_CP040263_2 2.6|1158477|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1158477-1158508 32 NZ_CP013589 Rhizobium phaseoli strain N161 plasmid pRphaN161d, complete sequence 251306-251337 9 0.719
NZ_CP040263_2 2.6|1158477|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1158477-1158508 32 NZ_CP013562 Rhizobium phaseoli strain N841 plasmid pRphaN841e, complete sequence 256809-256840 9 0.719
NZ_CP040263_2 2.6|1158477|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1158477-1158508 32 NZ_CP013536 Rhizobium phaseoli strain R650 plasmid pRphaR650d, complete sequence 653047-653078 9 0.719
NZ_CP040263_2 2.6|1158477|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1158477-1158508 32 NZ_CP013546 Rhizobium phaseoli strain R620 plasmid pRphaR620d, complete sequence 259879-259910 9 0.719
NZ_CP040263_2 2.6|1158477|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1158477-1158508 32 NC_010997 Rhizobium etli CIAT 652 plasmid pC, complete sequence 248019-248050 9 0.719
NZ_CP040263_1 1.2|1130335|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1130335-1130366 32 MN850587 Escherichia phage mistaenkt, complete genome 62540-62571 10 0.688
NZ_CP040263_1 1.2|1130335|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1130335-1130366 32 MH791400 UNVERIFIED: Escherichia phage EcSzw-2, complete genome 63164-63195 10 0.688
NZ_CP040263_1 1.2|1130335|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1130335-1130366 32 MK562504 Enterobacteria phage CHB7, complete genome 51394-51425 10 0.688
NZ_CP040263_1 1.2|1130335|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1130335-1130366 32 NC_028808 Escherichia phage SUSP1, complete genome 60791-60822 10 0.688
NZ_CP040263_1 1.2|1130335|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1130335-1130366 32 MH791413 UNVERIFIED: Escherichia phage EcSzw_1, complete genome 62597-62628 10 0.688
NZ_CP040263_1 1.2|1130335|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1130335-1130366 32 NC_028935 Escherichia phage SUSP2, complete genome 58756-58787 10 0.688
NZ_CP040263_1 1.3|1130396|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1130396-1130427 32 MN693290 Marine virus AFVG_25M557, complete genome 19244-19275 10 0.688
NZ_CP040263_1 1.3|1130396|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1130396-1130427 32 MN693243 Marine virus AFVG_25M556, complete genome 14971-15002 10 0.688
NZ_CP040263_1 1.6|1130579|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1130579-1130610 32 NZ_CP022775 Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence 1222563-1222594 10 0.688
NZ_CP040263_1 1.6|1130579|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1130579-1130610 32 NZ_CP022762 Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence 1140926-1140957 10 0.688
NZ_CP040263_1 1.6|1130579|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1130579-1130610 32 NZ_CP023017 Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence 1200643-1200674 10 0.688
NZ_CP040263_1 1.6|1130579|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1130579-1130610 32 NZ_CP014703 Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence 1140023-1140054 10 0.688
NZ_CP040263_1 1.6|1130579|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1130579-1130610 32 NZ_CP022771 Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence 1140918-1140949 10 0.688
NZ_CP040263_1 1.6|1130579|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1130579-1130610 32 NZ_CP022777 Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence 1140274-1140305 10 0.688
NZ_CP040263_1 1.6|1130579|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1130579-1130610 32 NZ_CP022799 Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence 1140909-1140940 10 0.688
NZ_CP040263_1 1.6|1130579|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1130579-1130610 32 NZ_CP022764 Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence 1222678-1222709 10 0.688
NZ_CP040263_1 1.6|1130579|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1130579-1130610 32 NZ_CP022797 Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence 1222662-1222693 10 0.688
NZ_CP040263_1 1.6|1130579|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1130579-1130610 32 NZ_CP022758 Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence 1222655-1222686 10 0.688
NZ_CP040263_1 1.8|1130701|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1130701-1130732 32 MN657072 Psychrobacter sp. strain ANT_P36 plasmid pA36P2, complete sequence 2874-2905 10 0.688
NZ_CP040263_1 1.9|1130762|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1130762-1130793 32 NC_010625 Paraburkholderia phymatum STM815 plasmid pBPHY01, complete sequence 1903726-1903757 10 0.688
NZ_CP040263_2 2.9|1158660|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1158660-1158691 32 NC_013449 Streptomyces sp. W9 plasmid pCQ3, complete sequence 5026-5057 11 0.656
NZ_CP040263_2 2.9|1158660|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT 1158660-1158691 32 NC_019307 Streptomyces sp. W75 plasmid pCQ4, complete sequence 11401-11432 11 0.656

1. spacer 1.1|1130274|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP048306 (Escherichia coli strain 9 plasmid p009_B, complete sequence) position: , mismatch: 0, identity: 1.0

tttgctgagtgtgcatacacacttgaacatca	CRISPR spacer
tttgctgagtgtgcatacacacttgaacatca	Protospacer
********************************

2. spacer 2.2|1158233|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

attttcgcagcgggtaaccgcgcccggcgatc	CRISPR spacer
attttcgcagcgggtaaccgcgcccggcgatc	Protospacer
********************************

3. spacer 2.3|1158294|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

tttatgtggagtatcagtgcctgggtggaaag	CRISPR spacer
tttatgtggagtatcagtgcctgggtggaaag	Protospacer
********************************

4. spacer 2.4|1158355|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

tggggctgagcatggctaaacaaccgaggcgc	CRISPR spacer
tggggctgagcatggctaaacaaccgaggcgc	Protospacer
********************************

5. spacer 2.5|1158416|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

gtcaactggcaccacaggatgatggcggcgaa	CRISPR spacer
gtcaactggcaccacaggatgatggcggcgaa	Protospacer
********************************

6. spacer 2.6|1158477|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

caggcgctcgacgcggcacgcagtcgggcaca	CRISPR spacer
caggcgctcgacgcggcacgcagtcgggcaca	Protospacer
********************************

7. spacer 2.7|1158538|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

caggtcgaccgactggaggcggagattgtcgg	CRISPR spacer
caggtcgaccgactggaggcggagattgtcgg	Protospacer
********************************

8. spacer 2.8|1158599|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

tgttgtttttctgccggattaacgcggtgcga	CRISPR spacer
tgttgtttttctgccggattaacgcggtgcga	Protospacer
********************************

9. spacer 2.9|1158660|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtcgggcttgttcggcgcgggttgttaact	CRISPR spacer
ttgtcgggcttgttcggcgcgggttgttaact	Protospacer
********************************

10. spacer 2.10|1158721|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

ccagcgaaggacttgctcgtgtggttaaagcc	CRISPR spacer
ccagcgaaggacttgctcgtgtggttaaagcc	Protospacer
********************************

11. spacer 1.1|1130274|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025883 (Escherichia coli strain 503440 plasmid p503440_100, complete sequence) position: , mismatch: 1, identity: 0.969

tttgctgagtgtgcatacacacttgaacatca	CRISPR spacer
tttgcggagtgtgcatacacacttgaacatca	Protospacer
***** **************************

12. spacer 1.1|1130274|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025894 (Escherichia coli strain 503025 plasmid p503025_100, complete sequence) position: , mismatch: 1, identity: 0.969

tttgctgagtgtgcatacacacttgaacatca	CRISPR spacer
tttgcggagtgtgcatacacacttgaacatca	Protospacer
***** **************************

13. spacer 1.1|1130274|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025868 (Escherichia coli strain 504211 plasmid p504211_100, complete sequence) position: , mismatch: 1, identity: 0.969

tttgctgagtgtgcatacacacttgaacatca	CRISPR spacer
tttgcggagtgtgcatacacacttgaacatca	Protospacer
***** **************************

14. spacer 1.1|1130274|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to CP043018 (Escherichia coli strain 388808_gen plasmid unnamed3, complete sequence) position: , mismatch: 1, identity: 0.969

tttgctgagtgtgcatacacacttgaacatca	CRISPR spacer
tttgctgagtgcgcatacacacttgaacatca	Protospacer
***********.********************

15. spacer 1.1|1130274|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023851 (Escherichia coli strain 4/0 plasmid p4_0.2, complete sequence) position: , mismatch: 1, identity: 0.969

tttgctgagtgtgcatacacacttgaacatca	CRISPR spacer
tttgcggagtgtgcatacacacttgaacatca	Protospacer
***** **************************

16. spacer 1.1|1130274|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP017612 (Escherichia coli strain 20Ec-P-124 plasmid pMRY16-002_2, complete sequence) position: , mismatch: 1, identity: 0.969

tttgctgagtgtgcatacacacttgaacatca	CRISPR spacer
tttgctgagtgcgcatacacacttgaacatca	Protospacer
***********.********************

17. spacer 1.1|1130274|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025870 (Escherichia coli strain 503829 plasmid p503829_100, complete sequence) position: , mismatch: 1, identity: 0.969

tttgctgagtgtgcatacacacttgaacatca	CRISPR spacer
tttgcggagtgtgcatacacacttgaacatca	Protospacer
***** **************************

18. spacer 1.1|1130274|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028430 (Escherichia coli strain RM9131 plasmid pRM9131-1, complete sequence) position: , mismatch: 1, identity: 0.969

tttgctgagtgtgcatacacacttgaacatca	CRISPR spacer
tttgctgagtgcgcatacacacttgaacatca	Protospacer
***********.********************

19. spacer 1.1|1130274|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053233 (Escherichia coli strain SCU-306 plasmid pSCU-306-2, complete sequence) position: , mismatch: 1, identity: 0.969

tttgctgagtgtgcatacacacttgaacatca	CRISPR spacer
tttgctgagtgcgcatacacacttgaacatca	Protospacer
***********.********************

20. spacer 1.1|1130274|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019013 (Escherichia coli strain Ecol_AZ162 plasmid pECAZ162_2, complete sequence) position: , mismatch: 1, identity: 0.969

tttgctgagtgtgcatacacacttgaacatca	CRISPR spacer
tttgcggagtgtgcatacacacttgaacatca	Protospacer
***** **************************

21. spacer 1.1|1130274|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to CP025897 (Escherichia coli strain 500465 plasmid p500465_152, complete sequence) position: , mismatch: 1, identity: 0.969

tttgctgagtgtgcatacacacttgaacatca	CRISPR spacer
tttgcggagtgtgcatacacacttgaacatca	Protospacer
***** **************************

22. spacer 1.1|1130274|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019027 (Escherichia coli strain Ecol_881 plasmid pEC881_2, complete sequence) position: , mismatch: 1, identity: 0.969

tttgctgagtgtgcatacacacttgaacatca	CRISPR spacer
tttgcggagtgtgcatacacacttgaacatca	Protospacer
***** **************************

23. spacer 1.1|1130274|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019002 (Escherichia coli strain Ecol_AZ155 plasmid pECAZ155_2, complete sequence) position: , mismatch: 1, identity: 0.969

tttgctgagtgtgcatacacacttgaacatca	CRISPR spacer
tttgctgagtgcgcatacacacttgaacatca	Protospacer
***********.********************

24. spacer 1.1|1130274|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028433 (Escherichia coli strain RM9975 plasmid pRM9975-1, complete sequence) position: , mismatch: 1, identity: 0.969

tttgctgagtgtgcatacacacttgaacatca	CRISPR spacer
tttgctgagtgcgcatacacacttgaacatca	Protospacer
***********.********************

25. spacer 1.1|1130274|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012114 (Escherichia coli strain PSUO78 plasmid pPSUO78_2, complete sequence) position: , mismatch: 1, identity: 0.969

tttgctgagtgtgcatacacacttgaacatca	CRISPR spacer
tttgcggagtgtgcatacacacttgaacatca	Protospacer
***** **************************

26. spacer 1.1|1130274|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to MK972693 (Salmonella phage SI23, complete genome) position: , mismatch: 1, identity: 0.969

tttgctgagtgtgcatacacacttgaacatca	CRISPR spacer
tttgcggagtgtgcatacacacttgaacatca	Protospacer
***** **************************

27. spacer 1.1|1130274|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to MK770415 (Salmonella phage SF11, complete genome) position: , mismatch: 1, identity: 0.969

tttgctgagtgtgcatacacacttgaacatca	CRISPR spacer
tttgcggagtgtgcatacacacttgaacatca	Protospacer
***** **************************

28. spacer 1.1|1130274|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to MK972694 (Salmonella phage SE22, complete genome) position: , mismatch: 1, identity: 0.969

tttgctgagtgtgcatacacacttgaacatca	CRISPR spacer
tttgcggagtgtgcatacacacttgaacatca	Protospacer
***** **************************

29. spacer 1.1|1130274|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to MK770414 (Salmonella phage SE16, complete genome) position: , mismatch: 1, identity: 0.969

tttgctgagtgtgcatacacacttgaacatca	CRISPR spacer
tttgcggagtgtgcatacacacttgaacatca	Protospacer
***** **************************

30. spacer 1.1|1130274|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to MK972686 (Salmonella phage SF3, complete genome) position: , mismatch: 1, identity: 0.969

tttgctgagtgtgcatacacacttgaacatca	CRISPR spacer
tttgcggagtgtgcatacacacttgaacatca	Protospacer
***** **************************

31. spacer 1.1|1130274|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to MK972685 (Salmonella phage SE10, complete genome) position: , mismatch: 1, identity: 0.969

tttgctgagtgtgcatacacacttgaacatca	CRISPR spacer
tttgcggagtgtgcatacacacttgaacatca	Protospacer
***** **************************

32. spacer 1.1|1130274|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to MK972687 (Salmonella phage SE1 (in:P22virus), complete genome) position: , mismatch: 1, identity: 0.969

tttgctgagtgtgcatacacacttgaacatca	CRISPR spacer
tttgcggagtgtgcatacacacttgaacatca	Protospacer
***** **************************

33. spacer 1.1|1130274|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to MT740315 (Escherichia phage JEP4, complete genome) position: , mismatch: 1, identity: 0.969

tttgctgagtgtgcatacacacttgaacatca	CRISPR spacer
tttgcggagtgtgcatacacacttgaacatca	Protospacer
***** **************************

34. spacer 1.1|1130274|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to MK972692 (Salmonella phage SE21, complete genome) position: , mismatch: 1, identity: 0.969

tttgctgagtgtgcatacacacttgaacatca	CRISPR spacer
tttgcggagtgtgcatacacacttgaacatca	Protospacer
***** **************************

35. spacer 1.1|1130274|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to MF356679 (Escherichia phage D6, complete genome) position: , mismatch: 1, identity: 0.969

tttgctgagtgtgcatacacacttgaacatca	CRISPR spacer
tttgctgagtgcgcatacacacttgaacatca	Protospacer
***********.********************

36. spacer 3.1|1618293|36|NZ_CP040263|CRISPRCasFinder matches to NC_016160 (Escherichia phage HK75, complete genome) position: , mismatch: 1, identity: 0.972

acggttgtccaacgcaaacaccagtaatggtgcggc	CRISPR spacer
acggttgtccaacgcaaacaccagtaatggcgcggc	Protospacer
******************************.*****

37. spacer 3.1|1618293|36|NZ_CP040263|CRISPRCasFinder matches to NC_019705 (Enterobacteria phage mEpX2, complete genome) position: , mismatch: 1, identity: 0.972

acggttgtccaacgcaaacaccagtaatggtgcggc	CRISPR spacer
acggttgtccaacgcaaacaccagtaatggcgcggc	Protospacer
******************************.*****

38. spacer 3.1|1618293|36|NZ_CP040263|CRISPRCasFinder matches to NC_019769 (Enterobacteria phage HK542, complete genome) position: , mismatch: 1, identity: 0.972

acggttgtccaacgcaaacaccagtaatggtgcggc	CRISPR spacer
acagttgtccaacgcaaacaccagtaatggtgcggc	Protospacer
**.*********************************

39. spacer 3.1|1618293|36|NZ_CP040263|CRISPRCasFinder matches to NC_019719 (Enterobacteria phage HK633, complete genome) position: , mismatch: 1, identity: 0.972

acggttgtccaacgcaaacaccagtaatggtgcggc	CRISPR spacer
acggttgtccaacgcaaacaccagtaatggcgcggc	Protospacer
******************************.*****

40. spacer 3.1|1618293|36|NZ_CP040263|CRISPRCasFinder matches to JF974339 (Enterobacteria phage IME10, complete genome) position: , mismatch: 1, identity: 0.972

acggttgtccaacgcaaacaccagtaatggtgcggc	CRISPR spacer
acggttgtccaacgcaaacaccagtaatggcgcggc	Protospacer
******************************.*****

41. spacer 5.1|3141941|40|NZ_CP040263|CRISPRCasFinder matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 1, identity: 0.975

gcgctgcgggtcatttttgaaattacccccgctgtgctgt	CRISPR spacer
gcgctgcgggtcattcttgaaattacccccgctgtgctgt	Protospacer
***************.************************

42. spacer 1.11|1130884|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to KT898133 (Aeromonas phage phiARM81ld, complete genome) position: , mismatch: 2, identity: 0.938

gacgatgagacgccctggtgtgccgcgttcgt	CRISPR spacer
gacgacgagacgccctggtgcgccgcgttcgt	Protospacer
*****.**************.***********

43. spacer 3.1|1618293|36|NZ_CP040263|CRISPRCasFinder matches to NC_019715 (Enterobacterial phage mEp234, complete genome) position: , mismatch: 2, identity: 0.944

acggttgtccaacgcaaacaccagtaatggtgcggc	CRISPR spacer
acggttgtccaacgcaaacaccagtaatggcgcgga	Protospacer
******************************.**** 

44. spacer 3.1|1618293|36|NZ_CP040263|CRISPRCasFinder matches to NC_019768 (Enterobacteria phage HK106, complete genome) position: , mismatch: 2, identity: 0.944

acggttgtccaacgcaaacaccagtaatggtgcggc	CRISPR spacer
acggttgtccaacgcaaacaccagtaatggcgcgga	Protospacer
******************************.**** 

45. spacer 3.1|1618293|36|NZ_CP040263|CRISPRCasFinder matches to NC_019711 (Enterobacteria phage HK629, complete genome) position: , mismatch: 2, identity: 0.944

acggttgtccaacgcaaacaccagtaatggtgcggc	CRISPR spacer
acggttgtccaacgcaaacaccagtaatggcgcgtc	Protospacer
******************************.*** *

46. spacer 3.1|1618293|36|NZ_CP040263|CRISPRCasFinder matches to KY979108 (Escherichia phage ECP1, complete genome) position: , mismatch: 2, identity: 0.944

acggttgtccaacgcaaacaccagtaatggtgcggc	CRISPR spacer
acagttgtccaacgcaaacaccagtaatggcgcggc	Protospacer
**.***************************.*****

47. spacer 3.1|1618293|36|NZ_CP040263|CRISPRCasFinder matches to NC_005344 (Enterobacteria phage Sf6, complete genome) position: , mismatch: 2, identity: 0.944

acggttgtccaacgcaaacaccagtaatggtgcggc	CRISPR spacer
acgtttgtccaacgcaaacaccagtaatggcgcggc	Protospacer
*** **************************.*****

48. spacer 4.1|2445111|38|NZ_CP040263|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 2, identity: 0.947

cggacgcaggatggtgcgttcaattggactcgaaccaa	CRISPR spacer
cagacgcagaatggtgcgttcaattggactcgaaccaa	Protospacer
*.*******.****************************

49. spacer 2.5|1158416|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to MN855767 (Bacteriophage sp. isolate 11, complete genome) position: , mismatch: 5, identity: 0.844

gtcaactggcaccacaggatgatggcggcgaa	CRISPR spacer
gttaactggcaccacaagatgatggcggcttc	Protospacer
**.*************.************   

50. spacer 3.1|1618293|36|NZ_CP040263|CRISPRCasFinder matches to MN855766 (Bacteriophage sp. isolate 10, complete genome) position: , mismatch: 5, identity: 0.861

acggttgtccaacgcaaacaccagtaatggtgcggc	CRISPR spacer
acggttgtccaacgaaaacaccagtaatgacgcacc	Protospacer
************** **************..**. *

51. spacer 1.2|1130335|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006570 (Sodalis praecaptivus strain HS1 plasmid pHS1, complete sequence) position: , mismatch: 6, identity: 0.812

gccagcggcgctgagtacgacgacctgattaa	CRISPR spacer
gaccgaggcgcagagaacgacgacctgattat	Protospacer
* * * ***** *** *************** 

52. spacer 2.7|1158538|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to NC_013855 (Azospirillum sp. B510 plasmid pAB510a, complete sequence) position: , mismatch: 6, identity: 0.812

caggtcgaccgactggaggcggagattgtcgg-	CRISPR spacer
ccggtcgacccgctggaggcggaga-tgtagac	Protospacer
* ******** .************* *** *. 

53. spacer 2.9|1158660|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045381 (Labrenzia sp. THAF35 plasmid pTHAF35_a, complete sequence) position: , mismatch: 6, identity: 0.812

ttgtcgggcttgttcggcgcgggttgttaact-	CRISPR spacer
ttgtcggtcatgttcggcgcgggct-tcaacga	Protospacer
******* * *************.* *.***  

54. spacer 2.9|1158660|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019631 (Labrenzia aggregata strain RMAR6-6 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

ttgtcgggcttgttcggcgcgggttgttaact-	CRISPR spacer
ttgtcggtcatgttcggcgcgggct-tcaacga	Protospacer
******* * *************.* *.***  

55. spacer 1.2|1130335|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047145 (Streptomyces sp. HF10 plasmid plas1, complete sequence) position: , mismatch: 7, identity: 0.781

gccagcggcgctgagtacgacgac--ctgattaa	CRISPR spacer
gccagcggcgcggactacgacgacatccggct--	Protospacer
*********** ** *********  *.*..*  

56. spacer 2.2|1158233|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP036405 (Komagataeibacter saccharivorans strain JH1 plasmid p221732, complete sequence) position: , mismatch: 7, identity: 0.781

attttcgcagcgggtaaccgcgcccggcgatc	CRISPR spacer
cgtgacgcagcgggcagccgcgcccggcgata	Protospacer
  *  *********.*.************** 

57. spacer 2.2|1158233|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023037 (Komagataeibacter saccharivorans strain CV1 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

attttcgcagcgggtaaccgcgcccggcgatc	CRISPR spacer
cgtgacgcagcgggcagccgcgcccggcgata	Protospacer
  *  *********.*.************** 

58. spacer 2.5|1158416|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP017656 (Sphingobium cloacae strain JCM 10874 plasmid pSCLO_2, complete sequence) position: , mismatch: 7, identity: 0.781

gtcaactggcaccacaggatgatggcggcgaa	CRISPR spacer
atggacatgcaccagaagatgatggcggcgaa	Protospacer
.* .**  ****** *.***************

59. spacer 2.9|1158660|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050254 (Orbus sp. IPMB12 plasmid pIPMB12, complete sequence) position: , mismatch: 7, identity: 0.781

ttgtcgggcttgttcggcgcgggttgttaact	CRISPR spacer
ttagtgagcttgttcggcgggggtttttaaca	Protospacer
**. .*.************ ***** ***** 

60. spacer 1.1|1130274|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to MK820013 (Vibrio phage vB_VpaP_MGD2, complete genome) position: , mismatch: 8, identity: 0.75

tttgctgagtgtgcatacacacttgaacatca	CRISPR spacer
gtagctgactgtgcgtacacacttgaagtact	Protospacer
 * ***** *****.************   * 

61. spacer 1.2|1130335|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP017656 (Sphingobium cloacae strain JCM 10874 plasmid pSCLO_2, complete sequence) position: , mismatch: 8, identity: 0.75

gccagcggcgctgagtacgacgacctgattaa	CRISPR spacer
gcccgcggcgctgagtgcgacgaccatgctct	Protospacer
*** ************.********  ..*  

62. spacer 1.2|1130335|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011450 (Sphingomonas sanxanigenens DSM 19645 = NX02 plasmid pNXO2, complete sequence) position: , mismatch: 8, identity: 0.75

gccagcggcgctgagtacgacgacctgattaa	CRISPR spacer
gcccgcggcgctgagtgcgacgaccatgctct	Protospacer
*** ************.********  ..*  

63. spacer 1.9|1130762|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to MN855880 (Siphoviridae sp. isolate 369, complete genome) position: , mismatch: 8, identity: 0.75

atttttgcgcggcctgcatgaaaccagtggca	CRISPR spacer
tgttttgcggggccttcatgaaaccaggcggg	Protospacer
  ******* ***** ***********  * .

64. spacer 1.11|1130884|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to MN901520 (Halorubrum coriense virus Hardycor2, complete genome) position: , mismatch: 8, identity: 0.75

--gacgatgagacgccctggtgtgccgcgttcgt	CRISPR spacer
ccgccgcc--gacgctcgggtgtgccgcgttcgg	Protospacer
  * ** .  *****.* *************** 

65. spacer 2.1|1158172|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to MG925351 (Mycobacterium phage MPlant7149, complete genome) position: , mismatch: 8, identity: 0.75

acaatcagatcacgatcgatgcctcgcgtgag	CRISPR spacer
tccatcagatcacggccgatgcctcgggcgtc	Protospacer
 * ***********..********** *.*  

66. spacer 2.7|1158538|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016821 (Rhodococcus sp. p52 plasmid pDF01, complete sequence) position: , mismatch: 8, identity: 0.75

caggtcgaccgactggaggcggagattgtcgg	CRISPR spacer
aagatcgaccgactggaggccgagaacgcggc	Protospacer
 **.**************** **** .*. * 

67. spacer 2.7|1158538|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016821 (Rhodococcus sp. p52 plasmid pDF01, complete sequence) position: , mismatch: 8, identity: 0.75

caggtcgaccgactggaggcggagattgtcgg	CRISPR spacer
aagatcgaccgactggaggccgagaacgcggc	Protospacer
 **.**************** **** .*. * 

68. spacer 1.2|1130335|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011515 (Mitsuaria sp. 7 plasmid, complete sequence) position: , mismatch: 9, identity: 0.719

gccagcggcgctgagtacgacgacctgattaa	CRISPR spacer
gctggcggtgctgaggacgacgacctgcagcg	Protospacer
**..****.****** ***********    .

69. spacer 1.9|1130762|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016463 (Bosea sp. RAC05 plasmid pBSY19_1, complete sequence) position: , mismatch: 9, identity: 0.719

atttttgcgcggcctgcatgaaaccagtggca	CRISPR spacer
gtcattccgccgcctgcatgaaaccaggcgtc	Protospacer
.*. ** *** ****************  *. 

70. spacer 2.2|1158233|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 9, identity: 0.719

attttcgcagcgggtaaccgcgcccggcgatc	CRISPR spacer
ggtcgcgcagcgggtgaccgcgctcggcggcg	Protospacer
. *. **********.*******.*****.. 

71. spacer 2.6|1158477|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020900 (Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRphaBra5d, complete sequence) position: , mismatch: 9, identity: 0.719

caggcgctcgacgcggcacgcagtcgggcaca	CRISPR spacer
tatgcgctcgacgcagcacgccgtcgcccgtc	Protospacer
.* ***********.****** ****  *.. 

72. spacer 2.6|1158477|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013589 (Rhizobium phaseoli strain N161 plasmid pRphaN161d, complete sequence) position: , mismatch: 9, identity: 0.719

caggcgctcgacgcggcacgcagtcgggcaca	CRISPR spacer
tatgcgctcgacgcagcacgccgtcgcccgtc	Protospacer
.* ***********.****** ****  *.. 

73. spacer 2.6|1158477|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013562 (Rhizobium phaseoli strain N841 plasmid pRphaN841e, complete sequence) position: , mismatch: 9, identity: 0.719

caggcgctcgacgcggcacgcagtcgggcaca	CRISPR spacer
tatgcgctcgacgcagcacgccgtcgcccgtc	Protospacer
.* ***********.****** ****  *.. 

74. spacer 2.6|1158477|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013536 (Rhizobium phaseoli strain R650 plasmid pRphaR650d, complete sequence) position: , mismatch: 9, identity: 0.719

caggcgctcgacgcggcacgcagtcgggcaca	CRISPR spacer
tatgcgctcgacgcagcacgccgtcgcccgtc	Protospacer
.* ***********.****** ****  *.. 

75. spacer 2.6|1158477|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013546 (Rhizobium phaseoli strain R620 plasmid pRphaR620d, complete sequence) position: , mismatch: 9, identity: 0.719

caggcgctcgacgcggcacgcagtcgggcaca	CRISPR spacer
tatgcgctcgacgcagcacgccgtcgcccgtc	Protospacer
.* ***********.****** ****  *.. 

76. spacer 2.6|1158477|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to NC_010997 (Rhizobium etli CIAT 652 plasmid pC, complete sequence) position: , mismatch: 9, identity: 0.719

caggcgctcgacgcggcacgcagtcgggcaca	CRISPR spacer
tatgcgctcgacgcagcacgccgtcgcccgtc	Protospacer
.* ***********.****** ****  *.. 

77. spacer 1.2|1130335|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to MN850587 (Escherichia phage mistaenkt, complete genome) position: , mismatch: 10, identity: 0.688

gccagcggcgctgagtacgacgacctgattaa	CRISPR spacer
tctctaaaagctgtctacgacgacctgattaa	Protospacer
 *.   .. ****  *****************

78. spacer 1.2|1130335|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to MH791400 (UNVERIFIED: Escherichia phage EcSzw-2, complete genome) position: , mismatch: 10, identity: 0.688

gccagcggcgctgagtacgacgacctgattaa	CRISPR spacer
tctctaaaagctgtctacgacgacctgattaa	Protospacer
 *.   .. ****  *****************

79. spacer 1.2|1130335|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to MK562504 (Enterobacteria phage CHB7, complete genome) position: , mismatch: 10, identity: 0.688

gccagcggcgctgagtacgacgacctgattaa	CRISPR spacer
tctctaaaagctgtctacgacgacctgattaa	Protospacer
 *.   .. ****  *****************

80. spacer 1.2|1130335|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to NC_028808 (Escherichia phage SUSP1, complete genome) position: , mismatch: 10, identity: 0.688

gccagcggcgctgagtacgacgacctgattaa	CRISPR spacer
tctctaaaagctgtctacgacgacctgattaa	Protospacer
 *.   .. ****  *****************

81. spacer 1.2|1130335|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to MH791413 (UNVERIFIED: Escherichia phage EcSzw_1, complete genome) position: , mismatch: 10, identity: 0.688

gccagcggcgctgagtacgacgacctgattaa	CRISPR spacer
tctctaaaagctgtctacgacgacctgattaa	Protospacer
 *.   .. ****  *****************

82. spacer 1.2|1130335|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to NC_028935 (Escherichia phage SUSP2, complete genome) position: , mismatch: 10, identity: 0.688

gccagcggcgctgagtacgacgacctgattaa	CRISPR spacer
tctctaaaagctgtctacgacgacctgattaa	Protospacer
 *.   .. ****  *****************

83. spacer 1.3|1130396|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to MN693290 (Marine virus AFVG_25M557, complete genome) position: , mismatch: 10, identity: 0.688

tcaatacaacagcaatgctggagctggaaaaa	CRISPR spacer
ctcaagtaacatcaatgctgtagctggaaatg	Protospacer
.. * ..**** ******** ********* .

84. spacer 1.3|1130396|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to MN693243 (Marine virus AFVG_25M556, complete genome) position: , mismatch: 10, identity: 0.688

tcaatacaacagcaatgctggagctggaaaaa	CRISPR spacer
ctcaagtaacatcaatgctgtagctggaaatg	Protospacer
.. * ..**** ******** ********* .

85. spacer 1.6|1130579|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022775 (Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

agattcgcgcaatgtacggtaaagacagcacc	CRISPR spacer
cgactcgcgcaatgtccggtaaagggttgggc	Protospacer
 **.*********** ********.    . *

86. spacer 1.6|1130579|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022762 (Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

agattcgcgcaatgtacggtaaagacagcacc	CRISPR spacer
cgactcgcgcaatgtccggtaaagggttgggc	Protospacer
 **.*********** ********.    . *

87. spacer 1.6|1130579|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023017 (Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

agattcgcgcaatgtacggtaaagacagcacc	CRISPR spacer
cgactcgcgcaatgtccggtaaagggttgggc	Protospacer
 **.*********** ********.    . *

88. spacer 1.6|1130579|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014703 (Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence) position: , mismatch: 10, identity: 0.688

agattcgcgcaatgtacggtaaagacagcacc	CRISPR spacer
cgactcgcgcaatgtccggtaaagggttgggc	Protospacer
 **.*********** ********.    . *

89. spacer 1.6|1130579|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022771 (Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

agattcgcgcaatgtacggtaaagacagcacc	CRISPR spacer
cgactcgcgcaatgtccggtaaagggttgggc	Protospacer
 **.*********** ********.    . *

90. spacer 1.6|1130579|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022777 (Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

agattcgcgcaatgtacggtaaagacagcacc	CRISPR spacer
cgactcgcgcaatgtccggtaaagggttgggc	Protospacer
 **.*********** ********.    . *

91. spacer 1.6|1130579|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022799 (Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

agattcgcgcaatgtacggtaaagacagcacc	CRISPR spacer
cgactcgcgcaatgtccggtaaagggttgggc	Protospacer
 **.*********** ********.    . *

92. spacer 1.6|1130579|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022764 (Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

agattcgcgcaatgtacggtaaagacagcacc	CRISPR spacer
cgactcgcgcaatgtccggtaaagggttgggc	Protospacer
 **.*********** ********.    . *

93. spacer 1.6|1130579|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022797 (Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

agattcgcgcaatgtacggtaaagacagcacc	CRISPR spacer
cgactcgcgcaatgtccggtaaagggttgggc	Protospacer
 **.*********** ********.    . *

94. spacer 1.6|1130579|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022758 (Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

agattcgcgcaatgtacggtaaagacagcacc	CRISPR spacer
cgactcgcgcaatgtccggtaaagggttgggc	Protospacer
 **.*********** ********.    . *

95. spacer 1.8|1130701|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to MN657072 (Psychrobacter sp. strain ANT_P36 plasmid pA36P2, complete sequence) position: , mismatch: 10, identity: 0.688

tttgttttgatgatttatcagtatatgaattg	CRISPR spacer
aagattttgatgatttatcagaagatgttcag	Protospacer
   .***************** * ***  . *

96. spacer 1.9|1130762|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to NC_010625 (Paraburkholderia phymatum STM815 plasmid pBPHY01, complete sequence) position: , mismatch: 10, identity: 0.688

atttttgcgcggcctgcatgaaaccagtggca	CRISPR spacer
cgaggtgcgcagcctgcatgaaacctgtgatg	Protospacer
     *****.************** ***...

97. spacer 2.9|1158660|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to NC_013449 (Streptomyces sp. W9 plasmid pCQ3, complete sequence) position: , mismatch: 11, identity: 0.656

ttgtcgggcttgttcggcgcgggttgttaact	CRISPR spacer
gtgttgggcttgttcggcgggggtccaggcgg	Protospacer
 ***.************** ****.   .   

98. spacer 2.9|1158660|32|NZ_CP040263|PILER-CR,CRISPRCasFinder,CRT matches to NC_019307 (Streptomyces sp. W75 plasmid pCQ4, complete sequence) position: , mismatch: 11, identity: 0.656

ttgtcgggcttgttcggcgcgggttgttaact	CRISPR spacer
gtgttgggcttgttcggcgggggtccaggcgg	Protospacer
 ***.************** ****.   .   

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1140197 : 1196693 56 Escherichia_phage(42.11%) tRNA,transposase NA
DBSCAN-SWA_2 1348257 : 1390023 54 Salmonella_phage(52.27%) tail,head,integrase,terminase,holin attL 1347995:1348012|attR 1390231:1390248
DBSCAN-SWA_3 1603704 : 1649174 66 Enterobacteria_phage(59.32%) capsid,head,integrase,terminase,holin,lysis,portal attL 1608336:1608351|attR 1648106:1648121
DBSCAN-SWA_4 1895550 : 1904993 10 Enterobacteria_phage(85.71%) NA NA
DBSCAN-SWA_5 1998858 : 2006376 7 Escherichia_phage(42.86%) NA NA
DBSCAN-SWA_6 2144128 : 2200893 74 Enterobacteria_phage(81.82%) tail,plate,capsid,head,integrase,transposase,terminase,holin,portal attL 2163334:2163393|attR 2201000:2201120
DBSCAN-SWA_7 2705474 : 2769599 54 Enterobacteria_phage(35.29%) tail,transposase NA
DBSCAN-SWA_8 2773806 : 2812018 45 Escherichia_phage(56.76%) lysis,tRNA,terminase,integrase attL 2778619:2778634|attR 2821108:2821123
DBSCAN-SWA_9 3406644 : 3453826 64 Enterobacteria_phage(59.65%) tail,capsid,head,integrase,protease,terminase,lysis,portal attL 3415001:3415016|attR 3462632:3462647
DBSCAN-SWA_10 4018641 : 4091658 58 Ralstonia_phage(11.11%) protease,plate,tRNA,transposase NA
DBSCAN-SWA_11 4291072 : 4372902 101 Enterobacteria_phage(40.32%) tail,tRNA,capsid,head,integrase,terminase,holin,portal attL 4333611:4333625|attR 4374883:4374897
DBSCAN-SWA_12 4404092 : 4426352 23 Escherichia_phage(50.0%) transposase NA
DBSCAN-SWA_13 4503168 : 4533422 21 Stx2-converting_phage(42.86%) integrase,protease,transposase attL 4512993:4513052|attR 4536016:4539055
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage